Query 036909
Match_columns 100
No_of_seqs 118 out of 648
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 10:47:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036909.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036909hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nz0_B Potassium voltage-gated 62.8 9.7 0.00033 26.2 4.1 62 33-99 33-95 (140)
2 1und_A Advillin, P92; actin bi 60.9 3.1 0.00011 23.2 1.0 19 54-72 1-19 (37)
3 1pzq_A Erythronolide synthase; 60.6 7 0.00024 23.6 2.7 16 9-24 35-50 (60)
4 3drz_A BTB/POZ domain-containi 59.4 32 0.0011 22.0 6.1 60 34-98 5-69 (107)
5 1s1g_A Potassium voltage-gated 56.6 9.8 0.00033 25.6 3.2 63 32-99 10-73 (124)
6 2vpk_A Myoneurin; transcriptio 54.5 23 0.00078 22.0 4.6 50 37-97 25-79 (116)
7 1r29_A B-cell lymphoma 6 prote 48.8 24 0.00082 22.3 4.0 53 37-97 32-88 (127)
8 3ga1_A Nucleus accumbens-assoc 45.8 41 0.0014 21.3 4.9 50 37-97 36-89 (129)
9 1nn7_A Potassium channel KV4.2 45.1 6.1 0.00021 25.7 0.7 58 37-99 2-60 (105)
10 2xko_C PIPX, global nitrogen r 43.9 2.9 9.8E-05 27.7 -1.1 12 54-65 5-16 (89)
11 2if5_A Zinc finger and BTB dom 43.5 47 0.0016 20.6 4.8 54 37-97 28-84 (120)
12 2al3_A TUG long isoform; TUG U 43.2 30 0.001 22.6 3.8 34 46-81 19-52 (90)
13 2vkp_A BTB/POZ domain-containi 41.4 56 0.0019 19.7 4.8 56 37-97 11-70 (109)
14 4a26_A Putative C-1-tetrahydro 38.5 76 0.0026 24.5 6.1 55 32-99 36-92 (300)
15 1y74_B MLIN-2/CASK, peripheral 38.2 13 0.00044 21.0 1.3 20 54-73 26-49 (50)
16 1w8x_N Protein P31, protein C, 37.7 8.5 0.00029 26.6 0.4 28 33-62 86-123 (126)
17 1yu8_X Villin; alpha helix, 3- 37.2 12 0.00041 23.3 1.0 20 54-73 31-50 (67)
18 4b4u_A Bifunctional protein fo 36.6 95 0.0032 24.1 6.3 55 32-99 52-108 (303)
19 1qzp_A Dematin; villin headpie 33.7 10 0.00036 23.5 0.4 20 54-73 32-51 (68)
20 1ujs_A Actin-binding LIM prote 32.9 15 0.00052 24.0 1.1 20 54-73 46-65 (88)
21 3b84_A Zinc finger and BTB dom 32.8 74 0.0025 19.8 4.4 50 37-97 27-79 (119)
22 2ccq_A P97, peptide N-glycanas 32.6 43 0.0015 21.7 3.3 44 55-98 45-96 (99)
23 3htm_A Speckle-type POZ protei 31.8 67 0.0023 20.8 4.2 54 37-97 37-93 (172)
24 2k6m_S Supervillin; SVHP, HP, 31.4 13 0.00045 23.0 0.5 20 54-73 31-50 (67)
25 3n5b_B ASR0485 protein; PII, P 31.4 6 0.00021 27.2 -1.1 13 54-66 28-40 (112)
26 1b0a_A Protein (fold bifunctio 30.8 1.8E+02 0.0062 22.3 7.6 55 32-99 32-88 (288)
27 3ohu_A Transcription regulator 30.3 54 0.0018 20.5 3.4 52 37-97 35-90 (125)
28 3p2o_A Bifunctional protein fo 30.0 1.8E+02 0.0063 22.1 7.3 54 33-99 33-88 (285)
29 1z3x_A Putative cytidyltransfe 29.3 2.3 7.9E-05 32.5 -3.9 29 30-61 208-236 (238)
30 1y6i_A Mg-chelatase cofactor G 28.4 3.1 0.00011 31.6 -3.3 30 30-62 200-229 (233)
31 1a4i_A Methylenetetrahydrofola 26.9 1.5E+02 0.0052 22.8 6.0 55 32-99 34-90 (301)
32 2q81_A MIZ-1 protein; BTB/POZ 26.1 92 0.0031 19.4 4.0 49 37-97 30-81 (119)
33 3qli_A Coenzyme A transferase; 25.1 40 0.0014 27.6 2.5 44 30-74 402-454 (455)
34 4eoz_A Speckle-type POZ protei 24.3 79 0.0027 19.9 3.4 54 37-97 28-84 (145)
35 1wy3_A Villin; structural prot 24.3 27 0.00092 19.0 0.9 17 56-72 1-17 (35)
36 1zav_U 50S ribosomal protein L 24.2 46 0.0016 17.4 1.9 13 61-73 18-30 (30)
37 3fkc_A Transcriptional regulat 23.4 1.1E+02 0.0037 19.1 3.9 49 37-97 34-85 (116)
38 1buo_A POZ domain, protein (pr 22.6 1.2E+02 0.0041 18.8 4.1 49 37-97 31-82 (121)
39 2ihc_A Transcription regulator 22.6 1.1E+02 0.0039 19.0 3.9 52 37-97 32-87 (124)
40 3ezo_A Malonyl COA-acyl carrie 22.4 51 0.0018 24.7 2.5 40 35-75 10-49 (318)
41 3kvt_A Potassium channel prote 22.3 21 0.00072 23.6 0.3 58 35-98 5-65 (115)
42 2ppi_A Gigaxonin; BTB domain, 21.9 1.4E+02 0.0049 19.3 4.4 56 37-97 50-108 (144)
43 3drx_A BTB/POZ domain-containi 21.5 1E+02 0.0036 22.5 4.0 61 33-98 10-75 (202)
44 2d5u_A N-glycanase 1; pngase, 21.4 73 0.0025 21.5 2.9 44 55-98 60-111 (124)
45 3ngx_A Bifunctional protein fo 21.0 2.8E+02 0.0095 21.1 8.1 54 32-99 26-81 (276)
46 3pmi_A PWWP domain-containing 20.1 34 0.0012 24.0 1.0 29 45-73 47-78 (134)
No 1
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=62.79 E-value=9.7 Score=26.24 Aligned_cols=62 Identities=21% Similarity=0.252 Sum_probs=44.7
Q ss_pred CCCeEEEEEcCCCceEEEEecccc-CcHHHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909 33 PKGFLAVYVGETQRKRFLVPVSYL-NQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99 (100)
Q Consensus 33 pkG~~aVyVG~~~~~RfvVp~~~L-~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~ 99 (100)
....+.+-||. .||.+..+-| ++|. .+|..+....-++.++|.+-|-.|-..|++||..++.
T Consensus 33 ~~~~V~LNVGG---~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~ 95 (140)
T 2nz0_B 33 QDELIVLNVSG---RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 95 (140)
T ss_dssp CCCEEEEEETT---EEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECC---EEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhc
Confidence 45788889996 7999988766 3332 2333344444455556899999999999999998763
No 2
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=60.91 E-value=3.1 Score=23.19 Aligned_cols=19 Identities=21% Similarity=0.483 Sum_probs=17.1
Q ss_pred cccCcHHHHHHHHhhHHhc
Q 036909 54 SYLNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEf 72 (100)
.||+.-.|.+++.++.+||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF 19 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQF 19 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHH
T ss_pred CCCCHHHHHHHHCcCHHHH
Confidence 4899999999999999998
No 3
>1pzq_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.34.3.1
Probab=60.64 E-value=7 Score=23.64 Aligned_cols=16 Identities=13% Similarity=0.058 Sum_probs=13.0
Q ss_pred HHHHHHHHHhhhhhhc
Q 036909 9 ILAKQILRQSALTAKK 24 (100)
Q Consensus 9 ~~~k~~l~r~~~~~~~ 24 (100)
.++..+||||+|+...
T Consensus 35 qrlesllrrwnsrrad 50 (60)
T 1pzq_A 35 QRLESLLRRWNSRRAD 50 (60)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcccC
Confidence 4788999999998543
No 4
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=59.39 E-value=32 Score=21.99 Aligned_cols=60 Identities=18% Similarity=0.287 Sum_probs=43.2
Q ss_pred CCeEEEEEcCCCceEEEEeccccC-cH--HHHHHHHhhHHhcC--CccCCCceeeeCcHHHHHHHHHHhh
Q 036909 34 KGFLAVYVGETQRKRFLVPVSYLN-QP--LFQDLLSRAEEEFG--FNHPMGGLTIPCEENTFIDITSRLE 98 (100)
Q Consensus 34 kG~~aVyVG~~~~~RfvVp~~~L~-hP--~F~~LL~~aeEEfG--~~~~~G~L~IPC~~~~F~~vl~~l~ 98 (100)
...+.+-||. ++|.+..+-|. +| .|..|.... .++. .+. +|.+-|-.+...|++|+..++
T Consensus 5 ~~~v~LNVGG---~~f~t~~~TL~~~p~s~L~~~~~~~-~~~~~~~d~-~~~~fiDRdp~~F~~IL~~lr 69 (107)
T 3drz_A 5 SKWVRLNVGG---TYFLTTRQTLCRDPKSFLYRLCQAD-PDLDSDKDE-TGAYLIDRDPTYFGPVLNYLR 69 (107)
T ss_dssp CCEEEEEETT---EEEEEEHHHHTSSTTSHHHHHHTTC-GGGGGGBCT-TSCEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEEECC---EEEEECHHHHhcCCCcchhHHHhcC-CCCCcCCCC-CceEEecCChHHHHHHHHHhC
Confidence 4578889995 79999988775 34 566664321 2332 233 488999999999999999875
No 5
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=56.58 E-value=9.8 Score=25.62 Aligned_cols=63 Identities=21% Similarity=0.240 Sum_probs=44.3
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccC-cHHHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLN-QPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~-hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~ 99 (100)
.....+.+-||. .||.+..+-|. +|- .+|..++...-++.+.|.+-|-.+...|++||..++.
T Consensus 10 ~~~~~V~LNVGG---~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~ 73 (124)
T 1s1g_A 10 RQDELIVLNVSG---RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 73 (124)
T ss_dssp --CCEEEEEETT---EEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCC---EEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhc
Confidence 345788889996 79999988763 332 2333344444455456899999999999999998764
No 6
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=54.50 E-value=23 Score=22.04 Aligned_cols=50 Identities=12% Similarity=0.240 Sum_probs=37.5
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee---CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP---CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP---C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++... . + ..+.|+ .+.+.|+.++..+
T Consensus 25 v~l~v~~---~~~~aHk~vLaa~S~yF~~~f~~~------~-~-~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 25 CTIVIGE---FQFKAHRNVLASFSEYFGAIYRST------S-E-NNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTC------C-C-SCEECCTTTCCHHHHHHHHHHH
T ss_pred EEEEECC---EEEeccHHHHhhcCHHHHHHHcCC------C-C-CeEEeecCCCCHHHHHHHHHHH
Confidence 3456664 6888887777 578999998765 2 3 578888 7899999998865
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=48.82 E-value=24 Score=22.30 Aligned_cols=53 Identities=13% Similarity=0.249 Sum_probs=39.6
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceee-e-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTI-P-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~I-P-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++...-.| .. ..|.| + .+.+.|+.++..+
T Consensus 32 v~l~v~~---~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~-~~i~l~~~~~~~~f~~ll~~~ 88 (127)
T 1r29_A 32 VVIVVSR---EQFRAHKTVLMACSGLFYSIFTDQLKR----NL-SVINLDPEINPEGFNILLDFM 88 (127)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTSTTTT----TC-SEEECCTTSCHHHHHHHHHHH
T ss_pred EEEEECC---EEEehHHHHHHHhCHHHHHHhcCCccC----CC-CEEEeCCCCCHHHHHHHHHHH
Confidence 4455664 6788887777 679999999865555 23 68999 4 6889999998865
No 8
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=45.82 E-value=41 Score=21.32 Aligned_cols=50 Identities=22% Similarity=0.363 Sum_probs=37.8
Q ss_pred EEEEEcCCCceEEEEeccccC--cHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYLN--QPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L~--hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..|. .|.|++++... .. ..|.|| .+.+.|+.++..+
T Consensus 36 v~l~v~~---~~~~~Hk~vLaa~S~~F~~~f~~~-------~~-~~i~l~~~~~~~~f~~ll~~i 89 (129)
T 3ga1_A 36 VSVVVKG---HAFKAHRAVLAASSSYFRDLFNNS-------RS-AVVELPAAVQPQSFQQILSFC 89 (129)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHHHC-------CC-SEEECCTTCCHHHHHHHHHHH
T ss_pred eEEEECC---EEEEehHHHHHHcCHHHHHHHcCC-------CC-CEEEECCCCCHHHHHHHHHHH
Confidence 4566764 67877766664 68899998775 23 689997 8999999999865
No 9
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=45.13 E-value=6.1 Score=25.71 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=38.1
Q ss_pred EEEEEcCCCceEEEEecccc-CcHHHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909 37 LAVYVGETQRKRFLVPVSYL-NQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L-~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~ 99 (100)
+.+-||. .||.+..+-| ++|- .+|..++...-++.+.|.+-|-.+...|++||..++.
T Consensus 2 V~LNVGG---~~f~t~~~TL~~~p~--s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~ 60 (105)
T 1nn7_A 2 IVLNVSG---TRFQTWQDTLERYPD--TLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRT 60 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCS--SSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCC--ccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhc
Confidence 4566885 7899887765 3332 1232233333344445899999999999999998753
No 10
>2xko_C PIPX, global nitrogen regulator; transcription, nitrogen assimilation, CRP/FNR superfamily, 2-oxoglutarate, global nitrogen controller; HET: AKG; 2.25A {Synechococcus elongatus} PDB: 2xg8_D*
Probab=43.87 E-value=2.9 Score=27.75 Aligned_cols=12 Identities=50% Similarity=0.833 Sum_probs=9.3
Q ss_pred cccCcHHHHHHH
Q 036909 54 SYLNQPLFQDLL 65 (100)
Q Consensus 54 ~~L~hP~F~~LL 65 (100)
.|||||.|.-|-
T Consensus 5 ~YLNHPtFGlLy 16 (89)
T 2xko_C 5 NYLNHPTFGLLY 16 (89)
T ss_dssp CEEEETTTEEEE
T ss_pred ccccCCccchhh
Confidence 499999986553
No 11
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=43.54 E-value=47 Score=20.57 Aligned_cols=54 Identities=13% Similarity=0.202 Sum_probs=36.9
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++...-.| ... ..|.|+ .+.+.|+.++..+
T Consensus 28 v~l~v~~---~~~~aHk~vLaa~S~~F~~~f~~~~~e---~~~-~~i~l~~~~~~~f~~ll~~~ 84 (120)
T 2if5_A 28 VVILVEG---REFPTHRSVLAACSQYFKKLFTSGAVV---DQQ-NVYEIDFVSAEALTALMDFA 84 (120)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHC--------CC-SEEECCSSCHHHHHHHHHHH
T ss_pred eEEEECC---EEEeHHHHHHHHhCHHHHHHhcCCccc---cCC-ceEEeCCCCHHHHHHHHHHH
Confidence 3455664 6888887777 479999999754333 223 578898 6889999998865
No 12
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=43.20 E-value=30 Score=22.58 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=25.7
Q ss_pred ceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCce
Q 036909 46 RKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGL 81 (100)
Q Consensus 46 ~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L 81 (100)
-+|+.|++. ..-.+.++|++|=+.||++.+...|
T Consensus 19 ~rr~~VKvt--p~t~L~~VL~eaC~K~gl~~~~~~L 52 (90)
T 2al3_A 19 GRRHTVKVT--PSTVLLQVLEDTCRRQDFNPSEYDL 52 (90)
T ss_dssp SCEEEECCC--TTSBHHHHHHHHHHHTTCCGGGCEE
T ss_pred CcEEEEEEC--CCCCHHHHHHHHHHHhCCChhhCeE
Confidence 389999883 3346889999999999998654434
No 13
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=41.40 E-value=56 Score=19.73 Aligned_cols=56 Identities=16% Similarity=0.256 Sum_probs=37.8
Q ss_pred EEEEEcCC-CceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGET-QRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~-~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||++ +.++|-+.-..| ..|.|++++...-.|-. ..|.|| .+.+.|+.++..+
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-----~~i~l~~~~~~~f~~~l~~i 70 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-----SEIHIPDVEPAAFLILLKYM 70 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-----CEEEETTSCHHHHHHHHHHH
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-----CeEEeCCCCHHHHHHHHHHH
Confidence 44566652 247888888887 58999999975433321 468887 6899999998865
No 14
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=38.48 E-value=76 Score=24.51 Aligned_cols=55 Identities=16% Similarity=0.314 Sum_probs=39.7
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
.+.|-..|.||++. ..-....--.++.+|.|++.. .+.+| ++.+++...+..++.
T Consensus 36 ~~P~Lavilvg~dp-----------aS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 92 (300)
T 4a26_A 36 RVPGLASIIVGQRM-----------DSKKYVQLKHKAAAEVGMASF--NVELPEDISQEVLEVNVEKLNN 92 (300)
T ss_dssp CCCEEEEEEESCCH-----------HHHHHHHHHHHHHHHTTCEEE--EEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeCCCH-----------HHHHHHHHHHHHHHHcCCeEE--EEECCCCCCHHHHHHHHHHhcC
Confidence 45588899999841 012345567788899999875 67886 677888888887764
No 15
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=38.23 E-value=13 Score=21.05 Aligned_cols=20 Identities=40% Similarity=0.595 Sum_probs=15.0
Q ss_pred cccCcHHHHHHHHh----hHHhcC
Q 036909 54 SYLNQPLFQDLLSR----AEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~----aeEEfG 73 (100)
..|+.|-|++||+- |.++||
T Consensus 26 ~lL~~PHfqaLl~ahD~Va~~~y~ 49 (50)
T 1y74_B 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhc
Confidence 46788999999974 456664
No 16
>1w8x_N Protein P31, protein C, GPC; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=37.68 E-value=8.5 Score=26.57 Aligned_cols=28 Identities=32% Similarity=0.680 Sum_probs=17.9
Q ss_pred CCCeEEEEEcCCCceEEE----------EeccccCcHHHH
Q 036909 33 PKGFLAVYVGETQRKRFL----------VPVSYLNQPLFQ 62 (100)
Q Consensus 33 pkG~~aVyVG~~~~~Rfv----------Vp~~~L~hP~F~ 62 (100)
..||+|+.|-. +.+|+ +|+-|||.|+-+
T Consensus 86 ~QGYfPlL~~~--~~KFv~~~~~~GKks~P~~FlNF~IA~ 123 (126)
T 1w8x_N 86 KQGYFPLLVPG--RAKFVARHLGSGKKSVPLFFLNFTIAQ 123 (126)
T ss_dssp CCSSCCEEECC--SSSSEEEEEEEESSCCCCSCCC-----
T ss_pred Ccccceeeccc--hhhhhhhhhcCCCcceeeEEEeceeee
Confidence 57999999965 35666 688899988643
No 17
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=37.23 E-value=12 Score=23.28 Aligned_cols=20 Identities=15% Similarity=0.325 Sum_probs=18.5
Q ss_pred cccCcHHHHHHHHhhHHhcC
Q 036909 54 SYLNQPLFQDLLSRAEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEfG 73 (100)
.||+.-.|.+++.|+.+||-
T Consensus 31 ~yLsdedF~~vFgms~~eF~ 50 (67)
T 1yu8_X 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 18
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=36.58 E-value=95 Score=24.12 Aligned_cols=55 Identities=11% Similarity=0.256 Sum_probs=40.1
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
.+.|-..|.||++. . .-....--.++.||.|+... .+.+| ++.+++...+..|+.
T Consensus 52 ~~P~LavIlVG~dp-------a----S~~Yv~~K~k~c~~vGi~s~--~~~lp~~~se~ell~~I~~LN~ 108 (303)
T 4b4u_A 52 RTPILATILVGDDG-------A----SATYVRMKGNACRRVGMDSL--KIELPQETTTEQLLAEIEKLNA 108 (303)
T ss_dssp CCCEEEEEEESCCH-------H----HHHHHHHHHHHHHHTTCEEE--EEEECTTCCHHHHHHHHHHHHT
T ss_pred CCCcEEEEEeCCCH-------H----HHHHHHHHHHHHHHcCCeEE--EEecCccCCHHHHHHHHHHhcC
Confidence 56688999999841 0 12244566788899999865 57787 778888888888764
No 19
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=33.65 E-value=10 Score=23.48 Aligned_cols=20 Identities=30% Similarity=0.489 Sum_probs=18.4
Q ss_pred cccCcHHHHHHHHhhHHhcC
Q 036909 54 SYLNQPLFQDLLSRAEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEfG 73 (100)
.||+.-.|.+++.|+.+||-
T Consensus 32 ~yLsdedF~~vFgmsr~eF~ 51 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEFG 51 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 20
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=32.87 E-value=15 Score=23.98 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=18.6
Q ss_pred cccCcHHHHHHHHhhHHhcC
Q 036909 54 SYLNQPLFQDLLSRAEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.|+.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T 1ujs_A 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 21
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=32.79 E-value=74 Score=19.81 Aligned_cols=50 Identities=22% Similarity=0.218 Sum_probs=36.2
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++... . + ..|.|| .+.+.|+.++..+
T Consensus 27 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~~-----~--~-~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 27 ATLDVGG---LVFKAHWSVLACCSHFFQSLYGDG-----S--G-GSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTT-----T--C-CCEEECGGGHHHHHHHHHHH
T ss_pred eEEEECC---EEEEeeHHHHhhcCHHHHHHHCCC-----C--C-CeEEeCCCCHHHHHHHHHHH
Confidence 3455664 6788777766 478999998752 2 3 579998 5688999998865
No 22
>2ccq_A P97, peptide N-glycanase homolog; glycoprotein; 1.6A {Homo sapiens} SCOP: d.314.1.1 PDB: 2hpl_A 2hpj_A 2cm0_A
Probab=32.64 E-value=43 Score=21.67 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=31.0
Q ss_pred ccCcHHHHHHHHhhH------HhcCCccCCCceeee--CcHHHHHHHHHHhh
Q 036909 55 YLNQPLFQDLLSRAE------EEFGFNHPMGGLTIP--CEENTFIDITSRLE 98 (100)
Q Consensus 55 ~L~hP~F~~LL~~ae------EEfG~~~~~G~L~IP--C~~~~F~~vl~~l~ 98 (100)
-+++|.|++=+-..+ +..||...++.|.+| +++...+++...|.
T Consensus 45 r~~N~~f~~~v~~~~G~~e~L~a~GF~~~~~~l~lp~~~~~~~l~~~~d~l~ 96 (99)
T 2ccq_A 45 RIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIA 96 (99)
T ss_dssp ETTCHHHHHHTTTSTTHHHHHHHHTCEECSSEEECCTTSCHHHHHHHHHHHH
T ss_pred ecCCHHHHHHhcCCccHHHHHHHccceeCCCeeecCCCCCHHHHHHHHHHHH
Confidence 367889988665432 357999776789998 67777777666553
No 23
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=31.85 E-value=67 Score=20.85 Aligned_cols=54 Identities=19% Similarity=0.361 Sum_probs=38.7
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-++-..| ..|.|+.++...-.| ..+ ..|.|| .+.+.|+.++..+
T Consensus 37 v~l~v~~---~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~-~~i~l~~~~~~~f~~~l~~~ 93 (172)
T 3htm_A 37 CCLCVAG---QEFQAHKAILAARSPVFSAMFEHEMEE---SKK-NRVEINDVEPEVFKEMMCFI 93 (172)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHSCCCG---GGT-TEEEECSSCHHHHHHHHHHH
T ss_pred eEEEECC---EEEEeeHHHHHHcCHHHHHHHccCccc---cCC-CeEEecCCCHHHHHHHHHHH
Confidence 4566764 6788887777 469999999853222 222 578888 6899999998865
No 24
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=31.41 E-value=13 Score=23.03 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=18.6
Q ss_pred cccCcHHHHHHHHhhHHhcC
Q 036909 54 SYLNQPLFQDLLSRAEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEfG 73 (100)
.||+.-.|.+++.++.+||-
T Consensus 31 ~yLsdedF~~vFgmsr~eF~ 50 (67)
T 2k6m_S 31 IYLTDEDFEFALDMTRDEYN 50 (67)
T ss_dssp GGSCHHHHHHHTSSCHHHHT
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 25
>3n5b_B ASR0485 protein; PII, PIPX, transcription regulator, signal transducer; HET: ADP; 1.90A {Nostoc}
Probab=31.41 E-value=6 Score=27.15 Aligned_cols=13 Identities=31% Similarity=0.662 Sum_probs=9.7
Q ss_pred cccCcHHHHHHHH
Q 036909 54 SYLNQPLFQDLLS 66 (100)
Q Consensus 54 ~~L~hP~F~~LL~ 66 (100)
.|||||.|.-|-.
T Consensus 28 ~YLNHPTFGLLyr 40 (112)
T 3n5b_B 28 TYINHPTWGLLYR 40 (112)
T ss_dssp CEEEETTTEEEEE
T ss_pred hhccCCccchhee
Confidence 3999999865543
No 26
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=30.82 E-value=1.8e+02 Score=22.26 Aligned_cols=55 Identities=22% Similarity=0.414 Sum_probs=39.1
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
.+.|-..|.||++. ..-....--.++.||.|+... .+.+| ++.+++...+..|+.
T Consensus 32 ~~P~LavilvG~dp-----------aS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 88 (288)
T 1b0a_A 32 RAPGLAVVLVGSNP-----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLNA 88 (288)
T ss_dssp CCCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeCCCh-----------hHHHHHHHHHHHHHHcCCEEE--EEECCCCCCHHHHHHHHHHhcC
Confidence 44688899999841 012344556778899999876 68888 577888888887764
No 27
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=30.30 E-value=54 Score=20.51 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=37.3
Q ss_pred EEEEEcCCCceEEEEeccccC--cHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYLN--QPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L~--hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..|. .|.|++++.....| + ..|.|| .+...|+.++..+
T Consensus 35 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~-~~i~l~~~~~~~~f~~~l~~i 90 (125)
T 3ohu_A 35 VTLIVER---KEFRAHRAVLAACSEYFWQALVGQTKN-----D-LVVSLPEEVTARGFGPLLQFA 90 (125)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHTTCCCS-----S-CEEECCTTCCHHHHHHHHHHH
T ss_pred eEEEECC---EEEechHHHHHHcCHHHHHHhcCCCCC-----C-cEEEeCCCCCHHHHHHHHHhH
Confidence 4556664 67777766664 58899998764333 2 568887 7999999998865
No 28
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=30.02 E-value=1.8e+02 Score=22.14 Aligned_cols=54 Identities=15% Similarity=0.272 Sum_probs=39.8
Q ss_pred CCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 33 PKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 33 pkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
+.|-..|.||++. ..-....--.++.+|.|+... .+.+| ++.+++...+..++.
T Consensus 33 ~P~Lavilvg~dp-----------aS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 88 (285)
T 3p2o_A 33 ESCLAVILVGDNP-----------ASQTYVKSKAKACEECGIKSL--VYHLNENITQNELLALINTLNH 88 (285)
T ss_dssp CCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCH-----------HHHHHHHHHHHHHHHcCCeEE--EEECCCCCCHHHHHHHHHHHhC
Confidence 5588889999841 012345567788899999875 68899 888888888887764
No 29
>1z3x_A Putative cytidyltransferase; transferase activator; 1.50A {Thermosynechococcus elongatus} SCOP: a.118.1.22 a.261.1.1 PDB: 1z3y_A
Probab=29.32 E-value=2.3 Score=32.46 Aligned_cols=29 Identities=28% Similarity=0.447 Sum_probs=18.7
Q ss_pred CCCCCCeEEEEEcCCCceEEEEeccccCcHHH
Q 036909 30 LDVPKGFLAVYVGETQRKRFLVPVSYLNQPLF 61 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F 61 (100)
..+|+||+|..-.- +=.-+=.+.|+||.|
T Consensus 208 l~AP~GHLP~~~~l---rGv~l~~~ll~hpa~ 236 (238)
T 1z3x_A 208 LSAPRGHLPLTNQL---RGVQVLNALLNHPAW 236 (238)
T ss_dssp TTSCTTCCSCCCCT---TCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcCccc---ccHHHHHHHHcCccc
Confidence 35899999986421 112234567888876
No 30
>1y6i_A Mg-chelatase cofactor GUN4; helix-bundle, porphyrin binding, ligand binding protein; 1.78A {Synechocystis SP} SCOP: a.118.1.22 a.261.1.1
Probab=28.40 E-value=3.1 Score=31.60 Aligned_cols=30 Identities=23% Similarity=0.430 Sum_probs=19.5
Q ss_pred CCCCCCeEEEEEcCCCceEEEEeccccCcHHHH
Q 036909 30 LDVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQ 62 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~ 62 (100)
..+|+||+|..-.- +=.-+=.+.|+||.|.
T Consensus 200 l~AP~GHLP~~~~l---rG~~l~~~ll~hpa~~ 229 (233)
T 1y6i_A 200 LSAPQGHLPLLNQL---RGVRVAESLYRHPVWS 229 (233)
T ss_dssp TTSCTTCCSCCCCT---TCTHHHHHHHTSTHHH
T ss_pred CCCCCCCCCCcccc---chHHHHHHHHCCcccc
Confidence 35899999986421 1111445788899884
No 31
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=26.91 E-value=1.5e+02 Score=22.83 Aligned_cols=55 Identities=18% Similarity=0.388 Sum_probs=39.9
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
.+.|...|.||++. .......--.++.||.|+... .+.+| ++.+++...+..|+.
T Consensus 34 ~~P~LavilvG~dp-----------aS~~Yv~~k~k~~~~~Gi~~~--~~~lp~~~s~~ell~~I~~lN~ 90 (301)
T 1a4i_A 34 FTPRLAILQVGNRD-----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITSLNE 90 (301)
T ss_dssp CCCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCh-----------hHHHHHHHHHHHHHHcCCEEE--EEECCCCCCHHHHHHHHHHhcC
Confidence 34688889999841 013455666778899999875 67888 667788888888764
No 32
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=26.06 E-value=92 Score=19.36 Aligned_cols=49 Identities=10% Similarity=0.093 Sum_probs=35.7
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeeeC-cHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIPC-EENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IPC-~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++.. ++ ..+.|+- +.+.|+.++..+
T Consensus 30 v~l~v~~---~~~~aHk~vLaa~S~yF~~~f~~--------~~-~~i~l~~~~~~~f~~ll~~~ 81 (119)
T 2q81_A 30 CTFVVDG---VHFKAHKAVLAACSEYFKMLFVD--------QK-DVVHLDISNAAGLGQVLEFM 81 (119)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHH--------CC-SGGGGGGCCHHHHHHHHHHH
T ss_pred eEEEECC---EEEehhHHHHHHcCHHHHHHHcC--------CC-CEEEeCCCCHHHHHHHHHHH
Confidence 3455664 6888887777 47999999974 22 4677775 788999998765
No 33
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=25.09 E-value=40 Score=27.56 Aligned_cols=44 Identities=25% Similarity=0.348 Sum_probs=30.5
Q ss_pred CCCCCCeEEEEEcC---------CCceEEEEeccccCcHHHHHHHHhhHHhcCC
Q 036909 30 LDVPKGFLAVYVGE---------TQRKRFLVPVSYLNQPLFQDLLSRAEEEFGF 74 (100)
Q Consensus 30 ~~vpkG~~aVyVG~---------~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~ 74 (100)
...|++++-+.|-| .-++|-.-=++ +-||.||+.|.+++++.|+
T Consensus 402 vtt~~~~v~~vvTE~Gva~l~G~s~~eRa~~lI~-iAHPdfR~~L~~~A~~~~~ 454 (455)
T 3qli_A 402 VTTPRIDTHYIVTEFGAVNLKGLSSTERALRIIE-LAHPDFRDELTQAAKKMHL 454 (455)
T ss_dssp CSBCTTTCCEEEETTEEEECTTCCHHHHHHHHHT-TSCHHHHHHHHHHHHHTTC
T ss_pred cccCcccccEEEeccEEEECCCCCHHHHHHHHHH-ccCcchHHHHHHHHHHcCC
Confidence 35688888877755 11334333334 8999999999998888764
No 34
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=24.34 E-value=79 Score=19.87 Aligned_cols=54 Identities=19% Similarity=0.361 Sum_probs=37.5
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ +.|-+.-..| ..|.|+.++...-.| ..+ +.|.|| .+.+.|+.++..+
T Consensus 28 v~l~v~~---~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~-~~i~l~~~~~~~~~~~l~~~ 84 (145)
T 4eoz_A 28 CCLCVAG---QEFQAHKAILAARSPVFSAMFEHEMEE---SKK-NRVEINDVEPEVFKEMMCFI 84 (145)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHSSSHH---HHH-TEEEECSSCHHHHHHHHHHH
T ss_pred eEEEECC---EEEEeehHHHHHcCHHHHHHHcCCCcC---CCC-ceEEecCCCHHHHHHHHHhh
Confidence 4566664 5777776666 468999999753222 112 578887 6899999998865
No 35
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=24.26 E-value=27 Score=19.03 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=13.8
Q ss_pred cCcHHHHHHHHhhHHhc
Q 036909 56 LNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 56 L~hP~F~~LL~~aeEEf 72 (100)
|+.-.|..++.++.+||
T Consensus 1 Lsd~dF~~vFgmsr~eF 17 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp CCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 45677889999998887
No 36
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=24.18 E-value=46 Score=17.42 Aligned_cols=13 Identities=31% Similarity=0.846 Sum_probs=10.4
Q ss_pred HHHHHHhhHHhcC
Q 036909 61 FQDLLSRAEEEFG 73 (100)
Q Consensus 61 F~~LL~~aeEEfG 73 (100)
..+|.+.-||+||
T Consensus 18 l~eLvk~lEe~fG 30 (30)
T 1zav_U 18 LAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 4678888889988
No 37
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=23.40 E-value=1.1e+02 Score=19.11 Aligned_cols=49 Identities=20% Similarity=0.362 Sum_probs=34.5
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++... . ..|.|+ .+.+.|+.++..+
T Consensus 34 v~l~v~~---~~f~aHk~vLaa~S~~F~~~f~~~--------~-~~i~l~~~~~~~f~~~l~~~ 85 (116)
T 3fkc_A 34 VTVIVED---RKFRAHKNILSASSTYFHQLFSVA--------G-QVVELSFIRAEIFAEILNYI 85 (116)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHTTSC--------C-SEEEECSSCHHHHHHHHHHH
T ss_pred EEEEECC---EEEehhHHHHHHcCHHHHHHHcCC--------C-CEEEeCCCCHHHHHHHHHhh
Confidence 3556664 5777765555 358888887653 2 578887 7899999998865
No 38
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=22.64 E-value=1.2e+02 Score=18.78 Aligned_cols=49 Identities=20% Similarity=0.317 Sum_probs=35.3
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++.. .. ..|.|+ .+.+.|+.++..+
T Consensus 31 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~--------~~-~~i~l~~~~~~~f~~ll~~~ 82 (121)
T 1buo_A 31 VVIMVDS---QEFHAHRTVLACTSKMFEILFHR--------NS-QHYTLDFLSPKTFQQILEYA 82 (121)
T ss_dssp EEEEESS---CEEEECHHHHHHHCHHHHHHTTS--------CC-SEEEECSSCHHHHHHHHHHH
T ss_pred EEEEECC---EEEehhHHHHhhcCHHHHHHHcC--------CC-cEEEeCCCCHHHHHHHHHhh
Confidence 3455664 5777777666 57889998863 12 578888 7889999998765
No 39
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=22.60 E-value=1.1e+02 Score=19.05 Aligned_cols=52 Identities=17% Similarity=0.282 Sum_probs=35.5
Q ss_pred EEEEEcCCCceEEEEecccc--CcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYL--NQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L--~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..| ..|.|++++.....| . ..+.|| .+...|+.++..+
T Consensus 32 v~l~v~~---~~~~aHk~vLaa~S~yF~~mf~~~~~e-----~-~~i~l~~~v~~~~f~~lL~~i 87 (124)
T 2ihc_A 32 VTIFVEG---QRFRAHRSVLAACSSYFHSRIVGQADG-----E-LNITLPEEVTVKGFEPLIQFA 87 (124)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHTTC--------C-EEEECCTTSCHHHHHHHHHHH
T ss_pred EEEEECC---EEEecHHHHHHHcCHHHHHHHcCCCCC-----C-ceEeecCCcCHHHHHHHHHHh
Confidence 3455664 6787777776 478999999754322 2 468885 7888999988765
No 40
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}
Probab=22.37 E-value=51 Score=24.68 Aligned_cols=40 Identities=15% Similarity=0.333 Sum_probs=25.5
Q ss_pred CeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCc
Q 036909 35 GFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFN 75 (100)
Q Consensus 35 G~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~ 75 (100)
-..-|+-|.+. +..=.=-+.+++|.|++.++++.+.+|++
T Consensus 10 ~~~f~F~GQGs-Q~~gMg~~L~~~p~fr~~~~~~~~~lg~~ 49 (318)
T 3ezo_A 10 KFAFVFPGQGS-QSVGMLNAFADVAVVRETLDEASDALGQD 49 (318)
T ss_dssp CEEEEECCTTC-CCTTTTGGGTTCHHHHHHHHHHHHHHSSC
T ss_pred CeEEEECCcch-hhhhHHHHHhhCHHHHHHHHHHHHHhCCC
Confidence 35556666531 11111122338999999999999999875
No 41
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=22.32 E-value=21 Score=23.57 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=39.3
Q ss_pred CeEEEEEcCCCceEEEEeccccC-cH--HHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhh
Q 036909 35 GFLAVYVGETQRKRFLVPVSYLN-QP--LFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLE 98 (100)
Q Consensus 35 G~~aVyVG~~~~~RfvVp~~~L~-hP--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~ 98 (100)
..+.+-||. .||....+-|. +| .+..|.. .-..++.+.|.+-|--+...|.+||..++
T Consensus 5 ~~V~LNVGG---~~f~T~~~TL~~~P~s~L~~l~~---~~~~~~~~~g~~FiDRdp~~F~~ILnylR 65 (115)
T 3kvt_A 5 NRVIINVGG---IRHETYKATLKKIPATRLSRLTE---GMLNYDPVLNEYFFDRHPGVFAQIINYYR 65 (115)
T ss_dssp CEEEEEETT---EEEEEEHHHHTTSCSSTTTTCCT---TSTTEETTTTEEEECSCTTTHHHHHHHHH
T ss_pred CEEEEEECC---EEEEecHHHHhcCCCccHHHHhc---CCCCCCCCCCcEEEecChHHHHHHHHHhc
Confidence 467788995 79999876664 23 2223322 12234444588999999999999998775
No 42
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=21.92 E-value=1.4e+02 Score=19.32 Aligned_cols=56 Identities=9% Similarity=0.083 Sum_probs=37.2
Q ss_pred EEEEEcCCCceEEEEeccccC--cHHHHHHHHhhHHhcCCccCCCceeee-CcHHHHHHHHHHh
Q 036909 37 LAVYVGETQRKRFLVPVSYLN--QPLFQDLLSRAEEEFGFNHPMGGLTIP-CEENTFIDITSRL 97 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L~--hP~F~~LL~~aeEEfG~~~~~G~L~IP-C~~~~F~~vl~~l 97 (100)
+.+.||+ ++|-+.-..|. .|.|++++...-.|-. ... ..|.|+ .+.+.|+.++..+
T Consensus 50 v~l~v~~---~~f~aHk~vLaa~S~yF~~mf~~~~~e~e-~~~-~~I~l~~v~~~~f~~lL~fi 108 (144)
T 2ppi_A 50 AHLVLDG---EEIPVQKNILAAASPYIRTKLNYNPPKDD-GST-YKIELEGISVMVMREILDYI 108 (144)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHHCC------CC-CEEECCSSCHHHHHHHHHHH
T ss_pred eEEEECC---EEEehHHHHHHHcCHHHHHHHcCCCcccc-CCC-cEEEeCCCCHHHHHHHHHHH
Confidence 3455664 68888777774 7999999975321100 122 578998 4899999999865
No 43
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=21.48 E-value=1e+02 Score=22.49 Aligned_cols=61 Identities=18% Similarity=0.289 Sum_probs=43.1
Q ss_pred CCCeEEEEEcCCCceEEEEeccccC-cH--HHHHHHHhhHHhcC--CccCCCceeeeCcHHHHHHHHHHhh
Q 036909 33 PKGFLAVYVGETQRKRFLVPVSYLN-QP--LFQDLLSRAEEEFG--FNHPMGGLTIPCEENTFIDITSRLE 98 (100)
Q Consensus 33 pkG~~aVyVG~~~~~RfvVp~~~L~-hP--~F~~LL~~aeEEfG--~~~~~G~L~IPC~~~~F~~vl~~l~ 98 (100)
+.-.+.+-||. .||.+..+-|. +| .|..|... ..++. .+. +|.+-|-.+...|++||..++
T Consensus 10 ~~~~V~LNVGG---~~F~Tt~sTL~r~PdS~L~~lfs~-~~~~~~~~De-~geyFIDRDP~~F~~ILnyLR 75 (202)
T 3drx_A 10 VSKWVRLNVGG---TYFLTTRQTLCRDPKSFLYRLCQA-DPDLDSDKDE-TGAYLIDRDPTYFGPVLNYLR 75 (202)
T ss_dssp CCCEEEEEETT---EEEEEETTGGGSCTTSSTHHHHSC-CCC----BCT-TCCEEECSCSTTHHHHHHHHH
T ss_pred CCCEEEEEECC---EEEEEeHHHHhCCCcchHHHHhcC-ccccCcccCC-CccEEecCChHHHHHHHHHhc
Confidence 45678889995 79999988875 34 46666432 11232 233 488999999999999999875
No 44
>2d5u_A N-glycanase 1; pngase, hydrolase; NMR {Mus musculus} SCOP: d.314.1.1
Probab=21.36 E-value=73 Score=21.54 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=30.7
Q ss_pred ccCcHHHHHHHHhhH------HhcCCccCCCceeee--CcHHHHHHHHHHhh
Q 036909 55 YLNQPLFQDLLSRAE------EEFGFNHPMGGLTIP--CEENTFIDITSRLE 98 (100)
Q Consensus 55 ~L~hP~F~~LL~~ae------EEfG~~~~~G~L~IP--C~~~~F~~vl~~l~ 98 (100)
-+++|.|++-+-..+ +..||...++.|++| .++...+++...|.
T Consensus 60 Rl~N~~f~~~V~~~~Ga~e~L~a~GF~~~~~~lvlp~~~~~~~l~~~~d~L~ 111 (124)
T 2d5u_A 60 RIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIA 111 (124)
T ss_dssp ECCCHHHHHTTSSSTTHHHHHHHHTCBCCSSEEECCTTSCHHHHHHHHHHHH
T ss_pred ecCCHHHHHHhcCCccHHHHHHHcccccCCCeeecCCCCCHHHHHHHHHHHH
Confidence 467899988554332 367999776789999 56667777666553
No 45
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=21.02 E-value=2.8e+02 Score=21.06 Aligned_cols=54 Identities=9% Similarity=0.224 Sum_probs=39.1
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
.+.|-..|.||++. . .-....--.++.||.|+ .. .+.+| ++.+++...+..++.
T Consensus 26 ~~P~Lavilvg~dp-------a----S~~Yv~~k~k~~~~~Gi-~~--~~~lp~~~s~~ell~~I~~lN~ 81 (276)
T 3ngx_A 26 LEPSLKLIQIGDNE-------A----ASIYARAKIRRGKKIGI-AV--DLEKYDDISMKDLLKRIDDLAK 81 (276)
T ss_dssp CCCEEEEEEESCCH-------H----HHHHHHHHHHHHHHHTC-EE--EEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCH-------H----HHHHHHHHHHHHHHCCe-EE--EEECCCCCCHHHHHHHHHHHcC
Confidence 45688899999841 0 11255667788899999 64 68888 778888888877764
No 46
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=20.14 E-value=34 Score=24.03 Aligned_cols=29 Identities=34% Similarity=0.429 Sum_probs=24.9
Q ss_pred CceEEEEeccccCcH---HHHHHHHhhHHhcC
Q 036909 45 QRKRFLVPVSYLNQP---LFQDLLSRAEEEFG 73 (100)
Q Consensus 45 ~~~RfvVp~~~L~hP---~F~~LL~~aeEEfG 73 (100)
+++=|-||+.-|+|= .-++|+++|.|.|+
T Consensus 47 ekrGi~V~LrrLK~fDC~ek~~L~~rAre~Y~ 78 (134)
T 3pmi_A 47 KMKGFTVSLKSLKHFDCKEKQTLLNQAREDFN 78 (134)
T ss_dssp TSCCEEEEGGGCEETTSTTHHHHHHHHTTTCH
T ss_pred ccCceEeEcccCCCCChHhHHHHHHHHHHHhc
Confidence 357899999998885 48999999999987
Done!