Query 036909
Match_columns 100
No_of_seqs 118 out of 648
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 10:47:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036909.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036909hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nn7a_ d.42.1.2 (A:) Potassiu 67.1 0.77 5.6E-05 28.6 0.8 58 37-99 2-60 (105)
2 d1b0aa2 c.58.1.2 (A:2-122) Tet 62.8 14 0.001 22.9 7.6 55 32-99 31-87 (121)
3 d1z3xa2 a.261.1.1 (A:88-235) G 62.4 0.16 1.2E-05 34.5 -3.5 29 31-62 119-147 (148)
4 d1unda_ a.14.1.1 (A:) Advillin 60.4 1.5 0.00011 23.1 1.0 18 55-72 1-18 (36)
5 d1y6ia2 a.261.1.1 (A:83-233) M 54.9 0.29 2.1E-05 33.4 -3.3 30 31-63 119-148 (151)
6 d1a4ia2 c.58.1.2 (A:2-126) Tet 53.7 19 0.0014 22.4 5.9 55 32-99 33-89 (125)
7 d3kvta_ d.42.1.2 (A:) akv3.1 v 53.2 1.7 0.00012 26.7 0.5 58 36-99 3-63 (103)
8 d1pzqa_ a.34.3.1 (A:) Erythron 42.9 9.4 0.00068 21.8 2.7 15 9-23 35-49 (60)
9 d1t1da_ d.42.1.2 (A:) Shaker p 42.5 3.5 0.00026 25.2 0.8 57 37-99 3-62 (100)
10 d1tjya_ c.93.1.1 (A:) AI-2 rec 42.3 14 0.00099 23.9 3.9 29 47-75 4-35 (316)
11 d1yu5x1 a.14.1.1 (X:10-76) Vil 39.0 5 0.00037 23.6 1.0 19 54-72 31-49 (67)
12 d8abpa_ c.93.1.1 (A:) L-arabin 32.9 51 0.0037 21.2 5.7 27 48-74 3-32 (305)
13 d1qzpa_ a.14.1.1 (A:) Dematin 32.0 5.4 0.00039 23.5 0.4 19 54-72 32-50 (68)
14 d1ujsa_ a.14.1.1 (A:) Actin-bi 31.9 7.5 0.00055 24.0 1.1 20 54-73 46-65 (88)
15 d2c60a1 d.15.2.2 (A:43-122) Mi 31.2 46 0.0033 19.9 4.7 51 47-100 12-68 (80)
16 d1qusa_ d.2.1.6 (A:) 36 kDa so 30.7 14 0.0011 27.0 2.7 25 53-77 13-37 (322)
17 d1yu8x1 a.14.1.1 (X:42-76) Vil 28.5 9.5 0.00069 19.6 0.9 17 56-72 1-17 (35)
18 d1dkgd1 c.55.1.1 (D:3-185) Hea 26.3 17 0.0012 23.1 2.2 41 52-92 109-149 (183)
19 d1fc4a_ c.67.1.4 (A:) 2-amino- 25.3 1.1E+02 0.0077 21.6 7.4 64 10-76 11-79 (401)
20 d1mlaa1 c.19.1.1 (A:3-127,A:19 24.0 13 0.00094 25.0 1.2 20 56-75 22-41 (235)
21 d2nptb1 d.15.2.2 (B:42-123) Mi 22.5 62 0.0045 19.4 4.1 51 47-100 12-68 (82)
22 d2c35b2 d.230.1.1 (B:1-77) N-t 20.1 69 0.005 17.7 3.9 26 47-72 9-34 (77)
23 d1y74b1 a.194.1.1 (B:83-132) P 20.0 20 0.0015 19.8 1.3 20 54-73 26-49 (50)
No 1
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=67.08 E-value=0.77 Score=28.60 Aligned_cols=58 Identities=19% Similarity=0.219 Sum_probs=39.9
Q ss_pred EEEEEcCCCceEEEEecccc-CcHHHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909 37 LAVYVGETQRKRFLVPVSYL-NQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L-~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~ 99 (100)
+.+-||. ++|.+..+-| ++|.. +|.......-++.++|.+-|--|...|++|+..++.
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~ 60 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRT 60 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhc
Confidence 4567886 7999998877 45531 122222333344445899999999999999998763
No 2
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=62.84 E-value=14 Score=22.88 Aligned_cols=55 Identities=22% Similarity=0.414 Sum_probs=40.6
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
.+.+...|+||+.. ..-.....-.++.++.|+... .+.+| |+...+...+..|+.
T Consensus 31 ~~P~LavI~vg~d~-----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~lN~ 87 (121)
T d1b0aa2 31 RAPGLAVVLVGSNP-----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLNA 87 (121)
T ss_dssp CCCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeCCCh-----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHHHhC
Confidence 34578889999841 012366777888999999875 57786 788889999888764
No 3
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=62.41 E-value=0.16 Score=34.52 Aligned_cols=29 Identities=24% Similarity=0.439 Sum_probs=19.0
Q ss_pred CCCCCeEEEEEcCCCceEEEEeccccCcHHHH
Q 036909 31 DVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQ 62 (100)
Q Consensus 31 ~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~ 62 (100)
.+|+||+|+.- . .+-..|=-..|+||.|.
T Consensus 119 ~AP~GHLP~~~-~--lrg~~~~~~~l~h~a~~ 147 (148)
T d1z3xa2 119 SAPRGHLPLTN-Q--LRGVQVLNALLNHPAWT 147 (148)
T ss_dssp TSCTTCCSCCC-C--TTCSHHHHHHHTCGGGG
T ss_pred CCCCCCCCcCC-c--cchHHHHHHHhcCcccc
Confidence 58999999753 2 23334445678888763
No 4
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.42 E-value=1.5 Score=23.11 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=16.8
Q ss_pred ccCcHHHHHHHHhhHHhc
Q 036909 55 YLNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 55 ~L~hP~F~~LL~~aeEEf 72 (100)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999997
No 5
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=54.92 E-value=0.29 Score=33.35 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=18.9
Q ss_pred CCCCCeEEEEEcCCCceEEEEeccccCcHHHHH
Q 036909 31 DVPKGFLAVYVGETQRKRFLVPVSYLNQPLFQD 63 (100)
Q Consensus 31 ~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~ 63 (100)
.+|+||+|+.-.-.. -| +--+.|+||.|.+
T Consensus 119 ~AP~GHLP~~~~lrG-~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 119 SAPQGHLPLLNQLRG-VR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TSCTTCCSCCCCTTC-TH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCccchhhh-HH--HHHHHHcCcchhh
Confidence 589999998642110 11 3335789998864
No 6
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.68 E-value=19 Score=22.37 Aligned_cols=55 Identities=18% Similarity=0.388 Sum_probs=38.9
Q ss_pred CCCCeEEEEEcCCCceEEEEeccccCcHHHHHHHHhhHHhcCCccCCCceeee--CcHHHHHHHHHHhhc
Q 036909 32 VPKGFLAVYVGETQRKRFLVPVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIP--CEENTFIDITSRLER 99 (100)
Q Consensus 32 vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~~ 99 (100)
++.....|+||++. ..-.....-.++.++.|.... .+.+| ++...+...+..++.
T Consensus 33 ~~P~LavIlvg~d~-----------aS~~Yv~~k~k~a~~~Gi~~~--~~~l~~~~~e~el~~~I~~lN~ 89 (125)
T d1a4ia2 33 FTPRLAILQVGNRD-----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITSLNE 89 (125)
T ss_dssp CCCEEEEEEESCCH-----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCh-----------hHHHHHHHHHHHHHhccceEE--EEecCcchhHHHHHHHHHHHhc
Confidence 34467788899841 012356677888999999864 57888 567788888887764
No 7
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=53.24 E-value=1.7 Score=26.74 Aligned_cols=58 Identities=16% Similarity=0.214 Sum_probs=40.9
Q ss_pred eEEEEEcCCCceEEEEeccccCc-H--HHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909 36 FLAVYVGETQRKRFLVPVSYLNQ-P--LFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99 (100)
Q Consensus 36 ~~aVyVG~~~~~RfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~ 99 (100)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.++|.+-|--+...|++||..++.
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~ 63 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINYYRS 63 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHHHcc
Confidence 45677886 799999887763 4 23222 23333445556899999999999999998753
No 8
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=42.91 E-value=9.4 Score=21.82 Aligned_cols=15 Identities=13% Similarity=0.051 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhhhhh
Q 036909 9 ILAKQILRQSALTAK 23 (100)
Q Consensus 9 ~~~k~~l~r~~~~~~ 23 (100)
.+|..+||||+|+-.
T Consensus 35 ~rle~llrrw~srr~ 49 (60)
T d1pzqa_ 35 QRLESLLRRWNSRRA 49 (60)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCC
Confidence 478899999999854
No 9
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=42.54 E-value=3.5 Score=25.20 Aligned_cols=57 Identities=19% Similarity=0.205 Sum_probs=38.9
Q ss_pred EEEEEcCCCceEEEEeccccCc-H--HHHHHHHhhHHhcCCccCCCceeeeCcHHHHHHHHHHhhc
Q 036909 37 LAVYVGETQRKRFLVPVSYLNQ-P--LFQDLLSRAEEEFGFNHPMGGLTIPCEENTFIDITSRLER 99 (100)
Q Consensus 37 ~aVyVG~~~~~RfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l~~ 99 (100)
+.+-||. ++|.+..+-|.. | .+..|... .-.++.++|.+-|--|...|++||..++.
T Consensus 3 I~LNVGG---~~f~t~~~tL~~~p~s~l~~l~~~---~~~~~~~~g~~FiDRdp~~F~~IL~flR~ 62 (100)
T d1t1da_ 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQKR---NRYYDPLRNEYFFDRNRPSFDAILYFYQS 62 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHHH---GGGEETTTTEEEECSCSTTHHHHHHHHHT
T ss_pred EEEEECC---EEEEEeHHHHhhCCCchhHHHHhC---CCcCCCCCCeEEEecCHHHHHHHHHHHhc
Confidence 4567885 799998877643 4 33333321 11234455899999999999999998753
No 10
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=42.33 E-value=14 Score=23.94 Aligned_cols=29 Identities=14% Similarity=0.184 Sum_probs=23.0
Q ss_pred eEEEEeccccCcHHHHHHHHh---hHHhcCCc
Q 036909 47 KRFLVPVSYLNQPLFQDLLSR---AEEEFGFN 75 (100)
Q Consensus 47 ~RfvVp~~~L~hP~F~~LL~~---aeEEfG~~ 75 (100)
+|..+=+..+++|.|..+.+- +++++||+
T Consensus 4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 788888899999999988654 45678873
No 11
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=38.96 E-value=5 Score=23.56 Aligned_cols=19 Identities=16% Similarity=0.333 Sum_probs=18.0
Q ss_pred cccCcHHHHHHHHhhHHhc
Q 036909 54 SYLNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEf 72 (100)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 12
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=32.93 E-value=51 Score=21.24 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=19.6
Q ss_pred EEEEeccccCcHHHHHHHHhh---HHhcCC
Q 036909 48 RFLVPVSYLNQPLFQDLLSRA---EEEFGF 74 (100)
Q Consensus 48 RfvVp~~~L~hP~F~~LL~~a---eEEfG~ 74 (100)
|.-+-+..+++|.|..+++-+ .++.||
T Consensus 3 kIg~v~~~~~~p~~~~~~~g~~~aa~~~G~ 32 (305)
T d8abpa_ 3 KLGFLVKQPEEPWFQTEWKFADKAGKDLGF 32 (305)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHHTE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 344556788899999988755 457787
No 13
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.04 E-value=5.4 Score=23.51 Aligned_cols=19 Identities=26% Similarity=0.399 Sum_probs=18.0
Q ss_pred cccCcHHHHHHHHhhHHhc
Q 036909 54 SYLNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEf 72 (100)
.||+.-.|.+++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 14
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.91 E-value=7.5 Score=23.97 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=18.5
Q ss_pred cccCcHHHHHHHHhhHHhcC
Q 036909 54 SYLNQPLFQDLLSRAEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 59999999999999999984
No 15
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.15 E-value=46 Score=19.92 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=37.8
Q ss_pred eEEEEeccccCcHH-HHHHHHhhHHhcCCccC----CCceeee-CcHHHHHHHHHHhhcC
Q 036909 47 KRFLVPVSYLNQPL-FQDLLSRAEEEFGFNHP----MGGLTIP-CEENTFIDITSRLERS 100 (100)
Q Consensus 47 ~RfvVp~~~L~hP~-F~~LL~~aeEEfG~~~~----~G~L~IP-C~~~~F~~vl~~l~~~ 100 (100)
+|..||. .-|+ |.+|..++..-||..=+ +.-|.|| =.-++.++.+..+++|
T Consensus 12 EkRIi~f---~RPv~~~dl~~kv~~afGq~ldl~y~n~El~IPl~~Q~DLDkAvellDrs 68 (80)
T d2c60a1 12 ERRIIAF---SRPVKYEDVEHKVTTVFGQPLDLHYMNNELSILLKNQDDLDKAIDILDRS 68 (80)
T ss_dssp EEEEEEE---CSSCCHHHHHHHHHHHHSSCCEEEEECSSCEEECCSHHHHHHHHHHHHHC
T ss_pred ceEEEec---CCCccHHHHHHHHHHHhCCeeeeEEecCeEEEecccHHHHHHHHHHHccC
Confidence 5666664 2454 99999999999996533 4678899 3567788888888775
No 16
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=30.75 E-value=14 Score=27.01 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=22.3
Q ss_pred ccccCcHHHHHHHHhhHHhcCCccC
Q 036909 53 VSYLNQPLFQDLLSRAEEEFGFNHP 77 (100)
Q Consensus 53 ~~~L~hP~F~~LL~~aeEEfG~~~~ 77 (100)
-+|.+||-+++++++..+++||+.+
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~~ 37 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDRQ 37 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCHH
Confidence 3689999999999999999999864
No 17
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=28.48 E-value=9.5 Score=19.63 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=14.2
Q ss_pred cCcHHHHHHHHhhHHhc
Q 036909 56 LNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 56 L~hP~F~~LL~~aeEEf 72 (100)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999999887
No 18
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=26.31 E-value=17 Score=23.07 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=30.2
Q ss_pred eccccCcHHHHHHHHhhHHhcCCccCCCceeeeCcHHHHHH
Q 036909 52 PVSYLNQPLFQDLLSRAEEEFGFNHPMGGLTIPCEENTFID 92 (100)
Q Consensus 52 p~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~ 92 (100)
..+-|-.-+++.|.+.|++.+|-.-..-.|++|+.....++
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~r 149 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQR 149 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHH
Confidence 44456666788888889988887655467999998766554
No 19
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=25.34 E-value=1.1e+02 Score=21.61 Aligned_cols=64 Identities=11% Similarity=0.125 Sum_probs=36.8
Q ss_pred HHHHHHHHhhhhhhcCCCCcCCCCCCeEEEEEcCCCceEEE--EeccccC---cHHHHHHHHhhHHhcCCcc
Q 036909 10 LAKQILRQSALTAKKGASTSLDVPKGFLAVYVGETQRKRFL--VPVSYLN---QPLFQDLLSRAEEEFGFNH 76 (100)
Q Consensus 10 ~~k~~l~r~~~~~~~~~s~~~~vpkG~~aVyVG~~~~~Rfv--Vp~~~L~---hP~F~~LL~~aeEEfG~~~ 76 (100)
++.+-|.+++..+.-.....-.-+.|-- |.+.++ ++|+ ...+||+ ||.+++...++.+.||...
T Consensus 11 ~~~~~l~~~~~~g~~r~~~~i~~~~g~~-v~~~dG--~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~ 79 (401)
T d1fc4a_ 11 QLTNDLETARAEGLFKEERIITSAQQAD-ITVADG--SHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGM 79 (401)
T ss_dssp HHHHHHHHHHHTTCCCCCCCBCSCSSSE-EEBTTS--CEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHcCCCCcceeccCCCCCe-EEecCC--CEEEEEEccccccccCCHHHHHHHHHHHHHhCCCc
Confidence 4555566666543211111111233332 344443 6675 3456763 9999999999999999764
No 20
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=24.02 E-value=13 Score=25.04 Aligned_cols=20 Identities=15% Similarity=0.561 Sum_probs=17.5
Q ss_pred cCcHHHHHHHHhhHHhcCCc
Q 036909 56 LNQPLFQDLLSRAEEEFGFN 75 (100)
Q Consensus 56 L~hP~F~~LL~~aeEEfG~~ 75 (100)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46799999999999999875
No 21
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.52 E-value=62 Score=19.36 Aligned_cols=51 Identities=25% Similarity=0.447 Sum_probs=37.7
Q ss_pred eEEEEeccccCcHH-HHHHHHhhHHhcCCccC----CCceeee-CcHHHHHHHHHHhhcC
Q 036909 47 KRFLVPVSYLNQPL-FQDLLSRAEEEFGFNHP----MGGLTIP-CEENTFIDITSRLERS 100 (100)
Q Consensus 47 ~RfvVp~~~L~hP~-F~~LL~~aeEEfG~~~~----~G~L~IP-C~~~~F~~vl~~l~~~ 100 (100)
+|..||.. -|+ |.+|..++..-||..=+ +.-|.|| =.-+..++.+..+++|
T Consensus 12 EkRIi~f~---RPv~~~dl~~kv~~afGq~ldl~y~n~EL~IPl~~Q~DLDkAvellDrs 68 (82)
T d2nptb1 12 EKRILQFP---RPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRS 68 (82)
T ss_dssp EEEEEEEC---SSCCHHHHHHHHHHHHTSCEEEEEEETTEEEECCCHHHHHHHHHHHHHC
T ss_pred ceEEEecC---CCccHHHHHHHHHHHhCCeeeEEEecCeEEEecccHHHHHHHHHHHccC
Confidence 56666642 454 99999999999996432 3568899 3567788888888775
No 22
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.12 E-value=69 Score=17.69 Aligned_cols=26 Identities=15% Similarity=0.278 Sum_probs=23.0
Q ss_pred eEEEEeccccCcHHHHHHHHhhHHhc
Q 036909 47 KRFLVPVSYLNQPLFQDLLSRAEEEF 72 (100)
Q Consensus 47 ~RfvVp~~~L~hP~F~~LL~~aeEEf 72 (100)
....||-++|+.++-+.|.++..+.|
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~ 34 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEV 34 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHH
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHh
Confidence 56789999999999999999988877
No 23
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.03 E-value=20 Score=19.79 Aligned_cols=20 Identities=40% Similarity=0.595 Sum_probs=14.4
Q ss_pred cccCcHHHHHHHHh----hHHhcC
Q 036909 54 SYLNQPLFQDLLSR----AEEEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~----aeEEfG 73 (100)
..|+.|-|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 35778999999974 455565
Done!