BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036907
(209 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 147/223 (65%), Gaps = 37/223 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGIAMARPSSNI +RR+SGTTPT SGVGIGSE
Sbjct: 269 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSE 328
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K DKGRGG + NITI I+MERVK+PIR RGSN H
Sbjct: 329 MSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDH 388
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
PD+G DPKA+PKI+GI NVVS+N+ KAP+ GI + LAP+ KW
Sbjct: 389 PDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWH 448
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNFPNF 205
+FVSGF VFP+ CPQ+Q+ SW CL + N
Sbjct: 449 CEFVSGFTDAVFPVSCPQMQSNVSSSW--------CLDHLGNL 483
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 147/223 (65%), Gaps = 37/223 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGIAMARPSSNI +RR+SGTTPT SGVGIGSE
Sbjct: 269 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSE 328
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K DKGRGG + NITI I+MERVK+PIR RGSN H
Sbjct: 329 MSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDH 388
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
PD+G DPKA+PKI+GI NVVS+N+ KAP+ GI + LAP+ KW
Sbjct: 389 PDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWH 448
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNFPNF 205
+FVSGF VFP+ CPQ+Q+ SW CL + N
Sbjct: 449 CEFVSGFTDAVFPVSCPQMQSNVSSSW--------CLDHLGNL 483
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 144/218 (66%), Gaps = 30/218 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGI MARPSSNI +RRVSGTTPT SGVGIGSE
Sbjct: 227 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSGTTPTCSGVGIGSE 286
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K D GRGG I NITI + MERVK+PIR RGSN H
Sbjct: 287 MSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTMERVKVPIRFSRGSNDH 346
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
PDEG DPKA+P ++GIS NV+S N+ KAPV G+ + + S+ W
Sbjct: 347 PDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNVSLLGVVSSLSWH 406
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQ 200
+FVSGF +VFP PCPQLQ+ SW SY + S +
Sbjct: 407 CEFVSGFADEVFPTPCPQLQSNISSSWC-SYSWASSVN 443
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 139/209 (66%), Gaps = 29/209 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGI ARPSS+I +RRVSGTTPT SGVGIGSE
Sbjct: 270 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTTPTCSGVGIGSE 329
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K D GRGG I NIT+ I MERVKIPIR RGSN H
Sbjct: 330 MSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKIPIRFSRGSNDH 389
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
PDE DP A+P ++G+S NV+ VN+ KAPV GI + LA S W
Sbjct: 390 PDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVTLVGLASSTSWH 449
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+FVSGF ++VFP+PCPQLQN SW +
Sbjct: 450 CEFVSGFANEVFPMPCPQLQNNDSSSWCS 478
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 145/221 (65%), Gaps = 29/221 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGIAMARPSSNI +RR+SGTTPT SGVGIGSE
Sbjct: 258 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSE 317
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K DKGRGG + NITI I+MERVK+PIR RGSN H
Sbjct: 318 MSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDH 377
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
PD+ DPKA+PKI+GI NVVS+N+ KAP+ GI + LAP+ KW
Sbjct: 378 PDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAAKWH 437
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNFP 203
+FVSGF VFP+ CPQ+Q+ V P + N P
Sbjct: 438 CEFVSGFTDAVFPVSCPQMQSNEATVMVIEQPNFADATNSP 478
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 140/211 (66%), Gaps = 29/211 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGI +ARPSSNI +RRVSGTTPT SGVGIGSE
Sbjct: 122 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSE 181
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D+GRGG I N++I M RVK+ IR RGSN H
Sbjct: 182 MSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDH 241
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAG---------------IIVLAPSVKWQ 162
PDE DPKA+PK++GI N++S+N+ KAPV G I+ L PS KW
Sbjct: 242 PDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSAKWH 301
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTSY 193
FVSGF++ VFP PCPQLQN T S +S+
Sbjct: 302 CAFVSGFSTSVFPTPCPQLQNTTFSSLCSSF 332
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 137/202 (67%), Gaps = 33/202 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGI MARPSSNI +RRVSGTTPT SGVGIGSE
Sbjct: 193 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTTPTCSGVGIGSE 252
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K DKGRGG I NITI I MERVKIPIR GSN H
Sbjct: 253 MSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKIPIRFSSGSNDH 312
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-----------------IVLAPSVK 160
PDE DPKA+P ++G+S N+VS N+ KAPV GI +V +PS
Sbjct: 313 PDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNISLLGVVSSPS-- 370
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W+ +FVSGF + VFP PCPQLQ
Sbjct: 371 WRCEFVSGFANDVFPTPCPQLQ 392
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 140/211 (66%), Gaps = 29/211 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YGI +ARPSSNI +RRVSGTTPT SGVGIGSE
Sbjct: 262 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSE 321
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D+GRGG I N++I M RVK+ IR RGSN H
Sbjct: 322 MSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDH 381
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAG---------------IIVLAPSVKWQ 162
PDE DPKA+PK++GI N++S+N+ KAPV G I+ L PS KW
Sbjct: 382 PDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSAKWH 441
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTSY 193
FVSGF++ VFP PCPQLQN T S +S+
Sbjct: 442 CAFVSGFSTSVFPTPCPQLQNTTFSSLCSSF 472
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 145/210 (69%), Gaps = 29/210 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIED YIESG+DLVA+K GW+HYGI MA PS+NI +RR+SGTTPT SGVGIGSE
Sbjct: 267 DSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTTPTCSGVGIGSE 326
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K DKGRGG I N++I I+MERVKIPIR RGSN H
Sbjct: 327 MSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKIPIRFSRGSNDH 386
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVL---APSVKWQ 162
PD+G DPKA+P+ + I NVVSVN+ KAPV G+ I L A S +W+
Sbjct: 387 PDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLHGVALSARWR 446
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVTS 192
++VSGF ++VFP+PCP+L+N + SW ++
Sbjct: 447 CEYVSGFATEVFPVPCPELRNNSYSSWCSA 476
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 137/201 (68%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIED YIESG+DLVA+K GW+ YGIA+A+PS+NI + RVSGTTPT SGVGIGSE
Sbjct: 268 DSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCSGVGIGSE 327
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I+N++I I+MERVKIPIR RGSN H
Sbjct: 328 MSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSNDH 387
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
PD+G DPKA+P+ + I NV+SVN+ KAPV G+ + +A S W
Sbjct: 388 PDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFLGVALSATWH 447
Query: 163 SQFVSGFNSQVFPLPCPQLQN 183
++V+GF + VFPLPCP+LQN
Sbjct: 448 CEYVAGFTNGVFPLPCPELQN 468
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 134/202 (66%), Gaps = 29/202 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YG+A+ARPSSNI +RR+SGTT T SGVGIGSE
Sbjct: 251 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSE 310
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K DKGRGG I NIT + +E+VK+PIR GSN H
Sbjct: 311 MSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDH 370
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
D+ DPKALP+++GI NVVS+N+ KAP+ G+ + L + KW+
Sbjct: 371 SDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKWK 430
Query: 163 SQFVSGFNSQVFPLPCPQLQNK 184
+ VSG+ S VFPL CPQL K
Sbjct: 431 CKDVSGYASDVFPLSCPQLLQK 452
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 134/202 (66%), Gaps = 29/202 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YG+A+ARPSSNI +RR+SGTT T SGVGIGSE
Sbjct: 264 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSE 323
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K DKGRGG I NIT + +E+VK+PIR GSN H
Sbjct: 324 MSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDH 383
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
D+ DPKALP+++GI NVVS+N+ KAP+ G+ + L + KW+
Sbjct: 384 SDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKWK 443
Query: 163 SQFVSGFNSQVFPLPCPQLQNK 184
+ VSG+ S VFPL CPQL K
Sbjct: 444 CKDVSGYASDVFPLSCPQLLQK 465
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 134/202 (66%), Gaps = 29/202 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DL+AVK GW+ YG+A+ARPSSNI +RR+SGTT T SGVGIGSE
Sbjct: 264 DSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSE 323
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K DKGRGG I NIT + +E+VK+PIR GSN H
Sbjct: 324 MSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDH 383
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
D+ DPKALP+++GI NVVS+N+ KAP+ G+ + L + KW+
Sbjct: 384 SDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPQTEKWK 443
Query: 163 SQFVSGFNSQVFPLPCPQLQNK 184
+ VSG+ S VFPL CPQL K
Sbjct: 444 CKDVSGYASDVFPLSCPQLLQK 465
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 124/201 (61%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI++ +PSSNI ++RVSGTTPT SGVG GSE
Sbjct: 86 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 145
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI + ME+VK+PIR RGS+ H
Sbjct: 146 MSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDH 205
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP--------VRAGII-------VLAPSVKWQ 162
D+ D ALP I GI V++V V+ +AP V GI + V+WQ
Sbjct: 206 SDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVRWQ 265
Query: 163 SQFVSGFNSQVFPLPCPQLQN 183
+ V G +VFP PC +L+N
Sbjct: 266 CESVYGEAHEVFPAPCEELRN 286
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 124/201 (61%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI++ +PSSNI ++RVSGTTPT SGVG GSE
Sbjct: 271 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 330
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI + ME+VK+PIR RGS+ H
Sbjct: 331 MSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDH 390
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP--------VRAGII-------VLAPSVKWQ 162
D+ D ALP I GI V++V V+ +AP V GI + V+WQ
Sbjct: 391 SDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVRWQ 450
Query: 163 SQFVSGFNSQVFPLPCPQLQN 183
+ V G +VFP PC +L+N
Sbjct: 451 CESVYGEAHEVFPAPCEELRN 471
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 120/209 (57%), Gaps = 31/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI+ +PS+NI ++RVSGTTPT SGVG GSE
Sbjct: 281 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGTTPTCSGVGFGSE 340
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI + ME+VK+PIR RG++ H
Sbjct: 341 MSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVKVPIRFSRGADDH 400
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-----------------IVLAPSVK 160
PD+ DP ALP+I + +VV V+ +AP+ + I +
Sbjct: 401 PDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNFSFRGIRRQQDSR 460
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRFSW 189
W + V G VFP PC + + SW
Sbjct: 461 WHCESVYGEAHDVFPAPCEEFRRDGSSSW 489
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 120/207 (57%), Gaps = 29/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI++ +PSSNI ++RVSGTTPT SGVG GSE
Sbjct: 272 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 331
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI ++ME+VK+PIR RG++ H
Sbjct: 332 MSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDH 391
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
D+ D ALPKI + +VV V+ +AP+ + V+ +W
Sbjct: 392 SDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWH 451
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSW 189
+ V G V P PC + + SW
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSSW 478
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 120/207 (57%), Gaps = 29/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI++ +PSSNI ++RVSGTTPT SGVG GSE
Sbjct: 272 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 331
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI ++ME+VK+PIR RG++ H
Sbjct: 332 MSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDH 391
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
D+ D ALPKI + +VV V+ +AP+ + V+ +W
Sbjct: 392 SDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWH 451
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSW 189
+ V G V P PC + + SW
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSSW 478
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 120/207 (57%), Gaps = 29/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI++ +PSSNI ++RVSGTTPT SGVG GSE
Sbjct: 272 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSE 331
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI ++ME+VK+PIR RG++ H
Sbjct: 332 MSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDH 391
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI---------------IVLAPSVKWQ 162
D+ D ALPKI + +VV V+ +AP+ + V+ +W
Sbjct: 392 SDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRWH 451
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSW 189
+ V G V P PC + + SW
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSSW 478
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 120/211 (56%), Gaps = 37/211 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ VCIEDCYIESG+DLVAVK GW+ YGI++ +PS+NI ++RVSGTTPT SGVG GSE
Sbjct: 287 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTPTCSGVGFGSE 346
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K D GRGG I NITI + ME+VK+PIR RG++ H
Sbjct: 347 MSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIRFSRGADDH 406
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSV------------------ 159
D+ D ALP+I + +VV V+ +AP+ + P
Sbjct: 407 SDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAV----PGAVYEEICFRNFSLRGIRRQ 462
Query: 160 -KWQSQFVSGFNSQVFPLPCPQLQNKTRFSW 189
+W + V G +VFP PC + + SW
Sbjct: 463 DRWHCESVYGEAHEVFPAPCEEFRKNGSSSW 493
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 124/211 (58%), Gaps = 33/211 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S++VCIEDCYIESG+DLVA+K GW+ YGI++ +PS+NI ++RVSGTTPT SGVGIGSE
Sbjct: 271 DSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIIIQRVSGTTPTCSGVGIGSE 330
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG ++N+ R K D GRGG + N+T+ + MERVK+PIR RGS+ H
Sbjct: 331 MSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANVTMERVKVPIRFSRGSDDH 390
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------------------IVLAPS 158
D+ D ALP I + V++V V+ +AP+ + V
Sbjct: 391 SDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEGICFRNVSLRLREEVRRRH 450
Query: 159 VKWQSQFVSGFNSQVFPLPCPQLQNKTRFSW 189
WQ + V G VFP C +L++ SW
Sbjct: 451 AGWQCESVYGEAHGVFPEACEELRHNGSSSW 481
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 116/208 (55%), Gaps = 32/208 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPSS+IT+RR++G++P ++G+ IGSE
Sbjct: 235 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGIAIGSE 293
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I+NIT+ ++ ME + IRI H
Sbjct: 294 TSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII----------------VLAPSV-K 160
PD+ D ALP ++G++ NV + ++A + G+ V P
Sbjct: 354 PDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPP 413
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRFS 188
W+ VSGF QV P PC +L + + S
Sbjct: 414 WKCSDVSGFAHQVSPWPCSELSSNQQGS 441
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 32/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPS IT+RRV+G++P ++G+ IGSE
Sbjct: 233 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVTGSSP-FAGIAIGSE 291
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I+NIT+ ++ +E + I+I H
Sbjct: 292 TSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP----------SVK 160
PDE +P ALP ++GI+ NV V +A + G+ + L+ S
Sbjct: 352 PDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDINFHGMEGPRSPS 411
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W+ V GF QV P PC QL ++
Sbjct: 412 WKCSDVFGFAHQVSPWPCSQLSSQ 435
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 105/201 (52%), Gaps = 28/201 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDCYI +G+DL+A+K GW+ YGIA RPS+NI + R+ G T T +G+ IGSE
Sbjct: 235 DSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K GRGG + NI + + + V I IR H
Sbjct: 295 MSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ DP ALP I I+ +V+ N KA + GI + ++ + W
Sbjct: 355 PDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLNVSSNYPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
+ G++ VFP C L+ +
Sbjct: 415 SNIRGYSDMVFPEACEPLKER 435
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 107/199 (53%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+D+V +K GW+ YGI+ A PSSNI++R ++G T +G+ GSE
Sbjct: 205 DSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSE 264
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++NI I + M+ V I IRI H
Sbjct: 265 MSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEH 324
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-------PSVKWQS 163
PD+ D ALP I I+ NVV VN A + GI I L+ + W
Sbjct: 325 PDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNC 384
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ GF++ V P C QL+
Sbjct: 385 SLIEGFSNSVAPEICEQLR 403
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 107/199 (53%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+D+V +K GW+ YGI+ A PSSNI++R ++G T +G+ GSE
Sbjct: 265 DSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSE 324
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++NI I + M+ V I IRI H
Sbjct: 325 MSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEH 384
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-------PSVKWQS 163
PD+ D ALP I I+ NVV VN A + GI I L+ + W
Sbjct: 385 PDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNC 444
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ GF++ V P C QL+
Sbjct: 445 SLIEGFSNSVAPEICEQLR 463
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 109/199 (54%), Gaps = 29/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDCYI +G+D++A+K GW+ YGI+ RPS NI +RR+ G T + SG+ IGSE
Sbjct: 74 DSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIGETHS-SGIAIGSE 132
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN+ R K GRGG + NI I + + VK+ IR H
Sbjct: 133 MSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVKVAIRFTGRYGEH 192
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPS--VKWQS 163
PDE DPKA+PKI I+F ++ N A + GI I L+ + W
Sbjct: 193 PDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNITLSVNSISPWNC 252
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
V GF+S VFP C L+
Sbjct: 253 SNVQGFSSLVFPQTCELLE 271
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 32/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPS IT+RR++G++P ++G+ IGSE
Sbjct: 265 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRLTGSSP-FAGIAIGSE 323
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I+NIT+ ++ +E + I+I H
Sbjct: 324 TSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGH 383
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP----------SVK 160
PDE +P ALP ++GI+ NV V +A + G+ + L+ S
Sbjct: 384 PDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNINFHGMRGPRSPS 443
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W+ V GF QV P PC QL ++
Sbjct: 444 WKCSDVFGFAHQVSPWPCSQLSSQ 467
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+DL+A+K GW+ YG+A RPSS+IT+RR++G++P ++G +GSE
Sbjct: 51 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSE 109
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I N+T+ + ++ V+ +RI H
Sbjct: 110 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 169
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPS------VK---------WQ 162
PD+ D ALP + G++ NV N +A GI A S VK W+
Sbjct: 170 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWK 229
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ VSG V P PC +L + + S+ T
Sbjct: 230 CEAVSGAALDVQPSPCTELTSTSGMSFCT 258
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 30/204 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPS +IT+RR++G++P ++G+ IGSE
Sbjct: 238 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSP-FAGIAIGSE 296
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG+I+ ITI + +E+V+ I+I + H
Sbjct: 297 TSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK---WQ 162
PD+ + ALP +RGI+ NV + +A + G+ + L + + W+
Sbjct: 357 PDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKRSPIWK 416
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTR 186
V G +V P PCP+L T+
Sbjct: 417 CSDVVGAADKVNPTPCPELSATTQ 440
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 111/201 (55%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED YI +G+DLVA+K GW+ YGIA RPSSNIT+RR++G++P ++G+ IGSE
Sbjct: 233 DSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP-FAGIAIGSE 291
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG I+NI I + ++ K I+I + H
Sbjct: 292 TSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNT--------IKAPVRAGIIV--------LAPSVKW 161
PDE +P ALP ++GI NV VN +K GI + L W
Sbjct: 352 PDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTW 411
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
+ VSG + +V P PC +L+
Sbjct: 412 KCSDVSGTSLKVSPWPCSELR 432
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 106/199 (53%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+D+V +K GW+ YGI+ A PSSNI++R ++G T +G+ GSE
Sbjct: 265 DSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSE 324
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++NI I + M+ V I IRI H
Sbjct: 325 MSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEH 384
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-------PSVKWQS 163
PD+ D LP I I+ NVV VN A + GI I L+ + W
Sbjct: 385 PDDNYDKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSLSSKSADPWNC 444
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
V GF++ V P C QL+
Sbjct: 445 SLVKGFSNSVAPEICEQLR 463
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+DLVA+K GW+ YGIA RPSS+IT+RR++G++P ++G +GSE
Sbjct: 238 DSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRITGSSP-FAGFAVGSE 296
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I N+T+ + ++ V+ +RI H
Sbjct: 297 TSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVRYGLRIAGDVGDH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLA---------------PSVKWQ 162
PDE + ALPK+ ++ NV N +A GI A P W+
Sbjct: 357 PDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNIKLHGSVPVRPWK 416
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ VSG + P PC +L + + S+ T
Sbjct: 417 CESVSGGALDLQPSPCTELTSTSGTSFCT 445
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+DL+A+K GW+ YG+A RPSS+IT+RR++G++P ++G +GSE
Sbjct: 98 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSE 156
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I N+T+ + ++ V+ +RI H
Sbjct: 157 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 216
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPS------VK---------WQ 162
PD+ D ALP + G++ NV N +A GI A S VK W+
Sbjct: 217 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWK 276
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ VSG V P PC +L + + S+ T
Sbjct: 277 CEAVSGAALDVQPSPCTELTSTSGMSFCT 305
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 114/209 (54%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+DL+A+K GW+ YGIA RPSS+IT+RR++G++P ++G +GSE
Sbjct: 240 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGFSVGSE 298
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I NIT+ + ++ V+ +RI H
Sbjct: 299 TSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGH 358
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL--------APSVKWQ 162
PDE + ALP + + NV N +A + GI I L AP W+
Sbjct: 359 PDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSAPVRPWK 418
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
Q VSG V P PC +L + + S+ T
Sbjct: 419 CQAVSGGALDVQPSPCTELTSMSGMSFCT 447
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 114/209 (54%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+DL+A+K GW+ YGIA RPSS+IT+RR++G++P ++G +GSE
Sbjct: 240 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP-FAGFSVGSE 298
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I NIT+ + ++ V+ +RI H
Sbjct: 299 TSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGH 358
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL--------APSVKWQ 162
PDE + ALP + + NV N +A + GI I L AP W+
Sbjct: 359 PDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSAPVRPWK 418
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
Q VSG V P PC +L + + S+ T
Sbjct: 419 CQAVSGGALDVQPSPCTELTSMSGMSFCT 447
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 107/202 (52%), Gaps = 27/202 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCI DCYI +G+DL+++K GW+ +GI PS+N+ + VSG +PT +G+ GSE
Sbjct: 254 DSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSE 313
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG I NI+I +++E V + H
Sbjct: 314 MSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGH 373
Query: 118 PDEGRDPKALPKIRGISFVNVVS---------VNTIKAPVR----AGIIVLAPSVKWQSQ 164
PD+G DP+ALP IRGIS +VV +AP R A + + + W
Sbjct: 374 PDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGAGAWNCS 433
Query: 165 FVSGFNSQVFPLPCPQLQNKTR 186
GF+ +V P PC +L K +
Sbjct: 434 NTYGFSERVVPSPCLELDRKQQ 455
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 30/204 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA PS +IT+RR++G++P ++G+ IGSE
Sbjct: 238 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSP-FAGIAIGSE 296
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG+I+ ITI + +E+V+ I+I + H
Sbjct: 297 TSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK---WQ 162
PD+ + ALP +RGI+ NV + +A + G+ + L + W+
Sbjct: 357 PDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTKSTPIWK 416
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTR 186
V G S+V P PCP+L T+
Sbjct: 417 CSDVVGAASKVNPTPCPELTTTTQ 440
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIEDCYI +G+DL+A+K GW+ YG+A RPSS+IT+RR++G++P ++G +GSE
Sbjct: 235 DSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGSE 293
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I N+T+ + ++ V+ +RI H
Sbjct: 294 TSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPS------VK---------WQ 162
PD+ D ALP + G++ NV N +A GI A S VK W+
Sbjct: 354 PDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWK 413
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ VSG V P PC +L + + S+ T
Sbjct: 414 CEAVSGAALDVQPSPCTELTSTSGMSFCT 442
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 106/199 (53%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCY+ +G+D++ +K GW+ YGI+ A PSSNI++R ++G T +G+ GSE
Sbjct: 245 DSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSE 304
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++N+ + + + V I IRI H
Sbjct: 305 MSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+G D ALP I I+ +VV VN A + GI + + + W
Sbjct: 365 PDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVRSTDPWNC 424
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
V G++S V P C QL+
Sbjct: 425 SLVEGYSSSVSPEVCEQLR 443
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 111/203 (54%), Gaps = 32/203 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI +G+DLV++K GW+ YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN+ R K GRGG + N+ I +K++ VK IR H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVS--------VNTIKAPVRAGIIVLAPSVK--------- 160
PDE DPKALP I I+F NV + I+ V I L +++
Sbjct: 355 PDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSP 414
Query: 161 WQSQFVSGFNSQVFP-LPCPQLQ 182
W+ V G++ V P + C L+
Sbjct: 415 WECSNVRGYSQWVSPEITCDSLK 437
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 111/203 (54%), Gaps = 32/203 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI +G+DLV++K GW+ YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 234 DSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 293
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN+ R K GRGG + N+ I +K++ VK IR H
Sbjct: 294 MSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVS--------VNTIKAPVRAGIIVLAPSVK--------- 160
PDE DPKALP I I+F NV + I+ V I L +++
Sbjct: 354 PDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSP 413
Query: 161 WQSQFVSGFNSQVFP-LPCPQLQ 182
W+ V G++ V P + C L+
Sbjct: 414 WECSNVRGYSQWVSPEITCDSLK 436
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 30/212 (14%)
Query: 9 HYTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
H S+NVCIEDCYI +G+DL+A+K GW+ YG+A RPSS+IT+RR++G++P ++G +
Sbjct: 206 HPVYCSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAV 264
Query: 69 GSEMSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE SGG+ F K + GRGG I N+T+ + ++ V+ +RI
Sbjct: 265 GSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDV 324
Query: 115 NSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPS------VK-------- 160
HPD+ D ALP + G++ NV N +A GI A S VK
Sbjct: 325 GGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVR 384
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
W+ + VSG V P PC +L + + S+ T
Sbjct: 385 PWKCEAVSGAALDVQPSPCTELTSTSGMSFCT 416
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 113/206 (54%), Gaps = 32/206 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED YI +G+DLVAVK GW+ YGIA R S +IT+RR+SG++P ++GV +GSE
Sbjct: 233 DSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSP-FAGVAVGSE 291
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I+NIT+ + ME + ++I + H
Sbjct: 292 ASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP----------SVK 160
PD+ DP ALP ++ I+ N+ VN +A G+ I L+ SV
Sbjct: 352 PDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVP 411
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTR 186
W +VSG S V P PC +L + +
Sbjct: 412 WTCSYVSGAASLVSPWPCSELTSTDQ 437
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 90/141 (63%), Gaps = 14/141 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI +G+DLV++K GW+ YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN+ R K GRGG + N+ I +K++ VK IR H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNV 138
PDE DPKALP I I+F NV
Sbjct: 355 PDEKFDPKALPAIEKITFENV 375
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 109/199 (54%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI +G+D+V +K GW+ YGI+ A PSSNI+++ ++G T + +G+ +GSE
Sbjct: 236 DSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSE 295
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG ++N+ I + M+ V I IRI H
Sbjct: 296 MSGGISNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP---SVK----WQS 163
PD+ D ALP I I+ NV+ N A + GI I L+ S K W
Sbjct: 356 PDDKYDKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTLSTKSMDPWNC 415
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
V G+++ V P C +L+
Sbjct: 416 SLVEGYSNSVSPEICEELR 434
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 110/201 (54%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED YI +G+DLVA+K GW+ YGIA RPSSNIT+RR++G++P ++G+ IGSE
Sbjct: 233 DSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP-FAGIAIGSE 291
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG I+NI I + ++ K I+I + H
Sbjct: 292 TSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNT--------IKAPVRAGIIV--------LAPSVKW 161
PDE +P ALP ++GI NV VN +K GI + L W
Sbjct: 352 PDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTW 411
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
+ V G + +V P PC +L+
Sbjct: 412 KCSDVIGTSLKVSPWPCSELR 432
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 116/221 (52%), Gaps = 39/221 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED YI +G+DLVA+K GW+ YGIA RPSSNIT+RR++G++P ++G+ IGSE
Sbjct: 233 DSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP-FAGIAIGSE 291
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG I+NI I + ++ K I+I + H
Sbjct: 292 TSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNT--------IKAPVRAGIIV--------LAPSVKW 161
PDE +P ALP ++GI NV VN +K GI + L W
Sbjct: 352 PDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTW 411
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNF 202
+ V G + +V P PC +L+ T+ +N C F
Sbjct: 412 KCSDVIGTSLKVSPWPCSELR--------TTGGYNLCSSTF 444
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 27/197 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCI DCYI +G+DL+++K GW+ +GI PS+N+ + VSG +PT +G+ GSE
Sbjct: 197 DSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSE 256
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG I NI+I +++E V + H
Sbjct: 257 MSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGH 316
Query: 118 PDEGRDPKALPKIRGISFVNVVS---------VNTIKAPVR----AGIIVLAPSVKWQSQ 164
PD+G DP+ALP IRGIS +VV +AP R A + + + W
Sbjct: 317 PDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGAGAWNCS 376
Query: 165 FVSGFNSQVFPLPCPQL 181
GF+ +V P PC +L
Sbjct: 377 NTYGFSERVVPSPCLEL 393
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 107/201 (53%), Gaps = 28/201 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDCYI +G+DL+A+K GW+ YGI+ ARPS+NI +RR+ G T + +G+ IGSE
Sbjct: 235 DSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGIAIGSE 294
Query: 72 MSGGI----------FNART----KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN++T K GRGG + NI I + + VKI IR H
Sbjct: 295 MSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVKIAIRFTGQYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PDE DP ALP I I+ +V+ N A + GI + + W
Sbjct: 355 PDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNITLNVTSESPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
++ G++ V P C L +
Sbjct: 415 SYIHGYSDLVSPEACEPLGER 435
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 110/203 (54%), Gaps = 34/203 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA R SSNIT+RRVSG++P ++G+ +GSE
Sbjct: 237 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSP-FAGIAVGSE 295
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I+NI + + +E + I+I H
Sbjct: 296 TSGGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP------------S 158
D+ D ALP ++GI+ NV V ++A + G+ I L+ +
Sbjct: 356 ADDKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRT 415
Query: 159 VKWQSQFVSGFNSQVFPLPCPQL 181
WQ VSG QV P PC +L
Sbjct: 416 PSWQCSDVSGVALQVSPWPCSEL 438
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+N+CIEDCYI +G+D +A+K GW+ YGIA RPSS+IT+RR++G++P ++G +GSE
Sbjct: 237 DSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSP-FAGFAVGSE 295
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I N+T+ + ++ V+ +RI +H
Sbjct: 296 TSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL--------APSVKWQ 162
PDE + ALP + ++ NV N +A + GI I L AP W+
Sbjct: 356 PDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWK 415
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ VSG V P PC +L + + S+ T
Sbjct: 416 CEAVSGGALDVQPSPCTELTSTSGTSFCT 444
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 108/199 (54%), Gaps = 30/199 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIED YI +G+DLVA+K GW+ YGIA RPSS IT+RRV G++P +SG+ IGSE
Sbjct: 235 DSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSE 293
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG IFN+ K + GRGG I NIT+ ++M V+ +RI H
Sbjct: 294 ASGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PDE ALP + G+S NV VN + GI I LA + W+
Sbjct: 354 PDEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWK 413
Query: 163 SQFVSGFNSQVFPLPCPQL 181
+ V G V P PC +L
Sbjct: 414 CRDVHGAALGVQPGPCAEL 432
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 28/210 (13%)
Query: 5 MKRKHYTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYS 64
++ + + D STNVCI CY+ +G D++ +K GW+ YGI+ A+PSSNI++ ++G T S
Sbjct: 4 IQLQTHPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGS 63
Query: 65 GVGIGSEMSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRI 110
G+ GSEMSGGI R K GRGG +EN+ I + M+ V + IRI
Sbjct: 64 GIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRI 123
Query: 111 GRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA 156
HPD+ D ALP I I+ +VV VN A + GI + +
Sbjct: 124 TGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ 183
Query: 157 PSVKWQSQFVSGFNSQVFPLPCPQLQNKTR 186
+ W + G+++ V P C QL++ R
Sbjct: 184 SAHPWNCSLIEGYSNSVIPESCEQLRSNCR 213
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 105/199 (52%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI +G+D+V +K GW+ YGI+ A PSSNI++R ++G T +G+ GSE
Sbjct: 252 DSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSE 311
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++N+ + + + V I IRI H
Sbjct: 312 MSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEH 371
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ + ALP I I+ +VV VN A + GI + + + W
Sbjct: 372 PDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSLSVRSTDPWNC 431
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
V G+++ V P C QL+
Sbjct: 432 SLVEGYSNSVSPEVCEQLR 450
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI CY+ +G D++ +K GW+ YGI+ A+PSSNI++ ++G T SG+ GSE
Sbjct: 235 DSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG +EN+ I + M+ V + IRI H
Sbjct: 295 MSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ D ALP I I+ +VV VN A + GI + + + W
Sbjct: 355 PDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQNKTR 186
+ G+++ V P C QL++ R
Sbjct: 415 SLIEGYSNSVIPESCEQLRSNCR 437
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI CY+ +G D++ +K GW+ YGI+ A+PSSNI++ ++G T SG+ GSE
Sbjct: 235 DSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG +EN+ I + M+ V + IRI H
Sbjct: 295 MSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ D ALP I I+ +VV VN A + GI + + + W
Sbjct: 355 PDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQNKTR 186
+ G+++ V P C QL++ R
Sbjct: 415 SLIEGYSNSVIPESCEQLRSNCR 437
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 15/153 (9%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S+NVCIED YI +G+DLVA K GW+ YGI RPSS+IT+RRV+G++P ++G+ IGSE S
Sbjct: 258 SSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSP-FAGIAIGSETS 316
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
GG+ N K + GR G I+NIT+ ++ ME + IRI HPD
Sbjct: 317 GGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHPD 376
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
+ DP ALP ++G++ NV V ++A + G+
Sbjct: 377 DKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGL 409
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 32/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPSS+IT+RR++G++P ++G+ +GSE
Sbjct: 234 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRITGSSP-FAGIAVGSE 292
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ K + GRGG I NIT + M+ + I+I H
Sbjct: 293 TSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP----------SVK 160
PD+ +P ALP ++GI F V N ++ G+ I L+ S
Sbjct: 353 PDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTP 412
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W+ VSG +V P PC +L
Sbjct: 413 WKCSDVSGAALEVSPFPCSEL 433
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 111/203 (54%), Gaps = 32/203 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPSS IT+RR++G++P ++G+ +GSE
Sbjct: 235 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSP-FAGIAVGSE 293
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I NIT+ + ME+ + I+I H
Sbjct: 294 TSGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK----- 160
PD+ +P ALP ++G+ +V ++ ++ G+ I L +K
Sbjct: 354 PDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGTAP 413
Query: 161 WQSQFVSGFNSQVFPLPCPQLQN 183
W+ VSG V P PC +L +
Sbjct: 414 WKCSDVSGAAVGVSPWPCSELTS 436
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 107/201 (53%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDCYI +G+DL+++K GW+ YGI+ RPS+NI +RR+ G T T +G+ IGSE
Sbjct: 243 DSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT-TSAGIAIGSE 301
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG IF++ R K GRGG + N+ I + + V I IR H
Sbjct: 302 MSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEH 361
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK--WQS 163
PD+ DP ALP I I+ +V+ V A + GI I L S K W
Sbjct: 362 PDDTYDPDALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLNVSSKLPWNC 421
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
++ GF+ V P C L+ +
Sbjct: 422 SYIKGFSDLVSPEACEPLKER 442
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 107/199 (53%), Gaps = 30/199 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIED YI +G+DLVA+K GW+ YGIA RPSS IT+RRV G++P +SG+ IGSE
Sbjct: 235 DSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSE 293
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG IFN+ K + GRGG I NIT+ ++M V+ +RI H
Sbjct: 294 ASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PDE ALP + +S NV VN + GI I LA + W+
Sbjct: 354 PDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWRNNAAWK 413
Query: 163 SQFVSGFNSQVFPLPCPQL 181
+ V G V P PC +L
Sbjct: 414 CRDVHGAALGVQPGPCAEL 432
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 111/201 (55%), Gaps = 32/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPSS+IT+RR++G++P +SG+ +GSE
Sbjct: 200 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP-FSGIAVGSE 258
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I+NIT+ + ME V+ I+I H
Sbjct: 259 TSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIAGDVGDH 318
Query: 118 PDEGRDPKALPKIRGISFVNVV--------SVNTIKAPVRAGII--------VLAP-SVK 160
PD+ +P ALP + GI+ ++ S+ +K GI V P S
Sbjct: 319 PDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNINLHGVPGPRSSP 378
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W+ VSG V P PC +L
Sbjct: 379 WKCSDVSGSALLVSPWPCSEL 399
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 104/201 (51%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDCYI +G+DL+A+K GW+ YGIA RPS+NI + R+ G T T SG+ IGSE
Sbjct: 235 DSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQT-SGIAIGSE 293
Query: 72 MSGGI-------------FNA-RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ +N R K GRGG + NI + + + V I I H
Sbjct: 294 MSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVL--APSVKWQS 163
PD+ DP ALP I ++ +VV N A + GI I+L + W
Sbjct: 354 PDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTSNYPWNC 413
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
+V G++ V P C L+ +
Sbjct: 414 SYVKGYSDLVQPEACEPLKER 434
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDC+I +G+DL+A+K GW+ YGI RP NIT+RR+ G T + +G+ IGSE
Sbjct: 245 DSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRRLVGQTRSSAGIAIGSE 304
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ +N+ R K GRGG + NI + + + V I IR H
Sbjct: 305 MSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFTGNYGEH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PDE DPKALP I I+ +V+ N A + GI + + W
Sbjct: 365 PDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNICLSNISLNVTSKFPWNC 424
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
++ G++ V P C L+
Sbjct: 425 SYIQGYSESVSPEICEPLR 443
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 89/141 (63%), Gaps = 14/141 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI + +DLV++K GW+ YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN+ R K GRGG + N+ I +K++ VK IR H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNV 138
PD+ DPKALP I I+F NV
Sbjct: 355 PDKNFDPKALPAIEKITFENV 375
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 112/210 (53%), Gaps = 32/210 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DL+++K GW+ YGIA RPSS IT+RR++G+ P ++G +GSE
Sbjct: 266 DSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSE 324
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I NIT+ + + + +RI H
Sbjct: 325 TSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGH 384
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAPSVK---------W 161
PD DP LP + G++ NV N +A + GI I L+ +VK W
Sbjct: 385 PDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLS-NVKLYGGDSVGPW 443
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ + VSG V P PC +L + + S+ T
Sbjct: 444 KCRAVSGGALDVQPSPCAELTSTSEMSFCT 473
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 112/210 (53%), Gaps = 32/210 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DL+++K GW+ YGIA RPSS IT+RR++G+ P ++G +GSE
Sbjct: 240 DSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSE 298
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I NIT+ + + + +RI H
Sbjct: 299 TSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGH 358
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAPSVK---------W 161
PD DP LP + G++ NV N +A + GI I L+ +VK W
Sbjct: 359 PDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLS-NVKLYGGDSVGPW 417
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ + VSG V P PC +L + + S+ T
Sbjct: 418 KCRAVSGGALDVQPSPCAELTSTSEMSFCT 447
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 112/210 (53%), Gaps = 32/210 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DL+++K GW+ YGIA RPSS IT+RR++G+ P ++G +GSE
Sbjct: 240 DSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSE 298
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I NIT+ + + + +RI H
Sbjct: 299 TSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGH 358
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAPSVK---------W 161
PD DP LP + G++ NV N +A + GI I L+ +VK W
Sbjct: 359 PDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLS-NVKLYGGDSVGPW 417
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ + VSG V P PC +L + + S+ T
Sbjct: 418 KCRAVSGGALDVQPSPCAELTSTSEMSFCT 447
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDCYI +G+DL+A+K GW+ YGIA RPS+NI + R+ G T T SG+ IGSE
Sbjct: 235 DSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGRTQT-SGIAIGSE 293
Query: 72 MSGGI-------------FNA-RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ +NA R K GRGG + NI + + + V I I H
Sbjct: 294 MSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIAITFTGLYGEH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVL--APSVKWQS 163
PD+ +P ALP I I+ +VV N A + GI I+L + W
Sbjct: 354 PDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTSNYPWNC 413
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
+V G++ V P C L+ +
Sbjct: 414 SYVKGYSDLVQPEACEPLKER 434
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 28/203 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI CY+ +G+D++ +K GW+ YGI+ A+PSSNI++ ++G T +G+ GSE
Sbjct: 219 DSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGAGIAFGSE 278
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG ++N+ I + M+ V + IRI H
Sbjct: 279 MSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVSMAIRITGNYGEH 338
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ D ALP I I+ +VV VN A + GI + + + W
Sbjct: 339 PDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNC 398
Query: 164 QFVSGFNSQVFPLPCPQLQNKTR 186
+ G+++ V P C QL++ R
Sbjct: 399 SLIEGYSNSVIPESCEQLKSNCR 421
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 105/204 (51%), Gaps = 30/204 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDC + G D +++K GW+ YGIA RP+ N+ +RRV + S + GS+
Sbjct: 229 DSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHAFSGSALAFGSD 288
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI FN+ + I+ KGRGG ++ I + I+ME V I SH
Sbjct: 289 MSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSH 348
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPS----VKW 161
PD+ DP ALP + I+ +V+ N A AGI I L+ + + W
Sbjct: 349 PDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNICLSNITLSTNSVSPITW 408
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKT 185
VSGF+ V P PCP+L N +
Sbjct: 409 ACSNVSGFSDSVLPEPCPELGNTS 432
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDCYI +G+DL+++K GW+ YGI+ RPS+NI++ R++G T T +G+ IGSE
Sbjct: 365 DSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRT-TSAGIAIGSE 423
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG IF++ R K GRGG + N+ I + + V I IR H
Sbjct: 424 MSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEH 483
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ D ALP I I+ VNV+ N +A + GI + ++ + W
Sbjct: 484 PDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNITLNVSKNNPWNC 543
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
V G++ V P C QL +
Sbjct: 544 SDVKGYSELVSPESCEQLNER 564
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 113/209 (54%), Gaps = 30/209 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+N+CIEDCYI +G+D +A+K GW+ YGIA R SS IT+RR++G++P ++G +GSE
Sbjct: 236 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRRITGSSP-FAGFAVGSE 294
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ F K + GRGG I NIT+ + ++ V+ +RI +H
Sbjct: 295 TSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL--------APSVKWQ 162
PD+ + ALP + ++ NV N +A + GI I L AP W+
Sbjct: 355 PDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWK 414
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTRFSWVT 191
+ VSG V P PC +L + + S+ T
Sbjct: 415 CEAVSGGALDVQPSPCTELTSTSGTSFCT 443
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 105/204 (51%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ +++RR++ +P +GV +GSE
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSE 297
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I R I M+ +K + NSH
Sbjct: 298 MSGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSH 357
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAP---SVK 160
PDEG DPKALP++ I++ ++ + N + GI I LA V+
Sbjct: 358 PDEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQ 417
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V+G S+V P PC L K
Sbjct: 418 WNCTDVAGVTSRVTPEPCSLLPEK 441
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 106/204 (51%), Gaps = 30/204 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDC + G D +++K GW+ YGIA RP+ N+ +RRV + S + GS+
Sbjct: 356 DSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSD 415
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI FN+++ I+ KGRGG ++ I + I+ME V I SH
Sbjct: 416 MSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSH 475
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPS----VKW 161
PD+ DP ALP + I+ +V N A AGI I L+ + + W
Sbjct: 476 PDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNICLSNITLSTNSVSPITW 535
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKT 185
+ VSGF+ V P PCP+L N +
Sbjct: 536 ECSNVSGFSDSVLPEPCPELGNPS 559
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 106/199 (53%), Gaps = 29/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDCYI +G+D++A+K GW+ YG + ARPS NIT+R + G T T +G+ IGSE
Sbjct: 228 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQT-TSAGIAIGSE 286
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ +N+ R K GRGG + NI I + + VK IR H
Sbjct: 287 MSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTGQYGDH 346
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK--WQS 163
PDE DPKALP I I+ +V N A + G+ I L+ + K W
Sbjct: 347 PDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNINLSVTSKSPWNC 406
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
++ G++ V P C L+
Sbjct: 407 SYIQGYSEAVSPEICEPLR 425
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDCYI +G+DL+++K GW+ YGI+ RPS+NI +RR+ G T T +G+ IGSE
Sbjct: 243 DSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT-TSAGIAIGSE 301
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG IF++ R K GRGG + N+ I + + V I IR H
Sbjct: 302 MSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEH 361
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK--WQS 163
PD+ DP ALP I I+ +V+ +A + GI I L S K W
Sbjct: 362 PDDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLNVSKKLPWNC 421
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
+V G++ V P C L+ +
Sbjct: 422 SYVKGYSDLVSPEACEPLRER 442
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STN+CI+ CY+ +G+D++ +K GW+ YGI+ A PSSNI++ ++G T +G+ IGSE
Sbjct: 235 DSSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG + N+ I + M V + IRI H
Sbjct: 295 MSGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD D ALP I I+ NVV +N A + GI + + W
Sbjct: 355 PDNNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSLSVQSMHPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ G+++ V P C QL+
Sbjct: 415 SLIQGYSNSVIPESCDQLR 433
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 37/221 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCI++C I +G+D + +K GW+ YG+A +P+SN+ +R V + + +G+ GSE
Sbjct: 232 DSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSE 291
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI F K +GRGG ++NI I K+E + + I + S SH
Sbjct: 292 MSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII----------------VLAPSVKW 161
PD+ DP A+P + ++F NV+ N A +GI+ S W
Sbjct: 352 PDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSW 411
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNF 202
V G + +VFP PCP LQN T F+SC +
Sbjct: 412 FCSNVMGISKEVFPEPCPDLQN-------TYSNFSSCFSSL 445
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ +++RR++ +P +GV +GSE
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSE 297
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I R I M+ +K + SH
Sbjct: 298 MSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSH 357
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PDEG DPKALP+I I++ ++ + N + GI I LA K
Sbjct: 358 PDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQ 417
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V+G S+V P PC L K
Sbjct: 418 WNCTDVAGVTSRVTPEPCSLLPEK 441
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 32/211 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DL+++K GW+ YGIA RPSS IT+RR++G+ P ++G +GSE
Sbjct: 231 DSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP-FAGFAVGSE 289
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ N K + GRGG I NIT+ + + + +RI H
Sbjct: 290 TSGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGH 349
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAPSVK---------W 161
PD +P LP + ++ NV+ N +A + GI I L+ +VK W
Sbjct: 350 PDASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLS-NVKLYGSASIGPW 408
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTS 192
+ + VSG V P PC +L + + + TS
Sbjct: 409 KCRAVSGAALDVQPSPCTELASTSETGFCTS 439
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 103/199 (51%), Gaps = 30/199 (15%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
+D S + CIEDC I G+D +A+K GW+ YGIA RP++N+ +RRV+ + + S + GS
Sbjct: 50 SDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGS 109
Query: 71 EMSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
EMSGGI +N+ + I+ KGRGG I+ I I + ME + S
Sbjct: 110 EMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGS 169
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVK 160
HPD+ DP ALP + I+ NV+ N A GI I L+ S+
Sbjct: 170 HPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASIS 229
Query: 161 WQSQFVSGFNSQVFPLPCP 179
W VSGF+ VFP PCP
Sbjct: 230 WVCSNVSGFSQWVFPEPCP 248
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 37/221 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDC I +G D +A+K GW+ YGIA RP+ N+ +RRV S + GS+
Sbjct: 232 DSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSD 291
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI +N++ I+ +GRGG +++I + I+M+ + I SH
Sbjct: 292 MSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI----------------IVLAPSVKW 161
PD+ DP ALP + F +++ N A AG+ + A S W
Sbjct: 352 PDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLSVNYASSTSW 411
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNF 202
+ VSGF+ V P+PCP L + + +S +SCL
Sbjct: 412 ECSNVSGFSDSVLPIPCPDLDSPSNYS-------SSCLSKL 445
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 99/195 (50%), Gaps = 28/195 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI CY+ +G D++ +K GW+ YGI+ A+PSSNI++ ++G T SG+ GSE
Sbjct: 235 DSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG +EN+ I + M+ V + IRI H
Sbjct: 295 MSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ D ALP I I+ +VV VN A + GI + + + W
Sbjct: 355 PDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNC 414
Query: 164 QFVSGFNSQVFPLPC 178
+ G+++ V P C
Sbjct: 415 SLIEGYSNSVIPESC 429
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S + CIEDC I G+D +A+K GW+ YGIA RP++N+ +RRV+ + + S + GSE
Sbjct: 233 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 292
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI +N+ + I+ KGRGG I+ I I + ME + SH
Sbjct: 293 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ DP ALP + I+ NV+ N A GI I L+ S+ W
Sbjct: 353 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISW 412
Query: 162 QSQFVSGFNSQVFPLPCP 179
VSGF+ VFP PCP
Sbjct: 413 VCSNVSGFSQWVFPEPCP 430
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 106/204 (51%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IEDCYI SG+D VAVK GW+ YGI+ P+ + +RR++ +PT + + +GSE
Sbjct: 258 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSE 317
Query: 72 MSGGIFNARTK----IDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R + ID GRGG +++I +R + M +K + SH
Sbjct: 318 MSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSH 377
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ DP ALP I+GI++ ++V N A GI I LAP K
Sbjct: 378 ADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLAPKAKKQP 437
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G SQV P PC L ++
Sbjct: 438 WTCTDIEGITSQVTPPPCDLLPDQ 461
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 106/204 (51%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IEDCYI SG+D VAVK GW+ YGI+ P+ + +RR++ +PT + + +GSE
Sbjct: 258 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSE 317
Query: 72 MSGGIFNARTK----IDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R + ID GRGG +++I +R + M +K + SH
Sbjct: 318 MSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSH 377
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ DP ALP I+GI++ ++V N A GI I LAP K
Sbjct: 378 ADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLAPKAKKQP 437
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G SQV P PC L ++
Sbjct: 438 WTCTDIEGITSQVTPPPCDLLPDQ 461
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 102/198 (51%), Gaps = 30/198 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S + CIEDC I G+D +A+K GW+ YGIA RP++N+ +RRV+ + + S + GSE
Sbjct: 231 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 290
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI +N+ + I+ KGRGG I+ I I + ME + SH
Sbjct: 291 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 350
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ DP ALP + I+ NV+ N A GI I L+ S+ W
Sbjct: 351 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISW 410
Query: 162 QSQFVSGFNSQVFPLPCP 179
VSGF+ VFP PCP
Sbjct: 411 VCSNVSGFSQWVFPEPCP 428
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 106/201 (52%), Gaps = 29/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VC+EDCY+ +G+D++A+K GW+ YG++ RPS NIT+RR+ G T T +G+ IGSE
Sbjct: 235 DSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQT-TSAGIAIGSE 293
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ +N+ R K GRGG + NI I + + VK I H
Sbjct: 294 MSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK--WQS 163
PDE DP ALP I I+ +V N A + GI I L+ + K W
Sbjct: 354 PDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINLSVTSKSPWNC 413
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
++ G++ V P C L+ +
Sbjct: 414 SYIQGYSDTVSPEICEPLRER 434
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D + V IEDCY+ SG+D+VA+K GW+ YGI+ PS +I +RR+ G +PT + + +GSE
Sbjct: 238 DSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRRLVGISPTSAIIALGSE 297
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I + + M +K + SH
Sbjct: 298 MSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTMVNMKWAFTMTGSYGSH 357
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD DP ALP + IS+ N+V+ N A GI I +A K
Sbjct: 358 PDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDICLTNVTITMAAKSKKYP 417
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W ++ G ++ V+P PC L+ +
Sbjct: 418 WNCTYIHGLSNAVYPQPCSLLEER 441
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDC I +G D +++K GW+ YGIA RP+ N+ +RRV + S + GS+
Sbjct: 231 DSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQASSGSTIAFGSD 290
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI +N+++ I+ +GRGG ++ I I I+ME + I SH
Sbjct: 291 MSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAIAATGYCGSH 350
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLA----PSVKW 161
PD+ DP ALP + I +++ N A AG+ I L+ S+ W
Sbjct: 351 PDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNITLSTNSVSSIPW 410
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
+ VSGF+ V P PCP L+
Sbjct: 411 ECSNVSGFSDYVLPKPCPDLE 431
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 86/152 (56%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA RPS NI +R + + +G+ IGSE
Sbjct: 338 DSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSE 397
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG + IT R I E V++ I + N H
Sbjct: 398 MSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMKTDYNEH 457
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD+G DP ALP IR ISF NV + ++ PVR
Sbjct: 458 PDDGYDPTALPVIRDISFTNVYG-HGVRVPVR 488
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 259 DSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCISPDSAVIALGSE 318
Query: 72 MSGGIFNARTK----IDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R + ID GRGG ++++ +R + M+ +K + SH
Sbjct: 319 MSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKYVFWMTGSYGSH 378
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PDE DPKALP I+ I++ ++V+ N AGI I L+ V
Sbjct: 379 PDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVL 438
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W VSG+ S V P PC L K
Sbjct: 439 WNCTDVSGYTSGVTPAPCQLLPEK 462
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +CIED I G D + +K GW+ YGIA +P+ N+ +RRV + + SG+ GSE
Sbjct: 319 DSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSE 378
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + K KGRGG I+ I I ++ME V + I SH
Sbjct: 379 MSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSH 438
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI----------------IVLAPSVKW 161
PD+ DP ALP + GI+F ++V N A +GI I S W
Sbjct: 439 PDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPW 498
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKT--RFSWVTSYPFNSCL 199
V G + V P PCP LQ KT FS +S+P+ + L
Sbjct: 499 LCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSFPYTNTL 538
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +CIED I G D + +K GW+ YGIA +P+ N+ +RRV + + SG+ GSE
Sbjct: 254 DSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSE 313
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + K KGRGG I+ I I ++ME V + I SH
Sbjct: 314 MSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSH 373
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI----------------IVLAPSVKW 161
PD+ DP ALP + GI+F ++V N A +GI I S W
Sbjct: 374 PDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPW 433
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKT--RFSWVTSYPFNSCL 199
V G + V P PCP LQ KT FS +S+P+ + L
Sbjct: 434 LCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSFPYTNTL 473
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 31/205 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NV IED ++ SG+D +AVK GW+ YGI RP+ ++ +RR + +P + + +GSE
Sbjct: 224 DSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSE 283
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I +R + ++ +K + SH
Sbjct: 284 MSGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSH 343
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI----------------IVLAP-SVK 160
PD G DPKALP+I+GIS+ ++V+ N + GI + P ++
Sbjct: 344 PDTGYDPKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNISLTQKPKELQ 403
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKT 185
W + G +S+V P PC L K+
Sbjct: 404 WNCTDIQGVSSKVTPQPCAALLEKS 428
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDC I +G D +++K GW+ YGIA RP+ N+ +RRV + S + GS+
Sbjct: 242 DSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQAYSGSTIAFGSD 301
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI +N+++ I+ +GRGG ++ I I I+ME + + SH
Sbjct: 302 MSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAMAATGYCGSH 361
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ DP ALP + I +++ N A AG+ I L+ S+ W
Sbjct: 362 PDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNVTLSINSVSSIPW 421
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
+ VSGF+ V P PCP L+
Sbjct: 422 ECSNVSGFSDSVLPKPCPDLE 442
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 31/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+ IEDC I SG+D +AVK GW+ YGI P+ ++ +RR++ +P + + +GSE
Sbjct: 240 DSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSE 299
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI++ R K GRGG ++NI ++ + + +K I H
Sbjct: 300 MSGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDH 359
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PD G DPKALP I GI++ +VV+ N K+ GI I ++ ++
Sbjct: 360 PDPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQVSEQQKKLQ 419
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRF 187
W +SG S V P PC L K +
Sbjct: 420 WNCSNISGVTSNVTPYPCALLPEKGQL 446
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 100/202 (49%), Gaps = 31/202 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NVCIED I +D +++K GW++YGI RP+S+I + RV + + +GSE
Sbjct: 229 DSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICRVDLQASLGAALALGSE 288
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + GRGG I ++ I ++ME V + I +SH
Sbjct: 289 MSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQMEDVHVAIEFTGDWSSH 348
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL----------APSVK 160
PDE DP ALP I GI+ N+V N A V +GI I L A S
Sbjct: 349 PDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDICLSNVNFSIPDSAHSTS 408
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W +SG++ VFP PC LQ
Sbjct: 409 WSCSNISGYSELVFPEPCTDLQ 430
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 107/199 (53%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI+ CY+ +G+D++ +K GW+ YGI+ ARPS+NI++ ++G T +G+ GSE
Sbjct: 235 DSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG ++N+ I + M+ V + IRI H
Sbjct: 295 MSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP---SVK----WQS 163
PD+ D ALP I I+ NVV VN A + GI I L+ SV+ W
Sbjct: 355 PDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQSMHPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ G+++ V P C QL+
Sbjct: 415 SLIEGYSNSVIPESCEQLR 433
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 107/199 (53%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI+ CY+ +G+D++ +K GW+ YGI+ ARPS+NI++ ++G T +G+ GSE
Sbjct: 219 DSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSE 278
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG ++N+ I + M+ V + IRI H
Sbjct: 279 MSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEH 338
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP---SVK----WQS 163
PD+ D ALP I I+ NVV VN A + GI I L+ SV+ W
Sbjct: 339 PDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQSMHPWNC 398
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ G+++ V P C QL+
Sbjct: 399 SLIEGYSNSVIPESCEQLR 417
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN I+DCYI SG+D VAVK GW+ YGIA P+ + +RR++ +PT + + +GSE
Sbjct: 236 DSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSE 295
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R T ID GRGG +++I +R + ++ +K + SH
Sbjct: 296 MSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PD DP A+P I+ I++ +VV+ N A GI I LA ++
Sbjct: 356 PDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQ 415
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V+G S+V P PC L ++
Sbjct: 416 WNCSDVAGITSEVTPKPCDLLSDQ 439
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N IEDC+I SG+D +AVK GW+ YGI P+ ++ ++R++ +P +GV +GSE
Sbjct: 246 DSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSE 305
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K +GRGG +++I +R + + +K + SH
Sbjct: 306 MSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSH 365
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVK 160
PD+ DP ALP+I I++ +VV+ N + V+ G+ ++
Sbjct: 366 PDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQ 425
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V GF+S V P PC L
Sbjct: 426 WNCTDVEGFSSDVVPPPCAPL 446
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N IEDC+I SG+D +AVK GW+ YGI P+ ++ ++R++ +P +GV +GSE
Sbjct: 246 DSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSE 305
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K +GRGG +++I +R + + +K + SH
Sbjct: 306 MSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSH 365
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVK 160
PD+ DP ALP+I I++ +VV+ N + V+ G+ ++
Sbjct: 366 PDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQ 425
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V GF+S V P PC L
Sbjct: 426 WNCTDVEGFSSDVVPPPCAPL 446
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 34/206 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVC+EDCYI +G+DL+++K GW+ YG+A RPSS IT+RR++G+ P ++G +GSE
Sbjct: 249 DSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP-FAGFAVGSE 307
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ K + GRGG I N+T+ + ++ + +RI H
Sbjct: 308 TSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGH 367
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAPSVK---------- 160
P + LP I G++ NV N +A + GI I L+ +VK
Sbjct: 368 PGASYNASLLPVIDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLS-NVKLYGIGSDSIG 426
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQNKT 185
W+ + VSG V P PC +L + +
Sbjct: 427 PWRCRAVSGSALDVQPSPCAELASTS 452
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 31/202 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NV IEDC+I SG+D +AVK GW+ YGI P+ ++ +RR++ +P + + +GSE
Sbjct: 237 DSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSE 296
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R T ID GRGG +++I R + M+ +K + H
Sbjct: 297 MSGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVK 160
PD+G DPKALPKI I++ ++V+ N + V+ G+ ++
Sbjct: 357 PDDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQ 416
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W V G +SQV P C L
Sbjct: 417 WNCTNVEGVSSQVTPPSCDLLH 438
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 102/206 (49%), Gaps = 31/206 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ V IEDCYI SG+D VAVK GW+ YGI PS +I +RR++ +PT + + +GSE
Sbjct: 237 DSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSPTSAMIALGSE 296
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG + +I +R + + +K + H
Sbjct: 297 MSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWVFWMTGNYGQH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD DP A+P++ GI++ +V + N A GI LAP K
Sbjct: 357 PDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTARLAPDAKELQ 416
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTR 186
W V G S V P PCP+L + +
Sbjct: 417 WNCTNVKGVTSHVSPKPCPELAAEGK 442
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V IEDCYI SG+D VAVK GW+ YGI PS +I +RR++ +PT + + +GSE
Sbjct: 237 DSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRRLTCISPTSAMIALGSE 296
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + + +K + H
Sbjct: 297 MSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSLHTMKWVFWMTGNYGQH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPS---VK 160
PD +P A+P++ GI++ +V + N A GI LAP+ ++
Sbjct: 357 PDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGICISNVTASLAPNATELQ 416
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V G S V P PCP+L
Sbjct: 417 WNCTNVKGVTSNVSPKPCPEL 437
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 33/189 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S++VCIED YI +G+DLVAVK GW+ YGI ARPS++IT+RR++G++P ++G+ IGSE
Sbjct: 6 DSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSP-FAGIAIGSE 64
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG++N K + GRGG I NIT+ + M V+ I+I H
Sbjct: 65 TSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISADVGDH 124
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------------IVLAPSV 159
PD+ +P ALP ++ + NV +A + G+ I+ +V
Sbjct: 125 PDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPIISTRNV 184
Query: 160 KWQSQFVSG 168
W+ +VSG
Sbjct: 185 PWKCSYVSG 193
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA A+PS NI +R + + +G+ IGSE
Sbjct: 249 DSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSE 308
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + IT R I V++ I I N H
Sbjct: 309 MSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEH 368
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD+G DP ALP +R ISF N+ ++ PVR
Sbjct: 369 PDDGYDPTALPILRDISFTNIRG-EGVRVPVR 399
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 34/206 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVC+EDCYI +G+DL+++K GW+ YG+A RPSS IT+RR++G+ P ++G +GSE
Sbjct: 237 DSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP-FAGFAVGSE 295
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ K + GRGG I N+T+ + ++ + +RI H
Sbjct: 296 TSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAPSVK---------- 160
P + LP + G++ NV N +A + GI I L+ +VK
Sbjct: 356 PGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLS-NVKLYGIGSDSIG 414
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQNKT 185
W+ + VSG V P PC +L + +
Sbjct: 415 PWRCRAVSGSALDVQPSPCAELASTS 440
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV I++CYI G+D +A+K GW+ YGIA RPS+NI + V+ + +GV IGSE
Sbjct: 201 DSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSE 260
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + NIT R I +E +++ I I N H
Sbjct: 261 MSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEH 320
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P I IS+ ++ + ++ PVR G++ V
Sbjct: 321 PDEGFDPKAVPIIENISYSSIHG-HGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHV 379
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP+PC L
Sbjct: 380 -FQCSFVQGQVIGYVFPVPCKNLD 402
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 102/199 (51%), Gaps = 30/199 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVA+K GW+ YGIA RPS+ +T+RRV G++P +SG+ IGSE
Sbjct: 242 DSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP-FSGIAIGSE 300
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ + K + GRGG I N+T+ +++ V+ +RI H
Sbjct: 301 ASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDH 360
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PD A+P + + NV VN + GI I L+ W+
Sbjct: 361 PDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWRSDAAWK 420
Query: 163 SQFVSGFNSQVFPLPCPQL 181
+ V G V P PC +L
Sbjct: 421 CRDVRGAALGVQPSPCAEL 439
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN I+DCYI SG+D VAVK GW+ YGIA P+ + +RR++ +PT + + +GSE
Sbjct: 122 DSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSE 181
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R T ID GRGG +++I +R + ++ +K + SH
Sbjct: 182 MSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSH 241
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PD DP A+P I+ I++ +VV+ N A GI I LA ++
Sbjct: 242 PDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQ 301
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V+G S+V P PC L ++
Sbjct: 302 WNCSDVAGITSEVTPKPCDLLSDQ 325
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 31/215 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D + V IEDCY+ SG+D VA+K GW+ YGIA P+ ++ +RR++ +PT + V IGSE
Sbjct: 267 DSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSALVAIGSE 326
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K GRG +++I R + + +K + SH
Sbjct: 327 MSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMTGDYKSH 386
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP-----------------SVK 160
PD+G D A+P + G+SF +V + K R I AP V
Sbjct: 387 PDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVTMEMTKPRKVM 446
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPF 195
W V G ++ V P PC QLQ K + + PF
Sbjct: 447 WNCADVEGVSTGVTPAPCGQLQQKQDGAGGSDCPF 481
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 235 DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + M +K + SH
Sbjct: 295 MSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ DP ALP I+GI++ ++V+ N A GI I LAP K
Sbjct: 355 ADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKVP 414
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 415 WTCTEIEGMTSGVSPRPCDLLPDQ 438
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV I++CYI G+D +A+K GW+ YGIA RPS+NI + V+ + +GV IGSE
Sbjct: 301 DSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSE 360
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + NIT R I +E +++ I I N H
Sbjct: 361 MSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEH 420
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P I IS+ ++ + ++ PVR G++ V
Sbjct: 421 PDEGFDPKAVPIIENISYSSIHG-HGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHV 479
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP+PC L
Sbjct: 480 -FQCSFVQGQVIGYVFPVPCKNLD 502
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 102/199 (51%), Gaps = 30/199 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVA+K GW+ YGIA RPS+ +T+RRV G++P +SG+ IGSE
Sbjct: 138 DSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP-FSGIAIGSE 196
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ + K + GRGG I N+T+ +++ V+ +RI H
Sbjct: 197 ASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDH 256
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PD A+P + + NV VN + GI I L+ W+
Sbjct: 257 PDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWRSDAAWK 316
Query: 163 SQFVSGFNSQVFPLPCPQL 181
+ V G V P PC +L
Sbjct: 317 CRDVRGAALGVQPSPCAEL 335
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 108/204 (52%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI+ P+ + +RR++ +PT + + +GSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSE 304
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R T ID GRGG +++I +R + ++ +K + SH
Sbjct: 305 MSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPS---VK 160
PD DP A+P I+ I++ +VV+ N A GI I LA + ++
Sbjct: 365 PDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQ 424
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V+G S+V P PC L ++
Sbjct: 425 WNCTDVAGITSEVNPKPCALLPDQ 448
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 101/204 (49%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA RPS+NI +R + + +G+ IGSE
Sbjct: 269 DSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRSMVSAGISIGSE 328
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + +IT R + + V++ I I N H
Sbjct: 329 MSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEH 388
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P +R ISF V ++ PVR G+ +
Sbjct: 389 PDEGYDPKAVPVLRDISFTGVHG-QGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHI 447
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G +FP PC L
Sbjct: 448 -FQCAFVQGRVIGTIFPAPCENLD 470
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 259 DSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSE 318
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++++ +R + M +K + SH
Sbjct: 319 MSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSH 378
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PDE DPKALP I+ I++ ++V+ N AGI I L+ V
Sbjct: 379 PDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVL 438
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W VSG+ S V P PC L K
Sbjct: 439 WNCTDVSGYTSGVTPQPCQLLPEK 462
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 102/201 (50%), Gaps = 32/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVA+K GW+ YGIA RPSS IT+RRV G++P +SG+ IGSE
Sbjct: 237 DSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP-FSGIAIGSE 295
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIP-IRIGRGSNS 116
SGG+ + K + GRGG I N+T+ ++M V+I +RI
Sbjct: 296 ASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVRISGVRIAGDVGD 355
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVK 160
HPD A+P + + NV VN GI I L+
Sbjct: 356 HPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVKLFGWRKNDAA 415
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W+ + V G V P PC +L
Sbjct: 416 WRCRDVRGAALGVQPSPCAEL 436
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA +PS NI +R V + +G+ IGSE
Sbjct: 268 DSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSE 327
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG ++N+ R K GRGG +++IT R + ++ V++ I I N H
Sbjct: 328 MSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEH 387
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKALP ++ ISF ++ ++ PVR GI +
Sbjct: 388 PDEGYDPKALPVLKDISFTSIHG-QGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHI 446
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G +FP PC L
Sbjct: 447 -FQCAFVHGRVIGTIFPAPCDNLD 469
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA +PS NI +R V + +G+ IGSE
Sbjct: 268 DSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSE 327
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG ++N+ R K GRGG +++IT R + ++ V++ I I N H
Sbjct: 328 MSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEH 387
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKALP ++ ISF ++ ++ PVR GI +
Sbjct: 388 PDEGYDPKALPVLKDISFTSIHG-QGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHI 446
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G +FP PC L
Sbjct: 447 -FQCAFVHGRVIGTIFPAPCDNLD 469
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 243 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSE 302
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + M+ +K + SH
Sbjct: 303 MSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSH 362
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DPKA P I+GI++ ++V+ N A GI I LA K
Sbjct: 363 ADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVP 422
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNFP 203
W V G +S V P PC L ++ P + L NFP
Sbjct: 423 WTCTDVEGISSGVTPTPCSTLPDQG--------PEKTSLCNFP 457
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 255 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSE 314
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + M+ +K + SH
Sbjct: 315 MSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSH 374
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DPKA P I+GI++ ++V+ N A GI I LA K
Sbjct: 375 ADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVP 434
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNFP 203
W V G +S V P PC L ++ P + L NFP
Sbjct: 435 WTCTDVEGISSGVTPTPCSTLPDQG--------PEKTSLCNFP 469
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S++V IEDCYI SG+D +AVK GW+ YGI PS +I +RR++ +PT + + +GSE
Sbjct: 152 DSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALGSE 211
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG + ++ +R + + +K + H
Sbjct: 212 MSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYGQH 271
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD DPKALP++ GI++ +V + N A GI LAP K
Sbjct: 272 PDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPKAKKLQ 331
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V G V P PCP+L
Sbjct: 332 WNCTDVQGVAYGVSPEPCPEL 352
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV I++CYI G+D +A+K GW+ YGIA RPS+NI + V+ + +GV IGSE
Sbjct: 301 DSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSE 360
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + NIT R I +E +++ I I N H
Sbjct: 361 MSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEH 420
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P I IS+ ++ + ++ PVR G++ V
Sbjct: 421 PDEGFDPKAVPIIENISYSSIHG-HGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRRNHV 479
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP+PC L
Sbjct: 480 -FQCSFVQGQVIGYVFPVPCRNLD 502
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S++V IED YI SG+D +AVK GW+ YGI PS +I +RR++ +PT + + +GSE
Sbjct: 232 DSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAMIALGSE 291
Query: 72 MSGGIFNART----KIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R ID GRGG ++++ +R + + +K + H
Sbjct: 292 MSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMTGNYGQH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD DP ALP++ GI++ +V + N A GI LAP K
Sbjct: 352 PDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQ 411
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V G S V P+PCP+L
Sbjct: 412 WNCTDVKGVASDVSPVPCPEL 432
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV IED YI SG+D +A+K GW+ YGI + +PS NI +RR++ +P + V +GSE
Sbjct: 256 DSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSE 315
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R T I+ GRG +++I ++ + + +K + H
Sbjct: 316 MSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDH 375
Query: 118 PDEGRDPKALPKIRGISFVNVVSVN-TIKAPVRA-------GIIVLAPSVK--------- 160
PD G DP ALPKI GI++ +V + N TI V GI V +++
Sbjct: 376 PDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLP 435
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG S V P PC L+ K
Sbjct: 436 WNCTDISGVTSNVVPKPCELLKEK 459
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 104/207 (50%), Gaps = 34/207 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV IED YI SG+D +A+K GW+ YGI +PS I +RR++ +P + + +GSE
Sbjct: 242 DSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSE 301
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGS-NS 116
MSGGI N R K GRGG +++I ++ +K+ + + GS
Sbjct: 302 MSGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGD 361
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK-- 160
HPD G DPKALPKI GI F +V++ N A GI I L+ K
Sbjct: 362 HPDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKK 421
Query: 161 ---WQSQFVSGFNSQVFPLPCPQLQNK 184
W VSG S V P PC L K
Sbjct: 422 KLPWNCTDVSGVTSNVVPKPCDLLSEK 448
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 31/206 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI+ P+ + +RR++ +PT + + +GSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSE 304
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + M +K + SH
Sbjct: 305 MSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PD DP A+P I I++ ++V+ N A GI I LA ++
Sbjct: 365 PDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQ 424
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTR 186
W ++G +S V P PC L + +
Sbjct: 425 WNCTDIAGISSGVTPKPCSLLPEQEK 450
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 104/204 (50%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV I++CYI G+D VA+K GW+ YGIA RPS+NIT+R V+ + +GV IGSE
Sbjct: 307 DSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRSMVSAGVSIGSE 366
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + NI R I +E V++ I I N H
Sbjct: 367 MSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEH 426
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG +PKA+P + IS+ ++ ++ PVR GI+ V
Sbjct: 427 PDEGFNPKAVPIVGNISYTSIHG-QGVRVPVRIQGSAEIPVKNVTFHDMSVGILDKKHHV 485
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q +V G VFP+PC L
Sbjct: 486 -FQCSYVQGQVIGYVFPVPCKNLD 508
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 102/201 (50%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ V IEDCYI SG+D +AVK GW+ YGI PS +I +RR++ +PT + + +GSE
Sbjct: 236 DSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCISPTSAMIALGSE 295
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++++ +R + + +K + H
Sbjct: 296 MSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLSLHTMKWVFWMTGNYGQH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD +PKALP++ GI++ +V + N A GI LAP K
Sbjct: 356 PDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQ 415
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V G S V P PCP+L
Sbjct: 416 WNCTDVKGVASGVSPKPCPEL 436
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 85/152 (55%), Gaps = 16/152 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +AVK GW+ YGI RPS NI +R + +TP ++G+ IGSE
Sbjct: 267 DSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVKSTP-FAGISIGSE 325
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + IT R I E V++ I + N H
Sbjct: 326 MSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEH 385
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD+G DP ALP +R ISF V ++ PVR
Sbjct: 386 PDDGYDPLALPILRDISFTTVHG-QGVRVPVR 416
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D T++ IEDCYI SG+D +AVK GW+ YGI + P+ + +RRV+ +P + + +GSE
Sbjct: 248 DSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCISPDSATIALGSE 307
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R T ID GRGG +++I +R + M+ +K + H
Sbjct: 308 MSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQH 367
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PD G DPKALP I GI++ ++V+ N + GI I L ++
Sbjct: 368 PDPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVTITLTKKPKELQ 427
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V G S+V P C L K
Sbjct: 428 WNCTDVQGVTSRVTPPACSLLPEK 451
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N IEDCYI SG+D +AVK GW+ YGI + PS +I +RR++ +P + + +GSE
Sbjct: 183 DSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSE 242
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + NI + + + +K + SH
Sbjct: 243 MSGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSH 302
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR----------------AGIIVLAPSVKW 161
PD G DPKALP I GI++ +V++ N + P + A I + + W
Sbjct: 303 PDTGFDPKALPTITGINYRDVIAKN-VAYPAKLEGIANDPFTGICISNANIEKVGKKLAW 361
Query: 162 QSQFVSGFNSQVFPLPCPQLQNK 184
V G S V P PC LQ K
Sbjct: 362 NCTDVHGVTSNVSPEPCALLQEK 384
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIE+ I G D + +K GW+ YGI+ +P+SN+ +RRV + +GV +GSE
Sbjct: 260 DSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRRVRLQSAAGAGVALGSE 319
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI F K +GRGG I++I I + M+ +++ I+ S+ H
Sbjct: 320 MSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVMDNLQVGIKATGYSDMH 379
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI----------------IVLAPSVKW 161
PDE DP +LP + GI+F ++V N A G+ I PS W
Sbjct: 380 PDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFTSICLSNISISISSDPSTPW 439
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
+SG + V P PCP+LQ
Sbjct: 440 LCSNISGSSKNVSPEPCPELQ 460
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 100/204 (49%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA RPS+NI +R + + +G+ IGSE
Sbjct: 270 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSE 329
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + +IT R + + V++ I I N H
Sbjct: 330 MSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEH 389
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P + ISF + ++ PVR G+ +
Sbjct: 390 PDEGYDPKAVPILGDISFTGIHG-QGVRVPVRIHGSQEIPVRNVTFWDMSVGLTYKKKHI 448
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP PC L
Sbjct: 449 -FQCAFVQGRVIGTVFPAPCENLD 471
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI +P+ ++ +RR++ +P + + +GSE
Sbjct: 244 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSE 303
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + + +K + SH
Sbjct: 304 MSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSH 363
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PD DPKALP I GI++ +VV+ N + GI I ++ ++
Sbjct: 364 PDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQ 423
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRF 187
W V+G S V P C L K +F
Sbjct: 424 WNCTDVAGVTSNVTPNTCQLLPEKGKF 450
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 31/202 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++V IEDCYI SG+D VA+K GW+ YGIA PS +I +RR++ +PT + + +GSE
Sbjct: 252 DSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGSE 311
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + ++ +R + ++ +K + SH
Sbjct: 312 MSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKSH 371
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP-----------------SVK 160
PD+G DP A+P + IS+ +VV+ K R I AP
Sbjct: 372 PDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANVTATLSKSRKYP 431
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W + G ++ V P PC LQ
Sbjct: 432 WTCTDIEGVSTGVTPAPCQPLQ 453
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA RPS NI +R + + +G+ IGSE
Sbjct: 266 DSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSE 325
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K +GRG + IT R I E V++ I + N H
Sbjct: 326 MSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVMKTDYNEH 385
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD+G DP ALP +R ISF V ++ PVR
Sbjct: 386 PDDGYDPMALPILRDISFTTVHG-QGVRVPVR 416
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCI + I +G+D + +K GW+ YG+A +P+S + +R V + + +G+ GSE
Sbjct: 232 DSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSE 291
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI K KGRGG ++NI I K+E + + I + S SH
Sbjct: 292 MSGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII-----------------VLAPSVK 160
PD+ DP A+P + ++F NV+ N A +GI+ + S
Sbjct: 352 PDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPS 411
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNF 202
W + G + +VFP PCP LQN T F+SC +
Sbjct: 412 WFCSDIMGISEEVFPEPCPDLQN-------TYSNFSSCFSSL 446
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 31/202 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D + V IEDCY+ SG+D VA+K GW+ YGIA+ PS +I++RR++ +PT + + +GSE
Sbjct: 242 DSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSE 301
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + ++ R ++++ +K + SH
Sbjct: 302 MSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSH 361
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP-----------------SVK 160
PD+G D A+P + IS+ +VV+ K R I AP V
Sbjct: 362 PDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTMEMTKERKVS 421
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W V G ++ V P PC LQ
Sbjct: 422 WNCADVEGVSAGVTPAPCAPLQ 443
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 260 DSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSE 319
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++++ +R + M +K + SH
Sbjct: 320 MSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSH 379
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PD+ DPKALP I+ I++ ++V+ N AGI I L+ V
Sbjct: 380 PDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVL 439
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W VSG+ S V P PC L K
Sbjct: 440 WNCTDVSGYTSGVTPQPCQLLPEK 463
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI +P+ ++ +RR++ +P + + +GSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSE 304
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + + +K + SH
Sbjct: 305 MSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PD DPKALP I GI++ +VV+ N + GI I ++ ++
Sbjct: 365 PDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQ 424
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRF 187
W V+G S V P C L K +F
Sbjct: 425 WNCTDVAGVTSNVTPNTCQLLPEKGKF 451
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSE 304
Query: 72 MSGGIFNARTK----IDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R + ID GRGG +++I +R + M+ +K + SH
Sbjct: 305 MSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP ALP I+GI++ ++V+ N A GI I LA K
Sbjct: 365 ADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAP 424
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W ++G S V P PC L ++
Sbjct: 425 WTCTDIAGITSGVVPQPCDLLPDQ 448
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 32/206 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IEDCYI SG+D +AVK G + YGI + P + +RR++ +P + + +GSE
Sbjct: 208 DSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCISPKSAAIALGSE 267
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + ++ +K + +SH
Sbjct: 268 MSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKYVFWMIGSYSSH 327
Query: 118 PDEGRDPKALPKIRGISFVNVVSVN-TIKAPVRA--------GIIV------LAPSVK-- 160
DEG DPKALP+I I+F ++ + N TI + GI + LA K
Sbjct: 328 ADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFTGICISNVTMTLAEKHKEP 387
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQNKT 185
W VSG +S V P+PC L K+
Sbjct: 388 AWNCTDVSGVSSNVTPMPCAALPKKS 413
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 103/204 (50%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV I++CYI G+D +A+K GW+ YGIA RPS+NI ++ V + +GV IGSE
Sbjct: 293 DSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRSMVSAGVSIGSE 352
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K GRG + NI R I +E V++ I I N H
Sbjct: 353 MSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIVIKTDYNEH 412
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P I IS+ ++ + ++ PVR GI+ V
Sbjct: 413 PDEGFDPKAVPTIGNISYTSIHG-HRVRVPVRIQGSAEIPVKNVTFHDMSIGIVDKKHHV 471
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP+PC L
Sbjct: 472 -FQCSFVQGQVIGYVFPVPCKNLD 494
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 100/204 (49%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + M +K + SH
Sbjct: 307 MSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DPKALP+I GI++ +VV+ N A GI I +A K
Sbjct: 367 ADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAAKAKKQP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 427 WTCTDIEGITSGVTPKPCNSLPDQ 450
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D T+ IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 260 DSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSE 319
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + M+ +K + SH
Sbjct: 320 MSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSH 379
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ DP ALP I+ I++ ++V+ N A GI I LA K
Sbjct: 380 ADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVP 439
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W ++G +S V P PC L ++
Sbjct: 440 WTCTDIAGISSDVTPAPCDLLPDQ 463
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 103/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +PT + + +GSE
Sbjct: 6 DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSE 65
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + M +K + SH
Sbjct: 66 MSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTGNYGSH 125
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
D DP ALP I+ I++ ++V+ N A GI I LA ++
Sbjct: 126 ADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQ 185
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG +S V P PC L N+
Sbjct: 186 WNCTDISGISSSVVPQPCNALPNQ 209
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 31/205 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NVCIED I G+D +++K GW++YGI+ RP+S+I + RV + + + IGSE
Sbjct: 227 DSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSE 286
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + GRGG I + + + M+ V + I +SH
Sbjct: 287 MSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSH 346
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAG-----------------IIVLAPSVK 160
PD+ DP LP I I+ N+ N A V +G I LAPS
Sbjct: 347 PDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADLAPSSA 406
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKT 185
W V G++ VFP PC +L + +
Sbjct: 407 WTCSNVHGYSELVFPKPCSELHDTS 431
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA RPS+NI +R + + +G+ IGSE
Sbjct: 270 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSE 329
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K GRG + NIT R + + V++ I I N H
Sbjct: 330 MSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRVGIVIKTDYNEH 389
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PDEG DPKA+P ++ ISF + ++ PVR
Sbjct: 390 PDEGYDPKAVPTLQDISFSGIHG-QGVRVPVR 420
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IED YI SG+D +A+K GW+ YGI +PS I +RR++ +P + V +GSE
Sbjct: 248 DSCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSE 307
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I ++ + ++ +K + SH
Sbjct: 308 MSGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSH 367
Query: 118 PDEGRDPKALPKIRGISFVNVVSVN-TIKAPVRA-------GIIVLAPSVK--------- 160
PD G DP ALPKI I++ +V + N TI + GI V +++
Sbjct: 368 PDNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLP 427
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKTRF 187
W VSG S V P PC L K +F
Sbjct: 428 WNCTDVSGVTSNVSPTPCELLAEKEKF 454
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 235 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + M+ +K + SH
Sbjct: 295 MSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ DP ALP I+ I++ ++V+ N A GI I LA K
Sbjct: 355 ADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVP 414
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W ++G +S V P PC L ++
Sbjct: 415 WTCTDIAGISSDVTPAPCGLLPDQ 438
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIE C I +G D +A+K GW+ YGIA RPS NI +RRV + + S + GSE
Sbjct: 229 DSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSE 288
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N + + KGRGG I+ I + ++ME + SH
Sbjct: 289 MSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSH 348
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ DP ALP ++ I+ NV N A +GI I L+ S W
Sbjct: 349 PDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSW 408
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPF 195
VSGF+ V P PC L S + P
Sbjct: 409 ICSDVSGFSESVIPPPCSDLSTPYSISSSAASPL 442
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IEDCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 7 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSATIALGSE 66
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG I++I ++ + M +K ++ SH
Sbjct: 67 MSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMDGDYKSH 126
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK----- 160
PD DP ALP I+ I++ ++V+ N A GI + L + K
Sbjct: 127 PDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTAKHKKYP 186
Query: 161 WQSQFVSGFNSQVFPLPCPQL--QNKTRFSWVTSYPFNS 197
W V G S V P PC L Q + S +P NS
Sbjct: 187 WTCTDVQGMTSGVTPPPCDSLPDQGPEKIS-ACDFPANS 224
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 29/202 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+ IEDCYI SG+D VA+K GW+ YGI PS +I +RR+ +P + + +GSE
Sbjct: 245 DSCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSE 304
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + +I I+ + + +K + +SH
Sbjct: 305 MSGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PD G DPK LP I GI++ +V++ N + GI I ++ ++W
Sbjct: 365 PDNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTIHSGKKKLQWN 424
Query: 163 SQFVSGFNSQVFPLPCPQLQNK 184
+ G S V+P PC L K
Sbjct: 425 CTDIEGVTSNVYPKPCELLPLK 446
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIE C I +G D +A+K GW+ YGIA RPS NI +RRV + + S + GSE
Sbjct: 234 DSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSE 293
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N + + KGRGG I+ I + ++ME + SH
Sbjct: 294 MSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSH 353
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ DP ALP ++ I+ NV N A +GI I L+ S W
Sbjct: 354 PDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSW 413
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPF 195
VSGF+ V P PC L S + P
Sbjct: 414 ICSDVSGFSESVIPPPCSDLSTPYSISSSAASPL 447
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 101/204 (49%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE+CYI G+D VA+K GW+ YGIA RPS+NIT+R V + +GV IGSE
Sbjct: 305 DSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRSMVSAGVSIGSE 364
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + NI R I +E V++ I I N H
Sbjct: 365 MSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEH 424
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDE DPKA+P IS+ ++ ++ PVR GI+ V
Sbjct: 425 PDELFDPKAVPVGGNISYTSIHG-QRVRVPVRIQGSAEIPVRNVTFHDMSVGILDKKHHV 483
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP+PC L
Sbjct: 484 -FQCSFVQGQVIGYVFPVPCKNLD 506
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 99/204 (48%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YG+A RPS NI +R + + +GV IGSE
Sbjct: 268 DSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSE 327
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG +++I R + + V++ I I N H
Sbjct: 328 MSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEH 387
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PD+G DPKALP + ISF V ++ PVR GI +
Sbjct: 388 PDDGFDPKALPILEDISFTGVHG-QGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHI 446
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q +V G VFP PC L
Sbjct: 447 -FQCAYVEGRVIGTVFPAPCENLD 469
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 107/210 (50%), Gaps = 42/210 (20%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCI+DCYI +G+D++A+K GW+ YGIA +PSSNI +RRV+G T + + IGSE
Sbjct: 223 DSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSE 282
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
SGGI N RT + GRG I N+ + I + ++ I I S+
Sbjct: 283 TSGGIENVLVEDLVAVSTKSGISIRTGV--GRGAYIRNVVLSSITLLDIQTAITISGFSS 340
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSV---------------- 159
HPD G + A P + ++ V V+ NT+ P R I+ P V
Sbjct: 341 EHPDNGFNATAFPVVEKVT-VRGVTGNTLDRPGR---ILGIPEVPFRDICLEDIALDATT 396
Query: 160 ---KWQSQFVSGFNSQVFPLPCPQL-QNKT 185
W+ V G++S V P C QL +N T
Sbjct: 397 GLTAWKCTDVEGYSSSVTPKICSQLSENNT 426
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ M +K ++ NSH
Sbjct: 307 MSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVK 160
D DP ALP+I I++ +VV+ N A V G+ V A
Sbjct: 367 ADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLGMAVKAKKRS 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 427 WTCTDIEGMTSGVTPPPCDLLPDQ 450
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 107/216 (49%), Gaps = 34/216 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI+ P+ ++ +RR++ +PT + + +GSE
Sbjct: 235 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG + +I +R + M+ +K + SH
Sbjct: 295 MSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP A+P I I++ ++V+ N A GI I LA K
Sbjct: 355 ADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVP 414
Query: 161 WQSQFVSGFNSQVFPLPCPQL--QNKTRFSWVTSYP 194
W VSG +S V P PC L Q + +F S+P
Sbjct: 415 WTCTDVSGISSGVTPEPCELLPGQAEEKFG-ACSFP 449
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 105/202 (51%), Gaps = 35/202 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCI+DCYI +G+D++A+K GW+ YGIA +PSSNI +RRV+G T + + IGSE
Sbjct: 223 DSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSE 282
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
SGGI N RT + GRG I N+ + I + ++ I I S+
Sbjct: 283 TSGGIENVLVEDLVAVSTKSGVSIRTGV--GRGAYIRNVVLSSITLLDIQTAITISGFSS 340
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVR-AGI------------IVLAPS---V 159
HPD G + A P + ++ V V+ NT+ P R GI I L S
Sbjct: 341 EHPDNGYNATAFPVVEKVT-VRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDASTGLT 399
Query: 160 KWQSQFVSGFNSQVFPLPCPQL 181
W+ V G++S V P C +L
Sbjct: 400 AWKCTDVEGYSSSVTPKICKEL 421
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ M +K ++ NSH
Sbjct: 307 MSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVK 160
D DP ALP+I I++ +VV+ N A V G+ V A
Sbjct: 367 ADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRS 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 427 WTCTDIEGMTSGVTPPPCDLLPDQ 450
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 107/216 (49%), Gaps = 34/216 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI+ P+ ++ +RR++ +PT + + +GSE
Sbjct: 235 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG + +I +R + M+ +K + SH
Sbjct: 295 MSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP A+P I I++ ++V+ N A GI I LA K
Sbjct: 355 ADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVP 414
Query: 161 WQSQFVSGFNSQVFPLPCPQL--QNKTRFSWVTSYP 194
W VSG +S V P PC L Q + +F S+P
Sbjct: 415 WTCTDVSGISSGVTPEPCELLPGQAEEKFG-ACSFP 449
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV I++CYI G+D +A+K GW+ YGIA RPS+NIT++ V + +GV IGSE
Sbjct: 291 DSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRSMVSAGVSIGSE 350
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K GRG + N+ + I E V++ I I N H
Sbjct: 351 MSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRVGIVIKTDYNEH 410
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSV 159
PDEG DPKA+P I IS+ ++ + ++ PVR GI+ V
Sbjct: 411 PDEGFDPKAVPTIGNISYTSIHG-HRVRVPVRIQGSAQIPVKNVTFHDMSIGIVDKKHHV 469
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q FV G VFP+PC L
Sbjct: 470 -FQCSFVQGQVIGYVFPVPCKNLD 492
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPYSATIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + + +K ++ NSH
Sbjct: 307 MSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP ALP+I+ I++ +VV+ N A GI + +A K
Sbjct: 367 ADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 427 WTCTDIEGMTSGVTPPPCGLLPDQ 450
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCY+ SG+D +AVK GW+ +GI + P+ +++RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSE 308
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I R M+ +K + N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
P G DPKA+P+I I++ ++ + N + G I LA K
Sbjct: 369 PASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG +S+V P PC L K
Sbjct: 429 WNCTNISGVSSKVTPKPCSLLPEK 452
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V IE+CYI G+D +A+K GW+ YGIA RPSSNI++R V+ + +G+ IGSE
Sbjct: 275 DSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNARSLVSAGISIGSE 334
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG I NI+ R I + V+ I I N H
Sbjct: 335 MSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEH 394
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
D+G D A P I ISF + ++ PVRA
Sbjct: 395 ADDGYDRTAFPDITSISFKGIHG-RGVRVPVRA 426
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 100/205 (48%), Gaps = 31/205 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NVCIED I G+D +++K GW++YGI+ RP+S+I + RV + + + IGSE
Sbjct: 227 DSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSE 286
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + GRGG I + + + M+ V + I +SH
Sbjct: 287 MSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSH 346
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL----------APSVK 160
PD+ DP LP I I+ N+ N A V +GI I L APS
Sbjct: 347 PDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADSAPSSA 406
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKT 185
W V G++ VFP PC +L + +
Sbjct: 407 WTCSNVHGYSELVFPKPCSELHDTS 431
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 98/200 (49%), Gaps = 35/200 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
++ IEDCYI G+D +A+K GW+ YG+A RPS NI +R + + +GV IGSEMSGG
Sbjct: 288 DMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGG 347
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
+ N R K GRGG +++I R + + V++ I I N HPD+G
Sbjct: 348 VSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDG 407
Query: 122 RDPKALPKIRGISFVNVVSVNTIKAPVR------------------AGIIVLAPSVKWQS 163
DPKALP + ISF V ++ PVR GI + +Q
Sbjct: 408 FDPKALPILEDISFTGVHG-QGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHI-FQC 465
Query: 164 QFVSG-FNSQVFPLPCPQLQ 182
+V G VFP PC L
Sbjct: 466 AYVEGRVIGTVFPAPCENLD 485
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + + +K ++ NSH
Sbjct: 307 MSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP ALP+I+ I++ +VV+ N A GI + +A K
Sbjct: 367 ADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 427 WTCTDIEGMTSGVTPPPCGLLPDQ 450
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCIEDCYI G+D +++K GW+ YG PS I ++RV + T +G+ GSE
Sbjct: 277 DSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAFSHTSAGISFGSE 336
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG I N+T+ I M V+ I + H
Sbjct: 337 MSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVRTAIAVMGNYGEH 396
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK----W 161
PDE + A P I I N+V N +A + G+ +VL W
Sbjct: 397 PDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKVVLDTRTTKQGPW 456
Query: 162 QSQFVSGFNSQVFPLPCPQL 181
+V+GF + V P PCP+L
Sbjct: 457 NCSWVTGFYNFVLPKPCPEL 476
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 84/153 (54%), Gaps = 15/153 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +AVK GW+ YGIA RPSSNI +R V+ + +G+ IGSE
Sbjct: 271 DSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAGISIGSE 330
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG I NI+ R I + V+ I I N H
Sbjct: 331 MSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEH 390
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
D+G D A P I GISF + ++ PVRA
Sbjct: 391 ADDGYDRNAFPDITGISFKEIHGWG-VRVPVRA 422
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 84/154 (54%), Gaps = 15/154 (9%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
TD +V IE+CYI G+D +A+K GW+ YGIA RPSS+I +R V+ + +G+ IGS
Sbjct: 87 TDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGS 146
Query: 71 EMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
EMSGG+ N R K GRGG I NI+ R I + V+ I I N
Sbjct: 147 EMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNE 206
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
H D+G D A P I ISF + ++ PVRA
Sbjct: 207 HADDGYDRTAFPDITSISFKGIHG-QGVRVPVRA 239
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCY+ SG+D +AVK GW+ +GI + P+ +++RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 308
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I R M+ +K + N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
P G DPKA+P I I++ ++ + N + G I LA K
Sbjct: 369 PASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG +S+V P PC L K
Sbjct: 429 WNCTSISGVSSKVTPKPCSLLPEK 452
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCY+ SG+D +AVK GW+ +GI + P+ +++RR++ +P +G+ +GSE
Sbjct: 238 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 297
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I R M+ +K + N H
Sbjct: 298 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 357
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
P G DPKA+P I I++ ++ + N + G I LA K
Sbjct: 358 PASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 417
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG +S+V P PC L K
Sbjct: 418 WNCTSISGVSSKVTPKPCSLLPEK 441
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCY+ SG+D +AVK GW+ +GI + P+ +++RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 308
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I R M+ +K + N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
P G DPKA+P I I++ ++ + N + G I LA K
Sbjct: 369 PASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG +S+V P PC L K
Sbjct: 429 WNCTSISGVSSKVTPKPCSLLPEK 452
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + M +K + SH
Sbjct: 307 MSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP ALP+I GI++ +VV+ N A GI I +A K
Sbjct: 367 ADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 427 WACTDIEGITSGVTPKPCNSLPDQ 450
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGI RPS NI +R + + +G+ IGSE
Sbjct: 264 DSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSE 323
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + IT + + ++ V++ I I N H
Sbjct: 324 MSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRVGIVIKTDYNEH 383
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
P G DP+ALP +R ISF+N+ ++ PVR
Sbjct: 384 PGAGYDPRALPILRDISFMNIRG-QGVRVPVR 414
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 82/152 (53%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +AVK GW+ YGI RPS NI +R + + +G+ IGSE
Sbjct: 267 DSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRSMVSAGISIGSE 326
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRG + IT R I E V++ I + N H
Sbjct: 327 MSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEH 386
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD+G DP ALP +R ISF V ++ PVR
Sbjct: 387 PDDGYDPLALPILRDISFTTVHG-QGVRVPVR 417
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 31/205 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IED +I SG+D VAVK GW+ YGI+ P+ + +RR++ +P + + +GSE
Sbjct: 7 DSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAMIALGSE 66
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R +KM +K + SH
Sbjct: 67 MSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMDGNYGSH 126
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD DPKA P I GI++ ++V+ N GI I +AP K
Sbjct: 127 PDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAPESKKEP 186
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKT 185
W + G S V P PC L +T
Sbjct: 187 WTCSDIHGITSGVTPQPCGMLPAET 211
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGI RPS NI +R + + +G+ IGSE
Sbjct: 269 DSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSE 328
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + IT + + + V++ I I N H
Sbjct: 329 MSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEH 388
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
P G DP+ALP +R ISF+N+ ++ PVR
Sbjct: 389 PGTGYDPRALPILRDISFINIRG-QGVRVPVR 419
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 28/200 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIE+ I+ G D +++K GW+ YGIA R + ++ +RRV + + S + GSE
Sbjct: 231 DSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQSSSGSSIAFGSE 290
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N + KGRGG I+ I I +++E + + + H
Sbjct: 291 MSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINLALGAIGDHGLH 350
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD+ DPKA+P + I+ N+ N A GI ++++ S W
Sbjct: 351 PDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNITLMVSSSNSWTC 410
Query: 164 QFVSGFNSQVFPLPCPQLQN 183
V G++ VFP+PCP+L++
Sbjct: 411 SNVIGYSDSVFPVPCPELKS 430
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 97/207 (46%), Gaps = 33/207 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE CYI G+D VAVK GW+ YGI +P +NIT+R + P +GV IGSE
Sbjct: 244 DSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSE 303
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG + + R I ME V++ I I H
Sbjct: 304 MSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDH 363
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA---------GIIVLAPSVK-------- 160
PDE DP ALP + I F + + ++ P R G+ + +V
Sbjct: 364 PDEFYDPTALPVVEKIFFDGIYG-SEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHV 422
Query: 161 WQSQFVSG-FNSQVFPLPCPQLQNKTR 186
+Q F+ G +FP PC L TR
Sbjct: 423 FQCSFLQGEVFGTIFPKPCEDLGTSTR 449
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 33/204 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I ++ +++K GW+ YGI+ RP+S+I + RV + + + + GSE
Sbjct: 236 DSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSE 295
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG IE++ I ++ME V + I ++H
Sbjct: 296 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 355
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-----------PSV 159
PD+ DP LP I ++ N+ N A V +GI I L+ PS
Sbjct: 356 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPS- 414
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQN 183
W VSG++ VFP PC +L++
Sbjct: 415 SWSCSDVSGYSEAVFPEPCTELRD 438
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI G+D +A+K GW+ YGIA +PS NI +R + + +G+ IGSE
Sbjct: 257 DSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRSNVSAGISIGSE 316
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + IT R + V++ I I N H
Sbjct: 317 MSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRVGIVIKTNYNEH 376
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD G DP A P + ISF+NV ++ PVR
Sbjct: 377 PDAGYDPLAFPVLSDISFINVRG-QGVRVPVR 407
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 31/202 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++V IEDCYI SG+D VA+K GW+ YGI+ PS +I +RR++ +PT + + +GSE
Sbjct: 255 DSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSE 314
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG ++++ +R + + +K + SH
Sbjct: 315 MSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSH 374
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP-----------------SVK 160
PD+ DP A+P + IS+ +VV+ K R I AP
Sbjct: 375 PDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLSKSRKYP 434
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W V G + V P PC LQ
Sbjct: 435 WTCADVEGVSVNVSPAPCQPLQ 456
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 98/207 (47%), Gaps = 33/207 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE+CYI G+D VAVK GW+ YGI +P +NIT+R + P +GV IGSE
Sbjct: 244 DSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSE 303
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG + + R I ME V++ I I H
Sbjct: 304 MSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDH 363
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA---------GIIVLAPSVK-------- 160
PDE DP ALP + I F + + ++ P R G+ + +V
Sbjct: 364 PDEFYDPTALPVVEKIFFDGIYG-SEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHV 422
Query: 161 WQSQFVSG-FNSQVFPLPCPQLQNKTR 186
+Q F+ G +FP PC L +R
Sbjct: 423 FQCSFLQGQVFGTIFPKPCEDLGTSSR 449
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 107/224 (47%), Gaps = 35/224 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIE+ I +G+D + +K GW+ YGIA +P+SN+ + V + + +G+ GSE
Sbjct: 295 DSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSE 354
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI K +GRGG + I I ++E + + I + S H
Sbjct: 355 MSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFH 414
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ D +LP + I+F NV+ N A +GI I L+ PS W
Sbjct: 415 PDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSW 474
Query: 162 QSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSYPFNSCLQNFPNF 205
V GF+ V P PCP +Q+ + +PF+ +P F
Sbjct: 475 FCSNVIGFSEHVIPEPCPDIQSS-----YSKFPFSCFSSLYPLF 513
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 98/201 (48%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IEDCYI SG+D +AVK GW+ YGI P+ +I +RR++ +P + + +GSE
Sbjct: 197 DSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCISPDSAVIALGSE 256
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG +++I R + M+ +K + SH
Sbjct: 257 MSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTMKTMKYVFWMTSDYGSH 316
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI----------------IVLAP-SVK 160
PD+ D KA+PKI I++ VV+ N + GI + P ++
Sbjct: 317 PDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGICISDVTIRLTQKPKQLQ 376
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V G SQV P C L
Sbjct: 377 WNCTNVEGVTSQVTPQSCDLL 397
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V IEDC+I SG+D +AVK GW+ YG P+ ++ +RR++ +P + + +GSE
Sbjct: 244 DSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSE 303
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG +++I +R + ++ +K I SH
Sbjct: 304 MSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSH 363
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVK 160
PD+G DPKALP I+ I++ ++V+ N + V G+ ++
Sbjct: 364 PDDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEKPKELQ 423
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W V+G SQV P C L
Sbjct: 424 WNCTNVAGVTSQVTPRSCDLL 444
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IED +I SG+D +A+K GW+ YGI + PS I +RR++ +P + V +GSE
Sbjct: 247 DSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSE 306
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R T I+ GRG +++I ++ + + +K + H
Sbjct: 307 MSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
PD G DP ALPKI GI++ +V + N A GI I ++ K
Sbjct: 367 PDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG S V P PC LQ K
Sbjct: 427 WNCTDISGVTSNVVPKPCELLQEK 450
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +A+K GW+ YGIA RPSS+I +R V+ + +G+ IGSE
Sbjct: 270 DSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSE 329
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG I NI+ R I + V+ I I N H
Sbjct: 330 MSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEH 389
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
D+G D A P I ISF + ++ PVRA
Sbjct: 390 ADDGYDRTAFPDITSISFKGIHG-QGVRVPVRA 421
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 92/196 (46%), Gaps = 29/196 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIEDCYI G+D +A+K GW+ YG + PS +I +RR++ + T +G+ GSE
Sbjct: 198 DSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVRRITVHSKTSAGIAFGSE 257
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG I N+T+ + M V I H
Sbjct: 258 MSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVDMHSVGTAIAFTGNYGEH 317
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PDE + P I IS NVV N A + G+ I LA S W
Sbjct: 318 PDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNIHLANIALDVKSESDDWN 377
Query: 163 SQFVSGFNSQVFPLPC 178
V+G V+P PC
Sbjct: 378 CSSVAGTYFFVWPQPC 393
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 29/202 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED I+ G D +++K GW+ YGIA RP+ ++ +RRV + + S + GSE
Sbjct: 231 DSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRRVYLQSSSGSSIAFGSE 290
Query: 72 MSGGI----------FNARTKID----KGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI +N+ + I+ KGRGG I+ I I ++++ + + SH
Sbjct: 291 MSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVELKNINMAFGAIGDCGSH 350
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAG---------------IIVLAPSVKWQ 162
PD+ DP A+P + I+ NV N A G + + A S W
Sbjct: 351 PDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSICLFNVSLTIPATSTSWT 410
Query: 163 SQFVSGFNSQVFPLPCPQLQNK 184
V GF+ V P PCP+L +
Sbjct: 411 CSNVIGFSEFVSPEPCPELNSS 432
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 100/205 (48%), Gaps = 32/205 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ +GI P+ + +RR++ +P + + +GSE
Sbjct: 262 DSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSE 321
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I +R + M +K + S+
Sbjct: 322 MSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSY 381
Query: 118 PDEGR-DPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK-- 160
+ DPKALP+I+GI++ +VV+ N A GI I +A
Sbjct: 382 ANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANEK 441
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L +K
Sbjct: 442 PWTCTDIEGITSGVTPKPCNSLLDK 466
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 33/203 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++V IEDCYI SG+D VA+K GW+ YGI+ PS +I +RR++ +PT + + +GSE
Sbjct: 206 DSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSE 265
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + ++ R + + +K + SH
Sbjct: 266 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSH 325
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIK----------APVRAGIIV------LAPSVK- 160
PD+ DP A+P + IS+ +VV+ K AP R GI V L+ S K
Sbjct: 326 PDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR-GICVANVTADLSKSRKY 384
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQ 182
W + G ++ V P PC LQ
Sbjct: 385 PWNCADIEGVSANVSPAPCDPLQ 407
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +AVK GW+ YGIA RPS NI +R V + +G+ IGSE
Sbjct: 52 DSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSE 111
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I +I+ R I + V+ I I N H
Sbjct: 112 MSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEH 171
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA------------------GIIVLAPSV 159
D+G D A P I ISF + ++ PVRA GI +
Sbjct: 172 ADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI 230
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q F+ G VFP PC L
Sbjct: 231 -FQCSFIEGRVIGSVFPKPCENLD 253
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 33/203 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++V IEDCYI SG+D VA+K GW+ YGI+ PS +I +RR++ +PT + + +GSE
Sbjct: 273 DSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSE 332
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + ++ R + + +K + SH
Sbjct: 333 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSH 392
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIK----------APVRAGIIV------LAPSVK- 160
PD+ DP A+P + IS+ +VV+ K AP R GI V L+ S K
Sbjct: 393 PDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR-GICVANVTADLSKSRKY 451
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQ 182
W + G ++ V P PC LQ
Sbjct: 452 PWNCADIEGVSANVSPAPCDPLQ 474
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +AVK GW+ YGIA RPS NI +R V + +G+ IGSE
Sbjct: 293 DSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSE 352
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I +I+ R I + V+ I I N H
Sbjct: 353 MSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIHDISYRNITFDNVRAGIVIKVDYNEH 412
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA------------------GIIVLAPSV 159
D+G D A P I ISF + ++ PVRA GI +
Sbjct: 413 ADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI 471
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q F+ G VFP PC L
Sbjct: 472 -FQCSFIEGRVIGSVFPKPCENLD 494
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI +P+ ++ +RR++ +P + + +GSE
Sbjct: 72 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAVIALGSE 131
Query: 72 MSGGIFNAR----------------TKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
MSGGI + R T + +G +++I ++ + + +K +
Sbjct: 132 MSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMKYVFWMTGSYG 191
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PS 158
SHPD G DPKALP I GI++ +VV+ N + GI I ++
Sbjct: 192 SHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNVSIQVSEQRKK 251
Query: 159 VKWQSQFVSGFNSQVFPLPCPQLQNKTRF 187
++W V+G S V P C L K +
Sbjct: 252 LQWNCTDVAGVTSNVSPNSCQLLPEKGKL 280
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSE 304
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I +R + + +K + SH
Sbjct: 305 MSGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLA---PSVK 160
PD+G DP ALP I I++ ++V+ N + GI I L ++
Sbjct: 365 PDKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQ 424
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L K
Sbjct: 425 WNCTDIEGVTSNVNPRPCSLLPGK 448
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 33/203 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++V IEDCYI SG+D VA+K GW+ YGI+ PS +I +RR++ +PT + + +GSE
Sbjct: 253 DSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSE 312
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + ++ R + + +K + SH
Sbjct: 313 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSH 372
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIK----------APVRAGIIV------LAPSVK- 160
PD+ DP A+P + IS+ +VV+ K AP R GI V L+ S K
Sbjct: 373 PDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR-GICVANVTADLSKSRKY 431
Query: 161 -WQSQFVSGFNSQVFPLPCPQLQ 182
W + G ++ V P PC LQ
Sbjct: 432 PWNCADIEGVSANVSPAPCDPLQ 454
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +AVK GW+ YGIA RPS NI +R V + +G+ IGSE
Sbjct: 237 DSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSE 296
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I +I+ R I + V+ I I N H
Sbjct: 297 MSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA------------------GIIVLAPSV 159
D+G D A P I ISF + ++ PVRA GI +
Sbjct: 357 ADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI 415
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q F+ G VFP PC L
Sbjct: 416 -FQCSFIEGRVIGSVFPKPCENLD 438
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +AVK GW+ YGIA RPS NI +R V + +G+ IGSE
Sbjct: 60 DSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSE 119
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I +I+ R I + V+ I I N H
Sbjct: 120 MSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEH 179
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA------------------GIIVLAPSV 159
D+G D A P I ISF + ++ PVRA GI +
Sbjct: 180 ADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI 238
Query: 160 KWQSQFVSG-FNSQVFPLPCPQLQ 182
+Q F+ G VFP PC L
Sbjct: 239 -FQCSFIEGRVIGSVFPKPCENLD 261
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED IE G D +++K GW+ YGIA RP++++ +RRV + + S V GSE
Sbjct: 233 DSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSSSGSSVAFGSE 292
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N + KGRGG I+ I I ++++ SH
Sbjct: 293 MSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTAFGAIGDCGSH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII------------------VLAPSV 159
PD+ DP A+P + I+ V+ N A G+ L+P
Sbjct: 353 PDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSLAIRNTLSP-- 410
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQNKTR-FSWVTSY 193
W V GF+ V P PCP+L++ + +S + SY
Sbjct: 411 -WTCSNVVGFSESVSPEPCPELESSSVCYSLLNSY 444
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI+ P+ ++ +RR++ +P + + +GSE
Sbjct: 237 DSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSE 296
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG ++NI ++ + + +K + +H
Sbjct: 297 MSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP ALP+I GI++ ++V+ N A GI I +A K
Sbjct: 357 ADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAI 416
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V G S V P PC L +
Sbjct: 417 WMCSDVEGVTSGVDPKPCDLLDGQ 440
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI+ P+ ++ +RR++ +P + + +GSE
Sbjct: 237 DSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSE 296
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG ++NI ++ + + +K + +H
Sbjct: 297 MSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D DP ALP+I GI++ ++V+ N A GI I +A K
Sbjct: 357 ADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAI 416
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V G S V P PC L +
Sbjct: 417 WMCSDVEGVTSGVDPKPCDLLDGQ 440
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCIEDCYI G+D +A+K GW+ YG A PS +I +RR+ + T +G+ GSE
Sbjct: 241 DSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSETSAGIAFGSE 300
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG I NIT+ + M V I H
Sbjct: 301 MSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTAIAFTGNYGEH 360
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA--------PSVKWQ 162
PDE + P I + N+V + A + G+ I LA S W
Sbjct: 361 PDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIHLANIALDTKSESEDWN 420
Query: 163 SQFVSGFNSQVFPLPCPQLQNK 184
V+G V+P PCP +
Sbjct: 421 CSSVAGTYFFVWPQPCPDFTKE 442
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI +G+D +A+K GW+ +GIA RPS+NI +R + + +GV IGSE
Sbjct: 281 DSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSE 340
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I NIT + + ++ V++ I I N H
Sbjct: 341 MSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEH 400
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
D+ D KA P + G SF + ++ PVR
Sbjct: 401 ADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR 431
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI +G+D +A+K GW+ +GIA RPS+NI +R + + +GV IGSE
Sbjct: 281 DSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSE 340
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I NIT + + ++ V++ I I N H
Sbjct: 341 MSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEH 400
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
D+ D KA P + G SF + ++ PVR
Sbjct: 401 ADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR 431
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI +G+D +A+K GW+ +GIA RPS+NI +R + + +GV IGSE
Sbjct: 308 DSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSE 367
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I NIT + + ++ V++ I I N H
Sbjct: 368 MSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEH 427
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
D+ D KA P + G SF + ++ PVR
Sbjct: 428 ADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR 458
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI +G+D +A+K GW+ +GIA RPS+NI +R + + +GV IGSE
Sbjct: 281 DSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSE 340
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I NIT + + ++ V++ I I N H
Sbjct: 341 MSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEH 400
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
D+ D KA P + G SF + ++ PVR
Sbjct: 401 ADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR 431
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI+ P+ + +RR++ +P + + +GSE
Sbjct: 240 DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSE 299
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I +R + + +K + SH
Sbjct: 300 MSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSH 359
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D D A P+I GI++ +VV+ N A GI I LA K
Sbjct: 360 ADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQP 419
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W + G S V P PC L ++
Sbjct: 420 WTCTDIQGITSGVTPTPCGLLPDQ 443
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 15/134 (11%)
Query: 20 EDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI--- 76
EDCY+ +G+D +A+K GW+ YGI+ RPSSNI +RR++ +TP +SG+ IGSEMSGGI
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSEMSGGIRDI 59
Query: 77 -----------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPK 125
R K + GRGG I NIT +I ++ V I+ + HPD +P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 126 ALPKIRGISFVNVV 139
ALP + I+ +NVV
Sbjct: 120 ALPVVGDIAVLNVV 133
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTY---SGVGI 68
D S +VCIEDCYI G+D +++K GW+ YGI+ PS +I +RR+ + T+ +GV
Sbjct: 215 DSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRRIVSASKTFGIHAGVSF 274
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSEMSGGI N R K GRGG I+++ + + + VK +
Sbjct: 275 GSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHNLLLHSVKTAVAFMANY 334
Query: 115 NSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAG----------IIVLAPSVK---- 160
HPD+ + A P I I N+V N +A + G + +A V+
Sbjct: 335 GQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFRHIHLKTIALDVRSTKN 394
Query: 161 -WQSQFVSGFNSQVFPLPCPQL--QNKT 185
W +VSG V P PC L QN T
Sbjct: 395 VWNCSWVSGSYFFVVPQPCADLTRQNIT 422
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 97/201 (48%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCIE+ I +G+D V +K GW+ YGIA +P+S++ + V + + +G+ GSE
Sbjct: 250 DSSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSE 309
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI K KGRGG + I I ++E + + I + S H
Sbjct: 310 MSGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFH 369
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ D ALP + I+F NV+ N A +GI I L+ PS W
Sbjct: 370 PDDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSW 429
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
V GF+ V P PCP LQ
Sbjct: 430 FCSNVIGFSEDVIPEPCPDLQ 450
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED I G+D V++K GW+ YGI RP++ + +R +S +PT +G+ GSE
Sbjct: 230 DSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSE 289
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + +GRGG I NITI + + V I + SH
Sbjct: 290 MSGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSH 349
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP------SVKWQSQ 164
PD+ D ALP + I N V+ A GI I L S W
Sbjct: 350 PDDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLHTHSDSWICS 409
Query: 165 FVSGFNSQVFPLPCPQLQNK 184
VSGF+ V P PC +L +
Sbjct: 410 NVSGFSDDVSPEPCQELMSS 429
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
TD +N+CIED I +D +++K GW++YGI + RP+S+I + RV + + GS
Sbjct: 142 TDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGS 201
Query: 71 EMSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
EMSGGI + K GRGG I ++ I ++ME V + I+ ++
Sbjct: 202 EMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWST 261
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSV 159
HPD DP ALP I I+ N+V N A V +GI I L+ S
Sbjct: 262 HPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSS 321
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQN 183
W +SG++ VFP PCP L +
Sbjct: 322 SWSCSNISGYSELVFPEPCPDLHH 345
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 32/199 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D T VCIEDC I SG D V+VK GW+ YGI + PS+ + +RR++ P + + GSE
Sbjct: 228 DSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRRITAQAPASAAIAFGSE 287
Query: 72 MSGGI----------FNAR----TKIDKGRGGNIENITIRYIKMERVKIPIRI-GRGSNS 116
MSGGI FN++ K GRGG ++NI++ + M+ V I + G S+
Sbjct: 288 MSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSE 347
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVL-----APSV 159
HPDEG DP A P +RGI V N A G+ I L +
Sbjct: 348 HPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDEASQGS 407
Query: 160 KWQSQFVSGFNSQVFPLPC 178
KW V G + V P PC
Sbjct: 408 KWDCSNVKGASLGVTPTPC 426
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I +D +++K GW+ GIA RP+S+I + R+ + + + GSE
Sbjct: 233 DSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSE 292
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG I + I ++ME V + I SH
Sbjct: 293 MSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL-----------APSV 159
PD+ DP ALP + I+ N+ A V +GI I L +P+
Sbjct: 353 PDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTS 412
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQNKTRFSWVTS 192
W VSG++ VFP PC LQ ++ + V S
Sbjct: 413 HWSCSNVSGYSELVFPEPCLDLQTQSSDASVCS 445
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 96/201 (47%), Gaps = 31/201 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D VAVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 247 DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSE 306
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I ++ + M +K I SH
Sbjct: 307 MSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ + ALP+I+ I + ++V+ N A GI I +A K
Sbjct: 367 ADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQL 181
W + G S V P PC L
Sbjct: 427 WTCNDIEGITSGVTPKPCDLL 447
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 32/199 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D T VCIEDC I SG D V+VK GW+ YGI + PS+ + +RR++ P + + GSE
Sbjct: 228 DSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRRITAQAPASAAIAFGSE 287
Query: 72 MSGGI----------FNAR----TKIDKGRGGNIENITIRYIKMERVKIPIRI-GRGSNS 116
MSGGI FN++ K GRGG ++NI++ + M+ V I + G S+
Sbjct: 288 MSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSE 347
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVL-----APSV 159
HPDEG DP A P +RGI V N A G+ I L +
Sbjct: 348 HPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDDASQGS 407
Query: 160 KWQSQFVSGFNSQVFPLPC 178
KW V G + V P PC
Sbjct: 408 KWDCSNVKGASLGVTPTPC 426
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 32/206 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I +D +++K GW+ GIA RP+S+I + R+ + + + GSE
Sbjct: 233 DSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGSE 292
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG I + I ++ME V + I SH
Sbjct: 293 MSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL-----------APSV 159
PD+ DP ALP + I+ N+ A V +GI I L +P+
Sbjct: 353 PDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTS 412
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQNKT 185
W VSG++ VFP PC LQ ++
Sbjct: 413 HWSCSNVSGYSELVFPEPCLDLQTQS 438
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 21 DCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNAR 80
DCYI SG+D VAVK GW+ YGIA P+ + +RR++ +P + + +GSEMSGGI + R
Sbjct: 246 DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 305
Query: 81 T--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKA 126
K GRGG +++I ++ + M +K + SH D+ DP A
Sbjct: 306 AEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGSHADKNYDPNA 365
Query: 127 LPKIRGISFVNVVSVNTIKAP-----------------VRAGIIVLAPSVKWQSQFVSGF 169
LP I GI++ ++V+ N A V G+ A + W + G
Sbjct: 366 LPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAKAKKIPWTCTDIEGI 425
Query: 170 NSQVFPLPCPQLQNK 184
+ V P PC L ++
Sbjct: 426 TTGVSPRPCDLLPDQ 440
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V IE+CYI G+D +A+K GW+ YGIA R SSNI +R V+ + +G+ IGSE
Sbjct: 270 DSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSE 329
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG I NI+ I + V+ I I N H
Sbjct: 330 MSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEH 389
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
D+G D A P I GISF + ++ PVRA
Sbjct: 390 ADDGYDRNAFPDITGISFKKIHG-RGVRVPVRA 421
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 31/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV IED YI SG+D +A+K G + YGI + +PS I +RR++ +P + V +GSE
Sbjct: 247 DSCTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSE 306
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I ++ + + +K + SH
Sbjct: 307 MSGGIQDIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSH 366
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVK----- 160
+ G DPKALPKI GI++ ++++ N A GI + + S +
Sbjct: 367 AENGFDPKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLP 426
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W VSG S P PC L K
Sbjct: 427 WNCTDVSGVASNAVPKPCDMLPEK 450
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I +D +++K GW++YGI + RP+S+I + RV + + GSE
Sbjct: 235 DSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG I ++ I ++ME V + I+ ++H
Sbjct: 295 MSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PD DP ALP I I+ N+V N A V +GI I L+ S
Sbjct: 355 PDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSS 414
Query: 161 WQSQFVSGFNSQVFPLPCPQLQN 183
W +SG++ VFP PCP L +
Sbjct: 415 WSCSNISGYSELVFPEPCPDLHH 437
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 29/204 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N IEDCYI SG+D VA+K GW+ GI PS +I +RR+ +P + + +GSE
Sbjct: 245 DSCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSE 304
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG + +I ++ + + +K + SH
Sbjct: 305 MSGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSH 364
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII------VLAPSV---------KWQ 162
P+ DPKALP I GI++ +V++ N + GI + +V +W
Sbjct: 365 PNTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTIHSGKKKPQWN 424
Query: 163 SQFVSGFNSQVFPLPCPQLQNKTR 186
+ G S V+P PC L K +
Sbjct: 425 CTDIEGVTSNVYPKPCELLPLKEK 448
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 15/134 (11%)
Query: 20 EDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI--- 76
EDCY+ +G+D +A+K GW+ YGI+ RPSSNI +RR++ +TP +SG+ IGSE SGGI
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDI 59
Query: 77 -----------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPK 125
R K + GRGG I NIT +I ++ V I+ + HPD +P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 126 ALPKIRGISFVNVV 139
ALP + I+ +NVV
Sbjct: 120 ALPVVGDIAVLNVV 133
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I +D +++K GW++YGI + RP+S+I + RV + + GSE
Sbjct: 202 DSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSE 261
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG I ++ I ++ME V + I+ ++H
Sbjct: 262 MSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTH 321
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PD DP ALP I I+ N+V N A V +GI I L+ S
Sbjct: 322 PDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSS 381
Query: 161 WQSQFVSGFNSQVFPLPCPQLQN 183
W +SG++ VFP PCP L +
Sbjct: 382 WSCSNISGYSELVFPEPCPDLHH 404
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 15/134 (11%)
Query: 20 EDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI--- 76
EDCY+ +G+D +A+K GW+ YGI+ RPSSNI +RR++ +TP +SG+ IGSE SGGI
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDI 59
Query: 77 -----------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPK 125
R K + GRGG I NIT +I ++ V I+ + HPD +P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 126 ALPKIRGISFVNVV 139
ALP + I+ +NVV
Sbjct: 120 ALPVVGDIAVLNVV 133
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 94/201 (46%), Gaps = 28/201 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED I G+D V++K GW+ YGI RP++ + +R + +PT +G+ GSE
Sbjct: 230 DSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSE 289
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + + +GRGG I NITI + + V I + SH
Sbjct: 290 MSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSH 349
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-------PSVKWQS 163
PD+ D ALP + I N V+ A GI I LA W
Sbjct: 350 PDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEESWIC 409
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
VSGF+ V P PC +L +
Sbjct: 410 SNVSGFSDDVSPEPCQELMSS 430
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 94/201 (46%), Gaps = 28/201 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED I G+D V++K GW+ YGI RP++ + +R + +PT +G+ GSE
Sbjct: 230 DSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSE 289
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + + +GRGG I NITI + + V I + SH
Sbjct: 290 MSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTGSH 349
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-------PSVKWQS 163
PD+ D ALP + I N V+ A GI I LA W
Sbjct: 350 PDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEESWIC 409
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
VSGF+ V P PC +L +
Sbjct: 410 SNVSGFSDDVSPEPCQELMSS 430
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 94/201 (46%), Gaps = 28/201 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED I G+D V++K GW+ YGI RP++ + +R + +PT +G+ GSE
Sbjct: 232 DSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSE 291
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + + +GRGG I NITI + + V I + SH
Sbjct: 292 MSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA-------PSVKWQS 163
PD+ D ALP + I N V+ A GI I LA W
Sbjct: 352 PDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEESWIC 411
Query: 164 QFVSGFNSQVFPLPCPQLQNK 184
VSGF+ V P PC +L +
Sbjct: 412 SNVSGFSDDVSPEPCQELMSS 432
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 31/200 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCI D YI +G+D VAVK GW+ YG+A RPS ++ + V+ T G+ +GSE
Sbjct: 251 DSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLTVSGSHGISLGSE 308
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI+N K GRG I N + ++ + H
Sbjct: 309 MSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDH 368
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKA---------PVR------AGIIVLAPSVKWQ 162
PD G + A I ISF +VV + +A P R + + S W
Sbjct: 369 PDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSNHWN 428
Query: 163 SQFVSGFNSQVFPLPCPQLQ 182
++ G++ V P PCP+LQ
Sbjct: 429 CSYIEGYSRHVSPPPCPELQ 448
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 31/200 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCI D YI +G+D VAVK GW+ YG+A RPS ++ + V+ T G+ +GSE
Sbjct: 222 DSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLTVSGSHGISLGSE 279
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI+N K GRG I N + ++ + H
Sbjct: 280 MSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDH 339
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKA---------PVR------AGIIVLAPSVKWQ 162
PD G + A I ISF +VV + +A P R + + S W
Sbjct: 340 PDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELNGKSNHWN 399
Query: 163 SQFVSGFNSQVFPLPCPQLQ 182
++ G++ V P PCP+LQ
Sbjct: 400 CSYIEGYSRHVSPPPCPELQ 419
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV +E+CYI G+D VAVK GW+ YGI RP N+T+R V + +G+ IGSE
Sbjct: 229 DSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARSQISAGISIGSE 288
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ R K GRGG ++NI + + + V++ I + H
Sbjct: 289 MSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTLIDVRVGIVVKTDYGEH 348
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD DPKALP + ISF V ++++ PVR
Sbjct: 349 PDLDFDPKALPVVANISFDGVYG-SSVRYPVR 379
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 15/134 (11%)
Query: 20 EDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI--- 76
EDCY+ +G+D +A+K GW+ YGI+ RPSSNI +RR++ +TP +SG+ IGSE SGGI
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDI 59
Query: 77 -----------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPK 125
R K + GRGG I NIT +I ++ V I+ + HPD +P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 126 ALPKIRGISFVNVV 139
ALP + I+ ++VV
Sbjct: 120 ALPVVGDIAVLDVV 133
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI CY+ +G+D++ +K GW+ YGI+ A+ SSNI++ ++G T +G+ IGSE
Sbjct: 235 DSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG + N+ I + M V + IRI H
Sbjct: 295 MSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD D ALP I I+ NVV ++ A + GI + + P W
Sbjct: 355 PDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRPRYPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ G+++ V P C QL+
Sbjct: 415 SRIQGYSNSVTPESCEQLK 433
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 34/205 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NV IE YI SG+D +A+K GW+ YGI P+ ++ +R ++ +PT + + +GSE
Sbjct: 203 DSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIALGSE 262
Query: 72 MSGGIFNAR----TKIDK----------GRGGNIENITIRYIKMERVKIPIRI-GRGSNS 116
MSGGI N R T ID GRG + NI +R + M+ +K + G S+S
Sbjct: 263 MSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTMKTMKYVFWMTGYYSSS 322
Query: 117 --HPDEGRDPKALPKIRGISFVNVVSVNT--------IKAPVRAGI------IVLAPSVK 160
HPD +P+ALP I GI+++++V+ N IK V GI I LA K
Sbjct: 323 RVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFKGICLSNVTIGLAKKPK 382
Query: 161 ---WQSQFVSGFNSQVFPLPCPQLQ 182
W + G S V P PC L+
Sbjct: 383 EMLWNCTNIEGVASGVTPQPCGFLR 407
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 19/121 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED +I +G+DLVAVK GW+ YGI RPSS+IT+RRV+G++P ++G+ +GSE
Sbjct: 100 DSSSNVCIEDSFISTGDDLVAVKSGWDEYGIGYGRPSSHITIRRVTGSSP-FAGIAVGSE 158
Query: 72 MSGG----------IFNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG I+N+ K + GRGG I+NIT+ + ME V+ I+I SH
Sbjct: 159 TSGGVEHVLAENIVIYNSGIGVNIKTNIGRGGFIKNITVSPVFMENVRTGIKIA----SH 214
Query: 118 P 118
P
Sbjct: 215 P 215
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 29/196 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCIEDCYI G+D +++K GW+ +G + A PS +I ++R+ + + +G+ GSE
Sbjct: 197 DSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQRILAFSRSSAGISFGSE 256
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG + I+++ I + ++ I + H
Sbjct: 257 MSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVLHSIRTAIAVMGNYGEH 316
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKA---------PVR----AGIIVLAPSVK--WQ 162
PDE + A P I I N+V N +A P R A I + + K W
Sbjct: 317 PDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIHLANIALQVNTTKQIWN 376
Query: 163 SQFVSGFNSQVFPLPC 178
V+G VFP PC
Sbjct: 377 CSDVAGSYIFVFPQPC 392
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 99/199 (49%), Gaps = 28/199 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCI CY+ +G+D++ +K GW+ YGI+ A+ SSNI++ ++G T +G+ IGSE
Sbjct: 235 DSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI R K GRGG + N+ I + M V + IRI H
Sbjct: 295 MSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQS 163
PD D ALP I I+ NVV ++ A + GI + + W
Sbjct: 355 PDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRSRYPWNC 414
Query: 164 QFVSGFNSQVFPLPCPQLQ 182
+ G+++ V P C QL+
Sbjct: 415 SRIQGYSNSVTPESCEQLK 433
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 94/201 (46%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCI++ I G D +++K GW+ YGIA +RP+ N+ +R V + S + GSE
Sbjct: 235 DSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSE 294
Query: 72 MSGGI----------FNARTKI----DKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N+ T I KGRGG I+ I I I M R+ I SH
Sbjct: 295 MSGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVANGSFGSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVL----APSVKW 161
PD+ D ALP + I N+ N A GI I L SV W
Sbjct: 355 PDDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSGSSVSW 414
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
Q +V G + V P PCP+L+
Sbjct: 415 QCSYVYGSSESVIPEPCPELK 435
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 31/202 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NV IED I +D +++K GW+ YGI++ +P+S+I + R+ + + + GSE
Sbjct: 235 DSSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG I+ + I +KM+ V + I +SH
Sbjct: 295 MSGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PDE DP LP I I+ ++V N A V +GI I L+ S
Sbjct: 355 PDEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSS 414
Query: 161 WQSQFVSGFNSQVFPLPCPQLQ 182
W VSG++ VFP PC +L
Sbjct: 415 WSCSNVSGYSESVFPEPCSELH 436
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 31/205 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I ++ +++K GW+ YGI+ RP+S+I + RV + + + + GSE
Sbjct: 226 DSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRVDLLSSSGAALAFGSE 285
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + K GRGG IE + I ++ME V + I ++H
Sbjct: 286 MSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCSTH 345
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA----------PSVK 160
PD+ D LP I ++ N+V N A V +GI I L+ S
Sbjct: 346 PDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAADTGSSS 405
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNKT 185
W VSG++ VFP PC +L++ +
Sbjct: 406 WSCSNVSGYSEAVFPEPCTELRDPS 430
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IE+ YI G+D +A+K GW+ YG RPS NI +R + + +G+ IGSE
Sbjct: 262 DSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRSMVSAGISIGSE 321
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + +IT R + ++ +++ I I N H
Sbjct: 322 MSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEH 381
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD G +P+A P + I++ + ++ PVR
Sbjct: 382 PDGGFNPQAFPILENINYTGIYG-QGVRVPVR 412
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCI++ I G D +++K GW+ YGIA +RP+ N+ +R V + S + GSE
Sbjct: 235 DSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + KGRGG I+ I I I M R+ I SH
Sbjct: 295 MSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ D ALP + I N+ N A GI + L+ SV W
Sbjct: 355 PDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSW 414
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
Q +V G + V P PCP+L+
Sbjct: 415 QCSYVYGSSESVIPEPCPELK 435
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCI++ I G D +++K GW+ YGIA +RP+ N+ +R V + S + GSE
Sbjct: 166 DSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSE 225
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + KGRGG I+ I I I M R+ I SH
Sbjct: 226 MSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSH 285
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ D ALP + I N+ N A GI + L+ SV W
Sbjct: 286 PDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSW 345
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
Q +V G + V P PCP+L+
Sbjct: 346 QCSYVYGSSESVIPEPCPELK 366
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCI++ I G D +++K GW+ YGIA +RP+ N+ +R V + S + GSE
Sbjct: 166 DSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSE 225
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + KGRGG I+ I I I M R+ I SH
Sbjct: 226 MSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSH 285
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLA---------PSVKW 161
PD+ D ALP + I N+ N A GI + L+ SV W
Sbjct: 286 PDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSW 345
Query: 162 QSQFVSGFNSQVFPLPCPQLQ 182
Q +V G + V P PCP+L+
Sbjct: 346 QCSYVYGSSESVIPEPCPELK 366
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IE+ YI G+D +A+K GW+ YG +PS NI +R + + +G+ IGSE
Sbjct: 259 DSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSE 318
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + +IT R + ++ +++ I I N H
Sbjct: 319 MSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEH 378
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD G +P+A P + I++ + ++ PVR
Sbjct: 379 PDGGFNPQAFPILENINYTGIYG-QGVRVPVR 409
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IE+ YI G+D +A+K GW+ YG +PS NI +R + + +G+ IGSE
Sbjct: 259 DSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSE 318
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + +IT R + ++ +++ I I N H
Sbjct: 319 MSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEH 378
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD G +P+A P + I++ + ++ PVR
Sbjct: 379 PDGGFNPQAFPILENINYTGIYG-QGVRVPVR 409
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 32/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCI+D I G D +++K GW+ YGI+ ARP++N+ ++ V + S + GSE
Sbjct: 233 DSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAASGSSISFGSE 292
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + GRGG I+ I I I M V +H
Sbjct: 293 MSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL-----------APSV 159
PD G D A P + I ++ N A G I+L +P+
Sbjct: 353 PDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISLSIKNSDSPAD 412
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQN 183
WQ +V G + V P PC +L++
Sbjct: 413 FWQCSYVDGSSEFVVPEPCLELKS 436
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 32/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCI++ I G D +++K G + YG++ ARP++N+ +R V + S + GSE
Sbjct: 233 DSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSE 292
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + GRGG I+ I I I M V +H
Sbjct: 293 MSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTH 352
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL-----------APSV 159
PD G D A P + I ++V N A G I+L +P+
Sbjct: 353 PDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPAD 412
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQN 183
WQ +V G + V P PC +L++
Sbjct: 413 SWQCSYVDGSSEFVVPEPCLELKS 436
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 32/204 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCI++ I G D +++K G + YG++ ARP++N+ +R V + S + GSE
Sbjct: 235 DSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + + GRGG I+ I I I M V +H
Sbjct: 295 MSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTH 354
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVL-----------APSV 159
PD G D A P + I ++V N A G I+L +P+
Sbjct: 355 PDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPAD 414
Query: 160 KWQSQFVSGFNSQVFPLPCPQLQN 183
WQ +V G + V P PC +L++
Sbjct: 415 SWQCSYVDGSSEFVVPEPCLELKS 438
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 84/179 (46%), Gaps = 35/179 (19%)
Query: 37 WNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA--------------RTK 82
W+ YGI+ RPS+NI +R + + +G+ IGSEMSGG+ N R K
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 83 IDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVN 142
GRGG +++IT R I E V++ I I N HPDEG D KA P ++ ISF+ V
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHG-Q 119
Query: 143 TIKAPVR------------------AGIIVLAPSVKWQSQFVSG-FNSQVFPLPCPQLQ 182
++ PVR G+ + +Q FV G +FP PC L
Sbjct: 120 GVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHI-FQCAFVQGRVIGSIFPAPCENLD 177
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 82/177 (46%), Gaps = 24/177 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGIA P+ + +RR++ +P + + +GSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSE 304
Query: 72 MSGGIFNARTK----IDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKAL 127
MSGGI + R + ID G I+ I Y M + + GR L
Sbjct: 305 MSGGIEDVRAEDILAIDTESGVRIKTAGINYRDMVAENVTM-----------AGR----L 349
Query: 128 PKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNSQVFPLPCPQLQNK 184
I G F + N V G+ A W ++G S V P PC L ++
Sbjct: 350 EGISGDPFTGICISN-----VTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQ 401
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 14/118 (11%)
Query: 36 GWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG----------IFNA----RT 81
GW+ YGI RPSSNI +RRV G T T SG+ +GSEMSGG IFN+ R
Sbjct: 2 GWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLRI 61
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
K GRGG ++++ I + M+ V + I HPD+ DP ALP I+ I+F +++
Sbjct: 62 KTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDII 119
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 14/118 (11%)
Query: 36 GWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG----------IFNA----RT 81
GW+ YGI RPSSNI +RRV G T T SG+ +GSEMSGG IFN+ R
Sbjct: 2 GWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLRI 61
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
K GRGG ++++ I + M+ V + I HPD+ DP ALP I+ I+F +++
Sbjct: 62 KTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDII 119
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 14/118 (11%)
Query: 36 GWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG----------IFNA----RT 81
GW+ YGI RPSSNI +RRV G T T SG+ +GSEMSGG IFN+ R
Sbjct: 2 GWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLRI 61
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
K GRGG ++++ I + M+ V + I HPD+ DP ALP I+ I+F +++
Sbjct: 62 KTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDII 119
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 14/118 (11%)
Query: 36 GWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG----------IFNA----RT 81
GW+ YGI RPSSNI +RRV G T T SG+ +GSEMSGG IFN+ R
Sbjct: 2 GWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLRI 61
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
K GRGG + ++ I + M+ V + I HPD+ DP ALP I+ I+F +++
Sbjct: 62 KTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDII 119
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 36 GWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG----------IFNA----RT 81
GW+ YGI RPSSNI +RRV G T T SG+ +GSEMSGG IFN+ R
Sbjct: 2 GWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLRI 61
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSV 141
K GRGG + ++ I + M+ V + I HPD+ DP ALP I+ I+F +++
Sbjct: 62 KTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIGX 121
Query: 142 NTIKAPVRAGI 152
A GI
Sbjct: 122 EIKTAGSVEGI 132
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 78/190 (41%), Gaps = 56/190 (29%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI A
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKTAV------------------------- 272
Query: 72 MSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIR 131
GRG +++I R I M+ +K + SHPDEG DPKALP+I
Sbjct: 273 --------------GRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEIT 318
Query: 132 GISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK---WQSQFVSGFNSQVF 174
I++ ++ + N + GI I LA K W V+G S+V
Sbjct: 319 NINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVT 378
Query: 175 PLPCPQLQNK 184
P PC L K
Sbjct: 379 PEPCSLLPEK 388
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V I++C G+D +AVK GW++ GI P++++ +R ++ TPT + + IGSE
Sbjct: 248 DSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHTPTSAAIAIGSE 307
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K +GRGG + N+T + + VK + I H
Sbjct: 308 MSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKTALSINDFYGQH 367
Query: 118 PDEGRDPKALPKIRGISFVNVV 139
DP A+P I I N+V
Sbjct: 368 ESIFYDPLAVPIIDSIFMSNIV 389
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 14/118 (11%)
Query: 36 GWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG----------IFNA----RT 81
GW+ YGI RPSSNI +RRV G T T SG+ +GSEMSGG IFN+ R
Sbjct: 2 GWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLRI 61
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
K GRGG + ++ I + M+ V + I HPD+ DP AL I+ I+F +++
Sbjct: 62 KTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDII 119
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D + +V I DCY +G+D VA+K GW+ YG + S+NIT+ +P +G+ +GSE
Sbjct: 263 DSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHSPNAAGICLGSE 322
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMER-VKIPIRIGRGSNS 116
MSGGI N R K GRGG + N+T+ + +E +++ +
Sbjct: 323 MSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQLAVGYNGHYGG 382
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------------IVLAPSVKWQSQ 164
HP G +P A P + IS +N N + G+ + + W
Sbjct: 383 HP-AGYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNVHITGKQGWTCS 441
Query: 165 FVSGFNSQVFPLPCPQL 181
+SG V P CP L
Sbjct: 442 DISGTAQNVTPAACPSL 458
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S+ V IEDCYI SG+D VAVK GW+ YGI PS +I ++R++ +PT + + + SEMS
Sbjct: 149 SSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIALSSEMS 208
Query: 74 GGIFNARTK 82
GGI + R K
Sbjct: 209 GGIRDVRAK 217
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 31/210 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NV IED G+D VA+K GW+ +GI PS NIT+R V+ P Y+G+ IG+E
Sbjct: 210 DSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGP-YAGIAIGTE 268
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKME-RVKIPIRIG----- 111
MSGG+ N A K RGG + ++ + I++ + I +
Sbjct: 269 MSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHIDQAIHVDMYHYH 328
Query: 112 RGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNS 171
N P LP +R + F N + V P + F+ +
Sbjct: 329 NTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPIEYVFLENIS- 387
Query: 172 QVFPLP-------CPQLQNKTRFSWVTSYP 194
FP P C +Q + + VT +P
Sbjct: 388 --FPTPVSSLGWNCSNVQGSVKNNSVTPWP 415
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++V IEDCYI SG+D VA+K GW+ YGI+ PS +I +RR++ +PT + + +GSE
Sbjct: 246 DSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSE 305
Query: 72 MSGGIFNA 79
MSGG A
Sbjct: 306 MSGGGVRA 313
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN+ +EDCYI SG+D +AVK N G+ P+ + +RR++ +P + + +G E
Sbjct: 229 DSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISPHSAVIALGRE 288
Query: 72 MSGGI-------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
M+G + F R K RGG +++I +R + M+ ++ I P
Sbjct: 289 MAGXMNVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPP 348
Query: 119 DEGRDPKALPKIRGISFVNVVSVNTIK-----------------APVRAGIIVLAPSVKW 161
G + P I GI++ ++V+ N + V G+ + +W
Sbjct: 349 APGHEG---PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQW 405
Query: 162 QSQFVSGFNSQVFPLPCPQL 181
V G S+V P PC L
Sbjct: 406 DCDEVQGITSRVTPQPCDLL 425
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C+ ++G+D +A+K G N G + PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIEHCFFDTGDDCIAIKSGRNADGRRLNIPSENIVIRHCE-MRAGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG IENI +R I++ +VK I I N H +
Sbjct: 333 VRNVYAHDNRMSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVI----NFHYE 388
Query: 120 EGRDPKALPKIRGISFVNV 138
EG K P +R I+ N+
Sbjct: 389 EGDAGKFDPTVRNINLDNI 407
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IEDCY ++G+D +A+K G NH G + RPS NI +R + GV IGSEMSGG+
Sbjct: 299 VLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCH-MRRGHGGVVIGSEMSGGV 357
Query: 77 FNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
N R K + RGG +EN R I + VK I I + +E
Sbjct: 358 RNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVI----DFQYEE 413
Query: 121 GRDPKALPKIRGISF 135
G + P +R I F
Sbjct: 414 GDAGEHTPIVRNIDF 428
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V IEDC+I SG+D +AVK GW+ YG P+ ++ +RR++ +P + + +GSE
Sbjct: 244 DSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSE 303
Query: 72 MSGGIFNA--------------RTKIDKGRGGNI 91
MSGGI N R K GRGG I
Sbjct: 304 MSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 40/168 (23%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT----------- 60
D NV +E CYI +G+D +A+K G +A+ P++N+T+R V
Sbjct: 728 DSCQNVLVERCYISTGDDCIAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGS 787
Query: 61 ------------PTYSGVGIGSEMSGGIFN--------------ARTKIDKGRGGNIENI 94
T G+ IGSEMSGGI++ R K GRGG++ N+
Sbjct: 788 YALCRGQIRTDCTTGHGISIGSEMSGGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNV 847
Query: 95 TIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVN 142
T R + ++ V + I + NS G ALP I NV++ N
Sbjct: 848 TYRNMVIDSVDTAVLINQDYNSVTCVG---DALPNFSDILVQNVIANN 892
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +VCI++C I +G+D + +K GW+ YG+A +P+SN+ +R V + + +G+ GSE
Sbjct: 116 DSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSE 175
Query: 72 MSGGI 76
MSGGI
Sbjct: 176 MSGGI 180
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 21/146 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C+ +G+D +A+K G N+ G +A P+ N+ +R + GV IGSE+SGG
Sbjct: 272 NVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCK-MEAGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG +ENI +R + V+ I I N +
Sbjct: 331 VRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVI----NFQYE 386
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIK 145
EG K P +R + N+V + ++
Sbjct: 387 EGDAGKFDPTVRNVEIRNLVCQHALQ 412
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 82 KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSV 141
K GRGG IE++ I ++ME V + I ++HPD+ DP LP I ++ N+
Sbjct: 25 KTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGT 84
Query: 142 NTIKAPVRAGI-------IVLA-----------PSVKWQSQFVSGFNSQVFPLPCPQLQN 183
N A V +GI I L+ PS W VSG++ VFP PC +L++
Sbjct: 85 NISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPS-SWSCSDVSGYSEAVFPEPCTELRD 143
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 21/140 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V IE C ++G+D +A+K G N G + + N+ +R + G+ +GSE+SGG
Sbjct: 298 HVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQ-MKDGHGGLVLGSEISGG 356
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
++N R K + RGG IE I IR +++ VK + I N +
Sbjct: 357 VYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSI----NFFYE 412
Query: 120 EGRDPKALPKIRGISFVNVV 139
EG++ + LP++R I N+V
Sbjct: 413 EGQEGRFLPEVRDIHIDNLV 432
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V I +CYI+ G+D + +K G+N +G P NI + + S VGIGSE
Sbjct: 212 DCCNGVRISNCYIDCGDDCITLKSGYNEHGRKKGIPCENIVISNCT-FAHGRSAVGIGSE 270
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K +GRGG +ENI I ME ++ I I G
Sbjct: 271 MSGGIKNVTVMNCVFKGTLRGLRVKTGRGRGGTVENIFASGIIMENLREGISIDMGY--- 327
Query: 118 PDEGRDPK------ALPKIRGISFVNVVSVNTIKA 146
EG K + P + I F +++ N +A
Sbjct: 328 --EGVSGKIYPVTESTPFFKNIRFKDIIGTNVEQA 360
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NV I DC+ + G+D + +K G + G + RP+ N+ + + + GV +GSE
Sbjct: 220 DSCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGHGGVVLGSE 278
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+GGI N R K ++ RGG +EN+ I I ME V P+ I
Sbjct: 279 TAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHG 338
Query: 118 PDEGR----DPKALPKIRG---ISFVNVVSVNTIKAPVRAGIIVLAPSV 159
DE P+A+P G I + + V A AG I P +
Sbjct: 339 IDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEM 387
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NV I DC+ + G+D + +K G + G + RP+ N+ + + + GV +GSE
Sbjct: 219 DSCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGHGGVVLGSE 277
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+GGI N R K ++ RGG +EN+ I I ME V P+ I
Sbjct: 278 TAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHG 337
Query: 118 PDEGR----DPKALPKIRG---ISFVNVVSVNTIKAPVRAGIIVLAPSV 159
DE P+A+P G I + + V A AG I P +
Sbjct: 338 IDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEM 386
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NV I DC+ + G+D + +K G + G + RP+ N+ + + + GV +GSE
Sbjct: 220 DSCSNVRISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCT-MLHGHGGVVLGSE 278
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+GGI N R K ++ RGG +EN+ I I ME V P+ I
Sbjct: 279 TAGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHG 338
Query: 118 PDEGR----DPKALPKIRG---ISFVNVVSVNTIKAPVRAGIIVLAPSV 159
DE P+A+P G I + + V A AG I P +
Sbjct: 339 IDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEM 387
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
D S NV IEDC + G+D + +K G + G + RP+ ++ +R + G+ GS
Sbjct: 218 VDSSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGS 276
Query: 71 EMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
E++GG+ N R K +GRGG +EN+ I I MERV +P+ + N
Sbjct: 277 EIAGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVV----NL 332
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII--VLAPSVKWQSQFVSGF 169
+ G DP + ++ + + V+ VR I VLA VK + F+ G
Sbjct: 333 YYRCGIDPGEEEIVSRLASLLPLPVDETTPAVRNISISQVLATGVKSSAGFLLGL 387
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI +G+D + +K G + G + P+S IT+ + + GV IGSE
Sbjct: 216 DSSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCT-VEAGHGGVVIGSE 274
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSG + + R K +GRGG +E++ I M R+ P I +
Sbjct: 275 MSGDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTP 334
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P + P +R +SF N+ + N A AG+
Sbjct: 335 LDSDPEPTGEGTPLVRNVSFSNITARNVETAGFFAGL 371
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI +G+D + +K G + G + P+S IT+ + + GV IGSE
Sbjct: 216 DSSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVVIGSE 274
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSG + + R K +GRGG +E++ I M R+ P I +
Sbjct: 275 MSGDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTP 334
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P + P +R +SF N+ + N A AG+
Sbjct: 335 LDSDPEPIDEGTPLVRNVSFSNITARNVETAGFFAGL 371
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI +G+D + +K G + G + P+S IT+ + + GV IGSE
Sbjct: 238 DSSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVVIGSE 296
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSG + + R K +GRGG +E++ I M R+ P I +
Sbjct: 297 MSGDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTP 356
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P + P +R +SF N+ + N A AG+
Sbjct: 357 LDSDPEPIDEGTPLVRNVSFSNITARNVETAGFFAGL 393
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
D S NV IEDC + G+D + +K G + G + RP+ ++ +R + G+ GS
Sbjct: 218 VDSSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGS 276
Query: 71 EMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
E++GG+ N R K +GRGG +EN+ + I MERV +P+ + N
Sbjct: 277 EIAGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVV----NL 332
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGII--VLAPSVKWQSQFVSGF 169
+ G DP I ++ + + V+ VR I V A VK + F+ G
Sbjct: 333 YYRCGIDPGEEETISRLASLLPLPVDETTPAVRNISISQVFATGVKSSAGFLLGL 387
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I DCY+ +G+D V +K G + G + RP+S IT+ + + GV IGSE
Sbjct: 215 DSSRYVRISDCYLNAGDDAVCIKSGKDEEGRRIGRPASGITVTNCT-VEAGHGGVVIGSE 273
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSG + + R K +GRGG +E+ + M RV P I
Sbjct: 274 MSGDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTI--NGYYF 331
Query: 118 PDEGRDP----KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D DP ++ P +R I++ ++++ + A AG+
Sbjct: 332 MDIDSDPIPVDESTPMVRNIAYSDIIARDVETAGFFAGL 370
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 64 SGVGIGSEMSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIR 109
+G+ +GSEMSGGI N R K GRGG +++I +R + ++ +K
Sbjct: 271 AGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFW 330
Query: 110 IGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVL 155
I +HPD+G DP AL +I+ I++ ++V+ N + G I L
Sbjct: 331 ISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQL 390
Query: 156 APSVK---WQSQFVSGFNSQVFPLPCPQLQNK 184
+ + K W V G +S V P PC K
Sbjct: 391 SQTPKKPQWNCSNVEGVSSHVTPTPCSLFPEK 422
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI +G+D + +K G N G + P+S IT+ + + GV IGSE
Sbjct: 241 DSSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSE 299
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIG------ 111
MSG + + R K + RGG +E++ I M R+ P I
Sbjct: 300 MSGDVRDVTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMP 359
Query: 112 RGSNSHP-DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
S+S P DEG P +R +SF N+ + A AG+
Sbjct: 360 LDSDSEPVDEG-----TPMVRNVSFTNITARQVETAGFFAGL 396
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI +G+D + +K G N G + P+S IT+ + + GV IGSE
Sbjct: 216 DSSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSE 274
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIG------ 111
MSG + + R K + RGG +E++ I M R+ P I
Sbjct: 275 MSGDVRDVTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMP 334
Query: 112 RGSNSHP-DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
S+S P DEG P +R +SF N+ + A AG+
Sbjct: 335 LDSDSEPVDEG-----TPMVRNVSFTNITARQVETAGFFAGL 371
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 20/143 (13%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S V IED Y ++G+D +A+K G N G A PS NI +R + + G+ IGSE+S
Sbjct: 236 SNYVLIEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRN-NIFADGHGGITIGSEVS 294
Query: 74 GGI---------FNA-------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
GG+ FN+ R K + RGG IENI +R ++ V + +
Sbjct: 295 GGVNNVFADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAV---VHATML 351
Query: 118 PDEGRDPKALPKIRGISFVNVVS 140
+EGR +P+ R I+ N+ S
Sbjct: 352 YEEGRHGDYMPQFRNITIENLKS 374
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 24/150 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
++ IE+CY ++G+D +A+K G N G +A PS NI +R + GV IGSE+SG
Sbjct: 276 HMLIENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQ-MKAGHGGVVIGSEISGD 334
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+FN R K + RGG +ENI +R I++ +V + I + + +
Sbjct: 335 VFNVYAEGCAMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMI---CDFNYE 391
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
EG + P +R +S ++ +K VR
Sbjct: 392 EGINGPFTPVLRNVSMQSI----AVKKAVR 417
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE C ++G+D V +K G+N G +ARP+ N+ MR S + G+ +GSE
Sbjct: 257 DSCRNVLIEHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSAR-GHGGLVVGSE 315
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENI---TIRYIKMERVKIPIRIGRGS 114
MSG + N R K +GRGG +ENI +R M++ + + + G+
Sbjct: 316 MSGDVRNVYMHDCDFAGTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGA 375
Query: 115 N 115
+
Sbjct: 376 D 376
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI +G+D + +K G N G + P+S IT+ + + GV IGSE
Sbjct: 217 DSSRYVRISDAYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSE 275
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSG + + R K + RGG +E++ I M R+ P I +
Sbjct: 276 MSGDVRDVAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTP 335
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P + P +R ++F N+ + N A AG+
Sbjct: 336 LDSEPEPVDEGTPMVRNVTFSNITARNVETAGFFAGL 372
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +++ I++C + G+D + +K G GI + RP+ NI + + + GV IGSE
Sbjct: 221 DSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCT-MKNGHGGVVIGSE 279
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI------G 111
+GGI N R K +GRGG IENI + + M+ + P+ + G
Sbjct: 280 TAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHCYMKNILCPLVVNCYYGPG 339
Query: 112 RGSNSHPDEGRDPKAL----PKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVS 167
+S P DP+ L PKI+ I ++++ + A A IV P ++ ++S
Sbjct: 340 GPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAA---AAFIVGLPEQPIKNLYIS 396
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDC ++G+D +A+K G + G PS NI +R ++GV IGSE++GG
Sbjct: 267 NVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTGG 325
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG +ENI IR I++ K I H D
Sbjct: 326 CRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVD 385
Query: 120 EGRDPKALPKIRGISFVNVVS 140
+G LP I N+ S
Sbjct: 386 DG---PYLPYFHNIHLENITS 403
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDC ++G+D +A+K G + G PS NI +R ++GV IGSE++GG
Sbjct: 267 NVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVTGG 325
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG +ENI IR I++ K I H D
Sbjct: 326 CRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVD 385
Query: 120 EGRDPKALPKIRGISFVNVVS 140
+G LP I N+ S
Sbjct: 386 DG---PYLPYFHNIHLENITS 403
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I ++ +++K GW+ YGI+ RP+S+I + RV + + + + GSE
Sbjct: 236 DSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSE 295
Query: 72 MSGGI 76
MSGGI
Sbjct: 296 MSGGI 300
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +N+CIED I ++ +++K GW+ YGI+ RP+S+I + RV + + + + GSE
Sbjct: 236 DSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSE 295
Query: 72 MSGGI 76
MSGGI
Sbjct: 296 MSGGI 300
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 41/179 (22%)
Query: 33 VKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNARTKIDKGRGGNIE 92
+K GW+ YGI+ R SS+IT+R VSG++P + G+ SE S GR N+
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHVSGSSP-FIGIAGVSETS------------GRVDNVN 47
Query: 93 NITIRYIKME---RVKIPIRIGRGSNSHPDEGRDPKALPKIRG---------------IS 134
++ I Y + K I+I HPD+ D ALP ++ +S
Sbjct: 48 DMGIEYKCVYIYGECKEGIQISGDVGDHPDDKCDLNALPIVKAGLIQGMKNSPFTDICLS 107
Query: 135 FVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNSQVFPLPCPQLQNKTRFSWVTSY 193
+N+ VN ++ PS K F G QV P PCP+L + S V+ Y
Sbjct: 108 DINLHEVNGTRS--------RTPSCKCSDVF--GVALQVSPWPCPELISHQLGSCVSYY 156
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDCY ++G+D +A+K G N G + PS NI +RR + + GV IGSE+SGG
Sbjct: 271 NVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NEMRDGHGGVTIGSEISGG 329
Query: 76 IFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ R K + RGG IE+I T++ +K E V I + G
Sbjct: 330 VRYVYAEDNIMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGD 389
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 17/105 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V IEDC ++G+D +A+K G N+ G + + NI +RR + + GV IGSE+SGG
Sbjct: 265 DVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCT-MKDGHGGVTIGSEVSGG 323
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERV 104
+ N R K + RGG IENI + +K+ RV
Sbjct: 324 VRNVFVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKIGRV 368
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE C +++G+D + +K G + PS NI +R + G+ IGSE
Sbjct: 232 DACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCE-IRSGHGGITIGSE 290
Query: 72 MSGGIFN--------------ARTKIDKGRGGN-----IENITIRYIKMERVKIPIRIGR 112
MS G+ N R K GRGG IENIT R I+ V++ G
Sbjct: 291 MSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGD 350
Query: 113 GSNSHPDEGRDPKALPKIRGISFVNV 138
PD ++ K +P + I NV
Sbjct: 351 TLEKPPDP-KNLKHVPAVENILIRNV 375
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 20/142 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
++ IEDC+ +G+D +A+K G N+ G + PS NI +R + + G+ IGSE+SGG
Sbjct: 297 DMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRN-NKFEDGHGGITIGSEISGG 355
Query: 76 I----------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ + R K + RGG +ENI ++ + + KI + ++ +
Sbjct: 356 VNDIFAHDNYFDSSELDYPIRFKTNAERGGKLENIYVKNSVVNKSKIAV---IHADFFYE 412
Query: 120 EGRDPKALPKIRGISFVNVVSV 141
EG + +P +R I+ N+ +V
Sbjct: 413 EGTNGNYMPILRNITLSNIKTV 434
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDCY ++G+D +A+K G N G + PS NI +RR + + GV IGSE+SGG
Sbjct: 271 NVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGGVTIGSEISGG 329
Query: 76 IFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ R K + RGG IE+I T++ +K E V I + G
Sbjct: 330 VRYVYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGD 389
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDCY ++G+D +A+K G N G + PS NI +RR + + GV IGSE+SGG
Sbjct: 271 NVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGGVTIGSEISGG 329
Query: 76 I----------------FNARTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ R K + RGG IE+I T++ +K E V I + G
Sbjct: 330 VRYIYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEEGD 389
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV IGSE
Sbjct: 211 DSSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSE 269
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P I +
Sbjct: 270 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTD 329
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P +A P +R + F ++ + A AG+
Sbjct: 330 IDSDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGL 366
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
+TN +E+C+ +G+D +A+K G + G + +P+ NI +R S SGV IGSE+S
Sbjct: 258 TTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRN-STFESLASGVCIGSEIS 316
Query: 74 GG---IFNARTKIDKG-----------RGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
GG +F KI K RGG +EN IR + M+ V IR S
Sbjct: 317 GGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAIRFDPDYKSESK 376
Query: 120 E 120
E
Sbjct: 377 E 377
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV I DC+I G+D + +K G + G + + N+T+ + + GV IGSEMSG
Sbjct: 242 TNVHISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCT-MLSGHGGVVIGSEMSG 300
Query: 75 GI---------FNA-----RTKIDKGRGGNIE-----NITIRYIKMERVKIPIRIGRGSN 115
GI F+ R K +GRGG +E NI ++ IK E + + + +G+
Sbjct: 301 GIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTT 360
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
P + P R I N+ + N KA GI
Sbjct: 361 VEP----VTEKTPIFRNIHMSNITASNVNKAGQILGI 393
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I DC+I G+D + +K G + + RP NIT+ + + GV IGSEMSG
Sbjct: 249 SNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCT-MLSGHGGVVIGSEMSG 307
Query: 75 G---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
G +F+ R K +GRGG +E+I + + M +K + S
Sbjct: 308 GVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMKM 367
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP--SVKWQSQFVSGFNSQVFPLPC 178
+ + P R I FV ++V + P++ + AP + ++ +V+ + C
Sbjct: 368 EKKSERTPVFRNI-FVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVNDAKEECLFRDC 426
Query: 179 PQL 181
L
Sbjct: 427 KDL 429
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IEDC+ +G+D +A+K G N G PS NI +R + GV +GSE+SGG
Sbjct: 279 VLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCE-MKNGHGGVVVGSEISGGC 337
Query: 77 FNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K + RGG IENI +R I + + K
Sbjct: 338 QNVYAHDCVMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCK 382
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDC ++G+D +A+K G + G P NI +R ++GV IGSE++GG
Sbjct: 235 NVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECR-MKDGHAGVAIGSEITGG 293
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGGN+ N+ +R I + K I H D
Sbjct: 294 CHNVWVENCRMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVD 353
Query: 120 EGRDPKALPKIRGISFVNVVS 140
EG LP I N+ S
Sbjct: 354 EG---PYLPLFENIHLENITS 371
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV IGSE
Sbjct: 211 DSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSE 269
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P I +
Sbjct: 270 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTD 329
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P +A P +R + F ++ + A AG+
Sbjct: 330 IDSDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGL 366
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + + + G+D + +K G G+ + +P++++ ++ + ++ G+ IGSE
Sbjct: 214 DSSTNVAVSNSLFDVGDDAITLKSGSGPDGLRVNKPTAHVNVKDCT-ILASHGGIAIGSE 272
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG 111
+GGI + R K +GRGG I+ IT+R+++M+ PI +G
Sbjct: 273 TAGGINDVNVEKCTFSGTQRGIRLKSRRGRGGTIKGITLRHLEMDHCWCPIVLG 326
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I DC+I G+D + +K G + + RP NIT+ + + GV IGSEMSG
Sbjct: 249 SNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCT-MLSGHGGVVIGSEMSG 307
Query: 75 G---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
G +F+ R K +GRGG +E+I + + M +K + S
Sbjct: 308 GVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMKM 367
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP--SVKWQSQFVSGFNSQVFPLPC 178
+ + P R I FV ++V + P++ + AP + ++ +V+ + C
Sbjct: 368 EKKSERTPVFRNI-FVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVNDAKEECLFRDC 426
Query: 179 PQL 181
L
Sbjct: 427 KDL 429
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 16/98 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D + +V +E G+D VA+K GW+ +G+A +PS NIT+R V+ T + +G+ IGSE
Sbjct: 199 DSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDVN-CTGSKAGIAIGSE 257
Query: 72 MSGGIFN---------------ARTKIDKGRGGNIENI 94
MSGG+ + A K RGG + N+
Sbjct: 258 MSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
++ IE+CY +G+D +A+K G N+ G + P+SNI +R + + G+ IGSE+SGG
Sbjct: 297 DMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRN-NEFKDGHGGITIGSEISGG 355
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG +ENI I+ + + K+ + ++ +
Sbjct: 356 VNNIFGHDNYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV---IHADFFYE 412
Query: 120 EGRDPKALPKIRGISFVNVVSVN 142
EG + P +R I+ N+ +V+
Sbjct: 413 EGTNGNHKPILRNIALSNIKTVD 435
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV IGSE
Sbjct: 204 DSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSE 262
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P I +
Sbjct: 263 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTD 322
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P +A P +R + F ++ + A AG+
Sbjct: 323 IDSDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGL 359
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
++NV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEMS 806
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG+ N K ++ RGG I NI + I +ER K
Sbjct: 807 GGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
++NV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 731 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEMS 789
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG+ N K ++ RGG I NI + I +ER K
Sbjct: 790 GGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 835
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
++NV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEMS 806
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG+ N K ++ RGG I NI + I +ER K
Sbjct: 807 GGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
++NV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEMS 806
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG+ N K ++ RGG I NI + I +ER K
Sbjct: 807 GGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
++NV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEMS 806
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG+ N K ++ RGG I NI + I +ER K
Sbjct: 807 GGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 852
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
++NV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 750 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEMS 808
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG+ N K ++ RGG I NI + I +ER K
Sbjct: 809 GGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSK 854
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 21/151 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ T+V IE+C ++G+D +A+K G N G + +P NI + + GV IGSE
Sbjct: 279 EACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQ-MRSGHGGVVIGSE 337
Query: 72 MSGGIFNARTK--------IDKG--------RGGNIENITIRYIKMERVKIPIRIGRGSN 115
+SGG+ N + +D+G RGG+++N+ R I++ +VK + I N
Sbjct: 338 ISGGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVI----N 393
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKA 146
+ +EG K P + I+ N+ + +A
Sbjct: 394 FYYEEGDVGKFTPVLEDINIENLYVEHATRA 424
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IEDCY +G+D +A+K G N G + P++N+ +R + + G+ +GSE+S
Sbjct: 283 SRNVLIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRH-NRFANGHGGITLGSEIS 341
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
GG+ + R K + RGG +EN+ ++ + + ++ + ++
Sbjct: 342 GGVHDVFATGNHFDSPNLDYPIRFKTNAMRGGTLENVYVKDSVVNKARLAV---VHADFF 398
Query: 118 PDEGRDPKALPKIRGISF 135
+EG + LP++ I+
Sbjct: 399 YEEGHAGENLPQLDNITL 416
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV IGSE
Sbjct: 211 DSSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSE 269
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P I +
Sbjct: 270 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTD 329
Query: 118 PDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D +P +A P +R + F ++ + A AG+
Sbjct: 330 IDSEPEPVTEATPNVRNVDFHHITAEEVESAAFLAGL 366
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V +++C ++ G+D V +K G GI + +P+ N+ + ++ G+ IGSE
Sbjct: 215 DSSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVKVSDCR-ILASHGGIAIGSE 273
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR----- 112
+ GI + R K + RGG IENI + +KM+ PI + +
Sbjct: 274 TAAGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSGLKMDLCWCPISLEQYFAPG 333
Query: 113 ----GSNSHPDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFV 166
+ DEG P + P IR IS N+ + N ++A A IV P ++ +
Sbjct: 334 VLPEEEATVLDEGPQPVDETTPHIRNISIKNIKATN-VRA--TAAFIVGLPEANIENVEI 390
Query: 167 SGFN 170
F+
Sbjct: 391 ENFD 394
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S+NV I +G+D A+K G + GIA+ARPS NI R + GV IGSEMS
Sbjct: 350 SSNVWILGTSFSTGDDCSAIKSGKDAEGIAIARPSENIYFRG-DVFNSGHGGVTIGSEMS 408
Query: 74 GGIFNA---------------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR 112
GG+ N R K+ RGG + NI +R + ++ + R
Sbjct: 409 GGVRNVFVEDSTIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINKISVITNYDR 468
Query: 113 GSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPS 158
S D+ LP+ F ++ + N K + II ++ S
Sbjct: 469 TS---VDDLDSQTPLPQTENFKFSHITAPNWDKPAGKDNIIDISGS 511
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE C +++G+D + +K G + P NI +R + G+ IGSE
Sbjct: 232 DACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCE-IRSGHGGITIGSE 290
Query: 72 MSGGIFN--------------ARTKIDKGRGGN-----IENITIRYIKMERVKIPIRIGR 112
MS G+ N R K GRGG IENIT R I+ V++ G
Sbjct: 291 MSAGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGD 350
Query: 113 GSNSHPDEGRDPKALPKIRGISFVNV 138
PD ++ K +P + I NV
Sbjct: 351 TLEKPPDP-KNLKHVPAVENILIRNV 375
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++ + +G+D +A+K G N+ G +PS NI +RR + G+ IGSE+SGG
Sbjct: 269 NVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCV-MEDGHGGIVIGSEISGG 327
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K + RGG IENI +R +K+ + K
Sbjct: 328 CMNVFAEDCTMDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCK 373
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NV I +CYI++G+D + +K G + G+ + RP+ N+++ S + V IGSE
Sbjct: 243 DSSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCS-VHHAHGAVTIGSE 301
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SG + N R K +GRGG +E++ ME V + I +N +
Sbjct: 302 TSGWVRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNI---TNYY 358
Query: 118 PDEGRDPKALPK 129
EG P P+
Sbjct: 359 LMEGEKPANDPE 370
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++C ++G+D +A+K G N G + P+ NI + + GV IGSE+SGG
Sbjct: 314 NVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCK-MREGHGGVVIGSEISGG 372
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG IEN IR I + V I I + +
Sbjct: 373 VRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVI----DFDYE 428
Query: 120 EGRDPKALPKIRGISFVNVVSVNT 143
EG K P +R I N+ N
Sbjct: 429 EGDAGKFTPTVRNIDIRNLHCENA 452
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV IGSE
Sbjct: 248 DSSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P I +
Sbjct: 307 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTD 366
Query: 118 PDEGRDPK----ALPKIRGISFVNVVSVNTIKAPVRAGI 152
D DPK A P +R + F ++ + A AG+
Sbjct: 367 ID--SDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGL 403
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV IGSE
Sbjct: 248 DSSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P I +
Sbjct: 307 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTD 366
Query: 118 PDEGRDPK----ALPKIRGISFVNVVSVNTIKAPVRAGI 152
D DPK A P +R + F ++ + A AG+
Sbjct: 367 ID--SDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGL 403
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV I+DCY +G+D +A+K G N G + PS NI ++ + GV IGSE+S
Sbjct: 280 SKNVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCK-MADGHGGVVIGSEIS 338
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
GG+ N R K RGG IE+I +R I + +I ++ R + +
Sbjct: 339 GGVRNVFAENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVG--QIAQQVVRVNMFY 396
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPV 148
D G +P +R I N+ N K V
Sbjct: 397 EDSG---AYVPTVRNIHVENMTVENGGKVGV 424
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TNV I DC + G+D +A+K G GI + RP+ N+T+R + + G+ IGSE
Sbjct: 218 DSCTNVQIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVRGCT-VRDAHGGMVIGSE 276
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+ GI + R K +GRGG I ++ +R + ME PI I
Sbjct: 277 TAAGIRHVLAENCRFPGTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAI 329
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 32/164 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGIGSEM 72
NV I DC+I G+D + +K G + G + P NIT+ +SG + GV IGSEM
Sbjct: 253 NVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSG----HGGVVIGSEM 308
Query: 73 SGG---------IFNA-----RTKIDKGRGGNIE-----NITIRYIKMERVKIPIRIGRG 113
SGG IF+ R K +GRGG +E NI +R IK E V + ++ G
Sbjct: 309 SGGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYS-G 367
Query: 114 SNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP 157
+ P R P R I ++ ++V +K PV+ + AP
Sbjct: 368 MPAEPKSER----TPLFRNIH-ISGMTVTDVKTPVKIVGLEEAP 406
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++C +G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 269 NVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGG 327
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG I+NI +R +K+ + K + + + P
Sbjct: 328 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPR 386
Query: 120 EGRDPKALPKIRGISFVNV 138
E P +R ++ NV
Sbjct: 387 EACYRGFQPTVRNVNMENV 405
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 16/140 (11%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE CY ++G+D +A+K G N+ G + PS NI +R + + GV IGSE+SGG
Sbjct: 270 NVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCT-MKDGHGGVVIGSEISGG 328
Query: 76 ---IFNARTKIDK---GRGGNIENITIRYIKMERVKI-PIRIGRGSNS--HPDEGRDPKA 126
+F K+D R I++ T+R +E V + I +G SN+ + DPK
Sbjct: 329 CRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAIVRMNMFYDPKE 388
Query: 127 L------PKIRGISFVNVVS 140
+ PK R I NV S
Sbjct: 389 IGPRDFPPKFRNIRVENVTS 408
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++C +G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 289 NVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGG 347
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG I+NI +R +K+ + K + + + P
Sbjct: 348 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPR 406
Query: 120 EGRDPKALPKIRGISFVNV 138
E P +R ++ NV
Sbjct: 407 EACYRGFQPTVRNVNMENV 425
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 35/166 (21%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITM---RRVSGTTPTYSGVGIGS 70
S +V I C I++G+D +AVK G G+A P+ N+T+ + + G GV IGS
Sbjct: 268 SRDVLIRRCTIDTGDDNIAVKGG----GVAN-EPTENVTVTDCKFLHG-----HGVSIGS 317
Query: 71 EMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI-----G 111
E G+ N R K D+ RGG +EN+ R I M+ V+ I I
Sbjct: 318 ETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFYDD 377
Query: 112 RGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP 157
+ + +HP+ K P +R I+F +V T + +AG +V P
Sbjct: 378 KKAAAHPELAPVTKQTPMVRNITFQKIVCHGTTR---KAGELVGLP 420
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G RPS NI +R + GV IGSE+SGG
Sbjct: 287 NVLIENCRFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCE-MKNGHGGVVIGSEISGG 345
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKM 101
N R K + RGG +EN+ +R IK+
Sbjct: 346 YRNLYVENCVMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKV 387
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV I +C+I G+D + +K G + G + + N+T+ + + GV IGSEMSG
Sbjct: 242 TNVHISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCT-MLSGHGGVVIGSEMSG 300
Query: 75 GI---------FNA-----RTKIDKGRGGNIE-----NITIRYIKMERVKIPIRIGRGSN 115
GI F+ R K +GRGG +E NI ++ IK E + + + +G+
Sbjct: 301 GIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQ 360
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
P + P R I N+ + N KA GI
Sbjct: 361 VEP----VTEKTPIFRNIHMSNITASNVNKAGQILGI 393
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++C +G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 259 NVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGG 317
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG I+NI +R +K+ + K + + + P
Sbjct: 318 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPR 376
Query: 120 EGRDPKALPKIRGISFVNV 138
E P +R ++ NV
Sbjct: 377 EACYRGFQPTVRNVNMENV 395
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 86 GRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIK 145
GRGG ++++ +R + M +K + SHPDE DPKALP I+ I++ ++V+ N
Sbjct: 6 GRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTM 65
Query: 146 APVRAGI--------------IVLAPSVK---WQSQFVSGFNSQVFPLPCPQLQNK 184
AGI I L+ K W VSG+ S V P PC L K
Sbjct: 66 PAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEK 121
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I++C ++G+D +A+K G N G + PS NI + + GV IGSE+SGG
Sbjct: 276 HVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCH-MKEGHGGVVIGSEISGG 334
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG IE+I IR + + VK + I N + +
Sbjct: 335 VNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVI----NFYYE 390
Query: 120 EGRDPKALPKIRGISFVNVVSVNTI 144
EG + P +R I N+ N +
Sbjct: 391 EGDAGQFDPTVRDIQIENLHCKNVL 415
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 25/150 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IE+C ++G+D +A+K G N+ G +A P N+ ++ + GV +GSE+SGG
Sbjct: 291 VLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGA 349
Query: 77 FN----------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
N R K + RGG IEN+ IR I++ V+ I I N +E
Sbjct: 350 RNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVI----NFFYEE 405
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
G +P+++ + N+ T++ RA
Sbjct: 406 GDAGNFMPQVKNLHISNL----TVQKAQRA 431
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V I+ C I SG+D +++K G +ARP+ ++ + + ++ +GIGSE
Sbjct: 229 DSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTLEGRGFACIGIGSE 288
Query: 72 MSGGI---------------FNARTKIDKGRGGNIENITIRYIKMERVKIP-IRIGRGSN 115
S GI F K GRG IE++T+R + ++++ ++I + S
Sbjct: 289 TSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSAAKMRMGFLKISQTSA 348
Query: 116 SHPDEGRDP--KALPKIRGISFVNV 138
DE P LP R ISF+ +
Sbjct: 349 GVQDENPVPGLDGLPLFRNISFLRI 373
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 20/142 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
++ IE+CY +G+D +A+K G N+ G + P+ N+ + R + + G+ IGSE+SGG
Sbjct: 300 DMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVII-RYNEFKDGHGGITIGSEISGG 358
Query: 76 I----------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ + R K + RGG +ENI ++ + + KI + ++ +
Sbjct: 359 VNDIFAHDNYFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAV---IHADFFYE 415
Query: 120 EGRDPKALPKIRGISFVNVVSV 141
EG + P +R I+ N+ +V
Sbjct: 416 EGTNGDHKPILRNITLENIKTV 437
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IED + +G+D VA+K G +H G A PS NI +R V +GSE
Sbjct: 242 EMSRNVLIEDVHFNNGDDNVAIKSGRDHDGRGTACPSENIIIRNCH--FKGLHAVVLGSE 299
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
MS GI N K + RGG I NI+ + + + V+ I ++
Sbjct: 300 MSAGIQNVYVENCDYAGYCKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYI---TSM 356
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVL 155
+ EG+D I I+ N+ RAG +VL
Sbjct: 357 YGGEGQDNTFFTDIENITVENIQC-----RKARAGGLVL 390
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V IEDCY ++G+D +A+K G N G + PS NI +RR + + GV IGSE+SGG
Sbjct: 271 HVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NTMRDGHGGVTIGSEISGG 329
Query: 76 IFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ R K + RGG IE+I ++ +K E V I + G
Sbjct: 330 VKYVYAEDNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEEGD 389
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
+TNV IE+C +G+D +A+K G + G + RPS NI +R + +G+ IGSEMS
Sbjct: 253 TTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSEC-NGLCIGSEMS 311
Query: 74 GGIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
GG + K ++ RGG I N+ + I +ER K
Sbjct: 312 GGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVERAK 357
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCT-MLSGHGGVVIGSEMSGG 312
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
IF+ R K +GRGG +E+I + I M +K I + + P E
Sbjct: 313 VKKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMPAE 372
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPV 148
+ + P+ R I +V+ V+V + P+
Sbjct: 373 PKSDRT-PEFRNI-YVSGVTVRDVNTPI 398
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDC +++G+D + +K G + G A RP+ N+ +RR+ T + G+ +GSE+S G
Sbjct: 228 NVLIEDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIR-TRRGHGGIVLGSELSSG 286
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
I N R K GRGG +ENI +R I+M +
Sbjct: 287 IRNVLVEDCDFSGTERGIRIKSAPGRGGFVENIHMRNIRMSDI 329
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V + D +I++G+D + +K G + G + RP+ N+ + + + GV +GSE
Sbjct: 234 DSSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVVGSE 292
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+G + + R K +GRGG +E++ I M RV P + +
Sbjct: 293 TAGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTD 352
Query: 118 PDEGRDPK----ALPKIRGISFVNVVSVNTIKAPVRAGI 152
D DPK A P +R ++F ++ + A AG+
Sbjct: 353 IDS--DPKPVDEATPNVRNVNFHHITAEEVESAAFLAGL 389
>gi|326501180|dbj|BAJ98821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 132
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 64 SGVGIGSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIR 109
+G+ IGSEMSGG+ N R K GRGG I NI+ I + V+ I
Sbjct: 11 AGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIV 70
Query: 110 IGRGSNSHPDEGRDPKALPKIRGISF 135
I N H D+G D A P I GISF
Sbjct: 71 IKVDYNEHADDGYDRNAFPDITGISF 96
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 17/108 (15%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V IE+C ++G+D +A+K G N+ G + PS NI +R + GV IGSE+S
Sbjct: 276 SKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCK-MKDGHGGVVIGSEIS 334
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
GG+ N R K + RGG IEN+ +R +++ VK
Sbjct: 335 GGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVK 382
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV I +C ++G+D +A+K G N G + P SNI + + GV IGSE+SG
Sbjct: 293 TNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSEISG 351
Query: 75 GIFNARTK--------IDKG--------RGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
G+ N + +D+G RGG+++N+ R I + VK + + N
Sbjct: 352 GVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVV----NFFY 407
Query: 119 DEGRDPKALPKIRGISF--VNVVSVN 142
+EG K P + I+ +NV S N
Sbjct: 408 EEGDAGKFPPLLEDITIENLNVASAN 433
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 25/142 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + G MA P+ N + + + GV IGSEMSG
Sbjct: 247 NVHISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCT-MLSGHGGVVIGSEMSGD 305
Query: 76 ---------IFNA-----RTKIDKGRGGNIE-----NITIRYIKMERVKIPIRIGRGSNS 116
+F+ R K +GRGG +E NI ++ IK + + + ++ + +N
Sbjct: 306 VRKITISNCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQYAK-TNV 364
Query: 117 HPDEGRDPKALPKIRGISFVNV 138
P R PK R I F N+
Sbjct: 365 QPVSDR----TPKFRNIHFSNI 382
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I++C ++G+D +A+K G N+ G RPS NI +R + GV IGSE+SG
Sbjct: 269 SNVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCK-MKDGHGGVVIGSEISG 327
Query: 75 GIFNA----------------RTKIDKGRGGNIENITIRYI 99
G N R K + RGG IENI +R +
Sbjct: 328 GCRNVFAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNV 368
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ IE C + G+D V +K G G+ + P+ +T+ ++ G+ IGSE
Sbjct: 237 DSSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCK-ILASHGGIAIGSE 295
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR 112
+GGI + R K +GRGG I+NIT+ + M PI IG+
Sbjct: 296 TAGGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQ 350
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 25/150 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IE+C ++G+D +A+K G N+ G +A P N+ ++ + GV +GSE+SGG
Sbjct: 291 VLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGA 349
Query: 77 FN----------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
N R K + RGG IEN+ IR I++ V+ I I N +E
Sbjct: 350 RNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVI----NFFYEE 405
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
G +P++ + N+ T++ RA
Sbjct: 406 GDAGNFMPQVNNLHISNL----TVQKAQRA 431
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCT-MLSGHGGVVIGSEMSGG 312
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K I + + P E
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAE 372
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPV 148
+ + P+ R I +V+ V+V + P+
Sbjct: 373 PKSDRT-PEFRNI-YVSGVTVRDVNTPI 398
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 25/150 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IE+C ++G+D +A+K G N+ G +A P N+ ++ + GV +GSE+SGG
Sbjct: 291 VLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGA 349
Query: 77 FN----------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
N R K + RGG IEN+ IR I++ V+ I I N +E
Sbjct: 350 RNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVI----NFFYEE 405
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
G +P++ + N+ T++ RA
Sbjct: 406 GDAGNFMPQVNNLHISNL----TVQKAQRA 431
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
+ +E+ + +G+D +A+K G + G + RPS NI +R + GVG+GSEMSGGI
Sbjct: 270 ILVENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVR--NNLFDGEDGVGLGSEMSGGI 327
Query: 77 FNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K + RGG++E++ IR +K+ K
Sbjct: 328 KNVYFTDNDYLKGTSAFRLKANLDRGGSVEHVRIRNMKIGSAK 370
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCT-MLSGHGGVVIGSEMSGG 312
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K I + + P E
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAE 372
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPV 148
+ + P+ R I +V+ V+V + P+
Sbjct: 373 PKSDRT-PEFRNI-YVSGVTVRDVNTPI 398
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 10 YTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIG 69
Y D S NV I DCYI++G+D + +K G + G + RP+ NI++ + + V +G
Sbjct: 228 YVDSSRNVRISDCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCN-VHRAHGAVVLG 286
Query: 70 SEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SE+SG I N R K +GRGG IE++ M+ V I I
Sbjct: 287 SEISGWIRNLVASNITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINI 341
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCT-MLSGHGGVVIGSEMSGG 312
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K I + + P E
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAE 372
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPV 148
+ + P+ R I +V+ V+V + P+
Sbjct: 373 PKSDRT-PEFRNI-YVSGVTVRDVNTPI 398
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV I +C ++G+D +A+K G N G + P SNI + + GV IGSE+SG
Sbjct: 293 TNVIISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCE-MKAGHGGVVIGSEISG 351
Query: 75 GIFNARTK--------IDKG--------RGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
G+ N + +D+G RGG+++N+ R I + VK + +
Sbjct: 352 GVENLYAQYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFY-EEG 410
Query: 119 DEGRDPKALPKIRGISFVNVVSVN 142
D G P L I I +NVVS N
Sbjct: 411 DAGNFPPLLEDIT-IENLNVVSAN 433
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C+I G+D + +K G + G ARP+ N T+ + + + GV IGSEMSG
Sbjct: 238 SNVHISNCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLS-GHGGVVIGSEMSG 296
Query: 75 G---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
IF+ R K +GRGG +E+I + I M+ +K
Sbjct: 297 DVKKIVISNCIFDGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIK 341
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCT-MLSGHGGVVIGSEMSGG 312
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K I + + P E
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAE 372
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPV 148
+ + P+ R I +V+ V+V + P+
Sbjct: 373 PKSDRT-PEFRNI-YVSGVTVRDVNTPI 398
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCT-MLSGHGGVVIGSEMSGG 312
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K I + + P E
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMPAE 372
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPV 148
+ + P+ R I +V+ V+V + P+
Sbjct: 373 PKSDRT-PEFRNI-YVSGVTVRDVNTPI 398
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 76 IFNARTKI----DKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIR 131
IF++R+ I GRGG + N+ I + + + I IR HPDE DP ALP I
Sbjct: 15 IFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEHPDEAYDPDALPLIE 74
Query: 132 GISFVNVVSVNTIKAPVRAGI--------------IVLAPSVKWQSQFVSGFNSQVFPLP 177
I+ +V+ N +A + GI + ++ V W V G++ V P
Sbjct: 75 RITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLNVSSKVPWNCSDVKGYSDLVSPEV 134
Query: 178 CPQLQNK 184
C L+ +
Sbjct: 135 CEPLKER 141
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IEDC++ G+D + +K G GI A+P+ N+ +R + + G+ IGSE
Sbjct: 220 DSCENVVIEDCFVSVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCT-VRNAHGGIVIGSE 278
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+ G+ + R K +GRGG+I +I +R + M PI +
Sbjct: 279 TAAGMSHIHAVGCDLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNNTLCPIAM 331
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 80 RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
R K GRGG ++NI R M+ +K + HP G DPKALP+I I++ ++
Sbjct: 966 RIKTAVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGGFDPKALPEISNINYRDMT 1025
Query: 140 SVNTIKAPVRAGI--------------IVLAPS---VKWQSQFVSGFNSQVFPLPCPQLQ 182
+ N + GI I L+P ++W VSG S+V P PC L
Sbjct: 1026 AENVTISAKLEGIKNDPFTGLCMSNVTIALSPDPKKLQWNCTDVSGVTSRVKPEPCSLLP 1085
Query: 183 NK 184
+K
Sbjct: 1086 DK 1087
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D N+ + + + G+D +A+K G + G + PSSNIT+R S + GV +GSE
Sbjct: 378 DSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRN-SLMLHGHGGVTLGSE 436
Query: 72 MSGGIFNARTKID--------------KGRGGNIENITIRYIKMERVK---IPIRIGRGS 114
MSGGI N K D +GRGG I+++ I M+ + I S
Sbjct: 437 MSGGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSS 496
Query: 115 NSH--PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
N P G + P I+ + F N+ ++ +A G+
Sbjct: 497 NGAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGL 536
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV I +C+I G+D + +K G + G + + N+T+ + + GV IGSEMSG
Sbjct: 244 TNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCT-MLSGHGGVVIGSEMSG 302
Query: 75 GI---------FNA-----RTKIDKGRGGNIE-----NITIRYIKMERVKIPIRIGRGSN 115
GI F+ R K +GRGG +E NI ++ IK E + + + + +
Sbjct: 303 GIKKITISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNIVMKNIKEEAIILDLFYDKDNP 362
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVL 155
P R P R I NV N KA GI+ +
Sbjct: 363 VEPVTER----TPIFRNIHISNVTGGNVNKAGFVRGIVEM 398
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IEDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 264 EMSRNFLIEDCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCD-IIKGHTLLGIGSE 322
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGGI N K + RGG IENI + + KM+RV
Sbjct: 323 MSGGIRNVYMHDCAAPDSVFRLFFAKTNHRRGGFIENIHMENVKAGKMQRV 373
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE+C ++G+D +A+K G N G PS NI +R + GV +GSE+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKM 101
GG N R K + RGG IENI +R I++
Sbjct: 329 GGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC I+ G+D +A+K G A+ P NIT+ + + GV GSEMSG
Sbjct: 196 NVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCT-MLHGHGGVVFGSEMSGD 252
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG IENI + I M V P I H G
Sbjct: 253 IRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVICPF-ILNLYYYHGPRG 311
Query: 122 RDP----------KAL-PKIRGISFVNVVSVNTIKA 146
+P AL PK R I F N+ + + A
Sbjct: 312 MEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAA 347
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE+C ++G+D +A+K G N G PS NI +R + GV +GSE+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKM 101
GG N R K + RGG IENI +R I++
Sbjct: 329 GGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE+C ++G+D +A+K G N G PS NI +R + GV +GSE+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKM 101
GG N R K + RGG IENI +R I++
Sbjct: 329 GGYKNLFVENCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEV 372
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV I +C ++G+D +A+K G N G + P SNI + + GV IGSE+SG
Sbjct: 293 TNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSEISG 351
Query: 75 GIFNARTK--------IDKG--------RGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
G+ N + +D+G RGG+++N+ R I + VK + +
Sbjct: 352 GVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFY-EEG 410
Query: 119 DEGRDPKALPKIRGISFVNVVSVN 142
D G P L I I +NV S N
Sbjct: 411 DAGNFPPLLEDIT-IENLNVASAN 433
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C I+ +D + +K G + G+ + RP+ N+ +R + T G G+
Sbjct: 255 DSSTNILIENCMIDCNDDNICLKSGRDTDGLRVNRPTENVVIRNCT----TRKGAGLITC 310
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GSE SGGI N R K RGG IENI I +K + V+
Sbjct: 311 GSETSGGIRNILGHDLTAQGTWSVLRLKSAMNRGGIIENIYITRVKADSVR 361
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN-------- 78
G+D +A+K G + G + +PS N ++ S + GV IGSEMSGG+ N
Sbjct: 291 GDDCIAIKSGKLYLGKVLNKPSKNFIIKNCS-MKYGHGGVVIGSEMSGGVENINIEKCDF 349
Query: 79 ------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPDEGRD------- 123
R K +GRG N I+ I ++ I M+ VK+P PD +
Sbjct: 350 YKTDKGIRIKTRRGRGENGVIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEK 409
Query: 124 ---PKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP-----SVKWQSQFVSGFNSQVFP 175
+ P I+ ISF N+ + +T+ V AG + P +VK+++ V + +V P
Sbjct: 410 LPVDERTPSIKNISFENIKAEDTL---VCAGFLYGLPEKPIENVKFKNVEVDFKDGEVTP 466
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCE-MKNGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK---IPIRIGRGSNS 116
N R K RGG IEN+ +R IK+ + + I +
Sbjct: 331 YRNLYVEDCVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVGQCNEAVLRINLKYEERE 390
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLA 156
+ G D P +R + NV + R GI+ +
Sbjct: 391 QCNRGFD----PTVRNVHLKNVTCEKS-----RYGIVAIG 421
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+DCY ++G+D +A+K G N G PS NI + + GV IGSE+SGG
Sbjct: 281 NVLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCE-MKEGHGGVVIGSEISGG 339
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K RGG +ENI +R + + + R + + +
Sbjct: 340 ARNVFAQNLVMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREAAV--RFNMFYEE 397
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQ 162
EG +P IR + N+ N K V A +P +Q
Sbjct: 398 EG---DHIPTIRNVIVENLQVKNGGKYAVMANAYESSPVTNFQ 437
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 33/154 (21%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPT--YSGVGIGSEMS 73
NV I DC+I+ G+D +A+K G +A + N+T ++G T + GV IGSEMS
Sbjct: 190 NVRISDCHIDVGDDCIALKAGTERTPDRVA--TENVT---ITGCTMVRGHGGVVIGSEMS 244
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
GG+ N R K + RGG +EN+ + I M+ V P+ + PD
Sbjct: 245 GGVRNVVISNCVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGPD 304
Query: 120 EGRDPK-----------ALPKIRGISFVNVVSVN 142
G++P P +R + ++ + N
Sbjct: 305 -GKEPHVGDRTARPVDAGTPHLRSLHLSHLTATN 337
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IED ++G+D VA+K G ++ G A PS NI +RR V IGSEMS
Sbjct: 266 SRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMS 323
Query: 74 GGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
GG+ N K + RGG ++NI ++ + + V+ I + ++ +
Sbjct: 324 GGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYA 380
Query: 119 DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVK 160
EG + ++ + V+ VS +A AGI++ K
Sbjct: 381 GEGLGSRHFSEVEHL-LVDGVSCRKARA---AGIVLQGTKAK 418
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++ + +G+D +A+K G N+ G +PS NI +R + G+ IGSE+SGG
Sbjct: 271 NVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISGG 329
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG IENI +R +K+ + K + + + P+
Sbjct: 330 CKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPE 388
Query: 120 EGRDPKALPKIRGISFVNV 138
E P++R ++ +V
Sbjct: 389 EPCYRGFEPEVRDVNIEDV 407
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R + ++ +GIGSE
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCN-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R + ++ +GIGSE
Sbjct: 223 EMSRNFLIENCVFDQGDDAVVIKAGRNQNAWRLNTPCENIVIRHCN-ILKGHTLLGIGSE 281
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 282 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 332
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG- 75
V IE+C ++G+D +A+K G N G +A P + ++ + + GV IGSE+SGG
Sbjct: 283 VLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKS-GHGGVVIGSEISGGA 341
Query: 76 --IFNARTK-----IDKG--------RGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
IF R + +++G RGG IE I + I++ VK I I N + +E
Sbjct: 342 KQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVI----NFYYEE 397
Query: 121 GRDPKALPKIRGISFVN 137
G LP+++ + N
Sbjct: 398 GDAGNFLPEVKDLKISN 414
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I CY ++G+D +A+K G N G +ARP+ N + + GV IGSE+SGG
Sbjct: 277 NVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCE-MKDGHGGVVIGSEISGG 335
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K RGG IEN+ +R +++ K + P
Sbjct: 336 ARNIFAQNLIMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYEKPG 395
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLA 156
+ LP IR IS N+ IK + G+++ A
Sbjct: 396 D-----FLPTIRNISVENL----NIKQGGKFGVLINA 423
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE+C ++G+D +A+K G N G PS NI +R + GV +GSE+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKM 101
GG N R K + RGG IENI +R +++
Sbjct: 329 GGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE+C ++G+D +A+K G N G PS NI +R + GV +GSE+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKM 101
GG N R K + RGG IENI +R +++
Sbjct: 329 GGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R + ++ +GIGSE
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVVRHCN-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI---KMERV 104
MSGG+ N K + RGG IENI ++ + KM+RV
Sbjct: 320 MSGGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRV 370
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I DC+I G+D + +K G + G + RP+ N T+ + + GV IGSEMSG
Sbjct: 240 SNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCT-MLRGHGGVVIGSEMSG 298
Query: 75 G---------IFNA-----RTKIDKGRGGNIENITIRYIKMERV 104
G IF+ R K +GRGG +E+I + I M+ +
Sbjct: 299 GVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNI 342
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++ + +G+D +A+K G N+ G +PS NI +R + G+ IGSE+SGG
Sbjct: 269 NVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISGG 327
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG IENI +R +K+ + K + + + P+
Sbjct: 328 CKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPE 386
Query: 120 EGRDPKALPKIRGISFVNV 138
E P++R ++ +V
Sbjct: 387 EPCYRGFEPEVRDVNVEDV 405
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NV IE+C IE +D + +K G + G+ + RPS NI +R S + +GV IGSE
Sbjct: 206 DSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSENIVVRNCS--IGSGAGVTIGSE 263
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
SG I N R K RGG IENI + +M V P
Sbjct: 264 TSGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENIRVHDFEMVNVLRP 313
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE+C ++G+D +A+K G N G PS NI +R + GV +GSE+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKM 101
GG N R K + RGG IENI +R +++
Sbjct: 329 GGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++C +G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 273 NVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCR-MEDGHGGVVIGSEISGG 331
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG I+NI +R + + + K + + + P
Sbjct: 332 CENVYAENCEMDSPHLERILRIKTNNCRGGLIQNIHMRKVTVGQCKEAV-LKINLDYEPR 390
Query: 120 EGRDPKALPKIRGISFVNV 138
E P +R +S +V
Sbjct: 391 EACYRGFEPTVRNVSMEDV 409
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I++C ++G+D +A+K G N G + S NI + + GV IGSE+SGG
Sbjct: 292 HVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEISGG 350
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG IE+I IR I++ VK I I N + +
Sbjct: 351 VNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVI----NFYYE 406
Query: 120 EGRDPKALPKIRGISFVNVVSVNTI 144
EG + P +R I N+ N +
Sbjct: 407 EGDAGQFDPIVRDIKIDNLHCKNVL 431
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 21/107 (19%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGIGSE 71
+NV I DC+I G+D + +K G + G +P N+T+ +SG + GV IGSE
Sbjct: 253 SNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSG----HGGVVIGSE 308
Query: 72 MSGG---------IFNA-----RTKIDKGRGGNIENITIRYIKMERV 104
MSGG +F+ R K +GRGG +E+I + I M+ +
Sbjct: 309 MSGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDNIVMKNI 355
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I++C ++G+D +A+K G N G + S NI + + GV IGSE+SGG
Sbjct: 292 HVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEISGG 350
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG IE+I IR I++ VK I I N + +
Sbjct: 351 VNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVI----NFYYE 406
Query: 120 EGRDPKALPKIRGISFVNVVSVNTI 144
EG + P +R I N+ N +
Sbjct: 407 EGDAGQFDPIVRDIKIDNLHCKNVL 431
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IED ++G+D VA+K G ++ G A PS NI +RR V IGSEMS
Sbjct: 254 SRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMS 311
Query: 74 GGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
GG+ N K + RGG ++NI ++ + + V+ I + ++ +
Sbjct: 312 GGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYA 368
Query: 119 DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVK 160
EG + ++ + V+ VS +A AGI++ K
Sbjct: 369 GEGLGSRHFSEVEHL-LVDGVSCRRARA---AGIVLQGTKAK 406
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IED ++G+D VA+K G ++ G A PS NI +RR V IGSEMS
Sbjct: 254 SRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMS 311
Query: 74 GGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
GG+ N K + RGG ++NI ++ + + V+ I + ++ +
Sbjct: 312 GGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYA 368
Query: 119 DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVK 160
EG + ++ + V+ VS +A AGI++ K
Sbjct: 369 GEGLGSRHFSEVEHL-LVDGVSCRRARA---AGIVLQGTKAK 406
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IEDC ++G+D +A+K G N G + P ++ ++ + GV IGSE+SGG+
Sbjct: 286 VVIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCH-MKEGHGGVVIGSEISGGV 344
Query: 77 FNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
N R K + RGG IE++ I + VK I N + +E
Sbjct: 345 ANVHVRHCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVFVI----NFYYEE 400
Query: 121 GRDPKALPKIRGISFVNV 138
G K +P +R I ++
Sbjct: 401 GDRGKWMPLVRDIEITDL 418
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S N+ I +C +G+D +A+K G + G +A PS NI ++ + GV IGSE
Sbjct: 290 EYSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSE 348
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK-IPIRIGRGS 114
+S G+ N R K + RGG IENI +R +++ VK +++
Sbjct: 349 ISAGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFY 408
Query: 115 NSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
N + + + +P IR +S NV N K V A
Sbjct: 409 NVYGSQTGN--FIPTIRNVSLENVTVKNGGKYSVWA 442
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R + G G+
Sbjct: 253 DSSTNILVENCEVDCNDDNICIKAGRDADGLRVNRPTENVVIRNCTAR----KGAGLVTC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE SG I N R K RGG +ENI + +K + VK + +G
Sbjct: 309 GSETSGSIRNVLAYDLKAYGTGAALRLKSSMNRGGTVENIYMTRVKADSVKYVLAVGLNW 368
Query: 115 N 115
N
Sbjct: 369 N 369
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 80 RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
R K GRGG I++I R M+ +K + HP G DPKALP+I I + ++
Sbjct: 965 RIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGGFDPKALPEISNIHYRDMT 1024
Query: 140 SVN-TIKAPVR-------------AGIIVLAPS---VKWQSQFVSGFNSQVFPLPCPQLQ 182
+ N TI A + + I L+P ++W VSG S+V P PC L
Sbjct: 1025 AENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCTDVSGVTSRVTPEPCSLLP 1084
Query: 183 NK 184
+K
Sbjct: 1085 DK 1086
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKG--WNHYGIAMARPSSNITMRRVSGTTPTYSGVGIG 69
D NV I +CYI G+D VA+K G ++ Y I P NIT+ + + GV IG
Sbjct: 190 DSCRNVRITNCYISVGDDCVAIKSGVEYSKYRI----PCENITITNCT-MLDGHGGVVIG 244
Query: 70 SEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPI 108
SEMSG + N R K +GRGG +E+I + I M++V P+
Sbjct: 245 SEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCPL 297
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +NV + +C+ + G+D +A K G N G +ARP+ N+ + + + G+ +GSE
Sbjct: 218 DSCSNVRVSNCHFDVGDDCLAFKSGINEDGRRVARPTENVAVTNCT-MKNGHGGIVMGSE 276
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI N R K ++ RG I +I I I M+ V P+ I
Sbjct: 277 NSGGIRNIAVSNCVFIGTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAI 329
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+ C+ ++G+D +AVK G N G + PS NI + + + GV IGSE+SGG
Sbjct: 241 NVVIKGCHFDNGDDCIAVKSGRNADGRRINMPSENIVIEH-NEMKDGHGGVTIGSEISGG 299
Query: 76 IFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ N R K + RGG +ENI T++ +K E + I + G
Sbjct: 300 VKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGD 359
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 18/122 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V IEDC E+G+D +A+ G N G + RP I ++ ++ V IGS
Sbjct: 201 DSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCR-FIGGHAAVAIGSG 259
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK---IPIRIGRGS 114
MSGGI + R K +GRGG ++ + + ++M+ ++ I + + GS
Sbjct: 260 MSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMNYGS 319
Query: 115 NS 116
++
Sbjct: 320 ST 321
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N ++DC + G+D + +K G + G P+ NIT+R S + G IGSEMSGG
Sbjct: 274 NGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRN-SRVYHAHGGFVIGSEMSGG 332
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
+ N R K +GRGG +ENI + I M +
Sbjct: 333 VKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDI 375
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I+D + G+D +A+K G + G + PS NI +R GV IGSEMSGG+ N
Sbjct: 350 IDDTF-SVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCHMLNG--HGVSIGSEMSGGVQN 406
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI------GRGSNSHP 118
R K +GRGG ++NIT ++ M ++ I GS P
Sbjct: 407 VLVENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNGSALPP 466
Query: 119 DEGRDPKALPKIRGISFVNVVSVNTIK 145
D A P IR ++F N ++VN K
Sbjct: 467 GPVTD--ATPAIRNLNFDN-ITVNGAK 490
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++ +G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 270 NVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCK-MEDGHGGVVIGSEISGG 328
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK---IPIRIGRGSNS 116
N R K + RGG I+NI +R +K+ + K + I + +N
Sbjct: 329 CENVYAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNE 388
Query: 117 HPDEGRDPKALPKIRGISFVNV 138
G + P +R ++ NV
Sbjct: 389 DCYRGFE----PTVRNVNMENV 406
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IE+C + G+D +AVK G N + P NI +R S + + IGSE
Sbjct: 259 EMSQNVLIENCVFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCS-VKNGHQLLAIGSE 317
Query: 72 MSGGIFNART-----------------KIDKGRGGNIENITIRYIKMERV 104
+SGG+ N K ++ RGG ++NI + IK R+
Sbjct: 318 LSGGVENVYMGNCEVAPNAKLNHLLFIKTNERRGGYVKNIYMEDIKAGRI 367
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITM---RRVSGTTPTYSGVGIGS 70
S NV I + ++G+D +A+K G N G + PS NI + R G + GV IGS
Sbjct: 281 SRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFDG----HGGVVIGS 336
Query: 71 EMSGGIFNA----------------RTKIDKGRGGNIENITIRYIKM-ERVKIPIRIGRG 113
EMSG + N R K + RGG +E + R + E IR+
Sbjct: 337 EMSGDVRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPEVADAVIRV--- 393
Query: 114 SNSHPDEGRDPKALPKIRGISFVNVVSV 141
N H +EG P +RG+ NV SV
Sbjct: 394 -NFHYEEGDTGDFTPTVRGLHIENVHSV 420
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IEDC ++G+D +A+K G + G PS NI +R ++GV IGSE++GG
Sbjct: 267 NVLIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGG 325
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYI 99
N R K + RGG +EN+ +R I
Sbjct: 326 CRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNI 365
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+ C+ ++G+D +AVK G N G + PS NI + + + GV IGSE+SGG
Sbjct: 241 NVVIKGCHFDNGDDCIAVKSGRNADGRRINIPSENIVIEH-NEMKDGHGGVTIGSEISGG 299
Query: 76 IFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ N R K + RGG +ENI T++ +K E + I + G
Sbjct: 300 VKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGD 359
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 21/124 (16%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV IE C +G+D +A+K G ++ + +P+ N+ +R + + +GV IGSE+SG
Sbjct: 267 SNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCTFWSKI-NGVCIGSEISG 325
Query: 75 GIFNART--------------KIDKGRGGNIENITIRYIKMERVKIP-IRI-----GRGS 114
G+ N K + RGG IENI +R I+ + V+ +R+ G S
Sbjct: 326 GVRNVFIENISILKSSNAIYFKSNLDRGGYIENIYVRNIQADSVRTALVRVEPNYKGERS 385
Query: 115 NSHP 118
HP
Sbjct: 386 GFHP 389
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K + + + P E
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAE 369
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVR 149
+ + P R + ++ ++V +K P++
Sbjct: 370 AKSERT-PIFRNVH-ISGMTVTDVKTPIK 396
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K + + + P E
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPAE 369
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVR 149
+ + P R + ++ ++V +K P++
Sbjct: 370 AKSERT-PIFRNVH-ISGMTVTDVKTPIK 396
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+ C+ +SG+D +AVK G N + PS NI + + + GV IGSE+SGG
Sbjct: 241 NVVIKGCHFDSGDDCIAVKSGRNADARRINMPSENIVIEH-NEMKDGHGGVTIGSEISGG 299
Query: 76 IFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGS 114
+ N R K + RGG +ENI T++ +K E + I + G
Sbjct: 300 VKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGD 359
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V +E C + +D + VK G + R + +I +R T SG+ +GSE
Sbjct: 203 DTSQLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDC--TLLKGSGITLGSE 260
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRG---S 114
SGGI N R K + RGG I+NI +R++KME V P +
Sbjct: 261 TSGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPFMLQLNWFPQ 320
Query: 115 NSHPDEGRDPKALPKIRGIS 134
S+ ++ D K P R ++
Sbjct: 321 YSYSEQPADTKQPPHWRKLA 340
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 77/191 (40%), Gaps = 32/191 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC I+ G+D +A+K G + P NIT+ + + GV GSEMSG
Sbjct: 195 NVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENITITNCT-MLHGHGGVVFGSEMSGD 251
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG IENI + I M + P I H G
Sbjct: 252 IRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIICPF-ILNLYYYHGPRG 310
Query: 122 RDP----------KAL-PKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFN 170
+P AL PK R I F N+ + + A AG + P + + S
Sbjct: 311 MEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAA---AGFMYGLPEMPVEDITFSHIR 367
Query: 171 SQVFPLPCPQL 181
+ P P L
Sbjct: 368 IAMKPDAEPDL 378
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 17/97 (17%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V I++C ++G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 270 VLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCK-MADGHGGVVIGSEISGGC 328
Query: 77 FNA----------------RTKIDKGRGGNIENITIR 97
N R K + RGG IENI +R
Sbjct: 329 RNVFAEDCYMDSPHLDRVLRIKTNNCRGGLIENINMR 365
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 21/139 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I++C ++G+D +A+K G N G + S NI + + GV IGSE+SGG
Sbjct: 285 DVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQ-MKAGHGGVVIGSEISGG 343
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG+++N+ R I + +VK I I N + +
Sbjct: 344 VRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVI----NFYYE 399
Query: 120 EGRDPKALPKIRGISFVNV 138
EG K P + I N+
Sbjct: 400 EGDVGKFTPVLEDIRIENL 418
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV I DC + G+D +A+K G N G + PS NI +R ++ + V IGSE
Sbjct: 263 EMSQNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLT-VKNGHQLVAIGSE 321
Query: 72 MSGGIFNA 79
+SGGI N
Sbjct: 322 LSGGIENV 329
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 18/115 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIA-MARPSSNITMRRVSGTTPTYSGVGIGS 70
+ + +V IE+ ++G+D VA+K G +H G A A PS NI +R + GV IGS
Sbjct: 251 EYAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCN--FKGLHGVVIGS 308
Query: 71 EMSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
EMS G+ N K + RGG I+NI +R I++++V+ + I
Sbjct: 309 EMSAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNIFVRNIQLDQVEDCLYI 363
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DYSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV I +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTY---SGVGIGS 70
ST + I+ YI++G+D VA+K G P ++ R ++ T + G+ IGS
Sbjct: 202 STKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDITITDCEFLHGHGLSIGS 255
Query: 71 EMSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
E++GG+ N R K ++ RG +I N R I ME VK I +
Sbjct: 256 EIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDITMENVKTAILLSEFYPK 315
Query: 117 HPD---EGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
PD E + P I+ NV +V + A V G+
Sbjct: 316 IPDTITEEPVTRLTPHFHDITIENVQAVGSRDAAVIVGL 354
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 28/151 (18%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI-- 76
+EDC + G+D + +K G + G A+ P +I +R + G IGSEMSGG+
Sbjct: 270 VEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCR-VYHGHGGFVIGSEMSGGVRR 328
Query: 77 ------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP-DEGRD 123
R K +GRGG +E+I I I+M + +G + H EG++
Sbjct: 329 LRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSI-----VGEAISFHLFYEGKE 383
Query: 124 PKALPKIRGISFVNVVSVNTIKAPVRAGIIV 154
G++ N+V V +++ P+ GI +
Sbjct: 384 GS------GVAGENIVPV-SVETPIFRGITI 407
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSG--TTPTYSGVGIG 69
D S +V +E + +G+D + +K G+N G+A+ P+ N+ +R GV G
Sbjct: 272 DSSHDVLLEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGSGGVVFG 331
Query: 70 SEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
SE SGGI N R K +GRG IENI +R I M+ +
Sbjct: 332 SETSGGIRNVYVHDAVFEKCDRGIRFKTARGRGNVIENIFVRDISMKDI 380
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 31/182 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N+ I +C I+ G+D +A+K G + + NIT+ + + V +GSEMSG
Sbjct: 195 NLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT-MVHGHGAVVLGSEMSGN 252
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP--- 118
I N R K +GRGG +ENIT+ I ME V P I P
Sbjct: 253 IRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGPKGK 312
Query: 119 -----DEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNS 171
D+ P K P R I F N+V+ K AG I P + Q VS N
Sbjct: 313 EKYVWDKNPYPITKETPCFRSIHFSNIVAK---KVRAAAGFIYGLPEMPVQD--VSFTNI 367
Query: 172 QV 173
Q+
Sbjct: 368 QI 369
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +E+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 264 EMSRNFLVENCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCD-IIKGHTLLGIGSE 322
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
MSGGI N K + RGG IENI + +K +++ + I
Sbjct: 323 MSGGIRNVYMHDCAAPDSVFRLFFAKTNHRRGGFIENIHMENVKAGKMQRILEI 376
>gi|314949481|ref|ZP_07852816.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430834090|ref|ZP_19452099.1| glycosyl hydrolase [Enterococcus faecium E0679]
gi|313644095|gb|EFS08675.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430485613|gb|ELA62513.1| glycosyl hydrolase [Enterococcus faecium E0679]
Length = 269
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 40 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 97
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 98 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 147
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IE+C + G+D +A+K G N G + PS NI +R + + V IGSE
Sbjct: 272 EMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCT-VKNGHQLVAIGSE 330
Query: 72 MSGGIFNA 79
+SGGI N
Sbjct: 331 LSGGIENV 338
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I G+D + +K G + G MA P+ N T+ + + + GV IGSEMSG
Sbjct: 259 NVHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLS-GHGGVVIGSEMSGD 317
Query: 76 ---------IFNA-----RTKIDKGRGGNIE-----NITIRYIKMERVKIPIRIGRGSNS 116
+F+ R K +GRGG +E NI ++ IK + + + ++ + +
Sbjct: 318 VRKISISNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVLDLQYAK-TTL 376
Query: 117 HPDEGRDPKALPKIRGISFVNV 138
P R P+ R I F N+
Sbjct: 377 EPVSER----TPRFRNIHFSNI 394
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V +E C + +D + VK G + R + +I +R T SG+ +GSE
Sbjct: 203 DSSQLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDC--TLLKGSGITLGSE 260
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRG---S 114
SGGI N R K + RGG I+NI +R++KME V P +
Sbjct: 261 TSGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPFMLQLNWFPQ 320
Query: 115 NSHPDEGRDPKALPKIRGIS 134
S+ ++ D K P R ++
Sbjct: 321 YSYSEQPADTKQPPHWRKLA 340
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 21/107 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGIGSEM 72
NV I DC+I G+D + +K G + G + NIT+ +SG + GV IGSEM
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSG----HGGVVIGSEM 306
Query: 73 SGG---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
SGG +F+ R K +GRGG +E+I + I M+ ++
Sbjct: 307 SGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ 353
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
IF+ R K +GRGG +E+I + I M +K
Sbjct: 310 VRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIK 353
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE C I+ G+D +A+K G GI RP+ ++ + + + + G IGSE
Sbjct: 218 DSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCT-VRNAHGGAVIGSE 276
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+ GI N R K +GRGG I +++ +KM + P+ I
Sbjct: 277 TAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCPLTI 329
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S N+ I++C +G+D +A+K G + G +A PS NI ++ + GV IGSE
Sbjct: 277 EYSQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSE 335
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK-IPIRIGRGS 114
+S G+ N R K + RGG IE++ +R +++ VK +++
Sbjct: 336 ISAGVNNVFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFY 395
Query: 115 NSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
N + + +P IR IS NV T+K + G+
Sbjct: 396 NVYGSQ--TGSFIPVIRNISLENV----TVKKAGKYGV 427
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 21/107 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGIGSEM 72
NV I DC+I G+D + +K G + G + NIT+ +SG + GV IGSEM
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSG----HGGVVIGSEM 306
Query: 73 SGG---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
SGG +F+ R K +GRGG +E+I + I M+ ++
Sbjct: 307 SGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ 353
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V +E+ + G+D + +K G N G + +PS I++R + + G+ +GSE
Sbjct: 255 DSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGGIVVGSE 313
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
MSGGI + R K +GRGG +ENI I I+M +
Sbjct: 314 MSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDID 361
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V +E+ + G+D + +K G N G + +PS I++R + + G+ +GSE
Sbjct: 254 DSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGGIVVGSE 312
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
MSGGI + R K +GRGG +ENI I I+M +
Sbjct: 313 MSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREID 360
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITM---RRVSGTTPTYSGVGIGS 70
S NV I + +G+D +AVK G N G + PS NI + R +G + GV IGS
Sbjct: 279 SRNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAG----HGGVVIGS 334
Query: 71 EMSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERV-KIPIRIGRG 113
EMSG + N R K + RGG +E + R + V IRI
Sbjct: 335 EMSGDVRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVPAVADAVIRI--- 391
Query: 114 SNSHPDEGRDPKALPKIRGISFVNVVSV 141
N H +EG P +RGI NV SV
Sbjct: 392 -NFHYEEGDVGDFTPTVRGIHIDNVHSV 418
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 21/107 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGIGSEM 72
NV I DC+I G+D + +K G + G + NIT+ +SG + GV IGSEM
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSG----HGGVVIGSEM 306
Query: 73 SGG---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
SGG +F+ R K +GRGG +E+I + I M+ ++
Sbjct: 307 SGGVKRVAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ 353
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IEDC ++G+D +A+K G N G + PS+ I +R + GV IGSE+SGG
Sbjct: 280 VLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCK-MRDGHGGVVIGSEISGGA 338
Query: 77 FN----------------ARTKIDKGRGGNIENITIRYIKMERV-KIPIRIGRGSNSHPD 119
+ R K + RGG IE+I +R +++ +V IR+ N + +
Sbjct: 339 HHIYAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRV----NFYYE 394
Query: 120 EGRDPKALPKIRGISFVNVVS 140
EG P +R I N+ S
Sbjct: 395 EGDAGPFDPIVRHIEVRNLTS 415
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I Y G+D +AVK G + G RPS +I++RR + V IGSEM+GG
Sbjct: 284 DVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRPSKDISIRRCC-MRDGHGSVTIGSEMAGG 342
Query: 76 IFN--------------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIG----RGSN 115
+ N R K +GRG + ++ I +I+M+ V P I +
Sbjct: 343 VKNLTVKDCMFLHTDRGLRIKTRRGRGKDAVVDGIVFEHIRMDHVMTPFVINCFYFCDPD 402
Query: 116 SHPDEGRDPKAL------PKIRGISFVNVVSVN 142
H + R +AL P I+ + F ++ + N
Sbjct: 403 GHSEYVRTKEALLVDERTPLIKSLCFKDIEAEN 435
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 12 DLSTNVCIEDCYIES-GNDLVAVKKGWNHYGIAMARPSSNITMR--RVSGTTPTYSGVGI 68
D S++V +E+ + G+D V VK G + G + RPS NI +R R+SGT G I
Sbjct: 261 DSSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRGNRMSGTE---GGFAI 317
Query: 69 GSEMSGG---IFNARTKIDK-----------GRGGNIENITIRYIKMERVKIPIRI---- 110
GSEMSGG +F R +D RGG +E + IR I + + +R
Sbjct: 318 GSEMSGGVNTVFVERNTMDTIGSALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDY 377
Query: 111 -GRGSNSHPDEGRDPKALPKIRG--ISFVNVVSVNTIKAPVR 149
G +HP RD + +R +S + +V +PVR
Sbjct: 378 SGYQGGNHPPAFRD-FVVENVRAGIVSDAAITAVGVPSSPVR 418
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ +K
Sbjct: 320 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 363
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 214 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 271
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 272 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 321
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 320
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ +K
Sbjct: 321 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 320
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ +K
Sbjct: 321 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 320
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ +K
Sbjct: 321 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLAGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + I M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIK 353
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 320
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ +K
Sbjct: 321 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVK 364
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 197 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 254
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 255 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 304
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++ NV IEDC + G+D +A+K G N + PS NI +R + + IGSE
Sbjct: 269 EMCENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCL-VKNGHQLLAIGSE 327
Query: 72 MSGGI-----------FNART------KIDKGRGGNIENITIRYIKMERV 104
+SGG+ NAR K ++ RGG ++N+ +R + +++
Sbjct: 328 LSGGVENVFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKM 377
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDINFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFP 314
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+ C ++G+D +A+K G + G PS NI +R ++GV IGSE++GG
Sbjct: 265 NVLIDSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCL-MKDGHAGVAIGSEITGG 323
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG ++NI +R I + K I + H +
Sbjct: 324 CQNVWVENCRMDSPELDRIIRIKSNSERGGEVKNIFVRDITVGECKESILGIELNYWHVE 383
Query: 120 EGRDPKALPKIRGISFVNVVS 140
+G P P I N+ S
Sbjct: 384 DGPYP---PYFHNIHLENITS 401
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 30/153 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N +E C ++G+D + +K G + G P+ NI +R + + G IGSEMSGG
Sbjct: 509 NGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCT-VFHGHGGFVIGSEMSGG 567
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV-------------KIPI 108
+ N R K +GRGG +ENI + I M + K P+
Sbjct: 568 VRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAKDPV 627
Query: 109 RIGRGSNSHPDEGRDP--KALPKIRGISFVNVV 139
+ N P+ +P + P+ R N+V
Sbjct: 628 SLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIV 660
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + + GV IGSEMSG
Sbjct: 244 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS-GHGGVVIGSEMSGS 302
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + I M +K
Sbjct: 303 VRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIK 346
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IE+C + G+D +A+K G N G + PS NI +R + + + IGSE
Sbjct: 262 EMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCT-VKNGHQLIAIGSE 320
Query: 72 MSGGIFNA 79
+SGGI N
Sbjct: 321 LSGGIENV 328
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 20/144 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S N+ I++C +G+D +A+K G + G +A PS NI ++ + GV IGSE
Sbjct: 277 EYSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGSE 335
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK-IPIRIGRGS 114
+S G+ N R K + RGG IEN+ +R +++ VK +++
Sbjct: 336 ISAGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFY 395
Query: 115 NSHPDEGRDPKALPKIRGISFVNV 138
N + + + +P IR I+ NV
Sbjct: 396 NVYGSQTGN--FIPVIRNINLENV 417
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V I + G+D +A+K G + G + R S IT+R S + V IGSEM+GG+
Sbjct: 283 VLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCS-MNFGHGAVVIGSEMAGGV 341
Query: 77 ---------FNA-----RTKIDKGRG--GNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
FN R K +GRG +E++T R+I+ME+V P+ + PD
Sbjct: 342 KHILVEQCLFNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPD 400
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V I+ C ++G+D +A+K G N G + PS N+ ++ + GV +GSE S
Sbjct: 268 SVDVLIDGCTFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCV-MKDGHGGVTMGSECS 326
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
GGI N R K + RGG IE++ +R +K +V + + +
Sbjct: 327 GGIRNVFAQDCQMDSPNLNVALRFKNNAVRGGVIEHVYMRNVKAGQVA---QAAIDVDFY 383
Query: 118 PDEGRDPKALPKIRGISFVNV 138
+EG P +R + VN+
Sbjct: 384 YEEGEKGSFTPVVRDVEVVNL 404
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C ++G+D +A+K G N G + N+ +R + G+ +GSE+SGG
Sbjct: 282 NVLIEQCVFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCE-MRDGHGGLVLGSEISGG 340
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
N R K + RGG IE + +R++ +++ + + + N H +
Sbjct: 341 ARNIFMEHCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVV----NFHYE 396
Query: 120 EGRDPKALPKIRGI 133
EG + +P +R I
Sbjct: 397 EGEAGEHMPTVRDI 410
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCY-MKKGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 331 YRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 252 NVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 310
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK-IPIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + I M +K + + + P E
Sbjct: 311 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYSEMPVE 370
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP 157
+ P R IS + +V +K PV+ + AP
Sbjct: 371 PMSERT-PLFRDISISGLTAVG-VKTPVKIVGLEEAP 405
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I++ +G+D +A+K G N+ G +PS NI +R + GV IGSE+SGG
Sbjct: 269 NVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCV-MEDGHGGVVIGSEISGG 327
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKMERVK 105
N R K + RGG IENI +R +K+ + K
Sbjct: 328 CQNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCK 373
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C +G+D +A+K G + G PS NI +R ++GVGIGSE++GG
Sbjct: 266 NVLIERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCE-MKDGHAGVGIGSEITGG 324
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKM 101
N R K + RGG ++N+ +R +++
Sbjct: 325 CENVWVENCKMDSPNLTRVIRIKSNPERGGEVKNLYVRNVEV 366
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
STN IE+ + G+D + +K G + G + +P+ N+ +R + G IGSEMS
Sbjct: 277 STNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCV-VYHAHGGFVIGSEMS 335
Query: 74 GG-----IFNA---------RTKIDKGRGGNIENITIRYIKMERV 104
GG ++N R K +GRGG ++NI + I M+ +
Sbjct: 336 GGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDI 380
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCK-MKNGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R I + + +
Sbjct: 331 YRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQCR 376
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S NV I++C ++G+D +A+K G N G + PS NI + + GV +GSE
Sbjct: 271 EYSKNVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCE-MKDGHGGVVMGSE 329
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
+S G+ N R K + RGG +EN+ ++ I++ +VK
Sbjct: 330 ISAGVRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVK 379
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 331 YRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 214 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 271
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S GI + R K + RGG IENI + + M V+ P
Sbjct: 272 VSAGISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 321
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGGN+E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR 54
D TNV IEDCYI SG+D VAVK GW+ YGI P+ + +
Sbjct: 157 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGGN+E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 331 YRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V I + G+D +A+K G + G + R S IT+R S + V IGSEM+GG+
Sbjct: 172 VLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCS-MNFGHGAVVIGSEMAGGV 230
Query: 77 ---------FNA-----RTKIDKGRG--GNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
FN R K +GRG +E++T R+I+ME+V P+ + PD
Sbjct: 231 KHILVEQCLFNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPD 289
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C+I+ G+D +A+K G A P NIT+ + + GV IGSEMSG
Sbjct: 192 SNVRISNCHIDVGDDCIAIKAGTEE--TAERVPCENITITNCT-MIHGHGGVVIGSEMSG 248
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG +E+I + + ME V P
Sbjct: 249 NIRNVTISNCVFQHTDRGIRLKSRRGRGGIVEDIRVSNLVMENVICP 295
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV IEDC +G+D +A+K G ++ + RP+ N+ +R S + +GV IGSE+SG
Sbjct: 252 TNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSFRSKA-NGVCIGSEISG 310
Query: 75 GIFNART--------------KIDKGRGGNIENITIRYIKMERVK 105
G+ N K + RGG IE++ + ++ + V+
Sbjct: 311 GVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVEADSVR 355
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + + GV IGSEMSG
Sbjct: 260 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG-HGGVVIGSEMSGS 318
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + + M +K + + + P E
Sbjct: 319 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAE 378
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVR 149
+ + P R + ++ ++V +K P++
Sbjct: 379 PKSERT-PIFRNVH-ISGMTVTNVKTPIK 405
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+ R K +GRGG +E+I + + M +K + + + P E
Sbjct: 310 VCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAE 369
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVR 149
+ + P R + ++ ++V +K P++
Sbjct: 370 PKSERT-PIFRNVH-ISGMTVTNVKTPIK 396
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I + ++G+D + +K G N G P N+ ++ + + G IGSEMSGG
Sbjct: 240 NVVIINSLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKN-NTVLHGHGGFVIGSEMSGG 298
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV---KIPIRIGRGSNSHP 118
+ N R K +GRGG +ENI I I M+ + I + + SN P
Sbjct: 299 VKNIYISDCTFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKP 358
Query: 119 DEGRD-PKALPKIRGISFVNVV 139
E D + P R I N++
Sbjct: 359 AERTDVNEGTPVFRNIEMKNLL 380
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 183 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 240
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S GI + R K + RGG IENI + + M V+ P
Sbjct: 241 VSAGISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 290
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCK-MKNGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R I + + +
Sbjct: 331 YRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITVGQCR 376
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V +E+ + G+D + +K G N G + +PS I +R + + G+ +GSE
Sbjct: 255 DSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCT-VYHGHGGIVVGSE 313
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
MSGGI + R K +GRGG +ENI I I+M +
Sbjct: 314 MSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDI 360
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIG 69
D +V + C ++ G+D +A+K G GIA RP+ N+ RVSG T + G+ IG
Sbjct: 218 DSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNV---RVSGCTVRSAHGGIVIG 274
Query: 70 SEMSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SE + GI F+ R K +GRGG I ++ + M P+ I
Sbjct: 275 SETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAI 329
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V I+ C I SG+D +++K G M RP+ ++ + + ++ +GIG+E
Sbjct: 229 DSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTLEGRGFACLGIGTE 288
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIP-IRIGRGSN 115
S GI N K GRG IEN+T+R + R+++ +RI + +
Sbjct: 289 SSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAARMRMGFLRIDQTNA 348
Query: 116 SHPDEGRDP--KALPKIRGISFVNV 138
D P + LP R F N+
Sbjct: 349 GIQDADPVPGLEGLPLFRNFRFENI 373
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V +E C + +D + VK G + R + +I +R T SG+ +GSE
Sbjct: 203 DSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDC--TLLKGSGITLGSE 260
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI N R K + RGG I+NI +R++KME V P +
Sbjct: 261 TSGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPFML 313
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N +E+C ++G+D + +K G + G P+ N +R + G IGSEMSGG
Sbjct: 509 NGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCR-VYQAHGGFVIGSEMSGG 567
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERV---KIPIRIGRGSNSHP 118
+ N R K +GRGG +ENI + I M ++ I + +
Sbjct: 568 VRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAILFDMYYAAKDPV 627
Query: 119 DEGRDPKALPKIRG 132
+ D LP I G
Sbjct: 628 PQAGDKNELPTIEG 641
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
+F+ R K +GRGG +E+I + + M +K + + + P E
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMPAE 369
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP 157
+ + P R + ++ ++V +K P++ + AP
Sbjct: 370 PKSERT-PIFRNVH-ISGMTVTNVKTPIKIVGLEEAP 404
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG-HGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 353
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC + G+D + +K G N +G P+ N+ + + G IGSEMSGG
Sbjct: 228 NVVIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCI-VYHGHGGFTIGSEMSGG 286
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
+ N R K +GRGG +ENI I I M+ +
Sbjct: 287 VRNIKVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDI 329
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG-HGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 353
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 353
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG-HGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 353
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 353
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 251 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 310 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 353
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + + GV IGSEMSG
Sbjct: 260 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSG-HGGVVIGSEMSGS 318
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 319 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 362
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 30/148 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV I+D Y ++G+D +A+K G N G + PS NI + + + GV IGSE+S
Sbjct: 269 SKNVLIKDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIEG-NEMKDGHGGVVIGSEIS 327
Query: 74 GGIFNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGR 112
G + N R K + RGG IE+I T++ + E ++I +
Sbjct: 328 GSVRNVFAQHNVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKSVGSEVIQIDM---- 383
Query: 113 GSNSHPDEGRDPKALPKIRGISFVNVVS 140
+ +EG P +R I+ N+ S
Sbjct: 384 ----YYEEGDTGNFTPVVRNINIENLQS 407
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 207 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MKNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IENI +R + + + +
Sbjct: 333 YRNLFVEDCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCR 378
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 226 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 284
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 285 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 328
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 207 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDINFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 207 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRVENLNMMDVQFP 314
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ ++
Sbjct: 320 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 207 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 207 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 253 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSE 311
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IENI ++ ++
Sbjct: 312 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNVE 355
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + + P NIT+ + + GV IGSEMSG
Sbjct: 261 NVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCT-MLSGHGGVVIGSEMSGS 319
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E+I + + M +K
Sbjct: 320 VRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIK 363
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ ++
Sbjct: 320 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 207 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 314
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ ++
Sbjct: 320 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIK 100
+SGGI N K + RGG IEN+ ++ ++
Sbjct: 320 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQ 363
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 28/151 (18%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI-- 76
+EDC + G+D + +K G + G + P +I +R + G IGSEMSGG+
Sbjct: 270 VEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCR-VYHGHGGFVIGSEMSGGVRR 328
Query: 77 ------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP-DEGRD 123
R K +GRGG +E+I I I+M + +G + H EG++
Sbjct: 329 LRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSI-----VGEAISFHLFYEGKE 383
Query: 124 PKALPKIRGISFVNVVSVNTIKAPVRAGIIV 154
G++ N+V V +++ P+ GI +
Sbjct: 384 GS------GVAGENIVPV-SVETPIFRGITI 407
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 183 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 240
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 241 VSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 290
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + +C+ ++G+D + +K G + G P N+ ++ + + G IGSEMSGG
Sbjct: 299 NVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMSGG 357
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +ENI I I M + IP
Sbjct: 358 VRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIP 401
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI-----TMRRVSGTTPTYSGV 66
D S++V + C I+ G+D + +K G + G + PS NI M+R G G
Sbjct: 246 DSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHG------GF 299
Query: 67 GIGSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
IGSEMSGG+ N R K +GRGG IEN+ + I M +
Sbjct: 300 VIGSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNI 351
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 70/172 (40%), Gaps = 27/172 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I C I G+D VAVK G PS NI +R + V IGSEMS
Sbjct: 279 SNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSENIEIRNCL-MEHGHGAVVIGSEMSC 337
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
G+ N R K + RGG ++ I ++ ++M V +P+ I N D
Sbjct: 338 GVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELKNVQMNGVFVPLAINCFYNCGAD- 396
Query: 121 GRDPKALPKIRGISFVNVVSVNTIKAPVRAGII---VLAPSVKWQSQFVSGF 169
DP S VV+ + P I+ VL VK + FV G
Sbjct: 397 -YDPLY-------SSDKVVADVNERTPTIGSIVMKNVLCEDVKSMAAFVYGL 440
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V I +C + G+D +A+K G + G + R SS I + R + + GV IGSE
Sbjct: 183 DSSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSE 240
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K + RGG IENI + + M V+ P
Sbjct: 241 VSAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFP 290
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S NV I C G+D +A+K G + + + + +R + GV IGSE
Sbjct: 281 EASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLTEKVFVRNCY-MEYGHGGVVIGSE 339
Query: 72 MSGG---------IFN-----ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
MSGG IFN R K +GRGG I+ I I+M RVK P I
Sbjct: 340 MSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTI 392
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + +C+ ++G+D + +K G + G P N+ ++ + + G IGSEMSGG
Sbjct: 299 NVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMSGG 357
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +ENI I I M + IP
Sbjct: 358 VRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIP 401
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + PS NI +R ++ +GIGSE
Sbjct: 245 EMSRNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCD-ILNGHTLLGIGSE 303
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIK 100
+SGG+ N K + RGG IENI + I+
Sbjct: 304 ISGGVRNIYMTRCKAPQNVHRLFFLKTNHRRGGFIENIYLEDIE 347
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E + G+D + +K G + G A P+ N+ +R S + G IGSEMSGG
Sbjct: 285 NVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRH-STVYHAHGGFVIGSEMSGG 343
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
N R K +GRGG +ENI R I M+ +
Sbjct: 344 AKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDI 386
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCF-MKNGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 331 YRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 33/173 (19%)
Query: 44 MARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNART------------KIDK--GRGG 89
+ RP + +RR S P +G+ +GSEMSGGI R KI+ GRGG
Sbjct: 242 VGRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGG 301
Query: 90 NIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
++N+ R ++ K + P +G PKA P + I+F ++ N +
Sbjct: 302 YVQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVSTSAKL 361
Query: 150 AGI--------------IVLAPSVKWQSQF----VSGFNSQVFPLPCPQLQNK 184
G+ I L+P+ Q QF + G + V P PC L +K
Sbjct: 362 EGMKSNPFTGVCMSNVSISLSPNASKQ-QFHCMDIVGESRSVKPQPCSLLPDK 413
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+++ N +EDC + G+D V +K G N + P+ NI +R + ++ +GIGSE
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RG IENI + I+ V+ + I
Sbjct: 314 ISGGIRNVYMHDCKAPQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEI 367
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 17/105 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
++ +ED ++G+D +A+K G N G + P+ N+ +RR + GV +GSE +GG
Sbjct: 663 DILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCV-MKDGHGGVVLGSECTGG 721
Query: 76 IFNARTK--------IDKG--------RGGNIENITIRYIKMERV 104
I N + +D+G RGG +EN+ +R +K+ RV
Sbjct: 722 IRNIFVEDCEMDSPDLDRGLRFKNNAVRGGVLENVFMRNVKIGRV 766
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+++ N +EDC + G+D V +K G N + P+ NI +R + ++ +GIGSE
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RG IENI + I+ V+ + I
Sbjct: 314 ISGGIRNVYMHDCKAPQSVRRLFFVKTNHRRGAFIENIHMENIRTGHVQRVLEI 367
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C I+ +D + +K G + G+ + RP+ NI +R + + G G+
Sbjct: 282 DSSTNILIENCEIDCNDDNICLKAGRDADGLRVNRPTENIVIRNCT----VHKGGGLITC 337
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SGGI N + K RGG IENI I ++ + V+
Sbjct: 338 GSETSGGIRNVLAHDLKAFGTSNVLQLKSAMTRGGVIENIYITRVEAKNVR 388
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S NV I C G+D +A+K G + + + + +R + GV IGSE
Sbjct: 281 EASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLTEKVFVRNCY-MEYGHGGVVIGSE 339
Query: 72 MSGG---------IFN-----ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
MSGG IFN R K +GRGG I+ I I+M RVK P I
Sbjct: 340 MSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTI 392
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IEDC + G+D V+VK G + +A P N+ +R + + +GSE
Sbjct: 267 EMSQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCR-VLNGHQLMAVGSE 325
Query: 72 MSGGIFNARTK----IDKGRGGNIENITI 96
+SGGI N + GRGG+ + I
Sbjct: 326 LSGGIENIWVDDCHFVGDGRGGDDHAVPI 354
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+V IE +G+D V VK G + G + RPS N+ +R G+ +GSE
Sbjct: 263 DSSTDVLIEHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRH--NDMGGEDGIALGSE 320
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKME 102
MSGGI + R K + RGG +E+I +R ++
Sbjct: 321 MSGGISHVYFTDNTLRSGAAAIRFKGNLDRGGTVEHIRVRNFDID 365
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MKNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 378
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + +C+ ++G+D + +K G + G P N+ ++ + + G IGSEMSGG
Sbjct: 299 NVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMSGG 357
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
+ N R K +GRGG +ENI I I M
Sbjct: 358 VRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM 397
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 263 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSE 321
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI 99
+SGGI N K + RGG IENI ++ +
Sbjct: 322 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNV 364
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S NV I +C ++G+D +A+K G + G +A S NI ++ + GV IGSE
Sbjct: 272 EYSKNVIIRNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCK-MFDGHGGVTIGSE 330
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
+S G+ N R K + RGG IENI +R I + VK
Sbjct: 331 ISAGVSNVFVENCIMDSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVK 380
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 21/108 (19%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGT--TPTYSGVGIGSEM 72
T+V I+DC ++G+D +A+K G N G + P+ NI V+G + G+ +GSE+
Sbjct: 276 TDVLIKDCDFDTGDDCIAIKSGRNADGRRLKAPTENII---VTGCRMKDGHGGITVGSEI 332
Query: 73 SGGIFN----------------ARTKIDKGRGGNIENITIRYIKMERV 104
SGG+ N R K + RGG +EN+ R I + +V
Sbjct: 333 SGGVRNLFASNCRLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQV 380
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 27/165 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIA-MARPSSNITMRRVSGTTPTYSGVGIGS 70
+ + +V IE+ ++G+D VA+K G +H G A A PS NI +R + GV IGS
Sbjct: 248 EYAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCN--FKGLHGVVIGS 305
Query: 71 EMSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
EMS G+ N K + RGG I+N+ ++ ++++ V+ + I +N
Sbjct: 306 EMSAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYI--TAN 363
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVK 160
H G I I F N+ T +GI++ S K
Sbjct: 364 YH---GEGEGYQSDISNIHFSNI----TCNRASESGIVIQGFSDK 401
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V +E C + +D + VK G +AR + +I +R T SG+ +GSE
Sbjct: 203 DSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDC--TLLKGSGITLGSE 260
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI N R K + RGG I+NI +R++ ME V P +
Sbjct: 261 TSGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMEDVGYPFML 313
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSE 319
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI 99
+SGGI N K + RGG IENI ++ +
Sbjct: 320 ISGGIRNIYMHDCTAPYSVMRLFFVKTNHRRGGFIENIYMKNV 362
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +EDC + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 250 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCR-ILKGHTLLGIGSE 308
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYI 99
+SGGI N K + RGG IENI ++ +
Sbjct: 309 ISGGIRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNV 351
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 378
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V +E C + +D + VK G +AR + +I +R T SG+ +GSE
Sbjct: 203 DSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDC--TLLKGSGITLGSE 260
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI N R K + RGG I+NI +R++ ME V P +
Sbjct: 261 TSGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMEDVGYPFML 313
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 378
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ + NV I++C +G+D +A+K G N G + PS NI + + GV +GSE
Sbjct: 273 EYAKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCK-MIDGHGGVVMGSE 331
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
+S G+ N R K + RGG +EN+ +R I + +VK
Sbjct: 332 ISAGVRNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVK 381
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+DCY ++G+D +A+K G + G + RP+ N + + GV IGSE++GG
Sbjct: 278 NVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGSEIAGG 336
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKM 101
N R K RGG IEN+ ++ +++
Sbjct: 337 ARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEV 378
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 378
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+DCY ++G+D +A+K G + G + RP+ N + + GV IGSE++GG
Sbjct: 278 NVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGSEIAGG 336
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKM 101
N R K RGG IEN+ ++ +++
Sbjct: 337 ARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEV 378
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 378
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 264 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 322
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 323 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 368
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DCY ++G+D +A+K G + G + RP+ N + + GV IGSE++GG
Sbjct: 289 NVWIRDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCV-MKDGHGGVVIGSEIAGG 347
Query: 76 IFN----------------ARTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ ++ +++ K
Sbjct: 348 AKNIYAINCEMDSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFK 393
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 378
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N+ IE+C + G+D +AVK G N + P+ NI +R S + + IGSE
Sbjct: 261 EMSQNMLIENCIFDQGDDAIAVKSGRNQDAWRLNMPTKNIVIRN-SLVKNGHQLLAIGSE 319
Query: 72 MSGGIFNA-----------------RTKIDKGRGGNIENITIRYIKMERV 104
+SGG+ N K ++ RGG + N+ ++ I+ ++
Sbjct: 320 LSGGVENVYMENCEVQEGAKLNHLLYVKTNERRGGYVRNVHMKNIQCGKI 369
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 272 NVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCF-MKNGHGGVVIGSEISGG 330
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 331 YRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 376
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S + +E I++ +D + +K G + G+ + RP+ N+ +R S Y+GV GSE
Sbjct: 246 DSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIRN-STIRAAYAGVTFGSE 304
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI N R K RGG +I I I + + + IRI
Sbjct: 305 TSGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDISDIDVAQAETGIRI 358
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I Y G+D +A+K G + G RPS N+ +R+ + + IGSEM+GG
Sbjct: 282 NVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRPSENLEIRQCC-MRDGHGSITIGSEMAGG 340
Query: 76 IFNA--------------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K +GRG + I+ + I+M+ V P+ I PD
Sbjct: 341 VKNLTVRECLFIHTDRGLRIKTRRGRGKDAIIDGVLFENIRMDHVMTPVVINCFYFCDPD 400
Query: 120 ------EGRDPKAL----PKIRGISFVNVVSVNTIKA 146
+ ++P + P I ++F N+ N A
Sbjct: 401 GHSEYVQSKNPYEVDDRTPHIGELTFRNLDCTNCHAA 437
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 378
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 274 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 332
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCR 378
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 293 NVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCF-MKNGHGGVVIGSEISGG 351
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 352 YRNLYVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNVTVGQCR 397
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+++ N +EDC + G+D V +K G N + P+ NI +R + ++ +GIGSE
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RG +ENI + I+ V+ + I
Sbjct: 314 ISGGIRNVYMHDCKAPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEI 367
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
+SGGI N R K RGG +ENIT I ++ + I
Sbjct: 946 ISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRM 1005
Query: 117 HPDEGRDPKALPKIRGISFVNV 138
P L +R I F N+
Sbjct: 1006 VPPLSPAHYPLTSLRNIHFKNI 1027
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+++ N +EDC + G+D V +K G N + P+ NI +R + ++ +GIGSE
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RG +ENI + I+ V+ + I
Sbjct: 314 ISGGIRNVYMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEI 367
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I G+D + +K G + G + P+ N T+ + + GV IGSEMSGG
Sbjct: 244 NVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCT-MLRGHGGVVIGSEMSGG 302
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
+ N R K +GRGG +E+I + I M ++
Sbjct: 303 VKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIR 346
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 23/143 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIA-MARPSSNITMRRVSGTTPTYSGVGIGS 70
+ + +V IE+ +G+D +A+K G +H G A A PS NI +R + GV IGS
Sbjct: 251 EYAKDVLIENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRNCN--FKGLHGVVIGS 308
Query: 71 EMSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
EMS G+ N K + RGG I+N+ +R I+++ V+ + I +N
Sbjct: 309 EMSAGVQNVYVENCKTVGYLKRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYI--TAN 366
Query: 116 SHPDEGRDPKALPKIRGISFVNV 138
H EG+ ++ +I +SF ++
Sbjct: 367 YH-GEGKGFQS--EISNVSFSDI 386
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IE+C + G+D +A+K G N + S NI MR + + V IGSE
Sbjct: 262 EMSQNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCT-VKNGHQLVAIGSE 320
Query: 72 MSGGIFNA 79
+SGGI N
Sbjct: 321 LSGGIENV 328
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I G+D +A+K G G + PS NI + + GV IGSEMSGG
Sbjct: 280 NVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENINIENCH-MEFGHGGVVIGSEMSGG 338
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-------GS 114
I N R K +GRGG I+ I I M++V P I G
Sbjct: 339 IKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGIHAENIVMDKVLTPFVINEFYYCDSDGK 398
Query: 115 NSH---PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQ 162
+ D+ + P I+ I+F N+V N + V AG + P K +
Sbjct: 399 TEYVWNKDKLEITEETPVIKNITFKNMVCKN---SEVCAGFMYGLPERKIE 446
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 30/163 (18%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
++ C ++G+D + +K G + G P+ N+ ++ + + G IGSEMSGG+ N
Sbjct: 512 VDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTT-VFHGHGGFVIGSEMSGGVKN 570
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERV-------------KIPIRIG 111
R K + RGG +ENI I I M + K P+ +
Sbjct: 571 VFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNIPGEAILFDMYYEAKDPVPLD 630
Query: 112 RGSNSHPDEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
S++ P P + P+ + NVVS + A V G+
Sbjct: 631 GDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRGL 673
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+C ++G+D +A+K G N G PS NI +R + GV IGSE+SGG
Sbjct: 185 NVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM-MRNGHGGVVIGSEISGG 243
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
N R K RGG IEN+ +R + + + +
Sbjct: 244 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCR 289
>gi|194695268|gb|ACF81718.1| unknown [Zea mays]
Length = 120
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 19/101 (18%)
Query: 101 MERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------I 153
ME V + I ++HPD+ DP LP I ++ N+ N A V +GI I
Sbjct: 1 MENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAI 60
Query: 154 VLA-----------PSVKWQSQFVSGFNSQVFPLPCPQLQN 183
L+ PS W VSG++ VFP PC +L++
Sbjct: 61 CLSNLNFSMAAGSGPS-SWSCSDVSGYSEAVFPEPCTELRD 100
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 25/122 (20%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPT--YSGVGIGSEMS 73
NV I C+I+ G+D +A+K G +A N+ V+G T + GV +GSEMS
Sbjct: 197 NVRISGCHIDVGDDCIALKAGTEASPERVA--CENVV---VTGCTLVHGHGGVVLGSEMS 251
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
GGI N R K +GRGG +E++ + + M+ V P+ + N H D
Sbjct: 252 GGIRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVL----NQHYD 307
Query: 120 EG 121
G
Sbjct: 308 RG 309
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+++ N +EDC + G+D V +K G N + P+ NI +R + ++ +GIGSE
Sbjct: 260 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNIPTENIVIRNCN-IVEGHTLLGIGSE 318
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RG +ENI + I+ V+ + I
Sbjct: 319 ISGGIRNVYMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEI 372
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V I+ C ++ +D +++K G G + RP+ ++ + + ++ +GIGSE
Sbjct: 233 DSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNCTFMDHFWACIGIGSE 292
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIP-IRIGRGSN 115
SGGI N R K GRG IE+I++ +++ K +R +
Sbjct: 293 TSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEVSGAKQGFLRFNILDS 352
Query: 116 SHPDEGRDP--KALPKIRGISFVNV 138
DE P + +P IR F N+
Sbjct: 353 GKQDEFPVPGEEGIPTIRNFHFSNI 377
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+++ N +EDC + G+D V +K G N + P+ NI +R + ++ +GIGSE
Sbjct: 260 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNIPTENIVIRNCN-IVEGHTLLGIGSE 318
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RG +ENI + I+ V+ + I
Sbjct: 319 ISGGIRNVYMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEI 372
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSE 319
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIR 97
+SGG+ N K ++ RGG +ENI +
Sbjct: 320 LSGGVRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLE 360
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N IE+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 261 EMSRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSE 319
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIR 97
+SGG+ N K ++ RGG +ENI +
Sbjct: 320 LSGGVRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLE 360
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +E C + G+D V +K G N + P NI +R + + +GIGSE
Sbjct: 259 EMSRNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCA-IRKGHVLLGIGSE 317
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIK 100
MSGG+ N K + RGG IENI + I+
Sbjct: 318 MSGGVRNIYMHDCTVPESVQRLFFLKTNHRRGGFIENIYLENIE 361
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + G + NIT+ + GV IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCV-MLSGHGGVVIGSEMSGG 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E + + I M+ ++
Sbjct: 310 VRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + G + NIT+ + GV IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCV-MLSGHGGVVIGSEMSGG 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E + + I M+ ++
Sbjct: 310 VRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + G + NIT+ + GV IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCV-MLSGHGGVVIGSEMSGG 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E + + I M+ ++
Sbjct: 310 VRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I DC+I G+D + +K G + G + NIT+ + GV IGSEMSGG
Sbjct: 251 NVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCV-MLSGHGGVVIGSEMSGG 309
Query: 76 ---------IFNA-----RTKIDKGRGGNIENITIRYIKMERVK 105
+F+ R K +GRGG +E + + I M+ ++
Sbjct: 310 VRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQ 353
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 28/144 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITM---RRVSGTTPTYSGVGI 68
D STN + + +G+D VA+K G N G A+ RPS++I + R SG G+ I
Sbjct: 330 DSSTNCTLFASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDCRVGSG-----QGLCI 384
Query: 69 GSEMSGGIFNAR--------------TKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSEMSGG+ + + K RGG + +T+R K RV I +
Sbjct: 385 GSEMSGGVEDVQIWDCDLENSFSGLEIKATAKRGGYVRGVTVRDCKAPRVMIH------A 438
Query: 115 NSHPDEGRDPKALPKIRGISFVNV 138
+ D+G +P + +F +
Sbjct: 439 VPYNDDGEAADTVPVLEHFTFAGL 462
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN-------- 78
G+D +AVK G + G RPS +I + R + V IGSEM+GG+ N
Sbjct: 306 GDDCIAVKSGKIYMGTTYKRPSEDIVVSRCC-MRDGHGSVTIGSEMAGGVKNLTVRDCVF 364
Query: 79 ------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPDEG----RDPKA 126
R K +GRG N ++ I I M++VK P I PD R +
Sbjct: 365 RHTDRGLRIKTRRGRGKNAVVDGILFERIHMDQVKTPFVINSFYYCDPDGNSEYVRTKER 424
Query: 127 LPK------IRGISFVNVVSVN 142
LP I+ ++F ++ +VN
Sbjct: 425 LPVDDRTPWIKHLTFRDIEAVN 446
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C ++G+D +A+K G + G PS NI +R ++GV IGSE++GG
Sbjct: 241 NVLIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGG 299
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYI 99
N R K + RGG +EN+ +R I
Sbjct: 300 CRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNI 339
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N +E+C + G+D V +K G N + P NI +R ++ +GIGSE
Sbjct: 551 EMSKNFLVENCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 609
Query: 72 MSGGIFNAR---------------TKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGGI N K + RGG IENI ++ + V+ + I
Sbjct: 610 ISGGIRNIYMHDCTVPNSVMRLFFVKTNHRRGGFIENIYMKDVNAGNVQRVLEI 663
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 58/143 (40%), Gaps = 36/143 (25%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
NV I D + G+D + K G + G P+ N+ ++ Y G G IGSEM
Sbjct: 299 NVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKN----NIVYHGHGGFVIGSEM 354
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIR--------- 109
SGG+ N R K +GRGG +ENI I I M + IP
Sbjct: 355 SGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDM--INIPTDVINFNLFYG 412
Query: 110 ----IGRGSNSHPDEGRDPKALP 128
+ S DE RD A+P
Sbjct: 413 GNSPVLEADQSAEDEARDEVAVP 435
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E+ ++G+D + +K G + G P+ N+ MR + + G IGSEMSGG
Sbjct: 284 NVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRN-NIVYRAHGGFVIGSEMSGG 342
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
N R K +GRGG +ENI I+ I M +
Sbjct: 343 ARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDI 385
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGI 68
+++ N IEDC E G+D V +K G N + P+ NI +R ++G T +G+
Sbjct: 263 EMTRNFLIEDCVFEQGDDAVVIKSGRNQDAWRLNTPTENIVVRNCLVLAGQTL----LGV 318
Query: 69 GSEMSGGIFNART---------------KIDKGRGGNIENITIRYIK 100
GSE+SGG+ N K + RG +EN+ + IK
Sbjct: 319 GSEISGGVRNIYMHDCEAPNNVHRLFFIKTNHRRGAFVENVYMEKIK 365
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N+ IE+C + G+D +AVK G N +A P+ NI ++ + + IGSE
Sbjct: 261 EMSQNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCK-IINGHQLMAIGSE 319
Query: 72 MSGGIFN---ARTKIDKG--------------RGGNIENITIRYIK 100
+SGGI N + ++++G RGG + NI + I+
Sbjct: 320 LSGGIENIYMSNCQVEQGAKLNHLLFIKTNERRGGIVSNIYMDSIQ 365
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STN I C +G+D +A+K G N G ++RPS +I R G+ IGSE
Sbjct: 304 DSSTNCTIFGCTFNTGDDSIAIKSGKNPEGNEISRPSEHI--RIFDCKCAMGRGITIGSE 361
Query: 72 MSGGIFNAR--------------TKIDKGRGGNIENITIRYIKMERV 104
MSGGI + + K K RGG ++N+ +R + R+
Sbjct: 362 MSGGINDVQIWDCDISSSRHGIEIKGTKKRGGYVKNVKVRDSRTARI 408
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV IE+ + G+D + +K G + G A P+ ++ +R + + G +GSEMSG
Sbjct: 276 SNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCT-VYAAHGGFVVGSEMSG 334
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
G+ N R K +GRGG +ENI I+ I M+ +
Sbjct: 335 GVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDI 378
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+S G+ + R K K RG IENI + + M V+ P
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVENLNMIDVQFP 314
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
+SGGI N R K RGG +ENIT I ++ + I
Sbjct: 946 ISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRM 1005
Query: 117 HPDEGRDPKALPKIRGISFVNV 138
P L +R I F N+
Sbjct: 1006 VPPLSPAHYPLTCLRNIHFKNI 1027
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 30/187 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIPI------RIGRGSNSHP 118
R K +GRGG +E+I + I M+ V P G+G
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKR 309
Query: 119 DEGRDP----KALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNSQVF 174
+ P ++ P +R I +VV +A AG + + + S ++
Sbjct: 310 VWDKSPYPVDESTPIVRRIYISDVV---VREARAAAGFLYGLTEMPIEDVVFSNVTVEMA 366
Query: 175 PLPCPQL 181
P P+L
Sbjct: 367 QNPEPEL 373
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V +E C + +D + +K G + AR + +I +R T + SG+ +GSE
Sbjct: 203 DSCEQVRVERCVVSCNDDNICIKAGRGQEAASKARSARDIVIRDC--TPNSGSGITLGSE 260
Query: 72 MSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI FN R K + RGG I +I +R++++ V+ P+ I
Sbjct: 261 TSGGIERVLIEHNRFNGTGVGFRIKSARNRGGFIRDIKVRHLQLVDVRFPVMI 313
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
+SGGI N R K RGG +ENIT I ++ + I
Sbjct: 946 ISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRM 1005
Query: 117 HPDEGRDPKALPKIRGISFVNV 138
P L +R I F N+
Sbjct: 1006 VPPLSPAHYPLTCLRNIHFKNI 1027
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN-------- 78
G+D +AVK G + G PS NI++RR + V IGSEM+GG+ +
Sbjct: 295 GDDCIAVKSGKIYMGSTYKCPSKNISIRRCC-MRDGHGSVTIGSEMAGGVKDLTVKDCMF 353
Query: 79 ------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIG----RGSNSHPDEGRDPKA 126
R K +GRG + ++ I +I+M+ V P I + H + R +A
Sbjct: 354 LHTDRGLRIKTRRGRGKDAVVDKIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEA 413
Query: 127 LPKIRGISFVNVVSVNTIKA 146
LP F+ + I+A
Sbjct: 414 LPVDDKTPFIKSLCFRDIEA 433
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR-PSSNITMRRVSGTTPTYSGVGIGS 70
D S NV I +CYI+ G+D +A+K G ++ R P NI + + GV IGS
Sbjct: 191 DSSRNVYITNCYIDVGDDCIAIKAGRED---SLYRTPCENIVIANCL-MRHGHGGVVIGS 246
Query: 71 EMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI------ 110
E SGGI R K +GRGG +E++ I ME+V P +
Sbjct: 247 ETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPFVLNMYYDT 306
Query: 111 GRGSNSHPDEGRDP----KALPKIRGISFVNVVS 140
G G +P +A P R +SF ++ +
Sbjct: 307 GGGVIDERAHDLEPHPVSEATPSFRRLSFSHITA 340
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGW-NHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEM 72
S++V IE I++G+D +A+K G N G PS +I +R T G+ IGSE+
Sbjct: 203 SSHVLIEHVTIDTGDDNIAIKSGQPNSPG--GDEPSHDIVIR--DSTFLHGHGLSIGSEV 258
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP 118
+GG++N R K ++ RG +++ R +KME V PI I P
Sbjct: 259 AGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYRDLKMEDVNTPILISEFYPKIP 318
Query: 119 DE-GRDP--KALPKIRGISFVNVVSVNTIKAPVRAGI 152
D P + P+ I+ N+ + +A + G+
Sbjct: 319 DVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGL 355
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 26/119 (21%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S NV IEDC + G+D V+VK G + + P+ N+ MR + + +GSE
Sbjct: 264 EMSQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCR-IKNGHQLMAVGSE 322
Query: 72 MSGGIFN-------------------------ARTKIDKGRGGNIENITIRYIKMERVK 105
+SGGI N K ++ RGG ++NI +R + +++
Sbjct: 323 LSGGIENIFVDNCHFVGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 35/161 (21%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
+ I++C ++G+D +A+K G N G + PS NI + + + GV IGSE+SGG+
Sbjct: 242 MIIKNCLFDNGDDCIAIKSGRNADGRRINVPSENIVIEN-NEMKDGHGGVTIGSEISGGV 300
Query: 77 FNA----------------RTKIDKGRGGNIENI-----TIRYIKMERVKIPIRIGRGSN 115
N R K + RGG ++NI ++ +K E + I +
Sbjct: 301 KNVFAEGNLMDSPNLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEY----- 355
Query: 116 SHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLA 156
+EG + P +RGI + S A R GI VLA
Sbjct: 356 ---EEGDAGEFKPVVRGIEVDELKS-----AGGRYGIRVLA 388
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TN+ + D + + G+D + +K G + G P+SNI + + G +GSEMSG
Sbjct: 287 TNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCV-CYHGHGGFVVGSEMSG 345
Query: 75 GIFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
G+ N R K +GRGG +ENI I+ I M +
Sbjct: 346 GVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMNDI 389
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I D +I G+D + +K G + G P+ N+T+ + + + GV IGSE+SG
Sbjct: 248 NVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLS-GHGGVVIGSEVSGS 306
Query: 76 I---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKI-PIRIGRGSNSHPDE 120
I F+ R K +GRGG +E I + + M+ +++ I + + + E
Sbjct: 307 IRKVTISNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYDKNTKE 366
Query: 121 GRDPKALPKIRGISFVNV 138
G + P R I NV
Sbjct: 367 GPVTEETPAFRNIHISNV 384
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIA 43
D TN IEDCYI SG+D VAVK GW+ YGIA
Sbjct: 241 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 272
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G P NIT+ + GV IGSEMSGG+ N
Sbjct: 189 ISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAHGHGGVVIGSEMSGGVRN 245
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 246 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 288
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I + I+ G+D V +K G + G + RP NIT+ + V IGSEMSGG
Sbjct: 226 NVQILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENITITNCV-MLKGHGAVTIGSEMSGG 284
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR---GSNSHP 118
+ N R K +GRGG +E + + M+ V + G++
Sbjct: 285 VRNVVVSNCVFQGTDVGIRVKSQRGRGGIVEGFVVSNVVMQDVASAFTLTSFYAGTDKPG 344
Query: 119 DEGRDPKALPKIRGISFVNVVS 140
D + P++R F N+ +
Sbjct: 345 DLFPVGEGTPRLRDFRFSNITA 366
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 12 DLSTNVCIEDCYIESGN--DLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIG 69
D ++N + D +I +G+ D VA+K G +++G PS NI + V T + +G
Sbjct: 392 DSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKANVPSKNIRVEHV--TILGGHALSVG 449
Query: 70 SEMSGGIFN-------------------ARTKIDKGRGGNIENITIRYIK 100
SEMSGG+ N AR K +GRGG ++ IT + I+
Sbjct: 450 SEMSGGVSNIIFSDITFDGRNNKFGVGSARVKTMRGRGGVVDQITFQNIR 499
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 27/153 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I C G+D +AVK G G PSSNI +R+ + + +GSEM+ G
Sbjct: 281 DVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCC-MRDGHGSITLGSEMAAG 339
Query: 76 IFN--------------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
I N R K +GRG + I+ I I+M+ V P I PD
Sbjct: 340 IKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDSVLTPFVINSFYFCDPD 399
Query: 120 ------EGRDPKAL----PKIRGISFVNVVSVN 142
+ ++P A+ P+I+ + F N+ + N
Sbjct: 400 GHSEYVQCKEPLAVDERTPQIKELCFRNIQAKN 432
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V I D YI++G+D + +K G + GI + RP+ ++T+ + + V IGSE
Sbjct: 259 DSSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCT-VHHAHGAVVIGSE 317
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR----G 113
+G I + R K +GRGG ++++ ME V I + G
Sbjct: 318 TAGSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMG 377
Query: 114 SNSHPDEGRDPKALPKIRGISFVNV 138
S E + PK R I NV
Sbjct: 378 GESDTKEEPVSERTPKFRNIGISNV 402
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + P+ NI +R G G+
Sbjct: 261 DSSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAENVR 367
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + P+ NI +R G G+
Sbjct: 261 DSSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAENVR 367
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE C + G+D +K G G+ + RP+ N+ + R S + G+ GSE +
Sbjct: 279 SKNVLIEYCTLNCGDDCFTLKSGRGEEGVRIGRPTENVVI-RYSLAQQGHGGITCGSETA 337
Query: 74 GGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKI 106
G I FN R K + RGG EN+ + I+M V +
Sbjct: 338 GNIKNIYAHDCVFNGTWSGIRFKAFRPRGGGTENVLYKRIRMIDVNV 384
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G + P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTEDCKERI--PCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIPI------RIGRGSNSHP 118
R K +GRGG +E+I + I M+ V P G+G
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGKGGKEKR 309
Query: 119 DEGRDP----KALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNSQVF 174
+ P ++ P +R I +VV +A AG + + + S ++
Sbjct: 310 VWDKSPYPVDESTPIVRRIYISDVV---VREARAAAGFLYGLTEMPIEDVVFSNVTVEMA 366
Query: 175 PLPCPQL 181
P P+L
Sbjct: 367 QNPEPEL 373
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSG--TTPTYSGVGIG 69
D S++ +E ++ +G+D + +K G+N G+ + P+ N+ +R GV G
Sbjct: 271 DSSSDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGSGGVVFG 330
Query: 70 SEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
SE SGGI N R K +GRG ENI I ++M+ ++
Sbjct: 331 SETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIR 380
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 31/144 (21%)
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG ++I ++ + M +K + SH
Sbjct: 1 MSGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSH 60
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------------IVLAPSVK--- 160
D+ DP ALP+I+GI++ ++V+ A GI I +A K
Sbjct: 61 ADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQP 120
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V G S V P PC L ++
Sbjct: 121 WTCSDVEGITSGVTPKPCNLLPDQ 144
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNH--YGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
S+ + +E G+D +A+K G A R + ++ +R + GV IGSE
Sbjct: 287 SSEIRVEGVRFTVGDDCIAIKAGKRGPCGEAAHLRETRDVQIRHCL-MERGHGGVVIGSE 345
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K +GRGG++ IT+R ++ME V +
Sbjct: 346 MSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSANAHYHCD 405
Query: 118 PD------EGRDPKAL----PKIRGISFVNV 138
PD + R P AL P+I GI+ ++
Sbjct: 406 PDGHDEWVQSRQPAALDEGTPEIDGIAVEDI 436
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E+ + G+D + +K G + G+ P NI +R + + GV +GSEMSGG
Sbjct: 292 NVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRN-NIVYHGHGGVTVGSEMSGG 350
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
+ N R K +GRGG +ENI I + M +
Sbjct: 351 VKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDI 393
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E + G+D + +K G N G P+ N+ +R + + G +GSEMSGG
Sbjct: 276 NVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCT-VYHAHGGFVVGSEMSGG 334
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
N R K +GRGG +EN+ I I M+ +
Sbjct: 335 AKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDI 377
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT-PTYSGVGIGS 70
D +++V I + I S +D +A+K G N G + PS NI R+S T + GV GS
Sbjct: 294 DSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISNCTFKSGFGVATGS 350
Query: 71 EMSGGIFNAR--------------TKIDKGRGGNIENITIR 97
EMSGG+ N R K +GRG IEN+T+
Sbjct: 351 EMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVE 391
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 36/170 (21%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I + + G+D + +K G + G P+ N+ ++ + + G IGSEMSGG
Sbjct: 298 NVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKN-NTVYHAHGGFVIGSEMSGG 356
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIR------------ 109
+ N R K +GRGG +ENI I I M + IP
Sbjct: 357 VKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINM--INIPTEAIRFNMFYSGNA 414
Query: 110 -IGRGSNSHPDEGRDPKAL------PKIRGISFVNVVSVNTIKAPVRAGI 152
I + + DE RD + + P + I N+++ N+ KA G+
Sbjct: 415 PILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGL 464
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ IE+C ++ +D + +K G + G+ + RP+ N+ +R + G G+
Sbjct: 256 DSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR----KGAGLITC 311
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + + E V+
Sbjct: 312 GSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYMTRVSAENVR 362
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT-PTYSGVGIGS 70
D +++V I + I S +D +A+K G N G + PS NI R+S T + GV GS
Sbjct: 251 DSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISNCTFKSGFGVATGS 307
Query: 71 EMSGGIFNAR--------------TKIDKGRGGNIENITIR 97
EMSGG+ N R K +GRG IEN+T+
Sbjct: 308 EMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVE 348
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E+ + G+D + +K G + G A P+ N+ +R + + G IGSEMSGG
Sbjct: 306 NVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMSGG 364
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
N R K +GRGG +ENI I I M
Sbjct: 365 ARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISM 404
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 28/144 (19%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V I +C ++G+D +++K G + G P N+ + + + G+ +GSEMSGGI
Sbjct: 250 VHIRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIEN-NEFADGHGGIALGSEMSGGI 308
Query: 77 ----------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP-- 118
+ R K + RGG +E++ + M+ V G+ H
Sbjct: 309 RRVLAVNNRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHV-------HGAAVHGTM 361
Query: 119 --DEGRDPKALPKIRGISFVNVVS 140
++GR+ LP+ I+ N+V+
Sbjct: 362 LYEDGRNGSDLPEFHNITIENIVA 385
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STN + C + +D VA+K G N G + RP+ +I R T G+ IGSE
Sbjct: 311 DSSTNSTLYACDFYTEDDSVAIKSGKNPEGNVINRPTKHI--RVFDSVTHFGHGLCIGSE 368
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ + R K K RGG + NI +R I +++ S +
Sbjct: 369 MSGGVEDVRLWDCQMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQMH------SVGY 422
Query: 118 PDEGRDPKALPKIRGISF 135
D+G K P + F
Sbjct: 423 NDDGEGSKVPPILGDCRF 440
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G + P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTEDCKERI--PCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNV + +C + G+D +A+K G + G + R SS I + R + GV IGSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCK--IRSGYGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
+S G+ + R K K RGG IENI + + M
Sbjct: 265 VSAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
NV + + ++G+D + +K G + G RP N+ V G T + G +GSEMS
Sbjct: 291 NVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVV---VDGCTVFAGHGGFVVGSEMS 347
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GG+ N R K +GRGG +ENI I I M +K
Sbjct: 348 GGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIK 393
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G + P NIT+ + GV IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTEDCKERI--PCENITITNCI-MAHGHGGVVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 250 VVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCP 292
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG--- 75
IE C ++G+D +A+ G N G +A P+ NI +R + GV +GS++SGG
Sbjct: 274 IERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCR-MKEGHGGVVVGSQISGGARW 332
Query: 76 IFNARTKIDKG-------------RGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGR 122
IF R +D RGG +EN R I + V R + + +EG
Sbjct: 333 IFAERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVS---RAAVTCDFNYEEGA 389
Query: 123 DPKALPKIRGISFVNVVSVNTIK 145
+ + +P++R + + + N +
Sbjct: 390 NGRFVPRLRNVVIERLRTKNAAR 412
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
ST V IE+ +G+D V +K G + G + RPS+ + +R G+ +GSEMS
Sbjct: 267 STRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVR--GNDMGGEDGIALGSEMS 324
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKME 102
GG+ + R K + RGG +E + +R + +E
Sbjct: 325 GGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVE 367
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N+ I +C I+ G+D +A+K G + + NIT+ + + V +GSEMS
Sbjct: 195 NLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT-MVHGHGAVVLGSEMSRN 252
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHP--- 118
I N R K +GRGG +ENIT+ I ME V P I P
Sbjct: 253 IRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGPKGK 312
Query: 119 -----DEGRDP--KALPKIRGISFVNVVS 140
D+ P K P R I F N+V+
Sbjct: 313 EKYVWDKNPYPITKETPCFRSIHFSNIVA 341
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ IE+C ++ +D + +K G + G+ + RP+ N+ +R + G G+
Sbjct: 256 DSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR----KGAGLITC 311
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + + E V+
Sbjct: 312 GSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYMTRVSAENVR 362
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D N+ I++CY +G+D +A+K G N G + P NI ++ + + G+ IGSE
Sbjct: 256 DSCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQN-NYMKDGHGGITIGSE 314
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
+SG + N R K + RGG IENI + ++ + I I +
Sbjct: 315 ISGSVRNVFADHNVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFI---VD 371
Query: 116 SHPDEGRDPKALPKIRGISFVNVVS 140
+EG + P +R I N+ S
Sbjct: 372 MDYEEGDAGEYTPIVRNIFVENLES 396
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 243 SNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCT-MVHGHGGVVLGSEMSG 299
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG IE+I + I ME V P
Sbjct: 300 DIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICP 346
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 30/164 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S++V +++ IE +D + +K G + G+ + RP+ N+ + V+ +G+ GSE
Sbjct: 222 DSSSDVLVQNADIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVT-VRDGAAGITFGSE 280
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
SGGI + K RGG +E+I+I I M V + N
Sbjct: 281 TSGGIRHVEAYRIHVLAPSPIGILFKSAATRGGTVEDISIHDIDMRNVPTAFSVNFNWNP 340
Query: 117 HPDEGRDPKAL--------------PKIRGISFVNVVSVNTIKA 146
+ + P+ L P+ +G+ + + ++ IKA
Sbjct: 341 NYSYAKIPQGLQNVPDYYKVMTQEVPRAQGLPHLKNIRISNIKA 384
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E C + G+D + +K G + G + N+ +R + + G +GSEMSGG
Sbjct: 286 NVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRN-NTVYKGHGGFVVGSEMSGG 344
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
N R K +GRGG +ENI I+ I M
Sbjct: 345 AKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINM 384
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C I+ +D++ +K G + G+ + R + N+ +R + + G G+
Sbjct: 282 DSSTNILIENCTIDCNDDIICLKAGRDADGLRVNRSTENVLIRNCTA----HRGAGLITC 337
Query: 69 GSEMSGGIFNARTKIDKG--------------RGGNIENITIRYIKMERVK 105
GSE SG I N K RGG +EN+ + ++ E V+
Sbjct: 338 GSETSGSIRNILAYDLKAIGTSVVFLLKSAMTRGGTVENVYVTRVEAENVR 388
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E+ + G+D + +K G + G A P+ N+ +R + + G IGSEMSGG
Sbjct: 299 NVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMSGG 357
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
N R K +GRGG +ENI I I M
Sbjct: 358 ARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISM 397
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTPAFRRIHFSNITARN 336
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + P+ N+ +R G G+
Sbjct: 261 DSSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAENVR 367
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S + IE+C + G+D V +K G N + PS NI +R ++ +GIGSE
Sbjct: 262 EMSRDFLIENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCK-ILAGHTLLGIGSE 320
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYI 99
+SGGI N K + RGG +ENI + I
Sbjct: 321 LSGGIRNIFMHHCDVLGSVRCLFFIKTNCRRGGFVENIHLEDI 363
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + +C+ ++G+D + +K G + G N+ ++ + + G IGSEMSGG
Sbjct: 299 NVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKN-NTVLHGHGGFVIGSEMSGG 357
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +ENI I I M + IP
Sbjct: 358 VRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIP 401
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 192 SNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCT-MVHGHGGVVLGSEMSG 248
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG IE+I + I ME V P
Sbjct: 249 DIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICP 295
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----KALP------KIRGISFVNVVSVN 142
++P KA P R I F N+ + N
Sbjct: 305 KEPYVWEKKAYPIDERTSAFRRIHFSNITARN 336
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ + N+ IE+ +G+D VA+K G ++ G ARPS NI +R GV +GSE
Sbjct: 255 EFTRNLLIENIEFNNGDDNVAIKCGRDNDGWTTARPSENIIIRNCK--FKGLHGVVLGSE 312
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
MS G+ N K + RGG I NI + + V+ + ++
Sbjct: 313 MSAGVQNVFIENCTYGGYCKRGIYIKTNPDRGGFIRNIYVNNCRFGEVE---DLFYATSM 369
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVK 160
+ EG D ++ I +V T + A +++ +VK
Sbjct: 370 YAGEGMDNTHFTEVHDIYVKDV----TCQKASAAALVLQGTTVK 409
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V I+ C ++ G+D +A+K G G+A +P+++I + + + G IGSE + GI
Sbjct: 223 VTIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECT-VKSAHGGAVIGSETAAGI 281
Query: 77 FNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRI 110
+ R K +GRGG I N+ ++M+ P+ +
Sbjct: 282 RDVRVHDCLFDGTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTL 329
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR 46
D S NV IEDC+I SG+D +AVK GW+ YGI +
Sbjct: 492 DSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGK 526
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGV 66
D NV IEDCYI SG+D +AVK GW+ YGI R G + Y +
Sbjct: 240 DSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGAWEGEAIGRGEWGGSEEYRAI 294
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C I+ G+D +A+K G + P NIT+ + + V +GSEMSG
Sbjct: 192 SNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSG 248
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG IE+I + I ME V P
Sbjct: 249 DIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVICP 295
>gi|262408433|ref|ZP_06084980.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|294643092|ref|ZP_06720926.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808960|ref|ZP_06767684.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508645|ref|ZP_08788271.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353985|gb|EEZ03078.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|292641551|gb|EFF59735.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294443841|gb|EFG12584.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455055|gb|EEO51472.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 487
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 23/124 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE SG I N R K RGG +ENI + ++ + V + +
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVSNVLEVDL-- 364
Query: 115 NSHP 118
N HP
Sbjct: 365 NWHP 368
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C I+ G+D +A+K G + P NIT+ + + V +GSEMSG
Sbjct: 192 SNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSG 248
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG IE+I I I ME V P
Sbjct: 249 DIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVICP 295
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 23/124 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE SG I N R K RGG +ENI + ++ + V + +
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVSNVLEVDL-- 364
Query: 115 NSHP 118
N HP
Sbjct: 365 NWHP 368
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I +CYI+ G+D V +K G + + P NI + + G+ IGSEMSGG+ N
Sbjct: 193 ISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCI-MAHGHGGIVIGSEMSGGVRN 249
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
R K +GRGG +E+I + I M+ V P
Sbjct: 250 VVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVICP 292
>gi|237721252|ref|ZP_04551733.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449048|gb|EEO54839.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 487
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 23/124 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE SG I N R K RGG +ENI + ++ + V + +
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVEADSVSNVLEVDL-- 364
Query: 115 NSHP 118
N HP
Sbjct: 365 NWHP 368
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V IE C + +D + +K G AR + +I +R T SG+ +GSE
Sbjct: 203 DSCEQVRIERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRGC--TLNKGSGITLGSE 260
Query: 72 MSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI FN R K + RGG I +IT++ +++ V+ P+ I
Sbjct: 261 TSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLI 313
>gi|255622277|ref|XP_002540267.1| hypothetical protein RCOM_1982630 [Ricinus communis]
gi|223497416|gb|EEF22116.1| hypothetical protein RCOM_1982630 [Ricinus communis]
Length = 197
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 13 LSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEM 72
+S NV IEDC + G+D ++VK G + + PS NI MR + + IGSE+
Sbjct: 1 MSQNVLIEDCVFDQGDDAISVKSGRDQDAWRLGVPSKNIVMRNCR-IRNGHQLMAIGSEL 59
Query: 73 SGGIFNA 79
S GI N
Sbjct: 60 SAGIENV 66
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 30/144 (20%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S N+ I D ++G+D +A+K G N G + RP+ NI R G+ IGSE
Sbjct: 319 DSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGSE 376
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ + K RGG I +TI ++R +H
Sbjct: 377 QSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFM----------AH 426
Query: 118 P----DEGRDPKALPKIRGISFVN 137
P +G+ + LP I I N
Sbjct: 427 PVAYNADGQAAQQLPIISDILVKN 450
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 30/144 (20%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S N+ I D ++G+D +A+K G N G + RP+ NI R G+ IGSE
Sbjct: 319 DSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGSE 376
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGG+ + K RGG I +TI ++R +H
Sbjct: 377 QSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFM----------AH 426
Query: 118 P----DEGRDPKALPKIRGISFVN 137
P +G+ + LP I I N
Sbjct: 427 PVAYNADGQAAQQLPIISDILVKN 450
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C +G+D +A+K G ++ + +P+ N+ +R S + +GV IGSE++GG
Sbjct: 258 NVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEIAGG 316
Query: 76 IFNART--------------KIDKGRGGNIENITIRYIKMERVKIPI 108
+ N K + RG I+++ +R ++ + V+ +
Sbjct: 317 VRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL 363
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
I D + G+D + +K G + G A+A P+ +T+R + G IGSEMSG + N
Sbjct: 269 IYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQ-VFHGHGGFVIGSEMSGDVRN 327
Query: 79 --------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDP 124
R K +GRGG +E I IR + M+ + I S + DP
Sbjct: 328 IAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYSGKNNTDDP 387
Query: 125 KALPK 129
A+ +
Sbjct: 388 VAVTE 392
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C +G+D +A+K G ++ + +P+ N+ +R S + +GV IGSE++GG
Sbjct: 258 NVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEIAGG 316
Query: 76 IFNART--------------KIDKGRGGNIENITIRYIKMERVKIPI 108
+ N K + RG I+++ +R ++ + V+ +
Sbjct: 317 VRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL 363
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S NV I +C ++G+D +A+K G N G + S NI + + GV +GSE
Sbjct: 269 EYSKNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCI-MKDGHGGVVMGSE 327
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
+S G+ N R K + RGG +EN+ ++ I++ +VK
Sbjct: 328 ISAGVRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVK 377
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 33/196 (16%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSG----TTPTYSGVGIGS 70
T+V + + G+D +AVK G G RR+ + G+ +GS
Sbjct: 277 TDVTLAGIHFSVGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMVLGS 336
Query: 71 EMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
EMSG I + R K +GRGG + + + M+ V P+ I
Sbjct: 337 EMSGDITDVTVTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYC 396
Query: 117 HPDEGRDP-----------KALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQF 165
PD GR P + PKI I+F +V++ + PV A ++ P
Sbjct: 397 DPD-GRSPEVQSRSPAPVDETTPKIHDITFSDVIATDV---PVCAVAVLGLPEAPVTGVR 452
Query: 166 VSGFNSQVFPLPCPQL 181
+ F + + P PQ+
Sbjct: 453 LKNFRASLDPSAPPQV 468
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C I+ G+D +A+K G ++ NIT+ + GV +GSEMSG
Sbjct: 190 NVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQ-MLHGHGGVVLGSEMSGD 246
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG IE+I + + M+ V P + +G
Sbjct: 247 IRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCGPKGK 306
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGII 153
+ D+ P + P+ R I FVN+ + N A AG I
Sbjct: 307 EKYVWDKNPYPISEETPQFRRIHFVNISARNVHAA---AGFI 345
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ IE+C ++ +D + +K G + G+ + RP+ N+ +R + G G+
Sbjct: 256 DSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR----KGAGLITC 311
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
GSE SG I N R K RGG IENI + + E +
Sbjct: 312 GSETSGSIRNILGYDLKAVGTSTVLRLKSAMNRGGTIENIYMTRVSAENI 361
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C I+ G+D +A+K G ++ NIT+ + GV +GSEMSG
Sbjct: 190 NVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQ-MLHGHGGVVLGSEMSGD 246
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG IE+I + + M+ V P + +G
Sbjct: 247 IRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCGPKGK 306
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVNTIKAPVRAGII 153
+ D+ P + P+ R I FVN+ + N A AG I
Sbjct: 307 EKYVWDKNPYPISEETPQFRRIHFVNISARNVHAA---AGFI 345
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
GSE SG I N R K RGG +ENI + ++ + V
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|255577475|ref|XP_002529616.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223530901|gb|EEF32761.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 474
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNH-----------YGIAMARPSSNITMRRVSGTTPT 62
+ N+ I DC I +G+D +++ G + +GI++ S + VSG T
Sbjct: 286 TQNIQITDCVIGTGDDCISIVSGSQNVQAMNITCGPGHGISIGSLGSGNSKAHVSGVTIN 345
Query: 63 YSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGR 122
G+++SG R K +G GN NI + IKM+ V PI I + +
Sbjct: 346 ------GAKLSGTTNGVRIKTWQGGSGNASNIKFQNIKMDNVSNPIIIDQNYCDQDKPCK 399
Query: 123 DPKALPKIRGISFVNV 138
+ K+ +++ + + N+
Sbjct: 400 EQKSAVQVKDVVYKNI 415
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
GSE SG I N R K RGG +ENI + ++ + V
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
GSE SG I N R K RGG +ENI + ++ + V
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 21/110 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ +E+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
GSE SG I N R K RGG +ENI + ++ + V
Sbjct: 307 GSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVEADSV 356
>gi|367067221|gb|AEX12820.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067223|gb|AEX12821.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067225|gb|AEX12822.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067227|gb|AEX12823.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067229|gb|AEX12824.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067231|gb|AEX12825.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067233|gb|AEX12826.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067235|gb|AEX12827.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067237|gb|AEX12828.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067239|gb|AEX12829.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067241|gb|AEX12830.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067243|gb|AEX12831.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067245|gb|AEX12832.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067247|gb|AEX12833.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067249|gb|AEX12834.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067251|gb|AEX12835.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067253|gb|AEX12836.1| hypothetical protein 2_9627_01 [Pinus taeda]
Length = 131
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 102 ERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI--------- 152
E +K + SHPD +P ALP + IS+ N+V+ N A GI
Sbjct: 1 ENMKWAFTMTGSYGSHPDNKYNPDALPVVERISYSNIVATNVSVAGKLEGIAKAPFKDIC 60
Query: 153 -----IVLAPSVK---WQSQFVSGFNSQVFPLPCPQLQNK 184
I +A K W ++ G ++ V+P PC L+ K
Sbjct: 61 LSNVTITMAAKAKKYPWNCTYIHGLSNTVYPQPCSLLEEK 100
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV +E+ + G+D + +K G + G P NI ++ + + GV +GSEMSGG
Sbjct: 294 NVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKN-NIVYHGHGGVTVGSEMSGG 352
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
+ N R K ++GRGG +ENI I I M +
Sbjct: 353 VKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDI 395
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
++S N+ IED + +G+D VA+K G ++ G A P+ NI +R V IGSE
Sbjct: 259 EMSRNILIEDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCH--FKGLHAVVIGSE 316
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS 116
MS G+ N K + RGG + ++ + K + V+ + ++
Sbjct: 317 MSAGVRNVFVENCDYAGYCKRGVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYV---TSR 373
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNS 171
+ EG++ I + +V+ +S VRA +VL + Q VS FN+
Sbjct: 374 YAGEGQESMHFSTIEHL-YVDGLSARK----VRAAALVLQGTSAKPVQHVS-FNA 422
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE C + + +D +K G G+ + RP++N+ +R S T G+ GSE +
Sbjct: 262 SKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRH-SLATNGPGGITCGSETA 320
Query: 74 GGIFN--ARTKIDKG------------RGGNIENITIRYIKMERVK 105
G I N A + KG RGG EN+ I+M VK
Sbjct: 321 GNIKNIYAHDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVK 366
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+ V + +C + G+D + VK G + G+ + +P+++I + + GV +GSE
Sbjct: 209 DSSSYVRVHNCELSCGDDCIVVKSGRDGDGLRVNQPAAHIEIDHC--IIHSGYGVTLGSE 266
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
+S GI + R K RGG I+N+ +++M V+ P
Sbjct: 267 VSAGISDVHIHDMIFENTDCGFRMKSSADRGGVIKNVVAEHLEMHNVQFPF 317
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + V +GSEMSG
Sbjct: 191 NVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGD 247
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG IE+I + I M+ V P + +G
Sbjct: 248 IRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGK 307
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVNTIKA 146
+ D+ P + P R I F N+ + N A
Sbjct: 308 EKYVWDKNPYPITEETPHFRRIHFANISARNVHAA 342
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 18/101 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT-PTYSGVGIGS 70
D +++V I + I S +D +A+K G N G + PS NI R+S + GV GS
Sbjct: 294 DSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISNCIFKSGFGVATGS 350
Query: 71 EMSGGIFNAR--------------TKIDKGRGGNIENITIR 97
EMSGG+ N R K +GRG IEN+T+
Sbjct: 351 EMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVE 391
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + V +GSEMSG
Sbjct: 191 NVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGD 247
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG IE+I + I M+ V P + +G
Sbjct: 248 IRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGK 307
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVNTIKA 146
+ D+ P + P R I F N+ + N A
Sbjct: 308 EKYVWDKNPYPITEETPHFRRIHFANISARNVHAA 342
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I C + G+D +A+K G RPS IT+RR + GV IGSE+S G
Sbjct: 280 NVEIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCL-MEEGHGGVVIGSEISCG 338
Query: 76 IFNA--------------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ + R K +GRG ++ + ++KME+V I + PD
Sbjct: 339 VQDVLVQNCLFRRTDRGFRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVINMFYHCDPD 398
Query: 120 EGRD----PKALPKIRGISFVNVVSVNTIKAPVRAGIIVL 155
D +ALP V ++++ I A AG V
Sbjct: 399 GHSDLVQCKEALPVGAETPAVQNITLSDICADEIAGSAVF 438
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + V +GSEMSG
Sbjct: 191 NVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGD 247
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG IE+I + I M+ V P + +G
Sbjct: 248 IRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGK 307
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVNTIKA 146
+ D+ P + P R I F N+ + N A
Sbjct: 308 EKYVWDKNPYPITEETPHFRRIHFANISARNVHAA 342
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V IEDC+ +G+D +A+ G N G + P N+ +R + G+ IGS++SG
Sbjct: 273 HVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCR-MADGHGGLTIGSQISGH 331
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K + RGG +E + R +++ +V+ R + + +
Sbjct: 332 VRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVR---RAVVTVDFNYE 388
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIKA 146
EG + + P +R + NV S + +A
Sbjct: 389 EGANGRFKPVLRDVLIENVRSGRSRRA 415
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G ARP N+ V G T + G +GSEMS
Sbjct: 287 NALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVV---VDGCTVFKGHGGFVVGSEMS 343
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI IR + M
Sbjct: 344 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSM 385
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + V +GSEMSG
Sbjct: 191 NVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH-MLHGHGAVVLGSEMSGD 247
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG IE+I + I M+ V P + +G
Sbjct: 248 IRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPKGK 307
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVNTIKA 146
+ D+ P + P R I F N+ + N A
Sbjct: 308 EKYVWDKNPYPITEETPHFRRIHFANISARNVHAA 342
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ +E+C ++ +D + +K G + G+ + P+ N+ +R G G+
Sbjct: 261 DSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 367
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V +E+C I +G+D VA+K G + G + S NI +RR + ++G+ +GSE+SGG
Sbjct: 248 DVLVENCVISAGDDAVALKTGRDADGWRVGVASENIVVRR-NVLASRFNGICVGSEVSGG 306
Query: 76 IFN 78
+ N
Sbjct: 307 VDN 309
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ +E+C ++ +D + +K G + G+ + P+ N+ +R G G+
Sbjct: 261 DSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 367
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ +E+C ++ +D + +K G + G+ + P+ N+ +R G G+
Sbjct: 261 DSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 367
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
Length = 1095
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYI 99
+SG I N R K RGG +ENIT I
Sbjct: 946 ISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYI 99
+SG I N R K RGG +ENIT I
Sbjct: 946 ISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NV I D +I+ G+D++A+K G++ G P+ N+ V + IGSE
Sbjct: 138 DSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVL---VENSVFINENFAIGSE 194
Query: 72 MSGGI 76
MSGG+
Sbjct: 195 MSGGV 199
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ +E+C ++ +D + +K G + G+ + P+ N+ +R G G+
Sbjct: 261 DSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR----KGAGLITC 316
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 317 GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 367
>gi|423312659|ref|ZP_17290596.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
gi|392687393|gb|EIY80686.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
Length = 849
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V IE C ++ +D +K G G+ + RP+SN+ +R+ S G+ G+E
Sbjct: 248 DSSNDVLIEYCSLDCQDDCYTMKSGRGEDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIK 100
++GG+ N R K + RGG +ENI + ++
Sbjct: 307 IAGGVRNVYMHDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 35/157 (22%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M R G G+ I
Sbjct: 286 NVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMERGHG------GLVI 339
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSEMSGG+ N R K +GRGG++ N+T+R + ++ V+ +
Sbjct: 340 GSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTALSANAHY 399
Query: 115 NSHPD------EGRDPKALPKIRGISFVNVVSVNTIK 145
+ D + RDP P G F++ ++V ++
Sbjct: 400 HCDADGHDGWVQSRDPA--PVDYGTPFIDGITVEDVE 434
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
Length = 1095
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYI 99
+SG I N R K RGG +ENIT I
Sbjct: 946 ISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 887 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSE 945
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYI 99
+SG I N R K RGG +ENIT I
Sbjct: 946 ISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 988
>gi|423315477|ref|ZP_17293405.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
gi|392679280|gb|EIY72666.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
Length = 494
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ NI +R G G+
Sbjct: 253 DSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIAR----KGAGLITC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + + + V+
Sbjct: 309 GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P NI +R + + G IGSEMSGG
Sbjct: 298 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGGFVIGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 357 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 387
>gi|319643143|ref|ZP_07997773.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520565|ref|ZP_08799952.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835085|gb|EET15394.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385221|gb|EFV66170.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 494
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ NI +R G G+
Sbjct: 253 DSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIAR----KGAGLITC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + + + V+
Sbjct: 309 GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
D S+++ IE+ YI+ +D + +K G + G+ + RP+ + +R V IGS
Sbjct: 248 VDSSSDILIENAYIDCNDDNICLKAGRDADGLRVNRPTERVVIRNCIAAKGG-GLVTIGS 306
Query: 71 EMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
E SGGI N R K RGG +E+I + K E VK
Sbjct: 307 ETSGGIRNVLAYDLESKGTSTMLRLKSAMNRGGTVEHIYVTRCKGEDVK 355
>gi|294777281|ref|ZP_06742736.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448901|gb|EFG17446.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 494
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ NI +R G G+
Sbjct: 253 DSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIAR----KGAGLITC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + + + V+
Sbjct: 309 GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ NI +R G G+
Sbjct: 253 DSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIAR----KGAGLITC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + + + V+
Sbjct: 309 GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVR 359
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C +G+D VA+K G N+ G PS NI +R ++GV +GSE+SG
Sbjct: 770 NVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCI-MRDGHAGVAVGSEISGS 828
Query: 76 IFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
++ R K + RGG ++ R I++ K
Sbjct: 829 CYDVWVRDCVMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECK 874
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + + G+D V +K G N G P+ N+ + + + G +GSEMSGG
Sbjct: 275 NVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCT-VFHGHGGFVVGSEMSGG 333
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
+ + R K ++ RGG++ +I I+ + M
Sbjct: 334 VHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYM 373
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G ARP N+ V G T + G +GSEMS
Sbjct: 288 NALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVI---VDGCTVFKGHGGFVVGSEMS 344
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI +R + M
Sbjct: 345 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSM 386
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ +E+C ++ +D + +K G + G+ + P+ N+ +R G G+
Sbjct: 245 DSSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR----KGAGLITC 300
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG IENI + +K E V+
Sbjct: 301 GSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVR 351
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P NI +R + + G IGSEMSGG
Sbjct: 292 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGGFVIGSEMSGG 350
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 351 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 381
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 31/146 (21%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVS-GTTPTYSGVG---IGSEMSG 74
+E+ Y+ + +D V +K G + +GI +A P+ ++ +R ++ G +G G +GSEMSG
Sbjct: 600 VENVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITCGDRRDDAGRGGFAVGSEMSG 659
Query: 75 GIFNAR----------------TKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS-NSH 117
G+ N K GRGG I ++T E ++ P + + N H
Sbjct: 660 GVRNVTFRDSVLGAGPQSRGIDVKTSVGRGGYIIDVT-----FENIRAPSPFPKANVNVH 714
Query: 118 PDEGRDPKA-----LPKIRGISFVNV 138
DP +P I + F NV
Sbjct: 715 SALRDDPDVPGDDLVPVIGNLRFANV 740
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V ++ I+ +D + +K G + G+ + RP+ N+ +R S + V GSE
Sbjct: 217 DSSHDVLVQHADIDVNDDALCLKAGRDSDGLRVNRPTYNVVLRD-SLIRTGAAAVTFGSE 275
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN- 115
SGG N K K RGG EN+ + + ++ VK PI++ N
Sbjct: 276 TSGGFRNIEAYNLTALRGVTNGVLIKSAKVRGGFGENLRVHDLHLDGVKTPIKVTLNWNP 335
Query: 116 -----SHPDEGRDPKALP 128
S P G DPK +P
Sbjct: 336 AYSYTSLP-AGTDPKTVP 352
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
+NV I +C I+ G+D +A+K G + P NIT+ + + V +GSEMSG
Sbjct: 215 SNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCT-MVHGHGAVVLGSEMSG 271
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG +E+I + I ME V P
Sbjct: 272 DIRNVTISNCVFKQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDVICP 318
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N +E C ++G+D + +K G + G P+ N ++ + G IGSEMSGG
Sbjct: 512 NGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCK-VYHAHGGFVIGSEMSGG 570
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
+ N R K +GRGG +E+I + + M +
Sbjct: 571 VRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEI 613
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE C + SG+D +K G GI + +P+ N+ +R + G+ GSE +
Sbjct: 278 SRNVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENVVIRHCLARE-GHGGITCGSETA 336
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
G I N R K + R G ENI I+M
Sbjct: 337 GMIRNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYENIRM 378
>gi|265754967|ref|ZP_06089881.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234578|gb|EEZ20157.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 849
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V IE C ++ +D +K G G+ + RP+SN+ +R+ S G+ G+E
Sbjct: 248 DSSNDVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIK 100
++GG+ N R K + RGG +ENI + ++
Sbjct: 307 IAGGVRNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|212693767|ref|ZP_03301895.1| hypothetical protein BACDOR_03288 [Bacteroides dorei DSM 17855]
gi|423232657|ref|ZP_17219057.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|423242091|ref|ZP_17223201.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
gi|423247347|ref|ZP_17228397.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|212663656|gb|EEB24230.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|392623750|gb|EIY17852.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|392632755|gb|EIY26712.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|392639835|gb|EIY33643.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
Length = 849
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V IE C ++ +D +K G G+ + RP+SN+ +R+ S G+ G+E
Sbjct: 248 DSSNDVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIK 100
++GG+ N R K + RGG +ENI + ++
Sbjct: 307 IAGGVRNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE + G+D + +K G + G +P+ N+ +R + + G +GSEMSGG
Sbjct: 286 NVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRN-NVVYHAHGGFVVGSEMSGG 344
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
N R K +GRGG +E+I I I M + IP
Sbjct: 345 AKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINM--IDIP 388
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA------- 79
G+D +A+K G + M RPS NI +R + GV +GSEMSGGI +
Sbjct: 290 GDDCIAIKSGKISVPVDMRRPSENIIIRNCL-MEYGHGGVVLGSEMSGGIKHVYVERCFF 348
Query: 80 -------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
R K +GRG I+ I I+ IKM+ V P + PD
Sbjct: 349 RNTDRGLRIKTRRGRGNTAVIDEIYIKNIKMDGVLTPFTLNCFYFCDPD 397
>gi|345513296|ref|ZP_08792818.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437084|gb|EEO47161.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 849
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V IE C ++ +D +K G G+ + RP+SN+ +R+ S G+ G+E
Sbjct: 248 DSSNDVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIK 100
++GG+ N R K + RGG +ENI + ++
Sbjct: 307 IAGGVRNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYVERVR 349
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P N+ +R + + G IGSEMSGG
Sbjct: 299 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGG 357
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 358 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 388
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ NI +R G G+
Sbjct: 253 DSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIAR----KGAGLITC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + + + V+
Sbjct: 309 GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNVR 359
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+ + G+D + +K G + G P NI ++ + + GV +GSEMSGG
Sbjct: 290 NVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKN-NIVYHGHGGVTVGSEMSGG 348
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
+ N R K +GRGG +ENI I + M +
Sbjct: 349 VKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDI 391
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ NI +R G G+
Sbjct: 253 DSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIAR----KGAGLITC 308
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + + + V+
Sbjct: 309 GSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNVR 359
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S V I +C +G+D +A+K G N G + PS NI + + GV +GSE
Sbjct: 286 EYSKYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCD-MKDGHGGVVMGSE 344
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVK 105
+S G+ N R K + RGG +EN+ ++ I++ +VK
Sbjct: 345 ISAGVRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVK 394
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V +E C + +D + +K G AR + +I +R T SG+ +GSE
Sbjct: 203 DSCEQVRVERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRGC--TLNKGSGITLGSE 260
Query: 72 MSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI FN R K + RGG I +IT++ + + V+ P+ I
Sbjct: 261 TSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVRFPVLI 313
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V IE C + +D + +K G AR + I +R SG+ +GSE
Sbjct: 203 DSCEQVRIERCTVSCNDDNICIKAGRGREAAPKARTARAIVIREC--VLNKGSGITLGSE 260
Query: 72 MSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI FN R K + RGG I +IT+R + ++ V+ P+ I
Sbjct: 261 TSGGIEHVLIENNRFNGTGVGFRIKSARNRGGFIRHITVRNLLLQNVRFPVLI 313
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P N+ +R + + G IGSEMSGG
Sbjct: 298 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 357 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 387
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I+D Y ++G+D +A+K G + G + +P+ N + + GV IGSE++GG
Sbjct: 273 NVWIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCE-MKDGHGGVVIGSEIAGG 331
Query: 76 IFN----------------ARTKIDKGRGGNIENI 94
N R K RGG IEN+
Sbjct: 332 AKNIYAIGNVMDSKNLERALRIKTSSNRGGIIENV 366
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P N+ +R + + G IGSEMSGG
Sbjct: 298 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 357 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 387
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P N+ +R + + G IGSEMSGG
Sbjct: 298 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 357 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 387
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+ ++G+D + +K G + G P N+ +R + + G IGSEMSGG
Sbjct: 292 NVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGGFVIGSEMSGG 350
Query: 76 IFNA--------------RTKIDKGRGGNIE 92
+ N R K +GRGG +E
Sbjct: 351 VKNVYVSECSFIGTDVGLRFKSARGRGGVVE 381
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + + ++G+D + +K G N G P N+ ++ + + G +GSEMSGG
Sbjct: 296 NVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKN-NTVLHGHGGFVVGSEMSGG 354
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +EN+ + I M + IP
Sbjct: 355 VRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINM--INIP 398
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG- 75
+ IE C ++G+D +AV G N G +A P+ NI +R + GV +GS++SGG
Sbjct: 290 MLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRDCR-MKEGHGGVVVGSQISGGA 348
Query: 76 --IFNARTKIDKG-------------RGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE 120
I+ R +D RGG +E+ R + + +V R + + +E
Sbjct: 349 RHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHFYFRDLTVGQVS---RAAITCDFNYEE 405
Query: 121 GRDPKALPKIRGI 133
G D P +R I
Sbjct: 406 GADGPFKPVLRDI 418
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V +E C + +D + +K G + AR + +I +R T SG+ +GSE
Sbjct: 203 DSCEQVRVERCIVSCNDDNICIKSGRGYEAAQKARTARDIVIRGC--TLNKGSGITLGSE 260
Query: 72 MSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGGI FN R K + RGG I +I ++ +++ V+ P+ I
Sbjct: 261 TSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLRLTDVRFPVLI 313
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S ++ I IE+ +D +++K G + G + RPS NI + + GV +GSE
Sbjct: 270 DSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCH-FAYGHGGVAMGSE 328
Query: 72 MSGGIFNA---------------RTKIDKGRGGNIENITIRYI 99
+SG I N R K RGG +ENIT I
Sbjct: 329 ISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDI 371
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 30/140 (21%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N + + + G+D + K G N G P+ N+ ++ + + G +GSEMSGG
Sbjct: 294 NALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKN-NTVYHAHGGFVVGSEMSGG 352
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-----GSNS 116
+ N R K +GRGG +ENI I I M + IP R G NS
Sbjct: 353 VRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDM--INIPTDAIRFNMFYGGNS 410
Query: 117 --------HPDEGRDPKALP 128
DE RD +P
Sbjct: 411 PVLEEDQDAEDEARDETIVP 430
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR-RVSGTTPTYSGVGIGSEMSGG 75
+ IE C ++G+D V +K G + G + PS I +R + + ++ G+ IGSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 76 IFNA--------------RTKIDKGRGGNIENI 94
+ N R K + RGG +ENI
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENI 339
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D STN+ IE+C ++ +D + +K G + G+ + RP+ N+ +R G G+
Sbjct: 251 DSSTNILIENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIAR----KGAGLLTC 306
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERV 104
GSE SG I N R K RGG +ENI + + + +
Sbjct: 307 GSETSGSIRNVLAHDLTAYGTGTTLRLKSSMNRGGTVENIYMTRVVADSI 356
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR-RVSGTTPTYSGVGIGSEMSGG 75
+ IE C ++G+D V +K G + G + PS I +R + + ++ G+ IGSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 76 IFNA--------------RTKIDKGRGGNIENI 94
+ N R K + RGG +ENI
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENI 339
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR-RVSGTTPTYSGVGIGSEMSGG 75
+ IE C ++G+D V +K G + G + PS I +R + + ++ G+ IGSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 76 IFNA--------------RTKIDKGRGGNIENI 94
+ N R K + RGG +ENI
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENI 339
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR-RVSGTTPTYSGVGIGSEMSGG 75
+ IE C ++G+D V +K G + G + PS I +R + + ++ G+ IGSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 76 IFNA--------------RTKIDKGRGGNIENI 94
+ N R K + RGG +ENI
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENI 339
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNCHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 23/153 (15%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D NV IE+C + +G+D + +K N P NI +R + T + V GS
Sbjct: 234 DGCENVLIENCDLSTGDDAICLKSSMN--------PCRNIVVRGCRADSNT-AAVKFGSS 284
Query: 72 MSGGIFN-------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS-NSH 117
GG + K+ GG +ENITI + M+ V PI + G+ SH
Sbjct: 285 SRGGFLDISITNCYFHDCPMGAIKLQSVDGGRLENITISRVVMKDVGSPIFLRLGNRGSH 344
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
+G + ++ I +VV+ TI+ +A
Sbjct: 345 FGDGPADAPVGTLKNIRISDVVAEVTIENRAKA 377
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR-RVSGTTPTYSGVGIGSEMSGG 75
+ IE C ++G+D V +K G + G + PS I +R + + ++ G+ IGSEMSGG
Sbjct: 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 308
Query: 76 IFNA--------------RTKIDKGRGGNIENI 94
+ N R K + RGG +ENI
Sbjct: 309 VRNVVARNNVYMNVERALRLKTNSRRGGYMENI 341
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR-RVSGTTPTYSGVGIGSEMSGG 75
+ IE C ++G+D V +K G + G + PS I +R + + ++ G+ IGSEMSGG
Sbjct: 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 308
Query: 76 IFNA--------------RTKIDKGRGGNIENI 94
+ N R K + RGG +ENI
Sbjct: 309 VRNVVARNNVYMNVERALRLKTNSRRGGYMENI 341
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE+ + G+D + +K G + G A P+ ++ +R + + G IGSEMSGG
Sbjct: 299 NVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRN-NVVYHAHGGFVIGSEMSGG 357
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
N R K +GRGG +EN+ I M+ +
Sbjct: 358 AKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDI 400
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 25 ESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN------ 78
++G+D + +K G + G P N+ + + + G +GSEMSGG+ N
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 79 --------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI--------GRGSNSHPDEGR 122
R K ++GRGG +ENI I I M + I GRG + + DE +
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQDEKK 429
Query: 123 DPKALPKI 130
+P +
Sbjct: 430 AETTIPPV 437
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 25 ESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN------ 78
++G+D + +K G + G P N+ + + + G +GSEMSGG+ N
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 79 --------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI--------GRGSNSHPDEGR 122
R K ++GRGG +ENI I I M + I GRG + + DE +
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQDEKK 429
Query: 123 DPKALPKI 130
+P +
Sbjct: 430 AETTIPPV 437
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 25 ESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN------ 78
++G+D + +K G + G P N+ + + + G +GSEMSGG+ N
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 79 --------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI--------GRGSNSHPDEGR 122
R K ++GRGG +ENI I I M + I GRG + + DE +
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQDEKK 429
Query: 123 DPKALPKI 130
+P +
Sbjct: 430 AETTIPPV 437
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 25 ESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN------ 78
++G+D + +K G + G P N+ + + + G +GSEMSGG+ N
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 79 --------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI--------GRGSNSHPDEGR 122
R K ++GRGG +ENI I I M + I GRG + + DE +
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQDEKK 429
Query: 123 DPKALPKI 130
+P +
Sbjct: 430 AETTIPPV 437
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C ++ G+D +K G GI + +PS NI +R + G+ GSE +
Sbjct: 272 NVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIVIRYCLAKR-GWGGIVCGSETAAM 330
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG EN+T I+M
Sbjct: 331 IRNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFERIRM 370
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 35/157 (22%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M R G G+ I
Sbjct: 294 NVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMERGHG------GLVI 347
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSEMSGG+ + R K +GRGG++ NIT+R + ++ V +
Sbjct: 348 GSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTALSANAHY 407
Query: 115 NSHPD------EGRDPKALPKIRGISFVNVVSVNTIK 145
+ D + RDP P G F++ ++V ++
Sbjct: 408 HCDADGHDGWVQSRDPA--PVDDGTPFIDGITVEDVE 442
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 25 ESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN------ 78
++G+D + +K G + G P N+ + + + G +GSEMSGG+ N
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDNC 369
Query: 79 --------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI--------GRGSNSHPDEGR 122
R K ++GRGG +ENI I I M + I GRG + + DE +
Sbjct: 370 TFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGRGEDPNQDEKK 429
Query: 123 DPKALPKI 130
+P +
Sbjct: 430 AETTIPPV 437
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 34/142 (23%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
NV I + + G+D + K G N G P+ N+ ++ Y G G IGSEM
Sbjct: 301 NVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVK----NNVVYHGHGGFVIGSEM 356
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKI-PIR-------- 109
SGG+ N R K +GRGG +ENI I I M + PIR
Sbjct: 357 SGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDMIDIPTEPIRFNLFYGGN 416
Query: 110 ---IGRGSNSHPDEGRDPKALP 128
+ G NS P G++ K +P
Sbjct: 417 APLLDDGGNSVP-SGKEAKPVP 437
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 27/151 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I +C+I+ G+D +A+K G +A NIT+ + + V GSEMSG
Sbjct: 191 NVRISNCHIDVGDDCIAIKSGTEDTEERVA--CENITITNCT-MVHGHGAVVFGSEMSGD 247
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIG-------RGS 114
I N R K +GRGG +E++ + I ME V P I RG
Sbjct: 248 IRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYFCGPRGK 307
Query: 115 NSHP-DEGRDP--KALPKIRGISFVNVVSVN 142
+ + D+ P P R + F N+ + N
Sbjct: 308 DQYVWDKNPYPVTAETPMFRRLHFANITARN 338
>gi|383316410|ref|YP_005377252.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379043514|gb|AFC85570.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 784
Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S++V + +I +G+D VA+K G PS +IT+ + G+ IGSE+
Sbjct: 252 SSHVLLAHNWINTGDDNVAIKAG-------TTGPSRDITI--IHNHFYQGHGLSIGSEVQ 302
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G+ + R K D+ RGG + +I+ ++ M V+ P+ + N
Sbjct: 303 SGVSDVHVDDLSLDGTTNGLRIKSDRSRGGLVSDISYAHVCMRHVRWPLVLDTLYNPRA- 361
Query: 120 EGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAP-SVKWQSQFVSGFNSQV 173
EG ALP+ R I F ++ ++ +A R G+ P V WQ V G S +
Sbjct: 362 EG---DALPEFRDIRFSHIHALEGGQALWR-GLGAGHPLRVAWQDVQVDGGRSGI 412
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 59/138 (42%), Gaps = 27/138 (19%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMAR---PSSNITMR--RVSGTTPTYSGVGIGSE 71
V IEDC + G D VAVK G N G + + N+ +R +G T SG+ GSE
Sbjct: 261 VLIEDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFAGGT---SGIAFGSE 317
Query: 72 MSGGI----------------FNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
MSG I + R K + RGG +E I IR + ++ + +
Sbjct: 318 MSGDIRDIYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIRY---VSIHAT 374
Query: 116 SHPDEGRDPKALPKIRGI 133
DEG LP+ R I
Sbjct: 375 MLYDEGWMGSYLPEYRDI 392
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYS---GVGIGS 70
S+N+ I+ + G+D VA+K G A+ P + + ++ T T+ G+ IGS
Sbjct: 212 SSNIVIDHVFSSVGDDNVAIKSG------AINSPGPDAPSKNITITDCTFENGHGLSIGS 265
Query: 71 EMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
E++GG+ N R K ++ RG ++ NI+ + I M VK I I
Sbjct: 266 EIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISFKDIDMVDVKTAILI 319
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
STNV IE+ G+D +A+K G + G + + + N+ +R + IGSEMS
Sbjct: 270 STNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEMS 326
Query: 74 GG---IFNARTKIDK-----------GRGGNIENITIRYIKME 102
GG IF KID RGG EN+ +R I+ +
Sbjct: 327 GGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD 369
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 36/198 (18%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
ST++ I G+D +A+K G + P+ N+++R + GV IGSEMS
Sbjct: 280 STDIEIVGVRFSVGDDCIAIKAGKIWPDGTVPAPTRNVSVRHCL-MERGHGGVVIGSEMS 338
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G + + R K +GRGG + I + M+ VK P+ I PD
Sbjct: 339 GSVTDVTVAFCTMRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPD 398
Query: 120 ------EGRDP----KALPKIRGISFVNVVSVNT----------IKAPVRAGIIVLAPSV 159
+ R P A PKI I F N +APV +G+ + SV
Sbjct: 399 GRSDAVQNRAPAPVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPV-SGLTIADVSV 457
Query: 160 KWQSQFVSGFNSQVFPLP 177
+ + V+ LP
Sbjct: 458 TYAPEAVADVPDMALGLP 475
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
STNV IE+ G+D +A+K G + G + + + N+ +R + IGSEMS
Sbjct: 260 STNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEMS 316
Query: 74 GG---IFNARTKIDK-----------GRGGNIENITIRYIKME 102
GG IF KID RGG EN+ +R I+ +
Sbjct: 317 GGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD 359
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TN + + ++G+D + +K G + G P N+ ++ + + G +GSEMSG
Sbjct: 251 TNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NVVLHGHGGFVVGSEMSG 309
Query: 75 GIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
G+ N R K +GRGG +ENI I I M + IP
Sbjct: 310 GVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINM--IDIP 354
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V ED + +G+D + +K G + G + PS++I R + G+G+GSEMSGGI
Sbjct: 277 VLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMSGGI 334
Query: 77 FNA--------------RTKIDKGRGGNIENITIRYIKMERVK--IPIRIGRGSNSHPDE 120
R K + RGG +E I IR K+ K ++ SN H
Sbjct: 335 KRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRIRGSKVASFKHLFWFQLNYPSNLH--- 391
Query: 121 GRDPKALPK--IRGISFVNVVSVNTIKAPVRA 150
G P I ++ NV +V I AP A
Sbjct: 392 GNFPATYTDIIIEDLTVENVGTVLEIHAPDAA 423
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D ST+V +E+C I+ +D + +K G + G+ + RP+ I +R G G+
Sbjct: 256 DSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIAR----KGAGLITC 311
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + I + V+
Sbjct: 312 GSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNVQ 362
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D ST+V +E+C I+ +D + +K G + G+ + RP+ I +R G G+
Sbjct: 256 DSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIAR----KGAGLITC 311
Query: 69 GSEMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVK 105
GSE SG I N R K RGG +ENI + I + V+
Sbjct: 312 GSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNVQ 362
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D +V +E+C + +D + +K G + GI + RP +IT++ GV IGSE
Sbjct: 207 DSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQNCE--IRAGFGVTIGSE 264
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+SGG++ R K R G I ++ + + M VK P
Sbjct: 265 VSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKYPFHF 317
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V IE+ + G+D + +K G + G P+ N+ +R + G IGSEMSGG
Sbjct: 278 VLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCK-VYHAHGGFVIGSEMSGGA 336
Query: 77 FN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
N R K +GRGG +ENI I+M + IP
Sbjct: 337 RNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQM--IDIP 379
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 21/107 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
NV + + + G+D + +K G N G P+ N+ ++ Y G G +GSEM
Sbjct: 282 NVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKN----NTVYHGHGGFVVGSEM 337
Query: 73 SGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVK 105
SGG+ R K +GRGG +E I I +I M +K
Sbjct: 338 SGGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIK 384
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 23/109 (21%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
N I + + G+D + +K G + G AR N+ V G T Y G G +GSEM
Sbjct: 288 NALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVI---VDGCT-VYKGHGGFVVGSEM 343
Query: 73 SGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
SGG+ N R K +GRGG +ENI IR I M + IP
Sbjct: 344 SGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISM--IDIP 390
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G ARP N+ V G T + G +GSEMS
Sbjct: 298 NALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVV---VDGCTVFKGHGGFVVGSEMS 354
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI I + M
Sbjct: 355 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 396
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 27/140 (19%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN-------- 78
G+D +AVK G + G PSSNI + + + V +GSEM+GG+ N
Sbjct: 294 GDDCIAVKSGKIYMGRRYKTPSSNIHVYQCL-MEHGHGAVTVGSEMAGGVNNLIVEKCRF 352
Query: 79 ------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD------EGRDP 124
R K +GRG + ++NI R + ME+V P PD + R+P
Sbjct: 353 YHTDRGLRIKTRRGRGKDAILDNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREP 412
Query: 125 ----KALPKIRGISFVNVVS 140
P ++ F N+ +
Sbjct: 413 YPVDDGTPSMKRFCFENITA 432
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V ED + +G+D + +K G + G + PS++I R + G+G+GSEMSGGI
Sbjct: 277 VLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMSGGI 334
Query: 77 FNA--------------RTKIDKGRGGNIENITIRYIKMERVK--IPIRIGRGSNSHPDE 120
R K + RGG +E + IR K+ K ++ SN H
Sbjct: 335 KRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLNYPSNLH--- 391
Query: 121 GRDPKALPK--IRGISFVNVVSVNTIKAPVRA 150
G P I ++ NV +V I AP A
Sbjct: 392 GNFPATYTDIIIEDLTVENVGTVLEIHAPDAA 423
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S V ED + +G+D + +K G + G + PS++I R + G+G+GSEMS
Sbjct: 274 SQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMS 331
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK--IPIRIGRGSNSH 117
GGI R K + RGG +E + IR K+ K ++ SN H
Sbjct: 332 GGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLNYPSNLH 391
Query: 118 PDEGRDPKALPK--IRGISFVNVVSVNTIKAPVRA 150
G P I ++ NV +V I AP A
Sbjct: 392 ---GNFPATYTDIIIEDLTVENVGTVLEIHAPDAA 423
>gi|326799725|ref|YP_004317544.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550489|gb|ADZ78874.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 528
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 24/185 (12%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE C +++G+D +A+K G G+ + RP+ N+ +R + G+ IGSE +
Sbjct: 278 SKNVLIEYCTLQTGDDCLAMKAGRGWDGLRVNRPTENVVVRYCLAEK-GHGGITIGSETA 336
Query: 74 GGI---------FN-----ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-GSNSHP 118
G I FN R K + RGG E + I++ + +R GS H
Sbjct: 337 GMIRKLYVHDCVFNNEGNGIRFKTRRPRGGGGEQLFYDRIRLRVGETALRWDMLGSAVHV 396
Query: 119 DEGRDP-------KALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNS 171
D + P R I N++ V VR I AP K + + V
Sbjct: 397 GAAADRSQKVELNELAPHFRDIQISNLI-VEDASHFVRIDGIPEAPLEKVEIRQVRAKTE 455
Query: 172 QVFPL 176
++F +
Sbjct: 456 KLFDI 460
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G ARP N+ V G T + G +GSEMS
Sbjct: 288 NALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVV---VDGCTVFKGHGGFVVGSEMS 344
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI I + M
Sbjct: 345 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSM 386
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 17/120 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I G+D +AVK G + G PS NI +R+ + V +GSEM+GG
Sbjct: 283 NVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCL-MENGHGAVTVGSEMAGG 341
Query: 76 IFN--------------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K +GRG + ++ I R I M++V P I PD
Sbjct: 342 VKNLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPD 401
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 17/120 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I G+D +AVK G + G PS NI +R+ + V +GSEM+GG
Sbjct: 283 NVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCL-MENGHGAVTVGSEMAGG 341
Query: 76 IFN--------------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ N R K +GRG + ++ I R I M++V P I PD
Sbjct: 342 VKNLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPD 401
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V I++ ++G+D +A+K G N G + PS NI + + + GV +GSEMS
Sbjct: 284 SRDVVIKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIEN-NHMQDGHGGVVMGSEMS 342
Query: 74 GGIFNA----------------RTKIDKGRGGNIENITIRY 98
G + N R K + RGG +EN+ R+
Sbjct: 343 GSVRNVFAQHNVMDSPNLHRALRIKTNSVRGGIVENVYFRH 383
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G N YG A N TM G G+ +
Sbjct: 340 DACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITL 393
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 394 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 447
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR--RVSGTTPTYSGVGIG 69
+ ++V I C + +D VAVK G + G + PS NI +R R SG + G+ +G
Sbjct: 272 ECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSG---RWGGMTVG 328
Query: 70 SEMSGGI--------------FNAR--------TKIDKGRGGNIENITIRYIKMERVK 105
SEMSGG+ F R K K RGG I+ + IR + V+
Sbjct: 329 SEMSGGVRDIFAENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVE 386
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I + +I+ G+D +A+K G +A NIT+ + + GV +GSEMSG
Sbjct: 189 NVRISNYHIDVGDDCIAIKAGTEDTYERIA--CENITITNCT-MVHGHGGVVLGSEMSGS 245
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
I N R K +GRGG +E+I + I M+ V P + P G
Sbjct: 246 IRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGP-RG 304
Query: 122 RDP-----------KALPKIRGISFVNVVSVN 142
++P + P R I F N+ + N
Sbjct: 305 KEPYVWEKTAYPIDERTPAFRRIHFSNITARN 336
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I C G+D +AVK G G PSSNI +R+ + + +GSEM+ G
Sbjct: 291 DVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCC-MRDGHGSITLGSEMAAG 349
Query: 76 IFN--------------ARTKIDKGRGGN--IENITIRYIKMERV---KIPIRIGRGSNS 116
I N R K +GRG + I+ I I+M+ V P I
Sbjct: 350 IKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDSVLTLLTPFVINSFYFC 409
Query: 117 HPD------EGRDPKAL----PKIRGISFVNVVSVN 142
PD + ++P A+ P+I+ + F N+ + N
Sbjct: 410 DPDGHSEYVQCKEPLAVDERTPQIKELCFRNIQAKN 445
>gi|320107935|ref|YP_004183525.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926456|gb|ADV83531.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNH-----------YGIAMARPSSNITMRRVSGTTPT 62
S NV I +I++G+D +A+K G +H +G++M + + + V T
Sbjct: 248 SQNVTITKSWIDNGDDNIAIKAGVHHMSVIDNHFYSGHGMSMGSEARDESEILVDTLTLD 307
Query: 63 YSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGR 122
++ GI R K + RGG + + R + M V +PI I N +G
Sbjct: 308 HTTSGI-----------RIKSNVQRGGMVRGVVYRNLCMRDVAVPISISPFYNGQTTDGI 356
Query: 123 DPKAL-----PKIRGISFVNVVSV 141
D L P +GI NV+S+
Sbjct: 357 DDLGLKGSFTPDYKGIRVENVLSL 380
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
NV I + + G+D + K G N G P+ N+ ++ Y G G +GSEM
Sbjct: 296 NVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVK----NNIVYHGHGGFVVGSEM 351
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
SGG+ N R K +GRGG +ENI I I M + IP
Sbjct: 352 SGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDM--IDIP 398
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S N+ + I G+D VA+K G RP+ N+ +R + V +GSEMS
Sbjct: 279 SQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRNCL-MQRGHGAVVMGSEMS 337
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR----GSN 115
GI + R K +GRGG + I++ +ME V PI + ++
Sbjct: 338 QGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRMEDVATPIAVNAFYFCDAD 397
Query: 116 SHPDEGRDPKAL------PKIRGISFVNV 138
D + AL PKI GI N+
Sbjct: 398 GRSDYVQSRTALPVSLTTPKIEGIDIRNL 426
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR----RVSGTTPTYSGVG 67
D S+ + +E+C I+ +D +K G + G+ + RP+ I +R R G T
Sbjct: 244 DSSSYILVENCDIDCNDDNFCLKSGRDADGLRVNRPTEYIVIRNCISRAGGGLLT----- 298
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK 105
GSE SGGI + R K RGG E+I IR ++M+ V+
Sbjct: 299 CGSETSGGIRHVLAEGLKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVR 350
>gi|372210444|ref|ZP_09498246.1| polygalacturonase [Flavobacteriaceae bacterium S85]
Length = 469
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 31/154 (20%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ST+ I++C I+SG+D + K +PSS++ +++ + + G+E
Sbjct: 232 DSSTHGEIKNCTIDSGDDAICFKS-------TSPKPSSDVVVKKCK-IKSEWGAIKFGTE 283
Query: 72 MSGGIFNARTK---IDKGRGG----------NIENITIRYIKMERVKIP--IRIGRGSNS 116
G N K I RGG NI N+ I I+M V++P IR+G
Sbjct: 284 SMGDFTNITIKDCFIHDTRGGGIKILSVDGANINNVCIENIEMTNVEMPIFIRLGERRLV 343
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRA 150
+ D R P + +N V++ +KA R+
Sbjct: 344 YRDAKRQP--------VGTINNVTIRNVKATTRS 369
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 17/120 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I Y G+D +A+K G + G PS +I +R+ + + IGSEM+GG
Sbjct: 304 DVEIAGVYFSLGDDCIAIKSGKIYMGAKYRVPSEDIVIRQCC-MRDGHGSITIGSEMAGG 362
Query: 76 IFN--------------ARTKIDKGRG--GNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ + R K +GRG I+ I +I+M+ V P I PD
Sbjct: 363 VKHLTVKDCLFLHTDRGLRIKTRRGRGEAAVIDGILFEHIRMDHVMTPFVINCFYYCDPD 422
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N + +C + G+D + +K G + G P N+ + + G +GSEMSGG
Sbjct: 294 NTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCV-VYHGHGGFVVGSEMSGG 352
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +ENI I+ I M + IP
Sbjct: 353 VKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDM--INIP 396
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M+R G G+ I
Sbjct: 287 NVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRGHG------GLVI 340
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-- 112
GSEMSGG+ + R K +GRGG + NIT+R + ++ V+ +
Sbjct: 341 GSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLDGVQTALSANAHY 400
Query: 113 --GSNSHPD--EGRDPKALPKIRGISFVNVVSVNTIK 145
++ H D + R+P P G FV+ ++V ++
Sbjct: 401 HCDADGHDDWVQSRNPA--PVNDGTPFVDGITVEDVE 435
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + + + G+D + +K G N G P N+ + + + G +GSEMSGG
Sbjct: 285 NVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCT-VFKGHGGFVVGSEMSGG 343
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
+ N R K ++GRGG +ENI I I M
Sbjct: 344 VRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISM 383
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
+ +C + G+D + +K G + G +P+ ++ + G IGSEMSGG+ N
Sbjct: 299 VTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCV-VYHGHGGFVIGSEMSGGVRN 357
Query: 79 A--------------RTKIDKGRGGNIENITIRYIKMERV 104
R K +GRGG +ENI + I+M +
Sbjct: 358 LFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDI 397
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 35/157 (22%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M R G G+ I
Sbjct: 287 NVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGVRVGHCLMERGHG------GLVI 340
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-- 112
GSEMSGG+ + R K +GRGG + NI +R + ++ VK +
Sbjct: 341 GSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSANAHY 400
Query: 113 --GSNSHPD--EGRDPKALPKIRGISFVNVVSVNTIK 145
++ H D + R+P P G F++ ++V ++
Sbjct: 401 HCDADGHDDWVQSRNPA--PVDSGTPFIDGITVEDVE 435
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G AR N+ V G T + G +GSEMS
Sbjct: 287 NALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVV---VDGCTVFKGHGGFVVGSEMS 343
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI +R + M
Sbjct: 344 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSM 385
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ ++++ I C + +D +AVK G + G + PS NI +R + + GV +GSE
Sbjct: 260 ECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVAVGSE 318
Query: 72 MSGGI------------------FNAR----TKIDKGRGGNIENITIR 97
MSGG+ +N R K +K RGG+I + IR
Sbjct: 319 MSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIR 366
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ +GSE +
Sbjct: 264 SKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVI-RYSLARQGHGGITVGSETA 322
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG EN+ I+M
Sbjct: 323 AMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGENLHYERIRM 364
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 35/157 (22%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M+R G G+ I
Sbjct: 287 NVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRGHG------GLVI 340
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-- 112
GSEMSGG+ + R K +GRGG + NIT+R + ++ V+ +
Sbjct: 341 GSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLDGVQTALSANAHY 400
Query: 113 --GSNSHPD--EGRDPKALPKIRGISFVNVVSVNTIK 145
++ H D + R+P P G FV+ ++V ++
Sbjct: 401 HCDADGHDDWVQSRNPA--PVNDGTPFVDGITVEDVE 435
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ ++++ I C + +D +AVK G + G + PS NI +R + + GV +GSE
Sbjct: 275 ECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVAVGSE 333
Query: 72 MSGGI------------------FNAR----TKIDKGRGGNIENITIR 97
MSGG+ +N R K +K RGG+I + IR
Sbjct: 334 MSGGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIR 381
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 33/160 (20%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TN I C I++G+D + +K G +NI + G+ IGSE +
Sbjct: 287 TNAWIHHCDIDTGDDNIVIKSG-----------GTNILIEDC--VIKHGHGISIGSETTE 333
Query: 75 GIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK--IPIRIGRGSNSHP 118
G+ N R K +G GG +ENI I M+ V+ I + + N+ P
Sbjct: 334 GVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRYTGITMKDVENAIVLDLTYTDNNRP 393
Query: 119 DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPS 158
+ DP +P IR I +V T+ ++AG IV P
Sbjct: 394 NFRGDPTKIPVIRDILIDHV----TVTGSLKAGKIVGLPD 429
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I + + G+D + K G + G P+ N+ ++ + + G +GSEMSGG
Sbjct: 288 NVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKN-NIVYHGHGGFTVGSEMSGG 346
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
I N R K +GRGG +ENI I I M + IP
Sbjct: 347 IKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINM--INIP 390
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S V ED + +G+D + +K G + G + PS++I R + G+G+GSEMS
Sbjct: 274 SQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSEMS 331
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVK--IPIRIGRGSNSH 117
GGI R K + RGG +E + IR ++ K ++ SN H
Sbjct: 332 GGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRIRGSEVASFKHLFWFQLNYPSNLH 391
Query: 118 PDEGRDPKALPK--IRGISFVNVVSVNTIKAPVRA 150
G P I ++ NV +V I AP A
Sbjct: 392 ---GNFPATYTDIIIEDLTVENVGTVLEIHAPDAA 423
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR--RVSGTTPTYSGVGIG 69
+ ++V I C + +D VAVK G + G + PS NI +R + SG + G+ +G
Sbjct: 278 ECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSG---RWGGMTVG 334
Query: 70 SEMSGGI--------------FNAR--------TKIDKGRGGNIENITIRYIKMERVK 105
SEMSGG+ F R K +K RGG I+ + IR + V+
Sbjct: 335 SEMSGGVRDIFAENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVE 392
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 21/106 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
N IE C ++ G+D + +K G + G P+ N +R Y+G G +GSEM
Sbjct: 285 NFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRN----NTVYNGHGGFVVGSEM 340
Query: 73 SGG---IF-----------NARTKIDKGRGGNIENITIRYIKMERV 104
SGG +F R K +GRGG +E+I + I M+ +
Sbjct: 341 SGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNI 386
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
STNV IE G+D +A+K G + G + + + N+ +R + IGSEMS
Sbjct: 260 STNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSEMS 316
Query: 74 GGIFN---ARTKIDK-----------GRGGNIENITIRYIKME 102
GG+ N KID RGG EN+ +R I+ +
Sbjct: 317 GGVRNIYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD 359
>gi|445494991|ref|ZP_21462035.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791152|gb|ELX12699.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 868
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 31/144 (21%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
S N+ I +I +G+D VA+K G + P+ NI++ YSG G IGSE
Sbjct: 231 SRNITIAYSHIRTGDDNVAIKAG-------SSGPTENISILH----NHFYSGHGMSIGSE 279
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
+GG+ R K D RGG ++ ++ R + + VK PI I N
Sbjct: 280 TNGGVRRVLVDDLNMDGTTSGLRIKSDVSRGGVVDQVSYRNVCLRDVKTPIDISTRYNPR 339
Query: 118 PDEGRDPKALPKIRGISFVNVVSV 141
+ +P I+F V SV
Sbjct: 340 AEGA----LIPVYTNIAFDGVHSV 359
>gi|224138026|ref|XP_002322711.1| predicted protein [Populus trichocarpa]
gi|222867341|gb|EEF04472.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNH-----------YGIAMARPSSNITMRRVSGTTPT 62
+ N+ I D I +G+D +++ G ++ +GI++ ++ + VSG T
Sbjct: 266 TQNIQITDSVIGTGDDCISIVSGSHNVQATGITCGPGHGISIGSLGAHDSKDHVSGVTVK 325
Query: 63 YSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGR 122
G+++SG R K +G GN+ NI + I+M +V PI I + +
Sbjct: 326 ------GAKLSGTANGVRIKTWQGGSGNVSNIKFQNIEMNKVTNPIIIDQNYCDQDKPCK 379
Query: 123 DPKALPKIRGISFVNVVSVNTIKAPVR 149
K+ +++ + + N+ + + +R
Sbjct: 380 QQKSALQVKNVMYKNIKGTSASEVAMR 406
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S +V +E I+ +D + +K G + G+ + RP+ ++ +R S +GV GSE
Sbjct: 276 DSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRD-SIIRHAEAGVTFGSE 334
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRI 110
SG I N K RGG + +I IR +K++ + +R+
Sbjct: 335 TSGSIRNIDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNAEAAVRV 388
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 12 DLSTN-VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGS 70
D+S N + I+DC I +G+D G +SN+ ++ G+ IGS
Sbjct: 217 DVSGNKILIKDCDISTGDDNFTCGGG-----------TSNVHIQNCK--YGYGHGLSIGS 263
Query: 71 EMSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
GG+ N R K D+ RGG ++N+T R IKME V +PI I
Sbjct: 264 YTKGGVSNFLIEDCSFTNTECGIRIKSDRDRGGVVQNLTYRNIKMENVGMPILI 317
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G + YG A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRHLIRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 444 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTL 497
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G R N+ V G T + G +GSEMS
Sbjct: 288 NTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVV---VDGCTVFKGHGGFVVGSEMS 344
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
GG+ N R K +GRGG +ENI IR I M + IP
Sbjct: 345 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISM--IDIP 390
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ S NV I++ +G+D +A+K G + G + + NI +R + GV IGSE
Sbjct: 289 EYSQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCK-MIDGHGGVVIGSE 347
Query: 72 MSGGIFNA----------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN 115
MS G+ N R K + RGG ++ + ++ + + VK + + N
Sbjct: 348 MSAGVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAV-LHITMN 406
Query: 116 SHPDEGRDPKALPKIRGISFVNV 138
+ R P+IR I +V
Sbjct: 407 YKDYKNRTGNFTPQIRNILLEDV 429
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSN--ITMRRVSGTTPTYSGVGIG 69
D S++V + C I+ +D + +K G + G+ + P+ IT V G +GV IG
Sbjct: 217 DSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVNLPTERVRITDNVVRGGA---AGVTIG 273
Query: 70 SEMSGGI-------FNARTKIDKG--------RGGNIENITIRYIKMERVKIPIRI 110
SE SGGI + + G RGG IE+I IR + V P+ I
Sbjct: 274 SETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGGTIEDIAIRNVITVGVATPVSI 329
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 23 YIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA--- 79
Y G+D +A+K G + G PS NI +R+ + V IGSEM+ G+ +
Sbjct: 289 YFSLGDDCIALKSGKYYMGHKYKVPSQNIEVRQCC-MNNGHGAVTIGSEMAAGVKHVHVK 347
Query: 80 -----------RTKIDKGRGGN--IENITIRYIKMERVKIPI 108
R K +GRG + +E+I I+M+ V P
Sbjct: 348 DCLFLHTDRGLRIKTRRGRGKDAVVEDICFENIRMDHVLTPF 389
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G R N+ V G T + G +GSEMS
Sbjct: 288 NALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVV---VDGCTVFKGHGGFVVGSEMS 344
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI IR I M
Sbjct: 345 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 298 NALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI----------G 111
+ N R K +GRGG +E I I I M + IP G
Sbjct: 357 VKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIPHEALLFDLFYGGKG 414
Query: 112 RGSNSHPD-EGRDPKALPKI 130
G + D EGR ++P +
Sbjct: 415 AGEETEDDLEGRMKSSVPPV 434
>gi|409441796|ref|ZP_11268657.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
gi|408746731|emb|CCM79902.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
Length = 780
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
ST+V I + YI +G+D +A+K G A P++++T+ V G+ IGSE
Sbjct: 248 STDVTIAESYISTGDDNIAIKGG-------SAGPTAHVTI--VGNHLYAGHGMSIGSETQ 298
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
G+ + R K D+ RGG + NI + + + P+
Sbjct: 299 SGVSDVLITDMTLDGTTNGLRIKSDRSRGGLVRNIDFENVCLRNTRAPL 347
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G + YG A N TM G G+ +
Sbjct: 392 DACTDVLCEDCTFNTGDDCIAIKSGKDRDVEYGPAKRHLIRNCTMNSGHG------GITL 445
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 446 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTL 499
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G R N+ V G T + G +GSEMS
Sbjct: 288 NALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVV---VDGCTVFKGHGGFVVGSEMS 344
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI IR I M
Sbjct: 345 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 24 IESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA---- 79
I G+D +A+K G+ + R + +R + G+ IGSEMSGG+ +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQ 348
Query: 80 ----------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD------EG 121
R K +GRG I+ + R ++M VK P I PD +
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQC 408
Query: 122 RDP----KALPKIRGISFVNVVSVN 142
R+P + PK+ ++ N+V+ +
Sbjct: 409 REPLPVDEYTPKLGSLTMENIVATD 433
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I I G+D VA+K G + + +P+ NI +R S + V IGSE++ G
Sbjct: 283 NVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAG 341
Query: 76 IFNART--------------KIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+++ R K +GRG ++NI I M+ V +P PD
Sbjct: 342 VYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPD 401
Query: 120 EGRD 123
D
Sbjct: 402 GHSD 405
>gi|85058593|ref|YP_454295.1| hypothetical protein SG0615 [Sodalis glossinidius str. 'morsitans']
gi|84779113|dbj|BAE73890.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 199
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S N+ IE+C + G+D V +K G G+ + P+ +++ + ++ G+ IGSE
Sbjct: 125 DSSENILIEECLFDVGDDAVTLKSGSGADGLRINMPTRGVSVSQCK-ILASHGGIAIGSE 183
Query: 72 MSGG 75
+GG
Sbjct: 184 TAGG 187
>gi|86143609|ref|ZP_01061994.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830056|gb|EAQ48517.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 491
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR---VSGTTPTYSGVGI 68
D S + +++C I+ +D +K G + G+ + RP+ + +R ++G+ T I
Sbjct: 250 DSSKYILVQNCDIDCNDDNFCLKAGRDWDGLRVDRPTEYVVIRDCIALAGSGLT----TI 305
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE SG I + + K RGG +E+I ++ IKM+ V +++
Sbjct: 306 GSETSGDIRHVFVSNIQGKGTKTGLKIKSATNRGGTVEDIHMQNIKMDSVGTFMQVSMNW 365
Query: 115 N-----SHPDEGRDPKALPK 129
N S EG D ++PK
Sbjct: 366 NPSYSYSKLPEGYDYDSIPK 385
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + GV GSE +GG
Sbjct: 261 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQQGHGGVTCGSETAGG 319
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
+ N R K + R G + + I+M
Sbjct: 320 VKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRM 359
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 314 NALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 372
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI--------GRG 113
+ N R K +GRGG +E I I I M + IP G+
Sbjct: 373 VKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIPHEALLFDLFYGGKA 430
Query: 114 SNSHPDE---GRDPKALPKI 130
+ +E GR A+P++
Sbjct: 431 AGEETEEDLKGRMKTAVPQV 450
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I I G+D VA+K G + + +P+ NI +R S + V IGSE++ G
Sbjct: 283 NVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAG 341
Query: 76 IFNA--------------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+++ R K +GRG ++NI I M+ V +P PD
Sbjct: 342 VYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPD 401
Query: 120 EGRD 123
D
Sbjct: 402 GHSD 405
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 21/113 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARP--SSNITMRRVSGTTPTYSGVGIGSEMS 73
NV I G+D +A+K G I+ P S NI +R + + + V +GSEMS
Sbjct: 282 NVLILGDTFSVGDDCIAIKSG--KIDISKKNPVSSENINIRNCNMRSG-HGAVVLGSEMS 338
Query: 74 GG---------IFNA-----RTKIDKGRG--GNIENITIRYIKMERVKIPIRI 110
G IFNA R K +GRG G I+NI ++ IKM++V P I
Sbjct: 339 SGLKSIFIEKCIFNATDRGLRIKTRRGRGSKGIIDNIHMKNIKMDKVLTPFSI 391
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + + G+D + +K G + G RP+ N+ + + G +GSEMSG
Sbjct: 289 NSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCK-VFQGHGGFVVGSEMSGS 347
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKM 101
+ N R K +GRGG +ENI IR I M
Sbjct: 348 VRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINM 387
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V I++ YI +D +++K G +A R IT++ SG+ IGSE
Sbjct: 189 DSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDCQ--LGYGSGIAIGSE 246
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI R K RGG I +T + M+ V P + +N +
Sbjct: 247 TSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLL--QTNWY 304
Query: 118 PD 119
PD
Sbjct: 305 PD 306
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V I++ YI +D +++K G +A R IT++ SG+ IGSE
Sbjct: 189 DSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDCQ--LGYGSGIAIGSE 246
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI R K RGG I +T + M+ V P + +N +
Sbjct: 247 TSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLL--QTNWY 304
Query: 118 PD 119
PD
Sbjct: 305 PD 306
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 298 NALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +E I I I M + IP
Sbjct: 357 VKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIP 400
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G N YG A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 444 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G N YG A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 444 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G N YG A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRHLVRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 444 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 296 NALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 354
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +E I I I M + IP
Sbjct: 355 VKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I I G+D VA+K G + + +P+ NI +R S + V IGSE++ G
Sbjct: 283 NVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRKGHGSVTIGSEVAAG 341
Query: 76 IFNA--------------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+++ R K +GRG ++NI I M+ V +P PD
Sbjct: 342 VYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENIIMKDVCMPFTANMFYFCDPD 401
Query: 120 EGRD 123
D
Sbjct: 402 GHSD 405
>gi|225874239|ref|YP_002755698.1| endo-polygalacturonase/pectinesterase [Acidobacterium capsulatum
ATCC 51196]
gi|225792396|gb|ACO32486.1| endo-polygalacturonase/pectinesterase [Acidobacterium capsulatum
ATCC 51196]
Length = 794
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
S NV I YI G+D VA+K G SS++T+ YSG G IGSE
Sbjct: 250 SENVTITHSYIRDGDDDVAIKAG-------TGGSSSHMTI----SDDHFYSGHGMSIGSE 298
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPI 108
+GG+ + R K D RGG ++++T R I M V PI
Sbjct: 299 TNGGVRDILVENLSLDGTTNGIRIKSDLSRGGLVDHVTYRNICMRDVPHPI 349
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRV--SGTTPTYSGVGIG 69
+ ++V I C + +D VAVK G + G + PS NI +R SG + G+ +G
Sbjct: 228 ECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSG---RWGGMTVG 284
Query: 70 SEMSGGI--------------FNAR--------TKIDKGRGGNIENITIRYIKMERVK 105
SEMSGG+ F R K K RGG I+ + IR + V+
Sbjct: 285 SEMSGGVRDVFAENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVE 342
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 55/134 (41%), Gaps = 33/134 (24%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
NV I + + G+D + K G N G P+ N+ ++ Y G G +GSEM
Sbjct: 297 NVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVK----NNIVYHGHGGFVVGSEM 352
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKI-PIR-------- 109
SG + N R K +GRGG +ENI I I M + PIR
Sbjct: 353 SGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYGGN 412
Query: 110 ---IGRGSNSHPDE 120
+ G NS P E
Sbjct: 413 APVMDDGDNSAPSE 426
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 34/164 (20%)
Query: 17 VCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGI 76
V +++ ++ G+D + +K G + G + S I + + + G IGSEMSGG
Sbjct: 272 VEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHD-NVVYKAHGGFVIGSEMSGGA 330
Query: 77 FN--------------ARTKIDKGRGGNIENITIRYIKMERV------------KIPIRI 110
+ R K +GRGG +ENI I+ I M + P+ +
Sbjct: 331 HDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDIVNDAISFDMYYFGKPVSL 390
Query: 111 GRGSNSHP--DEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
G G P DEG P+ R N+V +A + G+
Sbjct: 391 GAGKIEIPPVDEGT-----PQFRKFYISNIVCDGASRAMIIRGL 429
>gi|27377104|ref|NP_768633.1| polygalacturonase [Bradyrhizobium japonicum USDA 110]
gi|12620686|gb|AAG60962.1|AF322013_81 ID636 [Bradyrhizobium japonicum]
gi|27350247|dbj|BAC47258.1| blr1993 [Bradyrhizobium japonicum USDA 110]
Length = 510
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 48/213 (22%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V I +I +G+D VA+K G N SS+I++ + G+ IGSE++
Sbjct: 310 SQDVTITHSWIRTGDDNVAIKAGDNG-------SSSHISI--IDNYFGWGHGMSIGSEVN 360
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G + R K D GRGG +EN+T Y+ + + P+ D
Sbjct: 361 SGARDILVRNLTLDGTTSGLRIKSDVGRGGLVENVTYEYVCLRGNRWPLAF--------D 412
Query: 120 EGRDPKA----LPKIRGISFVNVVSVNTI----------KAPVRAGIIVLAPSVKWQSQF 165
DP+A +P R I +V + V + A S WQ +
Sbjct: 413 AKYDPRAQGTRIPVYRQIVLRHVHGDTGVLLMRGIDERHALDVTLEDVRFANSATWQLEH 472
Query: 166 --VSGFNSQVF-PLPCPQLQNKTRFSWVTSYPF 195
VS +S V+ PLP Q R S V S F
Sbjct: 473 ANVSANHSDVWPPLPGRATQPPLRGSEVCSKAF 505
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV + + + G+D + +K G + G P NI + + G +GSEMSGG
Sbjct: 287 NVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCI-VFHGHGGFVVGSEMSGG 345
Query: 76 IFNART--------------KIDKGRGGNIENITIRYIKMERV 104
+ N R K +GRGG +ENI I I M +
Sbjct: 346 VRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNI 388
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 25 ESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA----- 79
+ G+D + +K G N G + P+ ++ +R + G IGSEMS G+ +
Sbjct: 265 DVGDDAICIKSGKNAIGRKITVPTEHVRIRDCV-VYHGHGGFVIGSEMSRGVRDVVIENC 323
Query: 80 ---------RTKIDKGRGGNIENITIRYIKMERVK 105
R K GRGG +E+ITIR I+M ++
Sbjct: 324 LFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIE 358
>gi|384221525|ref|YP_005612691.1| hypothetical protein BJ6T_78570 [Bradyrhizobium japonicum USDA 6]
gi|354960424|dbj|BAL13103.1| hypothetical protein BJ6T_78570 [Bradyrhizobium japonicum USDA 6]
Length = 432
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 48/213 (22%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V I +I +G+D VA+K G N SS+I++ + G+ IGSE++
Sbjct: 232 SQDVTITHSWIRTGDDNVAIKAGDNG-------SSSHISI--IDNYFGWGHGMSIGSEVN 282
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G + R K D GRGG +EN+T Y+ + + P+ D
Sbjct: 283 SGARDILVRNLTLDGTTSGLRIKSDVGRGGLVENVTYEYVCLRGNRWPLAF--------D 334
Query: 120 EGRDPKA----LPKIRGISFVNVVSVNTI----------KAPVRAGIIVLAPSVKWQSQF 165
DP+A +P R I +V + V + A S WQ +
Sbjct: 335 AKYDPRAQGTRIPVYRQIVLRHVHGDTGVLLMRGIDERHALDVTLEDVRFANSATWQLEH 394
Query: 166 --VSGFNSQVF-PLPCPQLQNKTRFSWVTSYPF 195
VS +S V+ PLP Q R S V S F
Sbjct: 395 ANVSANHSDVWPPLPGRATQPPLRGSEVCSKAF 427
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Query: 6 KRKHYTD-LSTNVC----IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT 60
K H TD L C + + G+D +AVK G + G PS +IT+R+ S
Sbjct: 267 KDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPSEHITIRQCS-MN 325
Query: 61 PTYSGVGIGSEMSGGIFN--------------ARTKIDKGRGGN--IENITIRYIKMERV 104
+ V IGSE+ G+ + R K +GRG + ++ + I+M+ V
Sbjct: 326 DGHGSVVIGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRGEDCVVDRVAFENIRMDGV 385
Query: 105 KIPIRIGRGSNSHPD------EGRDP----KALPKIRGISFVNVVSVNTIKAPVRA 150
P + PD + ++P + P I+ +SF ++ + N A V A
Sbjct: 386 LTPFVVNCFYFCDPDGRTEYVQSKEPLPVDERTPSIQELSFKDIHAENAHYAAVCA 441
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 296 NALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 354
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +E I I I M + IP
Sbjct: 355 VKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 296 NALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 354
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +E I I I M + IP
Sbjct: 355 VKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|265754983|ref|ZP_06089897.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513278|ref|ZP_08792800.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229437102|gb|EEO47179.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263234594|gb|EEZ20173.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 523
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV +E C + G+D A+K G N G M + N+ +R + G+ GSE
Sbjct: 272 SKNVLVEYCTMNCGDDCYAIKGGRNEEGARMGISAENVIIRNCLAKA-GHGGLTTGSETG 330
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERV 104
GGI N R K + R G ENI ++++ V
Sbjct: 331 GGIKNIYAYNCVFDGTDMPLRFKTRRPRTGITENIFYERLRIKNV 375
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 296 NALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKD-NTVLHGHGGFVVGSEMSGG 354
Query: 76 IFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +E I I I M + IP
Sbjct: 355 VKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM--IDIP 398
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
N I + ++G+D + +K G + G P N+ ++ + + G +GSEMSGG
Sbjct: 298 NALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHGHGGFVVGSEMSGG 356
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+ N R K +GRGG +E I I I M + IP
Sbjct: 357 VKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM--IDIP 400
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMR--RVSGTTPTYSGVGIG 69
+ S NV IED + +D +A+K G ++ G + S NI +R R G GV IG
Sbjct: 259 EYSKNVLIEDIDFNNADDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKGL----HGVVIG 314
Query: 70 SEMSGGIFNA 79
SEMS G+ N
Sbjct: 315 SEMSAGVQNV 324
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IG 69
D S +V +E I +D + +K G + G+ + +P +I +R T Y IG
Sbjct: 228 DSSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDVDIVIRNC---TVRYGAAAFTIG 284
Query: 70 SEMSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGS 114
SE SGG N K RGG +NI I +++ V IPI I
Sbjct: 285 SETSGGFRNVDVYNIHALEHVPSGVLFKSAHTRGGWADNIRIHDFQLDGVAIPIHITMNW 344
Query: 115 NSHPDEGRDPKALPKI 130
N + P L +
Sbjct: 345 NPSYSYAKIPHGLKHV 360
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV I C G+D +A+K G G +P+ N +R + V +GSEM+GG
Sbjct: 276 NVWISGCRFSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCL-MQFGHGAVTLGSEMAGG 334
Query: 76 IFN--------------ARTKIDKGRGGN--IENITIRYIKMERVKIPIRI 110
+ N R K +GRG + I+ + +KM V PI I
Sbjct: 335 VRNLTVERCIFDHTDRGLRIKTRRGRGKDAVIDGVLFEKMKMNGVLTPIVI 385
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 26/139 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---I 68
D S V I++C I+ +D +K G + G + RP+ + +R G G +
Sbjct: 282 DSSKWVLIQNCDIDCNDDNFCLKAGRDWDGQRVNRPTEYVVIRNCIAR----KGAGLFTL 337
Query: 69 GSEMSGGIFNARTKIDKG--------------RGGNIENITIRYIKMERVKIPIRIGRGS 114
GSE +G I + KG RGG +E+I+++ I+M+ VK ++I
Sbjct: 338 GSETAGSIRHVYVSNIKGLGTSNGLNIKSALTRGGTVEDISLQNIQMDSVKTFVKISMNW 397
Query: 115 N-----SHPDEGRDPKALP 128
N S EG D ++P
Sbjct: 398 NPSYSYSKLPEGYDIDSIP 416
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S V ++ I +D + +K G + G+ + RP+ +I +R S +GV IGSE
Sbjct: 229 DSSKKVLVQHADIAVNDDALCLKAGRDSDGLRVNRPTEDIVLRD-SVIRDGAAGVTIGSE 287
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGG N K + RGG EN+ I M V + +R+
Sbjct: 288 TSGGFRNIEAYGLTVLKQVPVGILFKSARTRGGWGENLRFHDITMTDVPVVLRV 341
>gi|297739065|emb|CBI28554.3| unnamed protein product [Vitis vinifera]
Length = 1125
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 9 HYTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
H TD STNV +++C I +G+D +++ G SSNI M+ + P + G+ I
Sbjct: 889 HITD-STNVLLQNCKIGTGDDCISIVSG-----------SSNIKMKTIY-CGPGH-GISI 934
Query: 69 GS---EMSGGIFN---------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
GS + S GI R K +G G + + + ++ME V PI I
Sbjct: 935 GSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDVANPILI 994
Query: 111 GRGSNSHPDEGRDPKALPKIRGISFVNV 138
+ P+E ++ + +I I + N+
Sbjct: 995 DQFYCDSPNECKNQTSAVQISQIMYRNI 1022
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
N I + + G+D + +K G + +G P+ N+ ++ Y G G +GSEM
Sbjct: 313 NSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVK----NNVVYHGHGGFVVGSEM 368
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIR 109
S G+ N R K +GRGG +ENI I I M + IP +
Sbjct: 369 SSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDM--INIPTQ 417
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V + + I +G+D +A+K G G A + S IT R G+ IGSE++
Sbjct: 254 SDHVTMSNLEIATGDDNIAIKSGLTQPGQAASDIS--ITQSRFG----EGHGLSIGSELA 307
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
G + R K + RGG+I I+ ++ M+ V++P+ I
Sbjct: 308 NGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHLTMDHVRVPLSI 358
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA------- 79
G+D +A+K G + RPS NI +R + V +GSEMSGG+ N
Sbjct: 293 GDDCIAIKSGKISIPLKERRPSENIIIRNCL-MQYGHGAVVLGSEMSGGVKNVFVERCFF 351
Query: 80 -------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
R K +GRG I+ I ++ I+M+ V P + PD
Sbjct: 352 EDTDRGLRIKTRRGRGNTAIIDQIYVKNIQMKGVLTPFTLNAFYFCDPD 400
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 29/146 (19%)
Query: 24 IESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA---- 79
I G+D +A+K G+ + R + +R + G+ IGSEMSGG+ +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQ 348
Query: 80 ----------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPDEGRDP--- 124
R K +GRG I+ + R ++M VK P I PD G P
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-GHGPYVQ 407
Query: 125 --------KALPKIRGISFVNVVSVN 142
+ PK+ ++ N+V+ +
Sbjct: 408 CREAMPVDEYTPKLGSLTMENIVATD 433
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|359473233|ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
vinifera]
Length = 462
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 40/152 (26%)
Query: 9 HYTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG- 67
H TD STNV +++C I +G+D +++ G SSNI M+ + Y G G
Sbjct: 240 HITD-STNVLLQNCKIGTGDDCISIVSG-----------SSNIKMKTI------YCGPGH 281
Query: 68 ------IGSEMSGGIFNA---------------RTKIDKGRGGNIENITIRYIKMERVKI 106
+G + S GI R K +G G + + + ++ME V
Sbjct: 282 GISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDVAN 341
Query: 107 PIRIGRGSNSHPDEGRDPKALPKIRGISFVNV 138
PI I + P+E ++ + +I I + N+
Sbjct: 342 PILIDQFYCDSPNECKNQTSAVQISQIMYRNI 373
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|147795881|emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
Length = 1052
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 9 HYTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
H TD STNV +++C I +G+D +++ G SSNI M+ + P + G+ I
Sbjct: 830 HITD-STNVLLQNCKIGTGDDCISIVSG-----------SSNIKMKTIY-CGPGH-GISI 875
Query: 69 GS---EMSGGIFN---------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
GS + S GI R K +G G + + + ++ME V PI I
Sbjct: 876 GSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDVANPILI 935
Query: 111 GRGSNSHPDEGRDPKALPKIRGISFVNV 138
+ P+E ++ + +I I + N+
Sbjct: 936 DQFYCDSPNECKNQTSAVQISQIMYRNI 963
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|408794807|gb|AFU91418.1| polygalacturonase, partial [uncultured bacterium]
Length = 70
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNAR 80
G+D VAVK G + G +PS NI++R+ + V +GSEM+GG+ N R
Sbjct: 1 GDDCVAVKSGKIYMGRKYKKPSENISVRQCL-MENGHGAVTVGSEMAGGVRNVR 53
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIA--MARPSSNITMRRV--SGTTPTYSGVGI- 68
S+NV I+DC I +G+D +A+ G ++ I+ P I++ + G T T V +
Sbjct: 196 SSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQ 255
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN-SHPDEGRDPKA 126
G + AR K +G G IT I ++ V+ PI I + N D +D K+
Sbjct: 256 NCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKS 314
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIA--MARPSSNITMRRV--SGTTPTYSGVGI- 68
S+NV I+DC I +G+D +A+ G ++ I+ P I++ + G T T V +
Sbjct: 192 SSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQ 251
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN-SHPDEGRDPKA 126
G + AR K +G G IT I ++ V+ PI I + N D +D K+
Sbjct: 252 NCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKS 310
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I + G+D +AVK G + G PS NI +R+ + V +GSE+ G
Sbjct: 281 DVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPSENIEIRQCL-MENGHGAVTVGSEVGAG 339
Query: 76 I--------------FNARTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ R K +GRG + + +I+ ++I M+ V P + PD
Sbjct: 340 VKAVRVRDCLFRHTDRGLRVKTRRGRGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPD 399
Query: 120 ------EGRDP----KALPKIRGISFVNVVSVNTIKA 146
+ R+ + P+I+ +SF ++ + N A
Sbjct: 400 GKTEYVQCREALPADERTPEIQNLSFTDIKAANCHAA 436
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNI------TMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K +P S + + G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIK---------AEKPDSRFPNGVVDNIYIANNILKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE SGG+ N R K +G+GG ++NIT R KM V+IP+
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPL 334
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV IE G+D +A+K G + G + + + N+ +R + +GSEMSG
Sbjct: 261 TNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITVGSEMSG 317
Query: 75 GIFN---ARTKIDK-----------GRGGNIENITIRYIKME 102
G+ N KID RGG EN+ +R I+ +
Sbjct: 318 GVRNIYIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIEAD 359
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 54/133 (40%), Gaps = 33/133 (24%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG---IGSEM 72
NV I + + G+D + K G + G A P T V Y G G IGSEM
Sbjct: 301 NVVIYNNSFDVGDDAICFKSGKDEDGRKRAVP----TENVVVKNNVVYHGHGGFVIGSEM 356
Query: 73 SGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKI-PIR-------- 109
SGG+ N R K +GRGG +ENI I I M + PIR
Sbjct: 357 SGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYGGK 416
Query: 110 ---IGRGSNSHPD 119
+ G NS PD
Sbjct: 417 SPVLDDGGNSVPD 429
>gi|427385147|ref|ZP_18881652.1| hypothetical protein HMPREF9447_02685 [Bacteroides oleiciplenus YIT
12058]
gi|425727315|gb|EKU90175.1| hypothetical protein HMPREF9447_02685 [Bacteroides oleiciplenus YIT
12058]
Length = 849
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S++V IE C ++ +D +K G G+ + R + N+ +R+ S G+ G+E
Sbjct: 248 DSSSDVLIEYCSLDCQDDCYTMKSGRGEDGLKVNRLTRNVVIRK-SIALRGAGGIVCGTE 306
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYI 99
++GG+ N R K + RGG +EN+ + +
Sbjct: 307 IAGGVRNVYMCDCVFEGTDQAFRFKTRRPRGGFVENVYVERV 348
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 30/110 (27%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEM 72
+V I+ C ++G+D +A+K G + YG PS NI ++ + + + V +GSEM
Sbjct: 364 HVLIDGCTFDTGDDCIAIKAGKDLDTQYG-----PSQNIVIQNCTMQS-GHGAVTLGSEM 417
Query: 73 SGGIFNA---------------------RTKIDKGRGGNIENITIRYIKM 101
+GGI N R K + RGG + N +R I +
Sbjct: 418 AGGIQNVYAQNLVFQNINWATNPLNTAIRLKTNLNRGGYLRNFYVRDISI 467
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S + ++ I +D + +K G + G+ + RP+ ++ ++ S +GV GSE
Sbjct: 232 DSSKKILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDVVLKD-SVVRAGAAGVTFGSE 290
Query: 72 MSGGIFNART---------------KIDKGRGGNIENITIRYIKMERVKIPIRI 110
SGG N K RGG E+I I + ++ V + IR+
Sbjct: 291 TSGGFRNVEAYGITVLKPVPVGILFKSAHTRGGWAEDIRIHDMDLKDVAVAIRV 344
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S + I D I +G+D +++K G A P+ +IT++ + G+ IGSE +
Sbjct: 218 SQYIQISDVDISTGDDNISIKSGLQQ---GNALPARDITIK--NSLMHDGHGISIGSETA 272
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
GI R K + RG +I IT+ +I+ME V PI I
Sbjct: 273 NGIGKVTIQNIHFSGSTNGIRIKSQRDRGNSIGPITVDHIQMENVTNPIVI 323
>gi|414873520|tpg|DAA52077.1| TPA: hypothetical protein ZEAMMB73_569322 [Zea mays]
Length = 441
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWN--HYGIAMARPSSNITMRRV--SGTTPTYSGVGIG 69
S +V + DC I++G+D ++++ G + H P I++ + + SG+ I
Sbjct: 247 SKDVRVTDCKIKTGDDCMSIENGTHNLHVSKVTCGPGHGISIGSLGDDNSRAEVSGITID 306
Query: 70 S-EMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALP 128
S ++ G AR K +G G ++IT + + M VK PI I + + ++
Sbjct: 307 SVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDRAKPCGEQESAV 366
Query: 129 KIRGISFVNVVSVNTIKAPVR 149
++ G+ F N+ + K ++
Sbjct: 367 QVSGVVFKNIRGTTSTKDAIK 387
>gi|357487387|ref|XP_003613981.1| Polygalacturonase [Medicago truncatula]
gi|355515316|gb|AES96939.1| Polygalacturonase [Medicago truncatula]
Length = 400
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIA--MARPSSNITMRRVS--GTTPTYSGVGI- 68
S+N+ I + I++G+D +A+ G N I + P I++ + G T V +
Sbjct: 210 SSNIIINNLSIKTGDDCIAINSGSNFINITGVLCGPGHGISVGSLGKGGEYATVEEVHVK 269
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALP 128
+G AR K KG G IT IK+ VK PI I + N H + +
Sbjct: 270 DCTFTGTTNGARIKTWKGGSGYARKITYENIKLVEVKNPIIINQNYNPHIYDSS--SEVV 327
Query: 129 KIRGISFVNV----VSVNTIK 145
K+ ++F+N+ V+ NT++
Sbjct: 328 KVSDVTFLNIHGTSVNENTVQ 348
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
TNV IE+ G+D +A+K G + G + + + N+ +R + IGSE SG
Sbjct: 259 TNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSETSG 315
Query: 75 GIFNA---RTKIDK-----------GRGGNIENITIRYIKME 102
G+ N KID RGG EN+ +R I+ +
Sbjct: 316 GVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEAD 357
>gi|300693828|ref|YP_003749801.1| polygalacturonase (pectinase) [Ralstonia solanacearum PSI07]
gi|299075865|emb|CBJ35174.1| Polygalacturonase precursor (Pectinase) [Ralstonia solanacearum
PSI07]
Length = 529
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKK-----------GWNH--YGIAMARPS-SNITMRRV 56
T ++NV + YI +G+D VA+K NH YG ++ S +N + +
Sbjct: 288 TGYASNVLLAYSYISAGDDHVAIKSSNSPGASNHTYAHNHFYYGHGLSIGSETNAGVTNI 347
Query: 57 SGTTPTYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPI 108
+ T T G G+ SGG+ R K D RGG + N+T + M V P+
Sbjct: 348 AVTDLTMDGFDSGT--SGGL---RIKSDASRGGKVSNVTYSQVCMRNVSAPL 394
>gi|302774382|ref|XP_002970608.1| hypothetical protein SELMODRAFT_33909 [Selaginella moellendorffii]
gi|300162124|gb|EFJ28738.1| hypothetical protein SELMODRAFT_33909 [Selaginella moellendorffii]
Length = 357
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR--PSSNITMRRV--SGTTPTYSGVGI- 68
STNV + D I +G+D V++ G ++ + R P I++ + G+ T S V +
Sbjct: 182 STNVVVRDADISAGDDCVSIVSGSSNIQVLGGRCGPGHGISIGSLGKGGSYATVSNVQVS 241
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPK--A 126
G ++ R K +G G + N+ I M+ VK PI I + ++ D G K +
Sbjct: 242 GVKIDAATNGVRIKTWQGGKGYVSNVIFENISMDNVKNPIIIDQ---NYCDGGCGKKRGS 298
Query: 127 LPKIRGISFVNVV 139
I+G+++ N+V
Sbjct: 299 SLTIQGVTYSNIV 311
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G AR N+ V G T + G +GSEMS
Sbjct: 288 NALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVV---VDGCTVFKGHGGFVVGSEMS 344
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKM 101
GG+ N R K +GRGG +ENI + + M
Sbjct: 345 GGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSM 386
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 27/154 (17%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSG 74
T+V + YI G+D +A+K G + G P+S++ +R+ + V +GSE++
Sbjct: 285 TDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIPTSDMEVRQCC-MRDGHGAVTVGSEIAA 343
Query: 75 GIFNA--------------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHP 118
G+ + R K +GRG + +++I+ I M+ V P + P
Sbjct: 344 GVKDVHIRDCIFMNTDRGLRVKTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDP 403
Query: 119 DEGRD----PKAL------PKIRGISFVNVVSVN 142
D + KAL P I+ ++F ++ + N
Sbjct: 404 DGKTEYVATSKALPVDDRTPAIKRLTFKDIKATN 437
>gi|242037693|ref|XP_002466241.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
gi|241920095|gb|EER93239.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
Length = 455
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWN--HYGIAMARPSSNITMRRV--SGTTPTYSGVGIG 69
S +V + +C I++G+D ++++ G + H + P I++ + + SG+ I
Sbjct: 243 SKDVRVTNCKIKTGDDCISIEDGTHKLHVSNVVCGPGHGISIGSLGDDNSRAQVSGITID 302
Query: 70 S-EMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALP 128
S ++ G AR K +G G ++IT + + M VK PI I + R+ ++
Sbjct: 303 SVQLHGTTNGARIKTYQGGSGYAKDITFQNMIMYNVKNPIIIDQNYCDKAKPCREQRSAV 362
Query: 129 KIRGISFVNVVSVNTIKAPVR 149
+I + F N+ K ++
Sbjct: 363 QISNVVFKNIRGTTITKDAIK 383
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I G+D +A+K G + PS N+ +R + V IGSEMSGG
Sbjct: 283 DVLIAGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLYIRNCL-MEYGHGAVVIGSEMSGG 341
Query: 76 IFNA--------------RTKIDKGRG--GNIENITIRYIKMERVKIPIRI 110
+ N R K +GRG G I+ I IKME V P I
Sbjct: 342 VKNVHVENCVFKKTDRGIRIKTRRGRGKTGIIDEIHAANIKMEGVLTPFTI 392
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 22 CYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN--- 78
C G+D +A+K G G +P++ T+R + + +GSEM+GG+ N
Sbjct: 282 CRFSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCI-MQFGHGAITLGSEMAGGVKNLSV 340
Query: 79 -----------ARTKIDKGRGGN--IENITIRYIKMERVKIPI 108
R K +GRG + I+ I + IKM+ V PI
Sbjct: 341 SRCIFKETDRGLRIKTRRGRGKDAVIDGIEFKNIKMDGVLTPI 383
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M R G G+ I
Sbjct: 289 NVTISGVRFSVGDDCIAVKAGKRSPDGEDDHLAETRGIRVRHCLMERGHG------GLVI 342
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-- 112
GSEMSGG+ + R K +GRGG + NI +R + ++ V+ +
Sbjct: 343 GSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHY 402
Query: 113 --GSNSHPDEGRDPKALPKIRGISFVNVVSVNTIK 145
++ H + + + P +G F++ + V ++
Sbjct: 403 HCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVE 437
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 320 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGV 378
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 379 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 418
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 334 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGV 392
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 393 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 432
>gi|29349557|ref|NP_813060.1| exo-poly-alpha-D-galacturonosidase, partial [Bacteroides
thetaiotaomicron VPI-5482]
gi|29341467|gb|AAO79254.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 352
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGI--- 68
D S N+ IE+C ++ +D + +K G + G+ + RP+ N+ +R + G G+
Sbjct: 256 DSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCT----ARKGAGLITC 311
Query: 69 GSEMSGGIFN 78
GSE SG I N
Sbjct: 312 GSETSGSIRN 321
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 16 NVCIEDCYIESGNDLVAVKKGW-------NHYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
NV I G+D +AVK G +H + M R G G+ I
Sbjct: 287 NVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIRVRHCLMERGHG------GLVI 340
Query: 69 GSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGR-- 112
GSEMSGG+ + R K +GRGG + NI +R + ++ V+ +
Sbjct: 341 GSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHY 400
Query: 113 --GSNSHPDEGRDPKALPKIRGISFVNVVSVNTIK 145
++ H + + + P +G F++ + V ++
Sbjct: 401 HCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVE 435
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 39.7 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V E+C +G+D +A+K G N YG A N TM G G+ +
Sbjct: 393 DACTDVLCEECTFNTGDDCIAIKSGKNLDTEYGPAKRHLIRNCTMNSGHG------GITL 446
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 447 GSEMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 500
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 334 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGV 392
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 393 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 432
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 334 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGV 392
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 393 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 432
>gi|322711815|gb|EFZ03388.1| hypothetical protein MAA_00462 [Metarhizium anisopliae ARSEF 23]
Length = 229
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRR-VSGTTPTYSGVGIGS 70
D N + D + GND++ +GWN + +++AR S ++ R+ + P +SG
Sbjct: 128 DRLVNTRVSDDKDKEGNDIINSLRGWNQHRVSLARESLDLAKRKFATAFAPEFSG----- 182
Query: 71 EMSGGIFNARTKID 84
E++ I +AR K++
Sbjct: 183 EINQAIDDARAKLN 196
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 334 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGV 392
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 393 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 432
>gi|386080254|ref|YP_005993779.1| endo-polygalacturonase Peh [Pantoea ananatis PA13]
gi|354989435|gb|AER33559.1| endo-polygalacturonase Peh [Pantoea ananatis PA13]
Length = 410
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 28/139 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S++V + + I +G+D VA+K G P+S+I++ ++ G+ IGSE++
Sbjct: 233 SSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQFGFGHGMSIGSEIN 282
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G+ + R K D+ RGG + I + + M+ V P+ + ++H D
Sbjct: 283 RGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDNPVVM----DTHYD 338
Query: 120 EGRDPKALPKIRGISFVNV 138
+P R I+F NV
Sbjct: 339 THASGTMIPDYRDITFDNV 357
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G + YG A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRHLIRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI 76
GSEM GG+
Sbjct: 444 GSEMGGGV 451
>gi|344175341|emb|CCA88010.1| polygalacturonase precursor (Pectinase) [Ralstonia syzygii R24]
Length = 529
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 11 TDLSTNVCIEDCYIESGNDLVAVKK-----------GWNHY----GIAM-ARPSSNITMR 54
T ++NV + YI +G+D VA+K NH+ G+++ + ++ +T
Sbjct: 288 TGYASNVLLAYSYISAGDDHVAIKSSNSPGASNHTYAHNHFYYGHGLSIGSETNAGVTNI 347
Query: 55 RVSGTTPTYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPI 108
V+G T G S SGG+ R K D RGG + N+T + M + P+
Sbjct: 348 AVTGLTMD----GFDSGTSGGL---RIKSDASRGGKVSNVTYSQVCMRNISAPL 394
>gi|291616648|ref|YP_003519390.1| Peh [Pantoea ananatis LMG 20103]
gi|291151678|gb|ADD76262.1| Peh [Pantoea ananatis LMG 20103]
Length = 417
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 28/139 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S++V + + I +G+D VA+K G P+S+I++ ++ G+ IGSE++
Sbjct: 240 SSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQFGFGHGMSIGSEIN 289
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G+ + R K D+ RGG + I + + M+ V P+ + ++H D
Sbjct: 290 RGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDNPVVM----DTHYD 345
Query: 120 EGRDPKALPKIRGISFVNV 138
+P R I+F NV
Sbjct: 346 THASGTMIPDYRDITFDNV 364
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 269 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETAGV 327
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 328 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 367
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 39.3 bits (90), Expect = 0.89, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G + YG A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRHLIRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI 76
GSEM GG+
Sbjct: 444 GSEMGGGV 451
>gi|378768157|ref|YP_005196628.1| Endopolygalacturonase [Pantoea ananatis LMG 5342]
gi|365187641|emb|CCF10591.1| Endopolygalacturonase [Pantoea ananatis LMG 5342]
Length = 417
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 28/139 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S++V + + I +G+D VA+K G P+S+I++ ++ G+ IGSE++
Sbjct: 240 SSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQFGFGHGMSIGSEIN 289
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G+ + R K D+ RGG + I + + M+ V P+ + ++H D
Sbjct: 290 RGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDNPVVM----DTHYD 345
Query: 120 EGRDPKALPKIRGISFVNV 138
+P R I+F NV
Sbjct: 346 THASGTMIPDYRDITFDNV 364
>gi|386015018|ref|YP_005933295.1| endo-polygalacturonase precursor Peh [Pantoea ananatis AJ13355]
gi|327393077|dbj|BAK10499.1| endo-polygalacturonase precursor Peh [Pantoea ananatis AJ13355]
Length = 290
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 28/139 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S++V + + I +G+D VA+K G P+S+I++ ++ G+ IGSE++
Sbjct: 113 SSDVTLINSRISTGDDNVAIKAG--------NAPASHISI--LNNQFGFGHGMSIGSEIN 162
Query: 74 GGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G+ + R K D+ RGG + I + + M+ V P+ + ++H D
Sbjct: 163 RGVSDVLVDGLTLTGTTNGLRIKSDRSRGGQVRAIRYQNVCMQNVDNPVVM----DTHYD 218
Query: 120 EGRDPKALPKIRGISFVNV 138
+P R I+F NV
Sbjct: 219 THASGTMIPDYRDITFDNV 237
>gi|414873518|tpg|DAA52075.1| TPA: hypothetical protein ZEAMMB73_445912 [Zea mays]
Length = 436
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR--PSSNITMRRV--SGTTPTYSGVGIG 69
S +V + DC I++G+D ++++ G ++ ++ P I++ + + SG+ I
Sbjct: 244 SKDVRVTDCKIKTGDDCMSIENGTHNLHVSKVNCGPGHGISIGSLGDDNSRAEVSGITID 303
Query: 70 S-EMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALP 128
S ++ G AR K +G G ++IT + + M VK PI I + + ++
Sbjct: 304 SVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDKAKPCGEQESAV 363
Query: 129 KIRGISFVNVVSVNTIKAPVR 149
++ G+ F N+ + K ++
Sbjct: 364 QVSGVVFKNIRGTTSTKDAIK 384
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 19 IEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFN 78
IE C + G+D + +K G + G + ++ + + + G +GSEMSGG N
Sbjct: 511 IEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCT-VYHAHGGFVVGSEMSGGARN 569
Query: 79 --------------ARTKIDKGRGGNIENITIRYIKMERV 104
R K +GRGG +E I + I M+ +
Sbjct: 570 LFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDI 609
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 237 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETAGV 295
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 296 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 335
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 21/133 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
+V I C+ G+D +A+K G P S+I +R+ + GV IGSE+S G
Sbjct: 282 HVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPGSHIQIRQCF-MENGHGGVTIGSEISSG 340
Query: 76 IFNA--------------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD 119
+ + R K +GRG + ++ + I ME+V P + PD
Sbjct: 341 VHHVTVRDCCFRNTDRGLRIKTRRGRGKSCVVDAVLFENIHMEQVDTPFVLNCFYFCEPD 400
Query: 120 EGRD----PKALP 128
D +ALP
Sbjct: 401 GRSDYVQTKEALP 413
>gi|219566970|dbj|BAH05001.1| polygalacturonase precursor signal peptide protein [Ralstonia
solanacearum]
Length = 531
Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + + YI +G+D VA+K S T + Y G G IGSE
Sbjct: 293 STNVVLANSYISTGDDHVAIKA------------SGGATRNLLFAHNHFYYGHGLSIGSE 340
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
GG+ N R K D RGG + NI I M VK P+
Sbjct: 341 TDGGVSNMQVTDLAMDGNDSSGGNGLRIKSDISRGGKVNNIVYNGICMRNVKEPL 395
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 659 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETAGV 717
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 718 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 757
>gi|17549101|ref|NP_522441.1| polygalacturonase [Ralstonia solanacearum GMI1000]
gi|20138914|sp|P58598.1|PGLR_RALSO RecName: Full=Polygalacturonase; Short=PGA; AltName:
Full=Pectinase; Flags: Precursor
gi|17431352|emb|CAD18031.1| polygalacturonase precursor (pga) (pectinase). signal peptide
protein [Ralstonia solanacearum GMI1000]
Length = 531
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + + YI +G+D VA+K S T + Y G G IGSE
Sbjct: 293 STNVVLANSYISTGDDHVAIKA------------SGGATRNLLFAHNHFYYGHGLSIGSE 340
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
GG+ N R K D RGG + NI I M VK P+
Sbjct: 341 TDGGVSNMQVTDLAMDGNDSSGGNGLRIKSDISRGGKVNNIVYNGICMRNVKEPL 395
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPS------SNITMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K A P NI + + T G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKA-------EKADPRFPDGVVDNIYI--ANNTLKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE +GG+ N R K +G+GG ++NI R KM V++P+
Sbjct: 280 IGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTKMHNVEVPL 334
>gi|449469286|ref|XP_004152352.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 415
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIA--MARPSSNITMRRV--SGTTPTYSGVGI- 68
S++V I +C I +G+D +A+ +G ++ IA P I++ + GT+ + V +
Sbjct: 223 SSHVKIHNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQ 282
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGR 112
+ G ++ AR K +G G I+ + I +++V PI I +
Sbjct: 283 NCHLKGTMYGARIKTWQGGAGYARKISFQGITLDQVHKPILIDQ 326
>gi|440732075|ref|ZP_20912041.1| polygalacturonase [Xanthomonas translucens DAR61454]
gi|440370263|gb|ELQ07192.1| polygalacturonase [Xanthomonas translucens DAR61454]
Length = 558
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 31/155 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV + YI +G+D VA+K H + PS++ M V+ G+ GSE
Sbjct: 304 SRNVLLAYSYISTGDDDVAIKA---HASAKSSNPSTD--MAFVNNQFYYGHGMSFGSETD 358
Query: 74 GGI------------FNA-------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
GI FN+ R K D+ RGG + +IT I M V P+
Sbjct: 359 TGIRRVLVQNLSIDGFNSNDAIKDPAANNGLRIKSDRTRGGQVSDITFENICMRNVARPL 418
Query: 109 RIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNT 143
+ S P A P+ I+ NV S+ +
Sbjct: 419 -VFDAFYSKPANADLGSAYPRFDNITLRNVHSLGS 452
>gi|449484419|ref|XP_004156878.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 415
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIA--MARPSSNITMRRV--SGTTPTYSGVGI- 68
S++V I +C I +G+D +A+ +G ++ IA P I++ + GT+ + V +
Sbjct: 223 SSHVKIHNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQ 282
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGR 112
+ G ++ AR K +G G I+ + I +++V PI I +
Sbjct: 283 NCHLKGTMYGARIKTWQGGAGYARKISFQGITLDQVHKPILIDQ 326
>gi|189459911|ref|ZP_03008696.1| hypothetical protein BACCOP_00544 [Bacteroides coprocola DSM
17136]
gi|189433376|gb|EDV02361.1| hypothetical protein BACCOP_00544 [Bacteroides coprocola DSM
17136]
Length = 236
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
+ + N+ IE+ +G+D VA+K G ++ G RPS NI +R GV +GSE
Sbjct: 27 EYTRNLLIENIEFNNGDDNVAIKCGRDNDGWNTNRPSENIIIRNCK--FKGLHGVVLGSE 84
Query: 72 MSGGIFN 78
MS G+ N
Sbjct: 85 MSSGVQN 91
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 659 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETAGV 717
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 718 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 757
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 659 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETAGV 717
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 718 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 757
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT--PTYSGVGIGSEMS 73
N I + + G+D + +K G + G P N+ V+G T + G +GSEMS
Sbjct: 287 NALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVI---VNGCTVFKGHGGFVVGSEMS 343
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPI 108
GG+ N R K +GRGG +ENI I + M ++ +
Sbjct: 344 GGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDV 392
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA------- 79
G+D +A+K G + PS N+ +R + V IGSEMSGG+ N
Sbjct: 294 GDDCIAIKSGKLSVSQKLPMPSENLIIRNCL-MEYGHGAVVIGSEMSGGVKNVHVENCIF 352
Query: 80 -------RTKIDKGRG--GNIENITIRYIKMERVKIPIRI 110
R K +GRG G I+ I I+ME V P I
Sbjct: 353 RKTDRGIRIKTRRGRGKTGVIDEIHASNIRMEGVLTPFTI 392
>gi|297834448|ref|XP_002885106.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330946|gb|EFH61365.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIA--MARPSSNITMRRV--SGTTPTYSGVGI- 68
S+NV I+DC I +G+D +A+ G ++ I+ P I++ + G T T V +
Sbjct: 196 SSNVVIQDCVIGTGDDCIAINSGTSNIRISGIDCGPGHGISIGSLGKDGETATVENVCVQ 255
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSN-SHPDEGRDPKA 126
G AR K +G G IT I ++ V+ PI I + N D+ +D K+
Sbjct: 256 NCNFRGTTNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQLYNGGDSDKAKDHKS 314
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGG 75
NV IE C + G+D +K G G+ + +P+ N+ + R S + G+ GSE +G
Sbjct: 659 NVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETAGV 717
Query: 76 IFNA--------------RTKIDKGRGGNIENITIRYIKM 101
I N R K + RGG +N ++M
Sbjct: 718 IKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRM 757
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D +NV E+ +G+D +A+K G N YG A N TM G G+ +
Sbjct: 396 DACSNVLCENVTFNTGDDCIAIKSGKNLDTGYGPAQDHVIQNCTMNSGHG------GITL 449
Query: 69 GSEMSGGIFNARTK----IDKGRGGNIENITIR 97
GSEM GG+ N + +++ N NI IR
Sbjct: 450 GSEMGGGVQNIYARNLAMLNQFWATNSLNIAIR 482
>gi|408794773|gb|AFU91401.1| polygalacturonase, partial [uncultured bacterium]
Length = 70
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNART 81
G+D VAVK G + G+ RPS +I + + + GV IGSEMSGG+ R
Sbjct: 1 GDDCVAVKSGKLYMGMKYRRPSDDIEIAWCA-MLDGHGGVTIGSEMSGGVRGVRV 54
>gi|340785525|ref|YP_004750990.1| polygalacturonase (PGA) (Pectinase) [Collimonas fungivorans Ter331]
gi|340550792|gb|AEK60167.1| Polygalacturonase precursor (PGA) (Pectinase) [Collimonas
fungivorans Ter331]
Length = 611
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 31/115 (26%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWN-------------HYGIAMARPS------SNITMR 54
S+NV I Y G+D +A+K + +YG M+ S I MR
Sbjct: 376 SSNVLIAYSYFSGGDDNIAIKASGSAPALSHRIVHSHFYYGHGMSIGSETNSGVDGIEMR 435
Query: 55 RVS-GTTPTYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPI 108
+S + +GVGI R K D GRGG ++N++ R I M VK P+
Sbjct: 436 DLSFDGHDSANGVGI-----------RIKSDDGRGGEVKNVSYRQICMRNVKEPM 479
>gi|302826393|ref|XP_002994681.1| hypothetical protein SELMODRAFT_47881 [Selaginella moellendorffii]
gi|300137166|gb|EFJ04256.1| hypothetical protein SELMODRAFT_47881 [Selaginella moellendorffii]
Length = 338
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR--PSSNITMRRV--SGTTPTYSGVGI- 68
STNV + D I +G+D V++ G ++ + R P I++ + G+ T S V +
Sbjct: 180 STNVVVRDGDISAGDDCVSIVSGSSNIQVLGGRCGPGHGISIGSLGKGGSYATVSNVQVS 239
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPK--A 126
G ++ R K +G G + N+ I M+ VK PI I + ++ D G K +
Sbjct: 240 GVKIDAATNGVRIKTWQGGKGYVSNVIFENISMDNVKNPIIIDQ---NYCDGGCGKKRGS 296
Query: 127 LPKIRGISFVNVV 139
I+G+++ N+V
Sbjct: 297 SLTIQGVTYSNIV 309
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
S N+ + + +G+D +A+K G G A PSSNI + + Y G G +GSE
Sbjct: 234 SKNISLRHLKLSTGDDDIAIKSGLASTG--KAPPSSNINIDDID----IYRGHGLSVGSE 287
Query: 72 MSGGI---------FNA-----RTKIDKGRGGNIENITIRYIKMERVKIPIRI 110
+ GI FN R K + RG I I+ I M V +P+ I
Sbjct: 288 TANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPLVI 340
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 18/145 (12%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D V I+ C + +D +++K G G + +I + + ++ +GIGSE
Sbjct: 244 DSCKGVVIDGCEFVTRDDCISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSE 303
Query: 72 MSGGIFN----------ART-----KIDKGRGGNIENITIRYIKMERVK---IPIRIGRG 113
SGGI N ART K GRG IE+I + +++ + + I
Sbjct: 304 TSGGIRNVHVEHCKCLGARTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNS 363
Query: 114 SNSHPDEGRDPKALPKIRGISFVNV 138
PD +P IR F N+
Sbjct: 364 GLQDPDPVPGDDGIPTIRNFHFSNI 388
>gi|421898620|ref|ZP_16328986.1| polygalacturonase precursor (pga) (pectinase) protein [Ralstonia
solanacearum MolK2]
gi|206589826|emb|CAQ36787.1| polygalacturonase precursor (pga) (pectinase) protein [Ralstonia
solanacearum MolK2]
Length = 535
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 38/121 (31%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VA+K SS T + Y G G IGSE
Sbjct: 291 STNVVLAYSYISTGDDHVAIKA------------SSGATRNLLFAHNHFYYGHGLSIGSE 338
Query: 72 MSGGIFNA------------------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+GG+ N R K D RGG + NI I M V++P
Sbjct: 339 TNGGVSNMLVTDLTMDGNNSSDDNDRSAGNGLRIKSDASRGGKVNNIVYDGICMRNVQVP 398
Query: 108 I 108
+
Sbjct: 399 L 399
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPS------SNITMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K A P NI + + T G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKA-------EKADPRFPDGVVDNIYI--ANNTLKQGRGIS 279
Query: 68 IGSEMSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE +GG+ N R K +G+GG ++NI R +M V++P+
Sbjct: 280 IGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
>gi|433676642|ref|ZP_20508730.1| polygalacturonase [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818241|emb|CCP39042.1| polygalacturonase [Xanthomonas translucens pv. translucens DSM
18974]
Length = 558
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 31/155 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV + YI +G+D VA+K H + PS++ M V+ G+ GSE
Sbjct: 304 SRNVLLAYSYISTGDDDVAIKA---HASAKSSNPSTD--MAFVNNQFYYGHGMSFGSETD 358
Query: 74 GGI------------FNA-------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
GI FN+ R K D+ RGG + +IT I M V P+
Sbjct: 359 TGIRHVLVQNLSIDGFNSNDAIKDPAANNGLRIKSDRTRGGQVSDITFENICMRNVARPL 418
Query: 109 RIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNT 143
+ S P A P+ I+ NV S+ +
Sbjct: 419 -VFDAFYSKPANADLGSAYPRFDNITLRNVHSLGS 452
>gi|386336209|ref|YP_006032379.1| polygalacturonase precursor (pga) (pectinase) protein [Ralstonia
solanacearum Po82]
gi|334198659|gb|AEG71843.1| polygalacturonase precursor (pga) (pectinase) protein [Ralstonia
solanacearum Po82]
Length = 535
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 38/121 (31%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VA+K SS T + Y G G IGSE
Sbjct: 291 STNVVLAYSYISTGDDHVAIKA------------SSGATRNLLFAHNHFYYGHGLSIGSE 338
Query: 72 MSGGIFNA------------------------RTKIDKGRGGNIENITIRYIKMERVKIP 107
+GG+ N R K D RGG + NI I M V++P
Sbjct: 339 TNGGVSNMLVTDLTMDGNNSSDDNDRSAGNGLRIKSDASRGGKVNNIVYDGICMRNVQVP 398
Query: 108 I 108
+
Sbjct: 399 L 399
>gi|424793807|ref|ZP_18219866.1| exported polygalacturonase [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422796350|gb|EKU24873.1| exported polygalacturonase [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 552
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 31/155 (20%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV + YI +G+D VA+K H + PS++ M V+ G+ GSE
Sbjct: 298 SRNVLLAYSYISTGDDNVAIKA---HASAKSSNPSTD--MAFVNNQFYYGHGMSFGSETD 352
Query: 74 GGI------------FNA-------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
GI FN+ R K D+ RGG + +IT I M V P+
Sbjct: 353 TGIHRVQVQNLSIDGFNSNDAIKDPAATNGLRIKSDRTRGGQVSDITFENICMRNVARPL 412
Query: 109 RIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNT 143
+ S P A P+ I+ NV S+ +
Sbjct: 413 -VFDAFYSKPANADLGSAYPRFDNITLRNVHSLGS 446
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Query: 65 GVGIGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
G+ IGSE SGG+ N R K +G+GG ++N+T R+ +M V++P+
Sbjct: 284 GISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPL 341
>gi|297734027|emb|CBI15274.3| unnamed protein product [Vitis vinifera]
Length = 387
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR--PSSNITMRRVS--GTTPTYSGVGI- 68
+ +V IE C I +G+D +++ G H + + P I++ + G + T + +
Sbjct: 191 TASVIIEHCTIGTGDDCISLVDGSTHIDMRHIKCGPGHGISIGSLGKFGLSETVEYIHVK 250
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALP 128
++ +G R K +G G+ N+ I+ + PI I + H + P A+
Sbjct: 251 DAQFTGTTNGVRIKTWQGGRGHARNMIFEKIRSSDSEYPIIIDQFYCDHTECHDKPNAV- 309
Query: 129 KIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFN 170
+IR IS+++V + + V+ I + +V + F+ N
Sbjct: 310 EIRNISYIDVKGTSKKETAVK---IACSDTVPCRDIFIQNIN 348
>gi|445494993|ref|ZP_21462037.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791154|gb|ELX12701.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 624
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 30/111 (27%)
Query: 15 TNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
TNV IEDC+ +G+D +A+ G +G P+ NI ++ + + + +GS
Sbjct: 375 TNVLIEDCHFNTGDDCIAIDSGKGPDIQFG-----PAKNIVIQNCKMQS-GHGALTLGSI 428
Query: 72 MSGGIFN---------------------ARTKIDKGRGGNIENITIRYIKM 101
MSGGI N R K + RGG + N+ +R + +
Sbjct: 429 MSGGIENIYAQNLVFENSYWKTDPLNIAIRLKTNMSRGGYLRNMHVRNVHI 479
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 24 IESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA---- 79
I G+D +A+K G+ + + + +R + G+ IGSEMSGG+ +
Sbjct: 282 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQ 340
Query: 80 ----------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD------EG 121
R K +GRG I+ + R ++M VK P I PD +
Sbjct: 341 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQC 400
Query: 122 RDP----KALPKIRGISFVNVVSVN 142
RD + PK+ ++ ++V+ +
Sbjct: 401 RDAMPVDEYTPKLGSLTMEDIVATD 425
>gi|300728596|ref|ZP_07061954.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774165|gb|EFI70799.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 453
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 28/152 (18%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S N +E ++ G+D +K G G+ RP+ NI +R G IGSE
Sbjct: 260 DSSRNGLVEYTTLDCGDDCFTLKSGRGMDGVKRNRPTENIVIRHCK-VVNAAGGFTIGSE 318
Query: 72 MSGGI--------------FNARTKIDKGRGGNIENITIRYIKMERVKI----------P 107
+ I F K + RGG EN+ + I ++ K P
Sbjct: 319 TAAMIRNVYVYDIEMEHPRFALYFKSRRPRGGGAENVWMENIHAKQTKYTAIKWDLLGSP 378
Query: 108 IRIGRGSNSHPDEGRDPKAL-PKIRGISFVNV 138
+G+ + ++P AL PK R I F N+
Sbjct: 379 EYVGKLAERFA--VKEPNALTPKFRNIHFKNI 408
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 23/126 (18%)
Query: 24 IESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA---- 79
I G+D +A+K G+ + + + +R + G+ IGSEMSGG+ +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQ 348
Query: 80 ----------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPDEGRDP--- 124
R K +GRG I+ + R ++M VK P I PD G P
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD-GHSPYVQ 407
Query: 125 --KALP 128
+ALP
Sbjct: 408 CREALP 413
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 27 GNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA------- 79
G+D +A+K G + G + S +I +R + G+ IGSEM+GG+ N
Sbjct: 295 GDDCIAIKSGKLYLGQRLKIASQDIMIRNCH-MKFGHGGIVIGSEMAGGVKNVSAIRCIF 353
Query: 80 -------RTKIDKGRG--GNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
R K +GRG G I I I M++V P I PD
Sbjct: 354 EETDRGIRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPD 402
>gi|344170411|emb|CCA82827.1| polygalacturonase precursor (pectinase) [blood disease bacterium
R229]
Length = 530
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VAVK SS T + Y G G IGSE
Sbjct: 292 STNVVLAYSYISTGDDHVAVKA------------SSGATRNLLFAHNHFYYGHGLSIGSE 339
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
+ G+ N R K D RGG + NI I M VK P+
Sbjct: 340 TNAGVSNMLVTDLTMDGNDSSSGNGLRIKSDVSRGGKVNNIVYDGICMRNVKAPL 394
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Query: 65 GVGIGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
G+ IGSE SGG+ N R K +G+GG ++N+T R+ +M V++P+
Sbjct: 284 GISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPL 341
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Query: 65 GVGIGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
G+ IGSE SGG+ N R K +G+GG ++N+T R+ +M V++P+
Sbjct: 274 GISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPL 331
>gi|300693827|ref|YP_003749800.1| polygalacturonase (pectinase) [Ralstonia solanacearum PSI07]
gi|299075864|emb|CBJ35173.1| Polygalacturonase precursor (pectinase) [Ralstonia solanacearum
PSI07]
Length = 530
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VAVK SS T + Y G G IGSE
Sbjct: 292 STNVVLAYSYISTGDDHVAVKA------------SSGATRNLLFAHNHFYYGHGLSIGSE 339
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
+ G+ N R K D RGG + NI I M VK P+
Sbjct: 340 TNAGVSNMLVTDLTMDGNDSSSGNGLRIKSDVSRGGKVNNIVYDGICMRNVKAPL 394
>gi|344175340|emb|CCA88009.1| polygalacturonase precursor (pectinase) [Ralstonia syzygii R24]
Length = 530
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VAVK SS T + Y G G IGSE
Sbjct: 292 STNVVLAYSYISTGDDHVAVKA------------SSGATRNLLFAHNHFYYGHGLSIGSE 339
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
+ G+ N R K D RGG + NI I M VK P+
Sbjct: 340 TNAGVSNMLVTDLTMDGNDSASGNGLRIKSDVSRGGKVNNIVYDGICMRNVKAPL 394
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 24 IESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNA---- 79
I G+D +A+K G+ + + + +R + G+ IGSEMSGG+ +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LDKGHGGIVIGSEMSGGVKDMVVTQ 348
Query: 80 ----------RTKIDKGRGGN--IENITIRYIKMERVKIPIRIGRGSNSHPD------EG 121
R K +GRG I+ + R ++M VK P I PD +
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYFCDPDGHSPYVQC 408
Query: 122 RDP----KALPKIRGISFVNVVSVN 142
RD + PK+ ++ ++V+ +
Sbjct: 409 RDAMPVDEYTPKLGSLTMEDIVATD 433
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPS------SNITMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K A P NI + + T G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKA-------EKADPRFPDGVVDNIYI--ANNTLKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE +GG+ N R K +G+GG ++NI R +M V++P+
Sbjct: 280 IGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 30/114 (26%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D T+V EDC +G+D +A+K G N G A N TM G G+ +
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRDTESGPAKRHLVRNCTMNSGHG------GITL 443
Query: 69 GSEMSGGI----------FNA-----------RTKIDKGRGGNIENITIRYIKM 101
GSEM GG+ NA R K + RGG +++ ++ + +
Sbjct: 444 GSEMGGGVEQVYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSL 497
>gi|170782526|ref|YP_001710859.1| endo-polygalacturonase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157095|emb|CAQ02272.1| endo-polygalacturonase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 507
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 48/158 (30%)
Query: 16 NVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYS-GVGIGSEMSG 74
+V I D YI G+D +A+K A PS++IT+R G T T + G+ +G + +
Sbjct: 300 DVTIADSYIMDGDDGIAIK--------ASDAPSAHITIR---GNTLTGTHGISLGRQTTA 348
Query: 75 GIFNA-----------------------RTKIDKGRGGNIENITIRYIKMERVKIPI--- 108
GI + R K GG + +IT R ++ VK P+
Sbjct: 349 GISDVLIDGNTISGKDRYGNQSVAAGGIRIKSSAAAGGLVRDITFRDTCIDLVKAPVVFD 408
Query: 109 -RIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIK 145
R GS +H +P GI + + N++K
Sbjct: 409 SRYESGSGTH---------IPSFTGIVVDGLRATNSVK 437
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPS------SNITMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K A P NI + + T G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKA-------EKADPRFPEGVVDNIYI--ANNTLKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE +GG+ N R K +G+GG ++NI R +M V++P+
Sbjct: 280 IGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
>gi|359491344|ref|XP_002267182.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 771
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMAR--PSSNITMRRVS--GTTPTYSGVGI- 68
+ +V IE C I +G+D +++ G H + + P I++ + G + T + +
Sbjct: 200 TASVIIEHCTIGTGDDCISLVDGSTHIDMRHIKCGPGHGISIGSLGKFGLSETVEYIHVK 259
Query: 69 GSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALP 128
++ +G R K +G G+ N+ I+ + PI I + H + P A+
Sbjct: 260 DAQFTGTTNGVRIKTWQGGRGHARNMIFEKIRSSDSEYPIIIDQFYCDHTECHDKPNAV- 318
Query: 129 KIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFN 170
+IR IS+++V + + V+ I + +V + F+ N
Sbjct: 319 EIRNISYIDVKGTSKKETAVK---IACSDTVPCRDIFIQNIN 357
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPS------SNITMRRVSGTTPTYSGVG 67
S N+ I + YI+ +D +A+K A P NI + + T G+
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKA-------EKADPRFPEGVVDNIYI--ANNTLKQGRGIS 279
Query: 68 IGSEMSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
IGSE +GG+ N R K +G+GG ++NI R +M V++P+
Sbjct: 280 IGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEVPL 334
>gi|83747833|ref|ZP_00944866.1| PglA [Ralstonia solanacearum UW551]
gi|83725480|gb|EAP72625.1| PglA [Ralstonia solanacearum UW551]
Length = 529
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VAVK A P+ N+ Y G G IGSE
Sbjct: 291 STNVVLAYSYINTGDDHVAVK--------ASTGPTRNLLFAH----NHFYYGHGLSIGSE 338
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
+ G+ N R K D RGG + NI I M VK P+
Sbjct: 339 TNTGVSNMLVTDLTMDGNDSSAGNGLRIKSDASRGGKVSNIVYDGICMRNVKAPL 393
>gi|207739245|ref|YP_002257638.1| polygalacturonase precursor (pga) (pectinase) protein [Ralstonia
solanacearum IPO1609]
gi|206592618|emb|CAQ59524.1| polygalacturonase precursor (pga) (pectinase) protein [Ralstonia
solanacearum IPO1609]
Length = 529
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 32/115 (27%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVG--IGSE 71
STNV + YI +G+D VAVK A P+ N+ Y G G IGSE
Sbjct: 291 STNVVLAYSYINTGDDHVAVK--------ASTGPTRNLLFAH----NHFYYGHGLSIGSE 338
Query: 72 MSGGIFNA------------------RTKIDKGRGGNIENITIRYIKMERVKIPI 108
+ G+ N R K D RGG + NI I M VK P+
Sbjct: 339 TNTGVSNMLVTDLTMDGNDSSAGNGLRIKSDASRGGKVSNIVYDGICMRNVKAPL 393
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S NV IE C + G+D +K G G+ + +P+ N+ +R + G+ +GSE +
Sbjct: 283 SKNVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTENVVVRFCLAKE-GHGGITVGSETA 341
Query: 74 GGIFN 78
I N
Sbjct: 342 AKINN 346
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 31/164 (18%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
S +V + I +G+D +A+K G G A++ S IT R G+ IGSE++
Sbjct: 215 SDHVTMSTLDIATGDDNIAIKSGLRQPGRAVSDIS--ITQSRFG----EGHGLSIGSELA 268
Query: 74 GGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPD 119
G + R K + RGG+I I+ ++ M V+ P+ I P
Sbjct: 269 NGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQPG 328
Query: 120 EGR------DPKA-----LPKIRGISFVNVVSVNTIKAPVRAGI 152
+ DP A P I ++ ++ + N A V G+
Sbjct: 329 GTQKTVSMTDPAAPVTSTTPHIHDVTITDLTAKNAETAGVVLGL 372
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGI 68
D NV + +G+D +A+K G + YG A N TM G G+ +
Sbjct: 398 DACNNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNHVVQNCTMNSGHG------GITL 451
Query: 69 GSEMSGGIFN--AR--TKIDKGRGGNIENITIR 97
GSEM GGI N AR T +++ N NI IR
Sbjct: 452 GSEMGGGIENVYARNLTMLNQFWATNSLNIAIR 484
>gi|427404324|ref|ZP_18895064.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
gi|425717175|gb|EKU80141.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
Length = 619
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 30/109 (27%)
Query: 17 VCIEDCYIESGNDLVAVKKGWN---HYGIAMARPSSNITMRRVSGTTPTYSGVGIGSEMS 73
V ++DC +G+D +A+K G N +G P+ N+ +R + + GV +GSEM+
Sbjct: 370 VLVDDCLFNNGDDCIAIKAGKNLDTGHG-----PTRNVVIRNCVMNS-GHGGVTLGSEMA 423
Query: 74 GGIFNA---------------------RTKIDKGRGGNIENITIRYIKM 101
GGI + R K + RGG + ++ +R + +
Sbjct: 424 GGIEHVYAEKLEFRNIHWKDDPLNTAIRLKTNMNRGGFLRHLYVRDVTL 472
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,406,971,237
Number of Sequences: 23463169
Number of extensions: 142318055
Number of successful extensions: 275070
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 696
Number of HSP's that attempted gapping in prelim test: 273089
Number of HSP's gapped (non-prelim): 1179
length of query: 209
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 73
effective length of database: 9,168,204,383
effective search space: 669278919959
effective search space used: 669278919959
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)