BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036910
         (314 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|151547430|gb|ABS12459.1| cysteine protease Cp [Citrus sinensis]
          Length = 361

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 311/361 (86%), Positives = 314/361 (86%), Gaps = 47/361 (13%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL
Sbjct: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN            
Sbjct: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQR 120

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVKDQGHCGSCWTFSTTGSLEAA
Sbjct: 121 HRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAA 180

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV
Sbjct: 181 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 240

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG
Sbjct: 241 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 300

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK++MGKNMCGIATCASYPVV
Sbjct: 301 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKIKMGKNMCGIATCASYPVV 360

Query: 314 A 314
           A
Sbjct: 361 A 361


>gi|146215994|gb|ABQ10199.1| cysteine protease Cp1 [Actinidia deliciosa]
          Length = 358

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 251/361 (69%), Positives = 276/361 (76%), Gaps = 50/361 (13%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MAR     S +I+L+ C A AS SAS+FDD NPIR V SD LR+FETS+L V+G +RHAL
Sbjct: 1   MARTS--FSLLIILIACVAGAS-SASTFDDENPIRTVVSDALREFETSILSVLGDSRHAL 57

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SFARFA RYGK YE+ EE KLRFA FS+NL LIRS N KGLSY LG+N            
Sbjct: 58  SFARFAHRYGKRYETAEETKLRFAIFSENLKLIRSHNKKGLSYTLGVNHFADWTWEEFRR 117

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVKDQGHCGSCWTFSTTG+LEAA
Sbjct: 118 HRLGAAQNCSATTKGNHKLTEEALPEMKDWRVSGIVSPVKDQGHCGSCWTFSTTGALEAA 177

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           Y QAFGKGISLSEQQLVDCA AFNN GC+GGLPSQAFEY+KYNGGLDTEEAYPYTGK+G 
Sbjct: 178 YKQAFGKGISLSEQQLVDCAGAFNNFGCSGGLPSQAFEYVKYNGGLDTEEAYPYTGKNGE 237

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFSSENVGVQVLDSVNITLGAEDEL+HAV  VRPVSVAF+VV+GFR YK GVY+S  CG
Sbjct: 238 CKFSSENVGVQVLDSVNITLGAEDELKHAVAFVRPVSVAFQVVNGFRLYKEGVYTSDTCG 297

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            TPMDVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYPV+
Sbjct: 298 RTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDSGYFKMEMGKNMCGVATCASYPVI 357

Query: 314 A 314
           A
Sbjct: 358 A 358


>gi|312282841|dbj|BAJ34286.1| unnamed protein product [Thellungiella halophila]
          Length = 358

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/355 (69%), Positives = 277/355 (78%), Gaps = 49/355 (13%)

Query: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA 66
           ++ SV+L++  AA+A+A    FD+SNPIR+VS DGLR+ E SV+Q++GQ+RH LSFARF 
Sbjct: 6   ILPSVVLVILIAASAAADIG-FDESNPIRMVS-DGLREIEESVVQILGQSRHVLSFARFT 63

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------ 108
            RYGK Y++ EE+KLRF+ F +NLDLIRSTN K LSY+LG+N                  
Sbjct: 64  HRYGKKYQNAEEIKLRFSIFKENLDLIRSTNKKRLSYKLGVNQFADLTWQEFQRNKLGAA 123

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        +SPVKDQG CGSCWTFSTTG+LEAAYHQAFG
Sbjct: 124 QNCSATLKGSHKLTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFG 183

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           KGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTGKDG CK+S+E
Sbjct: 184 KGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKDGTCKYSAE 243

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
           NVGVQVLDSVNITLGAEDEL+HAVGLVRPVS+AFEVV  FR YKSGVY+ + CGNTPMDV
Sbjct: 244 NVGVQVLDSVNITLGAEDELKHAVGLVRPVSIAFEVVKSFRLYKSGVYTDSHCGNTPMDV 303

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NHAV+AVGYG+EDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 304 NHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 358


>gi|23397070|gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
          Length = 358

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/355 (69%), Positives = 279/355 (78%), Gaps = 49/355 (13%)

Query: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA 66
           ++SSV+L++  AA+A+A+   FD+SNPIR+VS DGLR+ E SV Q++GQ+RH LSFARF 
Sbjct: 6   ILSSVVLVVLFAASAAANIG-FDESNPIRMVS-DGLREVEESVSQILGQSRHVLSFARFT 63

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------ 108
            RYGK Y++VEEMKLRF+ F +NLDLIRSTN KGLSY+LG+N                  
Sbjct: 64  HRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAA 123

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        +SPVKDQG CGSCWTFSTTG+LEAAYHQAFG
Sbjct: 124 QNCSATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFG 183

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           KGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTE+AYPYTGKD  CKFS+E
Sbjct: 184 KGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAE 243

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
           NVGVQVL+SVNITLGAEDEL+HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDV
Sbjct: 244 NVGVQVLNSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDV 303

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 304 NHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 358


>gi|18141289|gb|AAL60582.1|AF454960_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 359

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/361 (68%), Positives = 279/361 (77%), Gaps = 50/361 (13%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           M+    L S+V+L+L   AA++A +  FD+SNPIR+VS D LR+ E SV+Q++GQ+RH +
Sbjct: 2   MSVRTILPSAVLLILI--AASTAESIGFDESNPIRMVS-DRLREVEESVVQILGQSRHVI 58

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SFARFA RYGK YE+ EEMKLRF+ F +NLDLIRSTN KGLSY+LG+N            
Sbjct: 59  SFARFAHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADMTWQEFQR 118

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVKDQG CGSCWTFSTTG+LEAA
Sbjct: 119 TKLGAAQNCSATLKGTHKLTGEALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAA 178

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           YHQAFGKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTG+DG 
Sbjct: 179 YHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGEDGT 238

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CK+S+ENVGV+VLDSVNITLGAEDEL+HAVGLVRPVS+AFEV+  FR YKSGVYS + CG
Sbjct: 239 CKYSAENVGVEVLDSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFRLYKSGVYSDSHCG 298

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            TPMDVNHAV+AVGYG+EDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVV
Sbjct: 299 QTPMDVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 358

Query: 314 A 314
           A
Sbjct: 359 A 359


>gi|224069140|ref|XP_002326284.1| predicted protein [Populus trichocarpa]
 gi|118482340|gb|ABK93094.1| unknown [Populus trichocarpa]
 gi|222833477|gb|EEE71954.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 250/362 (69%), Positives = 281/362 (77%), Gaps = 53/362 (14%)

Query: 1   MARPVQLV-SSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHA 59
           MAR   LV SS++ LLCC AA S    SFD+SNPI+LVS D L DFE+S ++V+GQ+R A
Sbjct: 1   MARVAGLVVSSILFLLCCVAAGS----SFDESNPIKLVS-DRLHDFESSFVKVLGQSRRA 55

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           LSFARFA R+GK YE+  EMKLRFA FS++LDLIRSTN KGL Y LGLN           
Sbjct: 56  LSFARFAHRHGKRYETEGEMKLRFAIFSESLDLIRSTNKKGLPYTLGLNQFADWTWQEFQ 115

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               +SPVK+QGHCGSCWTFSTTG+LEA
Sbjct: 116 KYRLGAAQNCSATTRGNHKLTNALLPETKDWREEGIVSPVKNQGHCGSCWTFSTTGALEA 175

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
           AYHQAFGKGISLSEQQLVDCA+AFNN GCNGGLPSQAFEYIK+NGGLDTEEAYPYTGKD 
Sbjct: 176 AYHQAFGKGISLSEQQLVDCARAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKDD 235

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKC 252
            CKFSSENVGV+V++SVNITLGAEDEL+HAV  VRPVSVAFEVV  FR YK GVY+++ C
Sbjct: 236 ACKFSSENVGVRVVESVNITLGAEDELKHAVAFVRPVSVAFEVVGSFRLYKEGVYTTSTC 295

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G+TPMDVNHAV+AVGYGVE+G+PYWLIKNSWGE+WGD+GYFKMEMGKNMCGIATCASYPV
Sbjct: 296 GSTPMDVNHAVLAVGYGVENGIPYWLIKNSWGEDWGDNGYFKMEMGKNMCGIATCASYPV 355

Query: 313 VA 314
           VA
Sbjct: 356 VA 357


>gi|255550445|ref|XP_002516273.1| cysteine protease, putative [Ricinus communis]
 gi|223544759|gb|EEF46275.1| cysteine protease, putative [Ricinus communis]
          Length = 358

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 243/340 (71%), Positives = 269/340 (79%), Gaps = 48/340 (14%)

Query: 22  SASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKL 81
           + S S+FD+SNPIRLVS D LRDFE SV +V+G +R ALSF+RF  R+GK Y+S +EMK+
Sbjct: 20  AVSGSNFDESNPIRLVS-DRLRDFEASVTKVVGHSRRALSFSRFVYRHGKRYQSEDEMKM 78

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLN--------------------------------- 108
           RFA FS+NLD IRSTN KGLSY L +N                                 
Sbjct: 79  RFAIFSENLDFIRSTNRKGLSYTLAVNDFADLTWQEFQKHRLGAAQNCSATTKGNHKLTG 138

Query: 109 --------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 154
                         +SPVK+QGHCGSCWTFSTTG+LEAAYHQAFGKGISLSEQQLVDCA 
Sbjct: 139 VALPDTKDWREVGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAG 198

Query: 155 AFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLG 214
           AFNN GC+GGLPSQAFEYIKYNGGL+TEEAYPYTG+DG CKFSSENVG+QVLDSVNITLG
Sbjct: 199 AFNNFGCHGGLPSQAFEYIKYNGGLETEEAYPYTGEDGACKFSSENVGIQVLDSVNITLG 258

Query: 215 AEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV 274
           AEDEL+ AVGLVRPVSVAFEVV GFRFYKSGVY+S  CG+TPMDVNHAV+AVGYGVEDGV
Sbjct: 259 AEDELKEAVGLVRPVSVAFEVVSGFRFYKSGVYTSDTCGSTPMDVNHAVLAVGYGVEDGV 318

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           PYWL+KNSWGENWGDHGYFKMEMGKNMCG+ATCASYPVVA
Sbjct: 319 PYWLVKNSWGENWGDHGYFKMEMGKNMCGVATCASYPVVA 358


>gi|18407961|ref|NP_566880.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|73622182|sp|Q8RWQ9.1|ALEUL_ARATH RecName: Full=Thiol protease aleurain-like; Flags: Precursor
 gi|20147207|gb|AAM10319.1| AT3g45310/F18N11_70 [Arabidopsis thaliana]
 gi|332644500|gb|AEE78021.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 358

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/361 (67%), Positives = 277/361 (76%), Gaps = 50/361 (13%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           M+  + L SS++L+L   AAA++    FD+SNPI++VS D L + E +V+Q++GQ+RH L
Sbjct: 1   MSVKLNLSSSILLILF--AAAASKEIGFDESNPIKMVS-DNLHELEDTVVQILGQSRHVL 57

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SF+RF  RYGK Y+SVEEMKLRF+ F +NLDLIRSTN KGLSY+L LN            
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQR 117

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVK+QGHCGSCWTFSTTG+LEAA
Sbjct: 118 YKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAA 177

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           YHQAFGKGISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 
Sbjct: 178 YHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG 237

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFS++N+GVQV DSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  CG
Sbjct: 238 CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCG 297

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NTPMDVNHAV+AVGYGVED VPYWLIKNSWG  WGD+GYFKMEMGKNMCG+ATC+SYPVV
Sbjct: 298 NTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVV 357

Query: 314 A 314
           A
Sbjct: 358 A 358


>gi|18424347|ref|NP_568921.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|71152227|sp|Q8H166.2|ALEU_ARATH RecName: Full=Thiol protease aleurain; Short=AtALEU; AltName:
           Full=Senescence-associated gene product 2; Flags:
           Precursor
 gi|7230640|gb|AAF43041.1|AF233883_1 AALP protein [Arabidopsis thaliana]
 gi|13430722|gb|AAK25983.1|AF360273_1 putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|9757740|dbj|BAB08221.1| AALP protein [Arabidopsis thaliana]
 gi|21617934|gb|AAM66984.1| cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397068|gb|AAN31819.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397074|gb|AAN31822.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|24417304|gb|AAN60262.1| unknown [Arabidopsis thaliana]
 gi|222423506|dbj|BAH19723.1| AT5G60360 [Arabidopsis thaliana]
 gi|222424411|dbj|BAH20161.1| AT5G60360 [Arabidopsis thaliana]
 gi|332009930|gb|AED97313.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 358

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/334 (71%), Positives = 263/334 (78%), Gaps = 48/334 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FD+SNPIR+VS DGLR+ E SV Q++GQ+RH LSFARF  RYGK Y++VEEMKLRF+ F 
Sbjct: 26  FDESNPIRMVS-DGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFK 84

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           +NLDLIRSTN KGLSY+LG+N                                       
Sbjct: 85  ENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPET 144

Query: 109 --------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
                   +SPVKDQG CGSCWTFSTTG+LEAAYHQAFGKGISLSEQQLVDCA AFNN G
Sbjct: 145 KDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGLPSQAFEYIK NGGLDTE+AYPYTGKD  CKFS+ENVGVQVL+SVNITLGAEDEL+
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELK 264

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWLIK
Sbjct: 265 HAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIK 324

Query: 281 NSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 325 NSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 358


>gi|225444726|ref|XP_002278624.1| PREDICTED: thiol protease aleurain-like isoform 1 [Vitis vinifera]
 gi|147826441|emb|CAN62278.1| hypothetical protein VITISV_031382 [Vitis vinifera]
 gi|297738562|emb|CBI27807.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/364 (67%), Positives = 276/364 (75%), Gaps = 52/364 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASAS---ASSFDDSNPIRLVSSDGLRDFETSVLQVIGQAR 57
           MAR + +V++V++LLC  A+  A     SSFD+ NPIRLVS D +RD E+SVL++IG  R
Sbjct: 1   MAR-LSVVAAVLILLCAVASGEADHHFRSSFDEENPIRLVS-DSIRDLESSVLRLIGDTR 58

Query: 58  HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------- 108
           HA SFA FA RYGK Y++V+E+KLRF  FS+NL LIRSTN KGL Y L +N         
Sbjct: 59  HAHSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFADWTWEE 118

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 +SP+KDQGHCGSCWTFSTTG+L
Sbjct: 119 FRRHRLGAAQNCSATLKGNHKLTDVILPETKDWREDGIVSPIKDQGHCGSCWTFSTTGAL 178

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           EAAY QAFGKGISLSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG 
Sbjct: 179 EAAYAQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGL 238

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSST 250
           DG CKFSSEN+GVQVLDSVNITLGAEDEL+HAV  VRPVSVAFEVV  FRFYK GVY+S 
Sbjct: 239 DGTCKFSSENIGVQVLDSVNITLGAEDELKHAVAFVRPVSVAFEVVHDFRFYKKGVYTSG 298

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            CG+TPMDVNHAV+AVGYGVEDGV YWLIKNSWGENWGD+GYFKME+GKNMCG+ATC+SY
Sbjct: 299 TCGSTPMDVNHAVLAVGYGVEDGVAYWLIKNSWGENWGDNGYFKMELGKNMCGVATCSSY 358

Query: 311 PVVA 314
           PVVA
Sbjct: 359 PVVA 362


>gi|77379397|gb|ABA71355.1| cysteine protease [Brassica napus]
          Length = 359

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/357 (66%), Positives = 269/357 (75%), Gaps = 48/357 (13%)

Query: 5   VQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFAR 64
           V+ +   + LL   A ++A +  F +SNPIR+V  D L + E SV+Q++GQ RH LSFAR
Sbjct: 4   VRTILPSVALLILIAVSTAESIGFYESNPIRMVF-DRLLEVEESVVQILGQTRHVLSFAR 62

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---------------- 108
           F  RYGK YE+ EEMKLRF+ F +NLDLIRSTN KGLSY+LG+N                
Sbjct: 63  FTHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFTDMTWQEFQRTKLG 122

Query: 109 -------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQA 137
                                          +SPVKDQG CGSCWTFSTTG+LEAAYHQA
Sbjct: 123 AAQNCSATLKGTHKLTGEALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQA 182

Query: 138 FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 197
           FGKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTG+DG CK+S
Sbjct: 183 FGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGEDGTCKYS 242

Query: 198 SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPM 257
           +ENVGVQVLDSVNITLGAEDEL+HAVGL+RPVS+AFEV+  FR YKSGVYS + CG TPM
Sbjct: 243 AENVGVQVLDSVNITLGAEDELKHAVGLLRPVSIAFEVIHSFRLYKSGVYSDSHCGQTPM 302

Query: 258 DVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           DVNHAV+AVGYG+EDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 303 DVNHAVLAVGYGIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 359


>gi|79314271|ref|NP_001030812.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|332644501|gb|AEE78022.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 357

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/361 (66%), Positives = 276/361 (76%), Gaps = 51/361 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           M+  + L SS++L+L   AAA++    FD+SNPI++VS D L + E +V+Q++GQ+RH L
Sbjct: 1   MSVKLNLSSSILLILF--AAAASKEIGFDESNPIKMVS-DNLHELEDTVVQILGQSRHVL 57

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SF+RF  RYGK Y+SVEEMKLRF+ F +NLDLIRSTN KGLSY+L LN            
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQR 117

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVK+QGHCGSCWTFSTTG+LEAA
Sbjct: 118 YKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAA 177

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           YHQAFGKGISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 
Sbjct: 178 YHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG 237

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFS++N+GVQV DSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  CG
Sbjct: 238 CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCG 297

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NTPMDVNHAV+AVGYGVED VPYWLIKNSWG  WGD+GYFKMEMGKNMC +ATC+SYPVV
Sbjct: 298 NTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC-VATCSSYPVV 356

Query: 314 A 314
           A
Sbjct: 357 A 357


>gi|158148921|dbj|BAF81994.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 359

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/361 (67%), Positives = 271/361 (75%), Gaps = 49/361 (13%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MAR V   S +++L+ C A ASA  SSF D NPI+ V SDGLR+ E SVLQVIGQ RH+L
Sbjct: 1   MAR-VSPASFLLILIACVAGASA-GSSFADQNPIKQVVSDGLRELEASVLQVIGQTRHSL 58

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           +FARFA RYGK YE+ EEMK RF+ F  +L +IRS N KGLSY LG+N            
Sbjct: 59  AFARFAHRYGKSYETAEEMKRRFSIFVDSLKMIRSHNKKGLSYTLGVNEFADLTWEEFRK 118

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVK+QGHCGSCWTFSTTG+LEAA
Sbjct: 119 HRLGAAQNCSATLKGNHKLTNGLLPLKKDWREVGIVTPVKNQGHCGSCWTFSTTGALEAA 178

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           Y QAFGK I LSEQQLVDCA+A+NN GCNGGLPSQAFEYIK NGGLDTEEAYPYTG DGV
Sbjct: 179 YVQAFGKAIFLSEQQLVDCARAYNNFGCNGGLPSQAFEYIKANGGLDTEEAYPYTGVDGV 238

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFSSEN+GVQVLDSVNITLGAEDEL+ AV  VRPVSVAFEVV GFR YKSGVY+S  CG
Sbjct: 239 CKFSSENIGVQVLDSVNITLGAEDELKDAVAFVRPVSVAFEVVSGFRLYKSGVYTSDTCG 298

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NTPMDVNHAVVAVGYGVE+ VPYWLIKNSWG +WGD+GYFKMEMGKNMCG+ATCASYPVV
Sbjct: 299 NTPMDVNHAVVAVGYGVENDVPYWLIKNSWGADWGDNGYFKMEMGKNMCGVATCASYPVV 358

Query: 314 A 314
           A
Sbjct: 359 A 359


>gi|8347420|dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/356 (67%), Positives = 272/356 (76%), Gaps = 51/356 (14%)

Query: 10  SVILLLCCA----AAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARF 65
           S++L L  A    A+A A  ++F D NPIR V SDGL + E ++LQV+G+ RHALSFARF
Sbjct: 5   SLLLALVVAGGLFASALAGPATFADENPIRQVVSDGLHELENAILQVVGKTRHALSFARF 64

Query: 66  ARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------------- 108
           A RYGK YESVEE+K RF  F  NL +IRS N KGLSY+LG+N                 
Sbjct: 65  AHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRDRLGA 124

Query: 109 ------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
                                         +SPVK+QG CGSCWTFSTTG+LEAAY QAF
Sbjct: 125 AQNCSATTKGNLKVTNVVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAF 184

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           GKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTGK+G+CKFSS
Sbjct: 185 GKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLCKFSS 244

Query: 199 ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMD 258
           ENVGV+V+DSVNITLGAEDEL++AV LVRPVS+AFEV+ GF+ YKSGVY+ST+CGNTPMD
Sbjct: 245 ENVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMD 304

Query: 259 VNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 305 VNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVVA 360


>gi|449452572|ref|XP_004144033.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
 gi|449500499|ref|XP_004161114.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
          Length = 356

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/361 (66%), Positives = 269/361 (74%), Gaps = 52/361 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MA  +  VSS++L+L CA A S     FDDSNPIR+VS D LR+ E  V++V+GQ  HAL
Sbjct: 1   MASRLFFVSSLLLVLSCAVAGSV----FDDSNPIRMVS-DRLRELELEVVRVLGQVPHAL 55

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
            FARFA RYGK YE+ EEMKLRF  F ++L+LI+STN +GLSY+LG+N            
Sbjct: 56  RFARFAHRYGKKYETAEEMKLRFGIFLESLELIKSTNKQGLSYKLGVNQFADWTWEEFRK 115

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVKDQGHCGSCWTFSTTG+LEAA
Sbjct: 116 HRLGAAQNCSATTKGSHKLTDTALPESKDWRKDGIVSPVKDQGHCGSCWTFSTTGALEAA 175

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           Y QA GKGISLSEQQLVDC + FNN GCNGGLPSQAFEYIKYNGGLDTEEAYPYTG DG 
Sbjct: 176 YAQAHGKGISLSEQQLVDCGRGFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGVDGS 235

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKF  ENVGVQV+DSVNITLGAEDEL+HAV  VRPVSVAFEVV GFR Y  GVY+S  CG
Sbjct: 236 CKFVPENVGVQVIDSVNITLGAEDELKHAVAFVRPVSVAFEVVSGFRLYSKGVYTSNSCG 295

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           +TPMDVNHAV+AVGYGVEDG+PYWLIKNSWG NWGD+GYFKMEMGKNMCG+ATCASYP+V
Sbjct: 296 STPMDVNHAVLAVGYGVEDGIPYWLIKNSWGGNWGDNGYFKMEMGKNMCGVATCASYPIV 355

Query: 314 A 314
           A
Sbjct: 356 A 356


>gi|79331505|ref|NP_001032106.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009931|gb|AED97314.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 357

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/334 (70%), Positives = 262/334 (78%), Gaps = 49/334 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FD+SNPIR+VS DGLR+ E SV Q++GQ+RH LSFARF  RYGK Y++VEEMKLRF+ F 
Sbjct: 26  FDESNPIRMVS-DGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFK 84

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           +NLDLIRSTN KGLSY+LG+N                                       
Sbjct: 85  ENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPET 144

Query: 109 --------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
                   +SPVKDQG CGSCWTFSTTG+LEAAYHQAFGKGISLSEQQLVDCA AFNN G
Sbjct: 145 KDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGLPSQAFEYIK NGGLDTE+AYPYTGKD  CKFS+ENVGVQVL+SVNITLGAEDEL+
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELK 264

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWLIK
Sbjct: 265 HAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIK 324

Query: 281 NSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NSWG +WGD GYFKMEMGKNMC IATCASYPVVA
Sbjct: 325 NSWGADWGDKGYFKMEMGKNMC-IATCASYPVVA 357


>gi|28192371|gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum]
          Length = 360

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 239/356 (67%), Positives = 271/356 (76%), Gaps = 51/356 (14%)

Query: 10  SVILLLCCA----AAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARF 65
           S++L L  A    A+A A  ++F D NPIR V SDGL + E ++LQV+G+ RHALS ARF
Sbjct: 5   SLLLALVVAGGLFASALAGPATFADENPIRQVVSDGLHELENAILQVVGKTRHALSSARF 64

Query: 66  ARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------------- 108
           A RYGK YESVEE+K RF  F  NL +IRS N KGLSY+LG+N                 
Sbjct: 65  AHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRDRLGA 124

Query: 109 ------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
                                         +SPVK+QG CGSCWTFSTTG+LEAAY QAF
Sbjct: 125 AQNCSATTKGNLKVTNVVLPETKGWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAF 184

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           GKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTGK+G+CKFSS
Sbjct: 185 GKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLCKFSS 244

Query: 199 ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMD 258
           ENVGV+V+DSVNITLGAEDEL++AV LVRPVS+AFEV+ GF+ YKSGVY+ST+CGNTPMD
Sbjct: 245 ENVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMD 304

Query: 259 VNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 305 VNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVVA 360


>gi|297793593|ref|XP_002864681.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310516|gb|EFH40940.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/344 (67%), Positives = 266/344 (77%), Gaps = 49/344 (14%)

Query: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA 66
           ++SSV+L++  AA+A+A    FD+ NPIR+VS DGLR+ E +V Q++GQ+RH L+FARF 
Sbjct: 6   VLSSVVLVILIAASAAADIG-FDELNPIRMVS-DGLREVEETVSQILGQSRHVLTFARFT 63

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------ 108
            RYGK Y++VEEMKLRF+ F +NLDLIRSTN KGLSY+LG+N                  
Sbjct: 64  HRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAA 123

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        +SPVKDQG CGSCWTFSTTG+LEAAYHQAFG
Sbjct: 124 QNCSATLKGSHKLTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFG 183

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           KGISLSEQQLVDCA A+NN GCNGGLPSQAFEYIK NGGLDTEEAYPY GKDG CKFS+E
Sbjct: 184 KGISLSEQQLVDCAGAYNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYIGKDGTCKFSAE 243

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
           NVGVQVLDSVNITLGAEDEL+HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDV
Sbjct: 244 NVGVQVLDSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDV 303

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCG 303
           NHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCG
Sbjct: 304 NHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|158524604|gb|ABW71226.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/355 (67%), Positives = 269/355 (75%), Gaps = 47/355 (13%)

Query: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA 66
           L+ ++++     AAA A  ++F   NPIR V SDGL + E  +LQV+GQ+RHALSF RFA
Sbjct: 6   LLLALVVAGGLFAAALAGPATFAVENPIRQVVSDGLHELENGILQVVGQSRHALSFVRFA 65

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------ 108
            RYGK YESVEE+K RF  F  NL +IRS N KGLSY+LG+N                  
Sbjct: 66  HRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRDRLGAA 125

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        +SPVK+QG CGSCWTFSTTG+LEAAY QAFG
Sbjct: 126 QNCSATTKGNVKLTNAVLPETKDWREDGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAFG 185

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           KGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTGK+G+CKFSSE
Sbjct: 186 KGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLCKFSSE 245

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
           NVGV+V+DSVNITLGAEDEL++AV LVRPVS+AFEV+ GF+ YKSGVYSST+CGNTPMDV
Sbjct: 246 NVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYSSTECGNTPMDV 305

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NHAV+AVGYGVE+GVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 306 NHAVLAVGYGVENGVPYWLIKNSWGADWGDDGYFKMEMGKNMCGIATCASYPVVA 360


>gi|71482942|gb|AAZ32410.1| cysteine proteinase aleuran type [Nicotiana benthamiana]
          Length = 360

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/355 (66%), Positives = 270/355 (76%), Gaps = 47/355 (13%)

Query: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA 66
           L+ ++++     AAA A  ++F D NPIR + SDGL + E  +LQV+G+ RHAL FARFA
Sbjct: 6   LLLALVVAGGLFAAALAGPATFADENPIRQIVSDGLHELENGILQVVGKTRHALLFARFA 65

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------ 108
            RYGK YE+VEE+K RF  F  NL +IRS N KGLSY+LG+N                  
Sbjct: 66  HRYGKRYETVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDITWDEFRRDRLGAA 125

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        +SPVK+QG CGSCWTFSTTG+LEAAY QAFG
Sbjct: 126 QNCSATTKGNLKLTNVVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYGQAFG 185

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           KGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTEEAYPYTGK+G+CKFSSE
Sbjct: 186 KGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLCKFSSE 245

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
           NVGV+V+DSVNITLGAEDEL++AV LVRPVS+AFEV+ GF+ YKSGVY+ST+CGNTPMDV
Sbjct: 246 NVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDV 305

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 306 NHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVVA 360


>gi|6967097|emb|CAB72480.1| cysteine protease-like protein [Arabidopsis thaliana]
          Length = 377

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/349 (66%), Positives = 265/349 (75%), Gaps = 50/349 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           M+  + L SS++L+L   AAA++    FD+SNPI++VS D L + E +V+Q++GQ+RH L
Sbjct: 1   MSVKLNLSSSILLILF--AAAASKEIGFDESNPIKMVS-DNLHELEDTVVQILGQSRHVL 57

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SF+RF  RYGK Y+SVEEMKLRF+ F +NLDLIRSTN KGLSY+L LN            
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQR 117

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVK+QGHCGSCWTFSTTG+LEAA
Sbjct: 118 YKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAA 177

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           YHQAFGKGISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 
Sbjct: 178 YHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG 237

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFS++N+GVQV DSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  CG
Sbjct: 238 CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCG 297

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMC 302
           NTPMDVNHAV+AVGYGVED VPYWLIKNSWG  WGD+GYFKMEMGKNMC
Sbjct: 298 NTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|2677828|gb|AAB97142.1| cysteine protease [Prunus armeniaca]
          Length = 358

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/361 (65%), Positives = 267/361 (73%), Gaps = 50/361 (13%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MAR   ++S+ ++L+  A +  A+ASSFD+SNPIRLVS DGLR+ E  V+QV+G +R AL
Sbjct: 1   MARVTLVLSAALVLV--AISCGAAASSFDESNPIRLVS-DGLRELEQQVVQVLGNSRRAL 57

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
            FARFA RYGK YESVEEMKLR+  FS+N  LIRSTN KGL Y L +N            
Sbjct: 58  HFARFAHRYGKKYESVEEMKLRYEIFSENKKLIRSTNKKGLPYTLAVNRFADWSWEEFRR 117

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVKDQGHCGSCWTFSTTG+LEAA
Sbjct: 118 QRLGAAQNCSATTKGSHELTDAVLPESKNWREEGIVTPVKDQGHCGSCWTFSTTGALEAA 177

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           Y QAF K ISLSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGLDTE AYPY G DG 
Sbjct: 178 YVQAFRKQISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLDTEAAYPYVGTDGA 237

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CKFS+ENVGVQVLDSVNITLG E EL+HAV  VRPVSVAF+VV  FR YKSGVY+S  CG
Sbjct: 238 CKFSAENVGVQVLDSVNITLGDEQELKHAVAFVRPVSVAFQVVKSFRIYKSGVYTSDTCG 297

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           ++PMDVNHAV+AVGYG E GVP+WLIKNSWGE+WGD+GYFKME GKNMCG+ATCASYP+V
Sbjct: 298 SSPMDVNHAVLAVGYGEEGGVPFWLIKNSWGESWGDNGYFKMEFGKNMCGVATCASYPIV 357

Query: 314 A 314
           A
Sbjct: 358 A 358


>gi|258406688|gb|ACV72067.1| putative cysteine protease [Lathyrus sativus]
          Length = 350

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/352 (65%), Positives = 266/352 (75%), Gaps = 53/352 (15%)

Query: 10  SVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRY 69
           S++++L C   A+A   SF DSNPIR+VS     D E  +LQVIG++RHA+SFARFA RY
Sbjct: 5   SLLIVLFCVTTAAA-GFSFHDSNPIRMVS-----DAEEQLLQVIGESRHAVSFARFANRY 58

Query: 70  GKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------------------- 108
           GK+Y+SV+EMKLRF  FS+NL+LIRSTN + LSY+LG+N                     
Sbjct: 59  GKLYDSVDEMKLRFKIFSENLELIRSTNKRRLSYKLGVNHFADWTWEEFKSHRLGAAQNC 118

Query: 109 --------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
                                     +S VKDQGHCGSCWTFSTTG+LE+AY QAFGK I
Sbjct: 119 SATLKGNHKITDANLPDEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNI 178

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGL+TEE YPYTG +G+CKF+SENV 
Sbjct: 179 SLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLETEETYPYTGSNGLCKFTSENVA 238

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           ++VL SVNITLG+EDEL+HAV   RPVSVAFEVV  FR YKSGVY+ST CGNTPMDVNHA
Sbjct: 239 LKVLGSVNITLGSEDELKHAVAFARPVSVAFEVVHDFRLYKSGVYTSTACGNTPMDVNHA 298

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           V+AVGYG+EDG+PYW IKNSWG +WGDHGYFKMEMGKNMCG+ATC+SYPVVA
Sbjct: 299 VLAVGYGIEDGIPYWHIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVVA 350


>gi|145334857|ref|NP_001078774.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009932|gb|AED97315.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 361

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/323 (70%), Positives = 252/323 (78%), Gaps = 48/323 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FD+SNPIR+VS DGLR+ E SV Q++GQ+RH LSFARF  RYGK Y++VEEMKLRF+ F 
Sbjct: 26  FDESNPIRMVS-DGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFK 84

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           +NLDLIRSTN KGLSY+LG+N                                       
Sbjct: 85  ENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPET 144

Query: 109 --------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
                   +SPVKDQG CGSCWTFSTTG+LEAAYHQAFGKGISLSEQQLVDCA AFNN G
Sbjct: 145 KDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGLPSQAFEYIK NGGLDTE+AYPYTGKD  CKFS+ENVGVQVL+SVNITLGAEDEL+
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELK 264

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWLIK
Sbjct: 265 HAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIK 324

Query: 281 NSWGENWGDHGYFKMEMGKNMCG 303
           NSWG +WGD GYFKMEMGKNMCG
Sbjct: 325 NSWGADWGDKGYFKMEMGKNMCG 347


>gi|94420703|gb|ABF18679.1| cysteine protease [Medicago sativa]
          Length = 350

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/351 (66%), Positives = 259/351 (73%), Gaps = 54/351 (15%)

Query: 11  VILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYG 70
           +I+  C A AA+    SF DSNPIR+VS     D E  +LQVIG++RHA+SFARFA RYG
Sbjct: 7   LIVFFCVATAAAGL--SFHDSNPIRMVS-----DMEKQLLQVIGESRHAVSFARFANRYG 59

Query: 71  KIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---------------------- 108
           K Y++V+EMK RF  FS+NL LI STN K L Y LG+N                      
Sbjct: 60  KRYDTVDEMKRRFKIFSENLQLIESTNKKRLGYTLGVNHFADWTWEEFRSHRLGAAQNCS 119

Query: 109 -------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 143
                                    +S VKDQGHCGSCWTFSTTG+LE+AY QAFGK IS
Sbjct: 120 ATLKGNHRITDVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNIS 179

Query: 144 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV 203
           LSEQQLVDCA AFNN GCNGGLPSQAFEYIKYNGGL+TEEAYPYTG++G CKF+SE+V V
Sbjct: 180 LSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGQNGPCKFTSEDVAV 239

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAV 263
           QVL SVNITLGAEDEL+HAV   RPVSVAFEVVD FR YK GVY+ST CGNTPMDVNHAV
Sbjct: 240 QVLGSVNITLGAEDELKHAVAFARPVSVAFEVVDDFRLYKKGVYTSTTCGNTPMDVNHAV 299

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           +AVGYG+EDGVPYWLIKNSWG  WGDHGYFKMEMGKNMCG+ATC+SYPVVA
Sbjct: 300 LAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVVA 350


>gi|297819034|ref|XP_002877400.1| hypothetical protein ARALYDRAFT_323209 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323238|gb|EFH53659.1| hypothetical protein ARALYDRAFT_323209 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 317

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/302 (73%), Positives = 253/302 (83%), Gaps = 7/302 (2%)

Query: 19  AAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEE 78
           AAA+     FD+SNPI++VS D L + E +V+Q++GQ+RH LSF+RFA RYGK Y+SVEE
Sbjct: 17  AAAATKEIRFDESNPIKMVS-DNLHELEDNVVQILGQSRHVLSFSRFAHRYGKKYQSVEE 75

Query: 79  MKLRFATFSKNLDLIRSTNCKGLSYRLGLN------ISPVKDQGHCGSCWTFSTTGSLEA 132
           MKLRF+ F +NLDLIRSTN KGLSY+L LN          +           +TTG+LEA
Sbjct: 76  MKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLLLLLLLVNTTGALEA 135

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
           AYHQAFGKGISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG
Sbjct: 136 AYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 195

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKC 252
            CKFS++N+GVQVLDSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  C
Sbjct: 196 GCKFSAKNIGVQVLDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTC 255

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
           GNTPMDVNHAV+AVGYGVED VPYWLIKNSWG +WGD+GYFKMEMGKNMCG+ATC+SYPV
Sbjct: 256 GNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGDWGDNGYFKMEMGKNMCGVATCSSYPV 315

Query: 313 VA 314
           VA
Sbjct: 316 VA 317


>gi|1134882|emb|CAA92583.1| cysteine protease [Pisum sativum]
          Length = 350

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/352 (65%), Positives = 267/352 (75%), Gaps = 53/352 (15%)

Query: 10  SVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRY 69
           S++++L C A+A+A   SF DSNPIR+VS     D E  +LQVIG++RHA+SFARFA RY
Sbjct: 5   SLLIVLFCVASAAA-GFSFHDSNPIRMVS-----DVEEQLLQVIGESRHAVSFARFANRY 58

Query: 70  GKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------------------- 108
           GK Y+SV+EMKLRF  FS+NL+LIRS+N + LSY+LG+N                     
Sbjct: 59  GKRYDSVDEMKLRFKIFSENLELIRSSNKRRLSYKLGVNHFADWTWEEFRSHRLGAAQNC 118

Query: 109 --------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
                                     +S VKDQG CGSCWTFSTTG+LE+AY QAFGK I
Sbjct: 119 SATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAFGKNI 178

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGL+TEEAYPYTG +G+CKF SE+V 
Sbjct: 179 SLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSNGLCKFRSEHVA 238

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           V+VL SVNITLGAEDEL+HA+   RPVSVAFEVV  FR YKSGVY+ST CG+TPMDVNHA
Sbjct: 239 VKVLGSVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTSTACGSTPMDVNHA 298

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           V+AVGYG+EDG+PYWLIKNSWG +WGDHGYFKMEMGKNMCG+ATC+SYPVVA
Sbjct: 299 VLAVGYGIEDGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVVA 350


>gi|14422331|emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
          Length = 350

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/352 (64%), Positives = 267/352 (75%), Gaps = 53/352 (15%)

Query: 10  SVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRY 69
           S++++L C A+A+A   SF DSNPIR+VS     D E  +LQVIG++RHA+SFARFA RY
Sbjct: 5   SLLIVLFCVASAAA-GFSFHDSNPIRMVS-----DVEEQLLQVIGESRHAVSFARFANRY 58

Query: 70  GKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------------------- 108
           GK Y+SV+EMKLRF  FS+N++LIRS+N + LSY+LG+N                     
Sbjct: 59  GKRYDSVDEMKLRFKIFSENIELIRSSNKRRLSYKLGVNHFADWTWEEFRSHRLGAAQNC 118

Query: 109 --------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
                                     +S VKDQG CGSCWTFSTTG+LE+AY QAFGK I
Sbjct: 119 SATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAFGKNI 178

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGL+TEEAYPYTG +G+CKF SE+V 
Sbjct: 179 SLSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSNGLCKFRSEHVA 238

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           V+VL SVNITLGAEDEL+HA+   RPVSVAFEVV  FR YKSGVY+ST CG+TPMDVNHA
Sbjct: 239 VKVLGSVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTSTACGSTPMDVNHA 298

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           V+AVGYG+EDG+PYWLIKNSWG +WGDHGYFKMEMGKNMCG+ATC+SYPVVA
Sbjct: 299 VLAVGYGIEDGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVVA 350


>gi|388513209|gb|AFK44666.1| unknown [Lotus japonicus]
 gi|388514955|gb|AFK45539.1| unknown [Lotus japonicus]
          Length = 352

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/342 (66%), Positives = 254/342 (74%), Gaps = 52/342 (15%)

Query: 20  AASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEM 79
           AA+A +SSF+DSNPIRLVS     D E  VLQVIGQ RHA+SFARFA +YGK Y+SVEE+
Sbjct: 16  AAAAGSSSFEDSNPIRLVS-----DLEEQVLQVIGQTRHAVSFARFASKYGKRYDSVEEI 70

Query: 80  KLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------------------- 108
           + RF  FS+NL+LI+STN K LSY+LGLN                               
Sbjct: 71  QHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKL 130

Query: 109 ----------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 152
                           +S VKDQ HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDC
Sbjct: 131 TDAVLPAEKDWRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDC 190

Query: 153 AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT 212
           A AFNN GCNGGLPSQAFEYIKYNGG+  E+ YPYT KD  CKF++ENV V+VLDSVNIT
Sbjct: 191 AGAFNNFGCNGGLPSQAFEYIKYNGGIALEKEYPYTAKDEACKFTAENVAVRVLDSVNIT 250

Query: 213 LGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 272
           LGAEDEL+HAV   RPVSVAF+VVDGFR YK GVY+S  CGNTPMDVNHAV+AVGYGVE+
Sbjct: 251 LGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVEN 310

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
            VPYW+IKNSWG  WGDHGYFKME+GKNMCG+ATCASYP+VA
Sbjct: 311 NVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 352


>gi|356565778|ref|XP_003551114.1| PREDICTED: thiol protease aleurain-like [Glycine max]
          Length = 353

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/362 (65%), Positives = 266/362 (73%), Gaps = 57/362 (15%)

Query: 1   MARPVQLVSSVILLLCCAAAASAS-ASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHA 59
           MAR    +S +I   C  A A A   SSFDD+NPIRL S     D E+ VL VIGQ+RHA
Sbjct: 1   MAR----LSLLIFAFCAVAVAVAVAGSSFDDANPIRLAS-----DLESQVLDVIGQSRHA 51

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           LSFARFARR+GK Y SV+E++ RF  FS NL LIRSTN + L+Y LG+N           
Sbjct: 52  LSFARFARRHGKRYRSVDEIRNRFRIFSDNLKLIRSTNRRSLTYTLGVNHFADWTWEEFT 111

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               +S VKDQG+CGSCWTFSTTG+LEA
Sbjct: 112 RHKLGAPQNCSATLKGNHRLTDAVLPDEKDWRKEGIVSQVKDQGNCGSCWTFSTTGALEA 171

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
           AY QAFGK ISLSEQQLVDCA AFNN GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG
Sbjct: 172 AYAQAFGKNISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 231

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKC 252
           VCKF+++NV V+V+DS+NITLGAEDEL+ AV  VRPVSVAFEV   FRFY +GVY+ST C
Sbjct: 232 VCKFTAKNVAVRVIDSINITLGAEDELKQAVAFVRPVSVAFEVAKDFRFYNNGVYTSTIC 291

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G+TPMDVNHAV+AVGYGVEDGVPYW+IKNSWG NWGD+GYFKME+GKNMCG+ATCASYPV
Sbjct: 292 GSTPMDVNHAVLAVGYGVEDGVPYWIIKNSWGSNWGDNGYFKMELGKNMCGVATCASYPV 351

Query: 313 VA 314
           VA
Sbjct: 352 VA 353


>gi|945081|gb|AAC49361.1| P21 [Petunia x hybrida]
          Length = 358

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/343 (66%), Positives = 257/343 (74%), Gaps = 47/343 (13%)

Query: 19  AAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEE 78
           A A A  ++F D NPIR V SD   + E+ +L V+GQ RHALSFARFARRYGK Y+SVEE
Sbjct: 16  AVAFARTANFADENPIRQVVSDSFHELESGILHVVGQTRHALSFARFARRYGKRYDSVEE 75

Query: 79  MKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------------------ 108
           +K RF  F  NL++I S N KGLSY+LG+N                              
Sbjct: 76  IKQRFDIFLDNLEMINSHNDKGLSYKLGVNEFSDLTWDEFRRDRLGAAQNCSATTKGNLK 135

Query: 109 -----------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVD 151
                            +SPVK+QG CGSCWTFSTTG+LEAAY Q FGKGISLSEQQLVD
Sbjct: 136 LRDAVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYTQKFGKGISLSEQQLVD 195

Query: 152 CAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNI 211
           CA AFNN GCNGGLPSQAFEYIK NGGL+TEEAYPYTGK+G+CKFSS+NVGV+V DSVNI
Sbjct: 196 CAGAFNNFGCNGGLPSQAFEYIKSNGGLETEEAYPYTGKNGLCKFSSQNVGVKVTDSVNI 255

Query: 212 TLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 271
           TLGAEDEL++AV LVRPVSVAFEVV GF+ YKSGVY+ST+CG TPMDVNHAV+AVGYGVE
Sbjct: 256 TLGAEDELKYAVALVRPVSVAFEVVKGFKQYKSGVYTSTECGTTPMDVNHAVLAVGYGVE 315

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
            GVP+WLIKNSWG +WGD+ YFKMEMG +MCGIATCASYPVVA
Sbjct: 316 YGVPFWLIKNSWGADWGDNAYFKMEMGNDMCGIATCASYPVVA 358


>gi|388491952|gb|AFK34042.1| unknown [Lotus japonicus]
          Length = 352

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/342 (65%), Positives = 252/342 (73%), Gaps = 52/342 (15%)

Query: 20  AASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEM 79
           AA+A +SSF+DSNPIRLVS     D E  VLQVIGQ RHA SFARFA +YGK Y+SVEE+
Sbjct: 16  AAAAGSSSFEDSNPIRLVS-----DLEEQVLQVIGQTRHAASFARFASKYGKRYDSVEEI 70

Query: 80  KLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------------------- 108
           + RF  FS+NL+LI+STN K LSY+LGLN                               
Sbjct: 71  QHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHKL 130

Query: 109 ----------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 152
                           +S VKDQ HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDC
Sbjct: 131 TDAVLSAEKDWRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDC 190

Query: 153 AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT 212
           A AFNN GCNGGLPSQAFEYIKYNGG+  E+ YPYT KD   KF++ENV V+VLDSVNIT
Sbjct: 191 AGAFNNFGCNGGLPSQAFEYIKYNGGIALEKEYPYTAKDEASKFTAENVAVRVLDSVNIT 250

Query: 213 LGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 272
           LGAEDEL+HAV   RPVSVAF+VVDGFR YK GVY+S  CGNTPMDVNHAV+AVGYGVE+
Sbjct: 251 LGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVEN 310

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
            VPYW+IKNSWG  WGDHGYFKME+GKNMCG+ATCASYP+VA
Sbjct: 311 NVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIVA 352


>gi|155970232|gb|ABU41785.1| cysteine protease [Rosa x borboniana]
          Length = 357

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/340 (67%), Positives = 255/340 (75%), Gaps = 48/340 (14%)

Query: 22  SASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKL 81
           + +ASSFD+S+PIRLV  DGLR+ E  V+QV+GQ  H  SFARFA RY K YESVEEM  
Sbjct: 19  TCAASSFDESSPIRLVP-DGLRELEDQVVQVLGQVCHVRSFARFAYRYEKRYESVEEMGR 77

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLN--------------------------------- 108
           RF  F++N  LIRSTN KGLSY+LG+N                                 
Sbjct: 78  RFEIFAENKKLIRSTNRKGLSYKLGVNRFADWTWEEFQRHRLGAAQNCSATTKGNHKLTD 137

Query: 109 --------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 154
                         ++PVKDQGHCGSCWTFSTTG+LEAAY QAFGK IS SEQQLVDCA 
Sbjct: 138 AVPPLTKNWRDEGIVTPVKDQGHCGSCWTFSTTGALEAAYVQAFGKQISPSEQQLVDCAG 197

Query: 155 AFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLG 214
           AFNN GC+GGLPSQAFEYIKYNGGLDTE+AYPYT  DG CKFSSENVGV+VLDSVNITL 
Sbjct: 198 AFNNFGCSGGLPSQAFEYIKYNGGLDTEQAYPYTAVDGACKFSSENVGVRVLDSVNITLN 257

Query: 215 AEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV 274
            E+EL+HAV  VRPVSVAF+VV  FR YKSGVY+S  CGNTPMDVNHAV+AVGYGVE+GV
Sbjct: 258 DEEELKHAVAFVRPVSVAFQVVQDFRLYKSGVYTSETCGNTPMDVNHAVLAVGYGVENGV 317

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           PYWLIKNSWG++WGD+GYFKME GKNMCG+ATCASYPVVA
Sbjct: 318 PYWLIKNSWGQSWGDNGYFKMEYGKNMCGVATCASYPVVA 357


>gi|1706261|sp|Q10717.1|CYSP2_MAIZE RecName: Full=Cysteine proteinase 2; Flags: Precursor
 gi|644490|dbj|BAA08245.1| cysteine proteinase [Zea mays]
          Length = 360

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/353 (63%), Positives = 253/353 (71%), Gaps = 49/353 (13%)

Query: 11  VILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYG 70
           V+ ++  A  A+   S F DSNPIR V+       E++V   +G+ R AL FARFA RYG
Sbjct: 8   VLAVVVLADTAAVVNSGFADSNPIRPVTDRAASALESTVFAALGRTRDALRFARFAVRYG 67

Query: 71  KIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---------------------- 108
           K YES  E+  RF  FS++L L+RSTN KGLSYRLG+N                      
Sbjct: 68  KSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCS 127

Query: 109 ---------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
                                      +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK 
Sbjct: 128 ATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKP 187

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           ISLSEQQLVDC  AFNN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+CKF +ENV
Sbjct: 188 ISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENV 247

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNH 261
           GV+VLDSVNITLGAEDEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNH
Sbjct: 248 GVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNH 307

Query: 262 AVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           AV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 308 AVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360


>gi|148927396|gb|ABR19829.1| cysteine proteinase [Elaeis guineensis]
          Length = 358

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/361 (63%), Positives = 263/361 (72%), Gaps = 51/361 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MAR +  ++ V L    +A  + +  +FD++N I+ V+ + +   ETS+L V+GQ R+AL
Sbjct: 1   MARFLAFLALVFL---SSAILARANHAFDEANLIQSVT-ERIDSLETSLLGVLGQTRNAL 56

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
            FARFA RYGK Y+SVEEMKLRFA F +NL+LIRSTN +GL Y+LG+N            
Sbjct: 57  HFARFAHRYGKRYQSVEEMKLRFAIFMENLELIRSTNRRGLPYKLGINRYADMSWEEFRA 116

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              +SPVKDQG CGSCWTFSTTG+LEAA
Sbjct: 117 SRLGAAQNCSATLKGNHKMTDELLPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGALEAA 176

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           Y QA GKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G 
Sbjct: 177 YTQATGKGISLSEQQLVDCAYAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYAGVNGF 236

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           C F  ENVGV+V++SVNITLGAEDEL HAVGLVRPVS+AFEVV GFRFYK GVY+S  CG
Sbjct: 237 CHFKPENVGVKVVESVNITLGAEDELLHAVGLVRPVSIAFEVVSGFRFYKGGVYTSDTCG 296

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            T MDVNHAV+AVGYGVE+GVPYWLIKNSWGE WG  GYFKME+GKNMCGIATCASYP+V
Sbjct: 297 RTQMDVNHAVLAVGYGVENGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGIATCASYPIV 356

Query: 314 A 314
           A
Sbjct: 357 A 357


>gi|194689248|gb|ACF78708.1| unknown [Zea mays]
 gi|414885653|tpg|DAA61667.1| TPA: cysteine protease2 [Zea mays]
          Length = 360

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/338 (65%), Positives = 246/338 (72%), Gaps = 49/338 (14%)

Query: 26  SSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFAT 85
           S F DSNPIR V+       E++V   +G+ R AL FARFA RYGK YES  E+  RF  
Sbjct: 23  SGFADSNPIRPVTDRAASALESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRI 82

Query: 86  FSKNLDLIRSTNCKGLSYRLGLN------------------------------------- 108
           FS++L L+RSTN KGLSYRLG+N                                     
Sbjct: 83  FSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVA 142

Query: 109 ------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
                       +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK ISLSEQQL+DC  AF
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAF 202

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
           NN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+CKF +ENVGV+VLDSVNITLGAE
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAE 262

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           DEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPY
Sbjct: 263 DELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPY 322

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           WLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 323 WLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360


>gi|162460343|ref|NP_001105479.1| cysteine protease2 precursor [Zea mays]
 gi|1491774|emb|CAA68192.1| cysteine protease [Zea mays]
          Length = 360

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/338 (65%), Positives = 245/338 (72%), Gaps = 49/338 (14%)

Query: 26  SSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFAT 85
           S F DSNPIR V+       E++V   +G+ R AL FARFA RYGK YES  E+  RF  
Sbjct: 23  SGFADSNPIRPVTDRAASALESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRI 82

Query: 86  FSKNLDLIRSTNCKGLSYRLGLN------------------------------------- 108
           FS++L L+RSTN KGLSYRLG+N                                     
Sbjct: 83  FSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVA 142

Query: 109 ------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
                       +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDC  AF
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGLAF 202

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
           NN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+ KF +ENVGV+VLDSVNITLGAE
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGISKFKNENVGVKVLDSVNITLGAE 262

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           DEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPY
Sbjct: 263 DELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPY 322

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           WLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 323 WLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360


>gi|195624522|gb|ACG34091.1| thiol protease aleurain precursor [Zea mays]
          Length = 360

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/338 (64%), Positives = 245/338 (72%), Gaps = 49/338 (14%)

Query: 26  SSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFAT 85
           S F DSNPIR V+       E++V   +G+ R AL FARFA RYGK YES  E+  RF  
Sbjct: 23  SGFADSNPIRPVTDRAASALESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRI 82

Query: 86  FSKNLDLIRSTNCKGLSYRLGLN------------------------------------- 108
           FS++L L+RSTN KGLSYRLG+N                                     
Sbjct: 83  FSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVA 142

Query: 109 ------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
                       +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK ISLSEQQL+DC  AF
Sbjct: 143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAF 202

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
           NN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+CKF +ENVG +VLDSVNITLGAE
Sbjct: 203 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGFKVLDSVNITLGAE 262

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           DEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPY
Sbjct: 263 DELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPY 322

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           WLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 323 WLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360


>gi|2499879|sp|Q40143.1|CYSP3_SOLLC RecName: Full=Cysteine proteinase 3; Flags: Precursor
 gi|1235545|emb|CAA88629.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 356

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/355 (63%), Positives = 260/355 (73%), Gaps = 53/355 (14%)

Query: 10  SVILLLCCA--AAASASASSFDDSNPIR-LVSSDGLRDFETSVLQVIGQARHALSFARFA 66
           S++L+L     A A A  ++F D NPIR +V  D   + E  +LQV+GQ R ALSFARFA
Sbjct: 5   SLVLILVAGLFATALAGPATFADKNPIRQVVFPD---ELENGILQVVGQTRSALSFARFA 61

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------ 108
            R+ K Y+SVEE+K RF  F  NL +IRS N KGLSY+LG+N                  
Sbjct: 62  IRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGAS 121

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        +SPVK QG CGSCWTFSTTG+LEAAY QAFG
Sbjct: 122 QNCSATTKGNLKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFG 181

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           KGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK+NGGLDTEEAYPYTGK+G+CKFS  
Sbjct: 182 KGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQA 241

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
           N+GV+V+ SVNITLGAE EL++AV LVRPVSVAFEVV GF+ YKSGVY+ST+CG+TPMDV
Sbjct: 242 NIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDV 301

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           NHAV+AVGYGVE+G PYWLIKNSWG +WG+ GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 302 NHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIVA 356


>gi|218202220|gb|EEC84647.1| hypothetical protein OsI_31538 [Oryza sativa Indica Group]
          Length = 363

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/335 (63%), Positives = 249/335 (74%), Gaps = 48/335 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FDDSNPIR V+       E++V+  +G+ R AL FARFA R+GK Y    E++ RF  FS
Sbjct: 29  FDDSNPIRSVTDQAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFS 88

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           ++L+L+RSTN +GL YRLG+N                                       
Sbjct: 89  ESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAAALPE 148

Query: 109 ---------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQ 159
                    +SPVKDQGHCGSCWTFSTTGSLEAAY QA GK +SLSEQQLVDCA A+NN 
Sbjct: 149 TKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNF 208

Query: 160 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  ENVGV+VLDSVNITLGAEDEL
Sbjct: 209 GCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDEL 268

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           ++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLI
Sbjct: 269 KNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLI 328

Query: 280 KNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           KNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct: 329 KNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 363


>gi|115479391|ref|NP_001063289.1| Os09g0442300 [Oryza sativa Japonica Group]
 gi|115510968|sp|P25778.2|ORYC_ORYSJ RecName: Full=Oryzain gamma chain; Flags: Precursor
 gi|51535997|dbj|BAD38077.1| putative oryzain gamma chain precursor [Oryza sativa Japonica
           Group]
 gi|113631522|dbj|BAF25203.1| Os09g0442300 [Oryza sativa Japonica Group]
 gi|215694919|dbj|BAG90110.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 362

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/335 (63%), Positives = 249/335 (74%), Gaps = 48/335 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FDDSNPIR V+       E++V+  +G+ R AL FARFA R+GK Y    E++ RF  FS
Sbjct: 28  FDDSNPIRSVTDHAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFS 87

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           ++L+L+RSTN +GL YRLG+N                                       
Sbjct: 88  ESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAAALPE 147

Query: 109 ---------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQ 159
                    +SPVKDQGHCGSCWTFSTTGSLEAAY QA GK +SLSEQQLVDCA A+NN 
Sbjct: 148 TKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNF 207

Query: 160 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  ENVGV+VLDSVNITLGAEDEL
Sbjct: 208 GCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDEL 267

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           ++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLI
Sbjct: 268 KNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLI 327

Query: 280 KNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           KNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct: 328 KNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 362


>gi|149392541|gb|ABR26073.1| oryzain gamma chain precursor [Oryza sativa Indica Group]
          Length = 367

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/335 (63%), Positives = 249/335 (74%), Gaps = 48/335 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FDDSNPIR V+       E++V+  +G+ R AL FARFA R+GK Y    E++ RF  FS
Sbjct: 33  FDDSNPIRSVTDQAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFS 92

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           ++L+L+RSTN +GL YRLG+N                                       
Sbjct: 93  ESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAAALPE 152

Query: 109 ---------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQ 159
                    +SPVKDQGHCGSCWTFSTTGSLEAAY QA GK +SLSEQQLVDCA A+NN 
Sbjct: 153 TKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNF 212

Query: 160 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  ENVGV+VLDSVNITLGAEDEL
Sbjct: 213 GCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDEL 272

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           ++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLI
Sbjct: 273 KNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLI 332

Query: 280 KNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           KNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct: 333 KNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 367


>gi|242044818|ref|XP_002460280.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
 gi|241923657|gb|EER96801.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
          Length = 363

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/338 (64%), Positives = 246/338 (72%), Gaps = 49/338 (14%)

Query: 26  SSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFAT 85
           S F DSN IR V+       E++V   +G+ R AL FARFA RYGK YES  E++ RF  
Sbjct: 26  SDFADSNTIRSVTDRAASALESTVFGALGRTRDALRFARFAVRYGKSYESAAEVQKRFRI 85

Query: 86  FSKNLDLIRSTNCKGLSYRLGLN------------------------------------- 108
           FS++L L+RSTN KGLSYRLG+N                                     
Sbjct: 86  FSESLQLVRSTNRKGLSYRLGINRFSDMSWEEFRATRLGAAQNCSATLAGNHRMRAAAVA 145

Query: 109 ------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
                       +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDC + F
Sbjct: 146 LPKTKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGKPF 205

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
           NN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+C F +ENVGV+VLDSVNITLGAE
Sbjct: 206 NNFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNGICDFKAENVGVKVLDSVNITLGAE 265

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           DEL+ AV LVRPVSVAF+VV+GFR YKSGVY+S  CGNTPMDVNHAV+AVGYGVE+GVPY
Sbjct: 266 DELKDAVALVRPVSVAFQVVNGFRQYKSGVYTSDSCGNTPMDVNHAVLAVGYGVENGVPY 325

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           WLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 326 WLIKNSWGADWGDKGYFKMEMGKNMCGVATCASYPIVA 363


>gi|388521567|gb|AFK48845.1| unknown [Medicago truncatula]
          Length = 343

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/351 (63%), Positives = 252/351 (71%), Gaps = 61/351 (17%)

Query: 11  VILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYG 70
           +I+  C A AA+    SF DSNPIR+VS     D E  +LQVIG++R       FA RYG
Sbjct: 7   LIVFFCVATAAAGL--SFHDSNPIRMVS-----DMEEQLLQVIGESR-------FANRYG 52

Query: 71  KIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---------------------- 108
           K Y++V+EMK RF  FS+NL LI+STN K L Y LG+N                      
Sbjct: 53  KRYDTVDEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEFRSHRLGAAQNCS 112

Query: 109 -------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 143
                                    +S VKDQGHCGSCWTFSTTG+LE+AY QAFGK IS
Sbjct: 113 ATLKGNHRITDVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNIS 172

Query: 144 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV 203
           LSEQQLVDCA A+NN GCNGGLPSQAFEYIKYNGGL+TEE YPYTG++G+CKF+SENV V
Sbjct: 173 LSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLETEEVYPYTGQNGLCKFTSENVAV 232

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAV 263
           QVL SVNITLGAEDEL+HAV   RPVSVAF+VVD FR YK GVY+ T CG+TPMDVNHAV
Sbjct: 233 QVLGSVNITLGAEDELKHAVAFARPVSVAFQVVDDFRLYKKGVYTGTTCGSTPMDVNHAV 292

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           +AVGYG+EDGVPYWLIKNSWG  WGDHGYFKMEMGKNMCG+ATC+SYPVVA
Sbjct: 293 LAVGYGIEDGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVVA 343


>gi|357158628|ref|XP_003578189.1| PREDICTED: thiol protease aleurain-like [Brachypodium distachyon]
          Length = 363

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/335 (63%), Positives = 242/335 (72%), Gaps = 48/335 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           F DSN IR V+       E++++  +G++RHAL FARFA RYGK YES  E++ RF  FS
Sbjct: 28  FTDSNLIRPVTERAATALESTIVAALGRSRHALRFARFAVRYGKSYESAAEVQRRFRIFS 87

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           ++L+ +RSTN KGLSYRLG+N                                       
Sbjct: 88  ESLEEVRSTNQKGLSYRLGINRYSDMSWEEFQASRLGAAQTCSATLRGNHRMQDANALPE 147

Query: 109 ---------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQ 159
                    +SPVKDQ HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDCA A+NN 
Sbjct: 148 TKDWREDGIVSPVKDQSHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGAYNNF 207

Query: 160 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +GVC +  EN  VQVLDSVNITL AEDEL
Sbjct: 208 GCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNGVCHYKPENAAVQVLDSVNITLNAEDEL 267

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           Q+AVGLVRPVSVAFEV++GFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+G PYWLI
Sbjct: 268 QNAVGLVRPVSVAFEVINGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGTPYWLI 327

Query: 280 KNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           KNSWGE+WGD GYFKME GKNMC +ATCASYP+VA
Sbjct: 328 KNSWGESWGDKGYFKMERGKNMCAVATCASYPIVA 362


>gi|111073719|dbj|BAF02548.1| triticain gamma [Triticum aestivum]
          Length = 365

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/331 (63%), Positives = 241/331 (72%), Gaps = 48/331 (14%)

Query: 32  NPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLD 91
           NPIR V+       E++VL  +G+ RHAL FARFA RYGK YES  E++ RF  FS++L+
Sbjct: 34  NPIRPVTERAASTLESTVLAALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLE 93

Query: 92  LIRSTNCKGLSYRLGLN------------------------------------------- 108
            +RSTN KGLSYRLG+N                                           
Sbjct: 94  EVRSTNRKGLSYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDW 153

Query: 109 -----ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
                +SPVKDQ HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDCA  FNN GC+G
Sbjct: 154 REDGIVSPVKDQSHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCSG 213

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYIKYNGG+DTEE+YPY G +GVC + +EN  VQVLDSVNITL AEDEL++AV
Sbjct: 214 GLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAVVQVLDSVNITLNAEDELKNAV 273

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           GLVRPVSVAFEV++GFR YKSGVYSS  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSW
Sbjct: 274 GLVRPVSVAFEVINGFRQYKSGVYSSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSW 333

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           G +WGD+GYFKMEMGKNMC +ATCASYP+VA
Sbjct: 334 GADWGDNGYFKMEMGKNMCAVATCASYPIVA 364


>gi|113603|sp|P05167.1|ALEU_HORVU RecName: Full=Thiol protease aleurain; Flags: Precursor
 gi|19021|emb|CAA28804.1| aleurain [Hordeum vulgare]
          Length = 362

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/331 (63%), Positives = 240/331 (72%), Gaps = 48/331 (14%)

Query: 32  NPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLD 91
           NPIR V+       E++VL  +G+ RHAL FARFA RYGK YES  E++ RF  FS++L+
Sbjct: 31  NPIRPVTDRAASTLESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLE 90

Query: 92  LIRSTNCKGLSYRLGLN------------------------------------------- 108
            +RSTN KGL YRLG+N                                           
Sbjct: 91  EVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDW 150

Query: 109 -----ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
                +SPVK+Q HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDCA  FNN GCNG
Sbjct: 151 REDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNG 210

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYIKYNGG+DTEE+YPY G +GVC + +EN  VQVLDSVNITL AEDEL++AV
Sbjct: 211 GLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAV 270

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           GLVRPVSVAF+V+DGFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSW
Sbjct: 271 GLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSW 330

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           G +WGD+GYFKMEMGKNMC IATCASYPVVA
Sbjct: 331 GADWGDNGYFKMEMGKNMCAIATCASYPVVA 361


>gi|6851030|emb|CAB71032.1| cysteine protease [Lolium multiflorum]
          Length = 359

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/336 (62%), Positives = 242/336 (72%), Gaps = 48/336 (14%)

Query: 27  SFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATF 86
           SF DSNPIR V+       E++VL  +G+ RHAL FARFA R+GK Y S  E++ RF  F
Sbjct: 23  SFADSNPIRPVTERAASAVESTVLGALGRTRHALRFARFAVRHGKSYGSAAEVQRRFRIF 82

Query: 87  SKNLDLIRSTNCKGLSYRLGLN-------------------------------------- 108
           S++LD +RSTN KGLSY+LG+N                                      
Sbjct: 83  SESLDEVRSTNRKGLSYKLGINRFSDMTWEEFQATKLGAAQTCSATLAGNHLMRDANALP 142

Query: 109 ----------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
                     +SPVKDQ  CGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDCA A+NN
Sbjct: 143 ETKDWRETGIVSPVKDQASCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGAYNN 202

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGLPSQAFEYIKYNGG+DTEE+YPY G +GVCK+  EN  VQV DSVNITL AEDE
Sbjct: 203 FGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCKYRPENAAVQVADSVNITLNAEDE 262

Query: 219 LQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           L++AVGLVRPVSVAFEV+DGF+ YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWL
Sbjct: 263 LKNAVGLVRPVSVAFEVIDGFKQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWL 322

Query: 279 IKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           IKNSWG +WG+ GYFKMEMGKNMC +ATCASYP++A
Sbjct: 323 IKNSWGADWGEDGYFKMEMGKNMCAVATCASYPILA 358


>gi|326516056|dbj|BAJ88051.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 362

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/331 (63%), Positives = 239/331 (72%), Gaps = 48/331 (14%)

Query: 32  NPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLD 91
           NPIR V+       E++VL  +G+ RHAL FARFA  YGK YES  E++ RF  FS++L+
Sbjct: 31  NPIRPVTDRAASTLESAVLGALGRTRHALRFARFAVGYGKSYESAAEVRRRFRIFSESLE 90

Query: 92  LIRSTNCKGLSYRLGLN------------------------------------------- 108
            +RSTN KGL YRLG+N                                           
Sbjct: 91  EVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDW 150

Query: 109 -----ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
                +SPVK+Q HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDCA  FNN GCNG
Sbjct: 151 REDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNG 210

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYIKYNGG+DTEE+YPY G +GVC + +EN  VQVLDSVNITL AEDEL++AV
Sbjct: 211 GLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAV 270

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           GLVRPVSVAF+V+DGFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSW
Sbjct: 271 GLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSW 330

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           G +WGD+GYFKMEMGKNMC IATCASYPVVA
Sbjct: 331 GADWGDNGYFKMEMGKNMCAIATCASYPVVA 361


>gi|218185|dbj|BAA14404.1| oryzain gamma precursor [Oryza sativa Japonica Group]
          Length = 362

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/335 (61%), Positives = 241/335 (71%), Gaps = 48/335 (14%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS 87
           FDDSNPIR V+       E++V+  +G+ R AL FARFA R+GK Y    E++ RF  FS
Sbjct: 28  FDDSNPIRSVTDHAASALESTVIAALGRTRGALRFARFAVRHGKRYGDAAEVQRRFRIFS 87

Query: 88  KNLDLIRSTNCKGLSYRLGLN--------------------------------------- 108
           ++L+L+RSTN +GL YRLG+N                                       
Sbjct: 88  ESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAPALPE 147

Query: 109 ---------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQ 159
                    +SPVKDQGHCGSCW FSTTGSLEA Y QA G  +SLSEQQL DCA  +NN 
Sbjct: 148 TKDWREDGIVSPVKDQGHCGSCWPFSTTGSLEARYTQATGPPVSLSEQQLADCATRYNNF 207

Query: 160 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  EN GV+VLDSVNITL AEDEL
Sbjct: 208 GCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENAGVKVLDSVNITLVAEDEL 267

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           ++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLI
Sbjct: 268 KNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLI 327

Query: 280 KNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           KNSWG +WGD+GYF MEMGKNMCGIATCASYP+VA
Sbjct: 328 KNSWGADWGDNGYFTMEMGKNMCGIATCASYPIVA 362


>gi|356530431|ref|XP_003533785.1| PREDICTED: cysteine proteinase [Glycine max]
          Length = 354

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/333 (63%), Positives = 243/333 (72%), Gaps = 52/333 (15%)

Query: 29  DDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSK 88
           + +NPIR+VS       E  V++VIG+ R AL FARF  R+GK Y+S EEMK R+  FS+
Sbjct: 27  EAANPIRMVSG-----VEAEVVRVIGECRRALKFARFVSRFGKSYQSEEEMKERYEIFSQ 81

Query: 89  NLDLIRSTNCKGLSYRLGLN---------------------------------------- 108
           NL  IRS N K L Y L +N                                        
Sbjct: 82  NLRFIRSHNKKRLPYTLSVNHFADWTWEEFKRHRLGAAQNCSATLNGNHKLTDAVLPPTK 141

Query: 109 -------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGC 161
                  +S VKDQG CGSCWTFSTTG+LEAAY QAFGK ISLSEQQLVDCA  FNN GC
Sbjct: 142 DWRKEGIVSSVKDQGSCGSCWTFSTTGALEAAYAQAFGKSISLSEQQLVDCAGPFNNFGC 201

Query: 162 NGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQH 221
           +GGLPSQAFEYIKYNGGL+TEEAYPYTGKDGVCKFS+ENV VQVLDSVNITLGAEDEL+H
Sbjct: 202 HGGLPSQAFEYIKYNGGLETEEAYPYTGKDGVCKFSAENVAVQVLDSVNITLGAEDELKH 261

Query: 222 AVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKN 281
           AV  VRPVSVAF+VV+GF FY++GV++S  CG+T  DVNHAV+AVGYGVE+GVPYWLIKN
Sbjct: 262 AVAFVRPVSVAFQVVNGFHFYENGVFTSDTCGSTSQDVNHAVLAVGYGVENGVPYWLIKN 321

Query: 282 SWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           SWGE+WG++GYFKME+GKNMCG+ATCASYP+VA
Sbjct: 322 SWGESWGENGYFKMELGKNMCGVATCASYPIVA 354


>gi|222641669|gb|EEE69801.1| hypothetical protein OsJ_29533 [Oryza sativa Japonica Group]
          Length = 314

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/291 (68%), Positives = 229/291 (78%), Gaps = 8/291 (2%)

Query: 28  FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA----RRYGKIYESVEEMKLRF 83
           FDDSNPIR V+       E++V+  +G+ R AL FARFA    RR G    + +      
Sbjct: 28  FDDSNPIRSVTDHAASALESTVIAALGRTRDALRFARFAVRSFRRAGS--GAAQNCSATL 85

Query: 84  ATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 143
           A   +  D       K   +R    +SPVKDQGHCGSCWTFSTTGSLEAAY QA GK +S
Sbjct: 86  AGNHRMRDAAALPETK--DWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVS 143

Query: 144 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV 203
           LSEQQLVDCA A+NN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  ENVGV
Sbjct: 144 LSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGV 203

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAV 263
           +VLDSVNITLGAEDEL++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV
Sbjct: 204 KVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAV 263

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           +AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct: 264 LAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 314


>gi|116779845|gb|ABK21448.1| unknown [Picea sitchensis]
 gi|116791731|gb|ABK26088.1| unknown [Picea sitchensis]
 gi|224286276|gb|ACN40847.1| unknown [Picea sitchensis]
          Length = 357

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/361 (56%), Positives = 250/361 (69%), Gaps = 51/361 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MAR + +V S +L L  A +A   A SF+++  I +V+ D +++ E+S+ +++G    ++
Sbjct: 1   MARILAIVLSTLLALAIAVSA---ARSFEETEYIDMVT-DKIQNLESSLFKILGTNPKSV 56

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
            FA FA RYGK Y+SV ++  RF  F KN++LI S N   L Y L +N            
Sbjct: 57  QFAEFALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFADITWEEFHG 116

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             +SPVK+Q HCGSCWTFSTTG+LEAAY
Sbjct: 117 QYLGASQNCSATKSNHKFTDAQPPTKKDWREEGIVSPVKNQAHCGSCWTFSTTGALEAAY 176

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
            QA GK + LSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYT KDGVC
Sbjct: 177 TQATGKTVILSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTAKDGVC 236

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGN 254
            +   NVGV+V DSVNI+LGAEDEL+ AVGLVRPVSVAF+V+  FRFYK GV++ST CG 
Sbjct: 237 NYDVNNVGVKVADSVNISLGAEDELKSAVGLVRPVSVAFQVIQDFRFYKEGVFTSTTCGQ 296

Query: 255 TPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            PMDVNHAV+AVGYGV E+G P+W+IKNSWG++WG  GYFKMEMGKNMCG+ATCASYPVV
Sbjct: 297 GPMDVNHAVLAVGYGVSEEGTPHWIIKNSWGKSWGVEGYFKMEMGKNMCGVATCASYPVV 356

Query: 314 A 314
           +
Sbjct: 357 S 357


>gi|148908373|gb|ABR17300.1| unknown [Picea sitchensis]
          Length = 357

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/361 (56%), Positives = 250/361 (69%), Gaps = 51/361 (14%)

Query: 1   MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHAL 60
           MAR + +V S +L L  A +A   A SF+++  I +V+ D +++ E+S+ +++G    ++
Sbjct: 1   MARILAIVLSTLLALAIAVSA---ARSFEETEYIDMVT-DKIQNLESSLFKILGTNPKSV 56

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
            FA FA RYGK Y+SV ++  RF  F KN++LI S N   L Y L +N            
Sbjct: 57  QFAEFALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFADITWEEFHG 116

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             +SPVK+Q HCGSCWTFSTTG+LEAAY
Sbjct: 117 QYLGASQNCSATKSNHKFTDAQPPTKKDWREEGIVSPVKNQAHCGSCWTFSTTGALEAAY 176

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
            QA GK + LSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYT KDGVC
Sbjct: 177 TQATGKTVILSEQQLVDCAGAFNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTAKDGVC 236

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGN 254
            +   NVGV+V DSVNI+LGAED+L+ AVGLVRPVSVAF+V+  FRFYK GV++ST CG 
Sbjct: 237 NYDVNNVGVKVADSVNISLGAEDKLKSAVGLVRPVSVAFQVIQDFRFYKEGVFTSTTCGQ 296

Query: 255 TPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            PMDVNHAV+AVGYGV E+G P+W+IKNSWG++WG  GYFKMEMGKNMCG+ATCASYPVV
Sbjct: 297 GPMDVNHAVLAVGYGVSEEGTPHWIIKNSWGKSWGVEGYFKMEMGKNMCGVATCASYPVV 356

Query: 314 A 314
           +
Sbjct: 357 S 357


>gi|351724281|ref|NP_001237820.1| cysteine protease-like precursor [Glycine max]
 gi|149393486|gb|ABR26679.1| putative cysteine protease [Glycine max]
          Length = 355

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/334 (60%), Positives = 233/334 (69%), Gaps = 53/334 (15%)

Query: 29  DDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSK 88
           + +NPIR+V+       E  V++VIGQ R AL FARF  R+GK Y S EEM+ R+  FS+
Sbjct: 27  EAANPIRMVAG-----VEAEVVRVIGQCRRALKFARFMSRFGKSYRSEEEMRERYEIFSQ 81

Query: 89  NLDLIRSTNCKGLSYRLGLN---------------------------------------- 108
           NL  IRS N   L Y L +N                                        
Sbjct: 82  NLRFIRSHNKNRLPYTLSVNHFADWTWEEFKRHRLGAAQNCSATLNGNHKLTDAVLPPTK 141

Query: 109 -------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGC 161
                  +S VKDQG CGSCWTFSTTG+LEAA  QAFGK ISLSEQQLVDCA  FNN GC
Sbjct: 142 DWRKEGIVSDVKDQGSCGSCWTFSTTGALEAACAQAFGKSISLSEQQLVDCAGRFNNFGC 201

Query: 162 NGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQH 221
           NGGLPSQAFEYIKYNGGL+TEEAYPYTGKDGVCKFS+ENV VQV+DSVNITLGAE+EL+H
Sbjct: 202 NGGLPSQAFEYIKYNGGLETEEAYPYTGKDGVCKFSAENVAVQVIDSVNITLGAENELKH 261

Query: 222 AVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKN 281
           AV  VRPVSVAF+VV+GF FY++GVY+S  CG+T  DVNHAV+AVGYGVE+GVPYWLIK 
Sbjct: 262 AVAFVRPVSVAFQVVNGFHFYENGVYTSDICGSTSQDVNHAVLAVGYGVENGVPYWLIKK 321

Query: 282 SWGENWG-DHGYFKMEMGKNMCGIATCASYPVVA 314
             GE  G ++G  K+E+GKNMCG+ATCASYPVVA
Sbjct: 322 FMGEKVGVENGLLKLELGKNMCGVATCASYPVVA 355


>gi|359484377|ref|XP_003633102.1| PREDICTED: thiol protease aleurain-like isoform 2 [Vitis vinifera]
          Length = 318

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/364 (57%), Positives = 238/364 (65%), Gaps = 96/364 (26%)

Query: 1   MARPVQLVSSVILLLCCAAAASAS---ASSFDDSNPIRLVSSDGLRDFETSVLQVIGQAR 57
           MAR + +V++V++LLC  A+  A     SSFD+ NPIRLVS D +RD E+SVL++IG  R
Sbjct: 1   MAR-LSVVAAVLILLCAVASGEADHHFRSSFDEENPIRLVS-DSIRDLESSVLRLIGDTR 58

Query: 58  HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------- 108
           HA SFA FA RYGK Y++V+E+KLRF  FS+NL LIRSTN KGL Y L +N         
Sbjct: 59  HAHSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFADWTWEE 118

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 +SP+KDQGHCGSCWTFSTTG+L
Sbjct: 119 FRRHRLGAAQNCSATLKGNHKLTDVILPETKDWREDGIVSPIKDQGHCGSCWTFSTTGAL 178

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           EAAY QAFGKGISLSEQQLVDCA AFNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG 
Sbjct: 179 EAAYAQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGL 238

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSST 250
           DG CKFSSEN+GVQVLDSVNITL    ++ HA                            
Sbjct: 239 DGTCKFSSENIGVQVLDSVNITL----DVNHA---------------------------- 266

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
                       V+AVGYGVEDGV YWLIKNSWGENWGD+GYFKME+GKNMCG+ATC+SY
Sbjct: 267 ------------VLAVGYGVEDGVAYWLIKNSWGENWGDNGYFKMELGKNMCGVATCSSY 314

Query: 311 PVVA 314
           PVVA
Sbjct: 315 PVVA 318


>gi|385298943|gb|AFI60244.1| cysteine protease/senescence-enhanced 1, partial [Panicum virgatum]
          Length = 282

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/281 (66%), Positives = 213/281 (75%), Gaps = 48/281 (17%)

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLN--------------------------------- 108
           RF  FS++L+L+RSTN KGL YRLG+N                                 
Sbjct: 2   RFRIFSESLELVRSTNXKGLPYRLGINRFADMSWEXFRSTRLGAAQNCSATLAGNHRMRA 61

Query: 109 ---------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 153
                          +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK +SLSEQQLVDCA
Sbjct: 62  AAALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPVSLSEQQLVDCA 121

Query: 154 QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITL 213
            A+NN GCNGGLPSQAFEYIK+NGGLDTEE+YPY G +G+C+F + NVGV+VLDSVNITL
Sbjct: 122 GAYNNFGCNGGLPSQAFEYIKHNGGLDTEESYPYKGVNGLCQFKASNVGVKVLDSVNITL 181

Query: 214 GAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 273
           GAE+EL+ AVGLVRPVSVAFEV++GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVE+G
Sbjct: 182 GAENELKDAVGLVRPVSVAFEVINGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVENG 241

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VPYWLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 242 VPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 282


>gi|414589597|tpg|DAA40168.1| TPA: hypothetical protein ZEAMMB73_868349 [Zea mays]
          Length = 252

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/206 (83%), Positives = 188/206 (91%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QGHCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDC  AFNN GC GGLPSQ
Sbjct: 47  VSPVKNQGHCGSCWTFSTTGALEAAYTQATGKAISLSEQQLVDCGFAFNNFGCKGGLPSQ 106

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIKYNGGLDTEE+YPY G +G+C+F +ENVGV+VLDSVNITLGAEDEL+ AVGLVRP
Sbjct: 107 AFEYIKYNGGLDTEESYPYQGVNGICQFKAENVGVKVLDSVNITLGAEDELKDAVGLVRP 166

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VSVAFEV+ GFR YK+GVY+S  CG TPMDVNHAV+AVGYGVE+GVPYWLIKNSWG +WG
Sbjct: 167 VSVAFEVISGFRLYKTGVYTSDHCGTTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWG 226

Query: 289 DHGYFKMEMGKNMCGIATCASYPVVA 314
           D GYFKMEMGKNMCG+ATCASYPVVA
Sbjct: 227 DEGYFKMEMGKNMCGVATCASYPVVA 252


>gi|302790930|ref|XP_002977232.1| hypothetical protein SELMODRAFT_228454 [Selaginella moellendorffii]
 gi|300155208|gb|EFJ21841.1| hypothetical protein SELMODRAFT_228454 [Selaginella moellendorffii]
          Length = 353

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 177/337 (52%), Positives = 219/337 (64%), Gaps = 49/337 (14%)

Query: 23  ASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLR 82
           ++A   DDS+ I +V  DG+        +++G+      F  FA R+ ++Y S+ E++ R
Sbjct: 15  STARFLDDSSAISMVI-DGIS--PARFTELLGEGHKVARFHEFATRHKRVYGSLVELRER 71

Query: 83  FATFSKNLDLIRSTNCKGLSYRLGLN---------------------------------- 108
           F TFS+NL+LI  TN K L Y L +N                                  
Sbjct: 72  FVTFSRNLELIEETNRKELPYTLAVNQFADMSWEEFKKHNLFSSQNCSATTTNSVRAFLT 131

Query: 109 ------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
                       +SPVK+Q HCGSCWTFSTTG+LE+A+ QA GK + LSEQQLVDCA  +
Sbjct: 132 PPSKKDWRDDKIVSPVKNQQHCGSCWTFSTTGALESAHAQATGKMVVLSEQQLVDCAGGY 191

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
           NN GCNGGLPSQAFEYI+YNGGLDTE++YPYTG DG C ++  ++G +V D VNIT GAE
Sbjct: 192 NNFGCNGGLPSQAFEYIRYNGGLDTEDSYPYTGHDGKCTYNQNSIGAKVYDVVNITEGAE 251

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           DEL HAV   RPVS+A+EV+  FRFYKSGVY+S  CG  P  VNHAV+AVGY  +  VPY
Sbjct: 252 DELIHAVAFNRPVSIAYEVLKDFRFYKSGVYTSNVCGTGPDTVNHAVLAVGYNRDAPVPY 311

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           W+IKNSWGE++G  GYF MEMGKNMCGIATCASYPVV
Sbjct: 312 WIIKNSWGESFGLDGYFYMEMGKNMCGIATCASYPVV 348


>gi|302763927|ref|XP_002965385.1| hypothetical protein SELMODRAFT_439207 [Selaginella moellendorffii]
 gi|300167618|gb|EFJ34223.1| hypothetical protein SELMODRAFT_439207 [Selaginella moellendorffii]
          Length = 353

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 175/337 (51%), Positives = 218/337 (64%), Gaps = 49/337 (14%)

Query: 23  ASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLR 82
           ++A   DDS+ I +V  DG+        +++G+      F  FA R+ ++Y S+ E++ R
Sbjct: 15  STARFLDDSSAISMVI-DGIS--PARFTELLGEGHKVARFHEFATRHKRVYGSLVELRER 71

Query: 83  FATFSKNLDLIRSTNCKGLSYRLGLN---------------------------------- 108
           F TFS+NL+LI  TN K L Y L +N                                  
Sbjct: 72  FVTFSRNLELIEETNRKELPYTLAVNQFADMSWEEFKKHNLFSSQNCSATATNSVRAFLT 131

Query: 109 ------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
                       +SPVK+Q HCGSCWTFSTTG+LE+A+ QA GK + LSEQQLVDCA  +
Sbjct: 132 PPSKKDWRDDKIVSPVKNQQHCGSCWTFSTTGALESAHAQATGKMVVLSEQQLVDCAGGY 191

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
           NN GC+GGLPSQAFEYI+YNGGLDTE++YPYT  DG C ++  ++G +V D VNIT GAE
Sbjct: 192 NNFGCSGGLPSQAFEYIRYNGGLDTEDSYPYTAHDGKCMYNQNSIGAKVYDVVNITEGAE 251

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           DEL HAV   RPVS+A+EV+  FRFYKSGVY+S  CG  P  VNHAV+AVGY  +  VPY
Sbjct: 252 DELIHAVAFNRPVSIAYEVLKDFRFYKSGVYTSNVCGTGPDTVNHAVLAVGYNRDAPVPY 311

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           W+IKNSWGE++G  GYF MEMGKNMCGIATCASYPVV
Sbjct: 312 WIIKNSWGESFGLDGYFYMEMGKNMCGIATCASYPVV 348


>gi|356569685|ref|XP_003553027.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 3-like [Glycine
           max]
          Length = 428

 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 180/312 (57%), Positives = 208/312 (66%), Gaps = 62/312 (19%)

Query: 16  CCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYES 75
           C    ++   S+FDD+NPIRL S     D E+ VL VIG +RHALSFARFA R+ K Y S
Sbjct: 13  CGRKPSTCCCSTFDDANPIRLAS-----DLESQVLDVIGXSRHALSFARFACRHDKRYHS 67

Query: 76  VEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------------------------- 108
           V E++  F  FS NL LIRSTN + L+Y LG+N                           
Sbjct: 68  VGEIRNDFQIFSDNLKLIRSTNRRSLTYTLGVNHFADWTWEEFTRHKLDAPQNCSATLKG 127

Query: 109 --------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
                               +S VKDQG+CGSCWTFSTTG+LEAAY QAFGK ISLSEQQ
Sbjct: 128 NHRLTDVVLPDEKDWRKEGIVSQVKDQGNCGSCWTFSTTGALEAAYTQAFGKNISLSEQQ 187

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           LVDCA AFNN GCNGGLPS+          LDTEEAYPYTGKDGVCKF+++N+ VQV+DS
Sbjct: 188 LVDCAGAFNNFGCNGGLPSR----------LDTEEAYPYTGKDGVCKFTAKNIAVQVIDS 237

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           +NITLGAEDEL+  V  V PVSVAFEVV  FRFY +GVY+ST CG+TPMDVNH V+AVGY
Sbjct: 238 INITLGAEDELKQVVAFVWPVSVAFEVVKDFRFYNNGVYTSTICGSTPMDVNHVVLAVGY 297

Query: 269 GVEDGVPYWLIK 280
           GVEDGVPYW+IK
Sbjct: 298 GVEDGVPYWIIK 309


>gi|168047065|ref|XP_001775992.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672650|gb|EDQ59184.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 165/311 (53%), Positives = 201/311 (64%), Gaps = 48/311 (15%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           +++G +R  L FA FA +Y K Y++VEE+K RF TF +++ L+ + N    SY L +N  
Sbjct: 18  EILGHSRDVLHFAGFAAKYKKEYKTVEELKHRFVTFLESVKLVETHNKGQHSYSLAVNEF 77

Query: 109 ---------------------------------------------ISPVKDQGHCGSCWT 123
                                                        +S VK+Q  CGSCWT
Sbjct: 78  ADMTFEEFRDSRLMKGEQNCSATVGNHVLTGESLPKTKDWREEGIVSQVKNQASCGSCWT 137

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FSTTG+LEAA+ QA GK + LSEQQLVDCA  FNN GC GGLPSQAFEYI+YNGG+DTE+
Sbjct: 138 FSTTGALEAAHAQATGKMVLLSEQQLVDCAGEFNNFGCGGGLPSQAFEYIRYNGGIDTED 197

Query: 184 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYK 243
           +YPY  KD  C+F    +G QV D VNIT GAE +L+HA+  +RPVSVAFEVV  FR Y 
Sbjct: 198 SYPYNAKDSQCRFHKNTIGAQVWDVVNITEGAETQLKHAIATMRPVSVAFEVVHDFRLYN 257

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMC 302
            GVY+S  C   P  VNHAV+AVGYG  E+GVPYW+IKNSWG +WG +GYF MEMGKNMC
Sbjct: 258 GGVYTSLNCHTGPQTVNHAVLAVGYGEDENGVPYWIIKNSWGADWGMNGYFNMEMGKNMC 317

Query: 303 GIATCASYPVV 313
           G+ATCASYPVV
Sbjct: 318 GVATCASYPVV 328


>gi|37655265|gb|AAQ96835.1| cysteine proteinase [Glycine max]
          Length = 215

 Score =  326 bits (836), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 152/184 (82%), Positives = 170/184 (92%)

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSCW FSTTG+LEAAY QAFGK ISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNG
Sbjct: 1   CGSCWAFSTTGALEAAYAQAFGKSISLSEQQLVDCAGPFNNFGCHGGLPSQAFEYIKYNG 60

Query: 178 GLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           GL+TEEAYPYTGKDGVCKFS+ENV VQVLDSVNITLGAEDEL+HAV  VRPVSVAF+VV+
Sbjct: 61  GLETEEAYPYTGKDGVCKFSAENVAVQVLDSVNITLGAEDELKHAVAFVRPVSVAFQVVN 120

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM 297
           GF FY++GV++S  CG+T  DVNHAV+AVGYGVE+GVPYWLIKNSWGE+WG++GYFKME+
Sbjct: 121 GFHFYENGVFTSDTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGESWGENGYFKMEL 180

Query: 298 GKNM 301
           GKNM
Sbjct: 181 GKNM 184


>gi|6635844|gb|AAF20005.1|AF213939_1 cysteine protease [Prunus dulcis]
          Length = 178

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 147/178 (82%), Positives = 159/178 (89%)

Query: 114 DQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 173
           DQGHCGSCWTFSTTG+LEAAY QAFGK ISLSEQQLVDCA AFNN GC+GGLPSQAFEYI
Sbjct: 1   DQGHCGSCWTFSTTGALEAAYVQAFGKQISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYI 60

Query: 174 KYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233
           KYNGGLDTE AYPY G DG CKFS+ENVG QVLDSVNITLG E EL+HAV  VRPVSVAF
Sbjct: 61  KYNGGLDTEAAYPYVGTDGACKFSAENVGAQVLDSVNITLGDEQELKHAVAFVRPVSVAF 120

Query: 234 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHG 291
           +VV  FRFYKSGVY+S  CG++PMDVNHAV+AVGYG E GVP+WLIKNSWGE+WGD+G
Sbjct: 121 QVVKSFRFYKSGVYTSDTCGSSPMDVNHAVLAVGYGEEGGVPFWLIKNSWGESWGDNG 178


>gi|356570072|ref|XP_003553215.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 3-like, partial
           [Glycine max]
          Length = 301

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/274 (56%), Positives = 182/274 (66%), Gaps = 52/274 (18%)

Query: 26  SSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFAT 85
           S+FDD NPIRL S     D E+ VL VI Q+RHALSFA FA  + K Y S++E++  F  
Sbjct: 2   STFDDVNPIRLAS-----DLESQVLDVIMQSRHALSFACFACHHDKRYHSIDEIRNGFQI 56

Query: 86  FSKNLDLIRSTNCKGLSYRLGLN------------------------------------- 108
           FS NL LIRSTN + L+Y LG+N                                     
Sbjct: 57  FSDNLKLIRSTNRRSLTYMLGVNHFADWTWEEFTRHKLGAPQNCSATLKGNHRLTDVVLP 116

Query: 109 ----------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
                     +S VKDQG+C S WTFSTTG+LEAAY QAFGK ISLSEQQLVDC  AFNN
Sbjct: 117 DEKDWRKEGIVSQVKDQGNCRSSWTFSTTGALEAAYAQAFGKNISLSEQQLVDCVGAFNN 176

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCN GLPS+AFEYIKYNGGLDTEEAYPYTGKDGV KF+++NV +QV+DS+NITLGAEDE
Sbjct: 177 FGCNDGLPSKAFEYIKYNGGLDTEEAYPYTGKDGVYKFAAKNVAIQVIDSINITLGAEDE 236

Query: 219 LQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKC 252
           L+ AV  VRPVSVAFEV   F+FY +GVY++T C
Sbjct: 237 LKQAVAFVRPVSVAFEVSKDFQFYNNGVYTNTIC 270


>gi|354466410|ref|XP_003495667.1| PREDICTED: pro-cathepsin H-like [Cricetulus griseus]
          Length = 333

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 180/313 (57%), Gaps = 49/313 (15%)

Query: 48  SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGL 107
           +  ++   A     F  +  ++ K Y SVE    R  TF+ N   I + N +  ++++GL
Sbjct: 19  ATTELTVNAIEKFHFKSWMTQHQKTYSSVE-YNYRLKTFANNWRKIHAHNQRNHTFKMGL 77

Query: 108 N------------------------------------------------ISPVKDQGHCG 119
           N                                                +S VK+QG CG
Sbjct: 78  NQFSDMTFAEIKRKYLWSEPQNCSATKGNYLRGTGPLPPSMDWRKKGNFVSAVKNQGSCG 137

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+
Sbjct: 138 SCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQNFNNHGCEGGLPSQAFEYILYNKGI 197

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF 239
             E+ YPY GKDG CKF  +     V D  NITL  E  +  AV L  PVS AFEV D F
Sbjct: 198 MGEDTYPYRGKDGHCKFDPQKAIAFVKDVANITLNDEKAMVEAVALYNPVSFAFEVTDDF 257

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK 299
             Y+ G+YSST C  TP  VNHAV+AVGYG +DG+PYW++KNSWG NWGD GYF +E GK
Sbjct: 258 MLYQKGIYSSTSCHKTPDKVNHAVLAVGYGEKDGIPYWIVKNSWGTNWGDKGYFLIERGK 317

Query: 300 NMCGIATCASYPV 312
           NMCG+A CASYP+
Sbjct: 318 NMCGLAACASYPI 330


>gi|348671668|gb|EGZ11488.1| papain-like cysteine protease C1 [Phytophthora sojae]
          Length = 396

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 135/212 (63%), Positives = 160/212 (75%)

Query: 103 YRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCN 162
           +R    +SPVK+QG CGSCWTFSTTG LE+      G+   LSEQ L+DCAQAF+N GCN
Sbjct: 185 WRADGAVSPVKNQGKCGSCWTFSTTGCLESHLKLKHGQFKILSEQNLLDCAQAFDNHGCN 244

Query: 163 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHA 222
           GGLPS AFEY+KYNGGLDTEE YPY  K+G CKF++ +VG QV   VNIT   E EL+ A
Sbjct: 245 GGLPSHAFEYVKYNGGLDTEETYPYEAKEGKCKFNTYHVGAQVEQVVNITSRNEKELKAA 304

Query: 223 VGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
           VG   PVS+AF+VV  FRFYKSGVY ST+C +   DVNHAV+AVGYGVEDG  +W++KNS
Sbjct: 305 VGSTGPVSIAFQVVSDFRFYKSGVYESTECHSGEKDVNHAVLAVGYGVEDGKKHWIVKNS 364

Query: 283 WGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           WG  WG  G+F++  G NMCG+A CASYPVVA
Sbjct: 365 WGAEWGMDGFFQIARGSNMCGLADCASYPVVA 396


>gi|344238391|gb|EGV94494.1| Ras-specific guanine nucleotide-releasing factor 1 [Cricetulus
            griseus]
          Length = 1632

 Score =  283 bits (724), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 128/198 (64%), Positives = 146/198 (73%)

Query: 115  QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 174
            QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI 
Sbjct: 1432 QGSCGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQNFNNHGCEGGLPSQAFEYIL 1491

Query: 175  YNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 234
            YN G+  E+ YPY GKDG CKF  +     V D  NITL  E  +  AV L  PVS AFE
Sbjct: 1492 YNKGIMGEDTYPYRGKDGHCKFDPQKAIAFVKDVANITLNDEKAMVEAVALYNPVSFAFE 1551

Query: 235  VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK 294
            V D F  Y+ G+YSST C  TP  VNHAV+AVGYG +DG+PYW++KNSWG NWGD GYF 
Sbjct: 1552 VTDDFMLYQKGIYSSTSCHKTPDKVNHAVLAVGYGEKDGIPYWIVKNSWGTNWGDKGYFL 1611

Query: 295  MEMGKNMCGIATCASYPV 312
            +E GKNMCG+A CASYP+
Sbjct: 1612 IERGKNMCGLAACASYPI 1629


>gi|313224805|emb|CBY20597.1| unnamed protein product [Oikopleura dioica]
          Length = 343

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 143/303 (47%), Positives = 186/303 (61%), Gaps = 50/303 (16%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLN----------- 108
           +F ++   + K+YE+ EE ++R  TFSKN ++I S N +  +++ +GLN           
Sbjct: 41  AFRQYEVEFSKMYETAEERRIRAQTFSKNFEMITSHNQREDVTWTMGLNFDADLTFSEFQ 100

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               +SPVK+QGHCGSCWTFSTTG LE+
Sbjct: 101 SRYLMVSQDCSATSTRDLDIDILSLPENFDWREHGGVSPVKNQGHCGSCWTFSTTGCLES 160

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
           A+     K  +LSEQQLVDCAQ F+N GCNGGLPS AFEYI Y GGL+ E+ Y Y  ++G
Sbjct: 161 AHLIHHKKAYNLSEQQLVDCAQDFDNHGCNGGLPSHAFEYIHYVGGLEEEQDYSYHAEEG 220

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKC 252
           +C+F        V +  NIT   ED+L  A+    PVSVAFEVVDGFRFYK GVY S  C
Sbjct: 221 LCEFDPTKTAGTVREVFNITETDEDQLTIALAYFNPVSVAFEVVDGFRFYKEGVYQSDTC 280

Query: 253 GNTPMDVNHAVVAVGYGV--EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            + P DVNHAV+AVGYG+  +   PY+++KNSWG  WGD G+FK++ G+NMCGIATCAS+
Sbjct: 281 KSGPEDVNHAVLAVGYGMCKKCETPYFIVKNSWGAEWGDEGFFKIKRGENMCGIATCASF 340

Query: 311 PVV 313
           P+V
Sbjct: 341 PIV 343


>gi|301103045|ref|XP_002900609.1| cysteine protease family C01A, putative [Phytophthora infestans
           T30-4]
 gi|262101872|gb|EEY59924.1| cysteine protease family C01A, putative [Phytophthora infestans
           T30-4]
          Length = 376

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 159/211 (75%)

Query: 103 YRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCN 162
           +R    +SPVK+QG CGSCWTFSTTG LE+      G+   LSEQ L+DCAQ F+N GCN
Sbjct: 165 WRADGAVSPVKNQGKCGSCWTFSTTGCLESHVKLKHGEFTILSEQNLLDCAQNFDNHGCN 224

Query: 163 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHA 222
           GGLPS AFEYIKYNGGLDTEE YPY  K+G CKF++ +VGVQV   VNIT   E+EL+ A
Sbjct: 225 GGLPSHAFEYIKYNGGLDTEETYPYEAKEGKCKFNTYHVGVQVDQVVNITTRNENELRAA 284

Query: 223 VGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
           VG   PVS+AF+VV  FRFY+SGVY S +C +   DVNHAV+AVGYGVEDG  +W++KNS
Sbjct: 285 VGSTGPVSIAFQVVSDFRFYESGVYESKECRSDEKDVNHAVLAVGYGVEDGKDHWIVKNS 344

Query: 283 WGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           WG  WG  G+F++  G NMCG+A CASYPVV
Sbjct: 345 WGSQWGMDGFFQIARGSNMCGVAVCASYPVV 375


>gi|53748483|emb|CAH59426.1| cysteine protease 1 [Plantago major]
          Length = 149

 Score =  279 bits (714), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 140/149 (93%)

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
           PSQAFEYIKYNGGL+TE AYPYTGKDGVCKFSSENVGV+V DSVNITLGAEDEL+HAV  
Sbjct: 1   PSQAFEYIKYNGGLETESAYPYTGKDGVCKFSSENVGVRVFDSVNITLGAEDELKHAVAF 60

Query: 226 VRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
            RPVSVAFEVV GFR YKSGVY+ST CGN+PMDVNHAV+AVGYGVE+G+PYWL+KNSWG 
Sbjct: 61  ARPVSVAFEVVTGFRAYKSGVYTSTTCGNSPMDVNHAVLAVGYGVENGIPYWLVKNSWGA 120

Query: 286 NWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           +WGD+GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 121 DWGDNGYFKMEMGKNMCGVATCASYPIVA 149


>gi|410960470|ref|XP_003986812.1| PREDICTED: pro-cathepsin H [Felis catus]
          Length = 321

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 177/307 (57%), Gaps = 49/307 (15%)

Query: 54  GQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----- 108
           GQ    + F  +  ++ K Y S EE + R  TF  N   I + N    ++++GLN     
Sbjct: 13  GQHHEKVHFKSWMVQHQKRYSS-EEYQRRLQTFVGNWRRISAHNAGNHTFKMGLNQFSDM 71

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      +SPVK+QG CGSCWTFS
Sbjct: 72  SFAEIKHKYLWSEPQNCSATRGNYLRGTGPYPPFVDWRTKGKYVSPVKNQGGCGSCWTFS 131

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
           TTG+LE+A     GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ Y
Sbjct: 132 TTGALESAIAIKTGKLLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTY 191

Query: 186 PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSG 245
           PY G+DG CKF        V D  NIT+  E+ +  AV L  PVS AFEV D F  Y+ G
Sbjct: 192 PYKGQDGDCKFQPSKAIAFVKDVANITINDEEAMVEAVALYNPVSFAFEVTDDFMMYRKG 251

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIA 305
           VYSST C  TP  VNHAV+AVGYG +DG+PYW++KNSWG  WG  GYF +E GKNMCG+A
Sbjct: 252 VYSSTSCHKTPDKVNHAVLAVGYGEKDGIPYWIVKNSWGPQWGMKGYFLIERGKNMCGLA 311

Query: 306 TCASYPV 312
            CASYP+
Sbjct: 312 ACASYPI 318


>gi|348551380|ref|XP_003461508.1| PREDICTED: pro-cathepsin H-like [Cavia porcellus]
          Length = 335

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 130/204 (63%), Positives = 154/204 (75%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 129 VSPVKNQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCEGGLPSQ 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG C+F  +     V D VNITL  E+ +  AV L  P
Sbjct: 189 AFEYILYNKGIMGEDTYPYQGKDGHCRFQPQKAIAFVKDVVNITLNDEEAMVEAVALYNP 248

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV + F  Y+SG+YSST C  TP  VNHAV+AVGYGV++GVPYW++KNSWG  WG
Sbjct: 249 VSFAFEVTEDFISYQSGIYSSTSCHKTPDKVNHAVLAVGYGVQNGVPYWIVKNSWGTAWG 308

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
             GYF +E GKNMCG+A CAS+P+
Sbjct: 309 QDGYFLIERGKNMCGLAACASFPI 332


>gi|148688953|gb|EDL20900.1| cathepsin H, isoform CRA_a [Mus musculus]
          Length = 291

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 139/269 (51%), Positives = 176/269 (65%), Gaps = 14/269 (5%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------I 109
           A     F  + +++ K Y SVE    R   F+ N   I++ N +  ++++ LN       
Sbjct: 24  AIEKFHFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSF 82

Query: 110 SPVKD-------QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCN 162
           + +K        QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQAFNN GC 
Sbjct: 83  AEIKHKFLWSEPQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCK 142

Query: 163 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHA 222
           GGLPSQAFEYI YN G+  E++YPY GKD  C+F+ +     V + VNITL  E  +  A
Sbjct: 143 GGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEA 202

Query: 223 VGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
           V L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNS
Sbjct: 203 VALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNS 262

Query: 283 WGENWGDHGYFKMEMGKNMCGIATCASYP 311
           WG  WG++GYF +E GKNMCG+A CASYP
Sbjct: 263 WGSQWGENGYFLIERGKNMCGLAACASYP 291


>gi|6978721|ref|NP_037071.1| pro-cathepsin H precursor [Rattus norvegicus]
 gi|115729|sp|P00786.1|CATH_RAT RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|55886|emb|CAA68699.1| cathepsin H pre-pro-peptide [Rattus norvegicus]
 gi|55391460|gb|AAH85352.1| Cathepsin H [Rattus norvegicus]
 gi|149018921|gb|EDL77562.1| cathepsin H, isoform CRA_a [Rattus norvegicus]
 gi|226475|prf||1514114A cathepsin H
          Length = 333

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 143/305 (46%), Positives = 181/305 (59%), Gaps = 49/305 (16%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------- 108
           A     F  + +++ K Y S  E   R   F+ N   I++ N +  ++++GLN       
Sbjct: 27  AIEKFHFTSWMKQHQKTYSS-REYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSF 85

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    +SPVK+QG CGSCWTFSTT
Sbjct: 86  AEIKHKYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTT 145

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE+A   A GK ++L+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E++YPY
Sbjct: 146 GALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPY 205

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVY 247
            GK+G CKF+ E     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVY
Sbjct: 206 IGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVY 265

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATC 307
           SS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG NWG++GYF +E GKNMCG+A C
Sbjct: 266 SSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAAC 325

Query: 308 ASYPV 312
           ASYP+
Sbjct: 326 ASYPI 330


>gi|338717354|ref|XP_001492337.3| PREDICTED: pro-cathepsin H-like [Equus caballus]
          Length = 323

 Score =  276 bits (707), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 145/308 (47%), Positives = 178/308 (57%), Gaps = 49/308 (15%)

Query: 53  IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---- 108
           + +A     F  +  ++ K Y S EE   R  TF  N   I + N    ++R+GLN    
Sbjct: 14  LSRACEKFHFKSWMVQHQKKYSS-EEYHHRLQTFVSNWRKINAHNTGNHTFRMGLNQFSA 72

Query: 109 --------------------------------------------ISPVKDQGHCGSCWTF 124
                                                       +SPVK+QG CGSCWTF
Sbjct: 73  MNFAELKHKYLWSEPQNCSATKGNYLRGAGPYPPSVDWRKKGNFVSPVKNQGGCGSCWTF 132

Query: 125 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184
           STTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ 
Sbjct: 133 STTGALESAVAIASGKLLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDT 192

Query: 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKS 244
           YPY G+DG CKF        V D  NITL  E  +  AV L  PVS AFEV + F  Y+ 
Sbjct: 193 YPYKGQDGDCKFQPNKAIAFVKDVANITLNDEKAMVEAVALYNPVSFAFEVTEDFMMYRK 252

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 304
           G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG +WG +GYF +E GKNMCG+
Sbjct: 253 GIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPHWGMNGYFLIERGKNMCGL 312

Query: 305 ATCASYPV 312
           A CASYP+
Sbjct: 313 AACASYPI 320


>gi|118388791|ref|XP_001027491.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89309261|gb|EAS07249.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 356

 Score =  276 bits (707), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 136/230 (59%), Positives = 170/230 (73%), Gaps = 11/230 (4%)

Query: 88  KNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI---SL 144
           KN+ +  S N K L+      +SPVKDQ +CGSCWTFSTTG++E+  H A  + +   SL
Sbjct: 123 KNVQVPESINWKDLN-----KVSPVKDQQNCGSCWTFSTTGAIES--HYAIFEDVEPTSL 175

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQ 204
           SEQQL+DCA AFNN GC+GGLPSQAFEYIKYNGG+  E +Y Y  +D  C+FS E VG +
Sbjct: 176 SEQQLIDCAGAFNNNGCSGGLPSQAFEYIKYNGGISYENSYYYIAQDQECQFSPETVGAR 235

Query: 205 VLD-SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAV 263
           V   S NIT G ED+L+ AVG V PVS+AF+V+  F+ YKSGVYS+  C ++P  VNHAV
Sbjct: 236 VRGGSFNITQGDEDQLKQAVGTVGPVSIAFQVMGDFKLYKSGVYSNPDCSSSPQTVNHAV 295

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           +AVGYG E+GV YW +KNSW E WGD GYFK++ G NMCG+ATCASYP++
Sbjct: 296 LAVGYGSENGVDYWYVKNSWSEFWGDEGYFKIQRGVNMCGVATCASYPLL 345


>gi|166235890|ref|NP_031827.2| pro-cathepsin H preproprotein [Mus musculus]
 gi|341940309|sp|P49935.2|CATH_MOUSE RecName: Full=Pro-cathepsin H; AltName: Full=Cathepsin B3; AltName:
           Full=Cathepsin BA; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74151776|dbj|BAE29677.1| unnamed protein product [Mus musculus]
 gi|74181999|dbj|BAE34071.1| unnamed protein product [Mus musculus]
 gi|74211659|dbj|BAE29188.1| unnamed protein product [Mus musculus]
 gi|74213518|dbj|BAE35569.1| unnamed protein product [Mus musculus]
 gi|148688954|gb|EDL20901.1| cathepsin H, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/305 (46%), Positives = 180/305 (59%), Gaps = 49/305 (16%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------- 108
           A     F  + +++ K Y SVE    R   F+ N   I++ N +  ++++ LN       
Sbjct: 27  AIEKFHFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSF 85

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    +SPVK+QG CGSCWTFSTT
Sbjct: 86  AEIKHKFLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTT 145

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE+A   A GK +SL+EQQLVDCAQAFNN GC GGLPSQAFEYI YN G+  E++YPY
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPY 205

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVY 247
            GKD  C+F+ +     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVY
Sbjct: 206 IGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVY 265

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATC 307
           SS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A C
Sbjct: 266 SSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAAC 325

Query: 308 ASYPV 312
           ASYP+
Sbjct: 326 ASYPI 330


>gi|351700981|gb|EHB03900.1| Cathepsin H [Heterocephalus glaber]
          Length = 334

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 129/204 (63%), Positives = 153/204 (75%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +S VK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 128 VSAVKNQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQ 187

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG C+F  +     V D VNITL  E+ +  AV L  P
Sbjct: 188 AFEYILYNKGIMGEDTYPYEGKDGHCRFQPQKAIAFVKDIVNITLNDEEAMVEAVALYNP 247

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS A+EV + F  YK G+YSST C  TP  VNHAV+AVGYGV+ GVPYW++KNSWG  WG
Sbjct: 248 VSFAYEVTEDFMSYKRGIYSSTSCHKTPDKVNHAVLAVGYGVDHGVPYWIVKNSWGTQWG 307

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
           ++GYF +E GKNMCG+A CASYP+
Sbjct: 308 NNGYFLIERGKNMCGLAACASYPI 331


>gi|355692920|gb|EHH27523.1| Cathepsin H, partial [Macaca mulatta]
          Length = 305

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/301 (47%), Positives = 175/301 (58%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 3   FHFKSWMSKHHKTY-STEEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 61

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 62  HKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 121

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 122 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 181

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+ AE+ +  AV L  PVS AFEV   F  YK+G+YSST 
Sbjct: 182 GDCKFRPGKAIGFVKDVANITIYAEEAMVEAVALYNPVSFAFEVTQDFMMYKTGIYSSTS 241

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 242 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 301

Query: 312 V 312
           +
Sbjct: 302 I 302


>gi|47522632|ref|NP_999094.1| pro-cathepsin H precursor [Sus scrofa]
 gi|5915886|sp|O46427.1|CATH_PIG RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|2735659|gb|AAB93957.1| preprocathepsin H [Sus scrofa]
 gi|172050733|gb|ACB70168.1| cathepsin H [Sus scrofa]
          Length = 335

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 176/301 (58%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L F  +  ++ K Y S+EE   R   F  N   I + N    +++LGLN           
Sbjct: 33  LHFKSWMVQHQKKY-SLEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIR 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ YPY G+D
Sbjct: 152 SAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
             CKF  +     V D  NIT+  E+ +  AV L  PVS AFEV + F  Y+ G+YSST 
Sbjct: 212 DHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|203341|gb|AAA63484.1| cathepsin H [Rattus norvegicus]
          Length = 298

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/204 (63%), Positives = 155/204 (75%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK ++L+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 92  VSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQ 151

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E++YPY GK+G CKF+ E     V + VNITL  E  +  AV L  P
Sbjct: 152 AFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNP 211

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG NWG
Sbjct: 212 VSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWG 271

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
           ++GYF +E GKNMCG+A CASYP+
Sbjct: 272 NNGYFLIERGKNMCGLAACASYPI 295


>gi|417399160|gb|JAA46608.1| Putative pro-cathepsin h [Desmodus rotundus]
          Length = 336

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 140/301 (46%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE + R  TF+ N   I+  N +  ++++G+N           
Sbjct: 34  FHFKSWMEQHQKTY-SAEEYRHRLQTFASNQRKIKEHNARNHTFKMGINPFSDMTFAEFK 92

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 93  RRYLWSEPQNCSATKSNYLRGHGPYPTSVDWRKKGRFVSPVKNQGGCGSCWTFSTTGALE 152

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A     GK +SLSEQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E++YPY GKD
Sbjct: 153 SAIAIKTGKMLSLSEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMEEDSYPYEGKD 212

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
             C+F  E     V D  NITL  E  +  AV L  PVS AFEV   F  Y+ G+YSST 
Sbjct: 213 SNCRFQPEKAIAFVKDVANITLNDEAAMVEAVALYNPVSFAFEVTSDFMLYRKGIYSSTS 272

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG ++G PYW++KNSWG  WG +GYF +E G NMCG+A CASYP
Sbjct: 273 CHKTPDKVNHAVLAVGYGEQNGKPYWIVKNSWGPYWGMNGYFLIERGTNMCGLAACASYP 332

Query: 312 V 312
           +
Sbjct: 333 I 333


>gi|454101|gb|AAA82966.1| cathepsin H prepropeptide [Mus musculus]
          Length = 333

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 141/305 (46%), Positives = 179/305 (58%), Gaps = 49/305 (16%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------- 108
           A     F  + +++ K Y SVE    R   F+ N   I++ N +  ++++ LN       
Sbjct: 27  AIEKFHFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSF 85

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    +SPVK+QG C SCWTFSTT
Sbjct: 86  AEIKHKFLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTT 145

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE+A   A GK +SL+EQQLVDCAQAFNN GC GGLPSQAFEYI YN G+  E++YPY
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPY 205

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVY 247
            GKD  C+F+ +     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVY
Sbjct: 206 IGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVY 265

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATC 307
           SS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A C
Sbjct: 266 SSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAAC 325

Query: 308 ASYPV 312
           ASYP+
Sbjct: 326 ASYPI 330


>gi|198435380|ref|XP_002128293.1| PREDICTED: similar to cathepsin H [Ciona intestinalis]
          Length = 438

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/303 (49%), Positives = 180/303 (59%), Gaps = 51/303 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLN------------ 108
           F  +   +GK Y + EE + RF  FSK+L  I+  N +   ++ +GLN            
Sbjct: 135 FKGWQIEHGKQYINQEEAEKRFQIFSKSLKTIKEFNNRVDRTWEMGLNEFSDRTFEEFAS 194

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++ VK+QG CGSCWTFSTTG LE+A
Sbjct: 195 IRLMMPQNCSATKGNHVSLGFEPPAQINCLEKGNFVTAVKNQGSCGSCWTFSTTGCLESA 254

Query: 134 --YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
              H+     +SLSEQQLVDCAQAFN+ GCNGGLPSQAFEYI YN GL TE  YPY G D
Sbjct: 255 TAIHKEGNPLVSLSEQQLVDCAQAFNDHGCNGGLPSQAFEYIHYNKGLMTEADYPYQGVD 314

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G C F +      V   VNIT G ED ++ AVGL+ PVS+AF+V   FR YKSGVYSST 
Sbjct: 315 GKCHFVASKASAFVKQIVNITKGNEDGIKEAVGLLNPVSIAFDVAKDFRHYKSGVYSSTL 374

Query: 252 CGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           CGN   +VNHAV+AVGYG   +G  YWL+KNSWG  WG +GYFK+E G NMCG+A CASY
Sbjct: 375 CGNKASEVNHAVLAVGYGYTSNGQDYWLVKNSWGPQWGINGYFKIERGSNMCGLADCASY 434

Query: 311 PVV 313
           PV+
Sbjct: 435 PVI 437


>gi|301775254|ref|XP_002923050.1| PREDICTED: cathepsin H-like [Ailuropoda melanoleuca]
          Length = 307

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 129/209 (61%), Positives = 152/209 (72%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG+LE+A     GK +SL+EQQLVDCAQ FNN GC G
Sbjct: 96  KKGKFVSPVKNQGGCGSCWTFSTTGALESAIAIKTGKLLSLAEQQLVDCAQDFNNHGCQG 155

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI+YN G+  E++YPY G+DG CKF        V D  NIT+  E  +  AV
Sbjct: 156 GLPSQAFEYIRYNRGIMGEDSYPYKGQDGDCKFQPSKAIAFVKDVANITINDEQAMVEAV 215

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            L  PVS AFEV   F  Y+ GVYSST C  TP  VNHAV+AVGYG ++GVPYW++KNSW
Sbjct: 216 ALFNPVSFAFEVTGDFMMYRKGVYSSTSCHKTPDKVNHAVLAVGYGEQNGVPYWIVKNSW 275

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG HGYF +E GKNMCG+A CASYP+
Sbjct: 276 GPQWGMHGYFLIERGKNMCGLAACASYPI 304


>gi|281350252|gb|EFB25836.1| hypothetical protein PANDA_012122 [Ailuropoda melanoleuca]
          Length = 294

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 129/209 (61%), Positives = 152/209 (72%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG+LE+A     GK +SL+EQQLVDCAQ FNN GC G
Sbjct: 83  KKGKFVSPVKNQGGCGSCWTFSTTGALESAIAIKTGKLLSLAEQQLVDCAQDFNNHGCQG 142

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI+YN G+  E++YPY G+DG CKF        V D  NIT+  E  +  AV
Sbjct: 143 GLPSQAFEYIRYNRGIMGEDSYPYKGQDGDCKFQPSKAIAFVKDVANITINDEQAMVEAV 202

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            L  PVS AFEV   F  Y+ GVYSST C  TP  VNHAV+AVGYG ++GVPYW++KNSW
Sbjct: 203 ALFNPVSFAFEVTGDFMMYRKGVYSSTSCHKTPDKVNHAVLAVGYGEQNGVPYWIVKNSW 262

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG HGYF +E GKNMCG+A CASYP+
Sbjct: 263 GPQWGMHGYFLIERGKNMCGLAACASYPI 291


>gi|13905172|gb|AAH06878.1| Cathepsin H [Mus musculus]
          Length = 333

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 141/305 (46%), Positives = 179/305 (58%), Gaps = 49/305 (16%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------- 108
           A     F  + +++ K Y SVE    R   F+ N   I++ N +  ++++ LN       
Sbjct: 27  AIEKFHFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSF 85

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    +SPV +QG CGSCWTFSTT
Sbjct: 86  AEIKHKFLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVINQGACGSCWTFSTT 145

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE+A   A GK +SL+EQQLVDCAQAFNN GC GGLPSQAFEYI YN G+  E++YPY
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPY 205

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVY 247
            GKD  C+F+ +     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVY
Sbjct: 206 IGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVY 265

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATC 307
           SS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A C
Sbjct: 266 SSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAAC 325

Query: 308 ASYPV 312
           ASYP+
Sbjct: 326 ASYPI 330


>gi|296213765|ref|XP_002753411.1| PREDICTED: pro-cathepsin H [Callithrix jacchus]
          Length = 336

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 171/301 (56%), Gaps = 48/301 (15%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y   EE   R  TF+ N   I + N    ++++ +N           
Sbjct: 33  FHFKSWMAKHHKTYSREEEYHQRLQTFASNWRKINAHNNGNHTFKMAVNQFSDMSFAEIK 92

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 93  RKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGHFVSPVKNQGACGSCWTFSTTGALE 152

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 153 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNNGIMGEDTYPYQGKD 212

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
             CKF        V D  NIT+  ED +  AV L  PVS AFEV   F  YK G+YSST 
Sbjct: 213 SDCKFQPGKAIGFVKDVANITIYDEDAMVEAVALYNPVSFAFEVTQDFMMYKRGIYSSTS 272

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 273 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 332

Query: 312 V 312
           V
Sbjct: 333 V 333


>gi|4139678|pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1
           Angstrom Resolution: Location Of The Mini-Chain
           C-Terminal Carboxyl Group Defines Cathepsin H
           Aminopeptidase Function
 gi|28948781|pdb|1NB3|A Chain A, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948784|pdb|1NB3|B Chain B, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948787|pdb|1NB3|C Chain C, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948790|pdb|1NB3|D Chain D, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948793|pdb|1NB5|A Chain A, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948796|pdb|1NB5|B Chain B, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948799|pdb|1NB5|C Chain C, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948802|pdb|1NB5|D Chain D, Crystal Structure Of Stefin A In Complex With Cathepsin H
          Length = 220

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 126/204 (61%), Positives = 152/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 14  VSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQ 73

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI+YN G+  E+ YPY G+D  CKF  +     V D  NIT+  E+ +  AV L  P
Sbjct: 74  AFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNP 133

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG
Sbjct: 134 VSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWG 193

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 194 MNGYFLIERGKNMCGLAACASYPI 217


>gi|297297049|ref|XP_002804951.1| PREDICTED: cathepsin H [Macaca mulatta]
          Length = 323

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 143/301 (47%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 21  FHFKSWMSKHHKTY-STEEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 79

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 80  HKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 139

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 140 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 199

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  YK+G+YSST 
Sbjct: 200 GDCKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMIYKTGIYSSTS 259

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 260 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 319

Query: 312 V 312
           +
Sbjct: 320 I 320


>gi|172050735|gb|ACB70169.1| cathepsin H transcript variant 3 [Sus scrofa]
          Length = 251

 Score =  273 bits (698), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 126/204 (61%), Positives = 152/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 45  VSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQ 104

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI+YN G+  E+ YPY G+D  CKF  +     V D  NIT+  E+ +  AV L  P
Sbjct: 105 AFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNP 164

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG
Sbjct: 165 VSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWG 224

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 225 MNGYFLIERGKNMCGLAACASYPI 248


>gi|402875039|ref|XP_003901328.1| PREDICTED: pro-cathepsin H [Papio anubis]
          Length = 335

 Score =  273 bits (698), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 143/301 (47%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWMSKHHKTY-STEEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  YK+G+YSST 
Sbjct: 212 GDCKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYKTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|109082090|ref|XP_001108862.1| PREDICTED: cathepsin H isoform 2 [Macaca mulatta]
          Length = 335

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/301 (47%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWMSKHHKTY-STEEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  YK+G+YSST 
Sbjct: 212 GDCKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMIYKTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|355778231|gb|EHH63267.1| Cathepsin H, partial [Macaca fascicularis]
          Length = 305

 Score =  273 bits (697), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 143/301 (47%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 3   FHFKSWMSKHHKTY-STEEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 61

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 62  HKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 121

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 122 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 181

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  YK+G+YSST 
Sbjct: 182 GDCKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYKTGIYSSTS 241

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 242 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 301

Query: 312 V 312
           +
Sbjct: 302 I 302


>gi|403258371|ref|XP_003921746.1| PREDICTED: pro-cathepsin H [Saimiri boliviensis boliviensis]
          Length = 336

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 171/301 (56%), Gaps = 48/301 (15%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y   EE   R  TF+ N   I + N    ++++ +N           
Sbjct: 33  FHFKSWMAKHHKTYSREEEYHHRLQTFASNWRKINAHNNGNHTFKMAVNQFADMSFAEIK 92

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 93  RKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 152

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 153 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 212

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
             CKF        V D  NIT+  ED +  AV L  PVS AFEV   F  YK G+YSST 
Sbjct: 213 SDCKFQPGKAIGFVKDVANITIYDEDAMVEAVALYNPVSFAFEVTQDFMMYKRGIYSSTS 272

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 273 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 332

Query: 312 V 312
           +
Sbjct: 333 I 333


>gi|395502422|ref|XP_003755580.1| PREDICTED: pro-cathepsin H [Sarcophilus harrisii]
          Length = 334

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 150/204 (73%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG LE+A   A GK +SL+EQQLVDCAQ FNN GCNGGLPSQ
Sbjct: 128 VSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQLVDCAQDFNNHGCNGGLPSQ 187

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG CKF        V D  NIT   E+ +  AV    P
Sbjct: 188 AFEYIMYNKGIMGEDTYPYEGKDGTCKFQPNKAIAFVKDVANITAYDEEAMTEAVAHHNP 247

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV D F  Y  G+YS+ KC  +P  VNHAV+AVGYG E+G+PYW++KNSWG +WG
Sbjct: 248 VSFAFEVTDDFLSYHKGIYSNPKCSKSPDKVNHAVLAVGYGKENGIPYWIVKNSWGTSWG 307

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
           ++GYF +E GKNMCG+A CASYP+
Sbjct: 308 NNGYFLIERGKNMCGLADCASYPI 331


>gi|291410711|ref|XP_002721635.1| PREDICTED: cathepsin H [Oryctolagus cuniculus]
          Length = 333

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 176/301 (58%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF +N   I + N    ++++GLN           
Sbjct: 31  FHFKSWMSQHHKKY-SAEEYPRRLQTFVRNWRKINAHNNGNHTFQMGLNQFSDMSFAEIK 89

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 90  HKYLWTEPQNCSATKSNYLRGTGPYPSSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 149

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E++YPY   +
Sbjct: 150 SAVAIAGGKMLSLAEQQLVDCAQNFNNHGCEGGLPSQAFEYILYNKGIMGEDSYPYRAME 209

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF  +     V D  NITL  E+ +  AV L  PVS AFEV + F  Y+ G+YSST 
Sbjct: 210 GRCKFQPQKAIAFVKDVANITLNDEEAMVEAVALYNPVSFAFEVTEDFMQYRKGIYSSTS 269

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+GVPYW++KNSWG +WG +GYF +E GKNMCG+A CASYP
Sbjct: 270 CHKTPDKVNHAVLAVGYGEENGVPYWIVKNSWGSHWGMNGYFYIERGKNMCGLAACASYP 329

Query: 312 V 312
           +
Sbjct: 330 I 330


>gi|48145879|emb|CAG33162.1| CTSH [Homo sapiens]
          Length = 335

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWTSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST 
Sbjct: 212 GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|61372279|gb|AAX43816.1| cathepsin H [synthetic construct]
          Length = 336

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST 
Sbjct: 212 GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|114658412|ref|XP_001153217.1| PREDICTED: pro-cathepsin H isoform 6 [Pan troglodytes]
 gi|397478882|ref|XP_003810764.1| PREDICTED: pro-cathepsin H [Pan paniscus]
 gi|12803323|gb|AAH02479.1| Cathepsin H [Homo sapiens]
 gi|60655259|gb|AAX32193.1| cathepsin H [synthetic construct]
 gi|123979560|gb|ABM81609.1| cathepsin H [synthetic construct]
 gi|123994193|gb|ABM84698.1| cathepsin H [synthetic construct]
 gi|189054474|dbj|BAG37247.1| unnamed protein product [Homo sapiens]
 gi|410254318|gb|JAA15126.1| cathepsin H [Pan troglodytes]
 gi|410294916|gb|JAA26058.1| cathepsin H [Pan troglodytes]
 gi|410331109|gb|JAA34501.1| cathepsin H [Pan troglodytes]
          Length = 335

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST 
Sbjct: 212 GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|426379977|ref|XP_004056662.1| PREDICTED: pro-cathepsin H [Gorilla gorilla gorilla]
          Length = 335

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 151/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQ 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  P
Sbjct: 189 AFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNP 248

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG
Sbjct: 249 VSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPKWG 308

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 309 MNGYFLIERGKNMCGLAACASYPI 332


>gi|23110955|ref|NP_004381.2| pro-cathepsin H preproprotein [Homo sapiens]
 gi|288558851|sp|P09668.4|CATH_HUMAN RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|119619549|gb|EAW99143.1| cathepsin H [Homo sapiens]
          Length = 335

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST 
Sbjct: 212 GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|380798253|gb|AFE71002.1| pro-cathepsin H preproprotein, partial [Macaca mulatta]
          Length = 242

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 130/209 (62%), Positives = 153/209 (73%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC G
Sbjct: 31  KKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQG 90

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV
Sbjct: 91  GLPSQAFEYILYNKGIMGEDTYPYQGKDGDCKFRPGKAIGFVKDVANITIYDEEAMVEAV 150

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            L  PVS AFEV   F  YK+G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSW
Sbjct: 151 ALYNPVSFAFEVTQDFMMYKTGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSW 210

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG +GYF +E GKNMCG+A CASYP+
Sbjct: 211 GPQWGMNGYFLIERGKNMCGLAACASYPI 239


>gi|60827884|gb|AAX36817.1| cathepsin H [synthetic construct]
          Length = 336

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 174/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN           
Sbjct: 33  FHFKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIK 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKD
Sbjct: 152 SAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST 
Sbjct: 212 GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTS 271

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 272 CHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 331

Query: 312 V 312
           +
Sbjct: 332 I 332


>gi|50657027|emb|CAH04631.1| cathepsin H [Suberites domuncula]
          Length = 335

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 177/301 (58%), Gaps = 49/301 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  +  ++GK+Y + EE + R   F KN+  I + N +G SY L +N             
Sbjct: 35  FKEWQEKHGKVYSTEEESQSRLKVFMKNVIYIDNHNKQGHSYELEVNEYADMTLDEFKDQ 94

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVK+QG CGSCWTFSTTG LE+ 
Sbjct: 95  YLMEPQHCSATHSLKSDPPKYRDPPKAIDWRSKGAVTPVKNQGQCGSCWTFSTTGCLESH 154

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           +    G+ +SLSEQQLVDCAQAFNN GCNGGLPSQAFEYI YNGGLD+EE+YPY   D  
Sbjct: 155 HFLKTGQLVSLSEQQLVDCAQAFNNNGCNGGLPSQAFEYIHYNGGLDSEESYPYRAHDEK 214

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           C F    V   V + VNIT   E +L +AVG V PVS+A++V   FRFYK GVY S +C 
Sbjct: 215 CHFVPSEVSATVSNVVNITSKDEMQLYNAVGTVGPVSIAYDVSADFRFYKKGVYKSKECK 274

Query: 254 NTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
             P  VNHAV+AVGY   E G  YW++KNSWG  +G +GYF +  G+NMCG+A CASYP+
Sbjct: 275 TDPEHVNHAVLAVGYNTTESGEDYWIVKNSWGTKFGINGYFWIARGENMCGLADCASYPI 334

Query: 313 V 313
           V
Sbjct: 335 V 335


>gi|16506815|gb|AAL23962.1|AF426248_1 truncated cathepsin H [Homo sapiens]
          Length = 323

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 151/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 117 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQ 176

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  P
Sbjct: 177 AFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNP 236

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG
Sbjct: 237 VSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWG 296

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 297 MNGYFLIERGKNMCGLAACASYPI 320


>gi|344284284|ref|XP_003413898.1| PREDICTED: pro-cathepsin H-like [Loxodonta africana]
          Length = 335

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 129/209 (61%), Positives = 151/209 (72%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCA+ FNN GC G
Sbjct: 124 KKGHFVSPVKNQGACGSCWTFSTTGALESAIAIAGGKLLSLAEQQLVDCAKDFNNHGCQG 183

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN G+  E+ YPY G+D VCKF  +     V D  NITL  E+ +  AV
Sbjct: 184 GLPSQAFEYILYNKGIMGEDTYPYKGQDDVCKFQPKKAIAFVKDVANITLNDEEAMVEAV 243

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            L  PVS AFEV D F  Y  G+YSST C  TP  VNHAV+AVGYG E G+PYW++KNSW
Sbjct: 244 ALYNPVSFAFEVTDDFMKYSKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSW 303

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG  GYF +E GKNMCG+A CASYP+
Sbjct: 304 GPYWGMDGYFLIERGKNMCGLAACASYPI 332


>gi|387015020|gb|AFJ49629.1| Cathepsin H [Crotalus adamanteus]
          Length = 337

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 144/307 (46%), Positives = 176/307 (57%), Gaps = 48/307 (15%)

Query: 54  GQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----- 108
           G A     F  +A ++ + Y S EE + R   F  N   I   N    S+R+GLN     
Sbjct: 28  GSATGEQLFKAWASQHRRAYRSEEEFRHRLQIFLDNKQKIDKHNAGNSSFRMGLNQFSDM 87

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      +SPVK+QG CGSCWTFS
Sbjct: 88  TFTEFRKKYLWQEPQNCSATMGNFPRSAGPCPKAIDWRKKGKFVSPVKNQGSCGSCWTFS 147

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
           TTG LE+A     GK ++L+EQQL+DCAQ FNN GC+GGLPSQAFEYI YN GL  EEAY
Sbjct: 148 TTGCLESAIAIKTGKLLNLAEQQLIDCAQNFNNFGCSGGLPSQAFEYILYNKGLMDEEAY 207

Query: 186 PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSG 245
           PY  ++G CKF  +     + D VNI+L  E  L  AVG   PVS+AFEV + F  Y+ G
Sbjct: 208 PYRAQNGTCKFQPQKAVAFIKDVVNISLYDEQGLVQAVGTYNPVSIAFEVREDFVHYQEG 267

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIA 305
           VY+ST C  TP  VNHAV+AVGYG E GVP+W++KNSWG +WG  GYF +E GKNMCG+A
Sbjct: 268 VYTSTDCDKTPDKVNHAVLAVGYGEEGGVPFWIVKNSWGTSWGLDGYFNIERGKNMCGLA 327

Query: 306 TCASYPV 312
            CAS+PV
Sbjct: 328 DCASFPV 334


>gi|332252750|ref|XP_003275518.1| PREDICTED: pro-cathepsin H [Nomascus leucogenys]
          Length = 335

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 150/204 (73%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQ 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  P
Sbjct: 189 AFEYILYNKGIMGEDTYPYQGKDGYCKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNP 248

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y+ G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG
Sbjct: 249 VSFAFEVTQDFMMYRRGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWG 308

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 309 MNGYFLIERGKNMCGLAACASYPI 332


>gi|77735725|ref|NP_001029557.1| pro-cathepsin H precursor [Bos taurus]
 gi|115312126|sp|Q3T0I2.1|CATH_BOVIN RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74267711|gb|AAI02387.1| Cathepsin H [Bos taurus]
 gi|296475480|tpg|DAA17595.1| TPA: cathepsin H precursor [Bos taurus]
          Length = 335

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 140/310 (45%), Positives = 176/310 (56%), Gaps = 49/310 (15%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           ++   +     F  +  ++ K Y S EE   R   F+ NL  I + N +  ++++GLN  
Sbjct: 24  ELAANSLEKFHFQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQF 82

Query: 109 ----------------------------------------------ISPVKDQGHCGSCW 122
                                                         ++PVK+QG CGSCW
Sbjct: 83  SDMSFDELKRKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCW 142

Query: 123 TFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182
           TFSTTG+LE+A   A GK   L+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E
Sbjct: 143 TFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGE 202

Query: 183 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFY 242
           + YPY G+DG CK+        V D  NITL  E+ +  AV L  PVS AFEV   F  Y
Sbjct: 203 DTYPYRGQDGDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMMY 262

Query: 243 KSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMC 302
           + G+YSST C  TP  VNHAV+AVGYG E G+PYW++KNSWG NWG  GYF +E GKNMC
Sbjct: 263 RKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMC 322

Query: 303 GIATCASYPV 312
           G+A CAS+P+
Sbjct: 323 GLAACASFPI 332


>gi|29710|emb|CAA34734.1| unnamed protein product [Homo sapiens]
          Length = 335

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 151/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQ 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  P
Sbjct: 189 AFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNP 248

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG
Sbjct: 249 VSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWG 308

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 309 MNGYFLIERGKNMCGLAACASYPI 332


>gi|440910969|gb|ELR60703.1| Cathepsin H, partial [Bos grunniens mutus]
          Length = 329

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 140/310 (45%), Positives = 176/310 (56%), Gaps = 49/310 (15%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           ++   +     F  +  ++ K Y S EE   R   F+ NL  I + N +  ++++GLN  
Sbjct: 18  ELAANSLEKFHFQSWMVQHQKKYSS-EEYYHRLQVFASNLREINAHNARNHTFKMGLNQF 76

Query: 109 ----------------------------------------------ISPVKDQGHCGSCW 122
                                                         ++PVK+QG CGSCW
Sbjct: 77  SDMSFDELKRKYLWSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCW 136

Query: 123 TFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182
           TFSTTG+LE+A   A GK   L+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E
Sbjct: 137 TFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGE 196

Query: 183 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFY 242
           + YPY G+DG CK+        V D  NITL  E+ +  AV L  PVS AFEV   F  Y
Sbjct: 197 DTYPYRGQDGDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMMY 256

Query: 243 KSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMC 302
           + G+YSST C  TP  VNHAV+AVGYG E G+PYW++KNSWG NWG  GYF +E GKNMC
Sbjct: 257 RKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMC 316

Query: 303 GIATCASYPV 312
           G+A CAS+P+
Sbjct: 317 GLAACASFPI 326


>gi|16506813|gb|AAL23961.1|AF426247_1 cathepsin H [Homo sapiens]
          Length = 335

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 151/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQ 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  P
Sbjct: 189 AFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNP 248

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG
Sbjct: 249 VSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWG 308

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 309 MNGYFLIERGKNMCGLAACASYPI 332


>gi|146386356|gb|ABQ23966.1| cathepsin H [Oryctolagus cuniculus]
          Length = 215

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 152/204 (74%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQ
Sbjct: 10  VSPVKNQGACGSCWTFSTTGALESAVAIAGGKMLSLAEQQLVDCAQNFNNHGCEGGLPSQ 69

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E++YPY   +G CKF  +     V D  NITL  E+ +  AV L  P
Sbjct: 70  AFEYILYNKGIMGEDSYPYRAMEGRCKFQPQKAIAFVKDVANITLNDEEAMVEAVALYNP 129

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+GVPYW++KNSWG +WG
Sbjct: 130 VSFAFEVTEDFMQYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGVPYWIVKNSWGSHWG 189

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +E GKNMCG+A CASYP+
Sbjct: 190 MNGYFYIERGKNMCGLAACASYPI 213


>gi|426248750|ref|XP_004018122.1| PREDICTED: pro-cathepsin H [Ovis aries]
          Length = 355

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 139/301 (46%), Positives = 173/301 (57%), Gaps = 49/301 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
             F  +  ++ K Y S EE   R   F+ NL  I + N +  ++++GLN           
Sbjct: 53  FHFQSWMVQHQKKYSS-EEYHHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFAELK 111

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVK+QG CGSCWTFSTTG+LE
Sbjct: 112 RKYLWSEPQNCSATKSNYLRGTGPYPPSMDWREKGNFVTPVKNQGSCGSCWTFSTTGALE 171

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK   L+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ YPY G+D
Sbjct: 172 SAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGED 231

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
           G CK+        V D  NITL  E+ +  AV L  PVS AFEV   F  Y+ G+YSST 
Sbjct: 232 GDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALYNPVSFAFEVTADFMMYRKGIYSSTS 291

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E G+PYW++KNSWG +WG  GYF +E GKNMCG+A CAS+P
Sbjct: 292 CHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPHWGMKGYFLIERGKNMCGLAACASFP 351

Query: 312 V 312
           +
Sbjct: 352 I 352


>gi|334314327|ref|XP_001368532.2| PREDICTED: cathepsin H-like [Monodelphis domestica]
          Length = 344

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/209 (60%), Positives = 155/209 (74%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG LE+A   A GK +SL+EQQLVDCAQAFNN GCNG
Sbjct: 133 KKGNYVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAEQQLVDCAQAFNNHGCNG 192

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN G+  E+ YPY GKDG C+F  +     V D VNIT+  E+ +  AV
Sbjct: 193 GLPSQAFEYIMYNNGIMGEDTYPYEGKDGTCRFKPDKAIAFVKDVVNITIYDEEAMTEAV 252

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
               PVS AFEV + F  Y+ G+YS+ +C  +P  VNHAV+AVGYG  +G+ YW++KNSW
Sbjct: 253 AHHNPVSFAFEVTEDFMSYRDGIYSNPRCDKSPDKVNHAVLAVGYGKNNGILYWIVKNSW 312

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G +WG++GYF +E GKNMCG+A CASYPV
Sbjct: 313 GTSWGNNGYFLIERGKNMCGLADCASYPV 341


>gi|29708|emb|CAA30428.1| cathepsin H [Homo sapiens]
          Length = 248

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 153/209 (73%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC G
Sbjct: 37  KKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQG 96

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV
Sbjct: 97  GLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAV 156

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            L  PVS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSW
Sbjct: 157 ALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSW 216

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG +GYF +E GKNMCG+A CASYP+
Sbjct: 217 GPQWGMNGYFLIERGKNMCGLAACASYPI 245


>gi|171948778|gb|ACB59246.1| cathepsin H [Sus scrofa]
          Length = 297

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 126/207 (60%), Positives = 152/207 (73%), Gaps = 3/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLP-- 166
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLP  
Sbjct: 88  VSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPGL 147

Query: 167 -SQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
            SQAFEYI+YN G+  E+ YPY G+D  CKF  +     V D  NIT+  E+ +  AV L
Sbjct: 148 PSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVAL 207

Query: 226 VRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
             PVS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG 
Sbjct: 208 YNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGP 267

Query: 286 NWGDHGYFKMEMGKNMCGIATCASYPV 312
            WG +GYF +E GKNMCG+A CASYP+
Sbjct: 268 QWGMNGYFLIERGKNMCGLAACASYPI 294


>gi|449270628|gb|EMC81287.1| Cathepsin H, partial [Columba livia]
          Length = 261

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 129/209 (61%), Positives = 152/209 (72%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  ++PVK+QG CGSCWTFSTTG LE+A   A GK +SL+EQQLVDCAQAFNN GC+G
Sbjct: 50  KKGNYVTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSG 109

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN GL  E+ YPY  ++G CKF  E     V D +NIT   ED +  AV
Sbjct: 110 GLPSQAFEYILYNRGLMGEDTYPYRAENGTCKFQPEKAIAFVRDVINITQYDEDGMVEAV 169

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           G   PVS AFEV   F  Y+ GVYS+ +C +TP  VNHAV+AVGYG EDG P+W++KNSW
Sbjct: 170 GKHNPVSFAFEVTSNFMHYRKGVYSNPRCEHTPDKVNHAVLAVGYGEEDGTPFWIVKNSW 229

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG  GYF +E GKNMCG+A CASYPV
Sbjct: 230 GPLWGMDGYFLIERGKNMCGLAACASYPV 258


>gi|209732040|gb|ACI66889.1| Cathepsin H precursor [Salmo salar]
          Length = 330

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 137/248 (55%), Positives = 158/248 (63%), Gaps = 16/248 (6%)

Query: 81  LRFATFSKNLDLIRSTNCKG---------------LSYR-LGLNISPVKDQGHCGSCWTF 124
           + FA F K   L    NC                 + +R  G  +SPVK QGHCGSCWTF
Sbjct: 80  MSFAEFRKTFLLTEPQNCSATKGSHISSHGPYPGSVDWREKGNYVSPVKYQGHCGSCWTF 139

Query: 125 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184
           STTG LE+    A GK   LSEQQLVDCAQ FNN GC GGLPSQAFEY+KYN GL TE+ 
Sbjct: 140 STTGCLESVTAIATGKLPLLSEQQLVDCAQDFNNHGCMGGLPSQAFEYVKYNNGLMTEDD 199

Query: 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKS 244
           YPYTG DG C F  E     V D VNIT   E  +  AV  + PVS  +EV D F  YK 
Sbjct: 200 YPYTGHDGSCNFKPELAAAFVKDVVNITSYDEKGMVDAVARLNPVSFGYEVTDDFLHYKD 259

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 304
           GVYSST C NT  +VNHAV+AVGYG ++  PYW++KNSWG NWG  GYF +E G+NMCG+
Sbjct: 260 GVYSSTTCKNTTDNVNHAVLAVGYGEKNSTPYWIVKNSWGTNWGMDGYFLIERGRNMCGL 319

Query: 305 ATCASYPV 312
           A C+SYP+
Sbjct: 320 AACSSYPL 327


>gi|363737841|ref|XP_001232765.2| PREDICTED: pro-cathepsin H [Gallus gallus]
          Length = 327

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 128/204 (62%), Positives = 150/204 (73%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCWTFSTTG LE+A   A GK +SL+EQQLVDCAQAFNN GC+GGLPSQ
Sbjct: 121 VTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPSQ 180

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN GL  E+AYPY  ++G CKF  +     V D +NIT   E  +  AVG   P
Sbjct: 181 AFEYILYNKGLMGEDAYPYRAQNGTCKFQPDKAIAFVKDVINITQYDEAGMVEAVGKHNP 240

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y+ GVYS+ +C +TP  VNHAV+AVGYG EDG PYW++KNSWG  WG
Sbjct: 241 VSFAFEVTSDFMHYRKGVYSNPRCEHTPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWG 300

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
             GYF +E GKNMCG+A CASYPV
Sbjct: 301 MDGYFLIERGKNMCGLAACASYPV 324


>gi|449471885|ref|XP_004186123.1| PREDICTED: LOW QUALITY PROTEIN: pro-cathepsin H [Taeniopygia
           guttata]
          Length = 334

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/210 (62%), Positives = 153/210 (72%), Gaps = 6/210 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK QG CGSCWTFSTTG LE+A   A GK +SL+EQQLVDCAQAFNN GC+GGLPSQ
Sbjct: 122 VTPVKIQGACGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPSQ 181

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN---VGVQ---VLDSVNITLGAEDELQHA 222
           AFEYI YN GL  E++YPY  K+G C+F  +N   VG     V D +NIT   ED +  A
Sbjct: 182 AFEYILYNRGLMGEDSYPYRAKNGTCRFQPDNDIRVGKAIAFVKDVINITQYDEDGMVEA 241

Query: 223 VGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
           VG   PVS AFEV   F  Y+ GVYS+ +C +TP  VNHAV+AVGYG EDG PYW++KNS
Sbjct: 242 VGRHNPVSFAFEVTSDFMHYRKGVYSNPRCEHTPDKVNHAVLAVGYGQEDGTPYWIVKNS 301

Query: 283 WGENWGDHGYFKMEMGKNMCGIATCASYPV 312
           WG  WG  GYF +E GKNMCG+A CASYPV
Sbjct: 302 WGRLWGMQGYFLIERGKNMCGLAACASYPV 331


>gi|431920312|gb|ELK18347.1| Cathepsin H [Pteropus alecto]
          Length = 232

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 123/198 (62%), Positives = 144/198 (72%)

Query: 115 QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 174
            G CGSCWTFSTTG+LE+A     GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI+
Sbjct: 32  HGGCGSCWTFSTTGALESAIAIKTGKMLSLAEQQLVDCAQNFNNHGCKGGLPSQAFEYIR 91

Query: 175 YNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 234
           YN G+  E+ YPY GKDG CKF  E     V D  NIT+  E+ +  AV L  PVS AFE
Sbjct: 92  YNKGIMGEDTYPYQGKDGTCKFQPEKAIAFVKDVANITINDEEAMVEAVALYNPVSFAFE 151

Query: 235 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK 294
           V + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G PYW++KNSWG  WG +GYF 
Sbjct: 152 VTEDFMLYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGKPYWIVKNSWGPQWGMNGYFL 211

Query: 295 MEMGKNMCGIATCASYPV 312
           +E GKNMCG+A CASYP+
Sbjct: 212 IERGKNMCGLAACASYPI 229


>gi|225706914|gb|ACO09303.1| Cathepsin H precursor [Osmerus mordax]
          Length = 328

 Score =  264 bits (674), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 127/210 (60%), Positives = 152/210 (72%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  ++ VK+QG CGSCWTFSTTG LE+    + GK + LSEQQLVDCAQAFNN GCNG
Sbjct: 119 KKGNYVTNVKNQGPCGSCWTFSTTGCLESVTAISTGKLLQLSEQQLVDCAQAFNNHGCNG 178

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYIKYN GL TE+ YPYT +DG CKF  E     V D VNIT+  E  +  AV
Sbjct: 179 GLPSQAFEYIKYNKGLMTEDDYPYTAQDGTCKFKPERAAAFVKDVVNITMYDEMGMVDAV 238

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
             + PVS+A+EV   F  Y SGVYSS++C NT   VNHAV+AVGY  E+  PYW++KNSW
Sbjct: 239 ARLNPVSMAYEVTSDFMHYHSGVYSSSECHNTTDTVNHAVLAVGYDEENVTPYWIVKNSW 298

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           G  WG  GYF +E GKNMCG++ C+SYP+V
Sbjct: 299 GPFWGMKGYFFIERGKNMCGLSACSSYPLV 328


>gi|345798093|ref|XP_536212.3| PREDICTED: pro-cathepsin H [Canis lupus familiaris]
          Length = 350

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/302 (46%), Positives = 173/302 (57%), Gaps = 50/302 (16%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           + F  +A ++ K Y S EE   R  TF  N   I + N    ++++GLN           
Sbjct: 47  VHFKSWAVQHQKKYSS-EEYLQRLQTFVGNWRKINAHNAGNHTFKMGLNQFSDMNFAEIK 105

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 106 HKYLWSEPQNCSATKGNYLRGTGPYPPFVDWRKKGKFVSPVKNQGSCGSCWTFSTTGALE 165

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG-GLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           +A     GK +SL+EQQLVDCAQ FNN GC G G P QAFEYI+YN G+  E++YPY G+
Sbjct: 166 SAIAIKSGKLLSLAEQQLVDCAQNFNNHGCQGYGAPLQAFEYIRYNKGIMGEDSYPYKGQ 225

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSST 250
           DG CK+        V D  NIT+  E  +  AV L  PVS AFEV   F  Y+ G+YSST
Sbjct: 226 DGDCKYQPSKAIAFVKDVANITINDEQAMVEAVALYNPVSFAFEVTSDFMMYRKGIYSST 285

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF ME GKNMCG+A CASY
Sbjct: 286 SCHKTPDKVNHAVLAVGYGEQNGIPYWIVKNSWGPQWGMNGYFLMERGKNMCGLAACASY 345

Query: 311 PV 312
           P+
Sbjct: 346 PI 347


>gi|330376140|gb|AEC13302.1| cathepsin H [Gallus gallus]
          Length = 329

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 149/204 (73%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCWTFSTTG LE+A   A GK +SL+EQ LVDCAQAFNN GC+GGLPSQ
Sbjct: 123 VTPVKNQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQLLVDCAQAFNNHGCSGGLPSQ 182

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN GL  E+AYPY  ++G CKF  +     V D +NIT   E  +  AVG   P
Sbjct: 183 AFEYILYNKGLMGEDAYPYRAQNGTCKFQPDKAIAFVKDVINITQYDEAGMVEAVGKHNP 242

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV   F  Y+ GVYS+ +C +TP  VNHAV+AVGYG EDG PYW++KNSWG  WG
Sbjct: 243 VSFAFEVTSDFMHYRKGVYSNPRCEHTPDKVNHAVLAVGYGEEDGRPYWIVKNSWGPLWG 302

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
             GYF +E GKNMCG+A CASYPV
Sbjct: 303 MDGYFLIERGKNMCGLAACASYPV 326


>gi|209731972|gb|ACI66855.1| Cathepsin H precursor [Salmo salar]
          Length = 328

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 133/248 (53%), Positives = 160/248 (64%), Gaps = 16/248 (6%)

Query: 81  LRFATFSKNLDLIRSTNC---------------KGLSYRLGLN-ISPVKDQGHCGSCWTF 124
           L FA F K+  L    NC               + + +R   N ++ VK+QG CGSCWTF
Sbjct: 78  LTFAEFRKSFLLTEPQNCSATKGSHVSSNGPYPESVDWRKKGNYVTAVKNQGSCGSCWTF 137

Query: 125 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184
           STTG LE+    A GK + LSEQQLVDCAQAFNN GCNGGLPSQAFEYIK+N G+ TE+ 
Sbjct: 138 STTGCLESVTAIATGKLLQLSEQQLVDCAQAFNNHGCNGGLPSQAFEYIKFNKGIMTEDD 197

Query: 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKS 244
           YPYT  D  CKF ++     V D VNIT   E  +  AV    PVS+A+EV   F  Y  
Sbjct: 198 YPYTAHDDTCKFKTDLAAAFVKDVVNITKYDEMGMVDAVARFNPVSLAYEVTSDFMHYDG 257

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 304
           GVY+S +C NT   VNHAV+AVGYG E G PYW++KNSWG +WG  GYF +E GKNMCG+
Sbjct: 258 GVYTSKECHNTTDTVNHAVLAVGYGEEKGTPYWIVKNSWGSSWGMKGYFFIERGKNMCGL 317

Query: 305 ATCASYPV 312
           A C+SYP+
Sbjct: 318 AACSSYPL 325


>gi|387915132|gb|AFK11175.1| cathspsin H [Callorhinchus milii]
          Length = 330

 Score =  259 bits (663), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 138/304 (45%), Positives = 176/304 (57%), Gaps = 49/304 (16%)

Query: 57  RHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------- 108
           +  +SF  +  ++ K Y S EE   R  TF +N   +   N    SYR+GLN        
Sbjct: 25  QEIVSFKTWMTQHNKHYSS-EEYSYRLRTFIQNKRKVEEHNSGRHSYRMGLNQFSDMTFS 83

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++PVK+QG CGSCWTFSTTG
Sbjct: 84  EFKKLYLLREPQNCSATRGNHVLSMGPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTG 143

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
            LE+A     GK +SL+EQQLVDCA A+ N GCNGGLPSQAFEYIKYNGGL+ E+ YPYT
Sbjct: 144 CLESAIAIKTGKLLSLAEQQLVDCAGAYKNHGCNGGLPSQAFEYIKYNGGLEAEKDYPYT 203

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYS 248
            +D  C++        V + VNIT   E+ +  AV  + PVS+AFEV D F  Y+ GVYS
Sbjct: 204 AQDQHCQYQPNKAVAFVKEVVNITQYDENGIVDAVARLNPVSIAFEVTDDFFQYEGGVYS 263

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 308
           ++ C +TP  VNHAV+AVGYGV++G  YW++KNSWG  WG +GYF +  GKNMCG+A C 
Sbjct: 264 NSNCDSTPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACP 323

Query: 309 SYPV 312
           SYP+
Sbjct: 324 SYPI 327


>gi|326926970|ref|XP_003209669.1| PREDICTED: cathepsin H-like [Meleagris gallopavo]
          Length = 323

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 127/209 (60%), Positives = 148/209 (70%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           R G        QG CGSCWTFSTTG LE+A   A GK +SL+EQQLVDCAQAFNN GC+G
Sbjct: 112 RCGATPDRFSTQGPCGSCWTFSTTGCLESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSG 171

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN GL  E+AYPY  ++G CKF  +     V D +NIT   E  +  AV
Sbjct: 172 GLPSQAFEYILYNKGLMGEDAYPYRAQNGTCKFQPDKAVAFVRDVINITQYDEASMVEAV 231

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           G   PVS AFEV + F  Y+ GVYS+ +C +TP  VNHAV+AVGYG EDG+PYW++KNSW
Sbjct: 232 GKHNPVSFAFEVTNDFMHYRKGVYSNPRCEHTPDKVNHAVLAVGYGEEDGLPYWIVKNSW 291

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG  GYF +E GKNMCG+A CASYPV
Sbjct: 292 GSLWGMDGYFLIERGKNMCGLAACASYPV 320


>gi|348505824|ref|XP_003440460.1| PREDICTED: pro-cathepsin H-like [Oreochromis niloticus]
          Length = 324

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 127/210 (60%), Positives = 148/210 (70%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  ++PVK+QG CGSCWTFSTTG LE+      GK + LSEQQLVDCAQ FNN GCNG
Sbjct: 115 KKGNYVTPVKNQGGCGSCWTFSTTGCLESVTAINKGKLVPLSEQQLVDCAQDFNNHGCNG 174

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN GL TE+ YPYT  +G C +        V   VNIT   E E+  AV
Sbjct: 175 GLPSQAFEYIMYNKGLMTEQDYPYTAFEGKCVYKPGKAAAFVNSVVNITAYNELEMVDAV 234

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           G   PVS AFEV   F  Y  GVY+ST+C NT   VNHAV+AVGYG E+G PYW++KNSW
Sbjct: 235 GTHNPVSFAFEVTSDFMSYHQGVYTSTECHNTTDKVNHAVLAVGYGQENGTPYWIVKNSW 294

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           G +WG +GYF +E GKNMCG+A CAS+PVV
Sbjct: 295 GSSWGMNGYFLIERGKNMCGLAACASFPVV 324


>gi|318844127|ref|NP_001187181.1| cathspsin H precursor [Ictalurus punctatus]
 gi|196475594|gb|ACG76366.1| cathspsin H [Ictalurus punctatus]
          Length = 326

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/210 (60%), Positives = 149/210 (70%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  ++ VK+QG CGSCWTFSTTG LE+    A GK   L+EQQLVDCA AFNN GCNG
Sbjct: 117 KKGNYVTEVKNQGACGSCWTFSTTGCLESVTAIATGKLPLLAEQQLVDCAGAFNNHGCNG 176

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN GL TE+ YPY G+DG CKF  +     V D VNIT   E  +  AV
Sbjct: 177 GLPSQAFEYIMYNKGLMTEDDYPYVGRDGPCKFDPKLAAAFVKDVVNITKYDEMGIVDAV 236

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
             + PVS+AFEV+  F  YK GVY+S +C NT   VNHAV+AVGY  E+G PYW++KNSW
Sbjct: 237 ARLNPVSIAFEVLPEFMHYKDGVYTSNECHNTTETVNHAVLAVGYAEENGTPYWIVKNSW 296

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           G  WG  GYF +E G+NMCG+A CASYP+V
Sbjct: 297 GPQWGIDGYFYIERGQNMCGLAACASYPLV 326


>gi|308322047|gb|ADO28161.1| cathepsin H [Ictalurus furcatus]
          Length = 326

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/210 (60%), Positives = 149/210 (70%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  ++ VK+QG CGSCWTFSTTG LE+    A GK   L+EQQLVDCA AFNN GCNG
Sbjct: 117 KKGNYVTEVKNQGACGSCWTFSTTGCLESVTAIATGKLPLLAEQQLVDCAGAFNNHGCNG 176

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN GL TE+ YPY G+DG CKF  +     V D VNIT   E  +  AV
Sbjct: 177 GLPSQAFEYIMYNKGLMTEDDYPYVGRDGPCKFDPKLAAAFVKDVVNITKYDEMGIVDAV 236

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
             + PVS+AFEV+  F  YK GVY+S +C NT   VNHAV+AVGY  E+G PYW++KNSW
Sbjct: 237 ARLNPVSIAFEVLPEFMHYKDGVYTSNECHNTTETVNHAVLAVGYAEENGTPYWIVKNSW 296

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           G  WG  GYF +E G+NMCG+A CASYP+V
Sbjct: 297 GPQWGIDGYFYIERGQNMCGLAACASYPLV 326


>gi|410907221|ref|XP_003967090.1| PREDICTED: pro-cathepsin H-like [Takifugu rubripes]
          Length = 324

 Score =  257 bits (656), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 137/276 (49%), Positives = 161/276 (58%), Gaps = 24/276 (8%)

Query: 62  FARFARRYGKIYESVEEMKLR--------FATFSKNLDLIRSTNC--------------- 98
           F    RR  K  E      +R        FA F K+       NC               
Sbjct: 49  FTENKRRIDKHNEGNHSFAMRLNQYSDMTFAEFRKHFLWAEPQNCSATKGSYIQTNSPHP 108

Query: 99  KGLSYRLGLN-ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN 157
           + + +R   N ++PVK+QG CGSCWTFSTTG LE+      GK + LSEQQLVDCAQ FN
Sbjct: 109 ESIDWRKKGNYVTPVKNQGSCGSCWTFSTTGCLESVTAINSGKLVPLSEQQLVDCAQDFN 168

Query: 158 NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAED 217
           N GCNGGLPSQAFEYIKYN GL TE  YPYT  +  C +  E     V + VNIT   E 
Sbjct: 169 NHGCNGGLPSQAFEYIKYNKGLMTESDYPYTAFEDKCTYKPELAAAFVKNVVNITAYDEK 228

Query: 218 ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           E++ AV    PVS AFEV   F  Y SGVYSS+ C  T   VNHAV+AVGYG E+G PYW
Sbjct: 229 EMEDAVATRNPVSFAFEVTPDFMHYSSGVYSSSTCHTTTDKVNHAVLAVGYGSENGTPYW 288

Query: 278 LIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           ++KNSWG  WG  GYF +  GKNMCG+A C+S+P V
Sbjct: 289 IVKNSWGPGWGQDGYFLIMRGKNMCGLAACSSFPEV 324


>gi|146168075|ref|XP_001016705.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|146145247|gb|EAR96460.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 343

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 138/297 (46%), Positives = 191/297 (64%), Gaps = 26/297 (8%)

Query: 32  NPIRLVSSDGLRDFETSVLQVIGQARHALS-FARFARRYGKI-YESVEEMKLR------F 83
           NP+    SD  R F+  +  +I   +H L+   +F ++  K  +++ EE++         
Sbjct: 52  NPL----SDRFRLFKKRLTNII---KHNLNPHKKFTQKINKFTFKTQEEIRSLNAAQNCS 104

Query: 84  ATFSKNLDLIRSTNCKGL----SYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
           AT  +N+ + ++ N K L     +R    ++PVKDQG CGSCWTFSTTG+LE+  H A  
Sbjct: 105 ATARENMSVKKTYNLKDLPQYVDWRTKGVVTPVKDQGECGSCWTFSTTGALES--HWALH 162

Query: 140 KG---ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
            G   + LSEQQL+DCA AFNN GC+GGLPSQA+EYI Y GGL+TE  YPY G D  C+F
Sbjct: 163 TGNAPLLLSEQQLIDCAGAFNNFGCDGGLPSQAYEYISYAGGLETEGDYPYEGTDNSCEF 222

Query: 197 SSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTP 256
           +   V  +V+ S NIT   E+EL + +  V PVS+A+E  D F  Y+ G+YS+  C  +P
Sbjct: 223 NRAQVAAKVVSSYNITFQDENELIYHLATVGPVSIAYECTDDFMDYEGGIYSNPSCSKSP 282

Query: 257 MDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            DVNHAV+AVGY +     Y+++KNSWGE+WG +GYF +E+G NMCG+A CASYP+V
Sbjct: 283 EDVNHAVLAVGYNLTGN--YYIVKNSWGEDWGINGYFYIELGSNMCGLADCASYPIV 337


>gi|313221004|emb|CBY31836.1| unnamed protein product [Oikopleura dioica]
          Length = 323

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 174/314 (55%), Gaps = 51/314 (16%)

Query: 50  LQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN- 108
           L +   A+  L F  +   + K YE+ EE K R   F +N+  I   N +  S+  GLN 
Sbjct: 7   LGLFASAKAGL-FEDWTAEHWKSYETAEEEKFRKGVFEENVAKIEQINKENRSWTAGLNK 65

Query: 109 ------------------------------------------------ISPVKDQGHCGS 120
                                                           +SPVKDQG CGS
Sbjct: 66  FSDLTWDEFQHFYLMQAEQDCSATSYNSKEYLAKQPMPTSWDWRKDNKVSPVKDQGQCGS 125

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLD 180
           CWTFSTTG++EA       +  +LSEQQLVDCA AFNN GCNGGLPSQAFEYI    G+ 
Sbjct: 126 CWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIAAAPGIM 185

Query: 181 TEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFR 240
           TE  YPYT KDG C F  +   V V  SVNIT G E E+  A+ + +P+S+AFEVVD F 
Sbjct: 186 TEADYPYTAKDGNCVFDQKKAAVHVYGSVNITRGDEVEMAEAMVMYQPISIAFEVVDDFM 245

Query: 241 FYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGK 299
            YKSG YSS  C  +P DVNHAV+AVG+G +  G  +W +KNSW ++WG+ GYF ++ G 
Sbjct: 246 HYKSGTYSSKDCKGSPTDVNHAVLAVGFGTDGAGTDFWTVKNSWSKDWGNQGYFNIQRGV 305

Query: 300 NMCGIATCASYPVV 313
           NMCG++ C S+ ++
Sbjct: 306 NMCGLSQCTSFALI 319


>gi|47224192|emb|CAG13112.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 327

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/254 (51%), Positives = 165/254 (64%), Gaps = 8/254 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-ISPVKDQGHC 118
           ++FA F +R+  ++   +       ++ K      S   + + +R   N ++PVK+QG C
Sbjct: 79  MTFAEFRKRF--LWSEPQNCSATKGSYMK----TNSPQPESIDWRTKGNYVTPVKNQGAC 132

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCWTFSTTG LE+      GK + LSEQQLVDCA  FNN GCNGGLPSQAFEYIKYN G
Sbjct: 133 GSCWTFSTTGCLESVTAINTGKLVPLSEQQLVDCAWDFNNHGCNGGLPSQAFEYIKYNKG 192

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG 238
           L TE  YPYT  +G CK+  E     V + VNIT   E  ++ AV    PVS AFEV D 
Sbjct: 193 LMTESGYPYTAFEGKCKYKPELAAAFVKNVVNITAYDEKGMEDAVATHNPVSFAFEVTDD 252

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEM 297
           F  YK GVYSS++C  T   VNHAV+AVGYG  +  VPYW++KNSWG  WG++GYF +E 
Sbjct: 253 FMHYKGGVYSSSRCHKTTDKVNHAVLAVGYGNNNSSVPYWIVKNSWGPYWGENGYFLIER 312

Query: 298 GKNMCGIATCASYP 311
           GKNMCG+A C+SYP
Sbjct: 313 GKNMCGLAACSSYP 326


>gi|37788267|gb|AAO64473.1| cathepsin H precursor [Fundulus heteroclitus]
          Length = 345

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 129/234 (55%), Positives = 152/234 (64%), Gaps = 1/234 (0%)

Query: 81  LRFATFSKNLDLIRSTNCKGLSYRLGLN-ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
           + F  F K   +        + +R   N I+PVK QG CGSCWTFSTTG LE+    A  
Sbjct: 112 MTFNEFRKAFLMSEGPQPDSIDWRKKGNYITPVKTQGSCGSCWTFSTTGCLESVTAIATV 171

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
           K + LSEQQLVDCAQ FNN GCNGGLPSQAFEYI YN GL TE+ YPY   +G+C +   
Sbjct: 172 KLVPLSEQQLVDCAQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQDYPYKFVEGICSYKPS 231

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDV 259
                V +  NIT   E  +  AVG + PVS AFEV D F  Y+ GVY+ST C NT   V
Sbjct: 232 LAAAFVKEVRNITAYDEMGMVDAVGTLNPVSFAFEVTDDFMHYREGVYTSTTCHNTTDKV 291

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NHAV+AVGYG E G PYW++KNSWG +WG  GYF +E GKNMCG+A C+S PVV
Sbjct: 292 NHAVLAVGYGQEKGTPYWIVKNSWGSSWGIDGYFLIERGKNMCGLAACSSSPVV 345


>gi|340380717|ref|XP_003388868.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 337

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/257 (52%), Positives = 166/257 (64%), Gaps = 9/257 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L+FA F + Y      + E +   AT       + + +   + +R    I+PVKDQG CG
Sbjct: 87  LTFAEFKKIY------LTEPQHCSATNGNFQKPVNARDPVAVDWREKNVITPVKDQGKCG 140

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCWTFSTTG LEA +    G+ ISLSEQQLVDCA AFNN GCNGGLPSQAFEYIKYNGG+
Sbjct: 141 SCWTFSTTGCLEAHHAIKTGQLISLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIKYNGGI 200

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF 239
           ++E  Y YT KDGVC+F+S  V   V D VNIT  AE ++  AV  V PVS+AFEV   F
Sbjct: 201 ESESNYNYTAKDGVCRFNSSLVAATVSDVVNITKDAEGDIGTAVANVGPVSIAFEVTKSF 260

Query: 240 RFYKSGVYSS--TKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKME 296
           + YK GVY      C  +P  VNHAV+ VGY   + G  YW++KNSW  +WG  GYF + 
Sbjct: 261 QHYKKGVYQGEIEVCSQSPDKVNHAVLVVGYNQTKLGEEYWIVKNSWSASWGMDGYFWIR 320

Query: 297 MGKNMCGIATCASYPVV 313
            G N CG+ATCASYP+V
Sbjct: 321 RGHNACGLATCASYPIV 337


>gi|392873946|gb|AFM85805.1| cathepsin H [Callorhinchus milii]
          Length = 259

 Score =  253 bits (647), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 120/204 (58%), Positives = 150/204 (73%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCWTFSTTG LE+A     GK +SL+EQQLVDCA A+ N GCNGGLPSQ
Sbjct: 53  VTPVKNQGGCGSCWTFSTTGCLESAIAIKTGKLLSLAEQQLVDCAGAYKNHGCNGGLPSQ 112

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIKYNGGL+ E+ YPYT +D  C++        V + VNIT   E+ +  AV  + P
Sbjct: 113 AFEYIKYNGGLEAEKDYPYTAQDQHCQYQPNKAVAFVKEVVNITQYDENGIVDAVARLNP 172

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS+AFEV D F  Y+ GVYS++ C +TP  VNHAV+AVGYGV++G  YW++KNSWG  WG
Sbjct: 173 VSIAFEVTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWG 232

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
            +GYF +  GKNMCG+A C SYP+
Sbjct: 233 LNGYFYIIRGKNMCGLAACPSYPI 256


>gi|313213098|emb|CBY36961.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  253 bits (647), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 174/317 (54%), Gaps = 54/317 (17%)

Query: 50  LQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN- 108
           L +   A+  L F  +   + K YE+ E+ K R   F +N+  I   N +  S+  GLN 
Sbjct: 7   LGLFASAKAGL-FEDWTSEHWKSYETAEDEKFRKGVFEENIAKIEQINKENRSWTAGLNK 65

Query: 109 ---------------------------------------------------ISPVKDQGH 117
                                                              +SPVKDQG 
Sbjct: 66  FSDLTWDEFQHFYLMQAGQDCSATSYNSKEYLAKGVEQPMPTSWDWRKDNKVSPVKDQGQ 125

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSCWTFSTTG++EA       +  +LSEQQLVDCA AFNN GCNGGLPSQAFEYI    
Sbjct: 126 CGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIAAAP 185

Query: 178 GLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           G+ TE  YPYT KDG C F  +   V V  SVNIT G E E+  A+ + +P+S+AFEVVD
Sbjct: 186 GIMTEADYPYTAKDGNCVFDQKKAAVHVYGSVNITRGDEVEMAEAMVMYQPISIAFEVVD 245

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKME 296
            F  YKSG YSS  C  +P DVNHAV+AVG+G +  G  +W +KNSW ++WG+ GYF ++
Sbjct: 246 DFMHYKSGTYSSKDCKGSPTDVNHAVLAVGFGTDGAGTDFWTVKNSWSKDWGNQGYFNIQ 305

Query: 297 MGKNMCGIATCASYPVV 313
            G NMCG++ C S+ ++
Sbjct: 306 RGVNMCGLSQCTSFALI 322


>gi|298708365|emb|CBJ48428.1| Cathepsin H [Ectocarpus siliculosus]
          Length = 668

 Score =  253 bits (646), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/293 (47%), Positives = 176/293 (60%), Gaps = 29/293 (9%)

Query: 45  FETSVLQVIGQARHALSFARFARRYGKI-YESVEEMKLRFATFSKNLDLIRSTNCK---- 99
           F  ++ Q +  A    S++    R+  + +E  +  +L F +      L  S NC     
Sbjct: 380 FRDNLRQAVDDAATPRSYSLGLNRFSDMTWEEFQATRLGFGSA-----LSASQNCSATHV 434

Query: 100 GLSYR-LGLN----------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
           G  YR LGL+                +S VK+Q HCGSCWTFSTTG LE+ ++   G+ +
Sbjct: 435 GSQYRALGLSKGRAPPAARDWRDLGAVSVVKNQDHCGSCWTFSTTGCLESHHYLRTGEMV 494

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENV 201
            LSEQQL+DCA A++N GCNGGLPS AFEYI   GGLDTEE YPY  ++ G+C F+   +
Sbjct: 495 LLSEQQLLDCAGAYDNHGCNGGLPSHAFEYIASAGGLDTEEVYPYMAEESGLCSFADRGI 554

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNH 261
           G  V+ SVNIT   E EL  AVG   PVSVAF+V   F+ Y  GVY +  C   P  VNH
Sbjct: 555 GADVMRSVNITFQDERELLEAVGNTGPVSVAFQVAPDFKAYAGGVYDNPSCSTLPEQVNH 614

Query: 262 AVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           AV+ VGYG  E+GV YW+IKNSWG  WG  G+F M  GKNMCG+A CAS+P+V
Sbjct: 615 AVLCVGYGTTEEGVDYWIIKNSWGPEWGMDGFFHMARGKNMCGVADCASFPLV 667


>gi|313229615|emb|CBY18430.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  253 bits (645), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 174/317 (54%), Gaps = 54/317 (17%)

Query: 50  LQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN- 108
           L +   A+  L F  +   + K YE+ E+ K R   F +N+  I   N +  S+  GLN 
Sbjct: 7   LGLFASAKAGL-FEDWTAEHWKSYETAEDEKFRKGVFEENVAKIEKINKENRSWTAGLNK 65

Query: 109 ---------------------------------------------------ISPVKDQGH 117
                                                              +SPVKDQG 
Sbjct: 66  FSDLTWDEFQHFYLMQAGQDCSATSYNSKEYLAKGVEQPMPTSWDWRKDNKVSPVKDQGQ 125

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSCWTFSTTG++EA       +  +LSEQQLVDCA AFNN GCNGGLPSQAFEYI    
Sbjct: 126 CGSCWTFSTTGNVEAGEAIHLNEYHTLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIAAAP 185

Query: 178 GLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           G+ TE  YPYT KDG C F  +   V V  SVNIT G E E+  A+ + +P+S+AFEVVD
Sbjct: 186 GIMTEADYPYTAKDGNCVFDQKKAAVHVYGSVNITRGDEVEMAEAMVMYQPISIAFEVVD 245

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKME 296
            F  YKSG YSS  C  +P DVNHAV+AVG+G +  G  +W +KNSW ++WG+ GYF ++
Sbjct: 246 DFMHYKSGTYSSKDCKGSPTDVNHAVLAVGFGTDGAGTDFWTVKNSWSKDWGNQGYFNIQ 305

Query: 297 MGKNMCGIATCASYPVV 313
            G NMCG++ C S+ ++
Sbjct: 306 RGVNMCGLSQCTSFALI 322


>gi|260821804|ref|XP_002606293.1| hypothetical protein BRAFLDRAFT_57270 [Branchiostoma floridae]
 gi|229291634|gb|EEN62303.1| hypothetical protein BRAFLDRAFT_57270 [Branchiostoma floridae]
          Length = 246

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 118/205 (57%), Positives = 148/205 (72%), Gaps = 1/205 (0%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +S VKDQGHCGSCWTFS TG LE+     FG  ++LSEQQLV CAQ FNN GC GGLPSQ
Sbjct: 37  VSGVKDQGHCGSCWTFSATGCLESVTAITFGAPMNLSEQQLVSCAQGFNNHGCEGGLPSQ 96

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY+K+  G+++E+ YPYT KDG C F++      V D VNIT G EDE+  AVG + P
Sbjct: 97  AWEYVKWAQGIESEKDYPYTAKDGKCMFNTNKTIAYVRDVVNITQGDEDEILQAVGTLNP 156

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGENW 287
           VS+A++VV  F+ YK GVYSS  C      VNHAV+ VGYG ++ V PYW++KNSWG +W
Sbjct: 157 VSIAYQVVADFKLYKKGVYSSKLCHRDQEHVNHAVLVVGYGEDESVIPYWIVKNSWGPSW 216

Query: 288 GDHGYFKMEMGKNMCGIATCASYPV 312
           G  GYF +E  +NMCG+A CA+YP+
Sbjct: 217 GMDGYFLIERNQNMCGLAECAAYPL 241


>gi|47086663|ref|NP_997853.1| cathepsin H precursor [Danio rerio]
 gi|45709087|gb|AAH67615.1| Cathepsin H [Danio rerio]
          Length = 330

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 155/248 (62%), Gaps = 16/248 (6%)

Query: 81  LRFATFSKNLDLIRSTNCKG---------------LSYRL-GLNISPVKDQGHCGSCWTF 124
           + FA F K   L    NC                 + +R  G  I+ VK+QG CGSCWTF
Sbjct: 80  MTFAEFKKTYLLTEPQNCSATRGNHVSSNGLYPDAIDWRTKGHYITDVKNQGPCGSCWTF 139

Query: 125 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184
           STTG LE+    A GK + L+EQQL+DCA  F+N GCNGGLPS AFEYI YN GL TE+ 
Sbjct: 140 STTGCLESVTAIATGKLLQLAEQQLIDCAGDFDNHGCNGGLPSHAFEYIMYNKGLMTEDD 199

Query: 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKS 244
           YPY  K G C+F  +     V + VNIT   E  +  AV  + PVS A+EV   F  YK 
Sbjct: 200 YPYQAKGGQCRFKPQLAAAFVKEVVNITKYDEMGMVDAVARLNPVSFAYEVTSDFMHYKD 259

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 304
           G+Y+ST+C NT   VNHAV+AVGY  E+G PYW++KNSWG NWG  GYF +E GKNMCG+
Sbjct: 260 GIYTSTECHNTTDMVNHAVLAVGYAEENGTPYWIVKNSWGTNWGIKGYFYIERGKNMCGL 319

Query: 305 ATCASYPV 312
           A C+SYP+
Sbjct: 320 AACSSYPI 327


>gi|403364285|gb|EJY81901.1| Cathepsin H [Oxytricha trifallax]
          Length = 363

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 124/211 (58%), Positives = 152/211 (72%), Gaps = 4/211 (1%)

Query: 103 YRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCN 162
           +R    ++PVKDQG CGSCWTFST G+LEA +   + +  +LSEQQLVDCA A++N GCN
Sbjct: 141 WREHNGVTPVKDQGSCGSCWTFSTVGTLEAHFLIKYQQSRNLSEQQLVDCAGAYDNYGCN 200

Query: 163 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF--SSENVGVQVLDSVNITLGAEDELQ 220
           GGLPS AF+YI  NGG+ TE AYPY  KD  C    S ++VGV V  SVN+T  +EDEL 
Sbjct: 201 GGLPSHAFQYISDNGGIATEAAYPYFAKDRPCTIQQSQKSVGV-VGGSVNLT-KSEDELA 258

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
            A+    PVS+A+EV+D F  Y SGVY++  C N P DVNHAVVAVG+G E+GV YWL+K
Sbjct: 259 IAIFQHGPVSIAYEVIDDFMDYHSGVYTTKDCKNGPDDVNHAVVAVGFGTENGVDYWLVK 318

Query: 281 NSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           NSW   WGD+GYFK++ G NMCGI  C SYP
Sbjct: 319 NSWSTKWGDNGYFKIQRGVNMCGINNCNSYP 349


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 135/310 (43%), Positives = 176/310 (56%), Gaps = 59/310 (19%)

Query: 60  LSFARFARRYGKIY-ESVEEMKLRFATFSKNLDLIRSTNCKGL-SYRLGLNI-------- 109
           + F  + R +GK Y ++VEE+  R A +  N  L+ + N  G+ SY LG+NI        
Sbjct: 28  MEFEAWKRTFGKSYSDAVEEINRR-AVWEANKMLVDAHNGAGIHSYTLGMNIFADLTHEE 86

Query: 110 --------------------------------------------SPVKDQGHCGSCWTFS 125
                                                       +PVKDQG CGSCW+FS
Sbjct: 87  FKRFYLGTKVDLNRPRSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQGQCGSCWSFS 146

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
           TTGS+E  + +  G+ +SLSEQ LVDC++A  NQGCNGGL   AF+YI  N G+DTE +Y
Sbjct: 147 TTGSVEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKGIDTEASY 206

Query: 186 PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKS 244
           PYT KDG CKF++ NVG  +    +IT G+E +LQ+AV  V PVSVA +   + F+ Y S
Sbjct: 207 PYTAKDGTCKFNAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKNSFQLYTS 266

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCG 303
           GVY+  KC +T +D  H V+A GYG  +G PYWL+KNSWG +WG  GY  M     N CG
Sbjct: 267 GVYNEKKCSSTSLD--HGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWMSRNANNQCG 324

Query: 304 IATCASYPVV 313
           IAT ASYP+V
Sbjct: 325 IATSASYPIV 334


>gi|395822883|ref|XP_003784735.1| PREDICTED: pro-cathepsin H [Otolemur garnettii]
          Length = 308

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 120/204 (58%), Positives = 139/204 (68%), Gaps = 23/204 (11%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCA+ FNN GC GGLPSQ
Sbjct: 125 VSPVKNQGSCGSCWTFSTTGALESAVAIAGGKMLSLAEQQLVDCAKDFNNHGCQGGLPSQ 184

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN G+  E+ YPY GK                         E+ +  AV L  P
Sbjct: 185 AFEYILYNKGIMGEDTYPYQGKYD-----------------------EEAMVEAVALYNP 221

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           VS AFEV D F  YK G+YSST C  TP  VNHAV+AVGYG E+GVPYW++KNSWG  WG
Sbjct: 222 VSFAFEVTDDFLMYKRGIYSSTSCHKTPDKVNHAVLAVGYGEENGVPYWIVKNSWGSQWG 281

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
             GYF +E GKNMCG+A CASYP+
Sbjct: 282 MDGYFLIERGKNMCGLAACASYPI 305


>gi|28974202|gb|AAO61485.1| cathepsin H [Sterkiella histriomuscorum]
          Length = 366

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 121/206 (58%), Positives = 148/206 (71%), Gaps = 5/206 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFST G +E+ Y   +G   +LSEQQLVDCA  ++N GC+GGLPS 
Sbjct: 147 VSPVKNQGKCGSCWTFSTVGCVESHYLLKYGAFRNLSEQQLVDCAGDYDNHGCSGGLPSH 206

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSS--ENVGVQVLDSVNITLGAEDELQHAVGLV 226
           AFEYIK NGGL  E  YPY   +G C      ++VG++   +VNI+L  ED+L+ A+ L 
Sbjct: 207 AFEYIKDNGGLALETTYPYKAANGQCSIQKGQQSVGIRG-GAVNISLN-EDDLKQAIYLH 264

Query: 227 RPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGE 285
            PVSVAF V+DGFR YKSGVY+   C N P DVNHAV+AVG+G  E+ V YW+IKNSWG 
Sbjct: 265 GPVSVAFRVIDGFRDYKSGVYAVEGCANGPNDVNHAVLAVGFGTDENKVDYWIIKNSWGA 324

Query: 286 NWGDHGYFKMEMGKNMCGIATCASYP 311
            WGD G+FKM+ G NMCGI  C SYP
Sbjct: 325 AWGDQGFFKMKRGVNMCGIQNCNSYP 350


>gi|118366977|ref|XP_001016704.1| Cysteine proteinase 3 precursor, putative [Tetrahymena thermophila]
 gi|89298471|gb|EAR96459.1| Cysteine proteinase 3 precursor, putative [Tetrahymena thermophila
           SB210]
          Length = 343

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 129/291 (44%), Positives = 182/291 (62%), Gaps = 22/291 (7%)

Query: 38  SSDGLRDFETSVLQVIGQARHALSFAR-FARRYGKI-YESVEEMKLR------FATFSKN 89
           SS+  + F+  ++ +I   +H L+  + + ++  K  + + EE+ +        AT  +N
Sbjct: 54  SSERFKIFKQRLIDII---KHNLNPHKTYTQKINKFSFYTQEELSVLNAAQNCSATAKEN 110

Query: 90  LDLIRSTNCKGL----SYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG---I 142
           +   +  N K +     +R    ++PVK+QG CGSCWTFSTTG+LE+  H A   G   +
Sbjct: 111 MAPKKKYNLKDIPEFVDWRTKGIVTPVKNQGQCGSCWTFSTTGALES--HWALHTGNAPL 168

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
            LSEQQL+DCA  FNN GC+GGLPSQAFEYI Y GGLDTE  YPY   D  C+F   +  
Sbjct: 169 LLSEQQLIDCAGDFNNFGCSGGLPSQAFEYISYAGGLDTEGDYPYEATDNECEFKRSHAA 228

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
            +V+ S NIT   EDEL + +    P+S+A++V D F  Y  G+YS+  C  +P  VNHA
Sbjct: 229 AKVVRSFNITFQDEDELIYHLATAGPISIAYQVTDDFFKYDGGIYSNPYCSTSPDMVNHA 288

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           V+AVGY +     Y+++KNSWGE+WG+ GYF +E+G NMCG+A CASYP+V
Sbjct: 289 VLAVGYNLTG--RYYIVKNSWGEHWGNEGYFNIELGSNMCGLADCASYPIV 337


>gi|108755401|emb|CAI77919.1| cathepsin H [Guillardia theta]
 gi|122890320|emb|CAJ73711.1| Cathepsin H [Guillardia theta]
          Length = 353

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 120/217 (55%), Positives = 142/217 (65%), Gaps = 11/217 (5%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +S VK+QG CGSCWTFST  +LE+ +    G+ + LSEQQLVDCA  F N GCNGGLPSQ
Sbjct: 135 VSMVKNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQQLVDCAADFKNNGCNGGLPSQ 194

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFS-----------SENVGVQVLDSVNITLGAED 217
           AFEYI YNGGL   E YPY   DG C  +             +VG +V    N T G E 
Sbjct: 195 AFEYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKPWSVGAKVSKVANFTPGDEI 254

Query: 218 ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
            ++  VG   P+SVAFEVV   R Y SGVYSS  C  TP  VNHAV+AVGYG E G+PYW
Sbjct: 255 SMKTVVGSHNPISVAFEVVADLRHYSSGVYSSPTCVGTPDKVNHAVLAVGYGTEGGIPYW 314

Query: 278 LIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
            IKNSWG  WGD+GYFK++ G N CGI+ CAS+P+ +
Sbjct: 315 TIKNSWGFAWGDNGYFKIQRGSNKCGISVCASFPITS 351


>gi|428175797|gb|EKX44685.1| hypothetical protein GUITHDRAFT_71985 [Guillardia theta CCMP2712]
          Length = 354

 Score =  241 bits (614), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/218 (55%), Positives = 144/218 (66%), Gaps = 12/218 (5%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +S VK+QG CGSCWTFST  +LE+ +    G+ + LSEQQLVDCA  F N GCNGGLPSQ
Sbjct: 135 VSMVKNQGTCGSCWTFSTAAALESLHAIKTGEMVLLSEQQLVDCAADFKNNGCNGGLPSQ 194

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFS-----------SENVGVQVLDSV-NITLGAE 216
           AFEYI YNGGL   E YPY   DG C  +             +VG + +  V N T G E
Sbjct: 195 AFEYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKPWSVGAKKVSKVANFTPGDE 254

Query: 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
             ++  VG   P+SVAFEVV   R Y SGVYSS  C  TP  VNHAV+AVGYG E G+PY
Sbjct: 255 ISMKTVVGSHNPISVAFEVVADLRHYSSGVYSSPTCVGTPDKVNHAVLAVGYGTEGGIPY 314

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           W IKNSWG  WGD+GYFK++ G NMCGI+ CAS+P+ +
Sbjct: 315 WTIKNSWGFAWGDNGYFKIQRGSNMCGISVCASFPITS 352


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 170/306 (55%), Gaps = 59/306 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKGL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  FS+N  L+   N    +GL SY+LG+N            
Sbjct: 30  FKATHKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGDLLPHEFAR 89

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  ++PVK+QG CGSCW FSTTGS
Sbjct: 90  MFNGYRGARTAGRGSTFLPPANVNYSSLPQSMDWREKGAVTPVKNQGQCGSCWAFSTTGS 149

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE  +    G  +SLSEQ LVDC++ F N GC GGL   AF+YIK NGG+DTE++YPY  
Sbjct: 150 LEGQHFLKTGVLVSLSEQNLVDCSETFGNHGCEGGLMDNAFQYIKANGGIDTEKSYPYEA 209

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYS 248
           +DG C+F  +NVG      V+I  G+ED+L+ AV  V PVSVA +     F+ Y  GVY 
Sbjct: 210 EDGECRFKKQNVGATDTGFVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYD 269

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
            T+C +  +D  H V+ VGYGVEDG  YWL+KNSW E+WGD+GY KM   K N CGIA+ 
Sbjct: 270 ETECSSEQLD--HGVLVVGYGVEDGKKYWLVKNSWAESWGDNGYIKMSRDKDNQCGIASA 327

Query: 308 ASYPVV 313
           ASYP+V
Sbjct: 328 ASYPLV 333


>gi|291224892|ref|XP_002732436.1| PREDICTED: cathepsin H-like [Saccoglossus kowalevskii]
          Length = 302

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 117/206 (56%), Positives = 141/206 (68%), Gaps = 1/206 (0%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK QG CGSCW+FSTTG+LE+A   A    ISLSEQQL+DCAQAFNN GCNGGLP+Q
Sbjct: 95  VTDVKSQGSCGSCWSFSTTGALESATAIAKSTLISLSEQQLIDCAQAFNNHGCNGGLPAQ 154

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI YN GL  +  Y Y  KDG CK+        V   VNIT G ED + +AV    P
Sbjct: 155 AFEYIHYNDGLMADIDYQYKAKDGKCKYDPSKAAAFVSKIVNITKGDEDGILNAVYKHGP 214

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENW 287
           VS+A++V   F  Y SGVYSST C   P  VNHAV+A G+    +G+ YW++KNSWG +W
Sbjct: 215 VSIAYDVASDFHLYHSGVYSSTVCKIDPEHVNHAVLATGFNETAEGLKYWMVKNSWGPDW 274

Query: 288 GDHGYFKMEMGKNMCGIATCASYPVV 313
           G  GYF +E  KNMCG+A CASYP+V
Sbjct: 275 GLDGYFWIERNKNMCGLADCASYPIV 300


>gi|403355691|gb|EJY77431.1| Cathepsin H [Oxytricha trifallax]
          Length = 363

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/206 (56%), Positives = 151/206 (73%), Gaps = 5/206 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVK+QG CGSCWTFST G+LE+ +   +G+  +LSEQQLVDCA  ++N GCNGGLPS 
Sbjct: 147 VSPVKNQGKCGSCWTFSTVGALESHFLLKYGQFRNLSEQQLVDCAGNYDNHGCNGGLPSH 206

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLV 226
           AFEY+K NGG+  E +YPY      C  K  S++VGV+   +VN++L +ED+L+ A+   
Sbjct: 207 AFEYLKDNGGIAEETSYPYVAVTNTCALKKGSQSVGVKG-GAVNVSL-SEDDLKQAIYSH 264

Query: 227 RPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGE 285
            PVS+AF+V   FR Y++GVY+S  C N P DVNHAV+AVG+G  E+ V YW+IKNSWG 
Sbjct: 265 GPVSIAFQVASDFRDYRAGVYTSKVCKNGPQDVNHAVLAVGFGTDENKVDYWIIKNSWGA 324

Query: 286 NWGDHGYFKMEMGKNMCGIATCASYP 311
            WGD GYFKME G NMCG++ C SYP
Sbjct: 325 VWGDQGYFKMERGVNMCGVSNCNSYP 350


>gi|156046107|gb|ABU42573.1| cathepsin H variant 2 [Sus scrofa]
          Length = 321

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/301 (43%), Positives = 164/301 (54%), Gaps = 63/301 (20%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L F  +  ++ K Y S+EE   R   F  N   I + N    +++LGLN           
Sbjct: 33  LHFKSWMVQHQKKY-SLEEYHHRLQVFVSNWRKIDAHNAGNHTFKLGLNQFSDMSFDEIR 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCWTFSTTG+LE
Sbjct: 92  HKYLWSEPQNCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           +A   A GK +SL+EQQLVDCAQ F              EYI+YN G+  E+ YPY G+D
Sbjct: 152 SAVAIATGKMLSLAEQQLVDCAQNF--------------EYIRYNKGIMGEDTYPYKGQD 197

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTK 251
             CKF  +     V D  NIT+  E+ +  AV L  PVS AFEV + F  Y+ G+YSST 
Sbjct: 198 DHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTS 257

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP
Sbjct: 258 CHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYP 317

Query: 312 V 312
           +
Sbjct: 318 I 318


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/306 (43%), Positives = 170/306 (55%), Gaps = 59/306 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F  ++ K Y S  E  LRF  F++N  L+   N K   GL SY+L +N            
Sbjct: 30  FKSQHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLAMNKFGDLLPHEFAK 89

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  ++PVK+QG CGSCW FSTTGS
Sbjct: 90  MVNGYRGKQNKEQRPTFIPPANLNDSSLPTTVDWRKKGAVTPVKNQGQCGSCWAFSTTGS 149

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE  + +  GK +SLSEQ LVDC+  F NQGCNGGL    F+YIK NGG+DTEE++PYT 
Sbjct: 150 LEGQHFRKTGKLVSLSEQNLVDCSDDFGNQGCNGGLMDNGFQYIKANGGIDTEESHPYTA 209

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYS 248
           +DG CKF   +VG      V+I  G+ED+L+ AV  V PVSVA +   G F+ Y  GVY 
Sbjct: 210 QDGDCKFKKADVGATDAGFVDIQQGSEDDLKKAVATVGPVSVAIDASHGSFQLYSQGVYD 269

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
              C ++ +D  H V+ VGYGV++G  YWL+KNSWG +WGD+GY  M   K N CGIA+ 
Sbjct: 270 EPDCSSSQLD--HGVLTVGYGVKNGKKYWLVKNSWGGDWGDNGYILMSRDKDNQCGIASS 327

Query: 308 ASYPVV 313
           ASYP+V
Sbjct: 328 ASYPLV 333


>gi|391328503|ref|XP_003738728.1| PREDICTED: digestive cysteine proteinase 3-like [Metaseiulus
           occidentalis]
          Length = 506

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/217 (55%), Positives = 142/217 (65%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           KG  Y L   ++PVKDQG CGSCW FSTTGSLE  + +A GK +SLSEQ LVDC+    N
Sbjct: 292 KGKDYWLEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGDEGN 351

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL  Q F YIK NGG+DTEE+YPY  +DG C F S  VG +V   V+I  G+E  
Sbjct: 352 NGCEGGLMDQGFTYIKNNGGIDTEESYPYNAEDGDCAFKSNAVGARVTGFVDIDSGSEKA 411

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           LQ AV  V PVSVA +   D F+ YK G+Y    C +T +D  H V+AVGYG E+GV YW
Sbjct: 412 LQKAVATVGPVSVAIDASNDSFQLYKEGIYDEPACSSTQLD--HGVLAVGYGSENGVDYW 469

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSW   WG  GY KM   K N CGIA+ ASYP V
Sbjct: 470 LVKNSWNTVWGQDGYIKMARNKDNQCGIASQASYPTV 506



 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 116/181 (64%), Gaps = 5/181 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + YR   +++PVK+QG CGSCW FS TGSLE       G  +SLSEQ L+DC++   N
Sbjct: 122 KKVDYRKSGHVTPVKNQGLCGSCWAFSATGSLEGQLSIQNGTLVSLSEQNLLDCSR--EN 179

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGC+GG   +AFEYIK NGG+DTEE+YPYTG+ G C F  +N+G +V   V++    E  
Sbjct: 180 QGCDGGYMDKAFEYIKKNGGIDTEESYPYTGRKGKCMFKKKNIGARVTGHVDVPAEDEQA 239

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  + P+SV  +   D FRFYK G+Y  + C  + +D  H V+ VGYG E G  YW
Sbjct: 240 LKLAVAKIGPISVGIDASKDSFRFYKEGIYDESSCSTSQLD--HGVLVVGYGSEKGKDYW 297

Query: 278 L 278
           L
Sbjct: 298 L 298


>gi|375152052|gb|AFA36484.1| cysteine protease, partial [Lolium perenne]
          Length = 142

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 107/141 (75%), Positives = 124/141 (87%)

Query: 174 KYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233
           +YNGG+DTEE+YPY G +GVCK+  EN  VQV DSVNITL AEDEL++AV LVRPVSVAF
Sbjct: 1   RYNGGIDTEESYPYKGVNGVCKYRPENAAVQVADSVNITLNAEDELKNAVELVRPVSVAF 60

Query: 234 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYF 293
           EV+DGF+ YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSWG +WG+ GYF
Sbjct: 61  EVIDGFKQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGEDGYF 120

Query: 294 KMEMGKNMCGIATCASYPVVA 314
           KMEMGKNMC +ATCASYP++A
Sbjct: 121 KMEMGKNMCAVATCASYPILA 141


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  234 bits (597), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 153/238 (64%), Gaps = 4/238 (1%)

Query: 78  EMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQA 137
           E K R +TF    ++  S+  K + +R    ++PVKDQG CGSCW FS TGSLE  +   
Sbjct: 77  ERKGRGSTFLPPANVNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLK 136

Query: 138 FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 197
            GK +SLSEQ L+DC+ +F N+GC GGL   AF+YIK N G+DTEE+YPY   DG C+F 
Sbjct: 137 SGKLVSLSEQNLIDCSGSFGNEGCGGGLMDNAFKYIKANDGIDTEESYPYEAMDGDCRFK 196

Query: 198 SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTP 256
            E+VG      V+I  G+ED+LQ AV  V P+SVA +     F+ Y  GVY    C +  
Sbjct: 197 KEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVAIDASHSSFQLYSEGVYDEPNCSSEE 256

Query: 257 MDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +D  H V+AVGYGV++G  YWL+KNSW E WGD+GY  M   K N CGIA+ ASYP+V
Sbjct: 257 LD--HGVLAVGYGVKNGKKYWLVKNSWAETWGDNGYILMSRDKDNQCGIASSASYPLV 312


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 173/311 (55%), Gaps = 56/311 (18%)

Query: 53  IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---- 108
           + Q R   ++  F   +GK Y   EE  LR A ++ NL++++  N +  SY+L +N    
Sbjct: 21  LSQDRQWHAWKDF---HGKTYTG-EEEDLRRAIWNDNLEIVKKHNAENHSYKLDMNHFAD 76

Query: 109 --------------------------------------------ISPVKDQGHCGSCWTF 124
                                                       ++ VK+QG CGSCW F
Sbjct: 77  LTVTEFKQRFMGYRAASNSTGGSTFLPLSNVQLPAEVDWRDKGFVTAVKNQGQCGSCWAF 136

Query: 125 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184
           S+TGSLE  + +  GK +SLSEQ LVDC++ + N GC GGL   AF+YIK N G+DTE++
Sbjct: 137 SSTGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNNGCEGGLMDYAFKYIKNNDGIDTEQS 196

Query: 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYK 243
           YPYT +DG C F   +VG  V    ++  G+E +LQ AV  V P+SVA +     F+ YK
Sbjct: 197 YPYTARDGQCHFKPGSVGATVTGYTDVQRGSEGDLQSAVATVGPISVAIDAGHSSFQLYK 256

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMC 302
           +GVYS   C +T +D  H V+AVGYG EDG  YWL+KNSWGE WG +GY KM   K N C
Sbjct: 257 TGVYSEPDCSSTQLD--HGVLAVGYGAEDGKDYWLVKNSWGEGWGMNGYIKMSRNKDNQC 314

Query: 303 GIATCASYPVV 313
           GIAT ASYP+V
Sbjct: 315 GIATQASYPLV 325


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  233 bits (595), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 126/305 (41%), Positives = 164/305 (53%), Gaps = 55/305 (18%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  +   +G  Y +V E   R   +  NLD I   N +G SY+L +N             
Sbjct: 22  FDSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEGHSYKLAVNKFADLTYPEFAAK 81

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++P+KDQG CGSCW+FSTTGS+
Sbjct: 82  YLGLRFDATNATKSFAASTYLPRMVSLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSV 141

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  + +  G+ +SLSEQ LVDC+ A  N GCNGGL  QAF+YI  N G+DTE +YPYT +
Sbjct: 142 EGQHARKTGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNGIDTESSYPYTAQ 201

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSS 249
           DG C+F+S NVG  V    +I  G+E +LQ+AV  V P+SVA +     F+FY SGVY+ 
Sbjct: 202 DGTCQFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYNE 261

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCA 308
             C ++ +D  H V+AVGYG      YWL+KNSWG +WG  GY  M     N CGIAT A
Sbjct: 262 PACSSSQLD--HGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQCGIATAA 319

Query: 309 SYPVV 313
           SYP+V
Sbjct: 320 SYPLV 324


>gi|323452413|gb|EGB08287.1| hypothetical protein AURANDRAFT_3602, partial [Aureococcus
           anophagefferens]
          Length = 312

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/312 (43%), Positives = 165/312 (52%), Gaps = 61/312 (19%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SF  + + +GK Y S        A F  +   + + N + LS+R GLN            
Sbjct: 1   SFDAYVQHFGKTYASDAHRDAASAHFEASKRRVAAHNARALSWRAGLNQFSDMSDDEFEA 60

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEA-- 132
                                             +S VK+QGHCGSCWTFST G+LEA  
Sbjct: 61  AVLMDPQECSATGGVGAGAAADLPDALDWRSRGVVSEVKNQGHCGSCWTFSTVGALEAHL 120

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
           A  Q   +   LSEQQLVDCA AF+ +GC GGLPS AFEY+KY GGL TE +YPY G D 
Sbjct: 121 ALKQDAWRAPRLSEQQLVDCAGAFDTKGCAGGLPSHAFEYVKYAGGLSTEFSYPYRGVDQ 180

Query: 193 VCKF-----------SSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRF 241
            C F           S+    V    SVNIT G E  L++ +    PVSVAF+V   FR 
Sbjct: 181 ACAFNATASSSGLPTSAGVGVVVPGGSVNITKGDEASLKYHLATKGPVSVAFQVASDFRD 240

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGK 299
           Y SGVYSST C N  MDVNHAV+AVGYG +    + YW IKNSW  +WGD G+FKME   
Sbjct: 241 YASGVYSSTVCKNGAMDVNHAVLAVGYGTDPVSNMTYWTIKNSWDYSWGDEGFFKMESFV 300

Query: 300 NMCGIATCASYP 311
           NMCG+A C +YP
Sbjct: 301 NMCGVANCNAYP 312


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/234 (50%), Positives = 151/234 (64%), Gaps = 4/234 (1%)

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
           R +T+    +L  S+  K + +R    ++PVKDQG CGSCW FS+TGSLE  +    GK 
Sbjct: 102 RGSTYLPPANLNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFSSTGSLEGQHFLKTGKL 161

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           +SLSEQ LVDC+ A+ NQGCNGGL   +F YIK NGG+DTE++YPY  +DG C++  E+V
Sbjct: 162 VSLSEQNLVDCSSAYGNQGCNGGLMDNSFNYIKANGGIDTEDSYPYEAEDGDCRYKKEDV 221

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVN 260
           G      V+I  G+E +LQ AV  V PVSVA +     F+ Y  GVY    C +  +D  
Sbjct: 222 GATDTGFVDIKEGSEKDLQKAVATVGPVSVAIDASQQSFQLYSEGVYDEPNCSSESLD-- 279

Query: 261 HAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           H V+AVGYGV++G  YWL+KNSW E WG  GY  M   K N CGIA+ ASYP+V
Sbjct: 280 HGVLAVGYGVKNGKKYWLVKNSWAETWGQDGYILMSRDKNNQCGIASSASYPLV 333


>gi|261289785|ref|XP_002611754.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
 gi|229297126|gb|EEN67764.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
          Length = 327

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/327 (41%), Positives = 168/327 (51%), Gaps = 60/327 (18%)

Query: 45  FETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL--- 101
           F   VL V       + +  F   +GK Y+S +E  +R A F  N  +I+  N +     
Sbjct: 3   FLILVLSVTMATAMDVEWEAFKLTHGKQYKSPDEENVRRAIFRDNNQMIKEHNQEAAMGR 62

Query: 102 -SYRLGLN---------------------------------------------------I 109
            SY +G+N                                                   +
Sbjct: 63  RSYFMGMNQFGDLAHSEYLELVVGPGLLPLNLSTPSENVFESTPGLQVDDTVDWRQKGAV 122

Query: 110 SPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQA 169
           +P+KDQGHCGSCW FSTTGSLE  +    GK +SLSEQ L+DC++ F N+GC GGL  QA
Sbjct: 123 TPIKDQGHCGSCWAFSTTGSLEGQHFMKTGKLVSLSEQNLLDCSRRFGNKGCEGGLMDQA 182

Query: 170 FEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           F YIK NGG+DTEE YPY  KD  VC + +   G  +    +I    E  L  AVG V P
Sbjct: 183 FRYIKSNGGIDTEECYPYMAKDEKVCDYKTSCSGATLSSYTDIKAMDEMALMQAVGTVGP 242

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +      RFYKSG+Y   +C  T +D  H V+AVGYG  DG+ YWL+KNSWG  W
Sbjct: 243 VSVAIDASHKSLRFYKSGIYDEPECSRTKLD--HGVLAVGYGSMDGMDYWLVKNSWGSAW 300

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   K N CGIAT ASYPVV
Sbjct: 301 GDMGYVKMTRNKNNQCGIATKASYPVV 327


>gi|308322281|gb|ADO28278.1| cathepsin L [Ictalurus furcatus]
          Length = 359

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 170/312 (54%), Gaps = 60/312 (19%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN------- 108
           + F  + +++GKIY+SVEE   R  T+ +N  L+ + N    KG+ SYRLG+N       
Sbjct: 23  IEFQEWKQKFGKIYKSVEEESQRKKTWQENHKLVMNHNILADKGIKSYRLGMNYFADMSN 82

Query: 109 ---------------------------------------------ISPVKDQGHCGSCWT 123
                                                        ++ V++Q  C SCW 
Sbjct: 83  QEYRQSVFKGCLSFNRTLNHSAATFLRQVGGPALPNTVNWTQMGYVTEVEEQKQCNSCWA 142

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FS TG+LE    +  GK +SLS+QQLVDC++ F N GC GGL + AFEY+K NGGL TEE
Sbjct: 143 FSATGALEGQTFKKTGKLVSLSKQQLVDCSKKFGNNGCKGGLMNWAFEYVKENGGLHTEE 202

Query: 184 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFY 242
           +YPY  KDG C+ +   VGV     V I    E+ LQ AV  + P+SVA +     F+ Y
Sbjct: 203 SYPYEAKDGSCRDNLGTVGVTCTGHVQINSEDENALQEAVATIGPISVAIDANHTSFQLY 262

Query: 243 KSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NM 301
           +SG+Y    C  T  D+NH V+AVGYG +DG  YWLIKNSWG NWGD GY KM   K N 
Sbjct: 263 ESGLYDEPDCSCT--DMNHGVLAVGYGTDDGKDYWLIKNSWGINWGDKGYIKMSRNKNNQ 320

Query: 302 CGIATCASYPVV 313
           CGIAT ASYP+V
Sbjct: 321 CGIATAASYPLV 332


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 164/310 (52%), Gaps = 50/310 (16%)

Query: 52  VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--- 108
           +I +     S+ R+   + K Y    E  +R+  +  N   IR  N +G  + L +N   
Sbjct: 17  IIERPTEDDSWIRWKMAHNKAYSHDGEETVRYTIWKDNERRIREHNLQGGDFLLEMNQFG 76

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      ++PVKDQG CGSCW FS
Sbjct: 77  DMTNNEFKDFNGYLSHKHVSGSTFLTPNSFVAPDSVDWRNEGYVTPVKDQGQCGSCWAFS 136

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
           TTGSLE    +  GK +SLSEQ LVDC+ A+ N GCNGGL   AF YIK N G+D+E +Y
Sbjct: 137 TTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENNGIDSEASY 196

Query: 186 PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKS 244
           PYT KDG C F+  NV       V+I  G E++L+ AV  V P+SVA +     F+FY+ 
Sbjct: 197 PYTAKDGKCAFTKPNVAATDTGFVDIPSGDENKLKEAVASVGPISVAIDASHFSFQFYRK 256

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCG 303
           GVY+  KC +T +D  H V+ VGYG E G  YWL+KNSW  +WGD GY KM    KN CG
Sbjct: 257 GVYNERKCSSTELD--HGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCG 314

Query: 304 IATCASYPVV 313
           IAT ASYP+V
Sbjct: 315 IATNASYPLV 324


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 115/207 (55%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FSTTGSLE  + +A GK +SLSEQ LVDC++   N GCNGGL   
Sbjct: 119 VTPVKNQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSRVEGNNGCNGGLMDN 178

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
            F YI+ NGG+DTEE+YPYTGKDG C F+  +VG +V   V++    E  LQ AV  V P
Sbjct: 179 GFTYIQQNGGIDTEESYPYTGKDGDCAFNENSVGARVKGFVDVPQRDEAALQAAVASVGP 238

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +   D F++YK GVY    C  + +D  H V+ VGYG E+GV YWL+KNSWG  W
Sbjct: 239 VSVAIDASNDSFQYYKEGVYDEPSCSFSQLD--HGVLVVGYGTENGVDYWLVKNSWGPTW 296

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY KM   K N CGIA+ ASYP V
Sbjct: 297 GQDGYIKMMRNKENQCGIASMASYPTV 323


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 171/327 (52%), Gaps = 57/327 (17%)

Query: 42  LRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL 101
           ++ F    L  +     A+ FA +   + + Y S +E  LR   +  NL+LI   N  G 
Sbjct: 1   MKAFTAVALLALVACATAMPFAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGR 60

Query: 102 -SYRLGLN---------------------------------------------------I 109
            SY LG+N                                                   +
Sbjct: 61  HSYTLGMNEFGDLAHHEFAAKYLGVRFNGVNATKSFASSTYLPRMVSLPDSVDWRTAGIV 120

Query: 110 SPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQA 169
           +PVK+QG CGSCW+FSTTGS+E  + +  G  +SLSEQ LVDC+    N+GCNGGL   A
Sbjct: 121 TPVKNQGQCGSCWSFSTTGSVEGQHARKTGTLVSLSEQNLVDCSSQEGNEGCNGGLMDDA 180

Query: 170 FEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPV 229
           FEYI  NGG+DTE +YPYT   G CKF++ N+G  V    +I  G+E +LQ+AV  V PV
Sbjct: 181 FEYIIKNGGIDTEASYPYTATTGTCKFNAANIGATVASYQDIITGSESDLQNAVATVGPV 240

Query: 230 SVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENW 287
           SVA +     F+FY +GVY+  KC  T +D  H V+AVGYG   +G  YWL+KNSWG  W
Sbjct: 241 SVAIDASHINFQFYFTGVYNEKKCSTTQLD--HGVLAVGYGTSTEGKDYWLVKNSWGATW 298

Query: 288 GDHGYFKMEM-GKNMCGIATCASYPVV 313
           G  GY  M     N CGIAT ASYP+V
Sbjct: 299 GKAGYIWMSRNADNQCGIATSASYPLV 325


>gi|340380715|ref|XP_003388867.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 347

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 115/255 (45%), Positives = 150/255 (58%), Gaps = 3/255 (1%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L+FA F R Y  +  S +  +     F   +      +   + +R    I+PV+DQG CG
Sbjct: 95  LTFAEFKRIY--LSSSSQHCRATTGNFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCG 152

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FS T  L A      G+ ISLS+QQL+DC+++FNN+GC GGLPSQAFEYI+YNGG+
Sbjct: 153 SCWAFSATSCLSAHLALKTGQLISLSKQQLLDCSRSFNNRGCKGGLPSQAFEYIRYNGGI 212

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF 239
           ++E  YPY  ++  C F    V   V   VN T GAED++  A+  + PVS+       F
Sbjct: 213 ESERDYPYKDREEKCHFKPSLVAATVTGVVNFTQGAEDDIAVALANIGPVSIGIHSTKSF 272

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
             YK G+Y    C   P  +NHAV+ VGY     G  YW+ KNSWG NWG +GYF +  G
Sbjct: 273 ATYKKGIYQGKLCSKNPRKINHAVLIVGYDQTASGEKYWIGKNSWGTNWGMNGYFWIRRG 332

Query: 299 KNMCGIATCASYPVV 313
            N CG+ATCASYPVV
Sbjct: 333 HNACGLATCASYPVV 347


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 167/306 (54%), Gaps = 56/306 (18%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN--------- 108
           + +F  RYGK Y S +E   R + + +N + I S N +   GL S+ L +N         
Sbjct: 22  WQQFKARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDMTTEE 81

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  ++PVKDQ  CGSCW FS TGS
Sbjct: 82  INAAMNGFLSAGKKVPRGTMYQPLVDELPDTVDWRDKGAVTPVKDQKACGSCWAFSATGS 141

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE  +  + GK +SLSEQ LVDC+  + N GC GGL   AF YIK N G+DTEE+YPY  
Sbjct: 142 LEGQHFLSTGKLVSLSEQNLVDCSDKYGNFGCGGGLMDNAFRYIKDNNGIDTEESYPYEA 201

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYS 248
           K+G C+F+S+NVG  +   V+I  G+ED+LQ AV    PVSVA +     F FY  G+Y 
Sbjct: 202 KNGPCRFNSDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVSVAIDASTSTFHFYSRGIYY 261

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
             KC ++ +D  H V+AVGYG +D   YWL+KNSW E WGD GY KM   + N CGIA+ 
Sbjct: 262 DEKCSSSFLD--HGVLAVGYGTDDSSDYWLVKNSWNETWGDSGYIKMSRNRNNNCGIASQ 319

Query: 308 ASYPVV 313
           ASYPVV
Sbjct: 320 ASYPVV 325


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  230 bits (586), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/305 (42%), Positives = 166/305 (54%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K YES  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKSYESHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAK 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGYRGQRTSRGSTFMPPANVNDSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+D EE+YPY   
Sbjct: 150 EGQHFLKDGELVSLSEQNLVDCSQSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAM 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSS 249
           D  C+F  E+VG      V+I  G+ED+L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DDKCRFKKEDVGATDTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
            +C +  +D  H V+AVGYGV+DG  YWL+KNSWG +WGD+GY  M   K N CGIA+ A
Sbjct: 270 PECSSEELD--HGVLAVGYGVKDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIASAA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|118363827|ref|XP_001015137.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89296904|gb|EAR94892.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 429

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/210 (51%), Positives = 146/210 (69%), Gaps = 7/210 (3%)

Query: 109 ISPVKDQG----HCGSCWTFSTTGSLEAAYHQAFGKG-ISLSEQQLVDCAQAFNNQGCNG 163
           +S VKDQ      CGSCWTFS TG++E+      GK   +LS+QQLVDCA  F+NQGC+G
Sbjct: 134 VSSVKDQDAVGDDCGSCWTFSATGAIESHLALKTGKAPFNLSQQQLVDCAGKFDNQGCDG 193

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPS+AFEYI Y GG+++   YPY GKDG CKF  + V  +V  S NIT   E+EL + +
Sbjct: 194 GLPSRAFEYIAYAGGIESSRDYPYKGKDGKCKFKPQKVVAKVQSSFNITFQDENELIYHL 253

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
               PVS+A++V D F  Y+ G+YS+ +C   P +VNHAV+AVGY +     Y+++KNSW
Sbjct: 254 AKNGPVSIAYQVTDDFENYEGGIYSNPECSTDPQEVNHAVLAVGYNLTG--RYYIVKNSW 311

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           G++WG  GYF +E+G NMCG+A CASYP++
Sbjct: 312 GKDWGMDGYFYIELGSNMCGLADCASYPIL 341


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/279 (41%), Positives = 167/279 (59%), Gaps = 22/279 (7%)

Query: 41  GLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG 100
           G+ +F       + + R   S  R A+  G  + S E  KL                   
Sbjct: 110 GVNNFTDKTEYELRKLRGYRSACRIAKPKGSTFISSEHAKLP----------------DR 153

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS+TG++E  +++   + ++LSEQQL+DC++++ N G
Sbjct: 154 VDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNG 213

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG----VCKFSSENVGVQVLDSVNITLGAE 216
           C GGL   AF+Y++ N G+D+E +YPY   DG     C F+S N+  QV   +NI  G E
Sbjct: 214 CEGGLMDLAFQYVRDNKGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIHEGDE 273

Query: 217 DELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
             L +AV  + PVSVA    +  F  YKSG+YS  +C +   D++H V+ VGYG+EDG P
Sbjct: 274 RALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKP 333

Query: 276 YWLIKNSWGENWGDHGYFK-MEMGKNMCGIATCASYPVV 313
           YWLIKNSWGE+WGD GY K ++  KNMCG+A+ ASYP+V
Sbjct: 334 YWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/279 (41%), Positives = 167/279 (59%), Gaps = 22/279 (7%)

Query: 41  GLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG 100
           G+ +F       + + R   S  R A+  G  + S E  KL                   
Sbjct: 110 GVNNFTDKTEYELRKLRGYRSACRIAKPKGSTFISSEHAKLP----------------DR 153

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS+TG++E  +++   + ++LSEQQL+DC++++ N G
Sbjct: 154 VDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNG 213

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG----VCKFSSENVGVQVLDSVNITLGAE 216
           C GGL   AF+Y++ N G+D+E +YPY   DG     C F+S N+  QV   +NI  G E
Sbjct: 214 CEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGYINIHEGDE 273

Query: 217 DELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
             L +AV  + PVSVA    +  F  YKSG+YS  +C +   D++H V+ VGYG+EDG P
Sbjct: 274 RALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKP 333

Query: 276 YWLIKNSWGENWGDHGYFK-MEMGKNMCGIATCASYPVV 313
           YWLIKNSWGE+WGD GY K ++  KNMCG+A+ ASYP+V
Sbjct: 334 YWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372


>gi|118363825|ref|XP_001015136.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89296903|gb|EAR94891.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 355

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/343 (40%), Positives = 188/343 (54%), Gaps = 42/343 (12%)

Query: 8   VSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQAR------HALS 61
           + ++I L   A   SA  +   DSN   L+S  GL ++  + L  I Q+        +  
Sbjct: 1   MRNIIFLTLSALCLSAVVAQ--DSNQEILISR-GLVNYTDADLLSIYQSYGYEPDPSSER 57

Query: 62  FARFARRYGKIYE---------SVEEMKLRFATFSKNLDLIRSTNCKG------------ 100
           F  F  R  KI E         S +  KL F T S+      S NC              
Sbjct: 58  FQLFKSRLAKIIEHNSNPDKKYSQKINKLTFQTGSELKKFRASQNCSATAQANTRSFRKY 117

Query: 101 --------LSYRLGLNISPVKDQGH-CGSCWTFSTTGSLEAAYHQAFGKG-ISLSEQQLV 150
                   + +R    ++ VK+QG  CGSCW F+   +LE+ Y    GK  I  SEQQLV
Sbjct: 118 DLSQLPQYVDWREKGVVTQVKNQGEDCGSCWAFAAVAALESHYALKTGKKPIQFSEQQLV 177

Query: 151 DCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVN 210
           DCA+ F+ QGC+GGLPS+ FEY+ Y GG+ TE  YPY GKD  C+F+S     QV  S N
Sbjct: 178 DCARKFDTQGCDGGLPSKGFEYLAYAGGIQTEADYPYEGKDKKCRFNSSKAVAQVEKSFN 237

Query: 211 ITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV 270
           IT   E+EL + +    PV++A+EV D F  YK GV++S+ C   P DVNHAV+AVGY +
Sbjct: 238 ITFQDENELIYHLANYGPVAIAYEVNDDFDNYKDGVFTSSNCSTDPEDVNHAVLAVGYNM 297

Query: 271 EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
                Y+++KNSWG++WG +GYF +E+G NMCG+A CASYP++
Sbjct: 298 TG--KYFIVKNSWGKDWGMNGYFYIELGSNMCGLADCASYPII 338


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/305 (42%), Positives = 164/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FSTTGSL
Sbjct: 90  IFNGYHGSRKSGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G ED+L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 114/216 (52%), Positives = 143/216 (66%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW+FS TGSLE  + +  GK +SLSEQ LVDC++ F N G
Sbjct: 124 IDWRDKGAVTPVKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNG 183

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF YIK NGG+DTE+AYPY  +D  C +  +N G      V+I  G ED+LQ
Sbjct: 184 CNGGLMDNAFRYIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQ 243

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWL 278
            AV  V PVSVA +     F+ Y  GVY   +C  +P  ++H V+ VGYG E DG  YWL
Sbjct: 244 SAVATVGPVSVAIDASHQSFQLYSGGVYYEPEC--SPSQLDHGVLVVGYGTEDDGTDYWL 301

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG++WGD GY KM   + N CGIAT ASYP+V
Sbjct: 302 VKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/305 (41%), Positives = 164/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+ED+L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|323446652|gb|EGB02738.1| hypothetical protein AURANDRAFT_34950 [Aureococcus anophagefferens]
          Length = 235

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/226 (54%), Positives = 145/226 (64%), Gaps = 15/226 (6%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEA--AYHQAFGKGISLSEQQLVDCAQAFNN 158
           L +R    +S VK+QGHCGSCWTFST G+LEA  A  Q   +   LSEQQLVDCA AF+ 
Sbjct: 5   LDWRSRGVVSEVKNQGHCGSCWTFSTVGALEAHLALKQDAWRAPRLSEQQLVDCAGAFDT 64

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF-----------SSENVGVQVLD 207
           +GC GGLPS AFEY+KY GGL TE +YPY G D  C F           S+    V    
Sbjct: 65  KGCAGGLPSHAFEYVKYAGGLSTEFSYPYRGVDQACAFNATASSSGLPTSAGVGVVVPGG 124

Query: 208 SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           SVNIT G E  L++ +    PVSVAF+V   FR Y SGVYSST C N  MDVNHAV+AVG
Sbjct: 125 SVNITKGDEAALKYHLATKGPVSVAFQVASDFRDYASGVYSSTVCKNGAMDVNHAVLAVG 184

Query: 268 YGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
           YG +    + YW IKNSW  +WGD G+FKME   NMCG+A C +YP
Sbjct: 185 YGTDPVSNMTYWTIKNSWDYSWGDEGFFKMESFVNMCGVANCNAYP 230


>gi|229595078|ref|XP_001020175.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|225566400|gb|EAR99930.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 375

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/342 (40%), Positives = 187/342 (54%), Gaps = 42/342 (12%)

Query: 8   VSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQAR------HALS 61
           + ++I L   A   SA  +   DSN   L+S  GL D+  + L  I Q+        +  
Sbjct: 1   MRNIIFLTLSALCLSAVIAQ--DSNQEILISR-GLVDYTDADLLSIYQSYGYEPDPSSER 57

Query: 62  FARFARRYGKIYE---------SVEEMKLRFATFSKNLDLIRSTNCKG------------ 100
           F  F  R  KI E         S +  KL F T S+      S NC              
Sbjct: 58  FQLFKSRLAKIIEHNSNPDKKYSQKINKLTFQTGSELKKFRASQNCSATAQANTRSFRKY 117

Query: 101 --------LSYRLGLNISPVKDQGH-CGSCWTFSTTGSLEAAYHQAFGKG-ISLSEQQLV 150
                   + +R    ++ VK+QG  CGSCW F+   +LE+ Y    GK  I  SEQQLV
Sbjct: 118 DLSQLPQYVDWREKGVVTQVKNQGEDCGSCWAFAAVAALESHYALKTGKKPIQFSEQQLV 177

Query: 151 DCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVN 210
           DCA+ F+ QGC+GGLPS+ FEY+ Y GG+ TE  YPY GKD  C+F+S     QV  S N
Sbjct: 178 DCARKFDTQGCDGGLPSKGFEYLAYAGGIQTEADYPYEGKDKKCRFNSSKAVAQVEKSFN 237

Query: 211 ITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV 270
           IT   E+EL + +    PV++A+EV D F  Y+ GV++S+ C   P DVNHAV+AVGY +
Sbjct: 238 ITFQDENELIYHLANYGPVAIAYEVNDDFDNYEDGVFTSSNCSTDPEDVNHAVLAVGYNM 297

Query: 271 EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
                Y+++KNSWG++WG +GYF +E+G NMCG+A CASYP+
Sbjct: 298 TG--KYFIVKNSWGKDWGMNGYFYIELGSNMCGLADCASYPI 337


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/305 (41%), Positives = 164/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHHGTRKTGGSTFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGRHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+ED+L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|348542774|ref|XP_003458859.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 330

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 112/207 (54%), Positives = 143/207 (69%), Gaps = 5/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FS TG+LE  Y +  GK +SLSEQQLVDC++ F N GC GG P  
Sbjct: 127 VTHVKDQKECGSCWAFSATGALEGQYFKKTGKLVSLSEQQLVDCSRKFRNNGCEGGEPHW 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+YNGGLDTEE+Y Y  KDG C ++ ++VG +    VN++   ED L+ AV  + P
Sbjct: 187 AFQYIRYNGGLDTEESYHYEAKDGQCHYNPDSVGAKCSGYVNVS-PFEDALKEAVATIGP 245

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA ++    F+ Y SGVY    C N  +++NHAV+AVGYG E+G  YWL+KNSWG  W
Sbjct: 246 ISVAIDISRVSFQLYHSGVYDEPWCSN--INLNHAVLAVGYGTENGHDYWLVKNSWGSEW 303

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY KM   K N CGIAT ASYP+V
Sbjct: 304 GNKGYIKMTRNKDNQCGIATEASYPLV 330


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 162/301 (53%), Gaps = 50/301 (16%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           S+ ++   + K+Y    E  +R+  +  N   IR  N KG  + L +N            
Sbjct: 26  SWIQWKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFLLKMNQFGDMTNSEFKA 85

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             ++PVKDQG CGSCW FSTTGSLE  +
Sbjct: 86  FNGYLSHKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQH 145

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
            +  GK +SLSEQ LVDC+ A+ N GCNGGL   AF YIK N G+D+E +YPYT +DG C
Sbjct: 146 FKKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENKGIDSEASYPYTAEDGKC 205

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCG 253
            F   +V       V++  G E++L+ AV  V P+SVA +   + F+FY SGVY+   C 
Sbjct: 206 VFKKPSVAATDTGFVDLPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCS 265

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYPV 312
           +T +D  H V+ VGYG E G  YWL+KNSW  +WGD GY KM    KN CGIAT ASYP+
Sbjct: 266 STELD--HGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPL 323

Query: 313 V 313
           V
Sbjct: 324 V 324


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/232 (48%), Positives = 148/232 (63%), Gaps = 4/232 (1%)

Query: 84  ATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 143
           +TF    ++  S+  K + +R    ++PVKDQG CGSCW FS TGSLE  +    G+ +S
Sbjct: 103 STFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVS 162

Query: 144 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV 203
           LSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   DG C+F  E+VG 
Sbjct: 163 LSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGECRFKKEDVGA 222

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHA 262
                V I  G+ED+L+ AV  V P+SVA +     F+ Y  GVY   +C  +  D++H 
Sbjct: 223 TDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPEC--SSEDLDHG 280

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYPVV 313
           V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ ASYP+V
Sbjct: 281 VLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 115/207 (55%), Positives = 138/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FSTTGSLE    +  GK +SLSEQ LVDC+ +  NQGCNGGL  Q
Sbjct: 126 VTEVKNQGQCGSCWAFSTTGSLEGQVFKKTGKLVSLSEQNLVDCSTSEGNQGCNGGLMDQ 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE AYPYTG DG C+F    VG  V   V++  G E+ L+ AV  V P
Sbjct: 186 AFTYIKKNGGIDTEAAYPYTGSDGTCRFLENKVGATVSGFVDVKSGDENALKEAVATVGP 245

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FY+ GVY+   C +T +D  H V+ VGYG E G  YWL+KNSWG +W
Sbjct: 246 ISVAIDASSIFFQFYRGGVYNPWFCSSTELD--HGVLVVGYGTEGGKDYWLVKNSWGSSW 303

Query: 288 GDHGYFKM-EMGKNMCGIATCASYPVV 313
           G  GY KM    KN CGIAT ASYP V
Sbjct: 304 GLKGYIKMVRNKKNRCGIATQASYPTV 330


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/217 (51%), Positives = 145/217 (66%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R+   I+PVKDQG CGSCW FS+TG+LE    +  GK ISLSEQ L+DC+  + N
Sbjct: 124 ESVDWRVKGAITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL  QAF+YIK N G+DTE  YPY  +D VC+++  N G      V+I  G ED+
Sbjct: 184 EGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDNVCRYNPRNRGAIDRGFVHIPSGEEDK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V PVSVA +   + F+FY  GVY    C +   D++H V+ VGYG ++G  YW
Sbjct: 244 LKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCDSD--DLDHGVLVVGYGSDNGKDYW 301

Query: 278 LIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           L+KNSW E+WGD GY K+    KN CGIAT ASYP+V
Sbjct: 302 LVKNSWSEHWGDEGYIKIARNRKNHCGIATAASYPLV 338


>gi|326501772|dbj|BAK02675.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/207 (54%), Positives = 135/207 (65%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC+    N GCNGGL  Q
Sbjct: 129 VTDVKDQGQCGSCWAFSTTGALEGQHFKQTGKLVSLSEQNLVDCSGKQGNMGCNGGLMDQ 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTE++YPY   D  C+F + NVG       +IT   E  LQ AV  V P
Sbjct: 189 AFEYIKENNGIDTEDSYPYEAVDNQCRFKAANVGATDTGFTDITSKDESALQQAVATVGP 248

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ YK GVY+   C  T +D  H V+AVGYG + G  YWL+KNSWGE W
Sbjct: 249 ISVAIDAGHTSFQLYKHGVYNEPFCSQTRLD--HGVLAVGYGTDSGKDYWLVKNSWGEGW 306

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   K N CGIAT ASYP+V
Sbjct: 307 GDKGYIKMTRNKRNQCGIATAASYPLV 333


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/216 (52%), Positives = 141/216 (65%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW+FS TGSLE  + +  GK +SLSEQ LVDC++ F N G
Sbjct: 124 IDWRDKGAVTPVKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNG 183

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF YIK NGG+DTE+AYPY  +D  C +  +N G      V+I  G ED+LQ
Sbjct: 184 CNGGLMDNAFRYIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQ 243

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWL 278
            AV  V PVSVA +     F+ Y  GVY    C  + +D  H V+ VGYG E DG  YWL
Sbjct: 244 SAVATVGPVSVAIDASHQSFQLYSGGVYYEPDCSASQLD--HGVLVVGYGTEDDGTDYWL 301

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG++WGD GY KM   + N CGIAT ASYP+V
Sbjct: 302 VKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 162/301 (53%), Gaps = 50/301 (16%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           S+ ++   + K+Y    E  +R+  +  N   IR  N KG  + L +N            
Sbjct: 26  SWIQWKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFILKMNQFGDMTNSEFKA 85

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             ++PVKDQG CGSCW FSTTGSLE  +
Sbjct: 86  FNGYLSHKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQH 145

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
            +  GK +SLSEQ LVDC+ A+ N GC+GGL   AF YIK N G+D+E +YPYT +DG C
Sbjct: 146 FKKTGKLVSLSEQNLVDCSTAYGNNGCDGGLMDNAFTYIKENKGIDSEASYPYTAEDGKC 205

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCG 253
            F   +V       V+I  G E++L+ AV  V P+SVA +   + F+FY SGVY+   C 
Sbjct: 206 VFKKSSVAATDTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCS 265

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYPV 312
           +T +D  H V+ VGYG E G  YWL+KNSW  +WGD GY KM    KN CGIAT ASYP+
Sbjct: 266 STELD--HGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKASYPL 323

Query: 313 V 313
           V
Sbjct: 324 V 324


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/216 (52%), Positives = 141/216 (65%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW+FS TGSLE  + +  GK +SLSEQ LVDC++ F N G
Sbjct: 124 IDWRDKGAVTPVKDQGQCGSCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKFGNNG 183

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF YIK NGG+DTE+AYPY  +D  C +  +N G      V+I  G ED+LQ
Sbjct: 184 CNGGLMDNAFRYIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQ 243

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWL 278
            AV  V PVSVA +     F+ Y  GVY    C  + +D  H V+ VGYG E DG  YWL
Sbjct: 244 SAVATVGPVSVAIDASHQSFQLYSGGVYYEPDCSASQLD--HGVLVVGYGTEDDGTDYWL 301

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG++WGD GY KM   + N CGIAT ASYP+V
Sbjct: 302 VKNSWGKSWGDQGYIKMARNRNNNCGIATEASYPLV 337


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  224 bits (572), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 112/217 (51%), Positives = 140/217 (64%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FSTTGSLE  + +  G+ +SLSEQ LVDC+  F N
Sbjct: 144 KTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGRMVSLSEQNLVDCSGKFGN 203

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK NGG+DTE +YPY G DG+C F   +VG      V+I  G E  
Sbjct: 204 NGCEGGLMDNAFKYIKANGGIDTELSYPYNGTDGICHFEKSDVGATDTGFVDIPEGNEQL 263

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V PVSVA +   + F+FY  GVY   +C +  +D  H V+ VGYG +DG  YW
Sbjct: 264 LKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLD--HGVLVVGYGTKDGQDYW 321

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WGD GY  M   K N CGIA+ ASYP+V
Sbjct: 322 LVKNSWGTTWGDDGYIYMTRNKENQCGIASSASYPLV 358


>gi|261289783|ref|XP_002611753.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
 gi|229297125|gb|EEN67763.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
          Length = 307

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 117/234 (50%), Positives = 146/234 (62%), Gaps = 8/234 (3%)

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
           R   +  NL  +  T    + +R    ++PVK+Q  CGSCW FSTTGSLE    +  GK 
Sbjct: 80  RVHQYDSNLVELPDT----VDWRTKGYVTPVKNQEQCGSCWAFSTTGSLEGQTFKKTGKL 135

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           +SLSEQ LVDC+  F NQGCNGGL   AF+YIK NGG+DTE++YPY  +DG C+F   +V
Sbjct: 136 VSLSEQNLVDCSGEFGNQGCNGGLMDDAFKYIKANGGIDTEDSYPYEARDGKCRFKPADV 195

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVN 260
           G  V    +I+ G E  L  AV  V P+SVA +     F+ Y  GVY   +C +T +D  
Sbjct: 196 GATVTGYTDISEGDEGALTQAVATVGPISVAIDASHHTFQMYSHGVYYEPQCSSTELD-- 253

Query: 261 HAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           H V+AVGYG E G  YWL+KNSWGE WG +GY  M   K N CGIAT ASYP+V
Sbjct: 254 HGVLAVGYGTEGGKDYWLVKNSWGEVWGQNGYIMMSRNKNNQCGIATSASYPLV 307


>gi|161408095|dbj|BAF94151.1| cathepsin L-like cysteine protease 1 [Plautia stali]
          Length = 344

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/256 (46%), Positives = 151/256 (58%), Gaps = 15/256 (5%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L F R  R   K+ E +         F  N D +     K + +R    ISPVKDQGHCG
Sbjct: 88  LGFNRSLRATNKVPEGI--------PFRHNKDAVIQ---KEVDWRQKGAISPVKDQGHCG 136

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FS+TG+LEA      G+ +SLSEQ L+DC+  + N GC GGL  QAF+Y++ N G+
Sbjct: 137 SCWAFSSTGALEAHTFLKKGRRVSLSEQNLIDCSLNYGNNGCEGGLMEQAFQYVRDNDGI 196

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-G 238
           DTEEAYPY G+D  C+F   NVG      V I  G E  L  AV    P+S+A +  +  
Sbjct: 197 DTEEAYPYEGEDSECRFKKNNVGATDAGFVTIPSGDEQALMEAVATQGPLSIAIDASNPS 256

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F+FY  GVY   +C +  +D  H V+ VGYGVE    YWL+KNSW E WG++GY KM   
Sbjct: 257 FQFYSEGVYYEPECSSAQLD--HGVLLVGYGVEKDQKYWLVKNSWSEQWGENGYIKMARN 314

Query: 299 K-NMCGIATCASYPVV 313
           K N CGIAT AS+P+V
Sbjct: 315 KDNNCGIATQASFPIV 330


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           I+PVKDQG CGSCW FS+TG+LE    +  GK ISLSEQ L+DC+  + N+GCNGGL  Q
Sbjct: 134 ITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKYGNEGCNGGLMDQ 193

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G+DTE  YPY  +D VC+++  N G      V+I  G ED+L+ AV  V P
Sbjct: 194 AFQYIKDNKGIDTENTYPYEAEDDVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 253

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +   + F+FY  GVY    C +   D++H V+ VGYG ++G  YWL+KNSW E+W
Sbjct: 254 VSVAIDASHESFQFYSKGVYYEPSCDSD--DLDHGVLVVGYGSDNGKDYWLVKNSWSEHW 311

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           GD GY K+    KN CG+AT ASYP+V
Sbjct: 312 GDEGYIKIARNRKNHCGVATAASYPLV 338


>gi|410898132|ref|XP_003962552.1| PREDICTED: cathepsin L-like [Takifugu rubripes]
          Length = 335

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 138/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FS TGSLE    +  GK +SLSEQQLVDC+  + N GCNGGL   
Sbjct: 131 VTGVKDQKQCGSCWAFSATGSLEGQNFRKTGKLVSLSEQQLVDCSGDYGNMGCNGGLMDY 190

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+ NGG+DTE++YPY  +DG C+F  ENVG +    V++T+G ED L+ AV  + P
Sbjct: 191 AFKYIQENGGIDTEKSYPYEAEDGQCRFKPENVGAKCTGYVDVTVGDEDALKEAVATIGP 250

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSV  +     F+ Y SGVY    C  +  D++H V+AVGYG ++G  YWL+KNSWG  W
Sbjct: 251 VSVGIDASHSSFQLYDSGVYDEQDC--SSQDLDHGVLAVGYGTDNGQDYWLVKNSWGLGW 308

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIAT ASYP+V
Sbjct: 309 GQEGYIMMSRNKDNQCGIATAASYPLV 335


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 108/207 (52%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           I+PVKDQG CGSCW FS+TG+LE    +  GK +SLSEQ L+DC+  + N+GCNGGL  Q
Sbjct: 134 ITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQ 193

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G+DTE  YPY  +DGVC+++  N G      V+I  G ED+L+ AV  V P
Sbjct: 194 AFQYIKDNKGIDTENTYPYEAEDGVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 253

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +   + F+FY  G Y    C +   D++H V+ VGYG ++G  YWL+KNSW E+W
Sbjct: 254 VSVAIDASHESFQFYSKGXYYEPSCDSD--DLDHGVLVVGYGSDNGEDYWLVKNSWSEHW 311

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           GD GY K+    KN CG+AT ASYP+V
Sbjct: 312 GDEGYIKIARNRKNHCGVATAASYPLV 338


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 163/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYKAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+E +L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 110/217 (50%), Positives = 142/217 (65%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QGHCGSCW FSTTG+LE    +  GK +SLSEQ LVDC+ ++ N
Sbjct: 120 KEVDWRTKGAVTPVKNQGHCGSCWAFSTTGALEGQNFRKTGKLVSLSEQNLVDCSGSYGN 179

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK N G+DTE++YPY G+D  C+F   ++G      V+IT G E+ 
Sbjct: 180 NGCEGGLMDNAFQYIKENHGIDTEKSYPYEGEDETCRFRKTSIGATDSGFVDITQGDEEA 239

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L  AV  + P+SVA +     F+FY  GVY   +C +  +D  H V+ VGYGVED   YW
Sbjct: 240 LMQAVATIGPISVAIDASHQSFQFYSEGVYYEPECSSENLD--HGVLVVGYGVEDNQKYW 297

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WGD GY KM   + N CGIAT ASYP+V
Sbjct: 298 LVKNSWGTQWGDGGYIKMARDQDNNCGIATQASYPLV 334


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 163/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHRGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+E +L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 163/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+E +L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 110/217 (50%), Positives = 143/217 (65%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW+FSTTGSLE  + +   K +SLSEQ L+DC+++F N
Sbjct: 117 KTVDWRKKGAVTPVKNQGQCGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDCSRSFGN 176

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK N G+DTE++YPY   DGVC F+   VG      V+I  G E++
Sbjct: 177 NGCEGGLMDYAFKYIKANKGIDTEQSYPYNATDGVCHFNKSAVGATDTGFVDIPEGDENK 236

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V PVSVA +   + F+FY  GVY   +C +  +D  H V+ VGYG +DG  YW
Sbjct: 237 LKKAVATVGPVSVAIDASHESFQFYSEGVYDEPECDSEQLD--HGVLVVGYGTKDGQDYW 294

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WGD GY  M   K N CGIA+ ASYP+V
Sbjct: 295 LVKNSWGTTWGDGGYIYMSRNKDNQCGIASAASYPLV 331


>gi|226469954|emb|CAX70258.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 115/279 (41%), Positives = 165/279 (59%), Gaps = 22/279 (7%)

Query: 41  GLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG 100
           G+ +F       + + R   S  R A+  G  + S E  KL                   
Sbjct: 110 GVNNFTDKTEYELRKLRGYRSACRIAKPKGSTFISSEHAKLP----------------DR 153

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS+TG++E  +++   + ++LSEQQL+DC++++ N G
Sbjct: 154 VDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDCSKSYGNNG 213

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG----VCKFSSENVGVQVLDSVNITLGAE 216
           C GGL   AF+Y++ N G+D+E +YPY   DG     C F+  N+  QV   +NI  G E
Sbjct: 214 CEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNFTNIMAQVTGYINIHEGDE 273

Query: 217 DELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
             L +AV  + PVSVA    +  F  YKSG+YS  +C +   D++H V+ VGYG+EDG P
Sbjct: 274 RALMNAVTTIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVGYGIEDGKP 333

Query: 276 YWLIKNSWGENWGDHGYFK-MEMGKNMCGIATCASYPVV 313
           YWLIKNSWGE+WGD GY K ++  KNMC +A+ ASYP+V
Sbjct: 334 YWLIKNSWGEDWGDKGYVKILKDSKNMCSVASAASYPLV 372


>gi|330800456|ref|XP_003288252.1| hypothetical protein DICPUDRAFT_55299 [Dictyostelium purpureum]
 gi|325081708|gb|EGC35214.1| hypothetical protein DICPUDRAFT_55299 [Dictyostelium purpureum]
          Length = 531

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 124/302 (41%), Positives = 162/302 (53%), Gaps = 51/302 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  F   Y K YE+ EE  +RF  +    + I S N K LSY+LG N             
Sbjct: 225 FVAFKSEYEKSYENKEEHDMRFKNYKVAHNKIVSHNAKNLSYKLGFNHYADLSDHEFNTL 284

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQG CGSCWTF +TGSLE 
Sbjct: 285 IKPKVARPSNNGAHSVHDDEDIYTIPQSVDWRNQKCVTPVKDQGVCGSCWTFGSTGSLEG 344

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
                 G  +SLSEQQLVDCA    +QGCNGG  + AF+YI   GG+ TE  Y Y  ++ 
Sbjct: 345 TNCVTNGYLVSLSEQQLVDCAYLMGSQGCNGGFAASAFQYIMDAGGIATESDYQYLMQNA 404

Query: 193 VCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSST 250
           +CK  S    GV V   VN+T G+ + L +AV    PV++A +  VD FR+Y+SG+YS+ 
Sbjct: 405 LCKDKSTTFSGVGVSSYVNVTAGSINALLNAVATQGPVAIAIDASVDDFRYYQSGIYSNP 464

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            C N P D++H V+A+GYG  +GV YWL+KNSW  NWG  GYF +E   N+CG A+ A+Y
Sbjct: 465 SCKNGPDDLDHEVLAIGYGTLNGVDYWLVKNSWSTNWGMEGYFMLERANNLCGPASQATY 524

Query: 311 PV 312
           P+
Sbjct: 525 PL 526


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 108/207 (52%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           I+PVKDQG CGSCW FS+TG+LE    +  GK +SLSEQ L+DC+  + N+GCNGGL  Q
Sbjct: 130 ITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQ 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G+DTE  YPY  +D VC+++  N G      V+I  G ED+L+ AV  V P
Sbjct: 190 AFQYIKDNKGIDTENTYPYEAEDDVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 249

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +   + F+FY  GVY    C +   D++H V+ VGYG ++G  YWL+KNSW E+W
Sbjct: 250 VSVAIDASHESFQFYSKGVYYEPSCDSD--DLDHGVLVVGYGSDNGKDYWLVKNSWSEHW 307

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           GD GY KM    KN CG+A+ ASYP+V
Sbjct: 308 GDEGYIKMARNRKNHCGVASAASYPLV 334


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 163/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+E +L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  223 bits (568), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 144/216 (66%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  GK +SLSEQ LVDC+  + N G
Sbjct: 126 VDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNG 185

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG+   AF+YIK NGG+DTE++YPY   D  C F+ + VG      V+I  G E+ L+
Sbjct: 186 CNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDEEALK 245

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            A+  V PVS+A +   + F+FY  GVY   +C +  +D  H V+AVGYG  E+G  YWL
Sbjct: 246 KALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLD--HGVLAVGYGTSEEGEDYWL 303

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WGD GY KM   + N CG+ATCASYP+V
Sbjct: 304 VKNSWGTTWGDQGYVKMARNRDNHCGVATCASYPLV 339


>gi|405966500|gb|EKC31778.1| Cathepsin L [Crassostrea gigas]
          Length = 271

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 112/207 (54%), Positives = 137/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ +K+QGHCGSCW+FS TGSLE  + +A  K +SLSEQ LVDC+Q   N GC GGL   
Sbjct: 67  VTDIKNQGHCGSCWSFSATGSLEGQHFKASKKLVSLSEQNLVDCSQREGNHGCQGGLMDN 126

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YI+ N G+DTEE+YPYT K+G C F  ENVG      V+I    ED+LQ AV  V P
Sbjct: 127 AFRYIESNKGIDTEESYPYTAKNGFCHFKKENVGATDTGYVDIPHMQEDKLQEAVATVGP 186

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y+ GVYS   C ++ +D  H V+AVGYG E G  YWL+KNSWG +W
Sbjct: 187 ISVAIDAGHKSFQLYREGVYSEPACSSSKLD--HGVLAVGYGTESGDDYWLVKNSWGTSW 244

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K NMCGIAT ASYP V
Sbjct: 245 GMQGYVMMARNKHNMCGIATQASYPKV 271


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/217 (51%), Positives = 142/217 (65%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FSTTGSLE  + +   K +SLSEQ LVDC+++F N
Sbjct: 121 KTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGPHFRKTRKLVSLSEQNLVDCSRSFGN 180

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK N G+DTE +YPY   DGVC F+  +VG      V+I  G E++
Sbjct: 181 NGCEGGLMDNAFKYIKSNKGIDTEWSYPYNATDGVCHFNRSDVGATDTGFVDIPEGDENK 240

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V PVSVA +   + F+FY  GVY   +C +  +D  H V+ VGYG +DG  YW
Sbjct: 241 LKKAVAAVGPVSVAIDASHESFQFYSEGVYDEPECSSEQLD--HGVLVVGYGTKDGQDYW 298

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WGD GY  M   K N CGIA+ ASYP+V
Sbjct: 299 LVKNSWGTTWGDEGYIYMTRNKDNQCGIASSASYPLV 335


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 164/310 (52%), Gaps = 60/310 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------- 108
           + ++   +GK Y S EE   R   + KNLD++   N K      +Y LG+N         
Sbjct: 28  WNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADLKNEE 87

Query: 109 ------------------------------------------ISPVKDQGHCGSCWTFST 126
                                                     ++PVKDQG CGSCW FST
Sbjct: 88  FVAMMTGFRVNGTSKAAKGSTFLPSNNIGELPKTVDWRTKGYVTPVKDQGQCGSCWAFST 147

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
           TGSLE  + +A GK +SLSEQ LVDC+    N+GC+GGL  QAF+YI   GG+DTEE+YP
Sbjct: 148 TGSLEGQHFKATGKLVSLSEQNLVDCSGKEGNEGCDGGLMDQAFQYIIKAGGIDTEESYP 207

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSG 245
           Y   DG C F   N+G  V    ++T  +E  LQ AV  + P+SVA +     F+ YKSG
Sbjct: 208 YKAVDGECHFKKANIGATVTGYTDVTSDSETALQKAVAHIGPISVAIDASHMSFQLYKSG 267

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCG 303
           VY+   C +T +D  H V+AVGYG   DG  YW++KNSW E WG +GY  M   K N CG
Sbjct: 268 VYNEPDCSSTLLD--HGVLAVGYGTTSDGTDYWIVKNSWAETWGMNGYLWMSRNKDNQCG 325

Query: 304 IATCASYPVV 313
           IAT ASYP+V
Sbjct: 326 IATQASYPLV 335


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+KDQGHCGSCW+FSTTG+LE  + +  GK +SLSEQ L+DC+ ++ N GCNGG+   
Sbjct: 147 VTPIKDQGHCGSCWSFSTTGALEGQHFRKTGKLVSLSEQNLIDCSTSYGNNGCNGGVMDY 206

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G DTE++YPY   DG C+F  E VG       ++  G E++++ AV +V P
Sbjct: 207 AFQYIKDNDGDDTEDSYPYEAADGPCRFKKEYVGATDTGYTDLPKGDEEKMKEAVAMVGP 266

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+ Y+SGVY   +C   P  ++H V+ VGYG E G  YWL+KNSWG  W
Sbjct: 267 VSVAIDASHTSFQMYQSGVYDEVEC--DPEGLDHGVLVVGYGTELGQDYWLVKNSWGTKW 324

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   K N CGI++ ASYP+V
Sbjct: 325 GDEGYIKMSRNKNNQCGISSMASYPLV 351


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 163/305 (53%), Gaps = 58/305 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           F   + K Y+S  E  LRF  F++N  +I   N K   GL SY+LG+N            
Sbjct: 30  FKTTHKKSYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAR 89

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FS TGSL
Sbjct: 90  IFNGHHGTRKTGGSTFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSL 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF+YIK N G+DTE++YPY   
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           DG C+F  E+VG      V I  G+E +L+ AV  V P+SVA +     F+ Y  GVY  
Sbjct: 210 DGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDE 269

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCA 308
            +C  +  D++H V+ VGYGV+ G  YWL+KNSW E+WGD GY  M     N CGIA+ A
Sbjct: 270 PEC--SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQA 327

Query: 309 SYPVV 313
           SYP+V
Sbjct: 328 SYPLV 332


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/215 (51%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FSTTGSLE  +    G  ISL+EQQLVDC++ +  QG
Sbjct: 111 VDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQG 170

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG  + AF+YIK N G+DTE AYPY  +DG C+F S +V        NI  G+E  LQ
Sbjct: 171 CNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQ 230

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  + P+SV  +     F+FY SGVY    C  +P  ++HAV+AVGYG E G  +WL+
Sbjct: 231 QAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSC--SPSYLDHAVLAVGYGSEGGQDFWLV 288

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSW  +WGD GY KM   + N CGIAT ASYP+V
Sbjct: 289 KNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323


>gi|47230018|emb|CAG10432.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 294

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/207 (51%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FS TGSLE   ++  GK +SLSEQQLVDC+  + N GC GGL   
Sbjct: 90  VTGVKDQKQCGSCWAFSATGSLEGQNYRKTGKLVSLSEQQLVDCSGDYGNMGCGGGLMDS 149

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+ NGG+DTEE+YPY  +DG C+F  +N+G +    V++T G ED L+ AV  + P
Sbjct: 150 AFKYIQENGGIDTEESYPYEAEDGKCRFKPQNIGAKCTGYVDVTAGDEDALKEAVATIGP 209

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+ Y+SGVY   +C  +  D++H V+AVGYG ++G  YWL+KNSWG  W
Sbjct: 210 VSVAIDASHSSFQLYESGVYDELEC--SSEDLDHGVLAVGYGTDNGQDYWLVKNSWGLGW 267

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIA+ ASYP+V
Sbjct: 268 GQKGYIMMSRNKHNQCGIASMASYPLV 294


>gi|198427748|ref|XP_002130282.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 340

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 137/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW+FS TGSLE  + +  GK +SLSEQ L+DC+    N GCNGGL  Q
Sbjct: 136 VTPVKNQGQCGSCWSFSATGSLEGQHKKKTGKLVSLSEQNLIDCSTPEGNDGCNGGLMDQ 195

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK  GG+DTE  YPY  KD  C+F+  + G      V+I  G E+ L+ A   V P
Sbjct: 196 AFKYIKIQGGIDTEAYYPYEAKDDTCRFNITDSGATDTGFVDIKSGDEEMLKEAAATVGP 255

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FY +GVYS T C +T +D  H V+ VGYG E+G  YWL+KNSWGE W
Sbjct: 256 ISVAIDASHTSFQFYSNGVYSETACSSTMLD--HGVLVVGYGTENGKDYWLVKNSWGEGW 313

Query: 288 GDHGYFKMEM-GKNMCGIATCASYPVV 313
           G+ GY KM     N CGIAT ASYP+V
Sbjct: 314 GEAGYIKMSRNADNQCGIATQASYPLV 340


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FS TGSLE  + +  G  +SLSEQQLVDC+  + N GC GGL   
Sbjct: 130 VTDVKDQKQCGSCWAFSATGSLEGQHFRKTGTLVSLSEQQLVDCSGDYGNMGCMGGLMDY 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+ NGG+DTEE+YPY  ++G C+++ +N+G        ++ G ED L+ AV  + P
Sbjct: 190 AFQYIQANGGIDTEESYPYEAENGKCRYNPDNIGATSTGYTEVSQGDEDALKEAVATIGP 249

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +     F+FY+SGVY+   C  + ++++H V+AVGYG EDG  YWL+KNSWG  W
Sbjct: 250 ISVGIDASQMSFQFYESGVYNEPDC--SSLELDHGVLAVGYGTEDGNDYWLVKNSWGLEW 307

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   K N CGIAT ASYP+V
Sbjct: 308 GDKGYIKMSRNKSNQCGIATAASYPLV 334


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 111/217 (51%), Positives = 138/217 (63%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FSTTGSLE  + +  G  +SLSEQ LVDC+ AF N
Sbjct: 123 KTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKSGDMVSLSEQNLVDCSTAFGN 182

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK NGG+DTE++YPY G DG C F   +VG      V+I  G E  
Sbjct: 183 NGCEGGLMDNAFKYIKANGGIDTEKSYPYNGTDGTCHFKKSDVGATDTGFVDIPEGNEHL 242

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V P+SVA +     F+FY  GVY   +C +  +D  H V+ VGYG +D   YW
Sbjct: 243 LKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECSSENLD--HGVLVVGYGTKDDQDYW 300

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WGD GY  M   K N CGIA+ ASYP+V
Sbjct: 301 LVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYPLV 337


>gi|432936690|ref|XP_004082231.1| PREDICTED: cathepsin L-like [Oryzias latipes]
          Length = 334

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/233 (47%), Positives = 145/233 (62%), Gaps = 9/233 (3%)

Query: 83  FATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
           F    +N DL  + + +   Y     ++ VKDQ  CGSCW FS TGSLE    +  GK +
Sbjct: 109 FFRLPENKDLPAAVDWRDKGY-----VTDVKDQKQCGSCWAFSATGSLEGQTFRKTGKLV 163

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQQLVDC+  + N GC GGL   AF YI+  GG+DTEE+YPY  +DG C++  + VG
Sbjct: 164 SLSEQQLVDCSGDYGNMGCGGGLMDDAFRYIQATGGIDTEESYPYEAEDGECRYKPDAVG 223

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNH 261
                 V+++ G ED LQ AV  + P+SV  +     F+ Y+SG+Y   +C ++ +D  H
Sbjct: 224 ATCTGYVDVSSGDEDALQEAVATIGPISVGIDASHISFQLYESGLYDEPQCSSSELD--H 281

Query: 262 AVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            V+AVGYG E+G  YWL+KNSWG  WGD GY KM   K N CGIAT ASYP+V
Sbjct: 282 GVLAVGYGSENGQDYWLVKNSWGLTWGDQGYIKMSKNKSNQCGIATAASYPLV 334


>gi|52345644|ref|NP_001004869.1| cathepsin L2 precursor [Xenopus (Silurana) tropicalis]
 gi|49522051|gb|AAH74718.1| MGC69486 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/294 (42%), Positives = 176/294 (59%), Gaps = 22/294 (7%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFARRYGKIYESV-----EEMKLRFATF-- 86
           R++    LR  E   L+  +G+  H+L   +F     + +  +      + K+R +TF  
Sbjct: 49  RVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMTNEEFRQLMNGYKNQKKIRGSTFLA 108

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
             N +  +S + +   Y     ++PVKDQG CGSCW FSTTG+LE  +++  GK ISLSE
Sbjct: 109 PNNFESPKSVDWRKKGY-----VTPVKDQGQCGSCWAFSTTGALEGQHYRNTGKMISLSE 163

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQV 205
           Q LVDC++A  NQGCNGGL  QAF+Y+K NGG+D+E++YPYT KD   C +         
Sbjct: 164 QNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNYNSAND 223

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V++T G+E +L +AV  V PVSVA +     F+FYKSG+Y   +C  +  D++H V+
Sbjct: 224 TGFVDVTSGSEKDLMNAVASVGPVSVAVDAGHQSFQFYKSGIYYEPEC--SSEDLDHGVL 281

Query: 265 AVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            VGYG     EDG  YW++KNSW E WG+ GY  +   + N CGIAT ASYP+V
Sbjct: 282 VVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDRHNHCGIATAASYPLV 335


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/215 (51%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FSTTGSLE  +    G  ISL+EQQLVDC++ +  QG
Sbjct: 111 VDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQG 170

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG  + AF+YIK N G+DTE +YPY  +DG C+F S +V        NI  G+E  LQ
Sbjct: 171 CNGGWMNDAFDYIKANNGIDTEASYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQ 230

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  + P+SV  +     F+FY SGVY    C  +P  ++HAV+AVGYG E G  +WL+
Sbjct: 231 QAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSC--SPSYLDHAVLAVGYGSEGGQDFWLV 288

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSW  +WGD GY KM   + N CGIAT ASYP+V
Sbjct: 289 KNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/240 (46%), Positives = 153/240 (63%), Gaps = 11/240 (4%)

Query: 78  EMKLRFATF--SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYH 135
           E + + ATF    N+ ++ S + +   Y     ++PVK+QG CGSCW FSTTG+LE  + 
Sbjct: 99  ESQPKGATFLPPANVKVVDSIDWRSKGY-----VTPVKNQGQCGSCWAFSTTGALEGQHF 153

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 195
           +  GK +SLSEQ LVDC+  + N GC GGL   AF+YIK NGG+DTE++YPY  KDGVC 
Sbjct: 154 RKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAFQYIKENGGIDTEKSYPYLAKDGVCH 213

Query: 196 FSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGN 254
           ++   +G +    V+I  G E+ LQ A+  V P+S+A +     F FY  GVY    C +
Sbjct: 214 YNKSAIGAKDTGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQGVYDDPDCSS 273

Query: 255 TPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           T +D  H V+AVGYG +DG  YWL+KNSWG +WG+ GY K+     + CG+A+ ASYP+V
Sbjct: 274 TRLD--HGVLAVGYGTDDGKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYPLV 331


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 143/216 (66%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  GK +SLSEQ LVDC+  + N G
Sbjct: 126 VDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNG 185

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG+   AF+YIK NGG+DTE++YPY   D  C F+ + VG      V+I  G E+ L+
Sbjct: 186 CNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDEEALK 245

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            A+  V PVS+A +   + F+FY  GVY   +C +  +D  H V+AVGYG  E+G  YWL
Sbjct: 246 KALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLD--HGVLAVGYGTSEEGEDYWL 303

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WGD GY KM     N CG+ATCASYP+V
Sbjct: 304 VKNSWGTTWGDQGYVKMARNHDNHCGVATCASYPLV 339


>gi|290462225|gb|ADD24160.1| Cathepsin L [Lepeophtheirus salmonis]
          Length = 334

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/231 (49%), Positives = 151/231 (65%), Gaps = 11/231 (4%)

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
           SKN++L    +     +R    ++PVK+QG CGSCW+FS TGSLE    +  GK ISLSE
Sbjct: 111 SKNINLPEHVD-----WREEGAVTPVKNQGQCGSCWSFSATGSLEGQDFRKTGKLISLSE 165

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVL 206
           Q LVDC++ + N GC GGL   AF+YI+ N G+DTE +YPY G DG C +  +N G   +
Sbjct: 166 QNLVDCSRKYGNNGCEGGLMDYAFKYIQDNNGIDTEASYPYEGIDGHCHYDPKNKGGSDI 225

Query: 207 DSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVA 265
             V+I  G+E +LQ A+  V P+SVA +     F+FY  GVYS  KC  +P +++H V+A
Sbjct: 226 GFVDIKKGSEKDLQKALATVGPISVAIDASHMSFQFYSHGVYSEKKC--SPENLDHGVLA 283

Query: 266 VGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           VGYG ++  G  YWL+KNSW E WG+ GY KM   K NMCGIA+ ASYPVV
Sbjct: 284 VGYGTDEVTGEDYWLVKNSWSEKWGEDGYIKMARNKDNMCGIASSASYPVV 334


>gi|261289811|ref|XP_002611767.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
 gi|229297139|gb|EEN67777.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
          Length = 336

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/221 (51%), Positives = 143/221 (64%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 118 KSVDWRNSAMVSEVKDQGECGSCWAFSTTGSLEGQHANKTGKLVDLSEQQLVDCSKDFGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YIK NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 178 QGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDKPCKFDNSSVGATLIGYKDVKSGNEH 237

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V P+SVA +   + F+FY SGVY   +C +  +D  H V+ VGYG  +    
Sbjct: 238 ALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQCSSEQLD--HGVLVVGYGAMNDNSH 295

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG NWGD GY  M   K N CGIAT ASYP+V
Sbjct: 296 QAFWIVKNSWGPNWGDQGYIMMSRNKDNQCGIATSASYPLV 336


>gi|156371477|ref|XP_001628790.1| predicted protein [Nematostella vectensis]
 gi|156215775|gb|EDO36727.1| predicted protein [Nematostella vectensis]
          Length = 330

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 138/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FSTTGSLE    +  GK +SLSEQ LVDC+ A+ N GC GGL   
Sbjct: 126 VTPVKNQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDY 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK NGG+DTEE+YPY  ++  C+F   N+G      V++T G E+ L+ A G V P
Sbjct: 186 AFKYIKENGGIDTEESYPYEARNDRCRFQKSNIGAVDTGFVDVTHGDEEALKTAAGTVGP 245

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FY SGVY++  C +T +D  H V+ VGYG   G  YWL+KNSWGE W
Sbjct: 246 ISVAIDAGHMSFQFYHSGVYNNAGCSSTSLD--HGVLVVGYGTYQGSDYWLVKNSWGERW 303

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CG+AT ASYP+V
Sbjct: 304 GMEGYIMMSRNKNNQCGVATQASYPLV 330


>gi|229595080|ref|XP_001020177.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|225566401|gb|EAR99932.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 405

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/341 (38%), Positives = 186/341 (54%), Gaps = 46/341 (13%)

Query: 10  SVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQAR------HALSFA 63
           +V   LC +A  +       DSN   L+S  GL D+  + L  I Q+       ++  F 
Sbjct: 58  AVYFTLCLSAVIAQ------DSNQEILISR-GLVDYTDADLLSIYQSYGYEPDPNSERFQ 110

Query: 64  RFARRYGKIYESVEEMKLRFA------TFSKNLDLIR---STNCKG-------------- 100
            F  R  KI E       +++      TF  +L+L +   S NC                
Sbjct: 111 LFKSRLAKIIEHNSNPDKKYSQIINKLTFQTDLELKKFRASQNCSATAQANTRSFRKYDL 170

Query: 101 ------LSYRLGLNISPVKDQGH-CGSCWTFSTTGSLEAAYHQAFGKG-ISLSEQQLVDC 152
                 + +R    ++ VK QG  CGSCW F+   +LE+ Y    GK  I  SEQQLVDC
Sbjct: 171 SQLPQYVDWREKGVVTQVKSQGKDCGSCWAFAAVAALESHYALKTGKKPIQFSEQQLVDC 230

Query: 153 AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT 212
           A+ F+ +GC+GGLPS+ FEY+ Y GG+  E  YPY G+D  C+F+S    VQV  S NIT
Sbjct: 231 ARKFDTKGCSGGLPSKGFEYLAYAGGIQNEADYPYEGEDKNCRFNSSKTVVQVQKSYNIT 290

Query: 213 LGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 272
              E+EL + +    PV++A++V   F  YK+GV++S+ C   P DVNHAV+AVGY +  
Sbjct: 291 FQDENELIYHLANYGPVTIAYQVNSDFDNYKNGVFTSSNCSKDPEDVNHAVLAVGYNMTG 350

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
              Y++ KNSWG +WG +GYF +E+G NMCG+A CASYP++
Sbjct: 351 --KYFIAKNSWGNDWGMNGYFYIELGSNMCGLADCASYPII 389


>gi|33242876|gb|AAQ01142.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 115/221 (52%), Positives = 143/221 (64%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YIK NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 176 QGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+AVGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLAVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG +WGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS+TG+LE  + +  G+ +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 121 VTPVKNQGQCGSCWAFSSTGALEGQHFKKTGRLVSLSEQNLVDCSTDYGNNGCNGGLMDN 180

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE  YPY G+DG C++S  ++G      V+I  G ED L+ AV  V P
Sbjct: 181 AFSYIKANGGIDTETGYPYEGQDGTCRYSKSSIGADDTGFVDIPEGDEDALKQAVATVGP 240

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+FY SGVY   +C  +P  ++H V+ VGYG ++G  YWL+KNSWG  W
Sbjct: 241 VSVAIDASHMSFQFYHSGVYDEPQC--SPSALDHGVLVVGYGTDNGKDYWLVKNSWGTGW 298

Query: 288 GDHGYFKMEM-GKNMCGIATCASYPVV 313
           G  GY  M    +N CGIA+ ASYP+V
Sbjct: 299 GTEGYIYMSRNNQNQCGIASKASYPLV 325


>gi|33242878|gb|AAQ01143.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/221 (52%), Positives = 143/221 (64%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YIK NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 176 QGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+AVGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLAVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG +WGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 138/217 (63%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TGSLE  + +  G  +SLSEQ LVDC+  F N
Sbjct: 121 KTVDWRTKGAVTPVKNQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDCSTDFGN 180

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YI+ N G+DTE++YPY G DG C F    VG      V+I  G+E +
Sbjct: 181 NGCEGGLMDNAFKYIRANKGIDTEKSYPYNGTDGTCHFKKSTVGATDSGFVDIKEGSETQ 240

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V P+SVA +   + F+FY  GVY   +C +  +D  H V+ VGYG  +G  YW
Sbjct: 241 LKKAVATVGPISVAIDASHESFQFYSDGVYDEPECDSESLD--HGVLVVGYGTLNGTDYW 298

Query: 278 LIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           L+KNSWG  WGD GY +M    KN CGIA+ ASYP+V
Sbjct: 299 LVKNSWGTTWGDEGYIRMSRNKKNQCGIASSASYPLV 335


>gi|33242874|gb|AAQ01141.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/221 (52%), Positives = 143/221 (64%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YIK NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 176 QGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+AVGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLAVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG +WGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|405966499|gb|EKC31777.1| Cathepsin L [Crassostrea gigas]
          Length = 331

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 110/207 (53%), Positives = 137/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ +K+QGHCGSCW+FS TGSLE  + +A  K +SLSEQ LVDC++   N GC GGL   
Sbjct: 127 VTDIKNQGHCGSCWSFSATGSLEGQHFKASKKLVSLSEQNLVDCSKKEGNHGCQGGLMDN 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YI+ N G+DTEE+YPYT K+G C F +ENVG      V+I    ED+LQ AV  V P
Sbjct: 187 AFRYIESNKGIDTEESYPYTAKNGFCHFKAENVGATDTGYVDIPHMQEDKLQEAVATVGP 246

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +     F+ Y+ GVYS   C ++ +D  H V+AVGYG E G  YWL+KNSWG +W
Sbjct: 247 ISVGIDAGHKSFQLYREGVYSEPACSSSKLD--HGVLAVGYGTESGDDYWLVKNSWGTSW 304

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K NMCGIAT ASYP V
Sbjct: 305 GMQGYVMMARNKHNMCGIATQASYPKV 331


>gi|33242872|gb|AAQ01140.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  220 bits (561), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/221 (52%), Positives = 143/221 (64%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSSKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YIK NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 176 QGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+AVGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLAVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG +WGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|444730298|gb|ELW70685.1| Pro-cathepsin H [Tupaia chinensis]
          Length = 418

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 109/209 (52%), Positives = 132/209 (63%), Gaps = 24/209 (11%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  +SPVK+QG CGSCWTFSTTG+LE+A     GK +SL                   
Sbjct: 40  KKGKFVSPVKNQGACGSCWTFSTTGALESAVAITTGKLLSL------------------- 80

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
                AFEYI YN G+  E+ YPY G+DG CKF  +     V D  NITL  E+ +  AV
Sbjct: 81  -----AFEYILYNKGIMGEDTYPYRGQDGHCKFQPQKAIAFVKDVANITLNDEEAMVEAV 135

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            L  PVS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSW
Sbjct: 136 ALYNPVSFAFEVTNDFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSW 195

Query: 284 GENWGDHGYFKMEMGKNMCGIATCASYPV 312
           G  WG +GYF +E GKNMCG+A CASYPV
Sbjct: 196 GPQWGMNGYFLIERGKNMCGLAACASYPV 224


>gi|330434686|gb|AEC22811.1| cathepsin L [Macrobrachium nipponense]
          Length = 342

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 144/218 (66%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQG CGSCW FS TG+LE  +++  G  +SLSEQ LVDC+  F N
Sbjct: 127 KSVDWREKGAVTEVKDQGSCGSCWAFSATGALEGQHYRQTGDLVSLSEQNLVDCSSKFGN 186

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+YIK NGG+DTE++YPY  +D  C+++  N G      V++  G E+ 
Sbjct: 187 NGCNGGLMDNAFQYIKVNGGIDTEKSYPYEAEDEPCRYNPANAGADDRGFVDVREGNENA 246

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPY 276
           L+ A+  + PVSVA +   D F+FY+ GVYS   C    +D  H V+AVGYG  EDG  Y
Sbjct: 247 LKKAIATIGPVSVAIDASQDSFQFYQHGVYSDPDCSAENLD--HGVLAVGYGTTEDGQDY 304

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSW ++WGD GY K+   + NMCGIA+ ASYP+V
Sbjct: 305 WLVKNSWSKSWGDQGYIKIARNQNNMCGIASAASYPLV 342


>gi|34559455|gb|AAQ75437.1| cathepsin L-like protease [Helicoverpa armigera]
 gi|338855117|gb|AEJ31938.1| cathepsin L-like protease [Helicoverpa assulta]
          Length = 341

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 111/216 (51%), Positives = 144/216 (66%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG+LE  + +  G  +SLSEQ L+DC+ A+ N G
Sbjct: 128 VDWRKKGAVTEVKDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNG 187

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF+YIK NGG+DTE+AYPY G D  C+++++N G   +  V+I  G E++L 
Sbjct: 188 CNGGLMDNAFKYIKDNGGIDTEKAYPYEGVDDKCRYNAKNSGADDVGFVDIPQGDEEKLM 247

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            AV  V PVSVA +   + F+FY  GVY    C +T  D++H V+ VGYG  E G  YWL
Sbjct: 248 QAVATVGPVSVAIDASQESFQFYSDGVYYDENCSST--DLDHGVMVVGYGTDEQGGDYWL 305

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WGD GY KM   K N CGIA+ ASYP+V
Sbjct: 306 VKNSWGRTWGDLGYIKMARNKNNHCGIASSASYPLV 341


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 142/217 (65%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    I+PVKDQG CG CW FS+TG+LE    +  GK +SL EQ L+DC+  + N
Sbjct: 120 ESVDWREKGAITPVKDQGQCGPCWAFSSTGALEGQTFRKTGKLVSLREQNLIDCSGKYGN 179

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL  QAF+YIK N G+DTE  YPY  +D VC+++  N G      V+I  G ED+
Sbjct: 180 EGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDDVCRYNPRNRGAVDRGFVDIPSGEEDK 239

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V PVSVA +   + F+FY  GVY    C +   D++H V+ VGYG ++G  YW
Sbjct: 240 LKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCDSD--DLDHGVLVVGYGSDNGKDYW 297

Query: 278 LIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           L+KNSW E+WGD GY K+    KN CG+AT ASYP+V
Sbjct: 298 LVKNSWSEHWGDQGYIKIARNRKNHCGVATAASYPLV 334


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 141/216 (65%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  GK +SLSEQ LVDC+  + N G
Sbjct: 131 IDWREKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF+Y+K N G+DTE+AYPY   D  C ++ + +G      V+I  G E  L+
Sbjct: 191 CNGGLMDNAFQYVKDNKGIDTEKAYPYEAIDDECHYNPKAIGATDKGFVDIPQGDEKALK 250

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWL 278
            A+  V PVSVA +   + F+FY  GVY   +C +  +D  H V+AVGYG  EDG  YWL
Sbjct: 251 KALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLD--HGVLAVGYGTTEDGEDYWL 308

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WGD GY KM   + N CGIAT ASYP+V
Sbjct: 309 VKNSWGTTWGDQGYVKMARNRENHCGIATTASYPLV 344


>gi|118373972|ref|XP_001020178.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89301945|gb|EAR99933.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 339

 Score =  219 bits (559), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 101/206 (49%), Positives = 139/206 (67%), Gaps = 3/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG-ISLSEQQLVDCAQAFNNQGCNGGLPS 167
           ++ VK+QG CGSCW F+  G++E+ +    GK  I LSEQQL+DCA+ F+N GC+GGLPS
Sbjct: 135 VTAVKNQGECGSCWAFAAVGAIESHFSLKTGKSPIQLSEQQLIDCARQFDNHGCDGGLPS 194

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           +AFEYI Y GG++  + YPYTGK+  C+F  EN+  +V  S NIT   E EL + +    
Sbjct: 195 KAFEYIAYEGGIENSKDYPYTGKNNKCQFDGENIVTKVKQSFNITYLDEKELIYHLVHKG 254

Query: 228 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           PV++A+E  D F  Y+SG+Y    C   P  VNHAV+AVGY       Y+++KNSWG+ W
Sbjct: 255 PVTLAYEAADEFDNYQSGIYEGKNCEQDPQKVNHAVLAVGYNKTG--DYYIVKNSWGDKW 312

Query: 288 GDHGYFKMEMGKNMCGIATCASYPVV 313
           G +GYF +   KN CG+A+CASYP++
Sbjct: 313 GMNGYFYIRANKNACGLASCASYPII 338


>gi|32394728|gb|AAM96000.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 322

 Score =  219 bits (559), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 114/227 (50%), Positives = 145/227 (63%), Gaps = 5/227 (2%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           L+    T  K + +R    ++PVKDQ  CGSCW FSTTGSLE  +    GK +SLSEQ L
Sbjct: 98  LEADDETLPKHVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNL 157

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC+  F N GC GGL  QAF+YIK N G+DTEE+YPY  +DG C+F S NVG      V
Sbjct: 158 VDCSGKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPYEAQDGKCRFDSSNVGATDTGFV 217

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           +I  G E+ L  AV  + P+SVA +     F+FY  GVY   +C +T +D  H V+A+GY
Sbjct: 218 DIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECSSTMLD--HGVLAIGY 275

Query: 269 G-VEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  +DG  YWL+KNSW  +WGD G+ +M    KN CGIA+ ASYP+V
Sbjct: 276 GETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIASQASYPLV 322


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 171/321 (53%), Gaps = 59/321 (18%)

Query: 48  SVLQVIGQARHALSFARFAR----RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSY 103
           +VL +IG    A++ A   R    +YGK Y S+ E  +R   + +N D +   N    S+
Sbjct: 11  AVLLLIGLVSAAVNDAEEWRLWKGKYGKTYRSIYEDNMRQKIWLQNRDYVNEHNSMDSSF 70

Query: 104 RLGLN--------------------------------------------------ISPVK 113
           +L +N                                                  ++PVK
Sbjct: 71  QLEVNEFADLTAEEFSSIYNGYGKGRNRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVK 130

Query: 114 DQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 173
           +Q  CGSCW FSTTGSLE A+ +  GK +SLSEQ LVDC +   + GC GGL + AF+YI
Sbjct: 131 NQKQCGSCWAFSTTGSLEGAHAKKTGKLVSLSEQNLVDCDK--KDHGCQGGLMTTAFKYI 188

Query: 174 KYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233
           + N G+DTEE+YPY  K+G C+F  +++G  V   V+I     + L+ AV  + P+SVA 
Sbjct: 189 EENKGIDTEESYPYKAKNGRCEFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAM 248

Query: 234 EVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGY 292
           +     F+ YKSG+Y    C +  +D  H V+ VGYG EDG  YWL+KNSWG+NWG  GY
Sbjct: 249 DASHSSFQLYKSGIYDPKICSSRKLD--HGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGY 306

Query: 293 FKMEMGKNMCGIATCASYPVV 313
           FK+   KN+CGI T A YPVV
Sbjct: 307 FKIASKKNLCGICTSACYPVV 327


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 141/216 (65%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FSTTG+LE  + +  G  +SLSEQ LVDC+  + N G
Sbjct: 117 VDWRTEGYVTPVKNQGVCGSCWAFSTTGALEGQHFRRSGDLVSLSEQMLVDCSAVYGNAG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF +IK  GGL+TE++YPYTGKDG C F +  +G ++   V++    E+ L+
Sbjct: 177 CNGGLMDNAFRFIKDAGGLETEKSYPYTGKDGTCHFDARGIGAKLTGFVDVPSRDEEALK 236

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWL 278
            A G+V PVSVA +     F+FYK GVY    C +T +D  H V+ VGYG   DG  YWL
Sbjct: 237 EAAGVVGPVSVAIDASGQNFQFYKDGVYDEITCSSTSLD--HGVLVVGYGTTRDGKDYWL 294

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG +WG  GY +M   K N CGIAT ASYP V
Sbjct: 295 VKNSWGSSWGQSGYIQMSRNKENQCGIATMASYPTV 330


>gi|32394730|gb|AAM96001.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 306

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/227 (50%), Positives = 145/227 (63%), Gaps = 5/227 (2%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           L+    T  K + +R    ++PVKDQ  CGSCW FSTTGSLE  +    GK +SLSEQ L
Sbjct: 82  LEADDETLPKHVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNL 141

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC+  F N GC GGL  QAF+YIK N G+DTEE+YPY  +DG C+F S NVG      V
Sbjct: 142 VDCSGKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPYEAQDGKCRFDSSNVGATDTGFV 201

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           +I  G E+ L  AV  + P+SVA +     F+FY  GVY   +C +T +D  H V+A+GY
Sbjct: 202 DIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECSSTMLD--HGVLAIGY 259

Query: 269 G-VEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  +DG  YWL+KNSW  +WGD G+ +M    KN CGIA+ ASYP+V
Sbjct: 260 GETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIASQASYPLV 306


>gi|340727787|ref|XP_003402217.1| PREDICTED: cathepsin L-like [Bombus terrestris]
          Length = 343

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 145/218 (66%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  G  I LSEQ L+DC+  + N
Sbjct: 124 KTVDWREHGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGILIPLSEQNLIDCSGKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL  QAF+YIK N GLDTE  YPY  ++  C++++ N G + +  V+I  G E +
Sbjct: 184 NGCNGGLMDQAFQYIKDNKGLDTEVTYPYEAENDKCRYNAANSGARDVGYVDIPQGNEKK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ AV  + PVSVA +     F+FY  GVY   +C +  +D  H V+AVGYG  E+G  Y
Sbjct: 244 LKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSENLD--HGVLAVGYGTDENGQDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE WGD+GY KM   K N CGIA+ ASYP+V
Sbjct: 302 WLVKNSWGETWGDNGYIKMARNKLNHCGIASTASYPLV 339


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/209 (51%), Positives = 142/209 (67%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQGHCGSCW+FS TG+LE  + +   K +SLSEQ LVDC+  F N GCNGGL   
Sbjct: 132 VTPVKDQGHCGSCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSRFGNNGCNGGLMDN 191

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE AYPY G+D   ++S++N G      V+I  G ED+L+ AV  V P
Sbjct: 192 AFRYIKNNGGIDTEAAYPYMGEDEKFRYSAKNRGATDKGFVDIPSGDEDKLKAAVATVGP 251

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED--GVPYWLIKNSWGE 285
           +S+A +   + F+ Y +GVYS   C +T +D  H V+ VGYG ++  G+ YWL+KNSWG+
Sbjct: 252 ISIAIDASHESFQLYSNGVYSDPTCSSTELD--HGVLVVGYGTDEKTGMDYWLVKNSWGD 309

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WG  GY KM   + N CG+AT ASYP+V
Sbjct: 310 TWGLDGYIKMARNQDNQCGVATQASYPLV 338


>gi|33242880|gb|AAQ01144.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/221 (51%), Positives = 141/221 (63%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YIK NGGLDTEE+YPYT  D   CKF + +VG  ++   ++    E 
Sbjct: 176 QGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDKPCKFDNSSVGATLIGYKDVKSSNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+ VGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLVVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG NWGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPNWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|350412176|ref|XP_003489564.1| PREDICTED: cathepsin L-like [Bombus impatiens]
          Length = 343

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 145/218 (66%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  G  I LSEQ L+DC+  + N
Sbjct: 124 KTVDWREHGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGILIPLSEQNLIDCSGKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL  QAF+YIK N GLDTE  YPY  ++  C++++ N G + +  V+I  G E +
Sbjct: 184 NGCNGGLMDQAFQYIKDNKGLDTEVTYPYEAENDKCRYNAANSGARDVGYVDIPQGNEKK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ AV  + PVSVA +     F+FY  GVY   +C +  +D  H V+AVGYG  E+G  Y
Sbjct: 244 LKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSENLD--HGVLAVGYGTDENGQDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE WGD+GY KM   K N CGIA+ ASYP+V
Sbjct: 302 WLVKNSWGETWGDNGYIKMARNKLNHCGIASTASYPLV 339


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 165/321 (51%), Gaps = 58/321 (18%)

Query: 49  VLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYR 104
           VL  +  A +AL +  +  +YGK Y    E  LR   +  NL +++  N        +YR
Sbjct: 6   VLLALVVAANALDWESWKGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYR 65

Query: 105 LGLN--------------------------------------------------ISPVKD 114
           LG+N                                                  ++PVKD
Sbjct: 66  LGMNTYADLYNEEFMALKGSGGLLQAKDKSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKD 125

Query: 115 QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 174
           QG CGSCWTFS TGSLE  +    G  +SLSEQQLVDCA  + N GCNGGL   A++YIK
Sbjct: 126 QGQCGSCWTFSATGSLEGQHFAKTGNLLSLSEQQLVDCAGRYGNYGCNGGLMESAYDYIK 185

Query: 175 YNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 234
             GG++ E AYPYT +DG CKF    V       V I +G E  L  AVG + PV+V+ +
Sbjct: 186 GVGGVELESAYPYTARDGRCKFDRSKVVATCKGYVVIPVGDEQALMQAVGTIGPVAVSID 245

Query: 235 VVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYF 293
                F+ Y+SGVY   +C +T +D  H V+AVGYG E G  YWL+KNSWG  WGD GY 
Sbjct: 246 ASGYSFQLYESGVYDFRRCSSTNLD--HGVLAVGYGTEGGQNYWLVKNSWGPGWGDQGYI 303

Query: 294 KMEMGK-NMCGIATCASYPVV 313
           KM   K N CGIAT + YP+V
Sbjct: 304 KMSKDKNNQCGIATDSCYPLV 324


>gi|229367042|gb|ACQ58501.1| Cathepsin L precursor [Anoplopoma fimbria]
          Length = 334

 Score =  219 bits (557), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 106/207 (51%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FSTTGSLE    +  GK +SLSEQQLVDC+  + N+GC GGL   
Sbjct: 130 VTEVKDQKQCGSCWAFSTTGSLEGQTFRKTGKLVSLSEQQLVDCSGDYGNEGCMGGLMDS 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YI+ NGG+DTE++YPY  +DG C+++S N+G      V++  G ED L+ AV  + P
Sbjct: 190 AFRYIQANGGIDTEDSYPYEAEDGQCRYNSANIGATCTGYVDVKQGDEDALKEAVATIGP 249

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+ Y+SGVY   +C ++ +D  H V+AVGYG ++G  YWL+KNSWG  W
Sbjct: 250 VSVAIDASHSSFQLYESGVYDEPECSSSELD--HGVLAVGYGSDNGHDYWLVKNSWGLGW 307

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY  M   K N CGIAT +SYP+V
Sbjct: 308 GNKGYIMMTRNKHNQCGIATASSYPLV 334


>gi|164420679|ref|NP_001037464.2| fibroinase precursor [Bombyx mori]
 gi|40556818|gb|AAR87763.1| fibroinase precursor [Bombyx mori]
          Length = 341

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 194/343 (56%), Gaps = 46/343 (13%)

Query: 12  ILLLCCAAAASASASSFD----DSNPIRLVSSDGLRDFETSV-----LQVIGQARHAL-- 60
           ++LL CA AA ++   FD    + +  +L       ++E+ V     +++  + +H +  
Sbjct: 4   LVLLLCAVAAVSAVQFFDLVKEEWSAFKLQHR---LNYESEVEDNFRMKIYAEHKHIIAK 60

Query: 61  ----------SFARFARRYGKI--YESVEEMK--LRFATFSKNL----------DLIRST 96
                     S+     +YG +  +E V+ M    + A  +KNL            I   
Sbjct: 61  HNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPA 120

Query: 97  NCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 153
           N K    + +R    ++ +KDQG CGSCW+FSTTG+LE  + +  G  +SLSEQ L+DC+
Sbjct: 121 NVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCS 180

Query: 154 QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITL 213
           + + N GCNGGL   AF+YIK NGG+DTE+ YPY G D  C+++ +N G + +  V+I  
Sbjct: 181 EQYGNNGCNGGLMDNAFKYIKDNGGIDTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPE 240

Query: 214 GAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-E 271
           G E +L  AV  V PVSVA +     F+ Y SGVY+  +C +T  D++H V+ VGYG  E
Sbjct: 241 GDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSST--DLDHGVLVVGYGTDE 298

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            GV YWL+KNSWG +WG+ GY KM   K N CGIA+ ASYP+V
Sbjct: 299 QGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGIASSASYPLV 341


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 141/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  GK +SLSEQ LVDC+  + N
Sbjct: 125 KTVDWREKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGN 184

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGG+   AF+YIK NGG+DTE+AYPY   D  C ++ + VG      V+I  G E  
Sbjct: 185 NGCNGGMMDFAFQYIKDNGGIDTEKAYPYEAIDDTCHYNPKAVGATDKGFVDIPQGDEKA 244

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L  A+    PVSVA +   + F+FY  GVY   +C +  +D  H V+AVGYG  E+G  Y
Sbjct: 245 LMKAIATAGPVSVAIDASHESFQFYSEGVYYEPQCDSENLD--HGVLAVGYGTSEEGEDY 302

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD GY KM   + N CGIAT ASYP+V
Sbjct: 303 WLVKNSWGTTWGDQGYVKMARNRDNHCGIATAASYPLV 340


>gi|89272015|emb|CAJ83143.1| cathepsin L2 [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 175/294 (59%), Gaps = 22/294 (7%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFARRYGKIYESV-----EEMKLRFATF-- 86
           R++    LR  E   L+  +G+  H+L   +F     + +  +      + K+R +TF  
Sbjct: 49  RVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMTNEEFRQLMNGYKNQKKIRGSTFLA 108

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
             N +  +S + +   Y     ++PVKDQG CGSCW FSTTG+LE  +++  GK ISLSE
Sbjct: 109 PNNFESPKSVDWRKKGY-----VTPVKDQGQCGSCWAFSTTGALEGQHYRNTGKMISLSE 163

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQV 205
           Q LVDC++A  NQGCNGGL  QAF+Y+K NGG+D+E++YPYT KD   C +         
Sbjct: 164 QNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNYNSAND 223

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V++T  +E +L +AV  V PVSVA +     F+FYKSG+Y   +C  +  D++H V+
Sbjct: 224 TGFVDVTSESEKDLMNAVASVGPVSVAVDAGHQSFQFYKSGIYYEPEC--SSEDLDHGVL 281

Query: 265 AVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            VGYG     EDG  YW++KNSW E WG+ GY  +   + N CGIAT ASYP+V
Sbjct: 282 VVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDRHNHCGIATAASYPLV 335


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 163/306 (53%), Gaps = 55/306 (17%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------- 108
           SF +F  +YG+ Y + +E + R + + +N++ I + N +     ++Y L +N        
Sbjct: 21  SFHQFKVQYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMTNE 80

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  ++PVKDQ  CGSCW FS TGS
Sbjct: 81  EINAVMNGLLPASESRGVAVLGGRDDTLPAEVDWRTKGAVTPVKDQKACGSCWAFSATGS 140

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE  +    GK +SLSEQ LVDC+    + GC GGL   AF YIK NGG+DTE +YPY  
Sbjct: 141 LEGQHFLKDGKLVSLSEQNLVDCSTKQGDHGCGGGLMDFAFTYIKDNGGIDTEASYPYEA 200

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYS 248
            DG C+++  N G  V   V++   +ED LQ AV  + P+SVA +     F FY  GVY 
Sbjct: 201 TDGKCQYNPANSGATVTGYVDVEHDSEDALQKAVATIGPISVAIDASRSTFHFYHKGVYY 260

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
             +C +T +D  H V+AVGYG +DG  YWL+KNSW   WG+HG+ +M   + N CGIAT 
Sbjct: 261 DKECSSTSLD--HGVLAVGYGTQDGTDYWLVKNSWNITWGNHGFIEMSRNRNNNCGIATQ 318

Query: 308 ASYPVV 313
           ASYP+V
Sbjct: 319 ASYPLV 324


>gi|33242870|gb|AAQ01139.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/221 (51%), Positives = 142/221 (64%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CGSCW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YI  NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 176 QGCGGGLMDQAFQYITANGGLDTEESYPYTATDDEPCKFDNSSVGATLVGYKDVKSGNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+AVGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLAVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG +WGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 143/218 (65%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++P+KDQG CGSCW FS TG+LE    +  G+ +SLSEQ LVDC++ F N
Sbjct: 126 KNVDWRTKGAVTPIKDQGQCGSCWAFSATGALEGQTFRKTGQLVSLSEQNLVDCSRKFGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AFEY+K NGG+DTEE+YPY  +D  C ++    G +    V++  G+E  
Sbjct: 186 NGCNGGLMDNAFEYVKENGGIDTEESYPYDAEDEKCHYNPRAAGAEDKGFVDVREGSEHA 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ AV  V PVSVA +   + F+FY  GVY   +C  +P  ++H V+ VGYG+ +DG  Y
Sbjct: 246 LKKAVATVGPVSVAIDASHESFQFYSHGVYIEPEC--SPEMLDHGVLVVGYGIDDDGTDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD GY KM   + N CGIA+ AS+P+V
Sbjct: 304 WLVKNSWGTTWGDQGYVKMARNRDNQCGIASSASFPLV 341


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 182/364 (50%), Gaps = 69/364 (18%)

Query: 10  SVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQAR---HALSFARFA 66
           +VI +L   +AA  + + F+   P ++  +  L+      LQV    R   +  ++  F 
Sbjct: 6   AVICVLTVVSAAPQAVNWFE-IQPAKVEHASNLK------LQVKASTRLGPYHETWKEFK 58

Query: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------------- 108
             +GK+Y++VEE   RF  F   L+ I   N K      SY +G+N              
Sbjct: 59  TLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQFSDMSHDEYLRHN 118

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVK+QG CGSCW+FSTTGSLE 
Sbjct: 119 GLRRGNRKYSKGEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQCGSCWSFSTTGSLEG 178

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            + +  GK ISLSEQQLVDC+  F N+GCNGGL   AFEYIK  GGL+ E+ YPYT K G
Sbjct: 179 QHFRQTGKLISLSEQQLVDCSGTFGNEGCNGGLMDNAFEYIKSIGGLEGEDDYPYTAKQG 238

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTK 251
            C               ++  G ED L+ A+  V P+SVA +     F+ Y  GVY   +
Sbjct: 239 KCHLKKSLFKANDTGCTDVESGDEDALKDALASVGPISVAIDASHASFQSYDGGVYDEEE 298

Query: 252 CGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCAS 309
           C +  +D  H V+ VGYG E+ G  YWL+KNSWGE WG+ GY KM   K N CGIAT AS
Sbjct: 299 CSSQNLD--HGVLTVGYGTEENGGDYWLVKNSWGEMWGEEGYIKMSRNKDNQCGIATQAS 356

Query: 310 YPVV 313
           YP V
Sbjct: 357 YPNV 360


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 112/256 (43%), Positives = 155/256 (60%), Gaps = 7/256 (2%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L+   F + Y     S+++   + +TF   L+    T    + +R    ++P+K+QG CG
Sbjct: 75  LTRKEFVKTYNGYRLSMKKSTNKPSTFMAPLNTNMPTE---VDWRKEGYVTPIKNQGRCG 131

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FSTTGSLE  + +  GK +SLSEQ L+DC+ A  N GC GG    AFEYIK N G+
Sbjct: 132 SCWAFSTTGSLEGQHFRKTGKLVSLSEQNLIDCSAAEGNDGCGGGFMDDAFEYIKLNNGI 191

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DG 238
           DTE +YPY G+D +C++   N G      ++I   +ED+L+ AV  V P+SVA +     
Sbjct: 192 DTEASYPYEGRDDICRYKKTNKGAIDTGYMDIKQYSEDDLKAAVATVGPISVAIDASHKS 251

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y +GVY   +C  T +D  H V+ VGYG E+G  YWL+KNSWG +WG +GY KM   
Sbjct: 252 FHMYHTGVYHEPECSQTVLD--HGVLVVGYGTENGEDYWLVKNSWGTDWGMNGYIKMSRN 309

Query: 299 K-NMCGIATCASYPVV 313
           + N CGIAT ASYP++
Sbjct: 310 RSNNCGIATNASYPLI 325


>gi|443708542|gb|ELU03619.1| hypothetical protein CAPTEDRAFT_17807 [Capitella teleta]
          Length = 350

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 107/207 (51%), Positives = 137/207 (66%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FSTTGSLE  + +  GK +SLSEQ LVDC+ ++ N+GCNGG+   
Sbjct: 146 VTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSTSYGNEGCNGGIVDY 205

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G DTE  YPY   DG C+F S  VG       ++  G E +++ AV LV P
Sbjct: 206 AFQYIKDNDGDDTEACYPYEAVDGTCRFKSVCVGATCTGYTDLPKGDEAKMKEAVALVGP 265

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+ Y+SG+Y   +C  +P  ++HAV+ VGYG E G  YWL+KNSWG  W
Sbjct: 266 VSVAIDASHSSFQMYQSGIYVEQEC--SPKQLDHAVLVVGYGTEQGQDYWLVKNSWGTTW 323

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           GD GY KM     N CGIA+ ASYP+V
Sbjct: 324 GDEGYIKMARNMDNQCGIASQASYPLV 350


>gi|229366214|gb|ACQ58087.1| Cathepsin L precursor [Anoplopoma fimbria]
          Length = 334

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 140/207 (67%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FSTTGSLE    +  GK +SLSEQQLVDC+  + N+GC GGL   
Sbjct: 130 VTDVKDQKQCGSCWAFSTTGSLEGQTFRKTGKLVSLSEQQLVDCSGDYGNEGCMGGLMDS 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YI+ NGG+DTE++YPY  +DG C+++S N+G      V++  G ED L+ A+  + P
Sbjct: 190 AFRYIQANGGIDTEDSYPYEAEDGQCRYNSANIGATCTGYVDVKQGDEDALKEALATIGP 249

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+ Y+SGVY   +C ++ +D  H V+AVGYG ++G  YWL+KNSWG  W
Sbjct: 250 VSVAIDASHSSFQLYESGVYDEPECSSSELD--HGVLAVGYGSDNGHDYWLVKNSWGLGW 307

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY  M   K N CGIAT +SYP+V
Sbjct: 308 GNKGYIMMTRNKHNQCGIATASSYPLV 334


>gi|156398078|ref|XP_001638016.1| predicted protein [Nematostella vectensis]
 gi|156225133|gb|EDO45953.1| predicted protein [Nematostella vectensis]
          Length = 326

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/296 (40%), Positives = 161/296 (54%), Gaps = 54/296 (18%)

Query: 69  YGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------------- 108
           +GK Y  V E + R A + +NL+ I+  N +  SY++ +N                    
Sbjct: 34  HGKSYSDVHEERTRMAIWQQNLEKIKRHNAEDHSYKMAMNHLGDLTEDEFRYFYLGVRAH 93

Query: 109 ------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
                                         ++ VK+QG CGSCW FSTTGS+E  + +  
Sbjct: 94  HNSTKRGWATYMPPSNVKIPSSVDWSQKGYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKT 153

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           G  +SLSEQ L+DC+ ++ N GC GGL   AF YI+ NGG+DTE +YPY G+ G C FSS
Sbjct: 154 GSLVSLSEQNLIDCSGSYGNNGCQGGLMDNAFRYIESNGGIDTESSYPYLGQQGSCHFSS 213

Query: 199 ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMD 258
            +VG +V    +I  G+E  LQ AV  V PVSVA +    ++FY SGVY +  C +T +D
Sbjct: 214 SHVGARVTGYQDIPQGSEQALQSAVATVGPVSVAVDASQ-WQFYSSGVYDNPYCSSTQLD 272

Query: 259 VNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             H V+ +GYG  +G  YWL+KNSWG +WG  GY  M   K N CGIA+ ASYP+V
Sbjct: 273 --HGVLVIGYGNYNGQDYWLVKNSWGYSWGVEGYIMMSRNKNNQCGIASSASYPLV 326


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/239 (47%), Positives = 149/239 (62%), Gaps = 8/239 (3%)

Query: 81  LRFATFSKNLDLIRSTNC---KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQA 137
           LR     +++  I   N    K + +R    ++PVKDQG CGSCW+FSTTGSLE  + + 
Sbjct: 101 LRSGELDESITFIPPANVELPKQIDWRKLGAVTPVKDQGQCGSCWSFSTTGSLEGQHFRK 160

Query: 138 FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 197
             K +SLSEQ L+DC++ + N GCNGGL   AF YIK NGG+DTE++YPY  +D  C + 
Sbjct: 161 SKKLVSLSEQNLIDCSEKYGNNGCNGGLMDNAFRYIKDNGGIDTEQSYPYKAEDEKCHYK 220

Query: 198 SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTP 256
             N G      V+I  G E++L+ AV  V P+SVA +     F+ Y  GVY   +C +  
Sbjct: 221 PRNKGATDRGFVDIESGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGVYYEPECSSEQ 280

Query: 257 MDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +D  H V+ VGYG  EDG  YWL+KNSWG++WGD GY KM   + N CGIAT ASYP+V
Sbjct: 281 LD--HGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQGYIKMARNRDNNCGIATQASYPLV 337


>gi|957281|gb|AAB33990.1| cysteine proteinase [Bombyx mori]
          Length = 344

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 147/216 (68%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ +KDQG CGSCW+FSTTG+LE  + +  G  +SLSEQ L+DC++ + N G
Sbjct: 131 VDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF+YIK NGG+DTE+AYPY G D  C+++ +N G + +  V+I  G E +L 
Sbjct: 191 CNGGLMDNAFKYIKDNGGIDTEQAYPYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLM 250

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            AV  V PVSVA +     F+ Y SGVY+  +C +T  D++H V+ VGYG  E GV YWL
Sbjct: 251 EAVATVGPVSVAIDASHTHFQLYSSGVYNEEECSST--DLDHGVLVVGYGTDEQGVDYWL 308

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG +WG+ GY KM   K N CGIA+ ASYP+V
Sbjct: 309 VKNSWGRSWGELGYIKMIRNKNNRCGIASSASYPLV 344


>gi|262410743|gb|ACY66807.1| cathepsin L [Aphis gossypii]
          Length = 341

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 108/228 (47%), Positives = 149/228 (65%), Gaps = 8/228 (3%)

Query: 92  LIRSTNC---KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
            ++S N    K + +R    ++PVK+QG CGSCW+FS TGSLE  + +  G  +SLSEQ 
Sbjct: 116 FLKSENVVVPKAIDWRKKGYVTPVKNQGQCGSCWSFSATGSLEGQHFRKTGVLVSLSEQN 175

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           L+DC++ + N GC GGL   AF+YIK N GLDTE++YPY  +D  C+++ EN G      
Sbjct: 176 LIDCSRKYGNNGCEGGLMDLAFKYIKSNKGLDTEKSYPYEAEDDKCRYNPENSGATDKGF 235

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           V+I  G ED L HA+  V PVS+A +   + F+FYK GV+ + +C +T +D  H V+AVG
Sbjct: 236 VDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCSSTELD--HGVLAVG 293

Query: 268 YGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           YG +  G  YW++KNSWG+ WGD GY  M    KN CG+A+ ASYP+V
Sbjct: 294 YGTDHKGGDYWIVKNSWGKTWGDQGYIMMARNKKNNCGVASSASYPLV 341


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 110/231 (47%), Positives = 149/231 (64%), Gaps = 9/231 (3%)

Query: 92  LIRSTNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
            IRS + K    + +R    ++ VK+QG CGSCW FSTTG++E  +++   + ++LSEQQ
Sbjct: 140 FIRSEHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQ 199

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV----CKFSSENVGVQ 204
           LVDC++++ N GC+GGL + AFEY++ N G+D+E +YPY   DG     C F++ N+  Q
Sbjct: 200 LVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQ 259

Query: 205 VLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAV 263
           V   VNI  G E  L  AV    PVSVA    +  F  YKSG+YS T C  T   ++H V
Sbjct: 260 VTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGV 319

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           + VGYG E+G  YWLIKNSWGE WG+ GY K+  G  NMCG+A+ ASYP+V
Sbjct: 320 LVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  217 bits (553), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 105/217 (48%), Positives = 142/217 (65%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW+FS TGSLE       G+ +SLSEQ LVDC++ + N
Sbjct: 102 KSVDWRQRGAVTPVKDQGHCGSCWSFSATGSLEGQLFLKTGRLVSLSEQNLVDCSKTYGN 161

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL +QAF+Y++ N G+DTE +YPY  ++  C+F  + VG      V+I   +E +
Sbjct: 162 SGCEGGLMNQAFQYVRDNKGIDTEASYPYEARENNCRFKEDKVGGTDKGYVDILEASEKD 221

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           LQ AV  V P+SV  +   + F+FY  GVY    C  +P  ++H V+ VGYG E+G  YW
Sbjct: 222 LQSAVATVGPISVRIDASHESFQFYSEGVYKEQYC--SPSQLDHGVLTVGYGTENGQDYW 279

Query: 278 LIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           L+KNSWG +WG+ GY K+    KN CGIA+ ASYPVV
Sbjct: 280 LVKNSWGPSWGESGYIKIARNHKNHCGIASMASYPVV 316


>gi|195381187|ref|XP_002049336.1| GJ20806 [Drosophila virilis]
 gi|194144133|gb|EDW60529.1| GJ20806 [Drosophila virilis]
          Length = 339

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 140/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  ISLSEQ LVDC+  + N
Sbjct: 124 KSVDWRSKGAVTEVKDQGHCGSCWAFSSTGALEGQHFRKAGTLISLSEQNLVDCSTKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY G D  C F+   +G     SV+I  G E +
Sbjct: 184 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDRGSVDIPQGDEKK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  + PVSVA +   + F+FY  G+Y+  +C   P +++H V+ VGYG  E G  Y
Sbjct: 244 MAEAVATIGPVSVAIDASHESFQFYSEGIYNEPQC--DPQNLDHGVLVVGYGTDESGQDY 301

Query: 277 WLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM     N CGIA+ +SYP+V
Sbjct: 302 WLVKNSWGTTWGDKGFIKMARNADNQCGIASASSYPLV 339


>gi|318816588|ref|NP_001187996.1| cathepsin L precursor [Ictalurus punctatus]
 gi|308324547|gb|ADO29408.1| cathepsin L [Ictalurus punctatus]
          Length = 334

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 165/313 (52%), Gaps = 61/313 (19%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN------- 108
           L F  +  ++GKIY+SVEE   R  T+ +N  L+   N    +G+ SYRLG+        
Sbjct: 24  LEFHSWKLKFGKIYKSVEEESQRKNTWLENRKLVLVHNMLADQGIKSYRLGMTYFADMDN 83

Query: 109 ----------------------------------------------ISPVKDQGHCGSCW 122
                                                         ++ VKDQ +CGSCW
Sbjct: 84  QEYRQSVFKGCLGSFNRTKGHRASTFLLQAGGAVLPDTVDWRDKGYVAEVKDQKNCGSCW 143

Query: 123 TFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182
            FS TGSLE    +  GK +SLSEQQLVDC+  + N GC GGL   AFEYI+ N G+DTE
Sbjct: 144 AFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGKYGNMGCGGGLMDLAFEYIEDNKGIDTE 203

Query: 183 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRF 241
           E+YPY   DG C+F    VG      V+I    E+ LQ AV  + P+SVA +     F+ 
Sbjct: 204 ESYPYEATDGDCRFKPATVGATCTGYVDINSEDENALQKAVANIGPISVAIDAGHISFQL 263

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-N 300
           Y SG+Y+   C  +  D++H V+AVGYG ++   YWL+KNSWG +WGD GY KM   K N
Sbjct: 264 YGSGIYNEPNC--SSEDLDHGVLAVGYGTDNQQDYWLVKNSWGLDWGDQGYIKMTRNKNN 321

Query: 301 MCGIATCASYPVV 313
            CGIAT ASYP+V
Sbjct: 322 QCGIATAASYPLV 334


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 140/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQ  CGSCW FSTTGSLE  +    GK +SLSEQ LVDC+  F N
Sbjct: 113 KEVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGN 172

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL  QAF YIK N G+DTE++YPY  +DG C+F + NVG      V++  G+E  
Sbjct: 173 MGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDGKCRFDASNVGATDTGYVDVEHGSESA 232

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPY 276
           L+ AV  + P+SVA +     F+FY  GVY    C +T +D  H V+AVGYG  E G  Y
Sbjct: 233 LKKAVATIGPISVAIDASQPSFQFYHDGVYYEEGCSSTMLD--HGVLAVGYGETEKGEAY 290

Query: 277 WLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WL+KNSW  +WG+ GY +M    KN CGIA+ ASYP+V
Sbjct: 291 WLVKNSWNTSWGNKGYIQMSRDKKNNCGIASQASYPLV 328


>gi|410923307|ref|XP_003975123.1| PREDICTED: cathepsin L1-like [Takifugu rubripes]
          Length = 336

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 184/339 (54%), Gaps = 43/339 (12%)

Query: 11  VILLLCCAAAASASA--SSFDDSNPI-----------------RLVSSDGLRDFETSVLQ 51
           V+L LC  AA SA +     D+   +                 R+V    L+  E   L+
Sbjct: 5   VVLALCVTAALSAPSLDPQLDEHWNLWKDWHSKKYHEKEEGWRRMVWEKNLKKIELHNLE 64

Query: 52  -VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATFSKN--LDLIRSTNCKGL 101
             +G+  ++L    F        R+    Y+   + KLR + F +   L+  RS + +  
Sbjct: 65  HSMGKHTYSLGMNHFGDMTHEEFRQIMNGYKLKSQRKLRGSLFMEPNFLEAPRSVDWRDK 124

Query: 102 SYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGC 161
            Y     ++PVKDQG CGSCW FSTTG++E  + +  G  +SLSEQ LVDC++   N+GC
Sbjct: 125 GY-----VTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGTLVSLSEQNLVDCSRPEGNEGC 179

Query: 162 NGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           NGGL  QAF+YIK NGGLD+EE+YPY G D G C +            V++  G+E  L 
Sbjct: 180 NGGLMDQAFQYIKDNGGLDSEESYPYLGTDEGPCHYDPSYNSANDTGFVDVPSGSERALM 239

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVP 275
            AV  V PVSVA +   + F+FY SG+Y   +C +  +D  H V+ VGYG E    DG  
Sbjct: 240 KAVASVGPVSVAIDAGHESFQFYHSGIYYDKECSSEELD--HGVLVVGYGFEGKDVDGKK 297

Query: 276 YWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           YW++KNSW ENWGD GY  M +  KN CGIAT ASYP+V
Sbjct: 298 YWIVKNSWSENWGDKGYIYMAKDKKNHCGIATAASYPLV 336


>gi|348531523|ref|XP_003453258.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 341

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 142/207 (68%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ V++Q  CGSCW FS TGSLE  + +  GK +SLS+QQLVDC+  F N+GCNGGL   
Sbjct: 137 VTNVQNQMDCGSCWAFSATGSLEGQHFRKTGKLVSLSKQQLVDCSGEFGNEGCNGGLMDS 196

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+ NGG+DTEE+YPY  +DG C+++ ++ G      V++    E+ L+ AV  + P
Sbjct: 197 AFQYIQANGGIDTEESYPYEAEDGKCRYNPKSTGATCTGYVDVQPANEETLKEAVATIGP 256

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FY+SGVY    C +T +D  HAV+AVGYG E+G+ YWL+KNS G  W
Sbjct: 257 ISVAIDAFHPSFQFYESGVYDEPDCSSTMLD--HAVLAVGYGTENGLDYWLVKNSAGVGW 314

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY KM   K N CGIAT ASYP+V
Sbjct: 315 GEKGYIKMSRNKSNQCGIATAASYPLV 341


>gi|307192137|gb|EFN75465.1| Cathepsin L [Harpegnathos saltator]
          Length = 339

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 106/216 (49%), Positives = 143/216 (66%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+KDQGHCGSCW+FS TG+LE  +++  GK +SLSEQ L+DC+  + N G
Sbjct: 126 VDWRTHGAVTPIKDQGHCGSCWSFSATGALEGQHYRITGKLVSLSEQNLIDCSGRYGNNG 185

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL  QAF+YIK N GLDTE +YPY  ++  C+++  N G      V+I  G E +L+
Sbjct: 186 CNGGLMDQAFQYIKDNHGLDTEISYPYEAENDKCRYNPRNNGATDSGYVDIPEGNEKKLK 245

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG-VPYWL 278
            AV  + PVSVA +   + F+FY+ GVY   +C +  +D  H V+ VGYG +D    YWL
Sbjct: 246 AAVATIGPVSVAIDASAESFQFYREGVYYEPRCSSENLD--HGVLVVGYGTDDNDQDYWL 303

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WGD GY KM   K N CGIA+ ASYP+V
Sbjct: 304 VKNSWGVTWGDEGYIKMARNKDNHCGIASSASYPLV 339


>gi|728637|emb|CAA59441.1| cathepsin l [Litopenaeus vannamei]
          Length = 326

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 161/306 (52%), Gaps = 56/306 (18%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------- 108
           +  F   +G+ Y SV+E + R + F +N   I   N +     +++ L +N         
Sbjct: 23  WQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEE 82

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQ  CGSCW FSTTGSL
Sbjct: 83  IVATMNGFLGAPTRRPAAVLKADDETLPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSL 142

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    GK +SLSEQ LVDC+  F N GC GGL  QAF YIK N G+DTE++YPY  +
Sbjct: 143 EGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQ 202

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSS 249
           DG C+F + NVG      V++  G+E  L+ AV  + P+SV  +     F FY +GVY  
Sbjct: 203 DGKCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHD 262

Query: 250 TKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
             C +T +D  H V+AVGYG  E+G  +WL+KNSW  +WGD GY KM   + N CGIA+ 
Sbjct: 263 DHCSSTMLD--HGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQ 320

Query: 308 ASYPVV 313
           ASYP+V
Sbjct: 321 ASYPLV 326


>gi|405966498|gb|EKC31776.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 134/207 (64%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+K+QG CGSCW+FS TGSLE    +  GK  SLSEQ LVDC+Q   N GC GGL   
Sbjct: 126 VTPIKNQGQCGSCWSFSATGSLEGQTFKKTGKLPSLSEQNLVDCSQKQGNHGCQGGLMDD 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G+DTE +YPY  K+G C+F++ NVG       +I   +E +LQ AV  V P
Sbjct: 186 AFQYIKDNSGIDTESSYPYEAKNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGP 245

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y+SGVY    C  T +D  H V+AVGYG E G  YWL+KNSWGE+W
Sbjct: 246 ISVAIDASHMSFQLYRSGVYHEFFCSETRLD--HGVLAVGYGTESGKDYWLVKNSWGESW 303

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIAT ASYP V
Sbjct: 304 GQKGYIMMSRNKRNNCGIATSASYPTV 330


>gi|2765358|emb|CAA74241.1| cathepsin L [Litopenaeus vannamei]
          Length = 325

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 161/306 (52%), Gaps = 56/306 (18%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------- 108
           +  F   +G+ Y SV+E + R + F +N   I   N +     +++ L +N         
Sbjct: 22  WQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEE 81

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQ  CGSCW FSTTGSL
Sbjct: 82  IVATMNGFLGAPTRRPAAVLKADDETLPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSL 141

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    GK +SLSEQ LVDC+  F N GC GGL  QAF YIK N G+DTE++YPY  +
Sbjct: 142 EGQHFLKDGKLVSLSEQNLVDCSDKFRNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQ 201

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSS 249
           DG C+F + NVG      V++  G+E  L+ AV  + P+SV  +     F FY +GVY  
Sbjct: 202 DGKCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHD 261

Query: 250 TKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
             C +T +D  H V+AVGYG  E+G  +WL+KNSW  +WGD GY KM   + N CGIA+ 
Sbjct: 262 DHCSSTMLD--HGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQ 319

Query: 308 ASYPVV 313
           ASYP+V
Sbjct: 320 ASYPLV 325


>gi|21617827|sp|P09648.1|CATL1_CHICK RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain
          Length = 218

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 111/218 (50%), Positives = 143/218 (65%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++   N
Sbjct: 3   RSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGCNGGL  QAF+Y++ NGG+D+EE+YPYT KD   C++ +E         V+I  G E 
Sbjct: 63  QGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHER 122

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            L  AV  V PVSVA +     F+FY+SG+Y    C  +  D++H V+ VGYG E G  Y
Sbjct: 123 ALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDC--SSEDLDHGVLVVGYGFEGGKKY 180

Query: 277 WLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           W++KNSWGE WGD GY  M    KN CGIAT ASYP+V
Sbjct: 181 WIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 218


>gi|348531585|ref|XP_003453289.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 366

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 136/207 (65%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FSTTG LE  + +  GK +SLSEQQL+DC+ +F N GCNGG   +
Sbjct: 162 VTEVKDQKICGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCSHSFGNNGCNGGSVKR 221

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+ NGG+DTE +YPY  K   C++  + +G +    V +    ED L+ AV  + P
Sbjct: 222 AFQYIQANGGIDTEASYPYEAKGQQCRYKPDGIGAKCTGYVEVKPSNEDALKEAVATIGP 281

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +   + FRFY+SGVY    C  T +  NH V+AVGYG E+G  YWLIKNSWG  W
Sbjct: 282 ISVGIDASHNSFRFYQSGVYDEPDCSKTVL--NHDVLAVGYGTENGHDYWLIKNSWGIRW 339

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   K N CGIA+ A+YP+V
Sbjct: 340 GDKGYIKMSRNKSNQCGIASDATYPLV 366


>gi|405958751|gb|EKC24845.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  216 bits (551), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 134/207 (64%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+K+QG CGSCW+FS TGSLE    +  GK  SLSEQ LVDC+Q   N GC GGL   
Sbjct: 126 VTPIKNQGQCGSCWSFSATGSLEGQTFKKTGKLPSLSEQNLVDCSQKQGNHGCQGGLMDD 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N G+DTE +YPY  K+G C+F++ NVG       +I   +E +LQ AV  V P
Sbjct: 186 AFQYIKDNNGIDTESSYPYEAKNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGP 245

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           ++VA +     F+ YKSGVY    C  T +D  H V+AVGYG E G  YWL+KNSWGE+W
Sbjct: 246 IAVAIDASHMSFQLYKSGVYHEFFCSETRLD--HGVLAVGYGTESGKDYWLVKNSWGESW 303

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIAT ASYP V
Sbjct: 304 GQKGYIMMSRNKRNNCGIATSASYPTV 330


>gi|269784818|ref|NP_001161481.1| cathepsin L1 precursor [Gallus gallus]
          Length = 353

 Score =  216 bits (551), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 119/245 (48%), Positives = 153/245 (62%), Gaps = 16/245 (6%)

Query: 78  EMKLRFATFSKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYH 135
           E K R + F +   L+  RS + +   Y     ++PVKDQG CGSCW FSTTG+LE  + 
Sbjct: 116 ERKYRGSQFLEPSFLEAPRSVDWREKGY-----VTPVKDQGQCGSCWAFSTTGALEGQHF 170

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-C 194
           +  GK +SLSEQ LVDC++   NQGCNGGL  QAF+Y++ NGG+D+EE+YPYT KD   C
Sbjct: 171 RKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDC 230

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
           ++ +E         V+I  G E  L  AV  V PVSVA +     F+FY+SG+Y    C 
Sbjct: 231 RYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCS 290

Query: 254 NTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCA 308
           +   D++H V+ VGYG E    DG  YW++KNSWGE WGD GY  M    KN CGIAT A
Sbjct: 291 SE--DLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAA 348

Query: 309 SYPVV 313
           SYP+V
Sbjct: 349 SYPLV 353


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  216 bits (551), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 106/207 (51%), Positives = 134/207 (64%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+K+QG CGSCW+FS TGSLE    +  GK +SLSEQ LVDC++   N GC GGL   
Sbjct: 126 VTPIKNQGQCGSCWSFSATGSLEGQTFKKTGKLVSLSEQNLVDCSKKQGNHGCEGGLMDD 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK N G+DTE +YPY  +DG C+F S +VG      V+I    E+ L+ AV  V P
Sbjct: 186 AFTYIKANNGIDTEASYPYKARDGKCEFKSADVGATDTGFVDIKTKDEEALKQAVATVGP 245

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y++GVY    C  T +D  H V+AVGYG ED   YWL+KNSWGE+W
Sbjct: 246 ISVAIDASHMSFQLYRTGVYHDWFCSQTKLD--HGVLAVGYGTEDSKDYWLVKNSWGESW 303

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  GY +M    +N CGIAT ASYP V
Sbjct: 304 GQKGYIQMSRNRRNNCGIATSASYPTV 330


>gi|33242882|gb|AAQ01145.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  216 bits (551), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 113/221 (51%), Positives = 141/221 (63%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    +S VKDQG CG CW FSTTGSLE  +    GK + LSEQQLVDC++ F N
Sbjct: 116 KSVDWRNSHMVSEVKDQGECGPCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           QGC GGL  QAF+YI  NGGLDTEE+YPYT  D   CKF + +VG  ++   ++  G E 
Sbjct: 176 QGCGGGLMDQAFQYIPANGGLDTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEH 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG--- 273
            L+ AV  V PVSVA +   + F+FY SGVY   +C    +D  H V+AVGYG  +    
Sbjct: 236 ALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTEQLD--HGVLAVGYGAMNDNSH 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG +WGD GY  M   K N CGIAT ASYP+V
Sbjct: 294 QAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|449275508|gb|EMC84350.1| Cathepsin L1, partial [Columba livia]
          Length = 319

 Score =  216 bits (551), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 119/245 (48%), Positives = 153/245 (62%), Gaps = 16/245 (6%)

Query: 78  EMKLRFATFSKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYH 135
           E K R + F +   L+  RS + +   Y     ++PVKDQG CGSCW FSTTG+LE  + 
Sbjct: 82  ERKYRGSQFLEPSFLEAPRSVDWREKGY-----VTPVKDQGQCGSCWAFSTTGALEGQHF 136

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-C 194
           +  GK +SLSEQ LVDC++   NQGCNGGL  QAF+Y++ NGG+D+EE+YPYT KD   C
Sbjct: 137 RKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDC 196

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
           ++ +E         V+I  G E  L  AV  V PVSVA +     F+FY+SG+Y    C 
Sbjct: 197 RYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDC- 255

Query: 254 NTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCA 308
            +  D++H V+ VGYG E    DG  YW++KNSWGE WGD GY  M    KN CGIAT A
Sbjct: 256 -SSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAA 314

Query: 309 SYPVV 313
           SYP+V
Sbjct: 315 SYPLV 319


>gi|449513868|ref|XP_002191976.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 443

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 119/245 (48%), Positives = 153/245 (62%), Gaps = 16/245 (6%)

Query: 78  EMKLRFATFSKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYH 135
           E K R + F +   L+  RS + +   Y     ++PVKDQG CGSCW FSTTG+LE  + 
Sbjct: 206 ERKYRGSQFLEPNFLEAPRSVDWREKGY-----VTPVKDQGQCGSCWAFSTTGALEGQHF 260

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-C 194
           +  GK +SLSEQ LVDC++   NQGCNGGL  QAF+Y++ NGG+D+EE+YPYT KD   C
Sbjct: 261 RKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDC 320

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
           ++ +E         V+I  G E  L  AV  V PVSVA +     F+FY+SG+Y    C 
Sbjct: 321 RYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDC- 379

Query: 254 NTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCA 308
            +  D++H V+ VGYG E    DG  YW++KNSWGE WGD GY  M    KN CGIAT A
Sbjct: 380 -SSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAA 438

Query: 309 SYPVV 313
           SYP+V
Sbjct: 439 SYPLV 443


>gi|395514296|ref|XP_003761355.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 262

 Score =  216 bits (550), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 114/225 (50%), Positives = 142/225 (63%), Gaps = 7/225 (3%)

Query: 94  RSTNCKGLSYRLG-LNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 152
           R+  C G   + G +  + +KD+G CGSCW FS TGSLE  +    GK +SLSEQ LVDC
Sbjct: 40  RANGCDGRWDQAGSVRDTSIKDKGQCGSCWAFSATGSLEGQWFHKTGKLVSLSEQNLVDC 99

Query: 153 AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT 212
           + A  N GC GGL   AFEY+K NGG+DTEE+YPY GKDG C ++S+  G  V   V+I 
Sbjct: 100 STAQGNSGCQGGLMDNAFEYVKKNGGIDTEESYPYVGKDGTCHYNSQCSGANVTGYVDIP 159

Query: 213 LGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 271
            G E  L  AV  V P+SVA +     F+FY+SGVY   +C +  +D  H V+ VG+GVE
Sbjct: 160 AGVERALAKAVATVGPISVAIDAGHSSFQFYRSGVYYEPECSSEELD--HGVLVVGFGVE 217

Query: 272 --DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             +G  YW++KNSWGE WGD GY  M     N CGIAT ASYP V
Sbjct: 218 GKNGKKYWIVKNSWGEEWGDRGYVLMTRDHNNHCGIATAASYPEV 262


>gi|52630917|gb|AAU84922.1| putative cathepsin L [Toxoptera citricida]
          Length = 341

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/228 (47%), Positives = 149/228 (65%), Gaps = 8/228 (3%)

Query: 92  LIRSTNC---KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
            ++S N    K + +R    ++PVK+QG CGSCW+FS TGSLE  + +  G  +SLSEQ 
Sbjct: 116 FLKSENVVIPKSIDWRKKGYVTPVKNQGQCGSCWSFSATGSLEGQHFRKTGVLVSLSEQN 175

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           L+DC++ + N GC GGL   AF+YIK N GLDTE++YPY  +D  C+++ EN G      
Sbjct: 176 LIDCSRKYGNNGCEGGLMDLAFKYIKSNKGLDTEKSYPYEAEDDKCRYNPENSGATDKGF 235

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           V+I  G ED L HA+  V PVS+A +   + F+FYK GV+ + +C +T +D  H V+AVG
Sbjct: 236 VDIPEGDEDALVHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCSSTELD--HGVLAVG 293

Query: 268 YGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           YG +  G  YW++KNSWG+ WGD GY  M    KN CG+A+ ASYP+V
Sbjct: 294 YGTDHKGGDYWIVKNSWGKTWGDQGYIMMARNKKNNCGVASSASYPLV 341


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 155/265 (58%), Gaps = 15/265 (5%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIR---------STNCKGLSYRLGLNIS 110
           +S+      +G +   V E K     F  + D  R         S   K + +R    ++
Sbjct: 70  VSYKMMMNHFGDLM--VHEFKALMNGFKMSPDTKRNGELYFPSNSNLPKTVDWRQKGAVT 127

Query: 111 PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAF 170
           PVKDQG CGSCW+FS TGSLE       GK +SLSEQ LVDC+ ++ N GC GGL  QAF
Sbjct: 128 PVKDQGQCGSCWSFSATGSLEGQVFLKTGKLVSLSEQNLVDCSTSYGNNGCEGGLMDQAF 187

Query: 171 EYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVS 230
           +Y+  N G+DTE +YPY  ++  C+F    VG      V+I  G E  LQ+A+  V P+S
Sbjct: 188 QYVSDNKGIDTEASYPYEARENTCRFKKNKVGGTDKGHVDIPAGDEKALQNALATVGPIS 247

Query: 231 VAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGD 289
           VA +   G F+FY  GVY+   C  +  D++H V+AVGYG E+G  YWL+KNSWG +WG+
Sbjct: 248 VAIDANHGSFQFYSKGVYNEPNC--SSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGE 305

Query: 290 HGYFKMEMGK-NMCGIATCASYPVV 313
           +GY K+     N CGIA+ ASYP+V
Sbjct: 306 NGYIKIARNHSNHCGIASMASYPLV 330


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 140/216 (64%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQGHCGSCW+FS TG+LE  + +  GK +SLSEQ LVDC+Q + N G
Sbjct: 131 MDWRTKGAVTQVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSQKYGNNG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG+   AF+YIK N G+DTE++YPY   D  C ++ + VG      V+I  G E  L 
Sbjct: 191 CNGGMMDFAFQYIKDNKGIDTEKSYPYEAIDDECHYNPKAVGATDKGFVDIPQGNEKALM 250

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWL 278
            A+  V PVSVA +   + F+FY  GVY   +C +  +D  H V+AVGYG  EDG  YWL
Sbjct: 251 KALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLD--HGVLAVGYGTTEDGEDYWL 308

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WGD GY KM   + N CGIAT ASYP+V
Sbjct: 309 VKNSWGTTWGDQGYVKMARNRDNHCGIATTASYPLV 344


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/215 (49%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW+FSTTGSLE  +    GK +SLSEQQLVDC+  F N+G
Sbjct: 135 VDWRKKGYVTAVKNQGQCGSCWSFSTTGSLEGQHFHKSGKLVSLSEQQLVDCSGKFGNEG 194

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL  QAFEYI  NGG++TEE YPY  +   C F    V       V++  G E +L+
Sbjct: 195 CNGGLMDQAFEYIITNGGIETEEEYPYDARQERCHFKKSEVAATASGCVDVKSGDETDLK 254

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           ++V  V PVS+A +     F+ Y  GVY   KC +T +D  H V+ VGYG +DG  YWL+
Sbjct: 255 NSVAEVGPVSIAIDASHQSFQLYSGGVYDEPKCSSTELD--HGVLVVGYGTDDGQDYWLV 312

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG  WG  GY KM   + N CG+AT ASYP+V
Sbjct: 313 KNSWGTTWGLEGYVKMSRNQDNQCGVATQASYPLV 347


>gi|121543825|gb|ABM55577.1| putative cathepsin L-like protease [Maconellicoccus hirsutus]
          Length = 341

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/215 (49%), Positives = 139/215 (64%), Gaps = 2/215 (0%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW FSTTGSLE  + +   +  SLSEQ L+DC+  + N G
Sbjct: 127 VDWRTEGAVTEVKNQGQCGSCWAFSTTGSLEGQHFRNTKQLTSLSEQNLIDCSGKYGNNG 186

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   AF YIK N G+DTE++YPY G D  C++  +  G      V+I  G E++L+
Sbjct: 187 CSGGLMDNAFAYIKSNKGIDTEQSYPYEGIDDKCRYKPQESGATDKGFVDIPQGDEEKLK 246

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +     F+FYK GVY    CGN   D++H V+AVGYG E+G  YWL+
Sbjct: 247 LAVATVGPISVAIDASHQSFQFYKKGVYYDKGCGNGEEDLDHGVLAVGYGTENGKDYWLV 306

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG+ WG  GY KM   K N CGIAT ASYP+V
Sbjct: 307 KNSWGKRWGLDGYIKMARNKHNHCGIATSASYPLV 341


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/218 (51%), Positives = 141/218 (64%), Gaps = 7/218 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FS TGSLE  + +  GK +SLSEQ LVDC+    N
Sbjct: 120 KTVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSD--KN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL  +AF+YI   GG+DTEE+YPY   DG C F + NVG  V    ++T G+E  
Sbjct: 178 YGCNGGLMDRAFQYIIDAGGIDTEESYPYIAMDGNCHFKTANVGATVTGYTDVTSGSEKA 237

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           LQ AV  + P+SVA +     F+ Y+SGVY+   C +T +D  H V+AVGYG   DG  Y
Sbjct: 238 LQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCSSTLLD--HGVLAVGYGTTIDGTDY 295

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSW E WG +GY  M   K N CGIAT ASYP+V
Sbjct: 296 WIVKNSWAETWGMNGYIWMSRNKDNQCGIATQASYPLV 333


>gi|348531515|ref|XP_003453254.1| PREDICTED: cathepsin L2-like [Oreochromis niloticus]
          Length = 333

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/238 (47%), Positives = 152/238 (63%), Gaps = 9/238 (3%)

Query: 79  MKLRFATFSKNLDLIRSTNC-KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQA 137
           +  R +TF++   L + T   K + +R    ++ VK Q  CGSCW FS TG+LE  + + 
Sbjct: 102 LHRRGSTFNR---LPKGTKLPKTVDWRKQGYVTKVKHQKECGSCWAFSATGALEGQHFRK 158

Query: 138 FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 197
             K +SLSEQQLVDC+++F N GCNGG  + AF+YI+YNGGLDTE++YPY  KDG+C ++
Sbjct: 159 TRKLVSLSEQQLVDCSRSFGNHGCNGGWMNPAFQYIRYNGGLDTEDSYPYKAKDGICHYN 218

Query: 198 SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTP 256
             +VG      V+++   E  L+ AV  + P+S+A +   + F+ Y+SGVY   +C    
Sbjct: 219 PNSVGAICSGHVDVSPD-EAALKQAVATIGPISIAVDASHESFQLYQSGVYDEHRCNKK- 276

Query: 257 MDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             V HA++ VGYG E G  YWLIKNSWG  WGD GY KM   K N CGIAT ASYP+V
Sbjct: 277 -HVTHAMLVVGYGTEGGHDYWLIKNSWGLQWGDKGYIKMTRNKGNQCGIATAASYPLV 333


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 140/208 (67%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQGHCGSCW+FS TGSLE  + +  GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 133 VTEVKDQGHCGSCWSFSATGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDN 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE++YPY  +D  C + ++N G      V+I    ED+L+ AV  V P
Sbjct: 193 AFRYIKDNGGIDTEKSYPYLAEDEKCHYKAQNSGATDKGFVDIEEANEDDLKAAVATVGP 252

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGEN 286
           VS+A +   + F+ Y  GVYS  +C +  +D  H V+ VGYG  +DG  YWL+KNSWG +
Sbjct: 253 VSIAIDASHETFQLYSDGVYSDPECSSQELD--HGVLVVGYGTSDDGQDYWLVKNSWGPS 310

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG +GY KM   + NMCG+A+ ASYP+V
Sbjct: 311 WGLNGYIKMARNQDNMCGVASQASYPLV 338


>gi|3929819|emb|CAA77182.1| cathepsin H [Mus musculus]
          Length = 166

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 122/166 (73%)

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQAFNN GC GGLPSQAFEYI YN 
Sbjct: 1   CGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNK 60

Query: 178 GLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           G+  E++YPY GKD  C+F+ +     V + VNITL  E  +  AV L  PVS AFEV +
Sbjct: 61  GIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTE 120

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSW
Sbjct: 121 DFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSW 166


>gi|383849553|ref|XP_003700409.1| PREDICTED: cathepsin L-like [Megachile rotundata]
          Length = 343

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 143/218 (65%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS TGSLE  + +  G  +SLSEQ L+DC+ ++ N
Sbjct: 124 KMVDWRKCGAVTEVKDQGHCGSCWAFSATGSLEGQHFRRTGVLVSLSEQNLIDCSGSYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL  QAF YIK N GLDTE+ YPY G+D  C++   + G   +  V+I +G E +
Sbjct: 184 NGCNGGLMDQAFSYIKDNKGLDTEKTYPYEGEDDKCRYDKRSSGASDVGFVDIPVGDEQK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ AV  V PVSVA +     F+FY  G+Y   +C +T +D  H V+ VGYG  E+G  Y
Sbjct: 244 LKAAVATVGPVSVAIDASHQSFQFYSDGIYFEPECSSTNLD--HGVLVVGYGTDEEGRDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           W++KNSWGE+WG+ GY KM     N CGIA+ ASYP+V
Sbjct: 302 WIVKNSWGESWGEKGYIKMARNIDNHCGIASSASYPIV 339


>gi|3929735|emb|CAA77179.1| cathepsin H [Homo sapiens]
          Length = 166

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 120/166 (72%)

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN 
Sbjct: 1   CGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNK 60

Query: 178 GLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  PVS AFEV  
Sbjct: 61  GIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQ 120

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
            F  Y++G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSW
Sbjct: 121 DFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSW 166


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 4/209 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQGHCGSCW FS TG+LE  + +     +SLSEQ L+DC+    N GCNGGL  Q
Sbjct: 137 VTPVKDQGHCGSCWAFSATGALEGLHFRKTKVLVSLSEQNLIDCSTEEGNNGCNGGLMDQ 196

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y++ NGG+DTE +YPY G + VC++  EN G       ++ LG ED L+ AV  V P
Sbjct: 197 AFQYVRINGGIDTERSYPYEGNNDVCRYEPENSGAIDTGYTDVPLGDEDALKSAVATVGP 256

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP--YWLIKNSWGE 285
           VSVA +   + F+ Y SGVY    C N P  ++H V+ VGYG ++     YWL+KNSWG+
Sbjct: 257 VSVAIDASQESFQLYSSGVYFEPNCKNEPESLDHGVLVVGYGTDEETQQDYWLVKNSWGD 316

Query: 286 NWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           +WG++GY KM     N CGIAT  S+P V
Sbjct: 317 SWGENGYIKMARNADNQCGIATQPSFPQV 345


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/239 (46%), Positives = 151/239 (63%), Gaps = 9/239 (3%)

Query: 84  ATFSKNLDLIRSTNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 140
           A   K    IRS + K    + +R    ++ VK+QG CGSCW FSTTG++E  +++   +
Sbjct: 132 AIRHKGSTFIRSEHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFSTTGAIEGQHYRKTNR 191

Query: 141 GISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV----CKF 196
            ++LSEQQLVDC++++ N GC+GGL + AFEY++ N G+D+E +YPY   DG     C F
Sbjct: 192 LVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLF 251

Query: 197 SSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNT 255
           ++ N+  QV   VNI  G E  L  AV    PVSVA    +  F  YKSG+YS T C  T
Sbjct: 252 NASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGT 311

Query: 256 PMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
              ++H V+ VGYG E+G  YWLIKNSWGE WG+ GY K+  G  NMCG+A+ ASYP+V
Sbjct: 312 LDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370


>gi|209693435|ref|NP_001129410.1| cathepsin L precursor [Acyrthosiphon pisum]
 gi|251823771|ref|NP_001156569.1| cathepsin L precursor [Acyrthosiphon pisum]
          Length = 341

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 153/238 (64%), Gaps = 8/238 (3%)

Query: 82  RFATFSKNLDLIRSTNC---KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
           R  T  + +  ++S N    K + +R    ++PVK+QG CGSCW+FS TGSLE  + +  
Sbjct: 106 RNFTNDEAVTFLKSENVVIPKSVDWRKKGYVTPVKNQGQCGSCWSFSATGSLEGQHFRKT 165

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           G  +SLSEQ L+DC++ + N GC GGL   AF+YIK N GLDTE++YPY  +D  C+++ 
Sbjct: 166 GVLVSLSEQNLIDCSRKYGNNGCEGGLMDLAFKYIKSNKGLDTEKSYPYEAEDDKCRYNP 225

Query: 199 ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPM 257
           EN G      V+I  G ED L HA+  V PVS+A +   + F+FYK GV+ + +C +T +
Sbjct: 226 ENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCSSTEL 285

Query: 258 DVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           D  H V+AVG+G +  G  YW++KNSWG+ WGD GY  M    KN CG+A+ ASYP+V
Sbjct: 286 D--HGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMARNKKNNCGVASSASYPLV 341


>gi|21425246|emb|CAD33266.1| cathepsin L [Aphis gossypii]
          Length = 341

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 153/238 (64%), Gaps = 8/238 (3%)

Query: 82  RFATFSKNLDLIRSTNC---KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
           R  T  + +  ++S N    K + +R    ++PVK+QG CGSCW+FS TGSLE  + +  
Sbjct: 106 RNFTNDEAVTFLKSENVVIPKSVDWRKKGYVTPVKNQGQCGSCWSFSATGSLEGQHFRKT 165

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           G  +SLSEQ L+DC++ + N GC GGL   AF+YIK N GLDTE++YPY  +D  C+++ 
Sbjct: 166 GVLVSLSEQNLIDCSRKYGNNGCEGGLMDLAFKYIKSNKGLDTEKSYPYEAEDDKCRYNP 225

Query: 199 ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPM 257
           EN G      V+I  G ED L HA+  V PVS+A +   + F+FYK GV+ + +C +T +
Sbjct: 226 ENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCSSTEL 285

Query: 258 DVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           D  H V+AVG+G +  G  YW++KNSWG+ WGD GY  M    KN CG+A+ ASYP+V
Sbjct: 286 D--HGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMARNKKNNCGVASSASYPLV 341


>gi|306992173|gb|ADN19567.1| cathepsin L-like proteinase [Spodoptera frugiperda]
          Length = 344

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/216 (50%), Positives = 144/216 (66%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG+LE  + +  G  +SLSEQ LVDC+ A+ N G
Sbjct: 131 VDWRKKGAVTDVKDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLVDCSAAYGNNG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF+YIK NGG+DTE++YPY   D  C+++ +N G   +  V+I  G E++L 
Sbjct: 191 CNGGLMDNAFKYIKDNGGIDTEKSYPYEAVDDKCRYNPKNSGADDVGFVDIPQGDEEKLM 250

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            AV  V P+SVA +   + F+FY  GVY    C +T  D++H V+ VGYG  E+G  YWL
Sbjct: 251 QAVATVGPISVAIDASQETFQFYSKGVYYDENCSST--DLDHGVMVVGYGTEEEGGDYWL 308

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG +WG+ GY KM   K N CGIA+ ASYP+V
Sbjct: 309 VKNSWGRSWGELGYIKMAHNKNNHCGIASSASYPLV 344


>gi|328776427|ref|XP_625135.3| PREDICTED: cathepsin L-like [Apis mellifera]
          Length = 351

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 143/218 (65%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  G  +SLSEQ L+DC+  + N
Sbjct: 130 KKVDWRKEGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLIDCSGKYGN 189

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL  QAF+YIK N GLDTE +YPY  ++  C+++  N G   +  ++I  G E  
Sbjct: 190 NGCNGGLMDQAFQYIKDNKGLDTEASYPYEAENDKCRYNPANSGAIDVGYIDIPTGDEKL 249

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ AV  + PVSVA +     F+FY  GVY   +C +  +D  H V+ +GYG  E+G  Y
Sbjct: 250 LKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSEELD--HGVLVIGYGTNENGQDY 307

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE WG++GY KM   K N CGIA+ ASYP+V
Sbjct: 308 WLVKNSWGETWGNNGYIKMARNKLNHCGIASSASYPLV 345


>gi|380014284|ref|XP_003691169.1| PREDICTED: cathepsin L-like [Apis florea]
          Length = 345

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 143/218 (65%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW+FS TG+LE  + +  G  +SLSEQ L+DC+  + N
Sbjct: 124 KKVDWRKEGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLIDCSGKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL  QAF+YIK N GLDTE +YPY  ++  C+++  N G   +  ++I  G E  
Sbjct: 184 NGCNGGLMDQAFQYIKDNKGLDTEASYPYEAENDKCRYNPANSGAIDVGYIDIPTGNEKL 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ AV  + PVSVA +     F+FY  GVY   +C +  +D  H V+ +GYG  E+G  Y
Sbjct: 244 LKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSEELD--HGVLVIGYGTNENGEDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE WG++GY KM   K N CGIA+ ASYP+V
Sbjct: 302 WLVKNSWGETWGNNGYIKMARNKLNHCGIASSASYPLV 339


>gi|345493482|ref|XP_001602523.2| PREDICTED: cathepsin L-like [Nasonia vitripennis]
          Length = 514

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/209 (50%), Positives = 140/209 (66%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG+CGSCW FS TGSLE  + +  G  ISLSEQ LVDC+  F N GC+GGL + 
Sbjct: 307 VTPVKNQGNCGSCWAFSATGSLEGQHFRHNGSLISLSEQNLVDCSGRFGNDGCDGGLMNN 366

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF Y+K N GLD+E++YPY  +D  C+++ +N        VNI  G+E +LQ AV  V P
Sbjct: 367 AFTYVKVNRGLDSEKSYPYEAEDDRCRYNPKNSAADDAGYVNIPTGSESKLQAAVATVGP 426

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED--GVPYWLIKNSWGE 285
           +SVA +   D F FY SGVY    C  T  D++H V+A+GYG +   G  +WL+KNSWGE
Sbjct: 427 ISVAIDADSDSFMFYHSGVYYEPDCSRT--DLDHGVLAIGYGTDSKTGKQFWLVKNSWGE 484

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +WG+ GY +M   + N CGIAT ASYP+V
Sbjct: 485 DWGEKGYIRMSRNRHNNCGIATAASYPLV 513



 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 119/181 (65%), Gaps = 4/181 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++P+KDQGHCGSCW+FS TG+LE  + +  GK +SLSEQ L+DC+  + N
Sbjct: 124 KSVDWRQEGAVTPIKDQGHCGSCWSFSATGALEGQHFRQTGKLVSLSEQNLIDCSGKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+YI+ N GLDTE  YPY  +D  C++++ N G + +  V+I  G E++
Sbjct: 184 NGCNGGLMDNAFKYIRDNKGLDTESTYPYEAEDDECRYNARNSGAEDVGFVDIPEGDEEK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L+ A+  + PVSVA +     F+FY +GVY   +C +T +D  H V+ VGYG  EDG  Y
Sbjct: 244 LKAAIATIGPVSVAIDASHQTFQFYSTGVYYEPECSSTELD--HGVLVVGYGTSEDGQDY 301

Query: 277 W 277
           W
Sbjct: 302 W 302


>gi|50539796|ref|NP_001002368.1| cathepsin L.1 precursor [Danio rerio]
 gi|49900360|gb|AAH75887.1| Cathepsin L.1 [Danio rerio]
          Length = 334

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 136/207 (65%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ +KDQ  CGSCW FS TGSLE    +  GK +SLSEQQLVDC+ ++ N GC+GGL  Q
Sbjct: 130 VTDIKDQKQCGSCWAFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGSYGNYGCDGGLMDQ 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI+ N GLDTE++YPY  +DG C+F+   VG      V+I  G E  LQ AV  + P
Sbjct: 190 AFQYIEANKGLDTEDSYPYEAQDGECRFNPSTVGASCTGYVDIASGDESALQEAVATIGP 249

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y SGVY+   C ++ +D  H V+AVGYG  +G  YW++KNSWG +W
Sbjct: 250 ISVAIDAGHSSFQLYSSGVYNEPDCSSSELD--HGVLAVGYGSSNGDDYWIVKNSWGLDW 307

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIAT ASYP+V
Sbjct: 308 GVQGYILMSRNKSNQCGIATAASYPLV 334


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 105/208 (50%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQGHCGSCW FS+TG+LE  + +  G  ISLSEQ LVDC+  + N GCNGGL   
Sbjct: 135 VTGVKDQGHCGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTKYGNNGCNGGLMDN 194

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE++YPY G D  C F+   +G       +I  G E +L  AV  + P
Sbjct: 195 AFRYIKDNGGIDTEKSYPYEGIDDSCHFNKGTIGATDRGFTDIPQGDEKKLAQAVATIGP 254

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGEN 286
           VSVA +   + F+FY +GVY   +C   P +++H V+ VGYG  E+G  YWL+KNSWG  
Sbjct: 255 VSVAIDASHESFQFYSTGVYDEPQC--DPQNLDHGVLVVGYGTDENGKDYWLVKNSWGTT 312

Query: 287 WGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WGD G+ KM     N CGIAT +SYP+V
Sbjct: 313 WGDKGFIKMARNDDNQCGIATASSYPLV 340


>gi|82796372|gb|ABB91778.1| cathepsin L [Hymeniacidon perlevis]
          Length = 323

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 109/215 (50%), Positives = 136/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW FSTTGSLE  +    GK +SLSEQ LVDC+    N+G
Sbjct: 111 VDWRTKGAVTGVKNQGQCGSCWAFSTTGSLEGQHFLKTGKLVSLSEQNLVDCSGKEGNEG 170

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL  QAFEYIK NGG+DTE +YPY   D  C+F + +VG      V+I    E+ L 
Sbjct: 171 CNGGLMDQAFEYIKKNGGIDTEASYPYQAHDERCRFKASDVGATCTGYVDIKREDENALM 230

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  + PVSVA +     F+ Y+SGVY   +C  T +D  H V+A+GYG E G  YWL+
Sbjct: 231 QAVEKIGPVSVAIDASHSSFQLYRSGVYYERECSQTALD--HGVLAIGYGTEGGSDYWLV 288

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG +WG  GY  M   + N CGIAT ASYP V
Sbjct: 289 KNSWGTDWGMEGYIMMSRNRNNNCGIATEASYPTV 323


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 107/207 (51%), Positives = 136/207 (65%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW+FS TGS+E  +  A G  +SLSEQ LVDC+ A  N GCNGGL   
Sbjct: 120 VTPVKNQGQCGSCWSFSATGSMEGQHFNATGTLMSLSEQNLVDCSAAEGNHGCNGGLMDD 179

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEY+  N G+DTE +YPY   D  CKF++ +VG  +   V++T  +E +LQ AV  + P
Sbjct: 180 AFEYVIKNNGIDTEASYPYRAVDSTCKFNTADVGATISGYVDVTKDSESDLQVAVATIGP 239

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA +     F+FY SGVY    C +T +D  H V+AVGYG +    YWL+KNSWG +W
Sbjct: 240 VSVAIDASHISFQFYSSGVYDPLICSSTNLD--HGVLAVGYGTDGSKDYWLVKNSWGASW 297

Query: 288 GDHGYFKM-EMGKNMCGIATCASYPVV 313
           G  GY +M     N CGIAT ASYPVV
Sbjct: 298 GMSGYIEMVRNHNNKCGIATSASYPVV 324


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/207 (51%), Positives = 135/207 (65%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTGSLE  + +A  + +SLSE  LVDC++ + NQGCNGGL   
Sbjct: 120 VTEVKDQGQCGSCWAFSTTGSLEGQHFKATKQLVSLSESNLVDCSKKWGNQGCNGGLMDN 179

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YI  N G+DTE++YPY  +D  C F   NVG       +IT G+ED LQ AV  + P
Sbjct: 180 AFKYIADNKGIDTEKSYPYKPEDRKCNFKKANVGATDKLYKDITSGSEDALQEAVATIGP 239

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +   D F+ Y  GVY+   C    +D  H V+AVGY  ++G  YW++KNSWG++W
Sbjct: 240 ISVAIDASHDSFQLYSGGVYNEKACSTKTLD--HGVLAVGYDSKNGDDYWIVKNSWGKSW 297

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  GY  M    KN CGIAT ASYPVV
Sbjct: 298 GIDGYIWMSRNKKNQCGIATMASYPVV 324


>gi|110349475|gb|ABG73218.1| cathepsin L 2 precursor [Diaprepes abbreviatus]
          Length = 348

 Score =  213 bits (542), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 110/232 (47%), Positives = 146/232 (62%), Gaps = 5/232 (2%)

Query: 83  FATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
           F T++   +L        + +R    ++PVK+Q +CGSCW+FS TG+LEA + +   K I
Sbjct: 121 FVTYALPTNLDEVDLPTDIDWRQKGAVTPVKNQRNCGSCWSFSATGALEAQWFKKTNKLI 180

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQQLVDC+  + N GC+GG    AF YIK NGG+DTE++YPYT KDG C +   N  
Sbjct: 181 SLSEQQLVDCSGRYGNHGCHGGWMHWAFGYIKENGGIDTEQSYPYTAKDGRCAYKPGNKA 240

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
             V   + +  G E++L   V  V P+S+A EV   F+FY SGVY   +CG++   +NHA
Sbjct: 241 ATVSQVIMVPRG-ENQLAAKVSSVGPISIAAEVSHKFQFYHSGVYDEPQCGHS---LNHA 296

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           ++AVGYG   G  +WL+KNSWG  WGD GY +M   K N CGIA  ASYP V
Sbjct: 297 MLAVGYGSMGGKNFWLVKNSWGTGWGDQGYIRMAKDKNNQCGIALMASYPGV 348


>gi|340505335|gb|EGR31675.1| papain family cysteine protease, putative [Ichthyophthirius
           multifiliis]
          Length = 229

 Score =  213 bits (542), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 114/217 (52%), Positives = 146/217 (67%), Gaps = 6/217 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS---LSEQQLVDCAQAFN 157
           L +R    ++ VK+Q  CGSCW+FSTTG++E+  H A   G     LSEQQL+DCAQ FN
Sbjct: 8   LDWRQYGIVTSVKNQRSCGSCWSFSTTGAVES--HWALKNGNPPPILSEQQLIDCAQDFN 65

Query: 158 NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAED 217
           N GC GGLPSQAFEYI YNGGL++E+ YPY      C F +  V  ++    NIT   E+
Sbjct: 66  NFGCKGGLPSQAFEYIFYNGGLESEKDYPYMAATRNCTFDASKVSAKLEGQYNITFQDEN 125

Query: 218 ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           EL + +    P+S+A++V + F  Y+SGVYSS  C   P DVNHAV+AVGYGV   G  Y
Sbjct: 126 ELLYKLANEGPISIAYQVNNDFFQYRSGVYSSPSCSQQPSDVNHAVLAVGYGVSISGQLY 185

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           +++KNSWG  WG +GYF +E G NMCG+A CASYP+V
Sbjct: 186 YIVKNSWGPEWGINGYFLIERGTNMCGLADCASYPIV 222


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 185/344 (53%), Gaps = 47/344 (13%)

Query: 12  ILLLCCAAAASASASSF-----DDSNPIRLVSSDGLRDFETS---VLQVIGQARHALSFA 63
           ILL+ CA  A+ +A SF     ++ N  +L       D ET     +++  + +H +  A
Sbjct: 3   ILLVLCAVVAAGTAVSFFDLVREEWNTFKLEHKKQY-DSETEEKFRMKIYAENKHKV--A 59

Query: 64  RFARRYGK----------------IYESVEEMKLRFATFSKNLDLI-RSTNCKG------ 100
           +  +RY K                 +E V  M     T   N  L  +  + +G      
Sbjct: 60  KHNQRYQKGLVSYRLKTNKYSDMLHHEFVNTMNGFNKTVKHNKGLYAKGNDIRGATFVSP 119

Query: 101 --------LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 152
                   + +R    ++PVKDQG CGSCW+FSTTG+LE  + +  G  +SLSEQ L+DC
Sbjct: 120 ANVAAPPTVDWRQHGAVTPVKDQGKCGSCWSFSTTGALEGQHFRKSGFLVSLSEQNLIDC 179

Query: 153 AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT 212
           + A+ N GCNGGL   AF+YIK N G+DTE+ YPY   D  C+++ +N G + +  V+I 
Sbjct: 180 SSAYGNNGCNGGLMDNAFKYIKDNDGIDTEKTYPYEAVDDKCRYNPKNSGAEDVGFVDIP 239

Query: 213 LGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV- 270
            G E +L  A+  V PVSVA +   + F+ Y  GVY    C +  +D  H V+ VGYG  
Sbjct: 240 AGDEHKLMLALATVGPVSVAIDASQESFQLYSDGVYYDENCSSENLD--HGVLVVGYGTD 297

Query: 271 EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           EDG  YWL+KNSWG +WGD GY KM   + N CGIA+ ASYP+V
Sbjct: 298 EDGGDYWLVKNSWGPSWGDEGYIKMARNRDNHCGIASSASYPLV 341


>gi|37994576|gb|AAH60335.1| Unknown (protein for MGC:68554) [Xenopus laevis]
          Length = 335

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 145/222 (65%), Gaps = 9/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTG+LE  +++   K ISLSEQ LVDC++A  N
Sbjct: 116 KSVDWRKKGYVTPVKDQGQCGSCWAFSTTGALEGQHYRKTSKLISLSEQNLVDCSRAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K NGG+D+E++YPYT KD   C +   N        V++  G E 
Sbjct: 176 EGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNNNSANDTGFVDVQSGCEK 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
           +L  AV  V PVSVA +     F+FY+SG+Y   +C  +  D++H V+ VGYG E    D
Sbjct: 236 DLMKAVASVGPVSVAIDAGHQSFQFYQSGIYYEPEC--SSEDLDHGVLVVGYGFESEDVD 293

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  YW++KNSW E WGD+GY  +   + N CGIAT ASYP+V
Sbjct: 294 GKKYWIVKNSWSEKWGDNGYINIAKDRHNHCGIATAASYPLV 335


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/196 (50%), Positives = 130/196 (66%), Gaps = 3/196 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+K+QG CGSCW FSTTGSLE  +    GK +SLSEQ+LVDC+ A  N G
Sbjct: 117 VDWRTKGAVTPIKNQGQCGSCWAFSTTGSLEGQHALKKGKLVSLSEQELVDCSAAEGNDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   AF YIK N G+DTE++YPYTG+DG C F   +V   V   V++T G+E  LQ
Sbjct: 177 CDGGLMDDAFTYIKKNNGIDTEQSYPYTGEDGTCSFKKSDVAATVTGFVDVTSGSESGLQ 236

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            A   + P+SVA +     F+ Y+SGVY  + C  T +D  H V+ VGYG +DG  YWL+
Sbjct: 237 DASATIGPISVAIDASSWDFQLYESGVYDVSDCSTTELD--HGVLVVGYGTDDGTAYWLV 294

Query: 280 KNSWGENWGDHGYFKM 295
           KNSWG +WG HGY +M
Sbjct: 295 KNSWGTDWGHHGYIQM 310


>gi|148224022|ref|NP_001087489.1| cathepsin L2 precursor [Xenopus laevis]
 gi|51258284|gb|AAH80004.1| MGC81823 protein [Xenopus laevis]
          Length = 335

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/222 (49%), Positives = 147/222 (66%), Gaps = 9/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTG+LE  +++  GK ISLSEQ LVDC++A  N
Sbjct: 116 KTVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHYRKAGKLISLSEQNLVDCSRAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGCNGGL  QAF+Y+K NGG+D+E++YPYT KD   C +            V++  G+E 
Sbjct: 176 QGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNYNSANDTGFVDVPSGSEK 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
           +L  AV  V PVSVA +     F+FY+SG+Y   +C  +  D++H V+ VGYG E    D
Sbjct: 236 DLMKAVASVGPVSVAVDAGHKSFQFYQSGIYYDPEC--SSEDLDHGVLVVGYGFEGEDVD 293

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  YW++KNSW E WG++GY K+   + N CGIAT ASYP+V
Sbjct: 294 GKRYWIVKNSWSEKWGNNGYIKIAKDRHNHCGIATAASYPLV 335


>gi|225706370|gb|ACO09031.1| Cathepsin L precursor [Osmerus mordax]
          Length = 337

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 181/335 (54%), Gaps = 35/335 (10%)

Query: 11  VILLLCCAAAASASA--SSFDDSNPI------------------RLVSSDGLRDFETSVL 50
           V+L+LC  AA +A    + FD+   +                  R+V    L+  E   L
Sbjct: 6   VVLVLCTGAALAAPRFDAQFDEHWDLWKSWHSKNYQHEKEEGWRRMVWEKNLKKIEMHNL 65

Query: 51  Q-VIGQARHALSFARFARRYGKIYESVEE-MKLRFATFSKNLDLIRSTNC---KGLSYRL 105
           +  +G+  ++L    F     + +  V    KL+   F  +L  +   N    K + +R 
Sbjct: 66  EHSLGKHSYSLGMNHFGDMTNEEFRQVMNGYKLQQRKFKGSL-FLEPNNMEAPKQVDWRE 124

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVKDQG CGSCW FSTTG++E    +   K +SLSEQ LVDC++   N+GCNGGL
Sbjct: 125 EGYVTPVKDQGQCGSCWAFSTTGAMEGQMFRKTQKLVSLSEQNLVDCSRPEGNEGCNGGL 184

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVG 224
             QAF+YI+ N GLD+EEAYPY G D   C + +E         ++I  G E  L  A+ 
Sbjct: 185 MDQAFQYIQDNSGLDSEEAYPYLGTDDQPCNYKAEFSAANDTGFMDIPSGKEHALMKAIA 244

Query: 225 LVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLI 279
            V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+AVGYG E    DG  YW++
Sbjct: 245 SVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVLAVGYGFEGEDVDGKKYWIV 302

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 303 KNSWSEKWGDKGYILMAKDRKNHCGIATAASYPLV 337


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 140/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 124 KSVDWREKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKTGTLVSLSEQNLVDCSAKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY G D  C F+ ++VG       +I  G E +
Sbjct: 184 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKDSVGATDRGFADIPQGNEKK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  + PVSVA +   + F+FY  G+Y+  +C +  +D  H V+ VGYG  E G  Y
Sbjct: 244 MAEAVATIGPVSVAIDASHESFQFYSEGIYNEPECNSQNLD--HGVLVVGYGTDESGKDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   + N CGIA+ +SYP+V
Sbjct: 302 WLVKNSWGTTWGDKGFIKMARNEDNQCGIASASSYPLV 339


>gi|225719768|gb|ACO15730.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 338

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 164/294 (55%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G+  H L    F        R+    Y+   E K + + F
Sbjct: 50  RMVWEKNLKKIEIHNLEHTMGKHSHRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSLF 109

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +   L      K + +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 110 MEPNYLQAP---KAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQPFRKTGKLVSLSE 166

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YI+ N GLDTEE+YPY G D   C +  E      
Sbjct: 167 QNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSAANE 226

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  +  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+
Sbjct: 227 TGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECSSEELD--HGVL 284

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT +SYP+V
Sbjct: 285 VVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|226443040|ref|NP_001140018.1| Cathepsin L1 precursor [Salmo salar]
 gi|221221188|gb|ACM09255.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 165/294 (56%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G+  + L    F        R+    Y+   E K + + F
Sbjct: 50  RMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSLF 109

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +   L      K + +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 110 MEPNYLQAP---KAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQQFRKTGKLVSLSE 166

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YI+ N GLDTEE+YPY G D   C +  E  G   
Sbjct: 167 QNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSGANE 226

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  +  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+
Sbjct: 227 TGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECSSEELD--HGVL 284

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT +SYP+V
Sbjct: 285 VVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/217 (47%), Positives = 135/217 (62%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TGSLE  + +  G  +SLSEQ LV C+  F N
Sbjct: 121 KTVDWRTKGAVTPVKNQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGCSTDFGN 180

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YI+ N G+DTE++YPY G DG C F    VG      V+I  G+E +
Sbjct: 181 NGCEGGLMDDAFKYIRANKGIDTEKSYPYNGTDGTCHFKKSTVGATDSGFVDIKEGSETQ 240

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V P+SVA +   + F+FY  GVY   +C +  +D  H V+ VGYG  +G  YW
Sbjct: 241 LKKAVATVGPISVAIDASHESFQFYSDGVYDEPECDSESLD--HGVLVVGYGTLNGTDYW 298

Query: 278 LIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            +KNSWG  WGD GY +M    KN CGIA+ AS P+V
Sbjct: 299 FVKNSWGTTWGDEGYIRMSRNKKNQCGIASSASIPLV 335


>gi|195995651|ref|XP_002107694.1| hypothetical protein TRIADDRAFT_36902 [Trichoplax adhaerens]
 gi|190588470|gb|EDV28492.1| hypothetical protein TRIADDRAFT_36902 [Trichoplax adhaerens]
          Length = 544

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/301 (37%), Positives = 161/301 (53%), Gaps = 52/301 (17%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  FA ++ K Y+   E + R  TF +NL  I STN + L + + +N             
Sbjct: 240 FHHFASKHQKNYKDERERRFRENTFRQNLRFIHSTNRQRLGFTVKVNHLADLTDNEIKVM 299

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVKDQG CGSCW+F TTG++E
Sbjct: 300 NGRKTSLKKSKTYQMPFNLTGLERYVAPTIDWRKLGAVTPVKDQGVCGSCWSFGTTGTIE 359

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGK 190
            + +   GK +SLS+Q ++DC   F N GC+GG   +AFE+I  +GG+ TE++Y  Y  +
Sbjct: 360 GSLYLKSGKLVSLSQQNMIDCTWGFGNNGCDGGEEFRAFEWIAKHGGIATEKSYGQYLAQ 419

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSS 249
           DG CK +   +G ++   V +  G +  L+ AV  V PV+V  +  +  F FY SG+Y  
Sbjct: 420 DGKCKLNKTKIGAKIRGWVQVPHGNQSALKLAVSAVGPVAVGMDAALKSFSFYSSGIYYD 479

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 309
            +CGN   D++HAV+AVGYG E+G  YW+IKNSW  +WGD GY K+ M  N CGIAT AS
Sbjct: 480 KQCGNKEQDLDHAVLAVGYGNENGQDYWIIKNSWSTHWGDDGYVKLSMKNNNCGIATDAS 539

Query: 310 Y 310
           +
Sbjct: 540 F 540


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 138/218 (63%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW+FS+TGSLE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 123 KAVDWRQHGAVTSVKDQGHCGSCWSFSSTGSLEGQHFRKAGVLVSLSEQNLVDCSTKYGN 182

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY G D  C F+   VG      V+I  G E+ 
Sbjct: 183 NGCNGGLMDNAFRYIKDNGGVDTEKSYPYEGIDDSCHFNKATVGATDTGFVDIPQGDEEA 242

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           +  AV  + PV+VA +   + F+ Y  GVY+   C +  +D  H V+ VGYG + DG  Y
Sbjct: 243 MMKAVATMGPVAVAIDASNESFQLYSEGVYNDPNCSSDNLD--HGVLVVGYGTDKDGQDY 300

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD GY KM   + N CGIAT +S+P V
Sbjct: 301 WLVKNSWGTTWGDQGYIKMARNQDNQCGIATASSFPTV 338


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 150/250 (60%), Gaps = 21/250 (8%)

Query: 66  ARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFS 125
            +R GKIY            F  N  L +S +     +R    ++PVKDQG CGSCW+FS
Sbjct: 100 TKREGKIY------------FPSNDKLPKSVD-----WRQKGAVTPVKDQGQCGSCWSFS 142

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
            TGSLE       GK +SLSEQ L+DC++ + N GC GGL  +AF+Y+  N G+DTE +Y
Sbjct: 143 ATGSLEGQIFLKKGKLVSLSEQNLMDCSKEYGNNGCEGGLMDKAFQYVSDNKGIDTESSY 202

Query: 186 PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKS 244
           PY  +D  C+F  + VG      V+I  G E  LQ+A+  V P+SVA +   + F FY  
Sbjct: 203 PYEARDYACRFKKDKVGGTDKGYVDIPEGDEKALQNALATVGPISVAIDASHESFHFYSE 262

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCG 303
           GVY+   C  +  D++H V+AVGYG E+G  YWL+KNSWG +WG+ GY K+     N CG
Sbjct: 263 GVYNEPYC--SSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHSNHCG 320

Query: 304 IATCASYPVV 313
           IA+ ASYP+V
Sbjct: 321 IASMASYPIV 330


>gi|254746340|emb|CAX16635.1| putative C1A cysteine protease precursor [Manduca sexta]
          Length = 342

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 141/208 (67%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTG+LE  + +  G  +SLSEQ L+DC+  + N GCNGGL   
Sbjct: 137 VTEVKDQGKCGSCWAFSTTGALEGQHFRKSGYLVSLSEQNLIDCSSTYGNNGCNGGLMDN 196

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK NGG+DTE+ YPY G D  C+++ +N G + +  V+I  G E++L  AV  V P
Sbjct: 197 AFKYIKDNGGIDTEKTYPYEGVDDKCRYNPKNSGAEDVGFVDIPSGDEEKLMQAVATVGP 256

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGEN 286
           VSVA +   + F+FY  GVY  T+C +T  D++H V+ VGYG ++ G  YWL+KNSW   
Sbjct: 257 VSVAIDASQNSFQFYSGGVYYDTECSST--DLDHGVLVVGYGTDEAGGDYWLVKNSWSRT 314

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY KM   + N CGIAT ASYP+V
Sbjct: 315 WGELGYIKMARNRDNHCGIATDASYPLV 342


>gi|225718114|gb|ACO14903.1| Cathepsin L precursor [Caligus clemensi]
          Length = 336

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/209 (51%), Positives = 138/209 (66%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW+FS TG+LE    +  GK ISLSEQ LVDC++ F N GC GGL   
Sbjct: 130 VTPVKNQGQCGSCWSFSATGALEGQDFRKTGKLISLSEQNLVDCSRKFGNNGCEGGLMDF 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YI+ N G+DTE +YPY G DG C ++ +N G   +  V+I  G+E +L+ AV  V P
Sbjct: 190 AFTYIRDNKGIDTEASYPYEGIDGHCHYNPKNKGGSDIGFVDIKKGSEKDLKKAVAGVGP 249

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGE 285
           +SVA +     F+FY  GVY  +KC +  +D  H V+ VG+G +   G  YWL+KNSW E
Sbjct: 250 ISVAIDASHMSFQFYSHGVYVESKCSSEELD--HGVLVVGFGTDSVSGEDYWLVKNSWSE 307

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WGD GY KM   K NMCGIA+ ASYPVV
Sbjct: 308 KWGDQGYIKMARNKENMCGIASSASYPVV 336


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 161/308 (52%), Gaps = 57/308 (18%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN----CKGLSYRLGLN-------- 108
           ++  F   + K Y+++EE   RF  F +N+  I   N        SY LG+N        
Sbjct: 55  AWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKHE 114

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++ VK+QG CGSCW+FSTTG
Sbjct: 115 EFVKYNGLKKTSLKDGGCSSYLAANNLVEPDSVDWRKKGYVTDVKNQGQCGSCWSFSTTG 174

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           SLE  + +  GK +SLSE QLVDC+Q+F N+GCNGGL   AF+YIK  GGL++EE YPY 
Sbjct: 175 SLEGQHFRKSGKLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVGGLESEEDYPYK 234

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVY 247
            K G CKF    V       V++  G+E  L+ AV  V PVSVA +     F+ Y  GVY
Sbjct: 235 PKQGTCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDASHSSFQSYAGGVY 294

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIA 305
              +C +  +D  H V+ VGYG +D G  YW++KNSWG  WG+ GY KM    KN CGIA
Sbjct: 295 DEPECSSEQLD--HGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVKMSRNKKNQCGIA 352

Query: 306 TCASYPVV 313
           T ASYP+V
Sbjct: 353 TQASYPLV 360


>gi|47086859|ref|NP_997749.1| cathepsin L, 1 a precursor [Danio rerio]
 gi|42542930|gb|AAH66490.1| Cathepsin L1, a [Danio rerio]
          Length = 337

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/220 (50%), Positives = 140/220 (63%), Gaps = 9/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++PVKDQG CGSCW FSTTG+LE    +  GK +SLSEQ LVDC++   N+G
Sbjct: 120 LDWREKGYVTPVKDQGECGSCWAFSTTGALEGQMFRKTGKLVSLSEQNLVDCSRPEGNEG 179

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL  QAF+Y+K   GLD+EE+YPY G D   C F  +N        V+I  G E  L
Sbjct: 180 CNGGLMDQAFQYVKDQNGLDSEESYPYLGTDDQPCHFDPKNSAANDTGFVDIPSGKERAL 239

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGV 274
             A+  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+AVGYG E    DG 
Sbjct: 240 MKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVLAVGYGFEGEDVDGK 297

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YW++KNSW ENWGD GY  M   + N CGIAT ASYP+V
Sbjct: 298 KYWIVKNSWSENWGDKGYIYMAKDRHNHCGIATAASYPLV 337


>gi|395514298|ref|XP_003761356.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 365

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 139/218 (63%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TGSLE  + +  GK +SLSEQ LVDC+ A  N
Sbjct: 150 KSVDWRDKGYVTPVKNQGQCGSCWAFSATGSLEGQWFRKTGKLVSLSEQNLVDCSTAQGN 209

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AFEY+K NGG+DTEE+YPY   D  C++  +  G  +   V+I    E  
Sbjct: 210 SGCQGGLMDNAFEYVKENGGIDTEESYPYIAADDTCQYKPQYSGANITGYVDIPSRMEKA 269

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L+ AV  V P+SVA +     F+FY+SGVY   +C +   D++H V+AVGYGV+     Y
Sbjct: 270 LEKAVATVGPISVAIDAGHSSFQFYRSGVYYEPECSSE--DLDHGVLAVGYGVQGKNGKY 327

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSWGE WGD GY  M   + N CGIAT ASYP V
Sbjct: 328 WIVKNSWGEEWGDSGYILMARDRNNHCGIATAASYPEV 365


>gi|307175095|gb|EFN65237.1| Cathepsin L [Camponotus floridanus]
          Length = 372

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 157/245 (64%), Gaps = 13/245 (5%)

Query: 75  SVEEMKLRFATFSK--NLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEA 132
           +V E +L  ATF +  N++L +S +     +R    ++ +KDQG CGSCW FS+TG+LE 
Sbjct: 135 TVSEEQLIGATFIEPANVELPKSVD-----WRKKGAVTAIKDQGQCGSCWAFSSTGALEG 189

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            + +  G  +SLSEQ L+DC+  + N GCNGGL   AF YIK N GLDTE++YPY  ++ 
Sbjct: 190 QHFRQSGVLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFRYIKENKGLDTEKSYPYEAEND 249

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTK 251
            C+++ +N G   +  V+I  G ED+L+ AV  + P+SVA +   + F FY  GVY   +
Sbjct: 250 QCRYNPKNSGASDVGFVDIPEGDEDKLKAAVATIGPISVAIDASHESFHFYSEGVYYEPE 309

Query: 252 CGNTPMDVNHAVVAVGYGVEDGV--PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
           C  +P +++H V+ VGYG + G    YWL+KNSWGE WG+ GY KM   K N CGIA+ A
Sbjct: 310 C--SPANLDHGVLIVGYGTDSGTGEDYWLVKNSWGETWGEKGYIKMARNKENHCGIASSA 367

Query: 309 SYPVV 313
           SYP+V
Sbjct: 368 SYPLV 372


>gi|225709022|gb|ACO10357.1| Cathepsin L precursor [Caligus rogercresseyi]
          Length = 332

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/229 (49%), Positives = 144/229 (62%), Gaps = 9/229 (3%)

Query: 92  LIRSTNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
            I S N K    + +R    ++PVK+QG CGSCW FS+TGSLE    +  GK I LSEQ 
Sbjct: 106 FIPSKNVKLPTHVDWREDGAVTPVKNQGQCGSCWAFSSTGSLEGQTFRKTGKLIPLSEQN 165

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           LVDC++ + N GC GGL   AF YI+ N G+DTE +YPY G  G C +     G   +  
Sbjct: 166 LVDCSRKYGNNGCEGGLMDFAFTYIRDNKGIDTEGSYPYEGVGGRCHYDPSKKGSSDIGF 225

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           V++  G+E+EL  AV  V PVSVA +     F+FY  GVY  +KC  +P +++H V+ VG
Sbjct: 226 VDVKKGSEEELLKAVASVGPVSVAIDASHMSFQFYSHGVYFESKC--SPENLDHGVLVVG 283

Query: 268 YGVED--GVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           YG ++  G  YWL+KNSW ENWGD GY KM    KNMCGIA+ ASYPVV
Sbjct: 284 YGTDENSGEDYWLVKNSWSENWGDQGYIKMARNKKNMCGIASSASYPVV 332


>gi|23452059|gb|AAN32912.1| cathepsin [Danio rerio]
          Length = 310

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/220 (50%), Positives = 140/220 (63%), Gaps = 9/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++PVKDQG CGSCW FSTTG+LE    +  GK +SLSEQ LVDC++   N+G
Sbjct: 93  LDWREKGYVTPVKDQGECGSCWAFSTTGALEGQMFRKTGKLVSLSEQNLVDCSRPEGNEG 152

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL  QAF+Y+K   GLD+EE+YPY G D   C F  +N        V+I  G E  L
Sbjct: 153 CNGGLMDQAFQYVKDQNGLDSEESYPYLGTDDQPCHFDPKNSAANDTGFVDIPSGKERAL 212

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGV 274
             A+  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+AVGYG E    DG 
Sbjct: 213 MKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVLAVGYGFEGEDVDGK 270

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YW++KNSW ENWGD GY  M   + N CGIAT ASYP+V
Sbjct: 271 KYWIVKNSWSENWGDKGYIYMAKDRHNHCGIATAASYPLV 310


>gi|41688064|dbj|BAD08618.1| cathepsin L preproprotein [Cyprinus carpio]
          Length = 337

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 167/294 (56%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G   + L   RF        R+    Y+  +E + R + F
Sbjct: 49  RMVWEKNLQKIELHNLEHSMGTHTYRLGMNRFGDMTHEEFRQVMNGYKHKKERRFRGSLF 108

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +  + +   N   L +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 109 MEP-NFLEVPNS--LDWREKGYVTPVKDQGECGSCWAFSTTGAMEGQMFRKTGKLVSLSE 165

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YIK   GLD+EE+YPY G D   C +  +      
Sbjct: 166 QNLVDCSRPEGNEGCNGGLMDQAFQYIKDQNGLDSEESYPYVGTDDQPCHYDPKYSAAND 225

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  L  A+  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+
Sbjct: 226 TGFVDIPSGKEHALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVL 283

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           AVGYG E    DG  YW++KNSW ENWGD GY  M   + N CGIAT ASYP+V
Sbjct: 284 AVGYGFEGEDVDGKKYWIVKNSWSENWGDKGYVYMAKDRHNHCGIATAASYPLV 337


>gi|288548564|gb|ADC52430.1| cathepsin L1 cysteine protease [Pinctada fucata]
          Length = 331

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 105/208 (50%), Positives = 138/208 (66%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QGHCGSCW+FS TGSLE  + ++ GK +SLSEQ L+DC++   N GC GGL   
Sbjct: 126 VTPVKNQGHCGSCWSFSATGSLEGQHFKSTGKLVSLSEQNLIDCSKKEGNHGCKGGLMDF 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AFEYI+ N G+DTE++YPYT KDG+ C+F   +VG      V++   +E  LQ AV  V 
Sbjct: 186 AFEYIQKNDGIDTEQSYPYTAKDGIECRFKKADVGATDKGKVDLPRQSEKALQEAVATVG 245

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           P+SVA +     F+ YK G+Y+   C +T +D  H V+AVGYG E    YWL+KNSWG  
Sbjct: 246 PISVAMDAGHRSFQLYKRGIYTEPMCSSTKLD--HGVLAVGYGSEGEGDYWLVKNSWGAT 303

Query: 287 WGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WG  G+F +    +N CGIAT ASYP V
Sbjct: 304 WGMEGFFMLARNHRNECGIATQASYPKV 331


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 139/218 (63%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 124 KSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY G D  C F+   +G      V+I  G E++
Sbjct: 184 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           ++ AV  + PVSVA +   + F+ Y  GVY+  +C    +D  H V+ VGYG  E G+ Y
Sbjct: 244 MKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLD--HGVLVVGYGTDESGMDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WG+ GY KM   + N CGIAT +SYP V
Sbjct: 302 WLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339


>gi|348531519|ref|XP_003453256.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 102/207 (49%), Positives = 134/207 (64%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FSTTG LE  + +  GK +SLSEQQL+DC+ +F N GCNGG   +
Sbjct: 130 VTEVKDQKQCGSCWAFSTTGVLEGQHFRKTGKLVSLSEQQLMDCSHSFGNNGCNGGSVKR 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A +YI+ NGG+DTE +YPY  K   C++  + +G +    V++    E+ L+ AV  + P
Sbjct: 190 ALQYIQANGGIDTETSYPYKAKGQRCRYKPDGIGAKCTGYVHVKPSNEETLKKAVATLGP 249

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +     F+FY+SGVY    C  T +D  H  +AVGYG E+G  YWLIKNSWG  W
Sbjct: 250 ISVGIDASRHSFQFYQSGVYDDPDCSKTVLD--HGALAVGYGTENGHDYWLIKNSWGLRW 307

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   K N CGIA+ ASYP+V
Sbjct: 308 GDKGYIKMSRNKSNQCGIASEASYPLV 334


>gi|23306947|dbj|BAC16538.1| cathepsin L [Engraulis japonicus]
          Length = 336

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 166/294 (56%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    LR  E   L+  +G   + L    F        R+    Y+   E +++ + F
Sbjct: 48  RVVWEKNLRKIEMHNLEHSMGAHSYRLGMNHFGDMTHEEFRQVMNGYKHKAERRVKGSLF 107

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +  + I +   K + YR     +PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 108 MEP-NFIEAP--KKIDYRDLGYATPVKDQGQCGSCWAFSTTGAMEGQLFREGGKLVSLSE 164

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YIK NGGLDTE+AYPY G D   C +  +      
Sbjct: 165 QNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDTEDAYPYLGTDDQDCHYDPKYSAAND 224

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  L  AV  V PVSVA +   + F+FY SG+Y   +C +T +D  H V+
Sbjct: 225 TGFVDIPEGKERALMKAVAAVGPVSVAIDAGHESFQFYHSGIYFEKECSSTELD--HGVL 282

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT ASYP++
Sbjct: 283 VVGYGFEGEDVDGKKYWIVKNSWSEKWGDEGYIYMAKDRKNHCGIATAASYPLM 336


>gi|185135439|ref|NP_001117777.1| procathepsin L precursor [Oncorhynchus mykiss]
 gi|14582899|gb|AAK69706.1|AF358668_1 procathepsin L [Oncorhynchus mykiss]
          Length = 338

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/294 (41%), Positives = 164/294 (55%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G+  + L    F        R+    Y+   E K + + F
Sbjct: 50  RMVWEKNLKKIEIHNLEHTMGKHSYRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSLF 109

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +   L      K + +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 110 MEPNYLQAP---KAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQQFRKTGKLVSLSE 166

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YI+ N GLDTEE+YPY G D   C +  E      
Sbjct: 167 QNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSAANE 226

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  +  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+
Sbjct: 227 TGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECSSEELD--HGVL 284

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT +SYP+V
Sbjct: 285 VVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|2239109|emb|CAA70694.1| cathepsin S-like cysteine proteinase [Heterodera glycines]
          Length = 353

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/248 (45%), Positives = 155/248 (62%), Gaps = 9/248 (3%)

Query: 73  YESVEEMKLRFATFSKNLDLI---RSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGS 129
           Y  +  +++R      N+  +    ST  + L +R    ++ VKDQG CGSCW FS TG+
Sbjct: 108 YNRIRGLQMRSNRQRHNMATLAGNSSTLPEKLDWREKGAVTEVKDQGDCGSCWAFSATGA 167

Query: 130 LEAAYHQAFG-KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           +E A  Q    K ISLSEQ LVDC+  + N+GC+GGL   AFEY++ N GLDTEE+YPY 
Sbjct: 168 IEGALAQKKASKIISLSEQNLVDCSSKYGNEGCDGGLMDSAFEYVRDNNGLDTEESYPYE 227

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVY 247
              G C+F +E VG  V+   ++  G E++L+ AV  + P+SVA +  +  F+FYK+GVY
Sbjct: 228 AVTGKCQFKNETVGGTVVSFKDLKKGDEEQLKIAVATIGPISVALDASNLSFQFYKTGVY 287

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIA 305
               C N  +D  H V+ VGYG ++    YWL+KNSWG +WG++GY ++   K N CGIA
Sbjct: 288 YERWCSNRYLD--HGVLLVGYGTDETHGDYWLVKNSWGPHWGENGYIRIARNKQNHCGIA 345

Query: 306 TCASYPVV 313
           T ASYPVV
Sbjct: 346 TMASYPVV 353


>gi|348542776|ref|XP_003458860.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 107/233 (45%), Positives = 145/233 (62%), Gaps = 9/233 (3%)

Query: 83  FATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
           F    + +DL  + + +   Y     ++ VKDQ  CGSCW FS TG+LE  + +  G  +
Sbjct: 109 FLRLPEGIDLPDAVDWREQGY-----VTGVKDQKQCGSCWAFSATGALEGQHFRKTGILV 163

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQQLVDC+ A+ N+GCNGG    AF YI+ NGG+DTE +YPY  +D +C+++  +VG
Sbjct: 164 SLSEQQLVDCSGAYGNEGCNGGWMDSAFRYIEANGGIDTEASYPYEAEDWLCRYNPASVG 223

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNH 261
                 V++    E+ L+ AV  + PVSVA +     F+FY SGVY    C +  +D  H
Sbjct: 224 ATCSGYVDVNKYDEEALKEAVATIGPVSVAIDASHASFQFYTSGVYDEPGCSSIELD--H 281

Query: 262 AVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            V+AVGYG E+G  YWL+KNSWG  WG+ GY KM   K N CGIA+ ASYP+V
Sbjct: 282 GVLAVGYGTENGHDYWLVKNSWGRGWGEMGYIKMSRNKHNQCGIASAASYPLV 334


>gi|281206749|gb|EFA80934.1| counting factor associated protein [Polysphondylium pallidum PN500]
          Length = 530

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 163/304 (53%), Gaps = 52/304 (17%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F +F   Y K+Y   EE   RFAT+ +N ++I + N +  SY+L +N             
Sbjct: 227 FEQFKTTYDKVYAHDEEHSERFATYKQNREMIIAHNTQESSYKLAMNHFGDMTAEEFELK 286

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++ VKDQG CGSCWTF +TGSLE 
Sbjct: 287 IKPRVPRPDTNGAHDVHDNDRTINLPATVDWRQQGCVTRVKDQGVCGSCWTFGSTGSLEG 346

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
               A GK +SLSEQQLVDCA    +QGCNGG  S AF+YI   GG+  E  YPY  ++G
Sbjct: 347 VSCLATGKLVSLSEQQLVDCAYLGQSQGCNGGFASDAFQYIMNFGGIAYESTYPYLMQNG 406

Query: 193 VCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSST 250
            CK SS  +  ++V   VN+T  +E  LQ+AV  V PV++A +     FRFY SGVY S+
Sbjct: 407 YCKDSSSQLSNIKVKSYVNVTSFSEPALQNAVATVGPVAIAIDASAPDFRFYSSGVYYSS 466

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCAS 309
            C N   D++H V+AVGYG  +G  YW++KNSW  ++G  GY  M   + N CG+A+  +
Sbjct: 467 VCKNGLDDLDHEVLAVGYGTLNGADYWIVKNSWSTHYGAEGYILMSRNRGNNCGVASQPT 526

Query: 310 YPVV 313
           YPVV
Sbjct: 527 YPVV 530


>gi|389608655|dbj|BAM17937.1| cathepsin L [Papilio xuthus]
          Length = 341

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/348 (38%), Positives = 193/348 (55%), Gaps = 49/348 (14%)

Query: 8   VSSVILLLCCAAAASASASSFD----DSNPIRLVSSDGLRDFETSV-----LQVIGQARH 58
           + S+++LLC  AAASA  S FD    + N  ++   +  + +++ V     +++  + +H
Sbjct: 1   MRSLVILLCVVAAASA-VSFFDLVKEEWNAFKM---EHQKQYDSEVEDKFRMKIYAENKH 56

Query: 59  AL------------SFARFARRYGKI--YESVEEMKLRFATFSKNLDLI--RSTNCKGLS 102
            +            SF     +YG +  +E V  M   F   +KN   +  +S   +G +
Sbjct: 57  NIAKHNQKYARGEVSFRLKQNKYGDMLHHEFVHTMN-GFNKTTKNSKGLFGKSAGERGAT 115

Query: 103 YRLGLNI--------------SPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
           +    N+              + VKDQG CGSCW+FS+TG+LE  +++     +SLSEQ 
Sbjct: 116 FITPANVHLPDHVDWRKHGAVTEVKDQGKCGSCWSFSSTGALEGQHYRRTNILVSLSEQN 175

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           L+DC+ A+ N GCNGGL   AF+YIK N G+DTE++YPY G D  C+++ +N G      
Sbjct: 176 LIDCSAAYGNNGCNGGLMDNAFKYIKDNRGIDTEKSYPYEGIDDKCRYNPKNTGADDNGF 235

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           V+I  G E +L  AV  V PVSVA +     F+FY  GVY    C ++ +D  H V+ VG
Sbjct: 236 VDIPSGDEGKLMAAVATVGPVSVAIDASQSSFQFYSDGVYFDENCSSSSLD--HGVLVVG 293

Query: 268 YGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           YG  E+G  YWL+KNSWG +WGD GY KM   + N CGIAT ASYP+V
Sbjct: 294 YGTDENGGDYWLVKNSWGRSWGDLGYIKMARNRDNHCGIATAASYPLV 341


>gi|118424553|gb|ABK90824.1| cathepsin L-like cysteine proteinase [Spodoptera exigua]
          Length = 344

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 106/216 (49%), Positives = 142/216 (65%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG+LE  + +  G  +SLSEQ L+DC+ A+ N G
Sbjct: 131 VDWRKKGAVTDVKDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF+YIK NGG+DTE++YPY   D  C+++ +  G   +  V+I  G E++L 
Sbjct: 191 CNGGLMDNAFKYIKDNGGIDTEKSYPYEAVDDKCRYNPKESGADDVGFVDIPQGDEEKLM 250

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            AV  V P+SVA +   + F+FY  GVY    C +T  D++H V+ VGYG  EDG   WL
Sbjct: 251 QAVATVGPISVAIDASQETFQFYSKGVYYDENCSST--DLDHGVMVVGYGTEEDGSDDWL 308

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG +WG+ GY KM   K N CGIA+ ASYP+V
Sbjct: 309 VKNSWGRSWGELGYIKMARNKNNHCGIASSASYPLV 344


>gi|223646726|gb|ACN10121.1| Cathepsin L1 precursor [Salmo salar]
 gi|223672581|gb|ACN12472.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  210 bits (534), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/294 (41%), Positives = 164/294 (55%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G+  + L    F        R+    Y+   E K + + F
Sbjct: 50  RMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSLF 109

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +   L      K + +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 110 MEPNYLQAP---KAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQQFRKTGKLVSLSE 166

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YI+ N GLDTEE+YPY G D   C +  E  G   
Sbjct: 167 QNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSGANE 226

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  +  AV  V PVSVA +   + F+FY+ G+Y   +C +  +D  H V+
Sbjct: 227 TGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYEFGIYYEKECSSEELD--HGVL 284

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT +SYP+V
Sbjct: 285 VVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|16304178|gb|AAL16954.1|AF426414_1 cathepsin L-like cysteine protease precursor [Delia radicum]
          Length = 337

 Score =  210 bits (534), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+T +LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 122 KSVDWRQHGAVTAVKDQGHCGSCWAFSSTAALEGQHFRKAGVLVSLSEQNLVDCSTKYGN 181

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY G D  C F+   VG      V+I  G E+ 
Sbjct: 182 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFTKSGVGATDTGFVDIPQGDEEA 241

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPY 276
           L  AV  + PVSVA +   + F+ Y  GVY+  +C    +D  H V+ VGYG +  G+ Y
Sbjct: 242 LMKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDAQNLD--HGVLVVGYGTDKTGLDY 299

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD GY KM   + N CGIAT +SYP V
Sbjct: 300 WLVKNSWGTTWGDQGYIKMARNQDNQCGIATASSYPTV 337


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 111/218 (50%), Positives = 140/218 (64%), Gaps = 7/218 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTGS+E  + +A GK +SLSEQ LVDC+    +
Sbjct: 120 KTVDWRTKGYVTPVKDQGQCGSCWAFSTTGSVEGQHFKATGKLVSLSEQNLVDCSG--RD 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GG   +AF+YI   GG+DTE +YPY   DG C F   NVG  V    ++T G+E  
Sbjct: 178 AGCDGGFMDRAFQYIIDAGGIDTEASYPYKAVDGKCHFKKANVGATVTGYTDVTSGSEKA 237

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           LQ AV  V P+SVA +     F+ YKSGVY+   C +T +D  H V+AVGYG   DG  Y
Sbjct: 238 LQKAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCDSTVLD--HGVLAVGYGTSSDGTDY 295

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSW E WG +GY  M   K N CGIAT ASYP+V
Sbjct: 296 WIVKNSWAETWGMNGYVWMSRNKDNQCGIATNASYPLV 333


>gi|55740404|gb|AAV63978.1| cathepsin L2 precursor [Artemia franciscana]
          Length = 226

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 105/215 (48%), Positives = 137/215 (63%), Gaps = 2/215 (0%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK QG C SCW FS+TG+LE+   +  GK ISLSEQ L+DC+  + N G
Sbjct: 12  VDWREKGAVTPVKYQGQCASCWAFSSTGALESQTFRKTGKLISLSEQNLIDCSGEYGNLG 71

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  SQAFEYIK N G+DTE  Y Y  K+  C+ +  N G   L  VNI  G ED+L+
Sbjct: 72  CKGGWISQAFEYIKDNKGIDTENKYHYEAKENFCRDNPRNRGAVALGFVNIPSGEEDKLK 131

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVS   +V  +GF+FY  GVY    C  +   +NHAV+ +GYG ++G  YWL+
Sbjct: 132 AAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCKTSFEHLNHAVLVIGYGSDNGEDYWLV 191

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSW ++WGD GY K+    KN CG+AT A YP+V
Sbjct: 192 KNSWSKHWGDEGYLKIARNRKNHCGVATAALYPIV 226


>gi|384941728|gb|AFI34469.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/274 (43%), Positives = 152/274 (55%), Gaps = 22/274 (8%)

Query: 55  QARHALSFARFA------RRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGLSYRL 105
           Q +H  + A  A        + ++       KLR     +    LDL +S + +   Y  
Sbjct: 68  QGKHGFAMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPLFLDLPKSVDWRKKGY-- 125

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGCNGG 
Sbjct: 126 ---VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGF 182

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
            + AF Y+K NGGLD+EE+YPY   DG+CK+ SEN          +  G E  L  AV  
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAMDGICKYRSENSVANDTGFEVVPAGKEKALMKAVAT 242

Query: 226 VRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIK 280
           V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    D   YWL+K
Sbjct: 243 VGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSDNNKYWLVK 300

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 301 NSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|109112413|ref|XP_001106814.1| PREDICTED: cathepsin L2 isoform 3 [Macaca mulatta]
 gi|297271422|ref|XP_002800251.1| PREDICTED: cathepsin L2 [Macaca mulatta]
          Length = 334

 Score =  209 bits (533), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/274 (43%), Positives = 151/274 (55%), Gaps = 22/274 (8%)

Query: 55  QARHALSFARFA------RRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGLSYRL 105
           Q +H  + A  A        + ++       KLR     +    LDL +S + +   Y  
Sbjct: 68  QGKHGFTMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPLFLDLPKSVDWRKKGY-- 125

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    NQGCNGG 
Sbjct: 126 ---VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSHPQGNQGCNGGF 182

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
            + AF Y+K NGGLD+EE+YPY   DG+CK+ SEN          +  G E  L  AV  
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAMDGICKYRSENSVANDTGFKVVPAGKEKALMKAVAT 242

Query: 226 VRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIK 280
           V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    D   YWL+K
Sbjct: 243 VGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSDNNKYWLVK 300

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 301 NSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|21953244|emb|CAD42716.1| putative cathepsin L [Myzus persicae]
          Length = 341

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 151/235 (64%), Gaps = 8/235 (3%)

Query: 85  TFSKNLDLIRSTNC---KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
           T  + +  ++S N    K + +R    ++PVK+QG CGSCW+FS TGSLE  + +  G  
Sbjct: 109 TNDEGVTFLKSENVVIPKSIDWRKKGYVTPVKNQGQCGSCWSFSATGSLEGQHFRKTGVL 168

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           +SLSEQ L+DC++ + N GC GGL   AF+YIK N GLDTE++YPY  +D  C+++ +N 
Sbjct: 169 VSLSEQNLIDCSRKYGNNGCEGGLMDLAFKYIKSNKGLDTEKSYPYEAEDDKCRYNPDNS 228

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVN 260
           G      V+I  G E+ L HA+  V PVS+A +   + F+FYK GV+ + +C +T +D  
Sbjct: 229 GATDNGFVDIPEGDEEALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCSSTELD-- 286

Query: 261 HAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           H V+AVG+  +  G  YW++KNSWG+ WGD GY  M    KN CG+A+ ASYP+V
Sbjct: 287 HGVLAVGFRTDKKGGDYWIVKNSWGKTWGDEGYIMMARNKKNNCGVASSASYPLV 341


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/265 (41%), Positives = 161/265 (60%), Gaps = 8/265 (3%)

Query: 54  GQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GLSYRLGLNIS 110
           G+  + L    F       ++++ ++K R A    + ++ R+T  K    + +R    ++
Sbjct: 67  GEVSYKLKMNHFGDLMQHEFKALNKLK-RSAKQQNSGEVFRATGGKLPAKVDWRQKGAVT 125

Query: 111 PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAF 170
           PVKD G CGSCW FS+TGSL         K +SLSEQQLVDC+  + N GC+GG+  QAF
Sbjct: 126 PVKDPGQCGSCWAFSSTGSLGGQLFLKNKKLVSLSEQQLVDCSGNYGNDGCDGGIMVQAF 185

Query: 171 EYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVS 230
           +YIK NGG+DTE +YPY  +D  C++ +++V       V+I  G E+ L+ AV  + P+S
Sbjct: 186 QYIKGNGGIDTEGSYPYEAEDDKCRYKTKSVAGTDKGYVDIAQGDENALKEAVAEIGPIS 245

Query: 231 VAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGD 289
           VA +  +  F+FY  G+Y    C NT +D  H V+ VGYG E+G  YWL+KNSWG +WG+
Sbjct: 246 VAIDAGNLSFQFYSEGIYDEPFCSNTELD--HGVLVVGYGTENGQDYWLVKNSWGPSWGE 303

Query: 290 HGYFKMEMG-KNMCGIATCASYPVV 313
           +GY K+     N CGIA+ ASYP+V
Sbjct: 304 NGYIKIARNHNNHCGIASMASYPIV 328


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/315 (38%), Positives = 159/315 (50%), Gaps = 62/315 (19%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLN------- 108
           +++ +F   + K+Y  +EE  LR   F+ N   I+  N        S+ +G+N       
Sbjct: 39  VAWHKFKLEHNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTVGVNEFADMTV 98

Query: 109 ------------------------------------------ISPVKDQGHCGSCWTFST 126
                                                     +S VK+QG CGSCW FST
Sbjct: 99  HEFAQMMNGLKPDSTRVSGSTYLSPNIDAPLPVEVDWRTKGLVSEVKNQGSCGSCWAFST 158

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
           TGSLE  + +  G  + LSEQ LVDC+ ++ N GCNGGL + AF+YIK N G+DTEEAYP
Sbjct: 159 TGSLEGQHMRKTGTMVDLSEQNLVDCSTSYGNDGCNGGLMTNAFKYIKDNKGIDTEEAYP 218

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
           Y G+DG CKF    VG  V   V I  G E +LQ A+  V PVSVA +     F  YKSG
Sbjct: 219 YAGRDGDCKFKKNKVGATVTGFVEIPAGNEKKLQEALATVGPVSVAIDANHQSFMLYKSG 278

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK------ 299
           VY   +C +  +D  H V+AVGYG   G  Y+++KNSWG  WG+ GY +           
Sbjct: 279 VYDEPECDSAQLD--HGVLAVGYGSIHGKDYYIVKNSWGTTWGEQGYIRFSTTAVPDAIG 336

Query: 300 NMCGIATCASYPVVA 314
            +CGI   ASYPV+A
Sbjct: 337 GICGILLDASYPVIA 351


>gi|34850847|dbj|BAC87861.1| cathepsin L [Engraulis japonicus]
          Length = 336

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 166/294 (56%), Gaps = 20/294 (6%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    LR  E   L+  +G   + L    F        R+    Y+   E +++ + F
Sbjct: 48  RVVWEKNLRKIEMHNLEHSMGAHSYRLGMNHFGDMTHEEFRQVMNGYKHKAERRVKGSLF 107

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
            +  + I +   K + YR     +PVKDQG CGSCW FSTTG++E    +  GK +SLSE
Sbjct: 108 MEP-NFIEAP--KKIDYRDLGYATPVKDQGQCGSCWAFSTTGAMEGQLFREGGKLVSLSE 164

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQV 205
           Q LVDC++   N+GCNGGL  QAF+YIK NGGLDTE+AYPY G D   C +  +      
Sbjct: 165 QNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDTEDAYPYLGTDDQDCHYDPKYSAAND 224

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
              V+I  G E  L  AV  V PVSVA +   + F+FY SG+Y   +C +T +D  H V+
Sbjct: 225 TGFVDIPEGKERALMKAVAAVGPVSVAIDAGHECFQFYHSGIYFEKECSSTELD--HGVL 282

Query: 265 AVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT ASYP++
Sbjct: 283 VVGYGFEGEDVDGKKYWIVKNSWSEKWGDEGYIYMAKDRKNHCGIATAASYPLM 336


>gi|330805277|ref|XP_003290611.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
 gi|325079250|gb|EGC32859.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
          Length = 330

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/263 (43%), Positives = 155/263 (58%), Gaps = 12/263 (4%)

Query: 56  ARHALSFARFA----RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISP 111
           ++  L   +FA      Y KIY      K+  A    N ++I  T    + +R    +S 
Sbjct: 72  SKTVLGLTQFADLTNEEYRKIYLGT---KVNVAPEKHNFNMIHFTGPDSIDWRTKGAVSH 128

Query: 112 VKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFE 171
           VKDQG CGSCW+FSTTGS+E A+    G  ++LSEQ LVDC+  F N GC+GGL   AF+
Sbjct: 129 VKDQGQCGSCWSFSTTGSVEGAHQIKTGNMVTLSEQNLVDCSGKFGNNGCDGGLMVNAFK 188

Query: 172 YIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSV 231
           +I   GG+ TE++YPY    G CKF+   VG  +     IT G+E ELQ A+   +PVS+
Sbjct: 189 FIMSQGGVATEDSYPYNAVQGKCKFTKSMVGANISGYKEITQGSELELQAAL-TKQPVSI 247

Query: 232 AFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDH 290
           A +     F+ YKSGVY   +C +  +D  H V+AVGYG E+G  Y+++KNSW ++WG  
Sbjct: 248 AIDASQQSFQLYKSGVYDEPECSSYQLD--HGVLAVGYGTENGKDYYIVKNSWADSWGQD 305

Query: 291 GY-FKMEMGKNMCGIATCASYPV 312
           GY F     KN CG+AT ASYP+
Sbjct: 306 GYIFMSRNAKNQCGVATMASYPI 328


>gi|299507656|gb|ADJ21807.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 167/296 (56%), Gaps = 24/296 (8%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G+  + L    F        R+    Y+   E K + + F
Sbjct: 48  RMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMTHEEFRQIMNGYKRKSERKFKGSLF 107

Query: 87  SKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
            +   L+  RS + +   Y     ++PVKDQG CGSCW FSTTG++E  + +  GK +SL
Sbjct: 108 MEPNFLEAPRSVDWRDNGY-----VTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGKLVSL 162

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGV 203
           SEQ LVDC++   N+GCNGGL  QAF+YIK N GLD+E++YPY G D   C +  +    
Sbjct: 163 SEQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSA 222

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHA 262
                ++I  G E  L  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H 
Sbjct: 223 NDTGFIDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HG 280

Query: 263 VVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           V+ VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 281 VLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|151176971|gb|ABR88030.1| digestive cysteine protease [Dermestes frischii]
          Length = 339

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 140/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++ VKDQGHCGSCW+FS TG+LE  + +   K +SLSEQ LVDC+  F N
Sbjct: 124 ENVDWREHGAVTXVKDQGHCGSCWSFSATGALEGQHFRKTNKLVSLSEQNLVDCSTKFGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+Y+KYN G+DTE +YPY   D  C ++ +  G      V+I  G E++
Sbjct: 184 DGCNGGLMDNAFKYVKYNHGIDTEASYPYHADDEKCHYNPKTSGATDRGFVDIPTGDEEK 243

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L  AV  V PVSVA +   + F+ Y  GVY   +C +  +D  H V+ VGYG  E+G  Y
Sbjct: 244 LMAAVATVGPVSVAIDASHESFQLYSEGVYYDPECSSEELD--HGVLVVGYGTDENGQDY 301

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSWGE+WG+ GY KM   + N CGIAT ASYP+V
Sbjct: 302 WIVKNSWGESWGEQGYIKMARNRDNNCGIATQASYPLV 339


>gi|449679414|ref|XP_002161570.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 353

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/305 (38%), Positives = 161/305 (52%), Gaps = 53/305 (17%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           + RF  ++GK Y + +E   ++  + KN + I + N +  S+ +G+N             
Sbjct: 49  WRRFKIKFGKFYSNQDEETSKYLNWKKNNENIINHNSENHSFEIGINQFSDLTHEEFMKI 108

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVK+QG C SCW FSTTG+LE
Sbjct: 109 HGGCLKLSKSIVNFTKEFSLPNKVNIPDKVDWRTEGYVTPVKNQGLCRSCWAFSTTGALE 168

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
               +  G   +LSEQ LVDC++++ NQGC+GG  + AFEYIK N GLD+E  YPY  K+
Sbjct: 169 GQTFRKTGILPTLSEQNLVDCSKSYGNQGCDGGWTNNAFEYIKDNDGLDSENGYPYDAKE 228

Query: 192 -GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSS 249
            G C +  +         V I  G ED L+ AV  V P++V  +     F+ YKSGVY+ 
Sbjct: 229 LGYCYYDEKYKEASDSGFVEIPYGDEDALKEAVATVGPIAVNIDASKPSFQSYKSGVYNE 288

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
             CGN   ++ HAV+ VGYG E G  +WL+KNSWG+ WGDHGY KM   K N CGIAT A
Sbjct: 289 PTCGNGITNLTHAVLVVGYGTEKGHKFWLVKNSWGKTWGDHGYIKMSRNKSNQCGIATRA 348

Query: 309 SYPVV 313
           S+P+V
Sbjct: 349 SFPLV 353


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 177/341 (51%), Gaps = 38/341 (11%)

Query: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDF--ETSVLQVIGQARHALSFAR 64
           L++ +I L+    A S S    ++ N  +L       D   ET  +++  + +H +  A+
Sbjct: 5   LITLLIALVAMTQAVSYSELVREEWNTFKLEHRKNYADSTEETFRMKIFNENKHHI--AK 62

Query: 65  FARRY--GKI--------YESVEEMKLRFATFSKNLDL---IRSTN-------------- 97
             +RY  G++        Y  +   + R      N  L   +RST+              
Sbjct: 63  HNQRYATGEVSYKLALNKYADMLHHEFRETMNGFNYTLHKQLRSTDESFTGVTFISPEHV 122

Query: 98  --CKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA 155
                + +R    ++ VKDQGHCGSCW FS+TG++E  + +  G  +SLSEQ LVDC+  
Sbjct: 123 KLPTAVDWRTKGAVTEVKDQGHCGSCWAFSSTGAIEGQHFRKSGTLVSLSEQNLVDCSTK 182

Query: 156 FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGA 215
           + N GCNGGL   AF Y+K NGG+DTE++Y Y G D  C F   ++G       +I  G 
Sbjct: 183 YGNNGCNGGLMDNAFRYVKDNGGIDTEKSYAYEGIDDSCHFDKNSIGATDRGFADIPQGN 242

Query: 216 EDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DG 273
           E +L  AV  + PVSVA +     F+FY  GVY    C    +D  H V+ VGYG E DG
Sbjct: 243 EKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCSAENLD--HGVLVVGYGTEKDG 300

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 301 SDYWLVKNSWGTTWGDKGFIKMSRNKENQCGIASASSYPLV 341


>gi|388509526|gb|AFK42829.1| unknown [Lotus japonicus]
          Length = 333

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 158/309 (51%), Gaps = 60/309 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN--------- 108
           +A F   +GK Y + EE+  R A +  N+ +IR  N +   GL +Y LGLN         
Sbjct: 28  WALFKTTFGKQYSTAEEITRRLA-WEANVAIIRQHNLEHDLGLHTYTLGLNNYADLTNAE 86

Query: 109 ------------------------------------------ISPVKDQGHCGSCWTFST 126
                                                     ++P+KDQG CGSCW FS+
Sbjct: 87  FNQVMNGLRVNASQTKSANRRTYVAPVGVELPTSVDWRTKGYVTPIKDQGQCGSCWAFSS 146

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
           TGSLE  +    G+ +SLSEQ L DC+Q   N GCNGGL  QAF YIK N G+DTE +YP
Sbjct: 147 TGSLEGQHFAKTGQLVSLSEQNLTDCSQKQGNMGCNGGLMDQAFTYIKENNGIDTESSYP 206

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
           Y   D  C F + +VG       +I    E+ LQ A+  V P+SVA +     F+ Y+SG
Sbjct: 207 YKAVDEKCHFKAADVGATDTGYTDIAQQDENALQSAIATVGPISVAIDASHSSFQLYRSG 266

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGI 304
            Y+   C  T +D  H V+AVGY  EDG  Y+++KNSWG +WG  GY  M   K N CGI
Sbjct: 267 AYNERACSATQLD--HGVLAVGYDSEDGKDYYIVKNSWGTSWGQKGYIWMTRNKNNQCGI 324

Query: 305 ATCASYPVV 313
           AT ++YP V
Sbjct: 325 ATMSTYPTV 333


>gi|443685370|gb|ELT89004.1| hypothetical protein CAPTEDRAFT_95613, partial [Capitella teleta]
          Length = 295

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 104/215 (48%), Positives = 136/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS  G+LE  + +  GK +SLSEQ LVDC++++ N G
Sbjct: 83  VDWRKKGYVTPVKNQGQCGSCWAFSAIGALEGQHFRKTGKLVSLSEQNLVDCSKSYGNNG 142

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG+   AF+YIK N G DTE  YPY   DG+C+F  E VG       ++  G E +++
Sbjct: 143 CNGGVMDYAFKYIKDNDGDDTEACYPYEAVDGMCRFKRECVGATCRGYTDLPWGNEVKMK 202

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV LV PVSVA +     F  YK GVY   +C  +P  ++H V+ VGYG E G+ YWL+
Sbjct: 203 EAVALVGPVSVAIDASHSSFMSYKGGVYVEKEC--SPYQLDHGVLVVGYGTEQGLDYWLV 260

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSWG  WGD GY KM     N CGIA+ A YP+V
Sbjct: 261 KNSWGTTWGDQGYIKMARNMHNHCGIASMACYPLV 295


>gi|391338876|ref|XP_003743781.1| PREDICTED: cathepsin L-like isoform 4 [Metaseiulus occidentalis]
          Length = 336

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 141/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QGHCGSCW+FSTTG+LE    +  G+ +SLSEQ L+DC+ ++ N
Sbjct: 121 KSVDWREKGAVTPVKNQGHCGSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSYGN 180

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF YIK N G+DTEE+YPY GK G C++  E+   +    V+I  G E  
Sbjct: 181 NGCGGGLMDNAFTYIKENHGIDTEESYPYEGKQGKCRYHKEDSAGRDTGFVDIPSGNERA 240

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPY 276
           L  A+  + PVSVA +   + F+FY  GVY+   C +  +D  H V+AVGYG  +DG  Y
Sbjct: 241 LAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCDSHSLD--HGVLAVGYGTTDDGQDY 298

Query: 277 WLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           ++IKNSWGE WG  GY  M    KN CG+AT ASYP+V
Sbjct: 299 YIIKNSWGERWGQEGYVLMARNSKNECGVATQASYPLV 336


>gi|391338870|ref|XP_003743778.1| PREDICTED: cathepsin L-like isoform 1 [Metaseiulus occidentalis]
 gi|391338872|ref|XP_003743779.1| PREDICTED: cathepsin L-like isoform 2 [Metaseiulus occidentalis]
 gi|391338874|ref|XP_003743780.1| PREDICTED: cathepsin L-like isoform 3 [Metaseiulus occidentalis]
          Length = 331

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 141/218 (64%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QGHCGSCW+FSTTG+LE    +  G+ +SLSEQ L+DC+ ++ N
Sbjct: 116 KSVDWREKGAVTPVKNQGHCGSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSYGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF YIK N G+DTEE+YPY GK G C++  E+   +    V+I  G E  
Sbjct: 176 NGCGGGLMDNAFTYIKENHGIDTEESYPYEGKQGKCRYHKEDSAGRDTGFVDIPSGNERA 235

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPY 276
           L  A+  + PVSVA +   + F+FY  GVY+   C +  +D  H V+AVGYG  +DG  Y
Sbjct: 236 LAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCDSHSLD--HGVLAVGYGTTDDGQDY 293

Query: 277 WLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           ++IKNSWGE WG  GY  M    KN CG+AT ASYP+V
Sbjct: 294 YIIKNSWGERWGQEGYVLMARNSKNECGVATQASYPLV 331


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/206 (50%), Positives = 136/206 (66%), Gaps = 4/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+K+QG CGSCW+FS+TGSLE  +    G  +SLSEQQL+DC+  + N GCNGGL   
Sbjct: 121 VTPIKNQGQCGSCWSFSSTGSLEGQHFINTGTLVSLSEQQLMDCSTKYGNHGCNGGLMDN 180

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           +F Y+K   G +TE+ YPYT ++GVC++ S    V     V+I  G ED L+ AV  V P
Sbjct: 181 SFRYLKSVAGDETEDNYPYTAENGVCRYDSSLAVVTDKSYVDIPQGDEDSLKDAVANVGP 240

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y SGVY ++ C +T +D  H V+A+GYG EDG  YWL+KNSWG +W
Sbjct: 241 ISVAIDASHSSFQLYNSGVYYASTCSSTQLD--HGVLAIGYGTEDGKDYWLVKNSWGTSW 298

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPV 312
           G  GY KM   + N CGIAT ASYP 
Sbjct: 299 GMEGYIKMSRNRNNNCGIATQASYPT 324


>gi|342305188|dbj|BAK55648.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 167/296 (56%), Gaps = 24/296 (8%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L+  +G+  + L    F        R+    Y+   E K + + F
Sbjct: 48  RMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMTHEEFRQIMYGYKRKSERKFKGSLF 107

Query: 87  SKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
            +   L+  RS + +   Y     ++PVKDQG CGSCW FSTTG++E  + +  GK +SL
Sbjct: 108 MEPNFLEAPRSVDWRDNGY-----VTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGKLVSL 162

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGV 203
           SEQ LVDC++   N+GCNGGL  QAF+YIK N GLD+E++YPY G D   C +  +    
Sbjct: 163 SEQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSA 222

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHA 262
                ++I  G E  L  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H 
Sbjct: 223 NDTGFIDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HG 280

Query: 263 VVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           V+ VGYG E    DG  YW++KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 281 VLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 166/306 (54%), Gaps = 61/306 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KG-LSYRLGLN------------ 108
           F  +Y ++Y+S  E + R   F++N   I   N    KG +SY +G+N            
Sbjct: 70  FLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAFSDKTNSELDV 129

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVK+QG CGSCW FS TG +E  
Sbjct: 130 LRGFRHSSKASRSGSQYIPFDAAPPAEVDWRTKGAVTPVKNQGDCGSCWAFSATGGIEGQ 189

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY----TG 189
           ++ A GK +SLSEQQLVDC+ +  N GC+GGL   AFEY+K + G+DTE  YPY    TG
Sbjct: 190 HYLATGKLVSLSEQQLVDCSSS--NDGCDGGLMDLAFEYVKEHKGIDTEVHYPYVSGNTG 247

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYS 248
               C F  +   V V   V+I  G E  LQ AVG   P+SV     +  F  Y+SG+YS
Sbjct: 248 YARQCSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPISVGINAGLPSFMAYESGIYS 307

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK-MEMGKNMCGIATC 307
             +C   P D++H V+ VGYGV++GVPYWLIKNSWGE+WG++GY + +    N+CG+AT 
Sbjct: 308 DHRC--NPHDLDHGVLVVGYGVDNGVPYWLIKNSWGEDWGENGYVRILRNHNNLCGVATM 365

Query: 308 ASYPVV 313
           ASYP++
Sbjct: 366 ASYPLM 371


>gi|2706547|emb|CAA75862.1| putative cathepsin L [Xenopus laevis]
          Length = 231

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/222 (48%), Positives = 144/222 (64%), Gaps = 9/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW  STTG+LE  +++   K ISLSEQ LVDC++A  N
Sbjct: 12  KSVDWRKKGYVTPVKDQGQCGSCWAPSTTGALEGQHYRKTSKLISLSEQNLVDCSRAQGN 71

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K NGG+D+E++YPYT KD   C +   N        V++  G E 
Sbjct: 72  EGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNNNSANDTGFVDVQSGCEK 131

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
           +L  AV  V PVSVA +     F+FY+SG+Y   +C  +  D++H V+ VGYG E    D
Sbjct: 132 DLMKAVASVGPVSVAIDAGHQSFQFYQSGIYYEPEC--SSEDLDHGVLVVGYGFESEDVD 189

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  YW++KNSW E WGD+GY  +   + N CGIAT ASYP+V
Sbjct: 190 GKKYWIVKNSWSEKWGDNGYINIAKDRHNHCGIATAASYPLV 231


>gi|340368362|ref|XP_003382721.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/257 (45%), Positives = 155/257 (60%), Gaps = 11/257 (4%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L+ A F+  Y    +++E      + FS +L   R+     L +R    ++ VK+QG CG
Sbjct: 80  LTSAEFSSLYNGYRQNLETSG---SVFSSSL---RNAMPSSLDWRDKKVVTDVKNQGKCG 133

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FSTTGSLE  +    G  +SLSEQQL+DC+  + N GC+GG    AF+YIK  GG 
Sbjct: 134 SCWAFSTTGSLEGLHALKTGHLVSLSEQQLMDCSVKYGNNGCDGGNMRSAFQYIKDAGGD 193

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDG 238
           DTEE+YPYT K+  C+F  + VG      V I  G E  L HA+  V P+SVA +  +  
Sbjct: 194 DTEESYPYTAKNESCRFDPKKVGATDEGYVRIPSGDEVSLMHALYEVGPISVAMDAGLKT 253

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGENWGDHGYFKM-E 296
           F+FYK G+YS   C NT +  NH V  +GYG   DG PYWL+KNSWG++WG  GYF +  
Sbjct: 254 FQFYKKGIYSDYLCSNTHL--NHGVTLIGYGESSDGSPYWLVKNSWGKDWGIDGYFMLAR 311

Query: 297 MGKNMCGIATCASYPVV 313
              NMCG+AT ASYP++
Sbjct: 312 YVGNMCGVATDASYPIL 328


>gi|344953542|gb|AEN28617.1| cathepsin L-like cysteine protease [Epinephelus coioides]
          Length = 336

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/341 (38%), Positives = 179/341 (52%), Gaps = 39/341 (11%)

Query: 7   LVSSVILLLCCAAAASASA--SSFDDSNPI-----------------RLVSSDGLRDFET 47
           ++   ++ LC +AA SA +     DD   +                 R+V    L+  E 
Sbjct: 1   MLPLAVVALCLSAALSAPSLDPQLDDHWELWKSWHSKKYHEKEEGWRRMVWEKNLKKIEL 60

Query: 48  SVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK 99
             L+  +G   + L    F        R+    Y+   E K R + F   L+       K
Sbjct: 61  HNLEHSMGTHSYRLGMNHFGDMTHEEFRQLMNGYKRKAETKARGSLF---LEPNFLEAPK 117

Query: 100 GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQ 159
            + +R    ++PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++   N+
Sbjct: 118 SVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSRPEGNE 177

Query: 160 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDE 218
           GCNGGL  QAF+Y+K N GLD+E++YPY G D   C +      V     V+I  G E  
Sbjct: 178 GCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPTYNSVNDTGFVDIPSGKERA 237

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+ VGYG +    DG
Sbjct: 238 LMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVLVVGYGFQGEDVDG 295

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YW++KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 296 KKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|228245|prf||1801240C Cys protease 3
          Length = 321

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 104/217 (47%), Positives = 136/217 (62%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+  + N
Sbjct: 107 RDVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGN 166

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GG  + AF+YIK NGG+DTE +YPY  +D  C+F + ++G     SV I    E+ 
Sbjct: 167 DGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEIVQHTEEA 226

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           LQ AV  V P+SVA +     F+FY SGVY    C  +P  ++H V+AVGYG E    YW
Sbjct: 227 LQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNC--SPTFLDHGVLAVGYGTESTKDYW 284

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG +WGD GY KM   + N CGIA+  SYP V
Sbjct: 285 LVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321


>gi|402898110|ref|XP_003912074.1| PREDICTED: cathepsin L2 [Papio anubis]
          Length = 334

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/274 (42%), Positives = 151/274 (55%), Gaps = 22/274 (8%)

Query: 55  QARHALSFARFA------RRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGLSYRL 105
           Q +H  + A  A        + ++       KLR     +    LDL +S + +   Y  
Sbjct: 68  QGKHGFTMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPLFLDLPKSVDWRKKGY-- 125

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGCNGG 
Sbjct: 126 ---VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGF 182

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
            + AF Y+K NGGLD+EE+YPY   DG+CK+  EN          +  G E  L  AV  
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAMDGICKYRPENSVANDTGFEVVPAGKEKALMKAVAT 242

Query: 226 VRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIK 280
           V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    D   YWL+K
Sbjct: 243 VGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSDNNKYWLVK 300

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 301 NSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 156 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 215

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 216 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKK 275

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 276 MAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 333

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 334 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 371


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 160 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 219

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 220 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKK 279

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 280 MAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 337

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 338 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 375


>gi|74765984|sp|Q24940.1|CATLL_FASHE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|497700|gb|AAA29136.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL+
Sbjct: 172 CSGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG  RP +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGARRPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGTYWGERGYIRMARNRGNMCGIASLASLPMVA 323


>gi|157278115|ref|NP_001098156.1| cathepsin L precursor [Oryzias latipes]
 gi|50251128|dbj|BAD27581.1| cathepsin L [Oryzias latipes]
          Length = 336

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/296 (41%), Positives = 169/296 (57%), Gaps = 24/296 (8%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           RLV    LR  E   L+  +G+  + L    F        R+    Y+  E+ K   + F
Sbjct: 48  RLVWEKNLRKIELHNLEHSMGKHSYRLGMNHFGDMTHEEFRQIMNGYKRREQRKYSGSLF 107

Query: 87  SKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
            +   L+  R+ + +   Y     ++PVKDQG CGSCW FSTTG+LE    +  GK +SL
Sbjct: 108 MEPNFLEAPRAVDWRDKGY-----VTPVKDQGQCGSCWAFSTTGALEGQQFRKTGKLVSL 162

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGV 203
           SEQ LVDC++   N+GCNGGL  QAF+Y+K N GLD+E+ YPY G D   C+++++   V
Sbjct: 163 SEQNLVDCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDFYPYKGTDDQPCQYNAQYSAV 222

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHA 262
                V+I  G E  L  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H 
Sbjct: 223 NDTGFVDIPSGKERALMKAVASVGPVSVAIDAGHESFQFYQSGIYFEKECSSDELD--HG 280

Query: 263 VVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           V+ VGYG E    DG  YW++KNSW E WGD G+  M   + N CGIAT ASYP+V
Sbjct: 281 VLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGFIYMAKDRHNHCGIATAASYPLV 336


>gi|281203744|gb|EFA77940.1| hypothetical protein PPL_08585 [Polysphondylium pallidum PN500]
          Length = 505

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 162/338 (47%), Gaps = 79/338 (23%)

Query: 52  VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--- 108
           +  + ++   F  +  R+ K Y+ V E K RF+ F  N+D + S N K     LGLN   
Sbjct: 171 LFSEEQYKNEFENWIDRFEKKYD-VSEFKKRFSIFKSNMDFVHSWNSKNSQTVLGLNHLA 229

Query: 109 ------------------------------------------------ISPVKDQGHCGS 120
                                                           +SP+KDQG CGS
Sbjct: 230 DLTNLEYRQFYLGTHKKAVLGTPGNHEVSNLQSVFGDSATVDWRQKGAVSPIKDQGQCGS 289

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLD 180
           CW+FSTTGS+E A+    G  + LSEQ LVDC+ +  N GCNGGL   AFEYI  N G+D
Sbjct: 290 CWSFSTTGSVEGAHQIKSGNMVELSEQNLVDCSTSEGNMGCNGGLMDYAFEYIITNNGID 349

Query: 181 TEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DG 238
           TE +YPYT   G  CK++  N G  +    NIT G+E +L  AV    PVSVA +   + 
Sbjct: 350 TESSYPYTASSGTTCKYNKANSGATISSYKNITAGSESDLADAVKNAGPVSVAIDASHNS 409

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG----------------------VEDGVPY 276
           F+ Y  G+Y    C +  +D  H V+ VGYG                       +D   Y
Sbjct: 410 FQLYSHGIYYDASCSSVNLD--HGVLVVGYGSGTPDSDSRVHKGSQVRVKVPKTDDTKNY 467

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSWG +WGD G+  M   + N CGIA+CASYP+V
Sbjct: 468 WIVKNSWGTSWGDKGFIYMSKDRDNNCGIASCASYPIV 505


>gi|348531517|ref|XP_003453255.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 330

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 103/217 (47%), Positives = 144/217 (66%), Gaps = 5/217 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VK Q  CGSCW FS TG+LE  + +  G  + LSEQQLVDC++ + N
Sbjct: 117 KTVDWREQGYVTDVKHQQQCGSCWAFSATGALEGQHFKKTGTLVPLSEQQLVDCSRKYRN 176

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GG P+ AF+YI+ NGG+DTE++Y Y  KDG C++ S ++G +    V+++   E+ 
Sbjct: 177 NGCDGGEPNWAFQYIRDNGGVDTEKSYRYEAKDGQCRYRSNSIGAKCNGYVDVS-PFEEA 235

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L  AV  + P+SV+ +     F+ Y+SGVY    C N  +++NHAV+AVGYG E+G  YW
Sbjct: 236 LMEAVATIGPISVSIDDSRVSFQLYQSGVYDEPWCSN--INLNHAVLAVGYGTENGHDYW 293

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WG+ GY KM   K N CGIAT ASYP+V
Sbjct: 294 LVKNSWGSGWGNKGYIKMTRNKGNQCGIATEASYPLV 330


>gi|355567966|gb|EHH24307.1| Cathepsin L2 [Macaca mulatta]
 gi|355753494|gb|EHH57540.1| Cathepsin L2 [Macaca fascicularis]
 gi|380790509|gb|AFE67130.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/274 (42%), Positives = 150/274 (54%), Gaps = 22/274 (8%)

Query: 55  QARHALSFARFA------RRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGLSYRL 105
           Q +H  + A  A        + ++       KLR     +    LDL +S + +   Y  
Sbjct: 68  QGKHGFAMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFREPLFLDLPKSVDWRKKGY-- 125

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    NQGCNGG 
Sbjct: 126 ---VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSHPQGNQGCNGGF 182

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
            + AF Y+K NGGLD+EE+YPY   DG+CK+  EN          +  G E  L  AV  
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAMDGICKYRPENSVANDTGFEVVPAGKEKALMKAVAT 242

Query: 226 VRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIK 280
           V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    D   YWL+K
Sbjct: 243 VGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSDNNKYWLVK 300

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 301 NSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 126 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 246 MAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  +++  G  +SLSEQ LVDC+  + N
Sbjct: 202 KSVDWRDKGAVTGVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLVDCSTKYGN 261

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   +G      V+I  G E +
Sbjct: 262 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEALDDSCHFNKGTIGATDRGFVDIPQGNEKK 321

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L  AV  + PVSVA +   + F+FY  GVY    C    +D  H V+ VG+G  E G  Y
Sbjct: 322 LAEAVATIGPVSVAIDASHESFQFYSEGVYVEPACDAQNLD--HGVLVVGFGTDESGQDY 379

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 380 WLVKNSWGTTWGDKGFIKMLRNKDNQCGIASASSYPLV 417


>gi|305434756|gb|ADM53740.1| cathepsin L1 precursor [Lepeophtheirus salmonis]
          Length = 325

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FSTTGS+E  Y     K +S SEQQLVDC+  F N+GCNGG    
Sbjct: 119 VTAVKDQKDCGSCWAFSTTGSVEGQYFIKNKKLLSFSEQQLVDCSSDFRNEGCNGGWMDN 178

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+  N G+ TE+ YPYT  DGVC ++      ++    ++  G+ED+L+ AV  + P
Sbjct: 179 AFKYLIANKGIATEDTYPYTATDGVCVYNKTMAAGRISSFKDVKHGSEDQLKLAVAQIGP 238

Query: 229 VSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED--GVPYWLIKNSWGE 285
           +SVA +   G F+FYK GVY   +C +  +D  H V+AVGYG +   G+ YWL+KNSW  
Sbjct: 239 ISVAIDASSGDFQFYKKGVYVDEECSSKYLD--HGVLAVGYGTDKGTGLDYWLVKNSWSA 296

Query: 286 NWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           +WGD GY KM    KNMCGIA+ ASYPV+
Sbjct: 297 SWGDQGYIKMARNHKNMCGIASLASYPVI 325


>gi|535600|gb|AAA29137.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/216 (49%), Positives = 142/216 (65%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG++E  Y +     IS SEQQLVDC+  F N G
Sbjct: 112 IDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNEKTSISFSEQQLVDCSGPFGNYG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDEL 219
           CNGGL   A+EY+K   GL+TE +YPY   +G C++ +E +GV +V     +  G E EL
Sbjct: 172 CNGGLMENAYEYLK-RFGLETESSYPYRAVEGQCRY-NEQLGVAKVTGYYTVHSGDEVEL 229

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           Q+ VG  RP +VA +V   F  Y+SG+Y S  C  +P  +NH V+AVGYG++DG  YW++
Sbjct: 230 QNLVGCRRPAAVALDVESDFMMYRSGIYQSQTC--SPDRLNHGVLAVGYGIQDGTDYWIV 287

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           KNSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 288 KNSWGTWWGEDGYIRMVRKRGNMCGIASLASVPMVA 323


>gi|410519429|gb|AFV73398.1| cathepsin L [Haliotis discus hannai]
          Length = 326

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/215 (49%), Positives = 131/215 (60%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW FS+TGSLE    + + K ISLSEQ LVDC+    N G
Sbjct: 114 VDWRTKGYVTEVKNQGQCGSCWAFSSTGSLEGQTFKKYNKLISLSEQNLVDCSTEQGNMG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL  QAF YIK N G+DTE +YPY    G C+F+  NVG       +I   +E +LQ
Sbjct: 174 CGGGLMDQAFTYIKVNDGIDTETSYPYEAASGKCRFNKANVGANDTGYTDIKSKSESDLQ 233

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P++VA +     F+ YKSGVY    C  T +D  H V+AVGYG + G  YWL+
Sbjct: 234 SAVATVGPIAVAIDASHMSFQLYKSGVYHYIFCSQTRLD--HGVLAVGYGTDSGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG  WG  GY  M   + N CGIAT ASYP V
Sbjct: 292 KNSWGATWGQQGYIMMSRNRDNNCGIATQASYPTV 326


>gi|110625773|ref|NP_081620.2| cathepsin L-like 3 precursor [Mus musculus]
 gi|74208432|dbj|BAE26401.1| unnamed protein product [Mus musculus]
 gi|187955662|gb|AAI47425.1| RIKEN cDNA 2310051M13 gene [Mus musculus]
 gi|187957686|gb|AAI47424.1| RIKEN cDNA 2310051M13 gene [Mus musculus]
          Length = 331

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 112/242 (46%), Positives = 149/242 (61%), Gaps = 13/242 (5%)

Query: 77  EEMKLRFATFSKNL--DLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAY 134
           ++ K+    F + L  D+ +S + +   Y     ++PVKDQG CGSCW FS  GSLE   
Sbjct: 98  QKTKMMMKVFQEPLLGDVPKSVDWRDHGY-----VTPVKDQGSCGSCWAFSAVGSLEGQM 152

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
            +  GK + LS Q LVDC+ +  NQGC+GGLP  AF+Y+K NGGLDT  +YPY   +G C
Sbjct: 153 FRKTGKLVPLSVQNLVDCSWSQGNQGCDGGLPDLAFQYVKDNGGLDTSVSYPYEALNGTC 212

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCG 253
           +++ +N    V   VN+   +ED L  AV  V P+SV  +     F+FYK G+Y    C 
Sbjct: 213 RYNPKNSAATVTGFVNVQ-SSEDALMKAVATVGPISVGIDTKHKSFQFYKEGMYYEPDCS 271

Query: 254 NTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           +T +D  HAV+ VGYG E DG  YWL+KNSWG +WG +GY KM   + N CGIA+ ASYP
Sbjct: 272 STVLD--HAVLVVGYGEESDGRKYWLVKNSWGRDWGMNGYIKMAKDRNNNCGIASDASYP 329

Query: 312 VV 313
           VV
Sbjct: 330 VV 331


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/275 (41%), Positives = 159/275 (57%), Gaps = 9/275 (3%)

Query: 46  ETSVLQVIGQARHALSFARFARRYGKIYESVEE----MKLRFATFSKNLD-LIRSTNCKG 100
           + +VL   GQA + L    +A  Y + + +++     ++ +  + ++    L+  T    
Sbjct: 52  QHNVLADQGQANYRLGMNTYADLYNEEFMALKGSSGILQAKDQSSTQTFKPLVGVTLPSS 111

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW+FS TGSLE  +    G  +SLSEQQLVDC+ ++ N G
Sbjct: 112 VDWRNQGYVTPVKDQGQCGSCWSFSATGSLEGQHFAKTGTLVSLSEQQLVDCSWSYGNYG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A++YI+  GG+  E AYPYT ++G C F            V I  G E  L 
Sbjct: 172 CSGGLMESAYDYIRDAGGVQLESAYPYTAQNGRCHFDQSKAVATCTGHVAIPSGDEQSLM 231

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AVG V PV+VA +     F+ Y+SGVY  ++C ++ +D  H V+A GYG E G  YWL+
Sbjct: 232 QAVGTVGPVAVAIDASGYDFQLYESGVYDRSRCSSSSLD--HGVLAAGYGTEGGNDYWLV 289

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG  WG  GY KM   K N CGIAT A YP+V
Sbjct: 290 KNSWGPGWGAQGYIKMSRNKSNQCGIATMACYPLV 324


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 126 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   +G       +I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFTDIPQGDEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 246 MAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGDDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 138/218 (63%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  +++  G  +SLSEQ LVDC+  + N
Sbjct: 126 KQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+  ++G      V+I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGSIGATDRGFVDIPQGNEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  + PV+VA +   + F+FY  GVY+   C    +D  H V+ VG+G  E G  Y
Sbjct: 246 MAEAVATIGPVAVAIDASHESFQFYSEGVYNEPACDAQNLD--HGVLVVGFGTDESGEDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341


>gi|146152090|gb|ABQ08058.1| cathepsin L [Misgurnus mizolepis]
          Length = 337

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 111/220 (50%), Positives = 139/220 (63%), Gaps = 9/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSEQ LVDC++   N+G
Sbjct: 120 LDWREKGYVTPVKDQGECGSCWAFSTTGAMEGQMFRKQGKLVSLSEQNLVDCSRPEGNEG 179

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL  QAF+YIK N GLD+EEAYPY G D   C +  +         V+I  G E  L
Sbjct: 180 CNGGLMDQAFQYIKDNNGLDSEEAYPYLGTDDQPCHYDPKYNAANDTGFVDIPSGKEHAL 239

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGV 274
             AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H V+ VGYG E    DG 
Sbjct: 240 MKAVASVGPVSVAIDAGHESFQFYQSGIYFEKECSSEELD--HGVLVVGYGFEGEDVDGK 297

Query: 275 PYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            YW++KNSW E+WGD GY  M    KN CGIAT ASYP+V
Sbjct: 298 KYWIVKNSWSESWGDKGYIYMAKDRKNHCGIATAASYPLV 337


>gi|397499865|ref|XP_003820654.1| PREDICTED: cathepsin L2 isoform 1 [Pan paniscus]
 gi|397499867|ref|XP_003820655.1| PREDICTED: cathepsin L2 isoform 2 [Pan paniscus]
          Length = 334

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 109/230 (47%), Positives = 141/230 (61%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +T G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VVTPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+ +  KN CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKKNHCGIATAASYPNV 334


>gi|13774082|gb|AAK38169.1| cathepsin L-like [Fasciola hepatica]
          Length = 310

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 142/215 (66%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 96  IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNG 155

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL+
Sbjct: 156 CSGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTGYYTVHSGSEVELK 214

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG  RP ++A +V   F  Y+SG+Y S  C   P  +NHAV+AVGYG +DG  YW++K
Sbjct: 215 NLVGSRRPAAIAVDVESDFMMYRSGIYQSQTC--LPFALNHAVLAVGYGTQDGTDYWIVK 272

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 273 NSWGLSWGERGYIRMARNRGNMCGIASLASLPMVA 307


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 137/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  +++  G  +SLSEQ LVDC+  + N
Sbjct: 126 KQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQHYRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   +G      V+I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFVDIPQGNEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  + PV+VA +   + F+FY  GVY+   C    +D  H V+ VG+G  E G  Y
Sbjct: 246 MAEAVATIGPVAVAIDASHESFQFYSEGVYNEPACDAQNLD--HGVLVVGFGTDESGQDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 126 KSVDWRSKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   +G       +I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFTDIPQGDEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 246 MAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGDDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKDNQCGIASASSYPLV 341


>gi|389610697|dbj|BAM18960.1| cathepsin L [Papilio polytes]
          Length = 341

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/345 (37%), Positives = 191/345 (55%), Gaps = 49/345 (14%)

Query: 11  VILLLCCAAAASASASSFD----DSNPIRLVSSDGLRDFETSV-----LQVIGQARHALS 61
           +++L+C  AAASA  S FD    + N  ++   +  + +++ V     +++  + +H ++
Sbjct: 4   LVVLMCVVAAASA-VSFFDLVKEEWNAFKM---EHQKQYDSEVEDKFRMKIYAENKHKIA 59

Query: 62  F--ARFAR----------RYGKI--YESVEEMKLRFATFSKN-------------LDLIR 94
               +FAR          +YG +  +E V  M   F   +KN                I 
Sbjct: 60  KHNQKFARGQVPFRVKQNKYGDMLHHEFVHTMN-GFNKTTKNGKGLFGKSAGERGATFIP 118

Query: 95  STNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVD 151
             N +    + +R    ++ VKDQG CGSCW+FS TG+LE  +++     +SLSEQ L+D
Sbjct: 119 PANVRVPDHVDWRKHGAVTEVKDQGKCGSCWSFSATGALEGQHYRQTNILVSLSEQNLID 178

Query: 152 CAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNI 211
           C+ A+ N GCNGGL   AF+YIK N G+DTE++YPY   D  C+++  N G   +  ++I
Sbjct: 179 CSTAYGNNGCNGGLMDNAFKYIKDNKGIDTEKSYPYEAVDDKCRYNPRNSGADDVGFIDI 238

Query: 212 TLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV 270
             G E +L  AV  V PVSVA +   + F+FY  GVY    C +T +D  H V+ VGYG 
Sbjct: 239 PSGDEGKLMAAVATVGPVSVAIDASQETFQFYSDGVYFDENCSSTSLD--HGVLVVGYGT 296

Query: 271 -EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            E+G  YWL+KNSWG +WGD GY KM   + N CGIAT AS+P+V
Sbjct: 297 DENGGDYWLVKNSWGRSWGDLGYIKMARNRDNHCGIATAASFPLV 341


>gi|300120790|emb|CBK21032.2| unnamed protein product [Blastocystis hominis]
          Length = 516

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 155/303 (51%), Gaps = 49/303 (16%)

Query: 59  ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---------- 108
           A  F +F +   K Y  VE  K R   F +N   +   N +  SY+L LN          
Sbjct: 214 AAEFKQFVKDNKKCYNDVE-YKERQLNFLRNKARVEKVNSENRSYKLKLNHLADRSESEL 272

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVKDQ  CGSCWT+ T G LE
Sbjct: 273 RAMMGLKRSQKKDFAAHRYTPSNGVKPDFVDWREKGAVTPVKDQCMCGSCWTYGTVGVLE 332

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGK 190
             Y   +GK +  SEQ L+DC+  F N GCNGG   +A+ ++ +NGGL T+E Y  Y G 
Sbjct: 333 GQYFLKYGKLVKFSEQNLLDCSWNFGNDGCNGGEDFRAYGWMLHNGGLMTDEDYGHYLGI 392

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSST 250
           DG C F+     V++ D V IT G+ +EL+ AV  V P+SV   V   F FY  GV+ + 
Sbjct: 393 DGWCHFNKSAAAVKITDYVLITPGSVEELEDAVANVGPISVGIAVTTDFLFYAEGVFDNP 452

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           +C +   D  HAV+AVGYG E+G  YWLIKNSW   WGD+GY K+    N+CG+AT ASY
Sbjct: 453 ECSSAVEDQAHAVLAVGYGTENGKDYWLIKNSWSTYWGDNGYVKIARKNNICGVATAASY 512

Query: 311 PVV 313
           P++
Sbjct: 513 PIL 515


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 126 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   +G       +I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGAIGATDRGFTDIPQGDEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PV+VA +   + F+FY  GVY+  +C    +D  H V+ VGYG  E G  Y
Sbjct: 246 MAEAVATVGPVAVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGYGTDESGDDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKDNQCGIASASSYPLV 341


>gi|114625736|ref|XP_001153919.1| PREDICTED: cathepsin L2 isoform 2 [Pan troglodytes]
 gi|114625742|ref|XP_520130.2| PREDICTED: cathepsin L2 isoform 5 [Pan troglodytes]
          Length = 334

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 109/230 (47%), Positives = 140/230 (60%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +T G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VVTPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 126 KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 185

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   +G       +I  G E +
Sbjct: 186 NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFTDIPQGDEKK 245

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PV+VA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 246 MAEAVATVGPVAVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 303

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 304 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341


>gi|226821421|gb|ACO82386.1| cathepsin L-like protein [Lutjanus argentimaculatus]
          Length = 301

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 139/222 (62%), Gaps = 9/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++   N
Sbjct: 82  RAVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSRPEGN 141

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+YIK N GLD+E++YPY G D   C +  +         V+I  G E 
Sbjct: 142 EGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSANDTGFVDIPSGKER 201

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  AV  V PVSVA +   + F+FY+SG+Y    C +  +D  H V+ VGYG E    D
Sbjct: 202 ALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCSSEELD--HGVLVVGYGFEGEDVD 259

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  YW++KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 260 GKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 301


>gi|348545637|ref|XP_003460286.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 101/207 (48%), Positives = 134/207 (64%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQ  CGSCW FS TG+LE  + +  G  +SLSEQQLVDC+  F N GC GG    
Sbjct: 130 VTEVKDQKQCGSCWAFSATGALEGQHFRKTGTLVSLSEQQLVDCSSNFGNSGCMGGWMDF 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIKYN G+DTEE YPY  K+G+C++  +++G      + +    E  L+ AV  V P
Sbjct: 190 AFKYIKYNRGIDTEEFYPYEAKNGLCRYKRDSIGATCSGYIIVKRFEEQALKEAVATVGP 249

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +     F+ Y+SGVY    CG+  + +NHAV+AVGYG E+G  YWL+KNSWG  W
Sbjct: 250 ISVTIDASRPSFQLYESGVYYDDGCGS--IFLNHAVLAVGYGTENGHDYWLVKNSWGLGW 307

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           G+ GY +M    KN CGIA+ A YP+V
Sbjct: 308 GEKGYIRMSRNKKNQCGIASVARYPLV 334


>gi|50403821|gb|AAT76664.1| cathepsin L1 proteinase [Fasciola hepatica]
          Length = 326

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 103/215 (47%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG+ E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTGVKDQGNCGSCWAFSTTGTTEGQYMKNERTSISFSEQQLVDCSGPWGNNG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPYT  +G C+ S +    +V     +  G+E EL+
Sbjct: 172 CGGGLMENAYEYLK-QFGLETESSYPYTAVEGQCRHSKQLGVAKVTGYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG  RP +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAERPAAVAVDVESDFMMYRSGIYQSQTC--SPLSVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGLSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|320543907|ref|NP_001188921.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
 gi|318068589|gb|ADV37168.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
          Length = 249

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 34  KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 93

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 94  NGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKK 153

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 154 MAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 211

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 212 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 249


>gi|345320664|ref|XP_001521690.2| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 388

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/212 (50%), Positives = 138/212 (65%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QGHCGSCW FSTTG+LE    +  G+ +SLSEQ LVDC+    NQGCNGG+   
Sbjct: 179 VTPVKNQGHCGSCWAFSTTGALEGQLFRKSGRLVSLSEQNLVDCSWQQGNQGCNGGIVDF 238

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YI  N G+D+E+ YPYT KD   C F  E    +V   V+I   +E+ L  AV  V 
Sbjct: 239 AFQYILENRGIDSEDCYPYTAKDTAQCAFKPECATARVTGFVDIPPHSEEALMKAVATVG 298

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +     FRFY+SG++   KC +  +  NHAV+ VGYG E     G  YW++KNS
Sbjct: 299 PVSVAIDAHPTSFRFYQSGIFYEPKCSSERL--NHAVLVVGYGYEGEDEAGKKYWIVKNS 356

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ WGDHGYF +   + N CGIAT ASYP++
Sbjct: 357 WGKQWGDHGYFYLSKDRGNHCGIATTASYPLL 388


>gi|297684914|ref|XP_002820054.1| PREDICTED: cathepsin L2 isoform 2 [Pongo abelii]
          Length = 334

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/230 (47%), Positives = 137/230 (59%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC+    NQGCNGG   +AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSHPQGNQGCNGGFMDKAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            I  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VILPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    D   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPDV 334


>gi|41152538|gb|AAR99518.1| cathepsin L protein [Fasciola hepatica]
          Length = 326

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/271 (42%), Positives = 166/271 (61%), Gaps = 17/271 (6%)

Query: 57  RHALSFARFARRYGKIYE-SVEEMKLRFAT-FSKNLDLIR-----STNCKG----LSYRL 105
           RH L    +     +  + + EE K ++ T  S+  D++       TN +     + +R 
Sbjct: 57  RHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYETNNRAVPDKIDWRE 116

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GC+GGL
Sbjct: 117 SGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGL 176

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVG 224
              A++Y+K   GL+TE +YPYT  +G C++ +E +GV +V     +  G+E EL++ VG
Sbjct: 177 MENAYQYLK-QFGLETESSYPYTAVEGQCRY-NEQLGVAKVTGYYTVHSGSEVELKNLVG 234

Query: 225 LVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWG 284
              P +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++KNSWG
Sbjct: 235 SEGPAAVAVDVESDFMMYRSGIYQSQTC--SPLSVNHAVLAVGYGTQGGTDYWIVKNSWG 292

Query: 285 ENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
            +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 293 LSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|334332720|ref|XP_001367595.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 137/217 (63%), Gaps = 4/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TGSLE  +     K +SLSEQ LVDC+ +  N
Sbjct: 119 KSVDWREKGYVTPVKNQGQCGSCWAFSATGSLEGQWFHKTKKLVSLSEQNLVDCSTSEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL   AFEY+K NGG+DTE+AYPY G+D  CK+ +E  G  V   V+I    E  
Sbjct: 179 NGCSGGLMDNAFEYVKNNGGIDTEQAYPYLGQDNECKYRAECSGANVTGFVDIPSMNERA 238

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L  AV  V P+SVA +  +  F+FY+SGVY   +C ++ +D  H V+ VGYG      YW
Sbjct: 239 LMKAVANVGPISVAIDAGNPSFQFYESGVYYEPQCSSSQLD--HGVLVVGYGSIGKDEYW 296

Query: 278 LIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           ++KNSWGE WG  GY  M +   N CGIAT ASYP V
Sbjct: 297 IVKNSWGEEWGKKGYVLMAKFRNNHCGIATAASYPQV 333


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 170/312 (54%), Gaps = 51/312 (16%)

Query: 48  SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGL 107
           S  ++  Q ++  +F  +  ++ K Y + +E   R++ F  N+D++   N KG +  LGL
Sbjct: 18  SAARIFSQKQYQTAFQNWMVKHQKSYTN-DEFGSRYSVFQDNMDIVAKWNQKGSNTILGL 76

Query: 108 NI---------------------------------------------SPVKDQGHCGSCW 122
           N+                                             + VK+QG CG C+
Sbjct: 77  NVMADLTNEEFKKLYLGTKANVTYKKKTLVGVSGLPASVDWRANGAVTAVKNQGQCGGCY 136

Query: 123 TFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182
            FSTTGS+E  +     + + LSEQQ++DC+ +  N GC+GGL + +FEYI   GGLDTE
Sbjct: 137 AFSTTGSVEGIHEITSQQLVPLSEQQILDCSGSEGNNGCDGGLMTNSFEYIIAVGGLDTE 196

Query: 183 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRF 241
            +YPYTG+ G CKF+ +N+G  +    N+  G+E +LQ AV   +PVSVA +     F+ 
Sbjct: 197 ASYPYTGEVGKCKFNKKNIGATITGYKNVESGSESDLQTAVA-AQPVSVAIDASQSSFQL 255

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-N 300
           Y SGVY   +C +T +D  H V+AVGYG + G  YW++KNSWG +WG++G+  M   K N
Sbjct: 256 YASGVYYEPECSSTQLD--HGVLAVGYGSQSGQDYWIVKNSWGADWGENGFILMARNKDN 313

Query: 301 MCGIATCASYPV 312
            CGIAT AS+P 
Sbjct: 314 NCGIATMASFPT 325


>gi|297684916|ref|XP_002820055.1| PREDICTED: cathepsin L2 isoform 3 [Pongo abelii]
          Length = 345

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/230 (47%), Positives = 137/230 (59%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 123 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 177

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC+    NQGCNGG   +AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 178 VDCSHPQGNQGCNGGFMDKAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTGFT 237

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            I  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 238 VILPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 295

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    D   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 296 GFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPDV 345


>gi|405963298|gb|EKC28885.1| Cathepsin L [Crassostrea gigas]
          Length = 265

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 104/207 (50%), Positives = 131/207 (63%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FSTTG LE  +++  GK +SLSEQ L+DC++   N GCNGGLP +
Sbjct: 63  VTPVKNQGQCGSCWAFSTTGGLEGQHYRKTGKLVSLSEQNLLDCSK--ENMGCNGGLPQK 120

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A++YIK NGG+DTEE+YPY GK   C F    VG      V +T G E  L+ AV  V P
Sbjct: 121 AYKYIKENGGIDTEESYPYLGKKETCSFRPSEVGATCTGFVQVTAGDELALKKAVASVGP 180

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           ++V  +     F+ YK GVY    C   P+  +HAV+ VGYGV  G  YWL+KNSWG +W
Sbjct: 181 ITVCIDASQPSFQLYKGGVYDEQSC--NPIVFDHAVLIVGYGVYQGKDYWLVKNSWGTSW 238

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   + N CGIA  A YP V
Sbjct: 239 GMDGYIMMSRNQNNQCGIANHAVYPTV 265


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 135/215 (62%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FS TGSLE  +     + +SLSEQ+LVDC+  + N G
Sbjct: 102 VDWRTKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNNELVSLSEQELVDCSTEYGNDG 161

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+YIK NGG+DTE +YPY  +D  C+F + ++G      V +    E+ L 
Sbjct: 162 CGGGWMTSAFDYIKDNGGIDTESSYPYEAQDRSCRFDANSIGATCTGFVEVQH-TEEALH 220

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  + P+SVA +     F+FY SGVY   KC  +P +++H V+AVGYG E    YWL+
Sbjct: 221 EAVSDIGPISVAIDASHFSFQFYSSGVYYEKKC--SPTNLDHGVLAVGYGTESTEDYWLV 278

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG  WGD GY KM   + N CGIA+  SYP V
Sbjct: 279 KNSWGSGWGDAGYIKMSRNRDNNCGIASEPSYPTV 313


>gi|15826035|pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An
           Irreversible Vinyl Sulfone Inhibitor
 gi|15826036|pdb|1FH0|B Chain B, Crystal Structure Of Human Cathepsin V Complexed With An
           Irreversible Vinyl Sulfone Inhibitor
          Length = 221

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 136/221 (61%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   N
Sbjct: 3   KSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN   Q      +  G E  
Sbjct: 63  QGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPGKEKA 122

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    D 
Sbjct: 123 LMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSDN 180

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 181 SKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 221


>gi|159792912|gb|ABW98676.1| cathepsin L [Apostichopus japonicus]
          Length = 332

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/246 (45%), Positives = 147/246 (59%), Gaps = 11/246 (4%)

Query: 71  KIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSL 130
           K   S E   ++F +++K      S + +   Y     ++PVKDQG CGSCW FSTTGSL
Sbjct: 95  KFDASRERQGIKFLSYAK-FQAPDSVDWRDEGY-----VTPVKDQGQCGSCWAFSTTGSL 148

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  + ++ G   SLSEQ LVDC+ ++ N GC GGL   AF+YIK N G+DTE+ YPY  +
Sbjct: 149 EGQHFRSTGVLTSLSEQNLVDCSISYGNNGCEGGLMDYAFQYIKDNLGIDTEDKYPYEAE 208

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           D  C+FS +NVG      V++  G ED L+ A     P+SVA +   + F+ Y+SGVY  
Sbjct: 209 DDTCRFSPDNVGATDSGYVDVDSGDEDALKEACAANGPISVAIDASHESFQLYESGVYDE 268

Query: 250 TKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
             C +  +D  H V+ VGYG +  G  YW++KNSWG +WG  GY  M   K N CGIAT 
Sbjct: 269 ESCSSIELD--HGVLVVGYGTDSVGGDYWIVKNSWGLSWGQEGYIWMSRNKDNQCGIATS 326

Query: 308 ASYPVV 313
           ASYP V
Sbjct: 327 ASYPTV 332


>gi|403300987|ref|XP_003941193.1| PREDICTED: cathepsin L2 [Saimiri boliviensis boliviensis]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/230 (49%), Positives = 140/230 (60%), Gaps = 14/230 (6%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  + AF Y+K NGGLD+E +YPY  KDG+CK+  EN        V
Sbjct: 167 VDCSRPQGNQGCNGGFMNYAFRYVKENGGLDSEASYPYEAKDGICKYKPENSVANDTGFV 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            I    E EL  AV  V P+SVA +     F+FYKSG+Y   KC +  +D  H V+ VGY
Sbjct: 227 VIPT-HEKELMKAVATVGPISVAVDASHSSFQFYKSGIYFEKKCSSKNLD--HGVLVVGY 283

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E        YWLIKNSWG  WG +GY K+   + N CGIAT ASYPVV
Sbjct: 284 GFEGANSKDNKYWLIKNSWGPEWGLNGYIKIAKDQNNHCGIATAASYPVV 333


>gi|313221001|emb|CBY31833.1| unnamed protein product [Oikopleura dioica]
 gi|313229611|emb|CBY18426.1| unnamed protein product [Oikopleura dioica]
          Length = 362

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/228 (47%), Positives = 141/228 (61%), Gaps = 5/228 (2%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           +D   S   K + +R    ++ VKDQG CGSCW+FS TG+LE    Q FGK   LSEQ L
Sbjct: 128 VDADESKLDKSVDWREKGAVTEVKDQGQCGSCWSFSATGALEGQMAQVFGKLPDLSEQNL 187

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDS 208
           VDC++   NQGCNGGL   AF+Y+K   GLD E+ YPY G D   C++   +        
Sbjct: 188 VDCSRPEGNQGCNGGLMDAAFQYVKDQDGLDGEDWYPYEGVDNKECRYDKSHREADDTGF 247

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
             I  G E  L+HA+  V PVSVA +  +  F+FY+SGVY    C  +P +++H V+AVG
Sbjct: 248 KMIPEGNEKALKHALAKVGPVSVAIDASNPSFQFYQSGVYYEPNC--SPENLDHGVLAVG 305

Query: 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           YG EDG  Y+L+KNSW E WGD+GY KM   K N CGIA+ A YP+V+
Sbjct: 306 YGTEDGEHYYLVKNSWSEAWGDNGYIKMARNKENHCGIASYAVYPIVS 353


>gi|118119|sp|P13277.2|CYSP1_HOMAM RecName: Full=Digestive cysteine proteinase 1; Flags: Precursor
 gi|11051|emb|CAA45127.1| cysteine proteinase preproenzyme [Homarus americanus]
 gi|228243|prf||1801240A Cys protease 1
          Length = 322

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 159/306 (51%), Gaps = 55/306 (17%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------- 108
           S+  F  ++G+ Y  +EE + R   F  NL  I   N K     ++Y L +N        
Sbjct: 19  SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNE 78

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQG CGSCW FSTTG +
Sbjct: 79  KFNAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGI 138

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQ-AFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           E  +    G+ +SLSEQQLVDCA  ++ NQGCNGG   +A  Y++ NGG+DTE +YPY  
Sbjct: 139 EGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEA 198

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYS 248
           +D  C+F+S  +G      V I  G+E  L+ A   + P+SVA +     F+ Y +GVY 
Sbjct: 199 RDNTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYY 258

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
              C ++ +D  HAV+AVGYG E G  +WL+KNSW  +WG+ GY KM   + N CGIAT 
Sbjct: 259 EPSCSSSQLD--HAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARNRNNNCGIATD 316

Query: 308 ASYPVV 313
           A YP V
Sbjct: 317 ACYPTV 322


>gi|317135059|gb|ADV03094.1| cathepsin L [Hyriopsis cumingii]
 gi|372126672|gb|AEX88474.1| cathepsin L [Hyriopsis schlegelii]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/210 (49%), Positives = 132/210 (62%), Gaps = 10/210 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSC+ FS TG++E  + +  GK +SLSEQ +VDC+    N+GC GGL  +
Sbjct: 129 VTPVKNQGGCGSCYAFSATGAVEGQHFRKTGKLVSLSEQNIVDCSFKEGNKGCRGGLMDK 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           +F YIK N G+DTEEAYPY  +DG C+F    VG  V   V++    E  LQHAV  + P
Sbjct: 189 SFTYIKDNNGIDTEEAYPYEARDGPCRFRRSEVGATVRGYVDLPENDEIALQHAVTTIGP 248

Query: 229 VSVAFEVVDG----FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWG 284
           +SVA   +DG    FRFY  GV+ +  C  T   +NH V+ VGYG  DG+ YWL+KNSWG
Sbjct: 249 ISVA---IDGHHFNFRFYHHGVFDNPNCSKTK--INHGVLVVGYGTRDGLDYWLVKNSWG 303

Query: 285 ENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           E WG  GY  M     N C I   ASYP+V
Sbjct: 304 ERWGAEGYILMSRNNDNQCCITCAASYPIV 333


>gi|327263389|ref|XP_003216502.1| PREDICTED: cathepsin L1-like [Anolis carolinensis]
          Length = 339

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/223 (49%), Positives = 138/223 (61%), Gaps = 10/223 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTGSLE  + +  GK +SLSEQ LVDC++   N
Sbjct: 119 KSVDWREKGYVTPVKDQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSRPEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGCNGGL  QAFEYI  NGG+D+EE+YPY  KD   C + SE         V++  G E 
Sbjct: 179 QGCNGGLMDQAFEYIADNGGIDSEESYPYIAKDDEDCLYKSEFNAANDTGFVDVPEGHER 238

Query: 218 ELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----- 271
            L  AV  V PVSVA +     F+FY+SG+Y    C +  +D  H V+ VGYG E     
Sbjct: 239 ALMKAVAAVGPVSVAIDASHSTFQFYESGIYYDPDCSSEELD--HGVLVVGYGFEGTDDD 296

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +   YW++KNSW + WGD GY  M   + N CGIAT ASYP+V
Sbjct: 297 NKKKYWIVKNSWSDKWGDKGYILMAKDRNNHCGIATAASYPLV 339


>gi|8547325|gb|AAF76330.1|AF271385_1 cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG++E  Y +     IS SEQQLVDC++ F N G
Sbjct: 112 IDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSRDFGNYG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDEL 219
           CNGGL   A+EY+K   GL+TE +YPY   +G C++ +E +GV +V     +  G E EL
Sbjct: 172 CNGGLMENAYEYLK-RFGLETESSYPYRAVEGQCRY-NEQLGVAKVTGYYTVHSGDEVEL 229

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           Q+ VG   P +VA +V   F  Y+SG+Y S  C  +P  +NH V+AVGYG++DG  YW++
Sbjct: 230 QNLVGAEGPAAVALDVESDFMMYRSGIYQSQTC--SPDRLNHGVLAVGYGIQDGTDYWIV 287

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           KNSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 288 KNSWGTWWGEDGYIRMVRKRGNMCGIASLASVPMVA 323


>gi|342675481|gb|AEL31666.1| cathepsin L [Cynoglossus semilaevis]
          Length = 336

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/212 (50%), Positives = 136/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FSTTG+LZ    +  GK +SLSEQ LVDC++   N+GC GGL  Q
Sbjct: 127 VTPVKDQGQCGSCWAFSTTGALZGQNFRKMGKLVSLSEQNLVDCSRPEGNEGCGGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY G D   C +  +   V     V+I  G E  L  AV  V 
Sbjct: 187 AFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSVNDTGFVDIPSGKEHALMKAVASVG 246

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNS 282
           PVSVA +   + F+FY+SG+Y   +C +  +D  H V+AVGYG E    DG  YW++KNS
Sbjct: 247 PVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVLAVGYGFEGEDVDGKKYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           W E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 305 WSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 162/307 (52%), Gaps = 65/307 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG--------------------- 100
           F  F  ++ K+YES EE   RF+ FS+N+D I   N +                      
Sbjct: 30  FDAFKTKFNKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFADLTNEE 89

Query: 101 ------------------------------LSYRLGLNISPVKDQGHCGSCWTFSTTGSL 130
                                         + +R    ++P+K+QG CGSCW+FSTTGS+
Sbjct: 90  YRQLYLRPYPTELLGRERQEVWLDGPNAGSVDWRQKGAVTPIKNQGQCGSCWSFSTTGSV 149

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E A+  A G  +SLSEQQLVDC+ +F NQGCNGGL   AF+YI  NGGLDTE+ YPYT +
Sbjct: 150 EGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPYTAR 209

Query: 191 DGVCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYS 248
           DGVC  S E+   V +    ++    ED+L  AV    PVSVA E     F+ Y SGV+S
Sbjct: 210 DGVCDKSKESKHAVSISGYKDVPQNNEDQLAAAV-EKGPVSVAIEADQQSFQMYSSGVFS 268

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG---KNMCGIA 305
              CG    +++H V+ VGY  +    YW++KNSWG +WGD GY  M+ G     +CGIA
Sbjct: 269 G-PCG---TNLDHGVLVVGYTSD----YWIVKNSWGASWGDQGYIMMKRGVSSAGICGIA 320

Query: 306 TCASYPV 312
              SYP+
Sbjct: 321 MQPSYPI 327


>gi|377823949|gb|AFB77219.1| cathepsin L1 [Fasciola gigantica]
          Length = 326

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 141/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL+
Sbjct: 172 CMGGLMENAYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y+ G+Y S  C  +P+ VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFMMYRGGIYQSQTC--SPLGVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGSSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|14041143|emb|CAA71554.1| cathepsin [Geodia cydonium]
          Length = 322

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/215 (49%), Positives = 133/215 (61%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW FS TGSLE  +  A GK +SLSEQ LVDC+ A  N+G
Sbjct: 107 VDWRTKGYVTGVKNQGQCGSCWAFSATGSLEGQHFNATGKLVSLSEQNLVDCSSAEGNEG 166

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGLP  AF+Y+  NGG+DTE +YPY  +D  C +SS N+G      V+I   +E +LQ
Sbjct: 167 CNGGLPDDAFKYVIKNGGIDTEASYPYVARDEKCHYSSANIGSTCSSYVDIESKSEAQLQ 226

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            A   V P+ V  +    GF+ Y  GVY S  C  T +D  H V+ VGYGV     YW++
Sbjct: 227 VASATVGPIPVGIDASHLGFQLYDGGVYHSDLCSQTRLD--HGVLVVGYGVYKEKDYWMV 284

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG NWG  G   M   + N CGIAT ASYPVV
Sbjct: 285 KNSWGTNWGISGDMMMSRNRDNNCGIATMASYPVV 319


>gi|116488416|gb|AAB41670.2| secreted cathepsin L 1 [Fasciola hepatica]
          Length = 326

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 142/215 (66%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC++ + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL+
Sbjct: 172 CGGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGLSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|392881548|gb|AFM89606.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 143/221 (64%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTG+LE  + +  G+ +SLSEQ LV+C++   N
Sbjct: 119 KHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALEGQHFRRTGQLVSLSEQNLVECSKPEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K NGG+D+E++YPY G D   C ++ +         V+I  G E 
Sbjct: 179 EGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKER 238

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  A+  V PVSVA +     F+FY+SG+Y   +C +T  D++H V+ VGYGVE    D
Sbjct: 239 ALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECSST--DLDHGVLVVGYGVEKRDTD 296

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           G  YW++KNSW E WG +GY  M   K N CGIAT ASYP+
Sbjct: 297 GKKYWIVKNSWSEKWGQNGYILMAKDKDNHCGIATAASYPL 337


>gi|392884266|gb|AFM90965.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 143/221 (64%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTG+LE  + +  G+ +SLSEQ LV+C++   N
Sbjct: 119 KHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALEGQHFRRTGQLVSLSEQNLVECSKPEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K NGG+D+E++YPY G D   C ++ +         V+I  G E 
Sbjct: 179 EGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKER 238

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  A+  V PVSVA +     F+FY+SG+Y   +C +T  D++H V+ VGYGVE    D
Sbjct: 239 ALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECSST--DLDHGVLVVGYGVEKRDTD 296

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           G  YW++KNSW E WG +GY  M   K N CGIAT ASYP+
Sbjct: 297 GKKYWIVKNSWSEKWGQNGYILMAKDKDNHCGIATAASYPL 337


>gi|291383517|ref|XP_002708299.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 110/221 (49%), Positives = 135/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TG+LE    Q  GK ISLSEQ LVDC+    N
Sbjct: 116 KSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFQKTGKLISLSEQNLVDCSHPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+Y+K N GLD+EE+YPY G DG CK+  E         V+I  G E  
Sbjct: 176 QGCNGGLMDYAFQYVKDNSGLDSEESYPYEGMDGTCKYKPECSVANDTGFVDIP-GHEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+S A +     F+FYKSG+Y    C  +  D++H ++ VGYG E    + 
Sbjct: 235 LLRAVATVGPISAAIDAGHMSFQFYKSGIYYDPDC--SSKDLDHGILVVGYGFEGTNSNA 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WGD GY K+   K N CGIAT ASYP V
Sbjct: 293 TKYWLVKNSWGTTWGDEGYVKIIRDKDNHCGIATAASYPTV 333


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/296 (38%), Positives = 176/296 (59%), Gaps = 25/296 (8%)

Query: 34  IRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLI 93
            ++ +++ +R  + +V  + GQ  + +    F+ +      + EE+K R   F  +L+  
Sbjct: 87  FKIFANNFVRISKHNVRFIQGQVSYTMGINEFSDK------TDEELK-RLRCFRGSLNAS 139

Query: 94  R---------STNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
           R         +     + +R    ++PVK+QG+CGSCW FS TG++E     A G  +SL
Sbjct: 140 RDGSKYITIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSL 199

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY-TGKDG----VCKFSSE 199
           SEQQLVDC+  + N  CNGGL   AF+Y+K + G+DTE +YPY +G+ G     C+F+ +
Sbjct: 200 SEQQLVDCSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGETGDANPTCRFNLK 259

Query: 200 NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMD 258
              V+V   +++  G   EL+ AVG   P+SVA    +  F  YKSGVYS  +C +   D
Sbjct: 260 EAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSD--D 317

Query: 259 VNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK-MEMGKNMCGIATCASYPVV 313
           ++H V+ VGYG E+G+PYWLIKNSWG +WG++GY K +    N+CG+A+ ASYP++
Sbjct: 318 LDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYPLI 373


>gi|66378053|gb|AAY45871.1| cathepsin L-like cysteine proteinase [Longidorus elongatus]
          Length = 358

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/208 (50%), Positives = 136/208 (65%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FS TGSLE  +++  GK +SLSEQ LVDC    +++GCNGG    
Sbjct: 151 VTKVKDQGSCGSCWAFSATGSLEGQHYKQTGKLVSLSEQNLVDCDVNGDDEGCNGGYMDG 210

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y++ N G+DTE +YPY G+DG C+F SE+VG      V+I  G E  L+ A+  V P
Sbjct: 211 AFQYVETNKGIDTEASYPYKGRDGRCRFKSEDVGATDTGFVDIPEGNETLLEAAIATVGP 270

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGEN 286
           VSVA +     F+FY  GVY    C  +P  ++H V+AVGY   +DG  Y+++KNSW E+
Sbjct: 271 VSVAIDAASFKFQFYSHGVYYDRSC--SPEYLDHGVLAVGYNSTKDGKQYYIVKNSWSED 328

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WGD GY  M   K N CGIAT ASYP V
Sbjct: 329 WGDDGYILMSRRKNNNCGIATMASYPFV 356


>gi|530734|emb|CAA56914.1| cathepsin l [Nephrops norvegicus]
 gi|1582620|prf||2119193A cathepsin L-related Cys protease
          Length = 324

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/308 (38%), Positives = 158/308 (51%), Gaps = 57/308 (18%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------- 108
           S+  F  ++G+ Y  +EE + R   F  NL  I   N K     ++Y L +N        
Sbjct: 19  SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYESGEVTYNLAINQFSDLTND 78

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++ VKDQG CGSCW FS TG
Sbjct: 79  EFNSMMKGYKTSLRPKPVAVFTSTDAAPETTEVDWRTKGCVTHVKDQGQCGSCWAFSATG 138

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQA-FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           SLE  +   +G+ +SL+EQQLVDCA   + NQGCNGG  +QAF+YIK NGG+DTE +YPY
Sbjct: 139 SLEGQHFLKYGELVSLAEQQLVDCAGGIYYNQGCNGGWVNQAFKYIKANGGIDTESSYPY 198

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGV 246
             +D  C+F+S +V       V+I  G+E           P+SVA +     F+ Y SGV
Sbjct: 199 EARDNTCRFNSNSVAATCSGFVSIAQGSESPEVRRTTNTGPISVAIDAAHRSFQSYSSGV 258

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIA 305
           Y    C ++ +D  HAV+AVGYG E G  +WL+KNSWG +WG  GY  M   + N CGIA
Sbjct: 259 YYEPSCSSSQLD--HAVLAVGYGSEGGQDFWLVKNSWGTSWGSAGYINMARNRNNNCGIA 316

Query: 306 TCASYPVV 313
           T ASYP V
Sbjct: 317 TDASYPTV 324


>gi|387914010|gb|AFK10614.1| cathepsin L [Callorhinchus milii]
 gi|392873762|gb|AFM85713.1| cathepsin L [Callorhinchus milii]
 gi|392877488|gb|AFM87576.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 143/221 (64%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTG+LE  + +  G+ +SLSEQ LV+C++   N
Sbjct: 119 KHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALEGQHFRRTGQLVSLSEQNLVECSKPEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K NGG+D+E++YPY G D   C ++ +         V+I  G E 
Sbjct: 179 EGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKER 238

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  A+  V PVSVA +     F+FY+SG+Y   +C +T  D++H V+ VGYGVE    D
Sbjct: 239 ALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECSST--DLDHGVLVVGYGVEKRDTD 296

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           G  YW++KNSW E WG +GY  M   K N CGIAT ASYP+
Sbjct: 297 GKKYWIVKNSWSEKWGQNGYILMAKDKDNHCGIATAASYPL 337


>gi|1093503|prf||2104214A Cys protease
          Length = 255

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 40  KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 99

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 100 NGCNGGLMDNAFPYIKDNGGIDTEKSYPYEAIDDSCHFNRAQVGATDRGFTDIPQGDEKK 159

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +  AV  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 160 MPEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 217

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 218 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 255


>gi|310975575|gb|ADP55136.1| truncated cathepsin L-like protein [Miichthys miiuy]
          Length = 246

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/222 (48%), Positives = 138/222 (62%), Gaps = 9/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++   N
Sbjct: 27  RAVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSRPEGN 86

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K N GLD+E+AYPY G  D  C +            +++  G E 
Sbjct: 87  EGCNGGLMDQAFQYVKDNQGLDSEDAYPYLGTGDQPCHYDPNYNSANDTGFIDVPSGKEH 146

Query: 218 ELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  AV  V PVSVA +   + F+FY+SG+Y    C +  +D  H V+ VGYG E    D
Sbjct: 147 ALMKAVAAVGPVSVAIDASHESFQFYQSGIYYEKDCSSEELD--HGVLVVGYGFEGEDVD 204

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  YW++KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 205 GKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 246


>gi|294883322|ref|XP_002770704.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239873993|gb|EER02713.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 333

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 157/314 (50%), Gaps = 70/314 (22%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L+F  F  ++GK YES EE   R A F  NL  I   N K LSY+LG+N           
Sbjct: 26  LAFMGFQHKFGKNYESKEEEVKRNAIFQANLHHIEQVNAKDLSYKLGVNEHADLTHEEFA 85

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVKDQG CGSCW FSTTG+LE
Sbjct: 86  ALKLGTLKMSTRRDDKFVIEADTTQLPTSVDWRNKNVLTPVKDQGSCGSCWAFSTTGALE 145

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           A Y  A GK +SLSEQQLVDC+  + N GC GGL   A+EYIK + GLD E  Y Y G D
Sbjct: 146 AQYAIATGKLLSLSEQQLVDCSSGYGNNGCEGGLMDDAYEYIK-SAGLDQESTYSYNGTD 204

Query: 192 GVCKFS----------SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFR 240
            VC+ S           E  G  +LD        E  L  A+    PVSVA    D  FR
Sbjct: 205 DVCQGSLAKRSDGIPAGEVTGFHMLDKT------EQSLMKALADA-PVSVAMYAADPDFR 257

Query: 241 FYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN 300
           FYKSGVYSS  C N  +D  H VVAVGYG E+G  Y++I+NSWG +WG  GYF ++ G +
Sbjct: 258 FYKSGVYSSATC-NGKLD--HGVVAVGYGTENGSDYFIIRNSWGSSWGQAGYFYLKRGVS 314

Query: 301 MCGIATCASYPVVA 314
             G      Y  VA
Sbjct: 315 GYGECNILEYMCVA 328


>gi|3087790|emb|CAA75029.1| cathepsin L2 [Homo sapiens]
          Length = 334

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/230 (46%), Positives = 139/230 (60%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334


>gi|197258082|gb|ACH56225.1| cathepsin L-like cysteine proteinase [Bursaphelenchus xylophilus]
          Length = 282

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/252 (44%), Positives = 148/252 (58%), Gaps = 13/252 (5%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTF 124
           F R +G    S    K R      N ++  + + +   Y     ++PVK+QG CGSCW F
Sbjct: 41  FRRTFGDNIASRNATKWRAPL---NFEVPDAVDWRDEGY-----VTPVKNQGMCGSCWAF 92

Query: 125 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184
           S TGSLE  + +A GK +SLSEQ LVDC+  F N GCNGGL   AFEY+K N G+DTEE+
Sbjct: 93  SATGSLEGQHKRATGKLVSLSEQNLVDCSADFGNNGCNGGLMDFAFEYVKQNHGIDTEES 152

Query: 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYK 243
           YPY  K   C F   NVG      V++    E++L+ AV    PVSVA +     FR YK
Sbjct: 153 YPYKAKQKKCHFQKANVGADDTGFVDLPEADEEQLKAAVASQGPVSVAIDAGHRSFRLYK 212

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NM 301
           +GVY    C  +P  ++H V+ VGYG + +   YW++KNSWGE WG+ GY ++   + N 
Sbjct: 213 TGVYYEKHC--SPEQLDHGVLVVGYGTDPEHGDYWIVKNSWGEEWGEKGYVRIARNRNNH 270

Query: 302 CGIATCASYPVV 313
           CGIA+ ASYP+ 
Sbjct: 271 CGIASKASYPLA 282


>gi|443698586|gb|ELT98517.1| hypothetical protein CAPTEDRAFT_128252 [Capitella teleta]
          Length = 324

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 171/328 (52%), Gaps = 31/328 (9%)

Query: 13  LLLCCAAAASASASSFDD-------------SNPIRLVSSDGLRDFETSVLQVIGQ---- 55
           +L CC AA  AS   FD+             S      + D  R      L +I Q    
Sbjct: 1   MLACCIAATLASPLVFDEALDEMWTLFKTTHSKTYATEAEDMRRFIWERHLNMINQHNIE 60

Query: 56  ---ARHALSFARFARRYGKI--YESVEEMKLRFATFSKNLDLIRSTNC---KGLSYRLGL 107
               +H  S       YG +  +E       + A  S     +   N    K + +R   
Sbjct: 61  ADLGKHTFSLG--MNEYGDLTQHEYAAMSGYKMAKSSVGSSFLEPENLQVPKTVDWREKG 118

Query: 108 NISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPS 167
            ++PVK+QG CGSCW FS+TGSLE    +  G+  S+SEQ LVDC++   N GC+GGL  
Sbjct: 119 YVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISEQNLVDCSRDEGNMGCSGGLMD 178

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
            AF YIK N G+D+E++YPY   DG C++   +        V+I  G E  L+ AV  V 
Sbjct: 179 NAFTYIKKNMGIDSEKSYPYEAVDGECRYKKSDSVTTDSGFVDIPHGDETALRTAVASVG 238

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           PVSVA +     F+FYK+GVY+   C +T +D  H V+ VGYGVE+G  YWL+KNSWG +
Sbjct: 239 PVSVAIDASHTSFQFYKTGVYTEANCSSTQLD--HGVLVVGYGVENGQDYWLVKNSWGAS 296

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY K+     N CGIA+ ASYP++
Sbjct: 297 WGEAGYIKLARNHGNQCGIASQASYPLL 324


>gi|426362423|ref|XP_004048364.1| PREDICTED: cathepsin L2 isoform 1 [Gorilla gorilla gorilla]
 gi|426362425|ref|XP_004048365.1| PREDICTED: cathepsin L2 isoform 2 [Gorilla gorilla gorilla]
          Length = 334

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/230 (46%), Positives = 139/230 (60%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VVAPGKEKALMKAVATVGPISVAVDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334


>gi|23110960|ref|NP_001324.2| cathepsin L2 preproprotein [Homo sapiens]
 gi|320118898|ref|NP_001188504.1| cathepsin L2 preproprotein [Homo sapiens]
 gi|12644075|sp|O60911.2|CATL2_HUMAN RecName: Full=Cathepsin L2; AltName: Full=Cathepsin U; AltName:
           Full=Cathepsin V; Flags: Precursor
 gi|3107915|dbj|BAA25909.1| cathepsin V [Homo sapiens]
 gi|3228672|gb|AAC23598.1| cathepsin U [Homo sapiens]
 gi|3869129|dbj|BAA34365.1| cathepsin L2 [Homo sapiens]
 gi|23958123|gb|AAH23504.1| CTSL2 protein [Homo sapiens]
 gi|37182404|gb|AAQ89004.1| cathepsin L2 [Homo sapiens]
 gi|83405150|gb|AAI10513.1| Cathepsin L2 [Homo sapiens]
 gi|119579235|gb|EAW58831.1| cathepsin L2, isoform CRA_a [Homo sapiens]
 gi|119579236|gb|EAW58832.1| cathepsin L2, isoform CRA_a [Homo sapiens]
          Length = 334

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/230 (46%), Positives = 139/230 (60%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334


>gi|330803820|ref|XP_003289900.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
 gi|325080011|gb|EGC33585.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
          Length = 328

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 165/314 (52%), Gaps = 53/314 (16%)

Query: 48  SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGL 107
           S  +V  Q ++  +F  +  ++ K Y + +E   R+  F  N+D +   N KG    LGL
Sbjct: 18  SAARVFSQKQYQTAFQNWMVKHQKSYTN-DEFGSRYTIFQDNMDFVTKWNQKGSDTILGL 76

Query: 108 N-----------------------------------------------ISPVKDQGHCGS 120
           N                                               ++ VK+QG CG 
Sbjct: 77  NSMADLTNQEYQRIYLGTKTTVKKPNLIIGVTDVSKAPASVDWRANGAVTAVKNQGQCGG 136

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLD 180
           C++FSTTGS+E  +     + +SLSEQQ++DC+ +  N GC+GGL + +FEYI   GGLD
Sbjct: 137 CYSFSTTGSVEGIHEITSKQLVSLSEQQILDCSGSEGNNGCDGGLMTNSFEYIIAVGGLD 196

Query: 181 TEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGF 239
           TE +YPY G  G CKF+  N+G  +    N+  G+E +LQ AV   +PVSVA +   + F
Sbjct: 197 TEASYPYEGVVGKCKFNKANIGATITGYKNVKSGSESDLQTAVA-AQPVSVAIDASQNSF 255

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK 299
           + Y SGVY    C +T +D  H V+AVGYG + G  YW++KNSWG +WG+ G+  M   K
Sbjct: 256 QLYSSGVYYEPACSSTQLD--HGVLAVGYGSQSGQDYWIVKNSWGADWGEKGFILMARNK 313

Query: 300 -NMCGIATCASYPV 312
            N CGIAT ASYP 
Sbjct: 314 HNNCGIATMASYPT 327


>gi|157644745|gb|ABV59078.1| cathepsin L [Lates calcarifer]
          Length = 337

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/222 (48%), Positives = 137/222 (61%), Gaps = 9/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + L +R    ++PVKDQG CGSCW FSTTG+LE    +  GK +SLSEQ LVDC++   N
Sbjct: 118 RALDWRDKGYVTPVKDQGQCGSCWAFSTTGALEGQQFRKTGKLVSLSEQNLVDCSRPEGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K N GLD+E++YPY G D   C +            V++  G E 
Sbjct: 178 EGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPNYNSANDTGFVDVPSGKER 237

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  AV  V PVSVA +   + F+FY+SG+Y    C +  +D  H V+ VGYG E    D
Sbjct: 238 ALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCSSEELD--HGVLVVGYGYEGEDVD 295

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  YW++KNSW E WGD GY  M    KN CGIAT ASYP+V
Sbjct: 296 GKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 337


>gi|440793751|gb|ELR14926.1| Cysteine proteinase 5, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 326

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 103/213 (48%), Positives = 136/213 (63%), Gaps = 5/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
             +R    ++ VK+QG CGSCW+FSTTGS E A     G+  SLSEQ LVDC+ ++ N G
Sbjct: 115 FDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKHGRLTSLSEQNLVDCSTSYGNHG 174

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AFEYI  N G+DTEE+YPY    G C+++ ++ G +++   N+  G E  L 
Sbjct: 175 CNGGLMDYAFEYIIRNKGIDTEESYPYHASQGTCRYNKQHSGGELVSYTNVPSGNEGALL 234

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           +AV   +P SVA +     F+FYK GVY    C ++ +D  H V+AVG+GV DG  YWL+
Sbjct: 235 NAVA-TQPTSVAIDASHSSFQFYKGGVYDEPACSSSRLD--HGVLAVGWGVRDGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWG +WG  GY +M   K N CGIAT AS+P
Sbjct: 292 KNSWGADWGLSGYIEMSRNKHNQCGIATAASHP 324


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 110/230 (47%), Positives = 140/230 (60%), Gaps = 11/230 (4%)

Query: 87  SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSE 146
           S N+D +  T    + +R    ++PVKDQG CGSCW FS TGSLE    +  GK +SLSE
Sbjct: 112 SNNVDKLPKT----VDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSE 167

Query: 147 QQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVL 206
           Q LVDC+  + N GC+GG   +AF+YI   GG+DTE  Y Y   DG C F   NVG  V 
Sbjct: 168 QNLVDCS--YRNYGCHGGFMDRAFQYIIDAGGIDTEATYSYRAVDGNCHFKKANVGATVT 225

Query: 207 DSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVA 265
              ++T G+E  LQ AV  + P+SVA +     F+FYKSGVY+   C  T +   HAV+ 
Sbjct: 226 GYTDVTSGSEKALQKAVAHIGPISVAIDASHKFFKFYKSGVYNEPGCSTTRL--GHAVLV 283

Query: 266 VGYG-VEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           VGYG   DG  YW++KNSW + WG +GY  M   K N CGIA+ ASYP+V
Sbjct: 284 VGYGTTSDGTDYWIVKNSWAKTWGMNGYLWMSRNKDNQCGIASEASYPMV 333


>gi|318037269|ref|NP_001187182.1| cathepsin L precursor [Ictalurus punctatus]
 gi|196475596|gb|ACG76367.1| cathepsin L [Ictalurus punctatus]
          Length = 336

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 137/220 (62%), Gaps = 9/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++PVKDQG CGSCW FSTTG++E    +  GK +SLSEQ LVDC++   N+G
Sbjct: 119 LDWREKGYVTPVKDQGQCGSCWAFSTTGAMEGQQFRKTGKLVSLSEQNLVDCSRPEGNEG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL  QAF+YIK NGGLDTE+ YPY G D   C +            V+I  G E  L
Sbjct: 179 CNGGLMDQAFQYIKDNGGLDTEKFYPYLGTDDQPCHYDPSYSAANDTGFVDIPSGKEHAL 238

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGV 274
             AV  V PVSVA +   + F+FY+SG+Y    C +   D++H V+ VGYG E    DG 
Sbjct: 239 MKAVTAVGPVSVAIDAGHESFQFYQSGIYYEADCSSE--DLDHGVLVVGYGYEGENVDGK 296

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YW++KNSW E WG+ GY  M   + N CGIAT ASYP+V
Sbjct: 297 KYWIVKNSWSEQWGNKGYIYMAKDRHNHCGIATAASYPLV 336


>gi|31558997|gb|AAP49831.1| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/268 (40%), Positives = 161/268 (60%), Gaps = 15/268 (5%)

Query: 57  RHALSFARFARRYGKIYE-SVEEMKLRFAT-FSKNLDLIR-----STNCKG----LSYRL 105
           RH L    +     +  + + EE K ++ T  S+  D++       TN +     + +R 
Sbjct: 57  RHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYETNNRAVPDKIDWRE 116

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GC+GGL
Sbjct: 117 SGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGL 176

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
              A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL++ VG 
Sbjct: 177 MENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVPSGSEVELKNLVGA 235

Query: 226 VRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
             P +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++KNSWG 
Sbjct: 236 EGPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVKNSWGL 293

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPV 312
           +WG+ GY +M   + NMCGIA+ AS P+
Sbjct: 294 SWGERGYIRMARNRGNMCGIASLASLPI 321


>gi|21483190|gb|AAL14223.1| cathepsin L [Dictyocaulus viviparus]
          Length = 347

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 142 VTPVKNQGMCGSCWAFSATGALEGQHFRATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDL 201

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTEE YPY GK+  C F   ++G +    V++  G ED L+ AV    P
Sbjct: 202 AFEYIKDNHGIDTEEGYPYVGKEMRCHFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGP 261

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YW+IKNSWG  
Sbjct: 262 ISIAIDAGHRSFQLYKKGVYFDEECSSEELD--HGVLLVGYGTDPEAGDYWIIKNSWGTK 319

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 320 WGEKGYVRIARNRNNHCGVATKASYPLV 347


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 179/302 (59%), Gaps = 25/302 (8%)

Query: 34  IRLVSSDGLRDFETSVLQVIGQARHALSFARFARR------YGKIYESVEEMKLRFATFS 87
            ++ +++ +R  + +V  + GQ  + +    F+ +      +   +++ EE+K R   F 
Sbjct: 87  FKIFANNFVRISKHNVRFIQGQVSYTMGINEFSDKVIGLIIHTICFQTDEELK-RLRCFR 145

Query: 88  KNLD---------LIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
            +L+          I +     + +R    ++PVK+QG+CGSCW FS TG++E     A 
Sbjct: 146 GSLNASRDGSKYITIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLAT 205

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY-TGKDG----V 193
           G  +SLSEQQLVDC+  + N  CNGGL   AF+Y+K + G+DTE +YPY +G+ G     
Sbjct: 206 GNLVSLSEQQLVDCSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGETGDANPT 265

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKC 252
           C+F+ +   V+V   +++  G   EL+ AVG   P+SVA    +  F  YKSGVYS  +C
Sbjct: 266 CRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQC 325

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK-MEMGKNMCGIATCASYP 311
            +   D++H V+ VGYG E+G+PYWLIKNSWG +WG++GY K +    N+CG+A+ ASYP
Sbjct: 326 SSD--DLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMASYP 383

Query: 312 VV 313
           ++
Sbjct: 384 LM 385


>gi|21483188|gb|AAK77918.1| cathepsin L 1 [Dictyocaulus viviparus]
          Length = 347

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 142 VTPVKNQGMCGSCWAFSATGALEGQHFRATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDL 201

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTEE YPY GK+  C F   ++G +    V++  G ED L+ AV    P
Sbjct: 202 AFEYIKDNHGIDTEEGYPYVGKEMRCHFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGP 261

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YW+IKNSWG  
Sbjct: 262 ISIAIDAGHRSFQLYKKGVYFDEECSSEELD--HGVLLVGYGTDPEAGDYWIIKNSWGTK 319

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 320 WGEKGYVRIARNRNNHCGVATKASYPLV 347


>gi|163658591|gb|ABY28387.1| cathepsin L [Gnathostoma spinigerum]
          Length = 398

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 100/217 (46%), Positives = 141/217 (64%), Gaps = 6/217 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FS TG+LE  + +   + +SLSEQ LVDC++ + N G
Sbjct: 184 VDWRNSSYVTVVKDQGQCGSCWAFSATGALEGQHMRKTHQLVSLSEQNLVDCSRKYGNNG 243

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL   AFEYIK N G+DTEE+YPY G +G  C F  + VG +     ++  G E+ L
Sbjct: 244 CNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGKKCHFRRKFVGAEDYGYTDLPEGDEEAL 303

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYW 277
           + AV  + P+SVA +     F+ Y+ G+Y+  +C  +P D++H V+ VGYG ++    YW
Sbjct: 304 KVAVATIGPISVAIDAGHISFQNYRKGIYTENEC--SPEDLDHGVLVVGYGTDENAGDYW 361

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           ++KNSWG  WG+HGY +M   K N CGIA+ ASYP+V
Sbjct: 362 IVKNSWGTRWGEHGYIRMARNKRNQCGIASKASYPIV 398


>gi|20136379|gb|AAM11647.1|AF490984_1 cathepsin L, partial [Fasciola hepatica]
          Length = 311

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 141/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 97  IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNG 156

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL+
Sbjct: 157 CSGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELK 215

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG +DG  YW++K
Sbjct: 216 NLVGAEGPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQDGTDYWIVK 273

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG  WG+ GY +M   + NMCGIA+ AS  +VA
Sbjct: 274 NSWGSYWGERGYIRMARNRGNMCGIASLASVAMVA 308


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/262 (43%), Positives = 147/262 (56%), Gaps = 10/262 (3%)

Query: 60  LSFARFA----RRYGKIYESVE-EMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKD 114
           L   +FA      Y K Y  ++  +K       K L   + T    + +R    +S VKD
Sbjct: 75  LGLTKFADLTNEEYKKHYLGIKVNVKKNLNAAQKGLKFFKFTGPDSIDWREKGAVSQVKD 134

Query: 115 QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 174
           QG CGSCW+FSTTG++E A+    G  +SLSEQ LVDC+  + NQGC GGL   AFEYI 
Sbjct: 135 QGQCGSCWSFSTTGAVEGAHQIKSGNMVSLSEQNLVDCSGQYGNQGCEGGLMVNAFEYII 194

Query: 175 YNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 234
            NGG+ TE +YPYT   G CKF+    G  ++    I  G ED L  A+   +PVSVA +
Sbjct: 195 DNGGIATESSYPYTAAQGRCKFTKSMNGANIIGYKEIPQGEEDSLTAALA-KQPVSVAID 253

Query: 235 VVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGY- 292
                F+ Y SGVY    C +  +D  H V+AVGYG  +G  Y++IKNSWG  WG  GY 
Sbjct: 254 ASHMSFQLYSSGVYDEPACSSEALD--HGVLAVGYGTLEGKDYYIIKNSWGPTWGQDGYI 311

Query: 293 FKMEMGKNMCGIATCASYPVVA 314
           F     +N CG+AT ASYP+ A
Sbjct: 312 FMSRNAQNQCGVATMASYPISA 333


>gi|390457768|ref|XP_002742793.2| PREDICTED: cathepsin L2 [Callithrix jacchus]
          Length = 588

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 110/230 (47%), Positives = 139/230 (60%), Gaps = 14/230 (6%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           L+L +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LNLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC+    NQGCNGG  + AF+Y+K NGGLD+E +YPY  KDG CK+  EN        V
Sbjct: 167 VDCSHPQGNQGCNGGFMNNAFQYVKENGGLDSEASYPYVAKDGSCKYKPENSVANDTGFV 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            I    E EL  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VIP-AHEKELMKAVATVGPISVAVDASHSSFQFYKSGIYFEQDCSSKNLD--HGVLVVGY 283

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWLIKNSWG  WG +GY K+   + N CGIAT ASYP+V
Sbjct: 284 GFEGTNSNNNNYWLIKNSWGPEWGSNGYIKIAKDRNNHCGIATAASYPIV 333


>gi|348514005|ref|XP_003444531.1| PREDICTED: cathepsin L1-like [Oreochromis niloticus]
          Length = 338

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/296 (40%), Positives = 165/296 (55%), Gaps = 24/296 (8%)

Query: 35  RLVSSDGLRDFETSVL-QVIGQARHALSFARFA-------RRYGKIYESVEEMKLRFATF 86
           R+V    L+  E   L   +G+  + L    F        R+    Y+   E K++ + F
Sbjct: 50  RMVWEKNLKKIELHNLDHSMGKHTYRLGMNHFGDMTNEEFRQLMNGYKHKAERKVKGSLF 109

Query: 87  SKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
            +   L+  RS + +   Y     ++PVKDQG CGSCW FS TG+LE    +  GK + L
Sbjct: 110 LEPNFLEAPRSLDWRDKGY-----VTPVKDQGQCGSCWAFSATGALEGQQFRKTGKMVQL 164

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGV 203
           SEQ LV+C++   N+GCNGGL  QAF+Y+K N GLD+EE+YPY G D   C +      V
Sbjct: 165 SEQNLVECSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEESYPYLGTDDQKCHYDPRYNAV 224

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHA 262
                V+I  G+E  L  AV  V P+SVA +   + F+FY+SG+Y   +C +  +D  H 
Sbjct: 225 NDTGFVDIKSGSEHALMKAVTAVGPISVAIDAGHESFQFYQSGIYYEPECSSEELD--HG 282

Query: 263 VVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           V+ VGYG E    DG  YW++KNSW E WGD GY  M   + N CGIAT ASYP+V
Sbjct: 283 VLLVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYVYMAKDRQNHCGIATAASYPLV 338


>gi|390994425|gb|AFM37362.1| cathepsin L2 [Dictyocaulus viviparus]
          Length = 352

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 147 VTPVKNQGMCGSCWAFSATGALEGQHFRATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDL 206

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTEE YPY GK+  C F   ++G +    V++  G ED L+ AV    P
Sbjct: 207 AFEYIKDNHGIDTEEGYPYVGKEMRCHFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGP 266

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YW+IKNSWG  
Sbjct: 267 ISIAIDAGHRSFQLYKKGVYFDEECSSEELD--HGVLLVGYGTDPEAGDYWIIKNSWGTK 324

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 325 WGEKGYVRIARNRNNHCGVATKASYPLV 352


>gi|390347681|ref|XP_801784.2| PREDICTED: cathepsin L1-like isoform 2 [Strongylocentrotus
           purpuratus]
          Length = 336

 Score =  203 bits (517), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 108/245 (44%), Positives = 146/245 (59%), Gaps = 11/245 (4%)

Query: 73  YESVEEMKLRFATF--SKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSL 130
           Y+S    K++ +TF    N+ +  + + +   Y     ++PVK+QG CGSCW FSTTGSL
Sbjct: 99  YKSSNVTKVQGSTFLTPSNIQVPDTVDWRTKGY-----VTPVKNQGQCGSCWAFSTTGSL 153

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E    +   K +SLSEQ LVDC++   N GC GGL  Q F+Y+  N G+D+E+ YPY  +
Sbjct: 154 EGQTFKKTSKLVSLSEQNLVDCSRTEGNMGCEGGLMDQGFQYVIDNHGIDSEDCYPYDAE 213

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           D  C + +     +V    ++T G E  L  AV  V PVSVA +     F+ Y+SGVY  
Sbjct: 214 DETCHYKASCDSAEVTGFTDVTSGDEQALMEAVASVGPVSVAIDASHQSFQLYESGVYDE 273

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
            +C ++ +D  H V+ VGYG + G  YWL+KNSWGE WG  GY KM   K N CGIAT A
Sbjct: 274 PECSSSELD--HGVLVVGYGTDGGKDYWLVKNSWGETWGLSGYIKMSRNKSNQCGIATSA 331

Query: 309 SYPVV 313
           SYP+V
Sbjct: 332 SYPLV 336


>gi|30388235|gb|AAH51665.1| CDNA sequence BC051665 [Mus musculus]
          Length = 330

 Score =  203 bits (517), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 136/218 (62%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW FS  GSLE    +  GK + LSEQ L+DC+ ++ N
Sbjct: 116 KSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLEGQIFRKTGKLVPLSEQNLMDCSWSYGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+Y+K N GLDT E+Y Y   DG C++  +   V +   V + L +ED 
Sbjct: 176 VGCNGGLMELAFQYVKENRGLDTRESYAYEAWDGPCRYDPKYSAVNITGFVKVPL-SEDA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L +AV  V PVSV  +     FRFY+ G Y    C +T +D  HAV+ VGYG E DG  Y
Sbjct: 235 LMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCSSTNLD--HAVLVVGYGEESDGRKY 292

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE+WG  GY KM   + N CGIAT A YP V
Sbjct: 293 WLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIYPTV 330


>gi|269954686|ref|NP_954599.2| uncharacterized protein LOC218275 precursor [Mus musculus]
          Length = 330

 Score =  203 bits (517), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 136/218 (62%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW FS  GSLE    +  GK + LSEQ L+DC+ ++ N
Sbjct: 116 KSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLEGQIFRKTGKLVPLSEQNLMDCSWSYGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+Y+K N GLDT E+Y Y   DG C++  +   V +   V + L +ED 
Sbjct: 176 VGCNGGLMELAFQYVKENRGLDTRESYAYEAWDGPCRYDPKYSAVNITGFVKVPL-SEDA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L +AV  V PVSV  +     FRFY+ G Y    C +T +D  HAV+ VGYG E DG  Y
Sbjct: 235 LMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCSSTNLD--HAVLVVGYGEESDGRKY 292

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE+WG  GY KM   + N CGIAT A YP V
Sbjct: 293 WLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIYPTV 330


>gi|74211558|dbj|BAE26509.1| unnamed protein product [Mus musculus]
          Length = 338

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 136/218 (62%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW FS  GSLE    +  GK + LSEQ L+DC+ ++ N
Sbjct: 124 KSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLEGQIFRKTGKLVPLSEQNLMDCSWSYGN 183

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+Y+K N GLDT E+Y Y   DG C++  +   V +   V + L +ED 
Sbjct: 184 VGCNGGLMELAFQYVKENRGLDTRESYAYEAWDGPCRYDPKYSAVNITGFVKVPL-SEDA 242

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L +AV  V PVSV  +     FRFY+ G Y    C +T +D  HAV+ VGYG E DG  Y
Sbjct: 243 LMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCSSTNLD--HAVLVVGYGEESDGRKY 300

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE+WG  GY KM   + N CGIAT A YP V
Sbjct: 301 WLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIYPTV 338


>gi|28932708|gb|AAO60048.1| midgut cysteine proteinase 5 [Rhipicephalus appendiculatus]
          Length = 329

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 102/202 (50%), Positives = 125/202 (61%), Gaps = 4/202 (1%)

Query: 113 KDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEY 172
           +DQG CGSCW FS TGSLE  +    G+ +SLSEQ LVDC+Q+F N GC GGL   AF Y
Sbjct: 131 QDQGQCGSCWAFSATGSLEGQHLLKDGELVSLSEQNLVDCSQSFGNNGCEGGLMDNAFNY 190

Query: 173 IKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVA 232
           IK N G+DTEE YPY   DG C+F  E+VG      V+I  G ED+L+ A     P    
Sbjct: 191 IKANDGIDTEEGYPYEAVDGECRFKKEDVGATDTGFVDIPGGIEDDLKKA-SFCWPPPWL 249

Query: 233 FEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGY 292
           +     F+ Y  GVY  + C +  +D  H V+ VGYGV+ G  YWL+KNSW E+WGD GY
Sbjct: 250 WRSPSSFQLYSEGVYDESDCSSEQLD--HGVLVVGYGVKGGKKYWLVKNSWAESWGDQGY 307

Query: 293 FKMEMGK-NMCGIATCASYPVV 313
             M   K N CGIA+ ASYP+V
Sbjct: 308 ILMSRDKNNQCGIASAASYPLV 329


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/329 (37%), Positives = 168/329 (51%), Gaps = 66/329 (20%)

Query: 48  SVLQVIGQARHALS--------FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK 99
           +VL VIG A  ALS        +  F   + K YES  E  +R   F +N   I   N K
Sbjct: 60  AVLAVIGLAS-ALSPNPNLNQHWENFKAEHNKKYESFPEELMRRLIFEENHQFIEDHNSK 118

Query: 100 G-LSYRLGLN-------------------------------------------------- 108
               + LG+N                                                  
Sbjct: 119 KEFDFYLGMNHFGDLTNKEYRERYLGYRRPENTPSKASYIFSRAEKIEDVPDQIDWRDQG 178

Query: 109 -ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPS 167
            ++PVK+QG CGSCW FS  GSLE  + ++ GK +SLSEQ LVDC+    N GCNGG   
Sbjct: 179 FVTPVKNQGQCGSCWAFSAVGSLEGQHFKSTGKLVSLSEQNLVDCSTPEGNSGCNGGWMD 238

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           QAFEY+K N G+DTE++YPY G DG C F ++++G  +   +++  G E+ L+ AVG+  
Sbjct: 239 QAFEYVKDNHGIDTEDSYPYVGTDGSCHFKNKSIGATLKGFMDVKEGDEEALRQAVGVAG 298

Query: 228 PVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGE 285
           PVSVA +     F+FY+ GVY+   C  + +D  H V+ VGYG +  G  +W++KNSWG 
Sbjct: 299 PVSVAIDASSMLFQFYRGGVYNVPWCSTSELD--HGVLVVGYGKQFQGKDFWMVKNSWGV 356

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WG +GY +M   K N CGIA+ AS P V
Sbjct: 357 GWGIYGYIEMSRNKGNQCGIASKASIPTV 385


>gi|50657029|emb|CAH04632.1| cathepsin L [Suberites domuncula]
          Length = 324

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 99/207 (47%), Positives = 130/207 (62%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +S VK+QG CGSCW+FS TGSLE  +    G+ +SLSEQ L+DC+  F N GC GG+   
Sbjct: 120 VSEVKNQGQCGSCWSFSATGSLEGQHALKMGRLVSLSEQNLMDCSSRFGNHGCKGGIMDD 179

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF Y+  N G+DTE +YPYT KDG C+F+  NVG       +I  G+E  L  A   + P
Sbjct: 180 AFRYVISNHGVDTESSYPYTAKDGYCRFNQNNVGATETSYRDIARGSESSLTQASAQIGP 239

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FYK+GVY    C ++ +D  H V+ VGYG E G  Y+++KNSWG  W
Sbjct: 240 ISVAIDASHRSFQFYKNGVYYEPSCSSSRLD--HGVLVVGYGTEGGQDYFIVKNSWGTRW 297

Query: 288 GDHGYFKMEMG-KNMCGIATCASYPVV 313
           G  GY  M    +N CGIA+ ASYP+V
Sbjct: 298 GMDGYIMMSRNRRNNCGIASQASYPIV 324


>gi|391333246|ref|XP_003741030.1| PREDICTED: digestive cysteine proteinase 2-like [Metaseiulus
           occidentalis]
          Length = 327

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 107/273 (39%), Positives = 162/273 (59%), Gaps = 11/273 (4%)

Query: 48  SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFS-----KNLDLIRSTN-CKGL 101
           ++L  +GQ  + +  +RF     +   S+  + +  +T +      + D I  T   + +
Sbjct: 59  NLLHDLGQVSYRMGLSRFTDATPEEIRSLTCLNISDSTSTGKSNGNSFDTIDITELSEAV 118

Query: 102 SYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGC 161
            +R    ++PVKDQG CGSCW F+ TG++E  Y +  G+ +SLSEQ LVDC ++  + GC
Sbjct: 119 DWRQNGYVTPVKDQGKCGSCWAFAATGAVEGQYFKKTGQLVSLSEQNLVDCDRS--SDGC 176

Query: 162 NGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQH 221
            GG   ++FEYI+ NGG+ TE +Y Y    G C+F+++++G  V    ++  G E+ L  
Sbjct: 177 EGGYFYESFEYIRSNGGIATESSYGYEATAGSCRFTADSIGATVSGRDSVASGDEEALLK 236

Query: 222 AVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKN 281
           AV  + P+SV  +V+D FR Y SGVY   +C ++    NHAV+ VGYG E G  YWL+KN
Sbjct: 237 AVASIGPISVTIDVIDTFRHYSSGVYYDAECSSSSR--NHAVLVVGYGTEAGGDYWLVKN 294

Query: 282 SWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           SWG ++G+ GY KM   K N CGIA+ A YP+ 
Sbjct: 295 SWGTSFGEQGYIKMARNKGNNCGIASEAGYPIA 327


>gi|148709355|gb|EDL41301.1| cDNA sequence BC051665 [Mus musculus]
          Length = 349

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 108/218 (49%), Positives = 136/218 (62%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQGHCGSCW FS  GSLE    +  GK + LSEQ L+DC+ ++ N
Sbjct: 135 KSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLEGQIFRKTGKLVPLSEQNLMDCSWSYGN 194

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+Y+K N GLDT E+Y Y   DG C++  +   V +   V + L +ED 
Sbjct: 195 VGCNGGLMELAFQYVKENRGLDTRESYAYEAWDGPCRYDPKYSAVNITGFVKVPL-SEDA 253

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L +AV  V PVSV  +     FRFY+ G Y    C +T +D  HAV+ VGYG E DG  Y
Sbjct: 254 LMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCSSTNLD--HAVLVVGYGEESDGRKY 311

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE+WG  GY KM   + N CGIAT A YP V
Sbjct: 312 WLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIYPTV 349


>gi|11055|emb|CAA45129.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 320

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/215 (47%), Positives = 135/215 (62%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+  + N G
Sbjct: 109 VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDG 168

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+YIK NGG+DTE +YPY  +D  C+F + ++G     SV +    E+ LQ
Sbjct: 169 CGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQH-TEEALQ 227

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +     F+FY SGVY    C  +P  ++H V+AVGYG E    YWL+
Sbjct: 228 EAVSGVGPISVAIDASHFSFQFYSSGVYYEQNC--SPTFLDHGVLAVGYGTESTKDYWLV 285

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG +WGD GY KM   + N CGIA+  SYP V
Sbjct: 286 KNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 320


>gi|118125|sp|P25784.1|CYSP3_HOMAM RecName: Full=Digestive cysteine proteinase 3; Flags: Precursor
          Length = 321

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/215 (47%), Positives = 135/215 (62%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQ  CGSCW FS TG+LE  +     + +SLSEQQLVDC+  + N G
Sbjct: 110 VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDG 169

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+YIK NGG+DTE +YPY  +D  C+F + ++G     SV +    E+ LQ
Sbjct: 170 CGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQH-TEEALQ 228

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +     F+FY SGVY    C  +P  ++H V+AVGYG E    YWL+
Sbjct: 229 EAVSGVGPISVAIDASHFSFQFYSSGVYYEQNC--SPTFLDHGVLAVGYGTESTKDYWLV 286

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG +WGD GY KM   + N CGIA+  SYP V
Sbjct: 287 KNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321


>gi|281204396|gb|EFA78592.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 330

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 165/321 (51%), Gaps = 60/321 (18%)

Query: 48  SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGL 107
           S  ++  +  +   F  +  R  + Y+ V E + R+  F  NLDLI   N +G S  LG+
Sbjct: 15  SANRLFSEQHYQNQFTNWMVRLDRAYD-VFEFQDRYNAFKNNLDLIHKWNSQGHSTVLGV 73

Query: 108 N---------------------------------------------------ISPVKDQG 116
           N                                                   +  VKDQG
Sbjct: 74  NHLADLSNEEYRNLYLGVKVDASRLPQQAASIKLNKVFAPVAASLDWRSSGAVGRVKDQG 133

Query: 117 HCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYN 176
            CGSCW+FSTTGS+E A   A G   SLSEQQL+DC++ + N+GCNGGL   A +Y+   
Sbjct: 134 QCGSCWSFSTTGSIEGANQIATGNFASLSEQQLMDCSRDYGNEGCNGGLMDAAMKYVIAQ 193

Query: 177 GGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR-PVSVAFE 234
           GGLDTEE+YPYT  D   CKF+  N+G ++   +++  G+E +L  A  L + PVSVA +
Sbjct: 194 GGLDTEESYPYTMSDSYTCKFNPANIGAKISSYIDVQRGSETDL--AAKLNKGPVSVAID 251

Query: 235 VV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYF 293
                F+ YKSGVY    C +  +D  H V+AVGYG E    YW++KNSWG NWG  GY 
Sbjct: 252 ASHSSFQLYKSGVYYEPACSSYNLD--HGVLAVGYGTEGSSNYWIVKNSWGPNWGLSGYI 309

Query: 294 KMEMGK-NMCGIATCASYPVV 313
            M   K N CGI++ AS PVV
Sbjct: 310 WMAKDKSNHCGISSMASIPVV 330


>gi|15593252|gb|AAL02222.1|AF410882_1 cysteine protease CP14 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 137/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++P+KDQG CGSCW+FS TGSLE          +SLSEQ LVDC+  F N
Sbjct: 118 KKVDWRSKGAVTPIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AFEY+K NGG+DTEE+YPYT +DG C + + N         ++   +E  
Sbjct: 178 EGCNGGLMDSAFEYVKSNGGIDTEESYPYTAEDGTCLYKAANNAGVNTGYKDVQAKSESA 237

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L+ AV  V PVSVA +  +  F+ Y SG+Y    C +  +D  H V+AVGYG E     +
Sbjct: 238 LRDAVEKVGPVSVAIDASNWSFQMYTSGIYYEPACSSDSLD--HGVLAVGYGSEWPNKEF 295

Query: 277 WLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           W++KNSWG +WG+ GY KM    KN CGIAT ASYP+V
Sbjct: 296 WIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 333


>gi|293342579|ref|XP_001065885.2| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|293354415|ref|XP_225137.5| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|149039747|gb|EDL93863.1| rCG24278 [Rattus norvegicus]
          Length = 330

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 138/218 (63%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K L +R    ++PVK+QG CGSCW FS  GSLE    +  GK +SLSEQ LVDC+ ++ N
Sbjct: 116 KSLDWREHGYVTPVKNQGQCGSCWAFSAVGSLEGQIFKKTGKLVSLSEQNLVDCSWSYGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF+Y+K N GLDT E+Y Y  +DG+C+++ +     V   V + L +ED+
Sbjct: 176 LGCNGGLMEFAFQYVKENRGLDTGESYAYEAQDGLCRYNPKYSAANVTGFVKVPL-SEDD 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L  AV  V PVSV  +     FRFY  G+Y    C +T MD  HAV+ VGYG E DG  Y
Sbjct: 235 LMSAVASVGPVSVGIDSHHQSFRFYSGGMYYEPDCSSTEMD--HAVLVVGYGEESDGGKY 292

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE+WG  GY KM   + N CGIAT A YP V
Sbjct: 293 WLVKNSWGEDWGMDGYIKMAKDQNNNCGIATYAIYPTV 330


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/256 (46%), Positives = 150/256 (58%), Gaps = 12/256 (4%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           LSF  F  +Y   Y+ VE    R    S NL          + +R    ++P+KDQG CG
Sbjct: 93  LSFEEFKGKYFG-YKHVEREFAR----SNNLHQEVEAAPTSIDWRTSNAVTPIKDQGQCG 147

Query: 120 SCWTFSTTGSLEAAY-HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           SCW FS TGS+E A+  Q      SLSEQQLVDC+ ++ N GCNGGL   AFEYI  N G
Sbjct: 148 SCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIANKG 207

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD- 237
           +  E AYPY G  G+C+ S   V V +    ++  G E  L +AVG V PVSVA E    
Sbjct: 208 ICAESAYPYKGVGGLCQKSCTKV-VTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQA 266

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM 297
           GF+FY SGV+S T CG+   +++H V+AVGYG      YW++KNSWG +WG+ GY +M  
Sbjct: 267 GFQFYSSGVFSGT-CGH---NLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESGYIRMIR 322

Query: 298 GKNMCGIATCASYPVV 313
            KN CGIA   SYP V
Sbjct: 323 NKNQCGIAIQPSYPTV 338


>gi|261289787|ref|XP_002611755.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
 gi|229297127|gb|EEN67765.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
          Length = 327

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 132/216 (61%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+Q  CGSCW FSTTGSLE  +    G  +SLSEQ LVDC++   N+G
Sbjct: 114 VDWRQKGAVTKVKNQEQCGSCWAFSTTGSLEGQHFLKSGTLVSLSEQNLVDCSRKEGNKG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           C GGL  QAF+YIK NGG+DTEE YPY GK +  C++ S   G  +   V+I  G ED L
Sbjct: 174 CQGGLMDQAFKYIKTNGGIDTEECYPYKGKNERKCEYKSSCSGATLSSYVDIKTGDEDAL 233

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
             A   + P+SV  +     F+ Y  GVY   +C +  +D  H V+ VGYG +    YWL
Sbjct: 234 MQASATIGPISVGIDASHPSFQLYDHGVYHEKRCSSKKLD--HGVLVVGYGTDGEKDYWL 291

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWGE WG  GY KM   K N CGIAT ASYPVV
Sbjct: 292 VKNSWGEEWGMEGYIKMSRNKDNQCGIATQASYPVV 327


>gi|66812702|ref|XP_640530.1| counting factor associated protein [Dictyostelium discoideum AX4]
 gi|74897159|sp|Q54TR1.1|CFAD_DICDI RecName: Full=Counting factor associated protein D; Flags:
           Precursor
 gi|60468561|gb|EAL66564.1| counting factor associated protein [Dictyostelium discoideum AX4]
          Length = 531

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 158/303 (52%), Gaps = 52/303 (17%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  +  +Y K Y S +E   RF  F     +I + N K  SY+LG+N             
Sbjct: 225 FKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTL 284

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQG CGSCWTF +TGSLE 
Sbjct: 285 VKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEG 344

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
                 G+ +SLSEQQLVDCA    +QGC GG  S AF+Y+   G L TE  YPY  ++G
Sbjct: 345 TNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNG 404

Query: 193 VCKFSS-ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSST 250
           +C+  +    GV +   VN+T G+E  LQ+A+    PV++A +  VD FR+Y SGVY++ 
Sbjct: 405 LCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNP 464

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCAS 309
            C N   D++H V+A+GYG   G  Y+L+KNSW  NWG  GY  M     N+CG+++ A+
Sbjct: 465 ACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQAT 524

Query: 310 YPV 312
           YP+
Sbjct: 525 YPI 527


>gi|37786769|gb|AAO64471.1| cathepsin L precursor [Fundulus heteroclitus]
          Length = 337

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 167/296 (56%), Gaps = 24/296 (8%)

Query: 35  RLVSSDGLRDFETSVLQ-VIGQARHALSFARFA----RRYGKI---YESVEEMKLRFATF 86
           RLV    L+  E   L+  +G+  + L    F       + +I   Y+   E K + + F
Sbjct: 49  RLVWEKNLKKIELHNLEHSMGKHSYRLGMNHFGDMTHEEFKQIMNGYKHKAERKFKGSLF 108

Query: 87  SKN--LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
            +   L+  RS + +   Y     ++PVKDQG CGSCW FSTTG+LE       GK +SL
Sbjct: 109 LEPNFLEAPRSVDWREKGY-----VTPVKDQGECGSCWAFSTTGALEGQEFTRTGKLVSL 163

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGV 203
           S Q LV+C++   N+GCNGGL  QAF+Y+K N GLD+E++YPY G D   C +  +    
Sbjct: 164 SGQNLVECSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPKFSAA 223

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHA 262
                V+I  G E  L  AV  V PVSVA +   + F+FY+SG+Y   +C +  +D  H 
Sbjct: 224 NDTGFVDIPSGNERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HG 281

Query: 263 VVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           V+AVGYG +    DG  +W++KNSW ENWGD GY  M    KN CGIAT ASYP+V
Sbjct: 282 VLAVGYGFQGEDVDGKKFWIVKNSWSENWGDKGYIYMAKDRKNHCGIATAASYPLV 337


>gi|322799749|gb|EFZ20954.1| hypothetical protein SINV_06041 [Solenopsis invicta]
          Length = 337

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 135/209 (64%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQGHCGSCW FS+TG+LE  + ++ G  +SLSEQ L+DC+  + N GCNGGL   
Sbjct: 131 VTAVKDQGHCGSCWAFSSTGALEGQHFRSTGYLVSLSEQNLIDCSGKYGNNGCNGGLMDY 190

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK N GLDTE+ YPY  ++  C+++  N G      V+I  G E++L+ AV  + P
Sbjct: 191 AFQYIKDNKGLDTEKTYPYEAENDRCRYNPRNSGATDKGYVDIPQGDEEKLKAAVATIGP 250

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED--GVPYWLIKNSWGE 285
           +SVA +   + F+ Y  GVY    C    +D  H V+ VGYG ++  G  YWL+KNSWG+
Sbjct: 251 ISVAIDASHESFQLYSEGVYYDPDCSAENLD--HGVLIVGYGTDETSGHDYWLVKNSWGK 308

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WG  GY KM   K N CGIA+ ASYP+V
Sbjct: 309 TWGQKGYIKMARNKNNHCGIASSASYPLV 337


>gi|391333248|ref|XP_003741031.1| PREDICTED: uncharacterized protein LOC100898636 [Metaseiulus
           occidentalis]
          Length = 642

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 163/304 (53%), Gaps = 59/304 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC----KGLSYRLGLN------------ 108
           + R +GK Y+ VEE  +R   F KN+ +I + N     K +SYR+GL+            
Sbjct: 22  YKRIHGKSYD-VEEESMRRRIFEKNVAMINAHNLLHDLKQVSYRMGLSRLTDATPAEVQA 80

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVKDQG CG+CWTF+ TG++E
Sbjct: 81  LKCLNFTLPNKTSRKSTLGTLQRQDLPEAVDWTQQGYVTPVKDQGKCGACWTFAATGAIE 140

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
             + +A G  +SLSEQ ++DC +   + GC+GGL  +AF+Y+K +GG+D EE+YPY    
Sbjct: 141 GQHFKATGNLVSLSEQNILDCVKTATSNGCSGGLFVEAFDYLKNSGGIDAEESYPYEASG 200

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSST 250
           G C+F  ++V   V     I+ G E ELQ AV  + P+SV  +    GF+ Y  G+Y   
Sbjct: 201 GTCRFRQDSVAATVSGYQAISAGNEAELQEAVATIGPISVGIDSGHPGFQHYTGGIYYEP 260

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCAS 309
           +C      ++HAV+ VGYG E+G  YWL+KNSWG ++G  GY KM   + N CGIAT A+
Sbjct: 261 ECTE---HLSHAVLVVGYGTENGEDYWLVKNSWGASYGLQGYIKMARNRNNNCGIATGAA 317

Query: 310 YPVV 313
           YP+ 
Sbjct: 318 YPIT 321



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/226 (45%), Positives = 149/226 (65%), Gaps = 7/226 (3%)

Query: 90  LDLIRSTN-CKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
            D I S++  + + +R    ++PVK+QG+CGSCW FS TG++E  + +A G+  SLSEQ 
Sbjct: 420 FDAIESSDLSEAIDWRQQGYVTPVKNQGNCGSCWAFSATGAVEGQHFKATGRLESLSEQN 479

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           LVDC +   ++GC+GG   QAF+YIK NGG++TE++YPY   DG C+F  +++G  V   
Sbjct: 480 LVDCVK--ESKGCDGGFFEQAFQYIKDNGGINTEDSYPYEAFDGSCRFREDSIGATVSGY 537

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
             I  G+E +LQ AV  + P+SVA +V +  F+ Y+ GVY    C ++ +D  HAV+ VG
Sbjct: 538 QTIPKGSEADLQKAVSTIGPISVAIDVSNPSFQNYREGVYYEPSCSSSNLD--HAVLVVG 595

Query: 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           YG + G  YWL+KNSWG ++G+ GY +M   K N CGIA+ A+YP 
Sbjct: 596 YGSDGGEDYWLVKNSWGTSFGEQGYVRMARNKGNNCGIASAAAYPT 641


>gi|146147376|gb|ABQ01982.1| cathepsin [Fasciola gigantica]
          Length = 326

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 160/271 (59%), Gaps = 17/271 (6%)

Query: 57  RHALSFARFARRYGKIYE-SVEEMKLRFAT-FSKNLDLI----------RSTNCKGLSYR 104
           RH L F  +     +  + + EE K ++ T   +  D++          R+   K + +R
Sbjct: 57  RHYLGFVTYTLGLNQFTDMTFEEFKAKYLTEMPRASDILSHGIPYEANNRAVPDK-IDWR 115

Query: 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGG 164
               ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GC GG
Sbjct: 116 ESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNMGCMGG 175

Query: 165 LPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVG 224
           L   A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL++ VG
Sbjct: 176 LMENAYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVG 234

Query: 225 LVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWG 284
              P +VA +V   F  Y  G+Y S  C  + + VNHAV+AVGYG + G  YW++KNSWG
Sbjct: 235 AEGPAAVAVDVESDFMMYSGGIYQSRTC--SSLRVNHAVLAVGYGTQSGTDYWIVKNSWG 292

Query: 285 ENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
            +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 293 SSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|10798511|emb|CAC12806.1| cathepsin L1 [Fasciola hepatica]
          Length = 311

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 142/216 (65%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 97  IDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNEKTSISFSEQQLVDCSGPWGNNG 156

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDEL 219
           C+GGL   A+EY+K   GL+TE +YPY   +G C++ +E +GV +V     +  G+E EL
Sbjct: 157 CSGGLMENAYEYLK-RFGLETESSYPYRAVEGQCRY-NEQLGVAKVTGYYTVHSGSEVEL 214

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           ++ VG   P ++A E    F  Y+SG+Y S  C   P  +NHAV+AVGYG +DG  YW++
Sbjct: 215 KNLVGSEGPAAIAVEAESDFMMYRSGIYQSQTC--LPFALNHAVLAVGYGTQDGTDYWIV 272

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           KNSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 273 KNSWGLSWGERGYIRMARNRGNMCGIASLASLPMVA 308


>gi|1498185|dbj|BAA06738.1| cysteine proteinase-1 precursor [Drosophila melanogaster]
          Length = 254

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 135/218 (61%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 39  KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 98

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 99  NGCNGGLMDNAFPYIKDNGGIDTEKSYPYEAIDDSCHFNRAQVGATDRGFTDIPQGDEKK 158

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +   V  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 159 MPEPVPTVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 216

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 217 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 254


>gi|124487918|gb|ABN12042.1| putative cathepsin L precursor [Maconellicoccus hirsutus]
          Length = 211

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/207 (46%), Positives = 131/207 (63%), Gaps = 2/207 (0%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSC+ FSTTGS+E    +  G   SLSEQQ++DC+  + N GC GG+   
Sbjct: 5   VTEVKDQGDCGSCYAFSTTGSIEGQQFRKSGTLKSLSEQQIIDCSVKYGNGGCEGGVMEN 64

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF Y+  NGG+D+E +YPY  ++  C +  EN    + D   + +G E+ L+ AV  V P
Sbjct: 65  AFNYVIDNGGIDSEGSYPYIDRETQCAYKPENSAANIKDFATLPVGDEEMLKLAVAKVGP 124

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +S+A       F+ YKSGVY    C + P D+ HAV+ VGYG EDG  YWL+KNSW  +W
Sbjct: 125 ISIAINTSPRSFKLYKSGVYYDKDCKSDPDDLTHAVLVVGYGTEDGKDYWLVKNSWNTDW 184

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G++GY KM   K N CGIA+ A+YP V
Sbjct: 185 GENGYIKMARNKNNHCGIASYATYPTV 211


>gi|261824891|pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824892|pdb|3H6S|B Chain B, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824893|pdb|3H6S|C Chain C, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824894|pdb|3H6S|D Chain D, Strucure Of Clitocypin - Cathepsin V Complex
 gi|310942696|pdb|3KFQ|A Chain A, Unreduced Cathepsin V In Complex With Stefin A
 gi|310942697|pdb|3KFQ|B Chain B, Unreduced Cathepsin V In Complex With Stefin A
          Length = 221

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 135/221 (61%), Gaps = 8/221 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+Q  CGS W FS TG+LE    +  GK +SLSEQ LVDC++   N
Sbjct: 3   KSVDWRKKGYVTPVKNQKQCGSXWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN   Q      +  G E  
Sbjct: 63  QGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPGKEKA 122

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGYG E    D 
Sbjct: 123 LMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSDN 180

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 181 SKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 221


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/220 (47%), Positives = 131/220 (59%), Gaps = 9/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+Q  CGSCW FSTTGSLE       G   SLSEQQLVDC+  + N G
Sbjct: 112 VDWRTKGAVTPVKNQKQCGSCWAFSTTGSLEGQTFLKKGTLPSLSEQQLVDCSDKYGNHG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   AF+YI+ NGG+D+E +YPY  K+G C+F    V        +I     D LQ
Sbjct: 172 CQGGLMDNAFKYIEANGGIDSEASYPYEAKNGKCRFQQSAVAATCTGYKDIPHDDIDGLQ 231

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE------DG 273
            AV  V P+SVA +     F+ Y +GVY    C +T +D  H V+AVGYG E      + 
Sbjct: 232 DAVANVGPISVAMDASHSSFQLYAAGVYDPLLCSSTRLD--HGVLAVGYGTEPSGLFHEE 289

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
            PYWL+KNSWG +WG  GYFK+    N CGIAT ASYP V
Sbjct: 290 KPYWLVKNSWGPDWGQQGYFKIVRKDNKCGIATDASYPTV 329


>gi|2146900|pir||S67481 cathepsin L-like cysteine proteinase (EC 3.4.22.-) CP1 [similarity]
           - fruit fly (Drosophila melanogaster)  (fragment)
          Length = 218

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 135/218 (61%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VKDQGHCGSCW FS+TG+LE  + +  G  +SLSEQ LVDC+  + N
Sbjct: 3   KSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GCNGGL   AF YIK NGG+DTE++YPY   D  C F+   VG       +I  G E +
Sbjct: 63  NGCNGGLMDNAFPYIKDNGGIDTEKSYPYEAIDDSCHFNRAQVGATDRGFTDIPQGDEKK 122

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           +   V  V PVSVA +   + F+FY  GVY+  +C    +D  H V+ VG+G  E G  Y
Sbjct: 123 MPEPVPTVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDY 180

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct: 181 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 218


>gi|21263041|gb|AAM44832.1|AF510856_1 cathepsin L2 [Fasciola gigantica]
          Length = 326

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 139/215 (64%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNMG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL+
Sbjct: 172 CMGGLMENAYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y  G+Y S  C  + + VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFMMYSGGIYQSRTC--SSLHVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGSSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|311265493|ref|XP_003130681.1| PREDICTED: cathepsin L1-like [Sus scrofa]
          Length = 332

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 139/229 (60%), Gaps = 8/229 (3%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LD   +     + +R    ++ VK+QGHCGSCW FS TG+LE    +   K ISLSEQ L
Sbjct: 107 LDAGSALTPHSVDWREKGYVTAVKNQGHCGSCWAFSATGALEGQMFRKTSKLISLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC+    N+GCNGGL   AF+YIK NGGLD+EE+YPY GKDG CK+  ++        V
Sbjct: 167 VDCSWPEGNEGCNGGLMDNAFQYIKDNGGLDSEESYPYFGKDGSCKYKPQSSAANDTGYV 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           +I    E  L  AV  V P+SV  +   + F+FY +G+Y   +C  +  D++H V+ VGY
Sbjct: 227 DIPK-QEKALMKAVATVGPISVGIDASHESFQFYSTGIYFEPQC--SSEDLDHGVLVVGY 283

Query: 269 GVE---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           GVE       YWL+KNSWG  WG  GY KM   + N CGIAT ASYPVV
Sbjct: 284 GVEGAHSNNKYWLVKNSWGNTWGMDGYIKMTKDQNNHCGIATMASYPVV 332


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/207 (47%), Positives = 131/207 (63%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ +KDQG CGSCW FSTTGSLE  + +A G  +SLSEQ LVDC++   N+GC GG   Q
Sbjct: 126 VTDIKDQGQCGSCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQEGNKGCEGGDMDQ 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
            F+YI  N G+DTE+ YPY  K+  CKF +  +G  +    ++T G ED L+ A   + P
Sbjct: 186 GFQYIIQNKGIDTEQCYPYKAKNHRCKFDNSCIGATMSSFTDVTSGDEDALKQACANIGP 245

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +     F+FY SGVY+  +C +T +D  H V+ VGYG      YWL+KNSWG  W
Sbjct: 246 ISVGIDASHQSFQFYSSGVYNEFECSSTKLD--HGVLVVGYGTYGSKDYWLVKNSWGTVW 303

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY  M   K N CG+AT AS+PVV
Sbjct: 304 GNEGYIMMSRNKDNQCGVATDASFPVV 330


>gi|4574304|gb|AAD23996.1|AF112566_1 cathepsin [Fasciola gigantica]
          Length = 326

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ +KDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTELKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNMG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL+
Sbjct: 172 CSGGLMENAYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y  G+Y S  C  + + VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFMMYSGGIYQSRTC--SSLRVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGSSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|21483184|gb|AAF86584.1| cathepsin L cysteine protease [Haemonchus contortus]
          Length = 355

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS+TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 150 VTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDL 209

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTE++YPY G++  C F    VG      V++  G E+ L+ AV    P
Sbjct: 210 AFEYIKENHGVDTEDSYPYVGRETKCHFKRNTVGADDKGFVDLPEGDEEALKKAVATQGP 269

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWL+KNSWG  
Sbjct: 270 ISIAIDAGHRSFQLYKKGVYFDEECSSEELD--HGVLLVGYGTDPEAGDYWLVKNSWGPT 327

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 328 WGEKGYIRIARNRNNHCGVATKASYPLV 355


>gi|198432221|ref|XP_002130541.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 330

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/220 (45%), Positives = 137/220 (62%), Gaps = 3/220 (1%)

Query: 97  NCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
           N   + +R    ++PVK+Q  CGSCW FS TGSLE  +     K +SLSEQQL+DC+   
Sbjct: 111 NPTTVDWRTQGYVTPVKNQLQCGSCWAFSATGSLEGQHFAKTKKLVSLSEQQLIDCSTKQ 170

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
            + GC GG P  AF YI   GG+++E  YPY  K+ VC+F+   V   +   V+IT  +E
Sbjct: 171 GDLGCGGGYPDWAFAYINQVGGIESETNYPYEAKNDVCRFNVSEVAATLTGCVDITPDSE 230

Query: 217 DELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
            +L+ AVG + PVSV  +     F+ Y SG+Y   +C ++P  ++H V+AVGYG ++G  
Sbjct: 231 TQLEKAVGSIGPVSVLIDASHISFQLYGSGIYYEQQCSSSPASLDHGVLAVGYGADNGQE 290

Query: 276 YWLIKNSWGENWGD-HGYFKMEMGK-NMCGIATCASYPVV 313
           YW++KNSWGE WG   GY KM   K N CGIAT ASYP+V
Sbjct: 291 YWMVKNSWGEGWGKLGGYIKMAKNKNNNCGIATQASYPIV 330


>gi|354502595|ref|XP_003513369.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
          Length = 330

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/226 (47%), Positives = 140/226 (61%), Gaps = 11/226 (4%)

Query: 91  DLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLV 150
           D+ +S + + LSY     ++PVKDQG C SCW FS  GSLE    +  G+ ISLSEQ LV
Sbjct: 113 DVPKSVDWRNLSY-----VTPVKDQGQCSSCWAFSAVGSLEGQIFRKTGQLISLSEQNLV 167

Query: 151 DCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVN 210
           DC+ ++ N GC GGL   AF Y+K N GLDT  +YPY  ++G C++  +N    V D V 
Sbjct: 168 DCSWSYGNIGCFGGLMEYAFRYVKENRGLDTRVSYPYEARNGPCRYDPKNSAANVTDFVK 227

Query: 211 ITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 269
           I + +ED L  AV  V P+SV  +     FRFYK G+Y    C ++ +D  HAV+ VGYG
Sbjct: 228 IPI-SEDALMKAVATVGPISVGVDSHHHSFRFYKGGMYYEPHCSSSNLD--HAVLVVGYG 284

Query: 270 VE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            E DG  YW++KNSWG+ WG +GY KM   + N CGIAT A YP V
Sbjct: 285 EESDGNKYWMVKNSWGQGWGMNGYIKMARDRNNNCGIATYAIYPTV 330


>gi|387015022|gb|AFJ49630.1| Cathepsin L1-like [Crotalus adamanteus]
          Length = 338

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/223 (47%), Positives = 137/223 (61%), Gaps = 10/223 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FS TG+LE  + +  GK +SLSEQ L+DC+    N
Sbjct: 118 KSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQHFRKTGKLVSLSEQNLIDCSGPEGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           QGCNGGL  QAF+YIK N G+D+EE+YPY GKD   C +  E         V+I  G E 
Sbjct: 178 QGCNGGLMDQAFQYIKDNNGIDSEESYPYIGKDDEDCLYKPEYNSANDTGFVDIPEGRER 237

Query: 218 ELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----- 271
            L  AV  V P+SVA +     F+FY+SGVY   +C +  +D  H V+ VGYG E     
Sbjct: 238 ALMKAVAAVGPISVAIDASHTSFQFYESGVYYEPQCNSEELD--HGVLVVGYGYEGTDDD 295

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +   YW++KNSW E WGD GY  M   + N CGIA+ ASYP+V
Sbjct: 296 NKKRYWIVKNSWSEKWGDQGYIHMAKDRSNNCGIASAASYPMV 338


>gi|344257452|gb|EGW13556.1| Cathepsin L1 [Cricetulus griseus]
          Length = 290

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 108/226 (47%), Positives = 140/226 (61%), Gaps = 11/226 (4%)

Query: 91  DLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLV 150
           D+ +S + + LSY     ++PVKDQG C SCW FS  GSLE    +  G+ ISLSEQ LV
Sbjct: 73  DVPKSVDWRNLSY-----VTPVKDQGQCSSCWAFSAVGSLEGQIFRKTGQLISLSEQNLV 127

Query: 151 DCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVN 210
           DC+ ++ N GC GGL   AF Y+K N GLDT  +YPY  ++G C++  +N    V D V 
Sbjct: 128 DCSWSYGNIGCFGGLMEYAFRYVKENRGLDTRVSYPYEARNGPCRYDPKNSAANVTDFVK 187

Query: 211 ITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 269
           I + +ED L  AV  V P+SV  +     FRFYK G+Y    C ++ +D  HAV+ VGYG
Sbjct: 188 IPI-SEDALMKAVATVGPISVGVDSHHHSFRFYKGGMYYEPHCSSSNLD--HAVLVVGYG 244

Query: 270 VE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            E DG  YW++KNSWG+ WG +GY KM   + N CGIAT A YP V
Sbjct: 245 EESDGNKYWMVKNSWGQGWGMNGYIKMARDRNNNCGIATYAIYPTV 290


>gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 158/304 (51%), Gaps = 65/304 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           ++GK Y ++ E   RF  F  NL  I   N    +Y+LGLN                   
Sbjct: 58  KHGKTYNALGEKDRRFQIFKDNLRFIDEHNSGDHTYKLGLNKFADLTNEEYRMTYTGIKT 117

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             ++ VKDQG CGSCW FSTTGS+E   
Sbjct: 118 IDDKKKLSKMKSDRYAYRSGDSLPEYVDWREQGAVTDVKDQGSCGSCWAFSTTGSVEGVN 177

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
               G  IS+SEQ+LV+C  ++N QGCNGGL   AFE+I  NGG+DTEE YPYTGKDG C
Sbjct: 178 KIVTGDLISVSEQELVNCDTSYN-QGCNGGLMDYAFEFIIKNGGIDTEEDYPYTGKDGKC 236

Query: 195 KFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKC 252
             + +N  V  +DS  ++ +  E  L+ AV   +PV+VA E     F+FY SG+++ + C
Sbjct: 237 DKNKKNAKVVTIDSYEDVPVNDESSLKKAVS-NQPVAVAIEAGGRDFQFYTSGIFTGS-C 294

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCA 308
           G     ++H V+A GYG EDG  YWL+KNSWG  WG+ GY KME         CGIA  A
Sbjct: 295 GTA---LDHGVLAAGYGTEDGKDYWLVKNSWGAEWGEGGYLKMERNIADKSGKCGIAMEA 351

Query: 309 SYPV 312
           SYP+
Sbjct: 352 SYPI 355


>gi|291224868|ref|XP_002732424.1| PREDICTED: cathepsin L-like [Saccoglossus kowalevskii]
          Length = 823

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 123/201 (61%), Gaps = 4/201 (1%)

Query: 115 QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 174
           +G CGSCW FSTTGSLE    +  GK   LSEQQLVDC+  F N GCNGGL   AFEYIK
Sbjct: 625 KGQCGSCWAFSTTGSLEGQTFKKTGKLPDLSEQQLVDCSTQFGNHGCNGGLMDLAFEYIK 684

Query: 175 YNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 234
              G++ E  YPY  KDG C F    V       V+I    E+ L+ AV  + P+SVA +
Sbjct: 685 AAPGIEGEMDYPYLAKDGRCMFDQSKVVATDTGYVDIPSMDENALKEAVATIGPISVAID 744

Query: 235 V-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYF 293
                F+ YKSGVY+   C +  +D  H V+AVGYG EDG  YWL+KNSWG++WG  GY 
Sbjct: 745 AGHPSFQMYKSGVYNEPGCSSERLD--HGVLAVGYGTEDGQDYWLVKNSWGDSWGQAGYI 802

Query: 294 KMEMG-KNMCGIATCASYPVV 313
            M     N CGIAT ASYP+V
Sbjct: 803 MMSRNMNNQCGIATQASYPLV 823


>gi|308474437|ref|XP_003099440.1| CRE-CPL-1 protein [Caenorhabditis remanei]
 gi|308266846|gb|EFP10799.1| CRE-CPL-1 protein [Caenorhabditis remanei]
          Length = 337

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 98/208 (47%), Positives = 136/208 (65%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +  GK +SLSEQ LVDC+  + N GCNGGL  Q
Sbjct: 132 VTDVKNQGMCGSCWAFSATGALEGQHARKLGKLVSLSEQNLVDCSTKYGNHGCNGGLMDQ 191

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI+ N G+DTE++YPY G+D  C FS ++VG       ++  G E++L+ AV    P
Sbjct: 192 AFEYIRDNHGVDTEDSYPYKGRDMKCHFSKKDVGADDKGYTDLPEGDEEQLKIAVATQGP 251

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWL+KNSWG  
Sbjct: 252 ISIAIDAGHRSFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEHGDYWLVKNSWGTG 309

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 310 WGEKGYIRIARNRNNHCGVATKASYPLV 337


>gi|323451241|gb|EGB07119.1| hypothetical protein AURANDRAFT_54023 [Aureococcus anophagefferens]
          Length = 377

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 155/314 (49%), Gaps = 60/314 (19%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           +F  F  ++ K YE+VEE   R   F++N  ++   + K   + LGL+            
Sbjct: 64  AFMTFMTKFEKTYETVEEWAHRLTVFAQNAKIVLEHDAKAEGFALGLDNQFADWTAEEFA 123

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++ +K+QG CGSCWTFST  S+E 
Sbjct: 124 SYQKLHSRPKPSQAGATHEVSDKAAPTAVDWRTEGVVADIKNQGSCGSCWTFSTVVSIEG 183

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQG-------CNGGLPSQAFEYIKYN--GGLDTEE 183
           A  +  GK ++LSEQ LVDC +     G       C+GGL   AF+YI  N  GG+DTE 
Sbjct: 184 AAARKTGKLVTLSEQNLVDCVKKDQIDGGDECCMGCSGGLMDNAFDYIIKNQDGGIDTEA 243

Query: 184 AYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYK 243
           +Y YTGKDG C F   NVG  + +  ++ +G E  L  A+    PVS+A +    ++ Y 
Sbjct: 244 SYGYTGKDGTCAFDKANVGATISNWTDVAVGDEVALADALANAGPVSIALDASKQWQLYS 303

Query: 244 SGVY---SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN 300
            G+    S   C + P   +H V  VGYG +DGV YW I+NSWG  WG+ GY ++E G N
Sbjct: 304 GGILKPRSILGCSSDPTHADHGVAIVGYGTDDGVDYWWIRNSWGTTWGESGYMRLERGVN 363

Query: 301 MCGIATCASYPVVA 314
            CG+A  ASYP+ A
Sbjct: 364 ACGVANFASYPIAA 377


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/256 (46%), Positives = 150/256 (58%), Gaps = 12/256 (4%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           LSF  F  +Y   Y+ VE    R    S NL          + +R    ++P+KDQG CG
Sbjct: 93  LSFEEFKGKYFG-YKHVEREFAR----SNNLHQEVEAAPTSIDWRTSNAVTPIKDQGQCG 147

Query: 120 SCWTFSTTGSLEAAY-HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           SCW FS TGS+E A+  Q      SLSEQQLVDC+ ++ + GCNGGL   AFEYI  N G
Sbjct: 148 SCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGDAGCNGGLMDYAFEYIIANKG 207

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD- 237
           +  E AYPY G  G+C+ S   V V +    ++  G E  L +AVG V PVSVA E    
Sbjct: 208 ICAESAYPYKGVGGLCQKSCTKV-VTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQA 266

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM 297
           GF+FY SGV+S T CG+   +++H V+AVGYG      YW++KNSWG +WG+ GY +M  
Sbjct: 267 GFQFYSSGVFSGT-CGH---NLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESGYIRMIR 322

Query: 298 GKNMCGIATCASYPVV 313
            KN CGIA   SYP V
Sbjct: 323 NKNQCGIAIQPSYPTV 338


>gi|45550334|gb|AAS67923.1| cathepsin L [Artemia franciscana]
          Length = 226

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/215 (47%), Positives = 134/215 (62%), Gaps = 2/215 (0%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK QG C SC  FS TG+LE+   +  GK ISLSEQ L+DC+  + N G
Sbjct: 12  VDWREKGAVTPVKYQGQCASCLAFSPTGALESQTFRKTGKLISLSEQNLIDCSGEYGNLG 71

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  SQAFEYIK N G+DTE  Y Y  K+  C+ +  N G   L  VNI  G ED+L+
Sbjct: 72  CKGGWISQAFEYIKDNKGIDTENKYHYEAKENFCRDNPRNRGAVALGFVNIPSGEEDKLK 131

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVS   +V  +GF+FY  GVY    C  +   +NHAV+ +G G ++G  YWL+
Sbjct: 132 AAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCKTSFEHLNHAVLVIGCGSDNGEDYWLV 191

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSW ++WGD GY K+    KN CG+AT A YP+V
Sbjct: 192 KNSWSKHWGDEGYLKIARNRKNHCGVATAALYPIV 226


>gi|189053498|dbj|BAG35664.1| unnamed protein product [Homo sapiens]
          Length = 334

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 107/230 (46%), Positives = 138/230 (60%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  C SCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCVSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG  ++AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +  G E  L  AV  V P+SVA +     F+FYKSG+Y    C +  +D  H V+ VGY
Sbjct: 227 VVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334


>gi|21489677|gb|AAM55195.1|AF412313_1 cathepsin L cysteine protease [Haemonchus contortus]
 gi|21483192|gb|AAL14224.1| cathepsin L [Haemonchus contortus]
          Length = 354

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS+TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 149 VTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDL 208

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTE++YPY G++  C F    VG      V++  G E+ L+ AV    P
Sbjct: 209 AFEYIKENHGVDTEDSYPYVGRETKCHFKRNAVGADDKGFVDLPEGDEEALKKAVATQGP 268

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWL+KNSWG  
Sbjct: 269 ISIAIDAGHRSFQLYKKGVYFDEECSSEELD--HGVLLVGYGTDPEAGDYWLVKNSWGPT 326

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 327 WGEKGYIRIARNRNNHCGVATKASYPLV 354


>gi|7271889|gb|AAF44675.1|AF239264_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 139/215 (64%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL+
Sbjct: 172 CMGGLMENAYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y  G+Y S  C  + + VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFTMYSGGIYQSRTC--SSLRVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGSSWGERGYIRMVRNRGNMCGIASLASLPMVA 323


>gi|1841466|emb|CAA71892.1| putative pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 106

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 92/106 (86%), Positives = 101/106 (95%)

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           VNITLGAEDEL++AV LVRPVS+AFEV+ GF+ YKSGVYSST+CGNTPMDVNHAV+AVGY
Sbjct: 1   VNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYSSTECGNTPMDVNHAVLAVGY 60

Query: 269 GVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           GVE+GVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct: 61  GVENGVPYWLIKNSWGADWGDDGYFKMEMGKNMCGIATCASYPVVA 106


>gi|221117518|ref|XP_002157675.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 340

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 110/249 (44%), Positives = 143/249 (57%), Gaps = 6/249 (2%)

Query: 71  KIYESVEEMKLRFATFSKNLDLIRSTNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTT 127
           KIY    ++   F   +K    +  +N      + +R    ++PVK+QG CGSCW FSTT
Sbjct: 92  KIYGGCFKLPKSFINITKGSTFLPPSNVNIPDEVDWRTKGYVNPVKNQGQCGSCWAFSTT 151

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE    +  G    LSEQ LVDC Q++ N+ CNGG    AF+YI  N G+D+E  YPY
Sbjct: 152 GALEGQTFRKTGVLPDLSEQNLVDCTQSYGNEACNGGWMDNAFKYISDNKGIDSEAGYPY 211

Query: 188 TGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
             K  G C ++ +         V+I  G ED L+ AV  V P+SVA +   D F  Y+SG
Sbjct: 212 YAKALGYCYYNQQFNVASDTGFVDIASGDEDALKVAVATVGPISVAIDATKDSFMRYQSG 271

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGI 304
           VY    CGN   +++HAV+ VGYG EDG  +WL+KNSW   WGD GY KM     N CGI
Sbjct: 272 VYYEPTCGNGLENLDHAVLVVGYGTEDGRDFWLVKNSWDITWGDQGYIKMSRNMSNQCGI 331

Query: 305 ATCASYPVV 313
           AT ASYP+V
Sbjct: 332 ATKASYPLV 340


>gi|115715524|ref|XP_780580.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 334

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 156/307 (50%), Gaps = 59/307 (19%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN----------- 108
           ++   +GK Y S EE   R   + KNLD++   N K      +Y LG+N           
Sbjct: 30  QWKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFTYDLGMNQFADLKNEEFV 89

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  ++PVK+Q  CGSCW FS TGS
Sbjct: 90  SLMNGFRGNSSKATRGSTFLPPSNVFDMPTMVDWRTKGYVTPVKNQLQCGSCWAFSATGS 149

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE  + +  GK +SLSEQ LVDC+    N GC GGL  QAF+YI   GG+DTE +YPYT 
Sbjct: 150 LEGQHFKKTGKLVSLSEQNLVDCSGKEGNMGCEGGLMDQAFQYILDVGGIDTEMSYPYTA 209

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYS 248
            DG C F+  N+G       ++T G+E  LQ AV  V P+SVA +     F+ YKSGVY+
Sbjct: 210 MDGQCHFNKANIGATDTGYTDVTTGSESALQMAVASVGPISVAIDASHQSFQLYKSGVYN 269

Query: 249 STKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIAT 306
              C +T +D  H V+AVGYG   DG  Y+   +SWG  WG +GY  M   K N CGIAT
Sbjct: 270 EPACSSTLLD--HGVLAVGYGTSSDGTDYFFFFHSWGAAWGMNGYLWMSRNKDNQCGIAT 327

Query: 307 CASYPVV 313
            ASYP+V
Sbjct: 328 KASYPLV 334


>gi|163310848|pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola
           Hepatica
          Length = 310

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGS W FSTTG++E  Y +     IS SEQQLVDC++ + N G
Sbjct: 96  IDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNG 155

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL+
Sbjct: 156 CGGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELK 214

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++K
Sbjct: 215 NLVGAEGPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVK 272

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 273 NSWGLSWGERGYIRMVRNRGNMCGIASLASLPMVA 307


>gi|167427529|gb|ABZ80401.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 4/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GCNGG    
Sbjct: 97  VTEVKDQGDCGSCWAFSTTGAVEGQYMKNPKANISFSEQQLVDCSGDYGNHGCNGGFMEN 156

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY++   GL+TE +YPY  ++G CK+ S    V+V        G E +L H VG   P
Sbjct: 157 AYEYLERR-GLETESSYPYKAEEGPCKYDSRLGVVEVFGYFIEHSGIESKLAHLVGDKGP 215

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
            +VA +V   F  Y+ G+Y+S  C +  +  NHA++ VGYG +DG  YW++KNSWG  WG
Sbjct: 216 AAVAVDVESDFLMYRGGIYASRNCSSEKL--NHAMLVVGYGTQDGTDYWIVKNSWGSLWG 273

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
           DHGY +M   + NMCGIA+ AS PVV
Sbjct: 274 DHGYIRMARNRDNMCGIASAASVPVV 299


>gi|158268255|gb|ABW25047.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 136/208 (65%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 149 VTDVKNQGMCGSCWAFSATGALEGQHARASGKMVSLSEQNLVDCSTKYGNHGCNGGLMDL 208

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTEE+YPY G++  C F  +++G +    V++  G E+ L+ AV    P
Sbjct: 209 AFEYIKDNHGIDTEESYPYVGRETKCHFKKKDIGAEDKGFVDLPEGDEEALKVAVATQGP 268

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWLIKNSWG  
Sbjct: 269 ISIAIDAGHRTFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEAGDYWLIKNSWGPG 326

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 327 WGEKGYIRIARNRSNHCGVATKASYPLV 354


>gi|441593109|ref|XP_003260582.2| PREDICTED: cathepsin L2 isoform 1 [Nomascus leucogenys]
          Length = 334

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 106/230 (46%), Positives = 136/230 (59%), Gaps = 13/230 (5%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           LDL +S + +   Y     ++PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ L
Sbjct: 112 LDLPKSVDWRKKGY-----VTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGG   +AF+Y+K NGGLD+EE+YPY   D +CK+  EN         
Sbjct: 167 VDCSRPQGNQGCNGGFMGKAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTGFT 226

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
            +  G E  L  AV  V P+SVA +     F+FY  G+Y    C +  +D  H V+ VGY
Sbjct: 227 VVPPGKEKALMKAVATVGPISVAMDAGHSSFQFYNQGIYFEPDCSSENLD--HGVLVVGY 284

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334


>gi|379991182|emb|CCA61803.1| cathepsin protein CatL1-MM3p, partial [Fasciola hepatica]
          Length = 326

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 109/271 (40%), Positives = 160/271 (59%), Gaps = 17/271 (6%)

Query: 57  RHALSFARFARRYGKIYE-SVEEMKLRFAT-FSKNLDLI----------RSTNCKGLSYR 104
           RH L    +     +  + + EE K ++ T  S+  D++          R+   K + +R
Sbjct: 57  RHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAVPDK-IDWR 115

Query: 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGG 164
               ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GC+GG
Sbjct: 116 ESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGG 175

Query: 165 LPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVG 224
           L   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL++ VG
Sbjct: 176 LMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVG 234

Query: 225 LVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWG 284
              P +VA +V   F  Y  G+Y S  C  +P+ +NHAV+AVGYG + G  YW++KNSWG
Sbjct: 235 AEGPAAVAVDVESDFMMYSGGIYQSQTC--SPLGLNHAVLAVGYGTQGGTDYWIVKNSWG 292

Query: 285 ENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
             WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 293 SYWGERGYIRMARNRGNMCGIASLASLPMVA 323


>gi|224460525|gb|ACN43674.1| cathepsin L [Paralichthys olivaceus]
          Length = 334

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 101/207 (48%), Positives = 132/207 (63%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW+FS+TG+LE    +  G+ +SLSEQ+LVDC+  + N GCNGG    
Sbjct: 130 VTPVKNQGSCGSCWSFSSTGALEGQNFRKTGRLVSLSEQELVDCSGNYGNYGCNGGWMDN 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YI   GG+ TE++YPY G+ G C+ +   +G       +I  G E  L+ AV    P
Sbjct: 190 AFRYIVNKGGIHTEDSYPYEGQVGQCRANYGEIGATCTGYYDIPSGNEHALKEAVATFGP 249

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSVA    D  F+ Y SGVY++  C  T +D  HAV+ VGYG E G  YWL+KNSWG  W
Sbjct: 250 VSVAIHASDQSFQLYHSGVYNNPYCSGTALD--HAVLIVGYGTEYGQDYWLVKNSWGPAW 307

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY KM   + N CGIA+ AS+P+V
Sbjct: 308 GDQGYIKMSRNRYNQCGIASAASFPLV 334


>gi|158268253|gb|ABW25046.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 136/208 (65%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +A GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 149 VTDVKNQGMCGSCWAFSATGALEGQHARASGKMVSLSEQNLVDCSTKYGNHGCNGGLMDL 208

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTEE+YPY G++  C F  +++G +    V++  G E+ L+ AV    P
Sbjct: 209 AFEYIKDNHGIDTEESYPYVGRETKCHFKKKDIGAEDKGFVDLPEGDEEALKVAVATQGP 268

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWLIKNSWG  
Sbjct: 269 ISIAIDAGHRTFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEAGDYWLIKNSWGPG 326

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 327 WGEKGYIRIARNRSNHCGVATKASYPLV 354


>gi|313235127|emb|CBY24999.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/205 (50%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FST  SLE+ +  A     SLSEQQLVDC+  + N GC+GGL +Q
Sbjct: 122 VTPVKDQGQCGSCWAFSTIASLESQWALAGNALTSLSEQQLVDCSMNWGNYGCSGGLMTQ 181

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
            F YI  N G+DTE +YPYT +DG C F+  NVG  +    NI  G E  L +AV +V P
Sbjct: 182 GFTYIHDNNGVDTEASYPYTAQDGKCVFNPANVGTSLTSCYNIASGDEAALANAVQMVGP 241

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y SGVY    C +  +D  H V AVGYG  +G  ++++KNSW   W
Sbjct: 242 MSVAIDASHMSFQLYTSGVYYEPNCSSQFLD--HGVTAVGYGSSNGNDFFIVKNSWAATW 299

Query: 288 GDHGYFKMEMGK-NMCGIATCASYP 311
           GD+GY  M   K N CGIAT ASYP
Sbjct: 300 GDNGYIMMSRNKSNNCGIATSASYP 324


>gi|111036374|dbj|BAF02516.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/208 (49%), Positives = 129/208 (62%), Gaps = 6/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+KDQG CGSCW FS TG+LE    +  GK ISLSEQQLVDC+    N+GCNGG  + 
Sbjct: 134 VTPIKDQGDCGSCWAFSATGALEGQLKRKTGKLISLSEQQLVDCSTYTGNEGCNGGDMND 193

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF Y   NG  ++E  YPYT  DG CKF+S  V  +V   V +    ED+L+ +V  V P
Sbjct: 194 AFRYWMRNGA-ESESDYPYTAMDGKCKFNSSKVVTKVSKFVKVPKKREDQLKLSVAQVGP 252

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG-VPYWLIKNSWGEN 286
           VSVA +    GF  YK G+Y    C    +D  HAV+ VGY  +     YW++KNSWGE+
Sbjct: 253 VSVAIDATSSGFMLYKKGIYQDNTCSQQYLD--HAVLVVGYDADKTRQKYWIVKNSWGED 310

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG  GY  M   K NMCGIAT ASYP++
Sbjct: 311 WGQRGYIWMARDKGNMCGIATMASYPLI 338


>gi|149617838|ref|XP_001521715.1| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 338

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 135/212 (63%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QGHCGSCW FSTTG+LE    +  G+ ISLSEQ LVDC+    NQGC+GG+   
Sbjct: 129 VTPVKNQGHCGSCWAFSTTGALEGQLFRKSGRLISLSEQNLVDCSWQQGNQGCHGGIVDL 188

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YI  N G+D+E+ YPYT KD   C F  E     V   V+I   +E+ L  AV  V 
Sbjct: 189 AFQYILQNQGIDSEDCYPYTAKDTAQCTFKPECATAPVTGFVDIPPHSEEALMKAVATVG 248

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSV  +     FRFY+SG++   KC +  +D  HAV+ VGYG E     G  YW++KNS
Sbjct: 249 PVSVGIDASSTSFRFYQSGIFYDPKCSSESLD--HAVLVVGYGYEREDEAGKKYWIVKNS 306

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG++WGD GY  M   + N CGIAT ASYP++
Sbjct: 307 WGKHWGDRGYVYMSKDRGNHCGIATVASYPLL 338


>gi|268560858|ref|XP_002638172.1| C. briggsae CBR-CPL-1 protein [Caenorhabditis briggsae]
          Length = 336

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/208 (47%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +  G+ +SLSEQ LVDC+  + N GCNGGL  Q
Sbjct: 131 VTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQ 190

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI+ N G+DTEE+YPY G+D  C F+ + VG      V+   G E++L+ AV    P
Sbjct: 191 AFEYIRDNHGVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGP 250

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWL+KNSWG  
Sbjct: 251 ISIAIDAGHRSFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEHGDYWLVKNSWGTG 308

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 309 WGEKGYIRIARNRNNHCGVATKASYPLV 336


>gi|66810271|ref|XP_638859.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
 gi|166201983|sp|Q23894.2|CYSP3_DICDI RecName: Full=Cysteine proteinase 3; AltName: Full=Cysteine
           proteinase II; Flags: Precursor
 gi|60467526|gb|EAL65548.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 166/318 (52%), Gaps = 60/318 (18%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
            V    ++  SF  + R   K Y   E M  R+  F KN+D + + N KG    LGLN  
Sbjct: 23  NVFSHKQYQDSFIDWMRSNNKAYTHKEFMP-RYEEFKKNMDYVHNWNSKGSKTVLGLNQH 81

Query: 109 ---------------------------------------------------ISPVKDQGH 117
                                                              ++PVKDQG 
Sbjct: 82  ADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQ 141

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSC++FSTTGS+E       GK +SLSEQ ++DC+ +F N+GCNGGL + AFEYI  N 
Sbjct: 142 CGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNN 201

Query: 178 GLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV 236
           GL++EE YPY  K +  CKF   +V  ++     I  G E++LQ+A+ L+ PVSVA +  
Sbjct: 202 GLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNAL-LLNPVSVAIDAS 260

Query: 237 -DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM 295
            + F+ Y +GVY    C  +  D++H V+AVG G ++G  Y+++KNSWG +WG +GY  M
Sbjct: 261 HNSFQLYTAGVYYEPAC--SSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHM 318

Query: 296 EMGK-NMCGIATCASYPV 312
              K N CGI+T ASYP+
Sbjct: 319 ARNKDNNCGISTMASYPI 336


>gi|253796148|gb|ACT35690.1| cathepsin L-like cysteine proteinase [Ditylenchus destructor]
          Length = 376

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/260 (42%), Positives = 154/260 (59%), Gaps = 14/260 (5%)

Query: 60  LSFARFARR--YGKIY-ESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQG 116
           L F+ + +   Y +IY + +     RF     N+++  S + +   Y     ++ VK+QG
Sbjct: 125 LPFSEYQKLNGYRRIYGDPLRRNSSRFLA-PHNVEVPESMDWRDHGY-----VTEVKNQG 178

Query: 117 HCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYN 176
            CGSCW FS TGSLE  + ++ G  +SLSEQ LVDC+ A+ N GCNGGL   AF+YIK N
Sbjct: 179 MCGSCWAFSATGSLEGQHKRSKGTLVSLSEQNLVDCSAAYGNNGCNGGLMDFAFQYIKEN 238

Query: 177 GGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV- 235
            G+DTE +YPY  +   C F   +VG      +++  G ED+L+ AV    P+SVA +  
Sbjct: 239 HGIDTETSYPYKARQKKCHFQRSSVGADDTGFMDLPEGDEDQLKIAVATQGPISVAIDAG 298

Query: 236 VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFK 294
              F+ YK+GVY   +C +  +D  H V+ VGYG + D   YW++KNSWG  WG+ GY +
Sbjct: 299 HRSFQLYKTGVYYEKECSSEQLD--HGVLVVGYGTDPDHGDYWIVKNSWGTTWGEQGYVR 356

Query: 295 MEMGK-NMCGIATCASYPVV 313
           M   K N CGIAT ASYP+V
Sbjct: 357 MARNKNNHCGIATKASYPLV 376


>gi|392873948|gb|AFM85806.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 142/221 (64%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CGSCW FSTTG+LE  + +  G+ +SLSEQ LV+C++   N
Sbjct: 119 KHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALEGQHFRRTGQLVSLSEQNLVECSKPEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL  QAF+Y+K NGG+D+E++YPY G D   C ++ +         V+I  G E 
Sbjct: 179 EGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKER 238

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  A+  V PVSVA +     F+FY+SG+Y   +C +T  D++H V+ VGYGVE    D
Sbjct: 239 ALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECSST--DLDHGVLVVGYGVEKRDTD 296

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           G  YW++KNSW E  G +GY  M   K N CGIAT ASYP+
Sbjct: 297 GKKYWIVKNSWSEKLGQNGYILMAKDKDNHCGIATAASYPL 337


>gi|444514070|gb|ELV10520.1| Cathepsin L1 [Tupaia chinensis]
          Length = 450

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/220 (49%), Positives = 136/220 (61%), Gaps = 14/220 (6%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TG+LE    +  GK ISLSEQ LVDC++   N
Sbjct: 240 KSVDWREKGFVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQNLVDCSRRQGN 299

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK NGGLD+EE+YPY G DG C++ +E        +V    G E  
Sbjct: 300 LGCQGGLMDNAFQYIKDNGGLDSEESYPYKGMDGTCQYKAEW-------AVANDTGFEKA 352

Query: 219 LQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED---GV 274
           L  AV  V P+SVA +     F+FYK G+Y    C +  +D  H V+ VGYGVE      
Sbjct: 353 LMKAVASVGPISVAIDAGHASFQFYKDGIYYEPDCSSENLD--HGVLVVGYGVEKRNSND 410

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YWLIKNSWGE WG +GY K+   + N CG+A+ ASYPVV
Sbjct: 411 KYWLIKNSWGEQWGANGYVKIAKDRNNHCGVASAASYPVV 450


>gi|91092022|ref|XP_970951.1| PREDICTED: similar to cathepsin l [Tribolium castaneum]
 gi|270001246|gb|EEZ97693.1| cathepsin L precursor [Tribolium castaneum]
          Length = 343

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/295 (38%), Positives = 160/295 (54%), Gaps = 38/295 (12%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFA-----TFSKNLDLIRSTNCKGLSYRL 105
           ++  + RH +  ARF + YG+   S  +    FA      F + L+    T    LS R+
Sbjct: 55  EIFIENRHKI--ARFNQEYGRGQWSFVQQLNNFADMLHHEFHRTLNGFNRT----LSARV 108

Query: 106 GLN------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
           G+                         ++PVK+QG C  CW FS  G+LE    +  G+ 
Sbjct: 109 GIPQSSTFIPSANVIFPDYVDWREVGAVTPVKNQGSCAGCWAFSAAGALEGHNFRKTGRL 168

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           + LS Q L+DC+  + N GC+GGL + A+EY++ N G+DTE++YPY  ++G C+F  E V
Sbjct: 169 VELSPQNLIDCSTNYGNDGCSGGLMNPAYEYVRTNPGIDTEDSYPYEARNGPCRFRPETV 228

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVN 260
           G      V+I  G E  L+ A+  + PVS A +     F+FY  G+Y   +CGN P DVN
Sbjct: 229 GAYCTGYVDIAEGDEQGLEAAIATLGPVSAAMDAGRQSFQFYSDGIYYDPQCGNRPDDVN 288

Query: 261 HAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           HAV+ VGYG E +G  YWL+KNS+G  WG  GY K+ +   N CGIA  ASYP+V
Sbjct: 289 HAVLVVGYGTEPNGQKYWLVKNSYGPQWGIGGYVKLAKDANNHCGIAIQASYPLV 343


>gi|15593246|gb|AAL02220.1|AF410880_1 cysteine protease CP7 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 136/218 (62%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++P+KDQG CGSCW+FS TGSLE          +SLSEQ LVDC+  F N
Sbjct: 118 KKVDWRSKGAVTPIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AFEY+K  GG+DTEE+YPYT +DG C + + N         ++   +E  
Sbjct: 178 EGCNGGLMDSAFEYVKSYGGIDTEESYPYTAEDGTCLYKAANNAGVNTGYKDVQAKSESA 237

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L+ AV  V PVSVA +  +  F+ Y SG+Y    C +  +D  H V+AVGYG E     +
Sbjct: 238 LRDAVEKVGPVSVAIDASNWSFQMYTSGIYYEPACSSDSLD--HGVLAVGYGSEWPNKEF 295

Query: 277 WLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           W++KNSWG +WG+ GY KM    KN CGIAT ASYP+V
Sbjct: 296 WIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 333


>gi|41152540|gb|AAR99519.1| cathepsin L protein [Fasciola hepatica]
          Length = 239

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 25  IDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNG 84

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A++Y+K   GL+TE +YPYT  +G C+++ +    +V     +  G+E EL+
Sbjct: 85  CSGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTGYYTVHSGSEVELK 143

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P ++A +V   F  Y+SG+Y S  C   P  +NHAV+AVGYG + G  YW++K
Sbjct: 144 NLVGSEGPAAIAVDVESDFMMYRSGIYQSQTC--LPFALNHAVLAVGYGTQGGTDYWIVK 201

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 202 NSWGLSWGERGYIRMARNRGNMCGIASLASLPMVA 236


>gi|167427527|gb|ABZ80400.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 130/206 (63%), Gaps = 4/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GCNGG    
Sbjct: 97  VTEVKDQGDCGSCWAFSTTGAVEGQYTKNQKANISFSEQQLVDCSGDYGNHGCNGGFMEN 156

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY++   GL+TE +YPY  ++G CK+ S    V+V        G E +L H VG   P
Sbjct: 157 AYEYLERR-GLETESSYPYKAEEGPCKYDSRLGVVEVFGYFIEHSGIESKLAHLVGDKGP 215

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
            +VA +V   F  Y+ G+Y+S  C +  +  NH ++ VGYG +DG  YW++KNSWG  WG
Sbjct: 216 AAVAVDVESDFLMYRGGIYASRNCSSESL--NHGILVVGYGTQDGTDYWIVKNSWGSLWG 273

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
           DHGY +M   + NMCGIA+ AS PVV
Sbjct: 274 DHGYIRMARNRDNMCGIASAASVPVV 299


>gi|157862759|gb|ABV90502.1| cathepsin L, partial [Fasciola gigantica]
          Length = 280

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 66  IDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNQRTSISFSEQQLVDCSGPWGNMG 125

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   A+EY+K   GL+TE +YPY   +G C+++ +   V+V     +  G+E  L+
Sbjct: 126 CSGGLMENAYEYLK-QFGLETESSYPYRAVEGQCRYNRQLGVVKVTGYYTVHSGSEVGLK 184

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y+SG+Y S  C  +P  +NHAV+AVGYG + G  YW++K
Sbjct: 185 NLVGAEGPAAVAVDVESDFMMYRSGIYQSQTC--SPFGLNHAVLAVGYGTQGGTDYWIVK 242

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 243 NSWGSSWGERGYIRMVRNRGNMCGIASMASLPMVA 277


>gi|341878328|gb|EGT34263.1| CBN-CPL-1 protein [Caenorhabditis brenneri]
          Length = 336

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +  G+ +SLSEQ LVDC+  + N GCNGGL  Q
Sbjct: 131 VTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQ 190

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI+ N G+DTEE+YPY G+D  C F+ + +G      V+   G E++L+ AV    P
Sbjct: 191 AFEYIRDNHGVDTEESYPYKGRDMKCHFNKKTIGADDKGYVDTPEGDEEQLKIAVATQGP 250

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWL+KNSWG  
Sbjct: 251 ISIAIDAGHRSFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEHGDYWLVKNSWGTG 308

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 309 WGEKGYIRIARNRNNHCGVATKASYPLV 336


>gi|348531521|ref|XP_003453257.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 333

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/282 (38%), Positives = 160/282 (56%), Gaps = 14/282 (4%)

Query: 36  LVSSDGLRDFETSVLQVIGQARHALSFARFARR--YGKIYESVEEMKLRFATFSKNLDLI 93
           +++  GL+ +   + Q          + R   R   G    S+      F    +  DL 
Sbjct: 62  ILADQGLKSYRLGMTQFADMENE--EYKRLVSRGCLGSFNTSLHHRGSTFLRLPEGTDLP 119

Query: 94  RSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 153
            + + +   Y     ++ V++Q  CGSCW FS  G+LE    +  GK +SLS+QQLVDC+
Sbjct: 120 DTVDWRDKGY-----VTDVQNQMQCGSCWAFSAIGALEGQNFRKTGKLVSLSKQQLVDCS 174

Query: 154 QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITL 213
           Q+F N GCNGG    AF+YI+  GG+DTE +YPY  ++G C ++ E VG      V+++ 
Sbjct: 175 QSFGNHGCNGGWMDWAFKYIQATGGIDTEASYPYEAEEGNCHYNPETVGATCTGYVDVSP 234

Query: 214 GAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 272
             ED L+ AV  + P+S+A +   + F+FY+SGVY    C  +    +HA++AVGYG E+
Sbjct: 235 N-EDALKEAVATIGPISIAMDASHESFQFYQSGVYDEPSCITSRF--SHAMLAVGYGTEN 291

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  YWL+KNS+G  WG+ GY KM   K N CGIA+ ASYP+V
Sbjct: 292 GHDYWLVKNSFGLGWGEKGYIKMSRNKSNQCGIASKASYPLV 333


>gi|33520126|gb|AAQ21040.1| cathepsin L precursor [Branchiostoma belcheri tsingtauense]
          Length = 327

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/216 (46%), Positives = 132/216 (61%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+Q  CGSCW FSTTGSLE  +    G  +SLSEQ LVDC++   N+G
Sbjct: 114 VDWRQKGAVTKVKNQEQCGSCWAFSTTGSLEGQHFLKSGTLVSLSEQNLVDCSRKEGNKG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           C GGL  QAF+YIK NGG+DTEE YPY G+D   C++ +   G  +   V++  G ED L
Sbjct: 174 CKGGLMDQAFKYIKTNGGIDTEECYPYKGRDERKCEYKASCSGATLSSFVDVKTGDEDAL 233

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + A   + P+SV  +     F+ Y  GVY   +C +  +D  H V+ VGYG +    YWL
Sbjct: 234 KQASATIGPISVGIDASHPSFQLYDHGVYHEKRCSSKKLD--HGVLVVGYGTQSTKDYWL 291

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG +WG  GY  M   K N CGIAT ASYPVV
Sbjct: 292 VKNSWGADWGMEGYIMMSRNKDNQCGIATQASYPVV 327


>gi|156124996|gb|ABU50816.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/207 (47%), Positives = 128/207 (61%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+K+Q  CGSCW FS   S+E  +    GK +SLSEQ LVDC+ A  + GC+GG    
Sbjct: 133 VTPIKNQQQCGSCWAFSAVASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGWMDY 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+  N G+DTE +YPY   D  C+F   ++G  +   V++  G E  LQ+AV  + P
Sbjct: 193 AFKYVIQNRGIDTEASYPYKAIDESCEFKRNSIGATIHSFVDVKTGDESALQNAVASIGP 252

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FY SGVY+   C    +D  H V AVGYG  +GVPYW +KNSWG +W
Sbjct: 253 ISVAIDASQPSFQFYSSGVYNEPDCSTEILD--HGVTAVGYGTLNGVPYWKVKNSWGTSW 310

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIAT ASYPVV
Sbjct: 311 GQKGYIFMSRNKQNQCGIATKASYPVV 337


>gi|313213752|emb|CBY40632.1| unnamed protein product [Oikopleura dioica]
          Length = 440

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/205 (50%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FST  SLE+ +  A     SLSEQQLVDC+  + N GC+GGL +Q
Sbjct: 236 VTPVKDQGQCGSCWAFSTIASLESQWALAGNALTSLSEQQLVDCSMNWGNYGCSGGLMTQ 295

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
            F YI  N G+DTE +YPYT +DG C F+  NVG  +    NI  G E  L +AV +V P
Sbjct: 296 GFTYIHDNNGVDTEASYPYTAQDGKCVFNPANVGTSLTSCYNIASGDEAALANAVQMVGP 355

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y SGVY    C +  +D  H V AVGYG   G  ++++KNSW   W
Sbjct: 356 MSVAIDASHMSFQLYTSGVYYEPNCSSQFLD--HGVTAVGYGSSSGNDFFIVKNSWAATW 413

Query: 288 GDHGYFKMEMGK-NMCGIATCASYP 311
           GD+GY  M   K N CGIAT ASYP
Sbjct: 414 GDNGYIMMSRNKNNNCGIATSASYP 438


>gi|426219875|ref|XP_004004143.1| PREDICTED: cathepsin L1 [Ovis aries]
          Length = 333

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/277 (41%), Positives = 161/277 (58%), Gaps = 21/277 (7%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKN--------LDLIRSTNCKGLS 102
           Q   Q +H+ S A  A  +G +  + EE +     F +          + I ++    + 
Sbjct: 64  QEYSQGKHSFSMAMNA--FGDL--TSEEFRQMMNGFQRQENKKGKVFHETIFASIPPSVD 119

Query: 103 YRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCN 162
           +R    ++PVK+QG CGSCW FSTTG+LE    +  GK +SLSEQ LVDC+Q   N+GC+
Sbjct: 120 WREKGYVTPVKNQGKCGSCWAFSTTGALEGQMFRKTGKLVSLSEQNLVDCSQPEGNRGCH 179

Query: 163 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHA 222
           GGL   AF+Y+   GGLD+EE+YPYTG  G C ++ +N        V++    E+ L  A
Sbjct: 180 GGLMDNAFQYVLDVGGLDSEESYPYTGLVGTCNYNPKNSAANETGFVDLP-KQENALMKA 238

Query: 223 VGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYW 277
           V  + P+SVA +  +  F+FYKSG+Y   KC +  +D  H V+ VGYG E    D   YW
Sbjct: 239 VATLGPISVAVDASNPSFQFYKSGIYYEPKCKSESVD--HGVLVVGYGFEGADSDDNKYW 296

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG++WG +GY KM   + N CGIAT ASYP V
Sbjct: 297 LVKNSWGKHWGINGYIKMAKDQNNHCGIATMASYPTV 333


>gi|313246319|emb|CBY35240.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/205 (50%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FST  SLE+ +  A     SLSEQQLVDC+  + N GC+GGL +Q
Sbjct: 122 VTPVKDQGQCGSCWAFSTIASLESQWALAGNALTSLSEQQLVDCSMNWGNYGCSGGLMTQ 181

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
            F YI  N G+DTE +YPYT +DG C F+  NVG  +    NI  G E  L +AV +V P
Sbjct: 182 GFTYIHDNNGVDTEASYPYTAQDGKCVFNPANVGTSLTSCYNIASGDEAALANAVQMVGP 241

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y SGVY    C +  +D  H V AVGYG   G  ++++KNSW   W
Sbjct: 242 MSVAIDASHMSFQLYTSGVYYEPNCSSQFLD--HGVTAVGYGSSSGNDFFIVKNSWAATW 299

Query: 288 GDHGYFKMEMGK-NMCGIATCASYP 311
           GD+GY  M   K N CGIAT ASYP
Sbjct: 300 GDNGYIMMSRNKNNNCGIATSASYP 324


>gi|327285051|ref|XP_003227248.1| PREDICTED: counting factor associated protein D-like [Anolis
           carolinensis]
          Length = 547

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 162/304 (53%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  + +R+GK Y+  +EM+ R  TF+ N+  + S N   L ++L LN             
Sbjct: 244 FHHYRKRFGKSYDDEKEMEHRKHTFTHNMRFVHSKNRANLPFKLALNHLADLTQDEMAAM 303

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+FS+TG+LE 
Sbjct: 304 RGKLKSTKPNNGLPFPHEQFVGLILPESLDWRLYGAVTPVKDQAVCGSCWSFSSTGALEG 363

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           +     G+ I LS+Q L+DC+  F N  C+GG   QAFE++  +GG+ + E+Y PY G++
Sbjct: 364 SLFLKTGQLIPLSQQILIDCSWGFGNYACDGGEEWQAFEWVLKHGGIASTESYGPYKGQN 423

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSST 250
           G C  +  ++  ++   VN+T G    L+ A+    PVSV+ +     F FY +GVY   
Sbjct: 424 GYCHSNKTHLVGKLSGYVNVTSGNITALKAAIYKHGPVSVSIDASHRTFSFYSNGVYYEP 483

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           KCGN   +++HAV+AVGYGV  G  YWL+KNSW   WG+ GY  M M  N CG+AT A+Y
Sbjct: 484 KCGNKKGELDHAVLAVGYGVLQGELYWLVKNSWSTYWGNDGYILMSMKDNNCGVATDATY 543

Query: 311 PVVA 314
           P++A
Sbjct: 544 PLMA 547


>gi|156938919|gb|ABU97481.1| cathepsin L-like cysteine protease [Tyrophagus putrescentiae]
          Length = 333

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/324 (36%), Positives = 155/324 (47%), Gaps = 57/324 (17%)

Query: 45  FETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRS--------- 95
           F  +  ++I +      F  F  R+G+ Y + EE   R   F+ NL+ I +         
Sbjct: 12  FAPTASELISEGELEAHFNLFKTRFGRSYANFEEEIFRKRVFASNLEFIFNHNREFFAGN 71

Query: 96  ----------TNCKGLSYRLGLN---------------------------------ISPV 112
                     T+     +R   N                                 ++P+
Sbjct: 72  KNFNVAVNNFTDMSNTEFRARFNGLRHSGVQSAPAIHSASAEGLPATVDWTKVKNVVTPI 131

Query: 113 KDQGHCGSCWTF-STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFE 171
           K+Q  CGSCW F S   S+E  +    GK +SLSEQ LVDC+ A  N GC GGL  QAF+
Sbjct: 132 KNQEQCGSCWAFFSAVASMEGQHGLKTGKLVSLSEQNLVDCSAAEGNMGCEGGLMDQAFQ 191

Query: 172 YIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSV 231
           Y+  N G+DTE +YPY   D   +F   +VG  +   V++  G+E  LQ AV  V P+SV
Sbjct: 192 YVIANKGIDTEMSYPYKAIDESWEFKKNSVGATIKSYVDVKTGSESSLQSAVATVGPISV 251

Query: 232 AFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDH 290
             +     F+FY SGVY    C  T +D  H V AVGYG  +G PYW +KNSWG +WG  
Sbjct: 252 GIDASQLSFQFYSSGVYEEPACSTTILD--HGVTAVGYGALNGTPYWKVKNSWGTSWGMS 309

Query: 291 GYFKMEMGK-NMCGIATCASYPVV 313
           GY  M   K N CGIAT AS+PVV
Sbjct: 310 GYIFMSRNKQNQCGIATAASWPVV 333


>gi|108735840|gb|ABG00259.1| cathepsin L2 [Fasciola hepatica]
          Length = 219

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/207 (46%), Positives = 131/207 (63%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTG++E  + +      S SEQQLVDC + F N GC GG    
Sbjct: 13  VTEVKDQGQCGSCWAFSTTGAVEGQFRKNERASASFSEQQLVDCTRDFGNYGCGGGYMEN 72

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY+K+N GL+TE  YPY   +G C++       +V     +  G E EL++ VG   P
Sbjct: 73  AYEYLKHN-GLETESYYPYQAVEGPCQYDGRLAYAKVTGYYTVHSGDEIELKNLVGTEGP 131

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
            ++A +V   F  Y+SG+Y S  C   P  +NHAV+AVGYG +DG  YW++KNSWG +WG
Sbjct: 132 AAIAVDVESDFMMYRSGIYQSQTC--LPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWG 189

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVVA 314
           + GY +M   + NMCGIA+ AS P+VA
Sbjct: 190 ERGYIRMARNRGNMCGIASLASLPMVA 216


>gi|431897851|gb|ELK06685.1| Cathepsin L1 [Pteropus alecto]
          Length = 331

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/219 (47%), Positives = 136/219 (62%), Gaps = 9/219 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FS TG+LE    +  GK ISLSEQ LVDC+Q+  N+G
Sbjct: 116 VDWRQKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQNLVDCSQSQGNEG 175

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   AF+Y+K NGGLD+EE+YPY  +D  CK+  E         V+I    E  L 
Sbjct: 176 CDGGLMDNAFQYVKDNGGLDSEESYPYLARDESCKYKPEFSAANDSGFVDIH-KQERSLM 234

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVP 275
            AV  V P+SV  +     F+FY+ G+Y   +C +   D+NH V+ VGYG E    +   
Sbjct: 235 KAVASVGPISVGIDASYSSFQFYEKGIYYEPECSSE--DLNHGVLVVGYGFERAESNKNK 292

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           YW++KNSWG NWG +GY  M   + N CGIAT ASYP+V
Sbjct: 293 YWIVKNSWGTNWGMNGYINMAKDQNNHCGIATAASYPIV 331


>gi|294938848|ref|XP_002782226.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239893730|gb|EER14021.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 334

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 158/315 (50%), Gaps = 71/315 (22%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L+F  F  ++GK YES EE   R A F  +L  I   N K LSY+LG+N           
Sbjct: 26  LAFMGFQHKFGKNYESKEEEIKRNAIFRAHLHYIEQVNAKNLSYKLGVNEHADLTHEEFA 85

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++P+KDQG CGSCW FS TG+L
Sbjct: 86  ALKLGTSSKMSMKRDDKLVVKADTTQLLTSVDWRSKGVLTPIKDQGPCGSCWAFSATGAL 145

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           EA Y  A GK +SLSEQQL+DC+ ++ N+GC+GGL   A+ YIK + GLD E  YPY  K
Sbjct: 146 EAQYAIATGKLLSLSEQQLIDCSSSYGNEGCSGGLMENAYTYIK-SAGLDQESTYPYIAK 204

Query: 191 DGVCKFSSEN----------VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GF 239
           +  C+ S E            G  +LD        E  L  A+    PVS+A    D  F
Sbjct: 205 NNACQVSLEKRSDGIPAGEVTGFHMLDQT------EQGLMKALADA-PVSIAMYASDPDF 257

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK 299
           RFY+SGVYSS  C  T   ++H VVAVGYG E+G  Y++I+NSWG +WG  GYF ++ G 
Sbjct: 258 RFYQSGVYSSKTCHGT---IDHGVVAVGYGTENGEDYFVIRNSWGSSWGQDGYFYLKRGV 314

Query: 300 NMCGIATCASYPVVA 314
           +  G      Y  VA
Sbjct: 315 SGYGECNILEYMCVA 329


>gi|110349473|gb|ABG73217.1| cathepsin L 1 precursor [Diaprepes abbreviatus]
          Length = 322

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 164/307 (53%), Gaps = 60/307 (19%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN------- 108
           + F  F  ++GK Y++  E   RF  F  NL  I   N    +GL SY+ G+N       
Sbjct: 23  VKFQAFKLKHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQ 82

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++ VKDQG+CGSCW FS TG
Sbjct: 83  EEFRAFLTLSSSKKPHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGSCWAFSVTG 142

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           S EAAY++  GK +SLSEQQLVDC+   N  GCNGG   + F Y+K + GL+ E  YPY 
Sbjct: 143 STEAAYYRKAGKLVSLSEQQLVDCSTDIN-AGCNGGYLDETFTYVK-SKGLEAESTYPYK 200

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDE--LQHAVGLVRPVSVAFEVVDGFRFYKSGV 246
           G DG CK+S+  V  +V  S + +L +EDE  L  AVG V PVSVA +       Y+SG+
Sbjct: 201 GTDGSCKYSASKVVTKV--SGHKSLKSEDENALLDAVGNVGPVSVAIDATY-LSSYESGI 257

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT 306
           Y    C  +P ++NH V+ VGYG  +G  YW++KNSWG ++G+ GYF++  GKN CG+A 
Sbjct: 258 YEDDWC--SPSELNHGVLVVGYGTSNGKKYWIVKNSWGGSFGESGYFRLLRGKNECGVAE 315

Query: 307 CASYPVV 313
              YP++
Sbjct: 316 DTVYPII 322


>gi|291383486|ref|XP_002708337.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/211 (47%), Positives = 130/211 (61%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE    +  G+ +SLSEQ L+DC+    N GC GGLP  
Sbjct: 126 VTPVKNQGRCGSCWAFSATGALEGQMFRKTGRLVSLSEQNLIDCSWPAGNYGCRGGLPDH 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+K NGGLD+E++YPY  +DG+C++S +         V I    E+ L  AV  V P
Sbjct: 186 AFQYVKDNGGLDSEDSYPYEARDGLCRYSPQESVANDTGFVQIPE-QEEALMEAVATVGP 244

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW 283
           ++VA +     F FYK G+Y    C    +D  HAV+ VGYG E    D   YWL+KNSW
Sbjct: 245 IAVAIDASHSSFLFYKEGIYYEPNCSRENLD--HAVLVVGYGFEGAESDNQKYWLVKNSW 302

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ WG  GY KM   + N CGIAT ASYP V
Sbjct: 303 GKGWGMDGYMKMAKDRNNHCGIATAASYPTV 333


>gi|198432215|ref|XP_002130162.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 331

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 133/218 (61%), Gaps = 5/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQ  CGSCW FSTTGSLE  + +  GK +SLSEQ LVDC+    N
Sbjct: 116 KNVDWRKEGYVTPVKDQKQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSMKEGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITLGAED 217
            GC GGL    FEYI  NGG+DTE +YPY  K +  C +   N G  +   V+I  G+E 
Sbjct: 176 HGCQGGLMDLGFEYIFDNGGIDTESSYPYMAKNEPQCMYKRSNSGATLTGCVDIKRGSES 235

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            L  AV  V P+SVA +     F+ YKSGVY    C +  +D  H V+AVG+G ++G  +
Sbjct: 236 ALMKAVADVGPISVAIDAGHKSFQMYKSGVYYEPSCSSVKLD--HGVLAVGFGADNGEDF 293

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WG  GY  M   + N CGIAT ASYP+V
Sbjct: 294 WLVKNSWGPIWGMEGYIMMSRNRDNNCGIATQASYPLV 331


>gi|7271891|gb|AAF44676.1|AF239265_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG++E  Y +     IS SEQQLVDC+  F N G
Sbjct: 112 IDWRESGYVTEVKDQGQCGSCWAFSTTGAMEGQYMKNQRTSISFSEQQLVDCSDDFGNFG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   A EY+K   GL+TE +YPY   +G C+++ +    +V     +  G E ELQ
Sbjct: 172 CNGGLMENACEYLK-RFGLETESSYPYRAVEGPCRYNKQLGVAKVTGYYMVHSGDEVELQ 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG+  P +VA +V   F  Y+SG+Y S  C  +P  +NH V+AVGYG + G  YW++K
Sbjct: 231 NLVGIEGPAAVALDVDSDFMMYRSGIYQSQTC--SPEFLNHGVLAVGYGTQSGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG  WG++GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGPWWGENGYIRMVRNRGNMCGIASLASVPMVA 323


>gi|209738038|gb|ACI69888.1| Digestive cysteine proteinase 2 precursor [Salmo salar]
          Length = 367

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 12/212 (5%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           +SPVKDQG+CGSCW+FSTTG++E+ Y   +GK    SEQQLVDC +   +QGCNGG P  
Sbjct: 130 VSPVKDQGNCGSCWSFSTTGAMESQYRLKYGKMKLFSEQQLVDCDRQNIDQGCNGGFPVA 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT-----LGAEDELQHAV 223
           AFEYI+   GL TEE YPY+     C+F  +  G   L+S  +T        E+ L  A+
Sbjct: 190 AFEYIR-EFGLLTEEEYPYSAHSNQCRFKPDENG--HLNSTKVTGYTVIEMNENALTEAI 246

Query: 224 GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED--GVPYWLIK 280
               P+SVA +     F+FY SGVY +  CG+   +++HAV+AVG+GV+     PY+++K
Sbjct: 247 YKRGPISVAIDASSSDFQFYHSGVYQNPSCGSAVSELDHAVLAVGFGVDKVHKTPYYIVK 306

Query: 281 NSWGENWGDHGYFKM-EMGKNMCGIATCASYP 311
           NSW   WGDHGY KM   GKN CGIAT A+YP
Sbjct: 307 NSWSSGWGDHGYIKMIRNGKNNCGIATFATYP 338


>gi|392922426|ref|NP_001256718.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
 gi|3879367|emb|CAB07275.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
          Length = 337

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +  G+ +SLSEQ LVDC+  + N GCNGGL  Q
Sbjct: 132 VTDVKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQ 191

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYI+ N G+DTEE+YPY G+D  C F+ + VG      V+   G E++L+ AV    P
Sbjct: 192 AFEYIRDNHGVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGP 251

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YW++KNSWG  
Sbjct: 252 ISIAIDAGHRSFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEHGDYWIVKNSWGAG 309

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 310 WGEKGYIRIARNRNNHCGVATKASYPLV 337


>gi|157862755|gb|ABV90500.1| cathepsin L, partial [Fasciola gigantica]
          Length = 251

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 138/214 (64%), Gaps = 4/214 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTG++E  Y ++    IS SEQQLVDC+  F N G
Sbjct: 37  IDWRESGYVTEVKDQGGCGSCWAFSTTGAMEGQYMKSQRINISFSEQQLVDCSGDFGNHG 96

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL  +A+EY+++  GL+TE +YPY   +G C++  +    Q+ D   +    E  L+
Sbjct: 97  CSGGLMEKAYEYLRHF-GLETESSYPYRADEGPCQYDKQLGVAQLSDYYIVHSQDEVALK 155

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + +G+  P +VA +V   F  YKSG+Y    C +  +  NHA++AVGYG EDG  YW++K
Sbjct: 156 NLIGVEGPAAVALDVNIDFMMYKSGIYQDEICSSRYL--NHALLAVGYGTEDGTEYWIVK 213

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG  WG+HGY ++   + NMCGIAT AS P+V
Sbjct: 214 NSWGSRWGEHGYIRLARNRDNMCGIATLASLPIV 247


>gi|116563690|gb|ABJ99858.1| cathepsin L [Hippoglossus hippoglossus]
          Length = 336

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 134/212 (63%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FSTTG+LE    +  GK +SLSEQ LVDC++   N+GC GGL  Q
Sbjct: 127 VTPVKDQGQCGSCWAFSTTGALEGQQFRKTGKLVSLSEQNLVDCSRPEGNEGCGGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+  N GLD+E++YPYTG D   C +            V++  G E  L  AV  V 
Sbjct: 187 AFQYVTDNQGLDSEDSYPYTGTDDQPCHYDPLYNSANDTGFVDVPSGKEHALMKAVASVG 246

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +   + F+FY+SG+Y   +C +  +D  H V+AVGYG E     G  +W++KNS
Sbjct: 247 PVSVAIDAGHESFQFYQSGIYYEKECSSEELD--HGVLAVGYGFEGEDKMGKKFWIVKNS 304

Query: 283 WGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WGE WGD GY  M    KN CGIAT ASYP+V
Sbjct: 305 WGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|395819351|ref|XP_003783057.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/221 (49%), Positives = 136/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TG+LE    +  GK ISLSEQ LVDC++   N
Sbjct: 116 KSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQNLVDCSRPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GC+GGL   AF+YIK NGGLD+EE+YPY   D  CK+  E         V+I    E  
Sbjct: 176 EGCDGGLMDYAFQYIKENGGLDSEESYPYDAMDESCKYRPEYSVANDTGFVDIP-KEEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F+FYK GVY   +C +   +V+H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFQFYKEGVYFEPECSSD--NVDHGVLVVGYGYEETESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             +WL+KNSWGE WG  GY KM    KN CGIAT ASYP V
Sbjct: 293 NKFWLVKNSWGEEWGLGGYIKMTKDQKNHCGIATAASYPTV 333


>gi|440893559|gb|ELR46281.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 330

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/274 (42%), Positives = 156/274 (56%), Gaps = 18/274 (6%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATF-----SKNLDLIRSTNCKGLSYRL 105
           Q   Q +H+ S A  A  +G +  + EE +     F      K  + I ++    + +R 
Sbjct: 64  QEYSQGKHSFSMAMNA--FGDM--TNEEFRHTMNGFQRQKNKKGKETIFASIPPSMDWRE 119

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVK+QG CGSCW FS TG+LE    Q  GK +SLSEQ LVDC+Q   N+GC+GG 
Sbjct: 120 KGYVTPVKNQGKCGSCWAFSATGALEGQMFQKTGKLVSLSEQNLVDCSQPEGNRGCHGGF 179

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
              AF+Y+   GGLD+EE+YPYTG  G C ++  N        V++    E  L  AV  
Sbjct: 180 IDNAFQYVLDVGGLDSEESYPYTGLVGTCLYNPNNSAANETGFVDLP-KQEKALMKAVAT 238

Query: 226 VRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIK 280
           + P+SVA +  +  F+FYKSG+Y    C +  +D  HAV+ VGYG E    D   YWL+K
Sbjct: 239 LGPISVAVDAHNPSFQFYKSGIYYEPNCSSESVD--HAVLVVGYGFEGADSDDNKYWLVK 296

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWGE+WG  GY KM   + N CGIAT ASYP V
Sbjct: 297 NSWGEHWGMDGYIKMAKDRNNHCGIATMASYPTV 330


>gi|119433808|gb|ABL74967.1| cysteine protease [Acanthamoeba castellanii]
          Length = 330

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/305 (38%), Positives = 157/305 (51%), Gaps = 57/305 (18%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           FA + R + K Y S EE   R+  + +N + I+  N K  SY L +N             
Sbjct: 30  FADWMRTHTKSY-SNEEFVFRWNVWRENYNFIQEENRKNNSYYLTMNKFGDLTNAEFNKV 88

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++ VK+QG CGSCW+FSTTGS 
Sbjct: 89  YKGLAFDYSAHILKAKAATPAAPAPGLPANFDWRQKGAVTHVKNQGQCGSCWSFSTTGST 148

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E A     G  +SLSEQ L+DC+ ++ N GCNGGL   AFEYI  N G+DTE +YPY   
Sbjct: 149 EGANFLKRGTLVSLSEQNLIDCSGSYGNNGCNGGLMDYAFEYIINNKGIDTEASYPYETA 208

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
              C+++  N G  +    +++ G E+ L +AV  + P SVA +   + F+FY  GVY  
Sbjct: 209 QYNCRYNPANSGGSLTSYTDVSSGDENALLNAVA-IEPTSVAIDASHNSFQFYSGGVYYE 267

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
           + C +T +D  H V+AVG+G E+G  YWL+KNSWG +WG  GY KM   + N CGIAT A
Sbjct: 268 SSCSSTQLD--HGVLAVGWGTENGQDYWLVKNSWGADWGLQGYIKMARNRHNNCGIATAA 325

Query: 309 SYPVV 313
           SYP  
Sbjct: 326 SYPTA 330


>gi|156124998|gb|ABU50817.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/207 (47%), Positives = 127/207 (61%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++P+K+Q  CGSCW FS   S+E  +    GK +SLSEQ LVDC+ A  + GC+GG    
Sbjct: 133 VTPIKNQQQCGSCWAFSAVASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGWMDY 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+  N G+DTE +YPY   D  C+F   +VG  +   V++  G E  LQ+AV  + P
Sbjct: 193 AFKYVIQNRGIDTEASYPYKAIDESCEFKRNSVGATIHSFVDVKTGDESALQNAVASIGP 252

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+FY SGVY+   C    +D  H V AVGYG  +G PYW +KNSWG +W
Sbjct: 253 ISVAIDAAQPSFQFYSSGVYNEPDCSTEILD--HGVTAVGYGTLNGAPYWKVKNSWGTSW 310

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY  M   K N CGIAT ASYPVV
Sbjct: 311 GRKGYIFMSRNKQNQCGIATKASYPVV 337


>gi|293342577|ref|XP_001065834.2| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|293354413|ref|XP_573976.3| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|149039745|gb|EDL93861.1| rCG24317, isoform CRA_a [Rattus norvegicus]
          Length = 330

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 141/218 (64%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS  GSLE    +  GK + LSEQ LVDC+ +  N
Sbjct: 116 KTVDWRKHGYVTPVKNQGPCGSCWAFSAVGSLEGQVFRKTGKLVPLSEQNLVDCSWSHGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GC+GGLP  AF+Y+K NGGLDT  +YPY   +G C+++ +    +V+  ++I   +E+ 
Sbjct: 176 KGCDGGLPDFAFQYVKDNGGLDTSVSYPYEALNGTCRYNPKYSAAKVVGFMSIP-PSENA 234

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L  AV  V P+SV  ++    F+FYK G+Y    C +T  ++NHAV+ VGYG E DG  Y
Sbjct: 235 LMKAVATVGPISVGIDIKHKSFQFYKGGMYYEPDCSST--NLNHAVLVVGYGEESDGRKY 292

Query: 277 WLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WL+KNSWG +WG  GY KM     N CGIA+ ASYP+V
Sbjct: 293 WLVKNSWGRDWGMDGYIKMAKDWNNNCGIASDASYPIV 330


>gi|388890776|gb|AFK80364.1| cysteine proteinase 3, partial [Acanthamoeba castellanii]
          Length = 329

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 133/215 (61%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
             +R    ++ VK+QG CGSCW+FSTTGS E A     G+  SLSEQ L+DC+ ++ N G
Sbjct: 118 FDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKTGRLTSLSEQNLIDCSGSYGNNG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AFEYI  N G+DTE +YPY      C+++  N G  +    +++ G E+ L 
Sbjct: 178 CNGGLMDYAFEYIINNKGIDTEASYPYQTAQYTCQYNPANSGGSLTSYTDVSSGDENALL 237

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           +AV    P SVA +   + F+FY  GVY  + C +T +D  H V+AVG+G EDG  YWL+
Sbjct: 238 NAVA-TEPTSVAIDASHNSFQFYSGGVYYESACSSTQLD--HGVLAVGWGTEDGQDYWLV 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG +WG  GY KM   + N CGIAT ASYP  
Sbjct: 295 KNSWGADWGLAGYIKMARNRSNNCGIATSASYPTA 329


>gi|348531513|ref|XP_003453253.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 333

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 97/207 (46%), Positives = 137/207 (66%), Gaps = 5/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+Q  CGSCW FS TG+LE  + +  G+ + LSEQQLVDC++ F N+GC+GG  + 
Sbjct: 130 VTKVKNQQQCGSCWAFSATGALEGQHFKKTGRLVYLSEQQLVDCSRNFGNRGCDGGWMNN 189

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK NGG+ TE +YPY   DG+C ++  +VG      V+++   E+ L+ AV  + P
Sbjct: 190 AFKYIKDNGGIQTEASYPYQAMDGLCHYNPNSVGAICNGYVDVS-PDEEALKEAVATIGP 248

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +S+A +   + F+ Y+SGVY   +C +  +  +H ++ VGYG E G+ YWLIKNSWG  W
Sbjct: 249 ISIAMDASHESFQLYQSGVYDEHRCNDYYL--SHGMLVVGYGTEGGLDYWLIKNSWGLGW 306

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY KM   K N CGIAT ASYP+V
Sbjct: 307 GKMGYIKMVRNKRNQCGIATAASYPLV 333


>gi|356984263|gb|AET43955.1| cathepsin L2, partial [Reishia clavigera]
          Length = 278

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/281 (40%), Positives = 147/281 (52%), Gaps = 57/281 (20%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN------------ 108
           F + Y K+Y S E+  +R   + +NL  I   N    +GL +YRLG+N            
Sbjct: 1   FKKTYNKLY-SAEDESIRRMIWERNLKKIEEHNLEADRGLHTYRLGMNPLGDLTAKDFSW 59

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVK+Q  CGSCW FS TGSLE
Sbjct: 60  MLNGYKMSANRTAGATYLPPSNVGDLPSEVDWRTKGYVTPVKNQKQCGSCWAFSATGSLE 119

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
             + +  G  +SLSEQ LVDC++   N+GC GGL  QAFEYIK N G+DTE++YPY   D
Sbjct: 120 GQHFKKTGTLVSLSEQNLVDCSKKEGNEGCEGGLMDQAFEYIKRNKGIDTEQSYPYRAVD 179

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
             C+FS  +VG       +I  G+E +LQ AV  V P+SVA +   D F+ YKSGVY   
Sbjct: 180 EKCRFSRADVGATDTGYTDIHKGSEKDLQSAVATVGPISVAIDASRDSFQLYKSGVYYEP 239

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHG 291
           KC +T +D  H V+AVGYG  D   YW++KNSWG  WG  G
Sbjct: 240 KCSSTMLD--HGVLAVGYGTTDSKDYWIVKNSWGTQWGMKG 278


>gi|7271895|gb|AAF44678.1|AF239267_1 cathepsin L, partial [Fasciola gigantica]
          Length = 219

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 138/215 (64%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 5   IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYG 64

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPYT  +  C+++ +    +V D   +  G+E EL+
Sbjct: 65  CMGGLMENAYEYLK-QFGLETESSYPYTAVEDQCRYNRQLGVAKVTDYYTVHSGSEVELK 123

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y  G+Y S  C  + + VNHAV+AVGYG + G  YW++K
Sbjct: 124 NLVGAEGPAAVAVDVESDFMMYSGGIYQSRTC--SSLRVNHAVLAVGYGTQGGTDYWIVK 181

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 182 NSWGSSWGERGYIRMVRNRGNMCGIASLASLPMVA 216


>gi|211953221|gb|ACJ13772.1| aleurain-like protease [Helianthus petiolaris]
 gi|211953223|gb|ACJ13773.1| aleurain-like protease [Helianthus petiolaris]
          Length = 114

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 91/112 (81%), Positives = 101/112 (90%)

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           VQVLDSVNIT GAEDEL+HAVG+VRPVSVAFEV+  FR Y  GV++S  CG+ PMDVNHA
Sbjct: 3   VQVLDSVNITSGAEDELKHAVGVVRPVSVAFEVIANFRLYTGGVFTSDDCGSGPMDVNHA 62

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VVAVGYGVEDGVPYWLIKNSWG +WG +GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 63  VVAVGYGVEDGVPYWLIKNSWGADWGLNGYFKMEMGKNMCGVATCASYPIVA 114


>gi|195729975|gb|ACG50798.1| cathepsin L1 [Fascioloides magna]
          Length = 327

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/206 (48%), Positives = 130/206 (63%), Gaps = 4/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FS+TG++E  Y + F   +S SEQQLVDC + + N GCNGG   +
Sbjct: 121 VTEVKDQGQCGSCWAFSSTGAMEGQYIKKFRTTVSFSEQQLVDCTRNYGNSGCNGGWMER 180

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEY++ N GL+TE +YPY   D  C++ S+    +V        G E  L + VG   P
Sbjct: 181 AFEYLRRN-GLETESSYPYRAVDDHCRYESQLGVAKVTGYYTEHSGNEVSLMNMVGGEGP 239

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           V+VA +V   F  YKSG+Y S  C  +   VNHAV+AVGYG E G  YW++KNSWG  WG
Sbjct: 240 VAVAVDVQSDFSMYKSGIYQSETC--STYYVNHAVLAVGYGTESGTDYWILKNSWGSWWG 297

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
           D GY +    + NMCGIA+ AS P+V
Sbjct: 298 DQGYIRFARNRNNMCGIASYASVPMV 323


>gi|19909509|dbj|BAB86959.1| cathepsin L [Fasciola gigantica]
          Length = 324

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/207 (46%), Positives = 136/207 (65%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N GC+GGL   
Sbjct: 120 VTTVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYGCSGGLMEN 179

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL++ VG   P
Sbjct: 180 AYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGP 238

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
            ++A +V   F  Y  G+Y S  C    + +NHAV+AVGYG + G  YW++KNSWG +WG
Sbjct: 239 AAIAVDVESDFMMYSGGIYQSQTC----LRLNHAVLAVGYGTQGGTDYWIVKNSWGLSWG 294

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVVA 314
           + GY +M   + NMCGI++ AS P+VA
Sbjct: 295 ERGYIRMARNRGNMCGISSLASLPMVA 321


>gi|301612003|ref|XP_002935514.1| PREDICTED: cathepsin K-like [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 133/215 (61%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++P++DQG CGSCW FST G+LE    +  GK + +S Q LVDC +  +N G
Sbjct: 121 IDYRKKGYVTPIRDQGECGSCWAFSTVGALEGQLMKKTGKLVGISPQNLVDCVK--DNFG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y+K N G+D+EEAYPY G D  CK++      ++     +  G+E  L+
Sbjct: 179 CGGGYMTTAFKYVKKNKGIDSEEAYPYVGMDQKCKYNVSGRAAEIKGFKEVKKGSETALK 238

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AVGLV P+SV  +  +D F  YK G+Y    C      +NHAV+AVGYG +    YW+I
Sbjct: 239 KAVGLVGPISVGIDAGLDTFFLYKKGIYYDKSCDGDS--INHAVLAVGYGKQKKGKYWII 296

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWGE+WG+ GY  M   K N CGIA  ASYPV+
Sbjct: 297 KNSWGEDWGNKGYILMAREKGNACGIANLASYPVM 331


>gi|281346354|gb|EFB21938.1| hypothetical protein PANDA_009085 [Ailuropoda melanoleuca]
          Length = 333

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/211 (47%), Positives = 131/211 (62%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N GCNGGL   
Sbjct: 126 VTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAEGNAGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF Y+K NGGLD+EE+YPY  +DG CK+  E          +I    E+ L  +V  V P
Sbjct: 186 AFRYVKDNGGLDSEESYPYLAQDGRCKYKPEQSAANDTGFADIHQD-EESLMLSVATVGP 244

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW 283
           +SVA +  +D FRFY  G+Y    C +   D++H V+ VGYG +    +   YW++KNSW
Sbjct: 245 ISVAIDASLDTFRFYYKGIYYDPNCSSE--DLDHGVLVVGYGSDEREAENKNYWIVKNSW 302

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  WG  GY  M   + N CGIAT AS+P+V
Sbjct: 303 GTQWGMQGYILMAKDRGNHCGIATSASFPIV 333


>gi|2804266|dbj|BAA24444.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 5/201 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQGHCGSCW+FS +GSLE  + +  GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 133 VTKVKDQGHCGSCWSFSGSGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNTGCNGGLMDN 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE++YPY  +D  C + ++N G      V+I  G ED+L+ AV  V P
Sbjct: 193 AFRYIKDNGGIDTEQSYPYLAEDEKCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGP 252

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGEN 286
           VS+A +   + F+ Y  GVYS  +C +  +D  H V+ VGYG  +DG  YWL+KNSW  +
Sbjct: 253 VSIAIDASYETFQLYSDGVYSDPECSSQELD--HGVLVVGYGTSDDGQDYWLVKNSWRPS 310

Query: 287 WGDHGYFKMEMGK-NMCGIAT 306
            G +GY KM   + NMCG+A+
Sbjct: 311 CGLNGYIKMARNQDNMCGVAS 331


>gi|197258086|gb|ACH56227.1| cathepsin S-like cysteine proteinase [Radopholus similis]
          Length = 314

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/209 (49%), Positives = 134/209 (64%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTGSL  A+ +A GK +SLSEQ LVDC+    N     GL   
Sbjct: 108 VTEVKDQGQCGSCWAFSTTGSLGGAHAKATGKLVSLSEQNLVDCSS--ENSVHEHGLMDV 165

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YI+ NGG+DTE +YPY G +   CK+S  NVG  +   V++  G E EL+ AV    
Sbjct: 166 AFDYIEENGGIDTERSYPYRGYEQYRCKYSKRNVGATMASYVDLPSGDEQELKIAVATQG 225

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGE 285
           P+SVA +   D F+ Y+SGVY   +CGN   +++H V+ VGYG +     YW++KNSW  
Sbjct: 226 PISVAIDASSDSFQLYESGVYKDKQCGNRRSNLDHGVLLVGYGTDPKHGDYWIVKNSWSA 285

Query: 286 NWGDHGYFKM-EMGKNMCGIATCASYPVV 313
            WG+ GY +M    +NMCGIAT ASYP V
Sbjct: 286 AWGEKGYIRMARNNRNMCGIATMASYPQV 314


>gi|224081608|ref|XP_002191568.1| PREDICTED: counting factor associated protein D-like [Taeniopygia
           guttata]
          Length = 546

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 159/304 (52%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  + R+ G+ Y SV E++ R + F  N+  + S N   LSY L LN             
Sbjct: 243 FHDYRRQMGRHYGSVRELEHRQSIFVHNMRFVHSRNRAALSYTLSLNQLADRTPQELAAL 302

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F+TTG++E 
Sbjct: 303 RGRRRSGTPNHGLPFPTDLYAGIILPESLDWRMYGAVTPVKDQAVCGSCWSFATTGAMEG 362

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           A     G    LS+Q L+DC+  F N  C+GG   +A+E+IK +GG+ + E+Y  Y G++
Sbjct: 363 ALFLKTGVLTPLSQQVLIDCSWGFGNYACDGGEEWRAYEWIKKHGGIASTESYGTYKGQN 422

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
           G+C ++   +  ++   VN+T G    ++ A+    PV+V+ +     F FY +GVY   
Sbjct: 423 GLCHYNQSEMLAKITGYVNVTSGNITAVKTAIYKHGPVAVSIDASHKSFSFYSNGVYYEP 482

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           KC NTP  ++HAV+AVGYGV  G  YWLIKNSW   WG+ GY  M M  N CG+AT A+Y
Sbjct: 483 KCDNTPGSLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNDGYILMAMKDNNCGVATEATY 542

Query: 311 PVVA 314
           P++A
Sbjct: 543 PILA 546


>gi|291224870|ref|XP_002732425.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 326

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 104/216 (48%), Positives = 134/216 (62%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FS+TGSLE    +  GK + LSEQQLVDC+  + N G
Sbjct: 114 IDWRTQGYVTDVKDQGACGSCWAFSSTGSLEGQTFKKTGKLVPLSEQQLVDCSGDYGNMG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG   QAF YIK + G ++E+ YPYTG D  C + +  V        +I    E+ LQ
Sbjct: 174 CGGGWMDQAFSYIK-DKGEESEDGYPYTGTDDTCVYDASKVVATDTGYTDIPEMDENALQ 232

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWL 278
            AV  V P+SVA +     F+FY+SGVY   +C  T +D  HAV+AVGYG  E+G+ YW+
Sbjct: 233 QAVATVGPISVAIDATHSSFQFYESGVYDEPECSQTNLD--HAVLAVGYGTSEEGLDYWI 290

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSW   WG  GY +M   K N CGIA+ ASYPVV
Sbjct: 291 VKNSWSTGWGMQGYIEMSRNKDNQCGIASKASYPVV 326


>gi|344271892|ref|XP_003407771.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/213 (50%), Positives = 135/213 (63%), Gaps = 12/213 (5%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   N+GCNGGL   
Sbjct: 126 VTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRREGNEGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK NGGLD+EE+YPYT  D   C+++ +         V+I    E  L  AV  V 
Sbjct: 186 AFQYIKDNGGLDSEESYPYTAMDKQDCRYNPKYSAANDTGFVDIPP-QEKALMKAVATVG 244

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-----YWLIKN 281
           P+SVA +   + F+FYKSG+Y  + C  +  D+NH V+ VGYG E G+      YWL+KN
Sbjct: 245 PISVAVDAGHESFQFYKSGIYYDSNC--SSKDLNHGVLVVGYGFE-GIDSANNRYWLVKN 301

Query: 282 SWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           SWG  WG  GY KM   + N CGIAT ASYP V
Sbjct: 302 SWGTGWGTDGYIKMAKDRNNHCGIATAASYPTV 334


>gi|38045864|gb|AAR08900.1| cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 98/207 (47%), Positives = 133/207 (64%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FS TG++E  Y +     IS SEQQLVDC+  + N+GC+GG    
Sbjct: 120 VTEVKDQGDCGSCWAFSATGAMEGQYMKNQKANISFSEQQLVDCSGDYGNRGCSGGFMEH 179

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT-LGAEDELQHAVGLVR 227
           A+EY+ Y  GL+TE +YPY  ++G CK+ S  +GV  ++       G E +L H VG   
Sbjct: 180 AYEYL-YEVGLETESSYPYKAEEGPCKYDSR-LGVAKVNGFYFDHFGVESKLAHLVGDKG 237

Query: 228 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           P +VA +V   F  Y+ G+Y+S  C +  +  NHA++ VGYG +DG  YW++KNSWG  W
Sbjct: 238 PAAVAVDVESDFLMYRGGIYASRNCSSEKL--NHAMLVVGYGTQDGTDYWIVKNSWGSLW 295

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GDHGY +M   + NMCGIA+ AS PVV
Sbjct: 296 GDHGYIRMARNRDNMCGIASFASLPVV 322


>gi|72005575|ref|XP_783218.1| PREDICTED: cathepsin L2-like isoform 2 [Strongylocentrotus
           purpuratus]
 gi|390337647|ref|XP_003724610.1| PREDICTED: cathepsin L2-like isoform 1 [Strongylocentrotus
           purpuratus]
          Length = 334

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 101/216 (46%), Positives = 130/216 (60%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FST G+LE  +    G  +SLSEQ LVDC+QA  N G
Sbjct: 121 VDWRTEGYVTPVKDQGQCGSCWAFSTVGALEGQHFVKTGTLVSLSEQNLVDCSQAEGNDG 180

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG P+ A EYIK NGG+DTE  YPY G D  C + + +VG  +     +   +E  L+
Sbjct: 181 CNGGWPAWADEYIKSNGGIDTEVGYPYEGVDDSCHYRTSDVGATITGFAEVEADSEKALE 240

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY-GVEDGVPYWL 278
            A+  V P+SV  +     F+ Y+SGVY    C +T +D  H V AVGY    DG  Y++
Sbjct: 241 KALAQVGPISVCIDATQPSFQLYESGVYDEPDCSSTALD--HCVTAVGYDSTADGDKYYI 298

Query: 279 IKNSWGENWGDHGYFKMEMGKN-MCGIATCASYPVV 313
           +KNSWG  WG  GY  M   K   CGIAT A+YP+V
Sbjct: 299 VKNSWGTTWGQEGYIWMSRDKQKQCGIATNATYPLV 334


>gi|339765072|gb|AEK01110.1| cathepsin L [Cristaria plicata]
 gi|397880684|gb|AFO67888.1| cathepsin L [Cristaria plicata]
          Length = 333

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/220 (45%), Positives = 133/220 (60%), Gaps = 10/220 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++ VKDQG CGSC+ FS TG+LE  + +  GK +SLSEQ +VDC+    N
Sbjct: 119 RQVDWRRKGYVTRVKDQGGCGSCYAFSATGALEGQHFRKTGKLVSLSEQNIVDCSFKEGN 178

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GC GGL  ++F YIK N G+D EEAYPY  +DG C+F    VG      V++    E  
Sbjct: 179 KGCKGGLMDKSFTYIKNNNGIDKEEAYPYEARDGPCRFRRSEVGATDRGYVDLPENDETA 238

Query: 219 LQHAVGLVRPVSVAFEVVDG----FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV 274
           L+HAV  + P+SVA   +DG    FRFY  GV+ +  C  T   +NH V+ VGYG  +G+
Sbjct: 239 LRHAVATIGPISVA---IDGHHFNFRFYDHGVFDNPNCSKTK--INHGVLVVGYGTRNGL 293

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YW++KNSWG  WG  GY  M     N C IA  ASYP+V
Sbjct: 294 DYWMVKNSWGRGWGAKGYILMSRNNDNQCCIACAASYPIV 333


>gi|167427531|gb|ABZ80402.1| cathepsin L6, partial [Fasciola hepatica]
          Length = 306

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 132/206 (64%), Gaps = 4/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW FSTTG++E  Y + F   +S SEQQLVDC+    N GC GG   +
Sbjct: 100 VTEVKDQGGCGSCWAFSTTGAIEGQYVKKFQTRVSFSEQQLVDCSTIPGNHGCRGGGMRR 159

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY+K N GL+ E +YPY   +G C++ S+    +V +S  +  G E +L++ +G   P
Sbjct: 160 AYEYLKKN-GLEPESSYPYKAVEGQCQYKSDLALAKVTNSQLVRSGNETQLKNLIGAEGP 218

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
            SVA +V   F  Y+SG+Y S  C +  M  NHAV+AVGYG E G+ YW++KNSWG  WG
Sbjct: 219 ASVAVDVKPDFSMYRSGIYQSQTCSSRRM--NHAVLAVGYGTEGGMDYWIVKNSWGPRWG 276

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
           + GY +M   + NMCGIA+  S P V
Sbjct: 277 EAGYIRMARNRNNMCGIASAGSLPTV 302


>gi|326672297|ref|XP_003199631.1| PREDICTED: cathepsin L1-like [Danio rerio]
          Length = 336

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 137/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPHGNQGCNGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPKGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 336


>gi|211953177|gb|ACJ13750.1| aleurain-like protease [Helianthus annuus]
 gi|211953179|gb|ACJ13751.1| aleurain-like protease [Helianthus annuus]
 gi|211953181|gb|ACJ13752.1| aleurain-like protease [Helianthus annuus]
 gi|211953183|gb|ACJ13753.1| aleurain-like protease [Helianthus annuus]
 gi|211953187|gb|ACJ13755.1| aleurain-like protease [Helianthus annuus]
 gi|211953189|gb|ACJ13756.1| aleurain-like protease [Helianthus annuus]
 gi|211953191|gb|ACJ13757.1| aleurain-like protease [Helianthus annuus]
 gi|211953193|gb|ACJ13758.1| aleurain-like protease [Helianthus annuus]
 gi|211953195|gb|ACJ13759.1| aleurain-like protease [Helianthus annuus]
 gi|211953203|gb|ACJ13763.1| aleurain-like protease [Helianthus annuus]
 gi|211953205|gb|ACJ13764.1| aleurain-like protease [Helianthus annuus]
 gi|211953207|gb|ACJ13765.1| aleurain-like protease [Helianthus annuus]
 gi|211953209|gb|ACJ13766.1| aleurain-like protease [Helianthus annuus]
 gi|211953213|gb|ACJ13768.1| aleurain-like protease [Helianthus annuus]
 gi|211953215|gb|ACJ13769.1| aleurain-like protease [Helianthus annuus]
 gi|211953217|gb|ACJ13770.1| aleurain-like protease [Helianthus annuus]
 gi|211953219|gb|ACJ13771.1| aleurain-like protease [Helianthus annuus]
          Length = 114

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 90/112 (80%), Positives = 101/112 (90%)

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           VQV+DSVNIT GAEDEL+HAVG+VRPVSVAFEV+  FR Y  GV++S  CG+ PMDVNHA
Sbjct: 3   VQVIDSVNITSGAEDELKHAVGVVRPVSVAFEVIANFRLYTGGVFTSDDCGSGPMDVNHA 62

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VVAVGYGVEDGVPYWLIKNSWG +WG +GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 63  VVAVGYGVEDGVPYWLIKNSWGADWGLNGYFKMEMGKNMCGVATCASYPIVA 114


>gi|351694995|gb|EHA97913.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 105/219 (47%), Positives = 135/219 (61%), Gaps = 9/219 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TGSLE    +  G+ +SLSEQ LVDC+Q   N
Sbjct: 61  KSVDWRKKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGQLVSLSEQNLVDCSQPQGN 120

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AFEY+K N GL++E++YPY GKDG C++  E         V+I    E  
Sbjct: 121 QGCNGGLMDFAFEYVKENKGLESEKSYPYEGKDGSCRYKPELSAANDTGFVDIPQ-REKA 179

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV    P+SVA +  +  F+FYK G+Y   +C  +  D+NH V+ VGYG E    + 
Sbjct: 180 LMKAVAEKGPISVAVDAGLMSFQFYKDGIYFDPEC--SSKDLNHGVLVVGYGYEEVDTEK 237

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
             YWL+KNSWG  WG  GY K+   + N CGIAT ASYP
Sbjct: 238 NEYWLVKNSWGPEWGAEGYIKIARNRNNHCGIATAASYP 276


>gi|301769893|ref|XP_002920368.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
          Length = 503

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 102/219 (46%), Positives = 134/219 (61%), Gaps = 9/219 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N G
Sbjct: 118 VDWREKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAEGNAG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF Y+K NGGLD+EE+YPY  +DG CK+  E          +I    E+ L 
Sbjct: 178 CNGGLMDNAFRYVKDNGGLDSEESYPYLAQDGRCKYKPEQSAANDTGFADIHQD-EESLM 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVP 275
            +V  V P+SVA +  +D FRFY  G+Y    C +   D++H V+ VGYG +    +   
Sbjct: 237 LSVATVGPISVAIDASLDTFRFYYKGIYYDPNCSSE--DLDHGVLVVGYGSDEREAENKN 294

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           YW++KNSWG  WG  GY  M   + N CGIAT AS+P+V
Sbjct: 295 YWIVKNSWGTQWGMQGYILMAKDRGNHCGIATSASFPIV 333



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 11/127 (8%)

Query: 193 VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTK 251
           + +   E     V   VN+    E+ +  AV    PVS A     G F+F K G+Y    
Sbjct: 382 ILRTRPECSAADVTGPVNVPQ-QEEAVMLAVAAGGPVSAAIRASLGSFQFCKEGIYYDPN 440

Query: 252 CGNTPMDVNHAVVAVGYGVED----GVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIAT 306
           C +   D++H V+ VGYG ++       YW++KNSWG +WG  GY  +     N C I T
Sbjct: 441 CSSE--DLDHGVLVVGYGSDEREAENKNYWIVKNSWGTDWGLQGYMLLVRDWDNHCEITT 498

Query: 307 CASYPVV 313
             S+PVV
Sbjct: 499 --SFPVV 503


>gi|1272388|gb|AAB17051.1| cysteine protease, partial [Spirometra mansonoides]
          Length = 216

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 99/207 (47%), Positives = 130/207 (62%), Gaps = 5/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW+FS  G++E A     G   +LSEQQLVDC+  + NQGCNGG  S 
Sbjct: 13  VTSVKNQGQCGSCWSFSANGAIEGAIQIKMGILPTLSEQQLVDCSWEYGNQGCNGGFMSL 72

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y +   G++ E  Y YT KDG C++  + V   V     +  G E  LQ AV ++ P
Sbjct: 73  AFQYAQ-RYGVEAEVDYRYTAKDGFCRYQQDMVVANVTGYAELPQGDEASLQRAVAVIGP 131

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +  D GF  Y  GV+ S  C  +P D+NH V+ +GYG E+  PYWL+KNSWG +W
Sbjct: 132 ISVGIDANDPGFMSYSHGVFVSKTC--SPDDINHGVLVIGYGTENDEPYWLVKNSWGRSW 189

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY KM   K NMCGIA+ ASYP V
Sbjct: 190 GEQGYVKMARNKNNMCGIASVASYPTV 216


>gi|74219261|dbj|BAE26764.1| unnamed protein product [Mus musculus]
          Length = 333

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 136/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R+   ++PVK+QG+C S W FS TGSLE    +  G+ + LSEQ L+DC  +   
Sbjct: 116 KYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVT 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
             C+GG    AF+Y+K NGGL TEE+YPY G D  C++ +EN    V D V I  G E+ 
Sbjct: 176 HDCSGGFMQNAFQYVKDNGGLATEESYPYIGPDRKCRYHAENSAANVRDFVQIP-GREEA 234

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   D F+FY SG+Y   +C    + +NHAV+ VGYG E    DG
Sbjct: 235 LMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDG 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY K+     N CGIAT A+YP+V
Sbjct: 293 NSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 333


>gi|74151179|dbj|BAE27712.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 134/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E+ 
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEEA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|296189340|ref|XP_002742739.1| PREDICTED: cathepsin L1 [Callithrix jacchus]
          Length = 333

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 135/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGC+GGL   AF+Y++ NGGLD+EE+YPY   +  CK++ E         V+I    E  
Sbjct: 176 QGCDGGLMDYAFQYVQENGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KLEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F+FYK G+Y   +C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFQFYKEGIYFEPECSSEDMD--HGVLVVGYGFERTGSDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    KN CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEKWGMDGYIKMAKDRKNHCGIASAASYPTV 333


>gi|332376957|gb|AEE63618.1| unknown [Dendroctonus ponderosae]
          Length = 318

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 7/213 (3%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++ VKDQG CGSCW FS  GS E AY+++ GK +SLSEQQL+DC    N+ G
Sbjct: 113 LDWRSQGYVTGVKDQGDCGSCWAFSVVGSTEGAYYKSTGKLVSLSEQQLIDCTTNVND-G 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG   + F Y++   GL +E +YPYTG+DG C+ S  +V  +V  S  + LG E +L 
Sbjct: 172 CDGGYLEETFPYVQ-QTGLVSESSYPYTGRDGNCRISESDVVTKV--SKYVLLGGEADLL 228

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
            AVG V PVSVA +    +  Y SGVY S+ C  +   +NH V+ VGYG +DG  YWLIK
Sbjct: 229 EAVGSVGPVSVAMDATYIYS-YASGVYESSLC--SLYSLNHGVLVVGYGTQDGKDYWLIK 285

Query: 281 NSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NSWG  WG+ GY K+  G N CGIA    YP++
Sbjct: 286 NSWGNTWGEQGYLKLLRGTNECGIAEDDVYPII 318


>gi|38146075|gb|AAR11477.1| cathepsin L [Litopenaeus vannamei]
          Length = 297

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 146/285 (51%), Gaps = 55/285 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------- 108
           +  F   +G+ Y SV+E + R + F +N   I   N +     +++ L +N         
Sbjct: 15  WQNFKAEHGRHYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEE 74

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVKDQ  CGSCW FSTTGSL
Sbjct: 75  IVATMNGFLGAPTRRPAAVLKADDETLPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSL 134

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E  +    GK +SLSEQ LVDC+  F N GC GGL  QAF YIK N G+DTE++YPY  +
Sbjct: 135 EGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQ 194

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSS 249
           DG C+F + NVG      V++  G+E  L+ AV  + P+SV  +     F FY +GVY  
Sbjct: 195 DGKCRFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHD 254

Query: 250 TKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYF 293
             C +T +D  H V+AVGYG  E+G  +WL+KNSW  +WGD GY 
Sbjct: 255 DHCSSTMLD--HGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYI 297


>gi|403300975|ref|XP_003941187.1| PREDICTED: cathepsin L1-like isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403300977|ref|XP_003941188.1| PREDICTED: cathepsin L1-like isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403300979|ref|XP_003941189.1| PREDICTED: cathepsin L1-like isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 333

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 135/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 QGCNGGLMDYAFQYVQENGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KLEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F+FYK G+Y   +C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFQFYKEGIYFEPECSSEDMD--HGVLVVGYGFERTGSDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    KN CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEEWGMDGYIKMAKDRKNHCGIASAASYPTV 333


>gi|294885989|ref|XP_002771502.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
 gi|239875206|gb|EER03318.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
          Length = 337

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 152/294 (51%), Gaps = 57/294 (19%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L+F  F +++GK Y++ EE   R A F  NL+ I   N + LSY+LG+N           
Sbjct: 25  LAFIGFQKKHGKSYDNKEEEMKRAAIFHDNLNYIEEVNAQNLSYKLGVNEYTDLTLEEFA 84

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  ++PVKDQG+CGSCW FS  G+
Sbjct: 85  ALKLSSTDMSEGMGDGFVAGAGPTTTTLPTSVDWRKKGVLNPVKDQGYCGSCWAFSAIGA 144

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE  Y  A GK +SLSEQQLVDCA A+ N+GCNGGL  +AFEYIK   G+D E  YPY G
Sbjct: 145 LEPRYAIATGKLLSLSEQQLVDCAGAYGNEGCNGGLMDKAFEYIKAT-GVDKESTYPYVG 203

Query: 190 KDGVCKFSSEN----VGVQVLDSVNITLGAEDELQHAVGLVRPVSVA-FEVVDGFRFYKS 244
            D  C+ + EN    + V  +    +    E  L   V    PVS+A +  +  F+ YKS
Sbjct: 204 SDETCQATVENKTDGLPVGEVTGNQMLHQTEKALMEGVA-AAPVSIAMYANLQSFQHYKS 262

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           GVYS   C      ++H VVAVGYG E+G  Y++I+NSWG +WG  GY  ++ G
Sbjct: 263 GVYSDPNCNAKGGSIDHGVVAVGYGTENGQDYFIIRNSWGRSWGQDGYVYLKRG 316


>gi|45550332|gb|AAS67922.1| cathepsin L [Artemia franciscana]
          Length = 226

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 132/215 (61%), Gaps = 2/215 (0%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK  G C SC  FS TG+LE+   +  GK ISLSEQ L+DC+  + N G
Sbjct: 12  VDWREKGAVTPVKYPGQCASCLAFSPTGALESQTFRKTGKLISLSEQNLIDCSGEYGNLG 71

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  SQAFEYIK N G+DTE  Y Y  K+  C+ +  N G   L  VNI  G ED+L+
Sbjct: 72  CKGGWISQAFEYIKDNKGIDTENKYHYEAKENFCRDNPRNRGAVALGFVNIPSGEEDKLK 131

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVS   +V  +GF+FY  GVY    C  +   +NH V+ +G G ++G  YWL+
Sbjct: 132 AAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCKTSFEHLNHEVLVIGCGSDNGEDYWLV 191

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSW ++WGD GY K+    KN CG+AT A YP+V
Sbjct: 192 KNSWSKHWGDEGYLKIARNRKNHCGVATAALYPIV 226


>gi|310751866|gb|ADP09371.1| cathepsin L-like proteinase [Fasciola hepatica]
          Length = 326

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC++ + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPY   +G C+++ +    +V     +  G+E EL+
Sbjct: 172 CGGGLMENAYEYLK-QFGLETESSYPYRAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y  G+Y S  C  +P+ +NHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFMMYSGGIYQSQTC--SPLGLNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS  +VA
Sbjct: 289 NSWGLSWGERGYIRMARNRGNMCGIASLASLLMVA 323


>gi|157787177|ref|NP_001099150.1| cathepsin L1-like precursor [Danio rerio]
 gi|157422879|gb|AAI53505.1| MGC174152 protein [Danio rerio]
          Length = 336

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 137/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPRGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 336


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDYAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|211953201|gb|ACJ13762.1| aleurain-like protease [Helianthus annuus]
 gi|211953211|gb|ACJ13767.1| aleurain-like protease [Helianthus annuus]
          Length = 114

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/112 (80%), Positives = 101/112 (90%)

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           VQV+DSVNIT GAEDEL+HAVG+VRPVSVAFEV+  FR Y  GV++S  CG+ PMDVNHA
Sbjct: 3   VQVVDSVNITSGAEDELKHAVGVVRPVSVAFEVIANFRLYTGGVFTSDDCGSGPMDVNHA 62

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VVAVGYGVEDGVPYWLIKNSWG +WG +GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 63  VVAVGYGVEDGVPYWLIKNSWGADWGLNGYFKMEMGKNMCGVATCASYPIVA 114


>gi|171702843|dbj|BAG16377.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 431

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 157/306 (51%), Gaps = 61/306 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           +  +  ++GK   S+ E   RF  F  NL  I   N K LSYRLGL              
Sbjct: 42  YEEWVVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSM 101

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++ VKDQG CGSCW FST G++E 
Sbjct: 102 YLGSRLKRKATKTSLRYEARVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEG 161

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
                 G  ISLSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DTEE YPY G DG
Sbjct: 162 INKIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIKNGGIDTEEDYPYKGVDG 220

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  + +N  V  +DS  ++   +E+ L+ A+   +P+SVA E     F+ Y SG++   
Sbjct: 221 RCDQTRKNAKVVTIDSYEDVPANSEESLKKALSH-QPISVAIEGGGRAFQLYDSGIFDGI 279

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIAT 306
            CG    D++H VVAVGYG E+G  YW++KNSWG +WG+ GY +ME         CGIA 
Sbjct: 280 -CGT---DLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIASSAGKCGIAV 335

Query: 307 CASYPV 312
             SYP+
Sbjct: 336 EPSYPI 341


>gi|139947602|ref|NP_001077155.1| cathepsin L1 precursor [Bos taurus]
 gi|134025180|gb|AAI34742.1| CTSL1 protein [Bos taurus]
 gi|296484500|tpg|DAA26615.1| TPA: cathepsin L1 [Bos taurus]
          Length = 333

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 154/265 (58%), Gaps = 28/265 (10%)

Query: 57  RHALS-FARFARRYGK-IYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKD 114
           RH ++ F R   + GK  +E++      FA+   ++D           +R    ++PVK+
Sbjct: 89  RHTMNGFQRQKNKKGKEFHETI------FASIPPSVD-----------WREKGYVTPVKN 131

Query: 115 QGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK 174
           QG CGSCW FS TG+LE    Q  GK +SLSEQ LVDC+Q   N+GC+GG    AF+Y+ 
Sbjct: 132 QGKCGSCWAFSATGALEGQMFQKTGKLVSLSEQNLVDCSQPEGNRGCHGGFIDNAFQYVL 191

Query: 175 YNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 234
             GGLD+EE+YPYTG  G C ++  N        V++    E  L  AV  + P+SVA +
Sbjct: 192 DVGGLDSEESYPYTGLVGTCLYNPNNSAANETGFVDLP-KQEKALMKAVANLGPISVAVD 250

Query: 235 VVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGD 289
             +  F+FYKSG+Y    C +  +D  HAV+ VGYG E    D   YWL+KNSWGE+WG 
Sbjct: 251 AHNPSFQFYKSGIYYEPNCSSESVD--HAVLVVGYGFEGADSDDNKYWLVKNSWGEHWGM 308

Query: 290 HGYFKMEMGK-NMCGIATCASYPVV 313
           +GY KM   + N CGIAT ASYP V
Sbjct: 309 NGYIKMAKDRNNHCGIATMASYPTV 333


>gi|294885991|ref|XP_002771503.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
 gi|239875207|gb|EER03319.1| thiolproteinase SmTP1, putative [Perkinsus marinus ATCC 50983]
          Length = 337

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 156/305 (51%), Gaps = 57/305 (18%)

Query: 49  VLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN 108
           V + +     +L+F  F +++GK Y++ +E   R A F  NL+ I   N + LSY+LG+N
Sbjct: 14  VYKAVDLETSSLAFIGFQKKHGKSYDNKDEEMKRAAIFHDNLNYIEEVNAQNLSYKLGVN 73

Query: 109 --------------------------------------------------ISPVKDQGHC 118
                                                             ++PVKDQG+C
Sbjct: 74  EYTDLTLEEFAALKLSSTDMSEGMGDGFVAGAGPTTTTLPTSVDWRKKGVLNPVKDQGYC 133

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FS  G+LE  Y  A GK +SLSEQQLVDCA A+ N+GCNGGL  +AFEYIK   G
Sbjct: 134 GSCWAFSAIGALEPRYAIATGKLLSLSEQQLVDCAGAYGNEGCNGGLMDKAFEYIKAT-G 192

Query: 179 LDTEEAYPYTGKDGVCKFSSEN----VGVQVLDSVNITLGAEDELQHAVGLVRPVSVA-F 233
           +D E  YPY G D  C+ + EN    + V  +    +    E  L   V    PVS+A +
Sbjct: 193 VDKESTYPYVGSDETCQATVENKTDGLPVGEVTGNQMLHQTEKALMEGVA-AAPVSIAMY 251

Query: 234 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYF 293
             +  F+ YKSGVYS   C      ++H VVAVGYG E+G  Y++I+NSWG +WG  GY 
Sbjct: 252 ANLQSFQHYKSGVYSDPNCNAKGGSIDHGVVAVGYGTENGQDYFIIRNSWGRSWGQDGYV 311

Query: 294 KMEMG 298
            ++ G
Sbjct: 312 YLKRG 316


>gi|2804264|dbj|BAA24443.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 133/201 (66%), Gaps = 5/201 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQGHCGSCW+FS +GSLE  + +  GK +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 133 VTKVKDQGHCGSCWSFSGSGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDN 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF YIK NGG+DTE++YPY  +D  C + ++N G      V+I  G ED+L+ AV  V P
Sbjct: 193 AFRYIKDNGGIDTEQSYPYLAEDEKCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGP 252

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGEN 286
           +S+A +   + F+ Y  GVYS  +C +  +D  H V+ VGYG  +DG  YWL+KNSW  +
Sbjct: 253 ISIAIDASYETFQLYSDGVYSDPECISQELD--HGVLVVGYGTSDDGQDYWLVKNSWRPS 310

Query: 287 WGDHGYFKMEMGK-NMCGIAT 306
            G +GY KM   + NMCG+A+
Sbjct: 311 CGLNGYIKMARNQDNMCGVAS 331


>gi|211909242|gb|ACJ12894.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPY   +G C+++ +    +V     +  G E  L+
Sbjct: 172 CGGGLMENAYEYLK-QFGLETESSYPYRAVEGQCRYNRQLGVAKVTGYYTLHSGNEAGLK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
             VG   P +VA +V   F  Y+SG+Y S  C  +P+ +NHAV+AVGYG + G  YW++K
Sbjct: 231 SLVGSEGPAAVAVDVESDFMMYRSGIYQSQTC--SPLGLNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGLSWGERGYIRMARNRGNMCGIASLASLPMVA 323


>gi|211909240|gb|ACJ12893.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPY   +G C+++ +    +V     +  G E  L+
Sbjct: 172 CGGGLMENAYEYLK-QFGLETESSYPYRAVEGQCRYNRQLGVAKVTGYYTLHSGNEAGLK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
             VG   P +VA +V   F  Y+SG+Y S  C  +P+ +NHAV+AVGYG + G  YW++K
Sbjct: 231 SLVGSEGPAAVAVDVESDFMMYRSGIYQSQTC--SPLGLNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGLSWGERGYIRMARNRGNMCGIASLASLPMVA 323


>gi|157311713|ref|NP_001098585.1| uncharacterized protein LOC564979 precursor [Danio rerio]
 gi|156230121|gb|AAI52284.1| Wu:fa26c03 protein [Danio rerio]
          Length = 336

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 137/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPRGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CG+AT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGVATSASYPLM 336


>gi|7271893|gb|AAF44677.1|AF239266_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 146/256 (57%), Gaps = 8/256 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L+F  F  +Y        E+  R   +  N   +  +    + +R    ++ VKDQG CG
Sbjct: 75  LTFEEFKTKYLIEIPRSSELLSRGIPYKANKPAVPES----IDWRDYYYVTEVKDQGQCG 130

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FSTTG++E  + +      S SEQQLVDC + F N GC GG    A+EY+K++ GL
Sbjct: 131 SCWAFSTTGAMEGQFRKNERASASFSEQQLVDCTRNFGNHGCGGGYMENAYEYLKHS-GL 189

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF 239
           +T+  YPY   +G C++       +V D   +  G E EL++ VG   P +VA +V   F
Sbjct: 190 ETDSYYPYQAVEGPCQYDGRLAYAKVTDYYTVHSGDEVELKNLVGTEGPAAVALDVDYDF 249

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK 299
             Y+SG+Y S  C   P  + HAV+AVGYG +DG  YW++KNSWG +WG+ GY +    +
Sbjct: 250 MMYESGIYHSETC--LPDRLTHAVLAVGYGAQDGTDYWIVKNSWGSSWGEKGYIRFARNR 307

Query: 300 -NMCGIATCASYPVVA 314
            NMCGIA+ AS P+VA
Sbjct: 308 GNMCGIASLASVPMVA 323


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|403333364|gb|EJY65772.1| Cathepsin L [Oxytricha trifallax]
          Length = 338

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 164/315 (52%), Gaps = 56/315 (17%)

Query: 47  TSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRL 105
           T +   I    HA  F  F  +YGK Y + EE   R   F +NL  +   N +  ++YRL
Sbjct: 30  TQLYTPITAEDHA--FTNFVAKYGKSYGTKEEYDFRSKLFKQNLAKVSMNNARNDVTYRL 87

Query: 106 GLN---------------------------------------------ISPVKDQGHCGS 120
           GLN                                             ++PVKDQG CGS
Sbjct: 88  GLNKFADYTEAEYKRLLGFGGQKNKNPRNIKVLGAPKNDGVNWVEQGAVTPVKDQGQCGS 147

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLD 180
           CW+FS TG++E      FG   SLSEQQLVDC+QA  N+GC GG   QAF+Y++    L+
Sbjct: 148 CWSFSATGAMEGHAKIQFGTLYSLSEQQLVDCSQAEGNEGCGGGWMDQAFQYVEQT-ALE 206

Query: 181 TEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-F 239
           TE+ YPY   D  C+ SS  V V+V   V++T    +EL+ A+    PVSVA E     F
Sbjct: 207 TEDQYPYEAVDDTCRASSAGV-VKVDSFVDVTPNNVNELKAALDK-GPVSVAIEADQMVF 264

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG- 298
           +FY  GV +   CG T   ++H V+AVGYG E G  Y+L+KNSWG +WG+ GY K+    
Sbjct: 265 QFYSGGVINDASCGTT---LDHGVLAVGYGNESGQDYFLVKNSWGASWGEEGYVKIAASP 321

Query: 299 KNMCGIATCASYPVV 313
            N+CGI + ASYP++
Sbjct: 322 DNICGILSQASYPIM 336


>gi|301789679|ref|XP_002930256.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281343339|gb|EFB18923.1| hypothetical protein PANDA_020645 [Ailuropoda melanoleuca]
          Length = 334

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/222 (47%), Positives = 137/222 (61%), Gaps = 10/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + + L   ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+++  N
Sbjct: 116 KSVDWTLKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRSQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL   AF+Y+K NGGLD+EE+YPY G D   CK+  E         V+I    E 
Sbjct: 176 EGCNGGLMDNAFQYVKENGGLDSEESYPYLGTDTDSCKYKPECSAANDTGFVDIPQ-REK 234

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  AV  V P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E    +
Sbjct: 235 ALMKAVATVGPISVAIDAGHQSFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGTDSN 292

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
              +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 293 NNKFWIVKNSWGPEWGTNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANGTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|74200292|dbj|BAE22939.1| unnamed protein product [Mus musculus]
          Length = 308

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 90  KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 149

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 150 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 208

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 209 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 266

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 267 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 307


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/303 (40%), Positives = 154/303 (50%), Gaps = 63/303 (20%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN------------ 108
           F   Y K YES      R A F  NL+ I   N    +GL SY +G+N            
Sbjct: 1   FKSDYSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLTIDEFMA 60

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            ++P+K+QG CGSCW+FSTTGS E A+ 
Sbjct: 61  LYVPSKFNRTMPYNTVYLPATSEDSVDWRTKGAVTPIKNQGQCGSCWSFSTTGSTEGAHA 120

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 195
            A G  +SLSEQQLVDC+ +F NQGCNGGL   AF+YI  N GLDTEE YPYT +DG C 
Sbjct: 121 IATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDDAFKYIISNKGLDTEEDYPYTAQDGTCN 180

Query: 196 FSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
              E      + S  ++    ED+L  AV    PVSVA E    GF+ YKSGV+     G
Sbjct: 181 KEKEAKHAATISSYSDVPKNNEDQLAAAVAK-GPVSVAIEADQSGFQLYKSGVFD----G 235

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG---KNMCGIATCASY 310
           N   +++H V+ VGY  +    YW++KNSWG  WG  GY  M+ G     +CGIA   SY
Sbjct: 236 NCGTNLDHGVLVVGYTDD----YWIVKNSWGTTWGVEGYINMKRGVSASGICGIAMQPSY 291

Query: 311 PVV 313
           P+V
Sbjct: 292 PIV 294


>gi|211953185|gb|ACJ13754.1| aleurain-like protease [Helianthus annuus]
          Length = 114

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/112 (79%), Positives = 101/112 (90%)

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           VQV+DSVNIT GAED+L+HAVG+VRPVSVAFEV+  FR Y  GV++S  CG+ PMDVNHA
Sbjct: 3   VQVIDSVNITSGAEDKLKHAVGVVRPVSVAFEVIANFRLYTGGVFTSDDCGSGPMDVNHA 62

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VVAVGYGVEDGVPYWLIKNSWG +WG +GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 63  VVAVGYGVEDGVPYWLIKNSWGADWGLNGYFKMEMGKNMCGVATCASYPIVA 114


>gi|403368476|gb|EJY84073.1| Cathepsin L [Oxytricha trifallax]
          Length = 338

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 164/315 (52%), Gaps = 56/315 (17%)

Query: 47  TSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRL 105
           T +   I    HA  F  F  +YGK Y + EE   R   F +NL  +   N +  ++YRL
Sbjct: 30  TQLYTPITPEDHA--FTNFVAKYGKSYGTKEEYDFRSKLFKQNLAKVSMNNVRNDVTYRL 87

Query: 106 GLN---------------------------------------------ISPVKDQGHCGS 120
           GLN                                             ++PVKDQG CGS
Sbjct: 88  GLNKFADYTEAEYKRLLGFGGQKNKNPRNIKVLGAPKNDGVNWVEQGAVTPVKDQGQCGS 147

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLD 180
           CW+FS TG++E      FG   SLSEQQLVDC+QA  N+GC GG   QAF+Y++    L+
Sbjct: 148 CWSFSATGAMEGHAKIQFGTLYSLSEQQLVDCSQAEGNEGCGGGWMDQAFQYVE-QTALE 206

Query: 181 TEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-F 239
           TE+ YPY   D  C+ SS  V V+V   V++T    +EL+ A+    PVSVA E     F
Sbjct: 207 TEDQYPYEAVDDTCRASSAGV-VKVDSFVDVTPNNVNELKAALDK-GPVSVAIEADQMVF 264

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG- 298
           +FY  GV +   CG T   ++H V+AVGYG E G  Y+L+KNSWG +WG+ GY K+    
Sbjct: 265 QFYSGGVINDASCGTT---LDHGVLAVGYGNESGQDYFLVKNSWGASWGEEGYVKIAASP 321

Query: 299 KNMCGIATCASYPVV 313
            N+CGI + ASYP++
Sbjct: 322 DNICGILSQASYPIM 336


>gi|149755226|ref|XP_001494409.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 334

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/222 (47%), Positives = 138/222 (62%), Gaps = 10/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N
Sbjct: 116 KTVDWREKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAEGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           QGCNGGL   AF+Y+K NGGLD+EE+YPY  K+G  C +  E         V+I    E 
Sbjct: 176 QGCNGGLMDNAFQYVKDNGGLDSEESYPYLAKEGNNCNYKPEYSAANDTGYVDIPQ-KEK 234

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  AV  V P+SVA +   + F+FYKSG+Y    C  +  D++H V+ VGYG E    +
Sbjct: 235 ALMKAVATVGPISVAIDAGHESFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGRDSN 292

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
              +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 293 NNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|17224950|gb|AAL37181.1|AF320084_1 cathepsin L-like protease [Ancylostoma caninum]
          Length = 214

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/208 (47%), Positives = 135/208 (64%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +A G+ +SLSEQ LVDC+  + N GCNGGL   
Sbjct: 9   VTEVKNQGMCGSCWAFSATGALEGQHARASGQMVSLSEQNLVDCSTKYGNHGCNGGLMDL 68

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTEE+YPY G+D  C F  +++G      V++  G E+ L+ AV    P
Sbjct: 69  AFEYIKDNHGIDTEESYPYVGRDMKCHFKKKDIGAVDNGYVDLPEGDEEALKIAVATQGP 128

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +S+A +     F+ YK GVY   +C +  +D  H V+ VGYG + +   YWL+KNSWG  
Sbjct: 129 ISIAIDAGHRTFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEAGDYWLVKNSWGTG 186

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY ++   + N CG+AT ASYP+V
Sbjct: 187 WGEKGYIRIARNRNNHCGVATKASYPLV 214


>gi|62526575|gb|AAX84673.1| cysteine protease CP1 [Manihot esculenta]
          Length = 467

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 159/303 (52%), Gaps = 64/303 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           + GK+Y ++ E + RF  F  NL  I   N +  +Y+LGLN                   
Sbjct: 58  KQGKVYNALGEREKRFQVFKDNLRFIDEHNSENRTYKLGLNGFADLTNEEYRSTYLGARG 117

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            ++ VKDQG CGSCW FST  ++E    
Sbjct: 118 GMKRNRLRKTSDRYAPRVGESLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINK 177

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 195
              G  ISLSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DTEE YPY  +DG C 
Sbjct: 178 IVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIINNGGIDTEEDYPYLARDGRCD 236

Query: 196 FSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
              +N  V  +D   ++ + +E  LQ AV   +PVSVA E     F+FY SG++S  +CG
Sbjct: 237 TYRKNAKVVTIDDYEDVPVNSETALQKAVA-NQPVSVAIEAGGRDFQFYASGIFSG-RCG 294

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCAS 309
                ++H V AVGYG E+G  YW+++NSWG++WG++GY +M    N    +CGIA  AS
Sbjct: 295 TQ---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGENGYLRMARSINSPTGICGIAMEAS 351

Query: 310 YPV 312
           YP+
Sbjct: 352 YPI 354


>gi|189525868|ref|XP_001341714.2| PREDICTED: cathepsin L1-like isoform 1 [Danio rerio]
          Length = 336

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 137/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPSGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CG+AT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|7542602|gb|AAF63517.1|AF242733_1 putative cystein proteinase [Capsicum annuum]
          Length = 128

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 105/123 (85%)

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG 238
           LDT+EAYPYT K+G+CKFS   +   V+DSVNITLG EDEL++AV LVRPVSVAFEV+ G
Sbjct: 6   LDTKEAYPYTAKNGICKFSQAKLVSNVIDSVNITLGPEDELKYAVALVRPVSVAFEVIKG 65

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F+ YKSGVY+S +CGNTPMDVNHAV+AVGYGVE+G+PYWLIKNSWG N GD GYFK   G
Sbjct: 66  FKQYKSGVYTSAECGNTPMDVNHAVLAVGYGVENGIPYWLIKNSWGANGGDSGYFKWRWG 125

Query: 299 KNM 301
           +N+
Sbjct: 126 RNV 128


>gi|15593255|gb|AAL02223.1|AF410883_1 cysteine protease CP19 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/220 (48%), Positives = 139/220 (63%), Gaps = 8/220 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R     +P+KDQG CGSCW+FS TGSLE          +SLSEQ LVDC+  F N
Sbjct: 118 KKVDWRSKGAATPIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKF-SSENVGVQVLDSVNITLGAE 216
           +GCNGGL   AFEY+K NGG+DTEE+YPYT  DG  C + ++ N GV      ++   +E
Sbjct: 178 EGCNGGLMDSAFEYVKSNGGIDTEESYPYTAVDGDSCLYRAANNAGVNT-GYKDVQAKSE 236

Query: 217 DELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGV 274
             L+ AV  V PVSVA +  +  F+ Y SG+Y  + C +  +D  H V+AVGYG E    
Sbjct: 237 SALRDAVEKVGPVSVAIDASNWSFQMYSSGIYYESACSSDYLD--HGVLAVGYGSEWPNK 294

Query: 275 PYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            +W++KNSWG +WG+ GY KM    KN CGIAT ASYP+V
Sbjct: 295 EFWIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 334


>gi|218478060|dbj|BAH03396.1| cathepsin L-like cysteine peptidase [Taenia saginata]
          Length = 338

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 7/208 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG+CGSCW FS+TG+LE A+ +  GK ISLSEQQLVDC+    N GCNGG  S 
Sbjct: 135 VTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSY 194

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y++ +  ++ E AYPY   DG C++ +E++GV  V D  +I  G E  L  AV  V 
Sbjct: 195 AFKYLEEH-SIEPESAYPYRATDGPCRY-NESLGVGTVTDIGDIPEGNETALMEAVATVG 252

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           P+S+A +    GF FY+ G+Y S  C +  +  NH V+A+GYG +DG PYWL+KNSWG  
Sbjct: 253 PISIAIDASSLGFMFYRHGIYKSHWCSSKFL--NHGVLAIGYGKQDGKPYWLVKNSWGTR 310

Query: 287 WGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WG  GY  M     NMCG+A+ A +P V
Sbjct: 311 WGMKGYIMMAKDYHNMCGVASLADFPYV 338


>gi|211953197|gb|ACJ13760.1| aleurain-like protease [Helianthus annuus]
          Length = 114

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/112 (79%), Positives = 101/112 (90%)

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           VQV+DSVNIT GAEDEL+HAVG+VRPVSVAFEV+  FR Y  GV++S  CG+ PMDVNHA
Sbjct: 3   VQVIDSVNITSGAEDELKHAVGVVRPVSVAFEVIANFRLYTGGVFTSGDCGSGPMDVNHA 62

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VVAVGYGVEDGVPYWLIK+SWG +WG +GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 63  VVAVGYGVEDGVPYWLIKDSWGADWGLNGYFKMEMGKNMCGVATCASYPIVA 114


>gi|281200606|gb|EFA74824.1| cysteine proteinase 5 precursor [Polysphondylium pallidum PN500]
          Length = 307

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 151/301 (50%), Gaps = 68/301 (22%)

Query: 75  SVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------------------- 108
           + +E   RF  F KN+D +   N KG S  LGLN                          
Sbjct: 9   TAQEFGTRFNIFKKNMDFVHKWNAKGSSTVLGLNSMADISNEEYQRVYLGTHIDASQFRQ 68

Query: 109 -------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 143
                                    ++P+K+QG CGSCW+FSTTGS E A+    G  +S
Sbjct: 69  QAASHKLGRTFKVQAANVDWRAKGAVTPIKNQGQCGSCWSFSTTGSTEGAHFIKTGNLVS 128

Query: 144 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVG 202
           LSEQ L+DC++   NQGCNGGL + AFEYI  N G+DTE +YPY  +DG  C ++  N  
Sbjct: 129 LSEQNLMDCSKPEGNQGCNGGLMTAAFEYIIKNNGIDTESSYPYKAEDGKKCLYNPANSA 188

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNH 261
             +   VN+T G+E +L    GL  PVSVA +   + F+ Y SGVY   KC  T +D  H
Sbjct: 189 ATLSSYVNVTTGSESDLAVKSGL-GPVSVAIDASHNSFQLYSSGVYYEPKCSQTQLD--H 245

Query: 262 AVVAVGYGVEDGVP----------YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASY 310
            V+ VGYG  D +P          +W++KNSWG  WG  GY  M   + N CGIAT AS 
Sbjct: 246 GVLVVGYG-SDALPSAGVSAGSGDWWIVKNSWGTTWGVEGYIYMSRNRNNNCGIATMASL 304

Query: 311 P 311
           P
Sbjct: 305 P 305


>gi|42564163|gb|AAS20593.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 324

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 158/315 (50%), Gaps = 60/315 (19%)

Query: 56  ARHALS----FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKGLS-YRLGL 107
           A  ALS    +  F   + K Y++V E K RF  F  NL  I   N    +GLS Y +G+
Sbjct: 13  ATEALSDKEKWQNFKINFSKSYQNVVEEKRRFNIFLSNLLRIEEHNQNFSRGLSTYEMGV 72

Query: 108 N------------------------------------------------ISPVKDQGHCG 119
           N                                                ++ VK QG CG
Sbjct: 73  NKFADLTPEEFMERFRPLRKTKPKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCG 132

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FSTTGS+E+      GK ISLSEQQLVDC +  NN GC GG    A EYI+ +G +
Sbjct: 133 SCWAFSTTGSVESHNFIKTGKLISLSEQQLVDCVK--NNSGCAGGWMDIALEYIEADGIM 190

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF 239
            +E+ YPY  ++  C+F++    VQ+     I    E +LQ AV L  PVSVA EV   F
Sbjct: 191 -SEDDYPYEERNTTCRFNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGPVSVAIEVTIAF 249

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-G 298
           + Y  G+ +  +C NT  D+ HAV+  GYG +DG  YW++KNSWG  +G  GY +M    
Sbjct: 250 QLYARGILNDPQCKNTEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYGMDGYLRMSRNA 309

Query: 299 KNMCGIATCASYPVV 313
            N CGIAT ASYPV+
Sbjct: 310 DNQCGIATRASYPVL 324


>gi|432114312|gb|ELK36240.1| Aryl hydrocarbon receptor nuclear translocator [Myotis davidii]
          Length = 897

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 687 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLMKKTGKLLNLSPQNLVDCVS--ENDG 744

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 745 CGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYKEIPEGNEKALK 804

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 805 KAVARVGPISVAIDASLSSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGKKHWII 862

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 863 KNSWGENWGNKGYILMARNKNNACGIANLASFP 895


>gi|18858809|ref|NP_571273.1| cathepsin L, 1 b precursor [Danio rerio]
 gi|1752664|emb|CAA69623.1| cathepsin L [Danio rerio]
          Length = 336

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 137/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPSGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CG+AT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|28971813|dbj|BAC65418.1| cathepsin L [Pandalus borealis]
          Length = 318

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/207 (49%), Positives = 127/207 (61%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FSTTG+LE A+    G  +SLSEQ LVDC+    N GCNGG+   
Sbjct: 116 VTPVKDQGQCGSCWAFSTTGALEGAHFLKHGDLVSLSEQNLVDCST--ENSGCNGGVVQW 173

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A++YIK N G+DTE +YPY  +D  C+F + +VG  V    +I    E     AV    P
Sbjct: 174 AYDYIKSNNGIDTESSYPYEAQDLTCRFDAAHVGATVTGYADIPYADEVTQASAVHDDGP 233

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           VSV  +   + F+ Y SGVY    C   P  +NHAV+ VGYG E+G  YWLIKNSWG  W
Sbjct: 234 VSVCIDAGHNSFQLYSSGVYYEPNC--NPSSINHAVLPVGYGTEEGSDYWLIKNSWGTGW 291

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G  GY K+   K N CG+AT + YP V
Sbjct: 292 GLSGYMKLTRNKSNHCGVATQSCYPNV 318


>gi|545734|gb|AAB30089.1| cysteine protease [Fasciola sp.]
 gi|2662308|dbj|BAA23743.1| cathepsin L [Fasciola hepatica]
          Length = 325

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 138/215 (64%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG+CGSCW FSTTG++E  Y +     IS SEQQLVDC+  + N G
Sbjct: 112 IDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY+K   GL+TE +YPYT  +G C+++ +    +V D   +  G+E EL+
Sbjct: 172 CMGGLMENAYEYLK-QFGLETESSYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELK 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG   P +VA +V   F  Y  G+Y S  C  + + VNHAV+AVGYG + G  YW++K
Sbjct: 231 NLVGAEGPAAVAVDVESDFMMYSGGIYQSRTC--SSLRVNHAVLAVGYGTQGGTDYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG +WG+  Y +M   + NMCGIA+ AS P+VA
Sbjct: 289 NSWGSSWGER-YIRMVRNRGNMCGIASLASLPMVA 322


>gi|146216000|gb|ABQ10202.1| cysteine protease Cp4 [Actinidia deliciosa]
          Length = 463

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 180/369 (48%), Gaps = 84/369 (22%)

Query: 5   VQLVSSVILLLCCAAAASA---SASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALS 61
           V+  S   LL  C A +SA   S  S+D ++P +   ++ +  +E               
Sbjct: 4   VRASSVACLLFLCFAFSSALDMSIISYDQTHPPQRTDAEAMAIYE--------------- 48

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
             ++   +GK Y ++ E + RF  F  NL  +   N    SYR+GLN             
Sbjct: 49  --KWLTTHGKAYNAIGEKERRFEIFKDNLRFVDEHNAVAGSYRVGLNRFADLTNEEYRSM 106

Query: 109 ---------------------------------------ISPVKDQGHCGSCWTFSTTGS 129
                                                  +SPVKDQG CGSCW FST  +
Sbjct: 107 FLGGNMEMKERSASTKSDRYAFRAGDKLPGSVDWREKGAVSPVKDQGQCGSCWAFSTISA 166

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           +E       G+ ISLSEQ+LVDC +++N  GCNGGL    F++I  NGG+DTEE YPY  
Sbjct: 167 VEGINQIVTGELISLSEQELVDCDKSYN-MGCNGGLMDYGFQFIINNGGIDTEEDYPYRA 225

Query: 190 KDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVY 247
            DG C    +N  V  ++   ++    E+ L+ AV   +PVSVA E     F+ Y+SGV+
Sbjct: 226 VDGTCDQFRKNARVVSINGYEDVPEDDENSLKKAVA-NQPVSVAIEAGGRAFQLYESGVF 284

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNM----CG 303
           +    G+   +++H VVAVGYG E+GV YW ++NSWG  WG++GY K+E   N     CG
Sbjct: 285 T----GHCGTNLDHGVVAVGYGTENGVDYWTVRNSWGPKWGENGYIKLERNINATSGKCG 340

Query: 304 IATCASYPV 312
           IA+ ASYP 
Sbjct: 341 IASMASYPT 349


>gi|410978262|ref|XP_003995514.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 333

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 134/219 (61%), Gaps = 9/219 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+QA  N+G
Sbjct: 118 VDWREKGYVTPVKDQGPCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSQAEGNEG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL + AF+Y+K NGGLD+EE+YPY  +D  CK+  ++         +I    E  L 
Sbjct: 178 CNGGLMNNAFQYVKDNGGLDSEESYPYHAQDESCKYKPQDSAANDTGFFDIPQ-QEKALM 236

Query: 221 HAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG----VP 275
            AV    P+SV  +     F+FY  G+Y    C +   D++H V+ +GYG E G      
Sbjct: 237 VAVATKGPISVGIDASHFTFQFYHEGIYYDPDCSSE--DLDHGVLVIGYGTEIGQSINKT 294

Query: 276 YWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           YW++KNSWG NWG  GY KM    KN CGIAT AS+PVV
Sbjct: 295 YWIVKNSWGANWGIDGYIKMAKDRKNHCGIATMASFPVV 333


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 156/303 (51%), Gaps = 65/303 (21%)

Query: 69  YGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------------- 108
           +GK Y ++ E + RF  F  NL  I   N    SY++GLN                    
Sbjct: 58  HGKAYNALGEKEKRFEIFKDNLRFIDEHNSVDRSYKVGLNRFADLTNEEYKAMFLGTKME 117

Query: 109 --------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQ 136
                                           + PVKDQG CGSCW FST G++E     
Sbjct: 118 RKNRFLGTRSQRYLFKDGDDLPENVDWREKGAVVPVKDQGQCGSCWAFSTVGAVEGINQI 177

Query: 137 AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
             G+ ISLSEQ+LVDC +++ NQGCNGGL   AFE+I  NGG+DTEE YPY   D +C  
Sbjct: 178 VTGELISLSEQELVDCDKSY-NQGCNGGLMDYAFEFIINNGGIDTEEDYPYKASDNICDP 236

Query: 197 SSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGN 254
           + +N  V  +D   ++    E+ L+ AV   +PVSVA E     F+ YKSGV++  +CG 
Sbjct: 237 NRKNAKVVTIDGYEDVPENDENSLKKAVAH-QPVSVAIEAGGRAFQLYKSGVFTG-RCG- 293

Query: 255 TPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIATCAS 309
              +++H VVAVGYG E+GV YW+++NSWG  WG+ GY +ME          CGIA   S
Sbjct: 294 --TELDHGVVAVGYGTENGVNYWIVRNSWGSAWGESGYIRMERNVANTKTGKCGIAIQPS 351

Query: 310 YPV 312
           YP 
Sbjct: 352 YPT 354


>gi|296090463|emb|CBI40282.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 33/272 (12%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNIS----------------- 110
           ++GK Y ++ E + RF  F  NL  I   N    +Y++G   S                 
Sbjct: 10  KHGKSYNALGERERRFEIFKDNLRFIEEHNAVNRTYKVGDRYSFRAGEDLPESVDWREKG 69

Query: 111 ---PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPS 167
              PVKDQG+CGSCW FST  ++E     A G  ISLSEQ+LVDC +++N QGCNGGL  
Sbjct: 70  AVVPVKDQGNCGSCWAFSTIAAVEGINQIATGDLISLSEQELVDCDKSYN-QGCNGGLMD 128

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLV 226
            AFE+I  NGG+D+EE YPY   D  C  + +N  V  +D   ++    E  L+ AV   
Sbjct: 129 YAFEFIINNGGIDSEEDYPYRAADTTCDPNRKNARVVSIDGYEDVPQNDERSLKKAVAN- 187

Query: 227 RPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
           +PVSVA E     F+ Y+SGV++  +CG     ++H VVAVGYG E+ V YW+++NSWG 
Sbjct: 188 QPVSVAIEAGGRAFQLYQSGVFTG-QCG---TQLDHGVVAVGYGTENSVDYWIVRNSWGP 243

Query: 286 NWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           NWG+ GY K+E          CGIA   SYP+
Sbjct: 244 NWGESGYIKLERNLAGTETGKCGIAIEPSYPI 275


>gi|115743|sp|P07154.2|CATL1_RAT RecName: Full=Cathepsin L1; AltName: Full=Cyclic protein 2;
           Short=CP-2; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Procathepsin L;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|38648869|gb|AAH63175.1| Cathepsin L1 [Rattus norvegicus]
 gi|149029152|gb|EDL84437.1| cathepsin L, isoform CRA_a [Rattus norvegicus]
 gi|386267881|dbj|BAM14518.1| cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 134/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+    N
Sbjct: 116 KTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C  +  D++H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNC--SSKDLDHGVLVVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct: 293 DKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333


>gi|324512246|gb|ADY45078.1| Cathepsin L [Ascaris suum]
          Length = 388

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 136/209 (65%), Gaps = 7/209 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +  G  +SLSEQ LVDC++ + N GCNGGL   
Sbjct: 183 VTEVKNQGMCGSCWAFSATGALEGQHKRKIGSLVSLSEQNLVDCSRKYGNNGCNGGLMDY 242

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEYIK N G+DTE +YPY GK+  C F+ + VG +    V++  G E++L+ AV    P
Sbjct: 243 AFEYIKDNHGVDTEASYPYKGKEMKCHFNKKTVGAEDEGYVDLPEGDEEKLKIAVATQGP 302

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGE 285
           +SVA +     F+ Y+ GVY   +C +  +D  H V+ VGYG +  DG  YW++KNSWG 
Sbjct: 303 ISVAIDAGHPSFQMYRKGVYYEPQCSSESLD--HGVLVVGYGTDEIDG-DYWIVKNSWGP 359

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WG+ GY ++   + N CGIA+ ASYP+V
Sbjct: 360 GWGEKGYVRIARNRDNHCGIASKASYPIV 388


>gi|73946536|ref|XP_541257.2| PREDICTED: cathepsin L1 [Canis lupus familiaris]
          Length = 333

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 104/211 (49%), Positives = 128/211 (60%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG C  CW FS TG+LE    +  GK +SLSEQ LVDC+ +  N+GCNGGL   
Sbjct: 126 VTPVKDQGQCLGCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWSQGNRGCNGGLMEY 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+K NGGLD+EE+YPY  ++  CK+  E     V     I L  ED L   V  V P
Sbjct: 186 AFQYVKDNGGLDSEESYPYLARNEPCKYRPEKSAANVTAFWPI-LNEEDGLMTTVATVGP 244

Query: 229 VSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW 283
           VS A +     F+FYK G+Y   KC N  +  NH V+ VGYG E    D   YW++KNSW
Sbjct: 245 VSAAVDSSPQSFQFYKKGIYYDPKCSNKLL--NHGVLVVGYGFEGAESDNKKYWIVKNSW 302

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G NWG  GY  +   + N CGIAT ASYPVV
Sbjct: 303 GTNWGMQGYMLLAKDRDNHCGIATRASYPVV 333


>gi|74213650|dbj|BAE35627.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY ++   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIEIAKDRDNHCGLATAASYPVV 333


>gi|261289789|ref|XP_002611756.1| hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae]
 gi|229297128|gb|EEN67766.1| hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae]
          Length = 308

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/216 (47%), Positives = 129/216 (59%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+Q  CGSCW FS TGSLE  +       +SLSEQ LVDC++   N+G
Sbjct: 95  VDWRQKGAVTKVKNQEQCGSCWAFSATGSLEGQHFLKTNNLVSLSEQNLVDCSRREGNKG 154

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDEL 219
           C GG   QAF+YIK NGG+DTEE Y Y G+D  +C++ S   G  +    +I  G E  L
Sbjct: 155 CKGGSMDQAFKYIKMNGGIDTEECYSYRGRDESMCRYKSSCSGATLSSYTDIKTGDEMAL 214

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
             AV  V P+SVA +     F+ Y  GVY   KC +T +D  H V+AVGYG  +G  YWL
Sbjct: 215 MQAVSTVGPISVAIDAGHKSFQLYHHGVYDEPKCSSTHLD--HGVLAVGYGSSNGSDYWL 272

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WG  GY  M   K N CGIAT A YPVV
Sbjct: 273 VKNSWGTEWGMEGYIMMSRNKHNQCGIATRAIYPVV 308


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/207 (47%), Positives = 130/207 (62%), Gaps = 5/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW+FS  G++E A     G   SLSEQQL+DC+  + NQGCNGGL  Q
Sbjct: 133 VTSVKNQGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDYGNQGCNGGLMPQ 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y +   G++ E  Y YT +DGVC++  + V   V     +  G E  LQ AV  + P
Sbjct: 193 AFQYAQ-RYGVEAEVDYRYTERDGVCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGP 251

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +  D GF  Y  GV+ S  C  +P  ++H V+ VGYG E+G  YWL+KNSWG +W
Sbjct: 252 ISVGIDAADPGFMSYSHGVFVSKTC--SPYAIDHGVLVVGYGAENGDAYWLVKNSWGSSW 309

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY KM   + NMCGIA+ ASYP V
Sbjct: 310 GEDGYLKMARNRNNMCGIASMASYPTV 336


>gi|246148|gb|AAB21516.1| Cyclic Protein-2 [Rattus sp.]
          Length = 247

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 134/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+    N
Sbjct: 29  KTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGN 88

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 89  QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKA 147

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C  +  D++H V+ VGYG E    + 
Sbjct: 148 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNC--SSKDLDHGVLVVGYGYEGTDSNK 205

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct: 206 DKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 246


>gi|74142447|dbj|BAE31977.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK++G CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNKGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|189525870|ref|XP_001923796.1| PREDICTED: cathepsin L1 [Danio rerio]
          Length = 335

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPHGNQGCNGGLMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPKGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C +    ++HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACTSQ---LDHAVLVVGYGYQGADVAGNRYWIVKNS 303

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 304 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|313241067|emb|CBY33367.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 133/219 (60%), Gaps = 5/219 (2%)

Query: 97  NCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
           N   + +R    ++P+KDQG CGSCW FSTTGS E A+ +  GK ++LSEQQLVDC+   
Sbjct: 111 NPDSVDWRNEGYVTPIKDQGQCGSCWAFSTTGSTEGAHFKKTGKLVTLSEQQLVDCSTKE 170

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
            + GCNGGL    F YI  N G+ TE AYPY  +DG CK S       + +  ++  G+E
Sbjct: 171 GDHGCNGGLMDFGFTYIIENDGITTESAYPYKAQDGSCK-SGMTAAATLSECYDVAQGSE 229

Query: 217 DELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
            +L+ AV  V P+SVA +  +  FR YK G+Y    C +T +D  H V+AVGY  +    
Sbjct: 230 ADLETAVATVGPISVAIDAHLLSFRLYKQGIYHDRLCSSTRLD--HGVLAVGYKNDPSGN 287

Query: 276 YWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           YW++KNSW   WG+ GY  M +  KN CGIAT ASYPV 
Sbjct: 288 YWIVKNSWNTTWGNEGYIWMAKDKKNTCGIATAASYPVA 326


>gi|405977173|gb|EKC41636.1| Cathepsin K [Crassostrea gigas]
          Length = 942

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 152/302 (50%), Gaps = 58/302 (19%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN------------ 108
           F R Y K Y   +E K+R + + +N+D+I   N +      SYRLG+N            
Sbjct: 646 FKRIYSKTYTEQDE-KIRKSIWIQNIDIINRHNKEADMGHHSYRLGMNEFGDMTTKEVTG 704

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVK+QG+CGSCW F+TTG LE  
Sbjct: 705 MLNVPKGYATDNVSTFLPPNNLQLPETVNWTKEGYVTPVKNQGYCGSCWAFATTGGLEGQ 764

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
           + +   K +SLSEQ LVDC +   N GC GGLP  A++YI  NGG+DTEE+YPY GK+G 
Sbjct: 765 HFRKTKKLVSLSEQNLVDCCK--ENLGCTGGLPVTAYKYIARNGGIDTEESYPYLGKNGN 822

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKC 252
           C F    +G      V +  G E  LQ AV  V PV+V+ +  +  F  YK GVY   KC
Sbjct: 823 CTFRPPKIGATCQGFVRVPAGDEVGLQKAVASVGPVTVSIDASLKSFYLYKEGVYDDKKC 882

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
                  NH V+ VGYG   G  YWL+KNSWG ++G  GY  M   + N CGI+    YP
Sbjct: 883 SKKMF--NHFVLIVGYGKHLGKEYWLVKNSWGMSFGMDGYIMMARNQDNQCGISNQPVYP 940

Query: 312 VV 313
           +V
Sbjct: 941 IV 942


>gi|211953199|gb|ACJ13761.1| aleurain-like protease [Helianthus annuus]
          Length = 114

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 89/112 (79%), Positives = 100/112 (89%)

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262
           VQV+DSVNIT GAEDEL+HAVG+VRPVSVAFEV+  FR Y  GV++S  CG+ PMDVN A
Sbjct: 3   VQVIDSVNITSGAEDELKHAVGVVRPVSVAFEVIANFRLYTGGVFTSDDCGSGPMDVNRA 62

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           VVAVGYGVEDGVPYWLIKNSWG +WG +GYFKMEMGKNMCG+ATCASYP+VA
Sbjct: 63  VVAVGYGVEDGVPYWLIKNSWGADWGLNGYFKMEMGKNMCGVATCASYPIVA 114


>gi|194741252|ref|XP_001953103.1| GF17600 [Drosophila ananassae]
 gi|190626162|gb|EDV41686.1| GF17600 [Drosophila ananassae]
          Length = 333

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/321 (36%), Positives = 157/321 (48%), Gaps = 69/321 (21%)

Query: 58  HALSFAR---------FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYR 104
           HA+ +A+         F   Y K+Y+   E +LRF  F+ N  LI   N K     +S+ 
Sbjct: 17  HAVPYAQDILEEEWMAFKLEYNKVYQDETEEQLRFKIFNYNKLLIARHNLKWAAGKVSFN 76

Query: 105 LGLN-------------------------------------------------ISPVKDQ 115
           L +N                                                 ++PVKDQ
Sbjct: 77  LAVNKFADLLDHEFQDLMLGKMSPSGSNFGSSTFLPPVNLTLPDAVDWRKYGFVTPVKDQ 136

Query: 116 GHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKY 175
           G CGSCW FSTTGSLE  + +  G+ ISLSEQ L+DC+    N GC  G    AF YI+ 
Sbjct: 137 GSCGSCWAFSTTGSLEGQHFRKTGQLISLSEQNLIDCSPG--NNGCKNGAVEYAFRYIQS 194

Query: 176 NGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE- 234
           N G+DTE +YPY      C+F  + +G      V +  G E EL  AV  V P+SV    
Sbjct: 195 NKGIDTEISYPYEAAQNQCRFRRDTIGATSTGFVKLNPGDEMELAQAVATVGPISVLINS 254

Query: 235 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYF 293
            +D F+FY  GVY+   C   P  + HAV+ VGYG +D G  +WL+KNSW  +WG+ GY 
Sbjct: 255 SLDSFKFYHDGVYNDPSC--NPNKLTHAVLVVGYGTDDRGGDFWLVKNSWSTHWGEQGYV 312

Query: 294 KMEM-GKNMCGIATCASYPVV 313
           K++    N+CGIA+ A YP+V
Sbjct: 313 KIKRNANNLCGIASNALYPLV 333


>gi|46948154|gb|AAT07059.1| cathepsin F-like cysteine proteinase, partial [Brugia malayi]
          Length = 461

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 90/205 (43%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FS TG++E+ +    GK ISLSEQ+L+DC     ++GCNGGLP  
Sbjct: 260 VTPVKDQGSCGSCWAFSVTGNIESLWAIKTGKLISLSEQELIDCDVI--DKGCNGGLPIN 317

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF  IK  GGL+ E+ YPY  K+G C      + V + D+V I    E  ++  +    P
Sbjct: 318 AFREIKRMGGLEPEDQYPYEAKNGTCHLVRAQIAVSIDDAVEIPRN-ETVMKAWIAQRGP 376

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           +SV  +  +   +YKSG+   +K    P  +NH V+  GYG+E+ +PYW IKNSWGE WG
Sbjct: 377 LSVGIDA-ELLSYYKSGILHPSKSRCPPSKINHGVLITGYGIENNLPYWTIKNSWGEQWG 435

Query: 289 DHGYFKMEMGKNMCGIATCASYPVV 313
           ++GYF++  GKN+CG++   S  ++
Sbjct: 436 ENGYFQLMRGKNICGVSDLVSSAII 460


>gi|348542778|ref|XP_003458861.1| PREDICTED: digestive cysteine proteinase 3-like [Oreochromis
           niloticus]
          Length = 218

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 5/199 (2%)

Query: 117 HCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYN 176
            CGSCW FS TG+LE  + +  G  +SLSEQQLVDC++ F N GC+GG    AF+YIK N
Sbjct: 23  QCGSCWAFSATGALEGQHFKKTGNLVSLSEQQLVDCSRNFFNHGCDGGWMIPAFKYIKDN 82

Query: 177 GGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV 236
           GG+ TEE+Y Y  +DG C +++  VG Q           E+ L+ AV  + P+S+A +  
Sbjct: 83  GGIQTEESYTYEARDGRCHYNANFVGAQC-SGYGTVKQDEEALKQAVAAIGPISIAVDAS 141

Query: 237 -DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM 295
            + F+ Y+SGVY    C N  +++NHAV+AVGYG E+G  YWL+KNSWG  WG+ GY KM
Sbjct: 142 HESFQLYQSGVYDEPWCSN--INLNHAVLAVGYGTENGHDYWLVKNSWGSEWGNKGYIKM 199

Query: 296 EMGK-NMCGIATCASYPVV 313
              K N CGIAT ASYP+V
Sbjct: 200 TRNKDNQCGIATEASYPLV 218


>gi|344271939|ref|XP_003407794.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 335

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 133/212 (62%), Gaps = 11/212 (5%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG C SCW FS TG+LE    +  GK +SLSEQ LVDC++  +N GC+GGL  +
Sbjct: 128 VTPVKDQGSCHSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPESNNGCSGGLMDK 187

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K NGGLD+EE+YPYT K+   C +  E         VNI    E  L +AV  V 
Sbjct: 188 AFQYVKNNGGLDSEESYPYTAKESRNCLYKPEFSAANNTGFVNIP-PQEKALMNAVASVG 246

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP----YWLIKNS 282
           P+SVA +  +  FRFYKSG+Y    C    + VNH V+ VGYG E   P    YWL+KNS
Sbjct: 247 PISVAVDASLKSFRFYKSGIYFDPACR---LAVNHGVLVVGYGFEGTDPDKNKYWLVKNS 303

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG++WG  GY K+   + N CGIA  ASYP V
Sbjct: 304 WGKSWGADGYIKIAKDRNNHCGIARAASYPTV 335


>gi|333827692|gb|AEG19548.1| cathepsin L-like cysteine protease [Taenia pisiformis]
          Length = 338

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/253 (44%), Positives = 151/253 (59%), Gaps = 22/253 (8%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWT 123
           R A + G+++++++     FA     +D  R  N           ++ VK+QG+CGSCW 
Sbjct: 105 RVAGKCGRVWKALKS----FADLPDTVDW-RDKNL----------VTEVKNQGNCGSCWA 149

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FS+TG+LEAA  +  GK ISLSEQQLVDC+    N GCNGG  S AF+Y++ +  ++ E 
Sbjct: 150 FSSTGALEAALAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSNAFKYLE-DHSIEPES 208

Query: 184 AYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRF 241
           AYPY   DG C++ +E++GV  V D   I  G E  L  AV  V P+S+A +    GF F
Sbjct: 209 AYPYRATDGPCRY-NESLGVGTVTDIGEIPEGNETALMEAVATVGPISIAIDASSLGFMF 267

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KN 300
           Y+ G+Y S  C +  +  NH V+AVGYG  DG PYWL+KNSWG  WG  GY  M     N
Sbjct: 268 YRHGIYKSHWCSSKFL--NHGVLAVGYGKLDGKPYWLVKNSWGSGWGMKGYIMMAKDYHN 325

Query: 301 MCGIATCASYPVV 313
           MCGIA+ A +P V
Sbjct: 326 MCGIASLADFPYV 338


>gi|41323856|gb|AAS00027.1| cathepsin L-like cysteine proteinase [Taenia solium]
          Length = 339

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 7/208 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG+CGSCW FS+TG+LE A+ +  GK ISLSEQQLVDC+    N GCNGG  S 
Sbjct: 136 VTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSY 195

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y++ +  ++ E AYPY   DG C++ +E++GV  V D  +I  G E  L  AV  V 
Sbjct: 196 AFKYLEEH-FIEPESAYPYRATDGPCRY-NESLGVGTVTDIGDIPEGNETALMEAVATVG 253

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           P+S+A +    GF FY+ G+Y S  C +  +  NH V+A+GYG +DG PYWL+KNSWG  
Sbjct: 254 PISIAIDASSLGFMFYRHGIYKSHWCSSKFL--NHGVLAIGYGKQDGKPYWLVKNSWGTR 311

Query: 287 WGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WG  GY  M     NMCG+A+ A +P V
Sbjct: 312 WGMKGYIMMAKDYHNMCGVASLADFPYV 339


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/330 (36%), Positives = 162/330 (49%), Gaps = 63/330 (19%)

Query: 42  LRDFETSVLQ-VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG 100
           +R +  SVL  V+       +F  F   +GK YE  +E  LR   F +NL  I   N + 
Sbjct: 145 MRLYIASVLALVVAVGADLTNFEHFKEHFGKTYEG-DEHALRQGIFQRNLAHIEKFNAEK 203

Query: 101 LSYR---------------------LGLN------------------------------- 108
            + R                     LGL                                
Sbjct: 204 AASRGYTLGITQFADMSTAEFRQTYLGLRMNASTIAKLRKLQREVVADDRDLPEAVDWRD 263

Query: 109 ---ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              +SPVKDQG CGSCW FST+G++E  +    G+ +SLSEQQ+VDC  ++ + GCNGG 
Sbjct: 264 KGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSLSEQQMVDC--SWLDFGCNGGQ 321

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
           P  A EY+++NGGL+ E AYPY G  G C    ++   ++         +E  LQ AV  
Sbjct: 322 PMLAMEYVRFNGGLELETAYPYKGVGGSCHSDKKSAAAKITGFWMAGFYSESALQKAVAK 381

Query: 226 VRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWG 284
           V P+SV  +   + F+ YKSG+Y+   C +  +D  HAV+AVGYG  D   YWL+KNSW 
Sbjct: 382 VGPISVGMDASGEDFQHYKSGIYNPESCSSIGLD--HAVLAVGYGTSDDGDYWLVKNSWN 439

Query: 285 ENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            +WG+ GYFK+   K N CGIAT   YP V
Sbjct: 440 TSWGEKGYFKLPRNKGNKCGIATTPIYPTV 469


>gi|443694581|gb|ELT95681.1| hypothetical protein CAPTEDRAFT_173171 [Capitella teleta]
          Length = 342

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 100/208 (48%), Positives = 126/208 (60%), Gaps = 6/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS+TGSLE  + +  G+ +SLSEQ LVDC + + N GCNGG    
Sbjct: 136 VTPVKNQGACGSCWAFSSTGSLEGQHFRLTGQLVSLSEQNLVDCTKKYGNAGCNGGWMDN 195

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKF--SSENVGVQVLDSVNITLGAEDELQHAVGLV 226
           AF Y+K N G+DTE  YPY G D  C +  S  + G      V++  G E  L+ AV  V
Sbjct: 196 AFNYVKANNGIDTEAFYPYEGHDDWCGYDGSPGHKGANCTGHVDVQQGDELALKQAVATV 255

Query: 227 RPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
            PVSV  +     F+ YKSG+Y    C N+  D  HAV+ VGYG + G  YWL+KNSWG 
Sbjct: 256 GPVSVGIDATHRSFQLYKSGIYDEVACSNSSTD--HAVLVVGYGSQGGHDYWLVKNSWGT 313

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPV 312
           +WG  GY  M   K N C IA+ ASYP 
Sbjct: 314 SWGMDGYIMMSRNKGNQCAIASYASYPT 341


>gi|355567871|gb|EHH24212.1| Cathepsin L1 [Macaca mulatta]
          Length = 333

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y+  NGGLD+EEAYPY   +  CK++ E         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVADNGGLDSEEAYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|363807062|ref|NP_001242584.1| uncharacterized protein LOC100804015 precursor [Glycine max]
 gi|255640677|gb|ACU20623.1| unknown [Glycine max]
          Length = 366

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 141/218 (64%), Gaps = 12/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R+   ++P+KDQG CGSCW FST  ++EA      GK +SLSEQ+LVDC +A+ N+G
Sbjct: 132 VDWRMKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAY-NEG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AFE+I  NGG+DT++ YPY G DG+C  + +N  V  +D   ++    E+ L
Sbjct: 191 CNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKVVNIDGYEDVPPYDENAL 250

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVSVA E      + Y+SGV++  KCG +   ++H VV VGYG E+GV YWL
Sbjct: 251 KKAVAH-QPVSVAIEASGRALQLYQSGVFTG-KCGTS---LDHGVVVVGYGSENGVDYWL 305

Query: 279 IKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 312
           ++NSWG  WG+ GYFKM+         CGI   ASYPV
Sbjct: 306 VRNSWGTGWGEDGYFKMQRNVRTSTGKCGITMEASYPV 343


>gi|313235898|emb|CBY11285.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 132/219 (60%), Gaps = 5/219 (2%)

Query: 97  NCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
           N   + +R    ++P+KDQG CGSCW FSTTGS E A+ +  GK + LSEQQLVDC+   
Sbjct: 111 NPDAVDWRPQGYVTPIKDQGQCGSCWAFSTTGSTEGAHFKKTGKLVMLSEQQLVDCSTKE 170

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
            + GCNGGL    F YI  N G+ TE AYPY  +DG CK S       + +  ++  G+E
Sbjct: 171 GDHGCNGGLMDFGFTYIIENDGITTESAYPYKAQDGSCK-SGMTAAATLSECYDVAQGSE 229

Query: 217 DELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
            +L+ AV  V P+SVA +  +  FR YK G+Y    C +T +D  H V+AVGY  +    
Sbjct: 230 ADLETAVATVGPISVAIDAHLLSFRLYKQGIYHDRLCSSTRLD--HGVLAVGYKNDPSGN 287

Query: 276 YWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           YW++KNSW   WG+ GY  M +  KN CGIAT ASYPV 
Sbjct: 288 YWIVKNSWNTTWGNEGYIWMAKDKKNTCGIATAASYPVA 326


>gi|30017423|ref|NP_835199.1| testin-2 precursor [Mus musculus]
 gi|81895036|sp|Q80UB0.1|TEST2_MOUSE RecName: Full=Testin-2; Contains: RecName: Full=Testin-1; Flags:
           Precursor
 gi|29289939|gb|AAN63093.1| testin precursor [Mus musculus]
 gi|38173997|gb|AAH61218.1| RIKEN cDNA 4930486L24 gene [Mus musculus]
          Length = 333

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 135/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R+   ++PVK+QG+C S W FS TGSLE    +  G+ + LSEQ L+DC  +   
Sbjct: 116 KYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVT 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
             C+GG    AF+Y+K NGGL TEE+YPY G    C++ +EN    V D V I  G E+ 
Sbjct: 176 HDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDFVQIP-GREEA 234

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   D F+FY SG+Y   +C    + +NHAV+ VGYG E    DG
Sbjct: 235 LMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDG 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY K+     N CGIAT A+YP+V
Sbjct: 293 NSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 333


>gi|332384364|gb|AEE69034.1| cysteine protease [Taenia pisiformis]
          Length = 338

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/253 (44%), Positives = 151/253 (59%), Gaps = 22/253 (8%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWT 123
           R A + G+++++++     FA     +D  R  N           ++ VK+QG+CGSCW 
Sbjct: 105 RVAGKCGRVWKALKS----FADLPDTVDW-RDKNL----------VTEVKNQGNCGSCWA 149

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FS+TG+LEAA  +  GK ISLSEQQLVDC+    N GCNGG  S AF+Y++ +  ++ E 
Sbjct: 150 FSSTGALEAALAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSNAFKYLE-DHSIEPES 208

Query: 184 AYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRF 241
           AYPY   DG C++ +E++GV  V D   I  G E  L  AV  V P+S+A +    GF F
Sbjct: 209 AYPYRATDGPCRY-NESLGVGTVTDIGEIPEGNETALMEAVATVGPISIAIDASSLGFMF 267

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KN 300
           Y+ G+Y S  C +  +  NH V+AVGYG  DG PYWL+KNSWG  WG  GY  M     N
Sbjct: 268 YRHGIYKSHWCSSKFL--NHGVLAVGYGKLDGKPYWLVKNSWGSGWGMKGYIMMAKDYHN 325

Query: 301 MCGIATCASYPVV 313
           MCGIA+ A +P V
Sbjct: 326 MCGIASLADFPYV 338


>gi|84660246|emb|CAI43320.1| cathepsin L [Lubomirskia baicalensis]
 gi|85677150|emb|CAI46307.1| cathepsin L [Lubomirskia baicalensis]
          Length = 327

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/259 (44%), Positives = 146/259 (56%), Gaps = 11/259 (4%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNL-DLIRSTNCKGLSYRLGLNISPVKDQGHC 118
           L  + F R Y          K +   FS  + DL  S     + +R    ++ +K+QG C
Sbjct: 75  LESSEFGRLYNGYNNKPSMKKAQSKVFSTKVGDLPTS-----VDWRTKGFVTAIKNQGQC 129

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FS    LE  +  A G  +SLSEQ LVDC+ A  NQGCNGGL   AF+Y+  NGG
Sbjct: 130 GSCWAFSAVAGLEGQHFNATGTLVSLSEQNLVDCSTAEGNQGCNGGLMDNAFQYVIKNGG 189

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNI-TLGAEDELQHAVGLVRPVSVAFEVVD 237
           +DTE +YPY   D  CKF++ NVG       +I    +E  LQ AV +V P+SVA +   
Sbjct: 190 IDTEASYPYKAVDQKCKFNAANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASH 249

Query: 238 -GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME 296
             F+ YKSGVYS + C  T +D  H V AVGY    GV YW++KNSWG  WG  GY  M 
Sbjct: 250 TSFQLYKSGVYSESACSQTSLD--HGVTAVGYDSSSGVAYWIVKNSWGTTWGQAGYIWMS 307

Query: 297 MGK-NMCGIATCASYPVVA 314
             K N CGIAT ASYP+V+
Sbjct: 308 RNKNNQCGIATAASYPIVS 326


>gi|148709357|gb|EDL41303.1| RIKEN cDNA 4930486L24 [Mus musculus]
          Length = 334

 Score =  193 bits (490), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 135/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R+   ++PVK+QG+C S W FS TGSLE    +  G+ + LSEQ L+DC  +   
Sbjct: 117 KYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVT 176

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
             C+GG    AF+Y+K NGGL TEE+YPY G    C++ +EN    V D V I  G E+ 
Sbjct: 177 HDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDFVQIP-GREEA 235

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   D F+FY SG+Y   +C    + +NHAV+ VGYG E    DG
Sbjct: 236 LMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDG 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY K+     N CGIAT A+YP+V
Sbjct: 294 NSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 334


>gi|149755237|ref|XP_001495795.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 339

 Score =  193 bits (490), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 102/220 (46%), Positives = 136/220 (61%), Gaps = 8/220 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+ A  N
Sbjct: 116 KSVDWRKKGYVTPVKNQGLCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GC+GGL   AF+Y+K NGGLD+E++YPY  +DG CK+  E         ++I    E  
Sbjct: 176 EGCSGGLMDYAFQYVKDNGGLDSEKSYPYLAEDGFCKYKPEYSAANDTGFLDIQQ-QEKF 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DGV 274
           L  AV  V P+S   +  ++ F+FYK G+Y    C +  +D  H V+ VGYG E      
Sbjct: 235 LMEAVATVGPISAGIDASLESFQFYKEGIYYDPDCSSKYLD--HGVLVVGYGFEGKDSRN 292

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YWL+KNSWGE+WG +GY KM   + N CGIAT ASYP +
Sbjct: 293 KYWLVKNSWGEDWGMNGYIKMAKDRENHCGIATMASYPSL 332


>gi|15593249|gb|AAL02221.1|AF410881_1 cysteine protease CP10 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 136/219 (62%), Gaps = 6/219 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++P+KDQG CGSCW+FS TGSLE          +SLSEQ LVDC+  F N
Sbjct: 118 KKVDWRSKGAVTPIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGN 177

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL   AFEY++ NGG+DTEE+YPYT  DG  C + + N         ++   +E 
Sbjct: 178 EGCNGGLMDSAFEYVESNGGIDTEESYPYTAVDGDSCLYKAANNAGVNTGYKDVQAKSES 237

Query: 218 ELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVP 275
            L+ AV    PVSVA +  +  F+ Y SG+Y  + C +  +D  H V+AVGYG E     
Sbjct: 238 ALRDAVEKAGPVSVAIDASNWSFQMYSSGIYYESACSSDYLD--HGVLAVGYGSEWPNKE 295

Query: 276 YWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           +W++KNSWG +WG+ GY KM    KN CGIAT ASYP+V
Sbjct: 296 FWIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 334


>gi|307141900|gb|ADN34745.1| putative cysteine peptidase [Echinococcus granulosus]
          Length = 218

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/211 (48%), Positives = 128/211 (60%), Gaps = 6/211 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+KDQG CGSCW FS TG+LE    +  GK ISLSEQQLVDC+    N+G
Sbjct: 11  IDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKKGKLISLSEQQLVDCSTDMGNEG 70

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG  + AF Y   NG  ++E  YPYT  DG CKF+S  V  +V   V +    ED+L+
Sbjct: 71  CNGGYMNDAFRYWMQNGA-ESESDYPYTAMDGKCKFNSSKVVTKVSKFVKVPKKREDQLK 129

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWL 278
            +V  V PVSVA +    GF  YK G+Y    C    +D  HAV+ VGY  +  G  YW+
Sbjct: 130 LSVAQVGPVSVAIDAASSGFMLYKKGIYQDNTCSQQYLD--HAVLVVGYDADMAGQKYWI 187

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
           +KNSWGE+WG  GY  M   K NMCGIAT A
Sbjct: 188 VKNSWGEDWGQRGYIWMARDKGNMCGIATMA 218


>gi|74222595|dbj|BAE38161.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +      +FY  G+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPISVAMDASHPSLQFYSLGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct: 293 NKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|47076309|emb|CAD89795.1| putative cathepsin L protease [Meloidogyne incognita]
          Length = 383

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 134/211 (63%), Gaps = 8/211 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLP 166
           ++ VK+QG CGSCW FS TG+LE  + +  G  +SLSEQ L+DC   + + N GCNGGL 
Sbjct: 175 VTSVKNQGMCGSCWAFSATGALEGQHSRKLGTLVSLSEQNLIDCTKGEPYGNMGCNGGLM 234

Query: 167 SQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGL 225
             AF+YI+ N G+DTE +YPY  K+G  C F   NVG      V++  G ED+L+ AV  
Sbjct: 235 DNAFQYIEDNKGVDTENSYPYKAKNGKKCLFKRSNVGATDTGYVDLPSGDEDKLKIAVAT 294

Query: 226 VRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSW 283
             P+SVA +     F+ Y  GVY    C  +P ++ H V+ VGYG +D    YWL+KNSW
Sbjct: 295 QGPISVAIDAGHRSFQLYAHGVYDEEAC--SPDNLGHGVLVVGYGTDDIHGDYWLVKNSW 352

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           GE+WG++GY +M   K N CGIA+ ASYP+V
Sbjct: 353 GEHWGENGYIRMSRNKDNQCGIASKASYPLV 383


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/207 (47%), Positives = 130/207 (62%), Gaps = 5/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW+FS  G++E A     G   SLSEQQL+DC+  + NQGCNGGL  Q
Sbjct: 133 VTSVKNQGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDYGNQGCNGGLMPQ 192

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y +   G++ E  Y YT +DGVC++  + V   V     +  G E  LQ AV  + P
Sbjct: 193 AFQYAQ-RYGVEAEVDYRYTERDGVCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGP 251

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SV  +  D GF  Y  GV+ S  C  +P  ++H V+ VGYG E+G  YWL+KNSWG +W
Sbjct: 252 ISVGIDAADPGFMSYSHGVFVSKTC--SPYAIDHGVLVVGYGAENGEAYWLVKNSWGSSW 309

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY KM   + NMCGIA+ ASYP V
Sbjct: 310 GEGGYVKMARNRNNMCGIASMASYPTV 336


>gi|218478062|dbj|BAH03397.1| cathepsin L-like cysteine peptidase [Taenia asiatica]
          Length = 338

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/208 (48%), Positives = 136/208 (65%), Gaps = 7/208 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG+CGSCW FS+TG+LE A+ +  GK ISLSEQQLVDC+    N GCNGG  S 
Sbjct: 135 VTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSY 194

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y++ +  ++ E AYPY   DG C++ +E++GV  V D  +I  G E  L  AV  V 
Sbjct: 195 AFKYLEEH-SIEPESAYPYRATDGPCRY-NESLGVGTVTDIGDIPEGNETALMEAVATVG 252

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           P+S+A +    GF FY+ G+Y S  C +  +  NH V+A+GYG ++G PYWL+KNSWG  
Sbjct: 253 PISIAIDASSLGFMFYRHGIYKSHWCSSKFL--NHGVLAIGYGKQEGKPYWLVKNSWGTR 310

Query: 287 WGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WG  GY  M     NMCG+A+ A +P V
Sbjct: 311 WGMKGYIMMAKDYHNMCGVASLADFPYV 338


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/232 (43%), Positives = 140/232 (60%), Gaps = 11/232 (4%)

Query: 87  SKNLDLIRSTNCKG-----LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
           S+N D +   + +G     + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK 
Sbjct: 100 SRNNDTLYIPDWEGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKL 159

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++    
Sbjct: 160 LNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGK 217

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVN 260
             +      I +G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++N
Sbjct: 218 AAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLN 275

Query: 261 HAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           HAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 276 HAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|186688053|gb|ACC86112.1| cathepsin K [Paralichthys olivaceus]
          Length = 330

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 139/235 (59%), Gaps = 7/235 (2%)

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG 141
           R  +F+  LD   S   K + YR    ++PVK+QG CGSCW FS+ G+LE    +  G+ 
Sbjct: 100 RQRSFTMALDERVSKLPKFVDYRKEGMVTPVKNQGSCGSCWAFSSAGALEGQLAKKTGQL 159

Query: 142 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV 201
           + LS Q  VDC     N GC GG  + AF+Y++ NGG+D+EEAYPY G+D  C+++S  +
Sbjct: 160 MDLSPQNPVDCVT--ENNGCGGGYMTNAFQYVQENGGIDSEEAYPYVGEDQSCRYNSSGM 217

Query: 202 GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVN 260
             Q      + +G E  L  A+  V PVSV  +     F+FY+ GVY    C     D+N
Sbjct: 218 AAQCKGYKEVPVGDEHALAVALFKVGPVSVGIDASQSSFQFYQRGVYYDRNCNKD--DIN 275

Query: 261 HAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           HAV+AVGYG+   G  YW+IKNSW ENWG  GY  M   + N+CGIA  ASYP++
Sbjct: 276 HAVLAVGYGISSKGKKYWIIKNSWSENWGKKGYILMARNRDNLCGIANLASYPIM 330


>gi|431917800|gb|ELK17041.1| Cathepsin L1 [Pteropus alecto]
          Length = 334

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/220 (46%), Positives = 134/220 (60%), Gaps = 10/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS TGSLE    +  GK +SLSEQ LVDC+++  N+G
Sbjct: 118 VDWRQKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGKLVSLSEQNLVDCSRSQGNEG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL   AF+YIK NGGLD+EE+YPY  K+   C +  E         V+I    E  L
Sbjct: 178 CNGGLMDNAFQYIKDNGGLDSEESYPYLAKESDTCNYKPEYSAANDTGFVDIPQ-REKSL 236

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP--- 275
             AV  V P+SVA +     F+FY  G+Y    C  +  D++H V+ +GYG E G P   
Sbjct: 237 MKAVATVGPISVAIDAGHSSFQFYNKGIYYEPDC--SSKDLDHGVLVIGYGSEGGDPKSN 294

Query: 276 -YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 295 KFWIVKNSWGPEWGMNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|355753449|gb|EHH57495.1| Cathepsin L1 [Macaca fascicularis]
          Length = 333

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|19698255|dbj|BAB86770.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 136/215 (63%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    +SP+K+QG CGSCW+FS TG+LE+      G   SLSEQQLVDC+ ++ N G
Sbjct: 114 VDWRTSGCVSPIKNQGQCGSCWSFSATGALESQTCLRRGYLPSLSEQQLVDCSGSYGNYG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT-LGAEDEL 219
           CNGG P QAF+YI+ NGG+D+E  YPY  + G C ++S           ++T +G+E  L
Sbjct: 174 CNGGWPDQAFQYIQANGGIDSESYYPYQARVGTCHYNSAYSAATCSGYQDVTPVGSESAL 233

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           Q+ V  V P+S+A +   G++ Y+SGV++   C  T    +HAV+ VGYG  +G  YWL+
Sbjct: 234 QYYVANVGPLSIAID-ASGWQSYQSGVFNDPSCSQT---ADHAVLLVGYGTYNGQDYWLV 289

Query: 280 KNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           KNSWG  WG+ GY  M     N CGIA  ASYP+V
Sbjct: 290 KNSWGTWWGEQGYIMMTRNANNQCGIANHASYPLV 324


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 128 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 185

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 186 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALK 245

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 246 RAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 303

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 304 KNSWGENWGNKGYILMARNKNNACGIANLASFP 336


>gi|410990008|ref|XP_004001242.1| PREDICTED: cathepsin L1 isoform 1 [Felis catus]
          Length = 333

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 135/219 (61%), Gaps = 9/219 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG+C  CW FS TG+LE    +  GK +SLSEQ LVDC+Q   N+G
Sbjct: 118 VDWREKGYVTPVKDQGYCLCCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSQTEGNEG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
            +GGL   AF+Y+K NGGLD+EE+YPY  +   CK+  EN    V D  +I    E+EL 
Sbjct: 178 YSGGLIDDAFQYVKDNGGLDSEESYPYHAQGDSCKYRPENSVANVTDYWDIP-SKENELM 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVP 275
             +  V P+S A +  +D FRFYK G+Y    C +   DV+H V+ VGYG +    +   
Sbjct: 237 ITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSE--DVDHGVLVVGYGADGTETENKK 294

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           YW+IKNSWG +WG  GY KM   + N CGIA+ AS+P V
Sbjct: 295 YWIIKNSWGTDWGMDGYIKMAKDRDNHCGIASLASFPTV 333


>gi|1705639|sp|Q10991.1|CATL1_SHEEP RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
          Length = 217

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 129/208 (62%), Gaps = 6/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVD ++   NQGCNGGL   
Sbjct: 13  VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDN 72

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+YIK NGGLD+EE+YPY   D  C +  E    +    V+I    E  L  AV  V P
Sbjct: 73  AFQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDIPQ-REKALMKAVATVGP 131

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           +SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E     +W++KNSWG  
Sbjct: 132 ISVAIDAGHSSFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPE 189

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY KM   + N CGIAT ASYP V
Sbjct: 190 WGNKGYVKMAKDQNNHCGIATAASYPTV 217


>gi|156739289|ref|NP_001096592.1| uncharacterized protein LOC569326 precursor [Danio rerio]
 gi|156230119|gb|AAI52283.1| Im:6910535 protein [Danio rerio]
          Length = 335

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGG+  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGIMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPRGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C +    ++HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACTSR---LDHAVLVVGYGYQGADVAGNRYWIVKNS 303

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 304 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|340370384|ref|XP_003383726.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 337

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSC+ FS  G+LE A   A  K + LSEQ +VDC+  + N+G
Sbjct: 125 VDWRTKNAVTGVKDQGQCGSCYAFSAVGALEGAQALAHDKLVHLSEQNIVDCSIPYGNKG 184

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG   ++F YI  N G+D E+ Y YTG+ G CKF  + +G + +  ++I  G+E ELQ
Sbjct: 185 CNGGNMYESFRYIIDNDGIDREDGYKYTGRQGQCKFDRKAIGGRQVGIIHIPTGSEAELQ 244

Query: 221 HAVGLVRPVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            A+    PVSVA +   + FRFY+ GV+    C  T +   HA + +GYG + G PYWL+
Sbjct: 245 SALATAGPVSVAIDGSSNAFRFYEKGVFDEPNCSTTKL--THAGLIIGYGKKKGKPYWLV 302

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG +WG  GY  M   K N CGIAT AS+P +
Sbjct: 303 KNSWGPHWGMKGYIMMARNKANQCGIATAASFPTL 337


>gi|334332714|ref|XP_001367224.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 335

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/271 (42%), Positives = 151/271 (55%), Gaps = 25/271 (9%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGL------------- 107
           SF     ++G +  S EE K     +  N    R+   KG  YR  L             
Sbjct: 72  SFQLRMNKFGDM--STEEFKQVMNGYKSNGSQKRT---KGSLYRESLLAQLPESVDWREK 126

Query: 108 -NISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLP 166
             ++PVK+Q  C SCW FS  G++E  + +  GK +SLS Q LVDC+    N GC+GGL 
Sbjct: 127 GYVTPVKEQRGCYSCWAFSAAGAIEGQWFRKTGKLVSLSVQNLVDCSIPEGNNGCDGGLM 186

Query: 167 SQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLV 226
             AF+Y++ NGG+DTEE YPY  +D  CK+  E  G  V   V I    E  L  AV  V
Sbjct: 187 GNAFQYVQDNGGIDTEECYPYVAQDNECKYQPECSGANVTGFVKIPSTDERALMKAVANV 246

Query: 227 RPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSW 283
            P+SVA +  +  F+FY+SGVY   +C ++ +  NH V+ VGYG E  +G  YW++KNSW
Sbjct: 247 GPISVAIDAGNPSFKFYQSGVYYDPQCSSSQL--NHGVLVVGYGSEGKNGRKYWIVKNSW 304

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           GENWGD+GY  M   + N CGI T ASYP+V
Sbjct: 305 GENWGDNGYVLMAKDEDNHCGIITDASYPIV 335


>gi|118136313|gb|ABK62794.1| cathepsin L-like cysteine protease [Neobenedenia melleni]
 gi|118136315|gb|ABK62795.1| cathepsin L-like cysteine protease [Neobenedenia melleni]
          Length = 335

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 129/209 (61%), Gaps = 5/209 (2%)

Query: 108 NISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPS 167
           +++ VK+Q  CGSCW FS+TGS+E A  +A GK IS SEQQLVDC+ AF N GCNGG+  
Sbjct: 129 HVTAVKNQAQCGSCWAFSSTGSIEGAVKRATGKLISFSEQQLVDCSTAFGNHGCNGGIMD 188

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
            +F Y+ +N GL++E +YPY  +   C++        +    +++   E +L+ AVGLV 
Sbjct: 189 NSFNYLIHNKGLESEASYPYEAQKKECRYKKALSKGTISSFTDVSQFDEKDLKRAVGLVG 248

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWLIKNSWGE 285
           PVS+A +     F  Y SGVY    C  T +  NH V+AVGYG   +G+ YW +KNSW  
Sbjct: 249 PVSIAIDASQFSFHLYDSGVYDEEDCSQTML--NHGVLAVGYGTTPEGLDYWKVKNSWTN 306

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WG  GY  M   K N CG+AT ASYP+V
Sbjct: 307 TWGMEGYILMSRNKDNQCGVATVASYPIV 335


>gi|326932936|ref|XP_003212567.1| PREDICTED: counting factor associated protein D-like [Meleagris
           gallopavo]
          Length = 573

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  + RR+G+ Y S  E++ R   F  N+  + S N   LSY L LN             
Sbjct: 270 FHHYRRRFGRHYGSARELEHRQRIFVHNMRFVHSKNRAALSYSLALNHLADRTPQEMAAM 329

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F+TTG++E 
Sbjct: 330 RGRRRSGDPNHGLPFPAEHYAGIILPESLDWRLYGAVTPVKDQAVCGSCWSFATTGAMEG 389

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           A     G    LS+Q L+DC+  F N  C+GG   +A+E+IK +GG+ + E+Y  Y G++
Sbjct: 390 ALFLKTGVLTPLSQQVLIDCSWGFGNYACDGGEEWRAYEWIKKHGGIASTESYGTYKGQN 449

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSST 250
           G+C ++   +  ++   VN+T G    ++ A+    PV+V+ +     F FY +G+Y   
Sbjct: 450 GLCHYNQSEMLAKITGYVNVTSGNITAVKTAIYKHGPVAVSIDASHKTFSFYSNGIYYEP 509

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           KC N    ++HAV+AVGYGV  G  YWLIKNSW   WG+ GY  M M  N CG+AT A+Y
Sbjct: 510 KCANKSGQLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNDGYILMAMKDNNCGVATEATY 569

Query: 311 PVVA 314
           P++A
Sbjct: 570 PILA 573


>gi|75067394|sp|Q9GKL8.1|CATL1_CERAE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|11493685|gb|AAG35605.1|AF201700_1 cysteine protease [Chlorocebus aethiops]
          Length = 333

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|354502591|ref|XP_003513367.1| PREDICTED: cathepsin L1-like isoform 1 [Cricetulus griseus]
          Length = 330

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 133/218 (61%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG C SCW FS  GSLE    +  GK + LSEQ LVDC+++ +N
Sbjct: 116 KSVDWRKHGYVTPVKDQGSCVSCWAFSAVGSLEGQMFRKTGKLVPLSEQNLVDCSRSQHN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL + AF+YIK NGGLDT E+YPY  +DG C++  ++    +   V +    E+ 
Sbjct: 176 NGCHGGLFTSAFQYIKDNGGLDTSESYPYEAQDGPCRYDPKHSAANITGFV-VVPSNEEA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L  AV  V P+S+   V +    FYKSG Y    C N     NH+V+ VGYG E DG  Y
Sbjct: 235 LMKAVATVGPISIGISVRLRSLLFYKSGFYYDPDCYN--HYPNHSVLLVGYGEESDGQKY 292

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE WG  GY K+   + N C IAT A+YP V
Sbjct: 293 WLVKNSWGEEWGMDGYIKIAKDRNNHCSIATIAAYPTV 330


>gi|334332718|ref|XP_001367502.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 156/308 (50%), Gaps = 59/308 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN------------------------ 97
           + ++  ++GK YE+ E+  LR AT+ KNL +I   N                        
Sbjct: 29  WHQWKAQHGKSYEANED-SLRRATWEKNLKMIERHNQEYSAGKHSFQLRMNKFGDMSTEE 87

Query: 98  ----------------CKGLSYRLGL--------------NISPVKDQGHCGSCWTFSTT 127
                            KG  YR  L               ++PVK+QG CG+CW+FS  
Sbjct: 88  FKQVMNGYKSNGSQRRTKGSLYRESLLAQLPESVDWREKGYVTPVKEQGDCGACWSFSAV 147

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G++E  + +  GK +SLS Q L+DC     N GC+GG    AF+Y++ NGG+DTEE YPY
Sbjct: 148 GAIEGQWFRKTGKLVSLSIQNLIDCTIPEGNNGCDGGFMDNAFQYVQDNGGIDTEECYPY 207

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGV 246
             +D  CK+  E  G  +   V+I    E  L  AV  V P+SV  +  +  F+FY+SGV
Sbjct: 208 VAQDTECKYKPECSGANITGFVDIPSMDERALMEAVATVGPISVGIDSANPSFKFYQSGV 267

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIA 305
           Y    C ++ +D  H V+ VGYG      YW++KNSWGE WGD+GY  M   K N CGIA
Sbjct: 268 YYEPDCSSSQLD--HGVLVVGYGSIGKDEYWIVKNSWGEAWGDNGYILMAKDKDNHCGIA 325

Query: 306 TCASYPVV 313
           T ASYP V
Sbjct: 326 TEASYPKV 333


>gi|156739281|ref|NP_001096588.1| cathepsin L1-like precursor [Danio rerio]
 gi|166158351|ref|NP_001107526.1| uncharacterized protein LOC100135391 precursor [Xenopus (Silurana)
           tropicalis]
 gi|326672305|ref|XP_003199634.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|156230096|gb|AAI52237.1| MGC174155 protein [Danio rerio]
 gi|163916362|gb|AAI57707.1| LOC100135391 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGG+  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGIMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPRGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C +    ++HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACTSR---LDHAVLVVGYGYQGADVAGNRYWIVKNS 303

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 304 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|326672302|ref|XP_003199633.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|157423549|gb|AAI53506.1| Im:6910535 [Danio rerio]
          Length = 335

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGG+  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGIMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPKGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C +    ++HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACTSR---LDHAVLVVGYGYQGADVAGNRYWIVKNS 303

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 304 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|357167196|ref|XP_003581047.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 338

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 151/316 (47%), Gaps = 68/316 (21%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------- 108
           ARH     ++  RYG++Y  V E   R   F  N+  I S N     + L  N       
Sbjct: 31  ARHE----QWMARYGRVYSDVAEKARRLEVFKANVGFIESVNAGNHKFWLEANQFADITK 86

Query: 109 ---------------------------------------------ISPVKDQGHCGSCWT 123
                                                        ++PVKDQG CG CW 
Sbjct: 87  DEFRAMHKGYKMQVIGSKARATGFRYANVSIDDLPASVDWRANGAVTPVKDQGQCGCCWA 146

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FST  S+E     + GK ISLSEQ+LVDC     N+GC GGL   AFE+I  NGGLDTE 
Sbjct: 147 FSTVASMEGIVKVSTGKLISLSEQELVDCDVGMQNKGCGGGLMDNAFEFIVNNGGLDTEA 206

Query: 184 AYPYTGKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRF 241
            YPYTG DG C  + E N+   +    ++    E  LQ AV   +PVS+A +  D  FRF
Sbjct: 207 DYPYTGADGTCNSNKESNIAASIKGYEDVPANDEASLQKAVA-AQPVSIAVDGGDDLFRF 265

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG-- 298
           YK GV +   CG    +++H V AVGYGV  DG  YWL+KNSWG +WG+ G+ ++E    
Sbjct: 266 YKGGVLTGA-CGT---ELDHGVAAVGYGVAGDGTKYWLVKNSWGTSWGEDGFIRLERDVA 321

Query: 299 --KNMCGIATCASYPV 312
               MCG+A   SYP 
Sbjct: 322 DEAGMCGLAMKPSYPT 337


>gi|171702831|dbj|BAG16371.1| cysteine protease [Brassica oleracea var. italica]
          Length = 441

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 156/306 (50%), Gaps = 61/306 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           +  +  ++GK   S+ E   RF  F  NL  I   N K LSYRLGL              
Sbjct: 42  YEEWLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSM 101

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++ VKDQG CGSCW FST G++E 
Sbjct: 102 YLGSRLKRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEG 161

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
                 G  I+LSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DTEE YPY G DG
Sbjct: 162 INKIVTGDLITLSEQELVDCDTSYN-EGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDG 220

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  + +N  V  +D   ++   +E+ L+ A+   +P+SVA E     F+ Y SG++   
Sbjct: 221 RCDQTRKNAKVVTIDLYEDVPANSEESLKKALSH-QPISVAIEGGGRAFQLYDSGIFDGI 279

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIAT 306
            CG    D++H VVAVGYG E+G  YW++KNSWG +WG+ GY +ME         CGIA 
Sbjct: 280 -CGT---DLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIASSAGKCGIAV 335

Query: 307 CASYPV 312
             SYP+
Sbjct: 336 EPSYPI 341


>gi|156739275|ref|NP_001096585.1| cathepsin L1-like precursor [Danio rerio]
 gi|156230123|gb|AAI52285.1| MGC174857 protein [Danio rerio]
          Length = 335

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGG+  Q
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGIMDQ 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPRGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C +    ++HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACTSR---LDHAVLVVGYGYQGADVAGNRYWIVKNS 303

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CGIAT ASYP++
Sbjct: 304 WSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|328866326|gb|EGG14711.1| hypothetical protein DFA_10969 [Dictyostelium fasciculatum]
          Length = 369

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 172/340 (50%), Gaps = 81/340 (23%)

Query: 52  VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSY-------- 103
           +    ++   F  +  ++ K YES E +  RF  F KN+D I++ N K + +        
Sbjct: 33  LFSHEQYTTEFKGWVGQFEKNYESHEFLN-RFDIFKKNMDYIKTWNDKSVDHKLELNTLA 91

Query: 104 --------------------RLGLN------------------------------ISPVK 113
                               R+GLN                              +S VK
Sbjct: 92  DLTDKEYQRLYLGTKVNGALRVGLNHADERDFGHIKSVFSNVKDNPNVDWRKQGAVSHVK 151

Query: 114 DQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 173
           +QG CGSCW+FS+TG++E A+    G+ ISLSEQQLVDC++ + N GCNGGL + AF+Y+
Sbjct: 152 NQGQCGSCWSFSSTGAIEGAHAIKTGEMISLSEQQLVDCSKRYGNNGCNGGLMTLAFDYV 211

Query: 174 KYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVA 232
              GGL++EEAYPYT  D   C F+S N    + D  NI  G E  L+  +  V PVSVA
Sbjct: 212 IDAGGLESEEAYPYTTTDTSACMFNSTNAVTSISDHQNIRAGNEKHLETVLRNVGPVSVA 271

Query: 233 FEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG--------------VEDGVP-- 275
            +     FRFYKSG++ + +C ++ +D  H V+AVG+G              + D     
Sbjct: 272 IDASPRSFRFYKSGIFYAPECSSSQLD--HGVLAVGFGKGNPESNFENKVSFIHDDTKNN 329

Query: 276 -YWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
            Y+++KNSWG +WG +G+  M    KN CGIAT A+YP +
Sbjct: 330 EYYIVKNSWGSDWGSNGFIYMSKNRKNNCGIATMATYPTI 369


>gi|380790141|gb|AFE66946.1| cathepsin L1 preproprotein [Macaca mulatta]
 gi|384939708|gb|AFI33459.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|109112057|ref|XP_001086247.1| PREDICTED: cathepsin L1-like isoform 5 [Macaca mulatta]
 gi|402897797|ref|XP_003911929.1| PREDICTED: cathepsin L1 [Papio anubis]
          Length = 333

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 SKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|291224872|ref|XP_002732426.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 691

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 129/216 (59%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FSTTGS+E    +  GK +S SEQQLVDC+ ++ N G
Sbjct: 479 VDWRTKGYVTEVKDQGACGSCWAFSTTGSMEGQSFKNTGKLVSFSEQQLVDCSGSYGNMG 538

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL  QAF YI+ + G++ E  YPYT KD  C + +           +I    E  LQ
Sbjct: 539 CGGGLMDQAFAYIE-DYGIEPEADYPYTAKDDPCSYDTSKAVATNTGYTDIATMDEKALQ 597

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPYWL 278
            AV  V P+SVA +     FR YKSGVY    C  T +D  H V+AVGYG  +DG  YW+
Sbjct: 598 QAVATVGPISVAIDASHSSFRLYKSGVYDEPACSQTMLD--HGVLAVGYGTTDDGNDYWI 655

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG  WG+ GY  M     N CGIAT ASYP++
Sbjct: 656 VKNSWGSTWGNQGYIHMSRNNDNQCGIATNASYPLM 691


>gi|6978723|ref|NP_037288.1| cathepsin L1 preproprotein [Rattus norvegicus]
 gi|55888|emb|CAA68691.1| prepro-cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+    N
Sbjct: 116 KTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L   V  V P+SVA +      +FY SG+Y    C  +  D++H V+ VGYG E    + 
Sbjct: 235 LMKPVATVGPISVAMDASHPSLQFYSSGIYYEPNC--SSKDLDHGVLVVGYGYEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct: 293 DKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 152/303 (50%), Gaps = 56/303 (18%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC----KGLSYRLGLN--------- 108
           F  F   +GK Y +  E   RF  F+ N+  I + N       +SY+ G+N         
Sbjct: 26  FQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGKVSYKKGINKFTDMSQEE 85

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++ VKDQG CGSCW FS TGS 
Sbjct: 86  FKTMLTLSASRKPTLETTSYVKTGVEIPSSVDWRKEGRVTGVKDQGDCGSCWAFSITGST 145

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E AY +  GK +SLSEQQL+DC     + GC+GG     F+Y+  +G L +EE+Y Y G+
Sbjct: 146 EGAYARKSGKLVSLSEQQLIDCCTD-TSAGCDGGSLDDNFKYVMKDG-LQSEESYTYKGE 203

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSST 250
           DG CK++  +V  +V    +I    ED L  AV  V PVSV  +       Y SG+Y   
Sbjct: 204 DGACKYNVASVVTKVSKYTSIPAEDEDALLEAVATVGPVSVGMDA-SYLSSYDSGIYEDQ 262

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            C  +P  +NHA++AVGYG E+G  YW+IKNSWG +WG+ GYF++  GKN CGI+    Y
Sbjct: 263 DC--SPAGLNHAILAVGYGTENGKDYWIIKNSWGASWGEQGYFRLARGKNQCGISEDTVY 320

Query: 311 PVV 313
           P +
Sbjct: 321 PTI 323


>gi|167526493|ref|XP_001747580.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774026|gb|EDQ87660.1| predicted protein [Monosiga brevicollis MX1]
          Length = 330

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/232 (45%), Positives = 143/232 (61%), Gaps = 14/232 (6%)

Query: 85  TFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
           T  +N   I     + + +R    ++ +K+QG CGSCW+FSTTGS+E A+  A GK +SL
Sbjct: 95  TRPRNEVWITEAPLQEVDWRQKNAVTEIKNQGQCGSCWSFSTTGSVEGAHAIATGKLVSL 154

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV-GV 203
           SEQQL+DC+  + N GCNGGL   AFEY+  NGGLDTEE YPYT +DG C    E     
Sbjct: 155 SEQQLMDCSTRYGNHGCNGGLMDYAFEYVIANGGLDTEEDYPYTAEDGKCNTEKEKKHAA 214

Query: 204 QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHA 262
           ++    N+    ED+L  AV  + PVSVA E    GF+ Y SGV+   KCG +   ++H 
Sbjct: 215 EIHGFRNVPKEHEDQLAAAVS-IGPVSVAIEADQAGFQHYTSGVFDG-KCGTS---LDHG 269

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG---KNMCGIATCASYP 311
           V+ VGY  +    YW++KNSWG++WG+ GY +++ G   K MCGI   ASYP
Sbjct: 270 VLVVGYSDD----YWIVKNSWGKSWGEEGYIRLKRGVDKKGMCGITMQASYP 317


>gi|356559055|ref|XP_003547817.1| PREDICTED: cysteine proteinase RD21a [Glycine max]
          Length = 366

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 141/218 (64%), Gaps = 12/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R+   ++P+KDQG CGSCW FST  ++EA      GK +SLSEQ+LVDC +A+ N+G
Sbjct: 134 VDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAY-NEG 192

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AFE+I  NGG+DT++ YPY G DG+C  + +N  V  +D   ++    E+ L
Sbjct: 193 CNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKVVNIDGFEDVPPYDENAL 252

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVS+A E      + Y+SGV++  KCG +   ++H VV VGYG E+GV YWL
Sbjct: 253 KKAVAH-QPVSIAIEASGRDLQLYQSGVFTG-KCGTS---LDHGVVVVGYGSENGVDYWL 307

Query: 279 IKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           ++NSWG  WG+ GYFKM+         CGI   ASYPV
Sbjct: 308 VRNSWGTGWGEDGYFKMQRNVRTPTGKCGITMEASYPV 345


>gi|18141285|gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 156/306 (50%), Gaps = 61/306 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           +  +  ++GK   S+ E   RF  F  NL  I   N K LSYRLGL              
Sbjct: 48  YEEWLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSM 107

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++ VKDQG CGSCW FST G++E 
Sbjct: 108 YLGSRLKRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEG 167

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
                 G  I+LSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DTEE YPY G DG
Sbjct: 168 INKIVTGDLITLSEQELVDCDTSYN-EGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDG 226

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  + +N  V  +D   ++   +E+ L+ A+   +P+SVA E     F+ Y SG++   
Sbjct: 227 RCDQTRKNAKVVTIDLYEDVPANSEESLKKALSH-QPISVAIEGGGRAFQLYDSGIFDGI 285

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIAT 306
            CG    D++H VVAVGYG E+G  YW++KNSWG +WG+ GY +ME         CGIA 
Sbjct: 286 -CGT---DLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIASSAGKCGIAV 341

Query: 307 CASYPV 312
             SYP+
Sbjct: 342 EPSYPI 347


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYKEIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 238 RAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGRKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYVLMARNKNNACGIANLASFP 328


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 124 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 181

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 182 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALK 241

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 242 RAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 299

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 300 KNSWGENWGNKGYILMARNKNNACGIANLASFP 332


>gi|449676370|ref|XP_002156627.2| PREDICTED: counting factor associated protein D-like [Hydra
           magnipapillata]
          Length = 551

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 137/212 (64%), Gaps = 2/212 (0%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           +++RL   ++PVKDQ  CGSCW+F TTG++E A     G+ + LSEQ L+DC+  F N G
Sbjct: 336 INWRLFGAVTPVKDQAVCGSCWSFGTTGAIEGALFLKTGRLVRLSEQNLMDCSWGFGNNG 395

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           C+GG   +A+EYI  +GG+ T+++Y  Y G DG C   S  +G ++   VN+T G  D L
Sbjct: 396 CDGGEEFRAYEYIMKHGGIATDDSYGNYLGIDGYCHQKSSVIGAKIASYVNVTSGDMDAL 455

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + A+    P++V  +     F FY  GVY + +CGN P +++HAV+AVGYGV++G PY L
Sbjct: 456 KMAIVQHGPIAVGIDAAHLAFVFYSHGVYYNPECGNKPENLDHAVLAVGYGVQNGEPYTL 515

Query: 279 IKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           +KNSW  +WG+ GY  M    N CG+AT A++
Sbjct: 516 VKNSWSTHWGNDGYVLMSQRDNNCGVATDATF 547


>gi|535473|emb|CAA53377.1| cysteine protease [Vicia sativa]
          Length = 368

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/219 (47%), Positives = 141/219 (64%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +RL   I+ +KDQG CGSCW FST  ++EA      GK +SLSEQ+LVDC +AFN +G
Sbjct: 132 VDWRLKGAITHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFN-EG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AFE+I  NGG+DT++ YPY G +G C  + +   +  +D   ++    E+ L
Sbjct: 191 CNGGLMDYAFEFIIGNGGIDTDQHYPYKGFEGRCDPTRKKAKIVSIDGYEDVPSNNENAL 250

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVSVA E      + Y+SGV++  KCG +   ++HAVV VGYG E+G+ YWL
Sbjct: 251 KKAVAH-QPVSVAIEASGRALQLYQSGVFTG-KCGTS---LDHAVVIVGYGSENGLDYWL 305

Query: 279 IKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           ++NSWG NWG+ GYFKME          CGIA  ASYPV
Sbjct: 306 VRNSWGTNWGEDGYFKMERNVKGTHTGKCGIAVEASYPV 344


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPQGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANMASFP 327


>gi|27465595|ref|NP_775155.1| testin-2 precursor [Rattus norvegicus]
 gi|1174639|sp|P15242.2|TEST2_RAT RecName: Full=Testin-2; AltName: Full=CMB-23; Contains: RecName:
           Full=Testin-1; AltName: Full=CMB-22; Flags: Precursor
 gi|577430|gb|AAC52162.1| testin [Rattus norvegicus]
 gi|149039744|gb|EDL93860.1| testin gene [Rattus norvegicus]
          Length = 333

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 136/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QGHC S W FS TGSLE    +   + I LSEQ L+DC  +   
Sbjct: 116 KRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVT 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GG    AF+Y+K NGGL TEE+YPY G+   C++ +EN    V D V I  G+E+ 
Sbjct: 176 HGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDFVQIP-GSEEA 234

Query: 219 LQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   G F+FY SG+Y   +C    + +NHAV+ VGYG E    DG
Sbjct: 235 LMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDG 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             +WL+KNSWGE WG  GY K+     N CGIAT ++YP+V
Sbjct: 293 NSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 238 RAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNACGIANLASFP 328


>gi|148927394|gb|ABR19828.1| cysteine proteinase [Elaeis guineensis]
          Length = 469

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/274 (42%), Positives = 155/274 (56%), Gaps = 21/274 (7%)

Query: 54  GQARHALSFARFARRYGKIYESVE-------EMKLRFATFSKNLDLIRSTN--CKGLSYR 104
           G+    L   RFA    + Y S           + R +T   N    RS++     + +R
Sbjct: 88  GKYSFRLGLTRFADLTNEEYRSTYLGVRTAGSRRRRNSTVGSNRYRFRSSDDLPDSIDWR 147

Query: 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGG 164
               +  VKDQG CGSCW FST  ++E   H   G  ISLSEQ+LVDC   + NQGCNGG
Sbjct: 148 DKGAVVDVKDQGSCGSCWAFSTIAAVEGINHIVTGDLISLSEQELVDC-DTYYNQGCNGG 206

Query: 165 LPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAV 223
           L   AFE+I  NGG+DT+E YPYTG+DG C    +N  V  +DS  ++ +  E  LQ AV
Sbjct: 207 LMDYAFEFIISNGGIDTDEDYPYTGRDGSCDQYRKNAHVVTIDSYEDVPINDEKSLQKAV 266

Query: 224 GLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
              +PVSVA E     F+ Y+SG+++   CG    +++H V A+GYG E+G  YW++KNS
Sbjct: 267 A-NQPVSVAIEAGGRAFQLYESGIFTGY-CG---TELDHGVTAIGYGSENGKYYWIVKNS 321

Query: 283 WGENWGDHGYFKMEMGKN----MCGIATCASYPV 312
           WG +WG+ GY +ME   N     CGIA  ASYP+
Sbjct: 322 WGSDWGESGYIRMERNINSATGKCGIAMEASYPI 355


>gi|350425511|ref|XP_003494144.1| PREDICTED: counting factor associated protein D-like [Bombus
           impatiens]
          Length = 549

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 171/360 (47%), Gaps = 65/360 (18%)

Query: 3   RPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSF 62
           +P   V  V   + C              NP+R    + + +++T V +         +F
Sbjct: 200 KPSSEVFEVTTNMTCVGFPGPGDKHVYTFNPMR----EFVHNYDTHVNE---------AF 246

Query: 63  ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------- 108
             F + + K Y +  +  +R   F +NL  I STN     Y+L +N              
Sbjct: 247 EDFKKTHNKEYVNHVDQLMRKEVFRQNLRFIHSTNRANKGYQLSVNHLVDRTELELKALR 306

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F TTG++E 
Sbjct: 307 GKQYTAHYNGGQPFPHNAEKEVTEVPDSLDWRLYGAVTPVKDQSVCGSCWSFGTTGAVEG 366

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           AY+  +GK + LS+Q L+DC+  + N GC+GG   +++++I  +GGL TE+ Y  Y G+D
Sbjct: 367 AYYMKYGKLVRLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGGLPTEDDYGGYLGQD 426

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
           G C  ++  V  ++   VN+T G  + L+ A+    P+SVA +     F FY  GVY   
Sbjct: 427 GYCHINNATVTAKITGYVNVTSGDANALKVAIAKHGPISVAIDASHKTFSFYSHGVYYDE 486

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            CGNT   ++HAV+AVGYG  +G  YWL+KNSW   WG+ GY  M   KN CG+ T  +Y
Sbjct: 487 SCGNTEESLDHAVLAVGYGSLNGKDYWLVKNSWSNYWGNDGYILMSQEKNNCGVLTAPTY 546


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 238 RAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGKKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNACGIANLASFP 328


>gi|108735858|gb|ABG00260.1| cathepsin L1 [Fasciola hepatica]
          Length = 219

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/207 (46%), Positives = 134/207 (64%), Gaps = 4/207 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG+CGSCW FSTTG+++  Y +     IS SEQQLVDC++ + N GC GGL   
Sbjct: 13  VTEVKDQGNCGSCWAFSTTGTMKGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMEN 72

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A+EY+K   GL+TE +YPY+  +G C++  +    +V     +  G E ELQ+ VG   P
Sbjct: 73  AYEYLK-QFGLETESSYPYSAVEGPCRYDRKLGVAKVTGYYTVHSGDEVELQNLVGGEGP 131

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
            +VA +    F  Y+SG+Y S  C  +P  ++H V+AVGYG +DG  YW++KNSWG  WG
Sbjct: 132 PAVALDAELDFMMYRSGIYXSQTC--SPDRLSHGVLAVGYGTQDGTDYWIVKNSWGTWWG 189

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVVA 314
           + GY +M   + NMCGIA+ AS P+VA
Sbjct: 190 EDGYIRMVRNRGNMCGIASLASVPMVA 216


>gi|356582227|ref|NP_001239115.1| cathepsin L1 precursor [Canis lupus familiaris]
 gi|62899810|sp|Q9GL24.1|CATL1_CANFA RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|10185020|emb|CAC08809.1| cathepsin L [Canis lupus familiaris]
          Length = 333

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 135/221 (61%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N
Sbjct: 116 KSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAED 217
           +GCNGGL   AF Y+K NGGLD+EE+YPY G+D   C +  E         V++    E 
Sbjct: 176 EGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQ-REK 234

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DG 273
            L  AV  + P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E     
Sbjct: 235 ALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDC--SSKDLDHGVLVVGYGFEGTDSN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 293 NKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333


>gi|81294188|gb|AAI08032.1| Cathepsin L, 1 b [Danio rerio]
          Length = 336

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL   
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGLMDL 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       ++   V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITGFVDIPSGNELALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CG+AT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|344271925|ref|XP_003407787.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 333

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 131/212 (61%), Gaps = 11/212 (5%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N+GCNGGL   
Sbjct: 126 VTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWREGNEGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K NGGLD+EE+YPYT  D   C+++ +         V+I    E  L  AV  V 
Sbjct: 186 AFQYVKDNGGLDSEESYPYTATDTQDCRYNPKYSAANDTGFVDIPP-QEKALMKAVATVG 244

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP----YWLIKNS 282
           P+SVA +     F+FY SG+Y    C    + VNH V+AVGYG E   P    YWL+KNS
Sbjct: 245 PISVAIDAGQVSFQFYSSGIYFDPAC---RLTVNHGVLAVGYGFEGTDPDKNKYWLVKNS 301

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG++WG  GY K+   + N CGIA  ASYP V
Sbjct: 302 WGKSWGADGYIKIAKDRNNHCGIARAASYPTV 333


>gi|148575301|gb|ABQ95351.1| secreted cathepsin L2 [Fasciola hepatica]
          Length = 326

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/257 (40%), Positives = 144/257 (56%), Gaps = 10/257 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKN-LDLIRSTNCKGLSYRLGLNISPVKDQGHC 118
           L+F  F  +Y        E+  R   +  N L +  S + +   Y     ++ VKDQG C
Sbjct: 75  LTFEEFKAKYLIEIPRSSELLSRGIPYKANKLAVPESIDWRDYYY-----VTEVKDQGQC 129

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FSTTG++E  + +      S SEQQLVDC + F N GC GG    A+EY+K+N G
Sbjct: 130 GSCWAFSTTGAVEGQFRKNERASASFSEQQLVDCTRDFGNYGCGGGYMENAYEYLKHN-G 188

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG 238
           L+TE  YPY   +G C++       +V     +  G E EL++ VG   P +VA +    
Sbjct: 189 LETESYYPYQAVEGPCQYDGRLAYAKVTGYYTVHSGDEIELKNLVGTEGPAAVALDADSD 248

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y+SG+Y S  C   P  + HAV+AVGYG +DG  YW++KNSWG  WG+ GY +    
Sbjct: 249 FMMYQSGIYQSQTC--LPDRLTHAVLAVGYGSQDGTDYWIVKNSWGTWWGEDGYIRFARN 306

Query: 299 K-NMCGIATCASYPVVA 314
           + NMCGIA+ AS P+VA
Sbjct: 307 RGNMCGIASLASVPMVA 323


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCKGYREIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYGV+ G  +W+I
Sbjct: 238 RAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGVQKGNKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNACGIANLASFP 328


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 238 RAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNACGIANLASFP 328


>gi|74927078|sp|Q86GF7.1|CRUST_PANBO RecName: Full=Crustapain; AltName: Full=NsCys; Flags: Precursor
 gi|28971811|dbj|BAC65417.1| crustapain [Pandalus borealis]
          Length = 323

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 126/208 (60%), Gaps = 5/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FS   +LE A+    G  +SLSEQ LVDC+ ++ NQGCNGG P Q
Sbjct: 118 VTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQ 177

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A++YI  N G+DTE +YPY   D  C++ + N+G  V   V    G E  LQHAV    P
Sbjct: 178 AYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGP 237

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           VSV  +     F  Y  GVY    C +     NHAV AVGYG + +G  YW++KNSWG  
Sbjct: 238 VSVCIDAGQSSFGSYGGGVYYEPNCDS--WYANHAVTAVGYGTDANGGDYWIVKNSWGAW 295

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG+ GY KM   + N C IAT + YPVV
Sbjct: 296 WGESGYIKMARNRDNNCAIATYSVYPVV 323


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 238 RAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNACGIANLASFP 328


>gi|395740610|ref|XP_002819972.2| PREDICTED: cathepsin L1 [Pongo abelii]
          Length = 333

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis]
 gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis]
          Length = 341

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 151/303 (49%), Gaps = 62/303 (20%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRLGLN------------------ 108
           +YG++Y+   E + RF  F  N++ I S N  G   Y+L +N                  
Sbjct: 44  KYGRVYKDNSEKERRFEIFRNNVEFIESFNKPGNRPYKLDINEFADLTNEEFKASRNGYK 103

Query: 109 --------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQ 136
                                           ++P+KDQG CG CW FS   ++E     
Sbjct: 104 RSSNVGLSEKSSFRYGNVTAVPTSMDWRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKL 163

Query: 137 AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
           + GK ISLSEQ+LVDC  +  +QGC GGL   AFE+IK NGGL TE  YPY G DG C  
Sbjct: 164 STGKLISLSEQELVDCDTSGEDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNT 223

Query: 197 SSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGN 254
           +   N   ++    ++   +ED L  AV   +PVSVA +     F+FY  GV++    G+
Sbjct: 224 NKAGNDAAKITGYEDVPANSEDALLKAVA-SQPVSVAIDASGSAFQFYSGGVFT----GD 278

Query: 255 TPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASY 310
              +++H V AVGYG  DG  YWL+KNSWG +WG+ GY +ME      + +CGIA  +SY
Sbjct: 279 CGTELDHGVTAVGYGTSDGTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQSSY 338

Query: 311 PVV 313
           P  
Sbjct: 339 PTA 341


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 156/306 (50%), Gaps = 67/306 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRLGLN------------------ 108
           +YGK Y ++ E + RF  F  NL  +   N  G  SY+LGLN                  
Sbjct: 55  KYGKAYNALGEKERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSNEEYRAAYLGTR 114

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVKDQG CGSCW FST G++E  
Sbjct: 115 MDGKRRLLGGPKSARYLFKDGDDLPESVDWREKGAVAPVKDQGQCGSCWAFSTVGAVEGI 174

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
                G   SLSEQ+LVDC + +N QGCNGGL   AFE+I  NGG+DTEE YPY   D +
Sbjct: 175 NQIVTGNLTSLSEQELVDCDKVYN-QGCNGGLMDYAFEFIMKNGGIDTEEDYPYKAVDSM 233

Query: 194 CKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTK 251
           C  + +N  V  +D   ++    E  L+ AV   +PVSVA E     F+ Y+SGV++ + 
Sbjct: 234 CDPNRKNARVVTIDGYEDVPQNDEKSLRKAVA-NQPVSVAIEAGGRAFQLYQSGVFTGS- 291

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIAT 306
           CG     ++H VVAVGYG E+GV YW+++NSWG  WG++GY +ME          CGIA 
Sbjct: 292 CGTQ---LDHGVVAVGYGTENGVDYWVVRNSWGPAWGENGYIRMERNVASTETGKCGIAM 348

Query: 307 CASYPV 312
            ASYP 
Sbjct: 349 EASYPT 354


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 99/235 (42%), Positives = 141/235 (60%), Gaps = 11/235 (4%)

Query: 84  ATFSKNLDLIRSTNCKG-----LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
            +FS++ D +   + +G     + YR    ++PVK+QG CGSCW FS+ G+LE    +  
Sbjct: 151 TSFSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKT 210

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G++  C ++ 
Sbjct: 211 GKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP 268

Query: 199 ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPM 257
                +      I  G E  L+ AV  V P+SVA +  +  F+FY  GVY    C +   
Sbjct: 269 TGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSD-- 326

Query: 258 DVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 327 NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 381


>gi|375340657|emb|CBJ56264.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 141/249 (56%), Gaps = 15/249 (6%)

Query: 77  EEMKLRFATFSKNLDLIRSTNC----------KGLSYRLGLNISPVKDQGHCGSCWTFST 126
           EE+   FAT S   D+ R+ +             + +R    ++ VK QG CGSCW FS 
Sbjct: 92  EEIMQSFATLSPPTDIQRAASPFAGTTGADVPDTMDWREKGCVTSVKMQGSCGSCWAFSA 151

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
            G+LE    +  GK + LS Q LVDC+  + N GCNGG   QAF+Y+  N G+D++ +YP
Sbjct: 152 AGALEGQLAKTTGKLVDLSPQNLVDCSTKYGNHGCNGGFMHQAFQYVIDNQGIDSDASYP 211

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
           YTG++G C+++S+           +  G E  L+ A+  + P+SVA +     F FY+SG
Sbjct: 212 YTGRNGECRYNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSG 271

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN-MCGI 304
           VY+   C      VNH V+AVGYG  DG  YWL+KNSWG+ +GD GY +M   KN  CGI
Sbjct: 272 VYNDPNCSQ---KVNHGVLAVGYGTLDGQDYWLVKNSWGKTFGDQGYIRMSRNKNDQCGI 328

Query: 305 ATCASYPVV 313
           A    YP++
Sbjct: 329 ALYGCYPIM 337


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 120 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALK 237

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 238 RAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNACGIANLASFP 328


>gi|395856027|ref|XP_003800444.1| PREDICTED: cathepsin K [Otolemur garnettii]
          Length = 329

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC    +N G
Sbjct: 119 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--DNDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SV  +  +  F+FY  GVY    C +   +VNHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPISVGIDASLTSFQFYSKGVYYDESCNSD--NVNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|332375406|gb|AEE62844.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 134/213 (62%), Gaps = 5/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW FS TGS+E A  ++ GK +SLSEQQLVDC     N G
Sbjct: 113 VDWRTEGYVTGVKNQGDCGSCWAFSLTGSVEGALFKSTGKLVSLSEQQLVDCTYGTVNFG 172

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG   + F YI+   GL+ E +YPY  +DG CKF +  V  ++ D V    G E+ L 
Sbjct: 173 CDGGYLEETFPYIQ-ETGLEAEASYPYKARDGTCKFDASKVVTKINDYV-YWYGDEEALL 230

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
            A   + P+SVA +  +    Y SGV+SS  C +   D+NH V+ VGYG E+GV YWL+K
Sbjct: 231 EATATIGPISVAMDA-NYIDSYASGVFSSRLCSSD--DLNHGVLVVGYGSENGVNYWLVK 287

Query: 281 NSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NSW E+WG+ GY K+  G+N CGIA   SYP+V
Sbjct: 288 NSWAEDWGESGYLKLLRGQNECGIAEDDSYPIV 320


>gi|354502593|ref|XP_003513368.1| PREDICTED: cathepsin L1-like isoform 2 [Cricetulus griseus]
          Length = 330

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 133/218 (61%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG C SCW FS  GSLE    +  GK + LSEQ LVDC+++ +N
Sbjct: 116 KSVDWRKHGYVTPVKDQGSCVSCWAFSAVGSLEGQMFRKTGKLVPLSEQNLVDCSRSQHN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL + AF+YIK NGGLDT E+YPY  +DG C++  ++    +   V +    E+ 
Sbjct: 176 NGCHGGLFTSAFQYIKDNGGLDTSESYPYEAQDGPCRYDPKHSAANITGFV-VVPSNEEA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L  AV  V P+S+   V +    FYKSG Y    C N     NH+V+ VGYG E DG  Y
Sbjct: 235 LMKAVATVGPISIGISVRLRSLLFYKSGFYYDPDCYN--HYPNHSVLLVGYGEESDGQKY 292

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWGE WG  GY K+   + N C IAT A+YP V
Sbjct: 293 WLVKNSWGEEWGMDGYIKIAKDRNNHCSIATIAAYPTV 330


>gi|157862757|gb|ABV90501.1| cathepsin L, partial [Fasciola gigantica]
          Length = 244

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQ  CGSCW FSTTG++E  + +  G  +S SEQQLVDC+  F N G
Sbjct: 30  IDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVDCSSDFGNNG 89

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY++   GL+ E  YPY   +G C++       +V     +  G E ELQ
Sbjct: 90  CRGGLMEIAYEYLR-RFGLEIESTYPYRAVEGPCRYDRRLGVAKVTGYYIVHSGDEVELQ 148

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG+  P +VA +V   F  Y+SG+Y S  C  +P  +NH V+AVGYG + G  YW++K
Sbjct: 149 NLVGIEGPAAVALDVESDFVMYRSGIYQSQTC--SPDRLNHGVLAVGYGTQSGTDYWIVK 206

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 207 NSWGTWWGEGGYIRMVRNRGNMCGIASMASLPMVA 241


>gi|332260024|ref|XP_003279085.1| PREDICTED: cathepsin L1 isoform 3 [Nomascus leucogenys]
 gi|441593306|ref|XP_004087072.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
 gi|441593309|ref|XP_004087073.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
          Length = 333

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +     F+FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAVDAGHQSFQFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|213512938|ref|NP_001133871.1| Cathepsin K precursor [Salmo salar]
 gi|209155648|gb|ACI34056.1| Cathepsin K precursor [Salmo salar]
 gi|223647252|gb|ACN10384.1| Cathepsin K precursor [Salmo salar]
 gi|223673129|gb|ACN12746.1| Cathepsin K precursor [Salmo salar]
          Length = 331

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/218 (45%), Positives = 132/218 (60%), Gaps = 7/218 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + YR    ++PVK+Q  CGSCW FS+ G+LE    +  GK I LS Q LVDC     N
Sbjct: 118 RSIDYRKKGMVTPVKNQLSCGSCWAFSSAGALEGQLAKTTGKLIDLSPQNLVDCVT--EN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GG  + AFEY++ NGG+DTEEAYPY G+DG C +++  +G Q      I  G E  
Sbjct: 176 NGCGGGYMTNAFEYVEENGGIDTEEAYPYLGQDGQCAYNASGMGAQCRGFKEIPEGDEWA 235

Query: 219 LQHAVGLVRPVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG-VEDGVPY 276
           L  AV  V PV+V  +  +  F+FY+ GVY    C     D+NHAV+AVGYG    G+ +
Sbjct: 236 LTKAVVKVGPVAVGIDATLSTFQFYQRGVYYDPNCNKD--DINHAVLAVGYGQTAKGMKF 293

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSW E+WG  GY  M   + N CGIA  ASYP++
Sbjct: 294 WIVKNSWSESWGKQGYIMMARNRGNACGIANLASYPIM 331


>gi|388519351|gb|AFK47737.1| unknown [Medicago truncatula]
          Length = 359

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 138/211 (65%), Gaps = 13/211 (6%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ +KDQG CGSCW FST  ++EA      GK +SLSEQ+LVDC +AFN +GCNGGL   
Sbjct: 137 VAHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFN-EGCNGGLMDY 195

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVR 227
           AFE+I  NGG+DTE+ YPY G +G C  + +N  V  +D   ++    E+ L+ AV   +
Sbjct: 196 AFEFIVENGGIDTEQDYPYKGFEGRCDPTRKNAKVVSIDGYEDVPAYNENALKKAV-FHQ 254

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           PVSVA E      + Y+SGV++  +CG    +++H VV VGYG E+GV YWL++NSWG N
Sbjct: 255 PVSVAIEAGGRALQLYQSGVFTG-RCG---TNLDHGVVVVGYGFENGVDYWLVRNSWGTN 310

Query: 287 WGDHGYFKME-----MGKNMCGIATCASYPV 312
           WG+ GYFK+E     +    CGIA  ASYPV
Sbjct: 311 WGEDGYFKLERNVKKINTGKCGIAMQASYPV 341


>gi|124484387|dbj|BAF46304.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 474

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 185/374 (49%), Gaps = 82/374 (21%)

Query: 1   MARPVQLVSSVILLLCCAAAASASAS--SFDDSNPIRLVSSDGLRDFETSVLQVIGQARH 58
           MARP  L + +  ++  AAAA+   S  ++D  +P +     GL   E  V ++      
Sbjct: 1   MARPSILFTFLFAVVSAAAAAAEDMSIITYDQQHPAK-----GLVRSEDEVKEM------ 49

Query: 59  ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLN--------- 108
              F  +  ++GK Y +V+E   RF  F  NL  I   N  +  SY+LGLN         
Sbjct: 50  ---FESWLVKHGKSYNAVDEKDKRFKIFRDNLKYIDEKNSLENRSYKLGLNRFADITNEE 106

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      ++ VKDQG CGSCW FS
Sbjct: 107 YRTGYLGAKRDASRNMVKSKSDRYAPVAGDSLPDSIDWREKGAVTGVKDQGSCGSCWAFS 166

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
           T  ++E     A G  ISLSEQ+LVDC +  N QGCNGG    AF++I  NGG+D+EE Y
Sbjct: 167 TIAAVEGVNQLATGNLISLSEQELVDCDRKIN-QGCNGGDMGYAFQFIIKNGGIDSEEDY 225

Query: 186 PYTGKDGVCK-FSSENVGVQVLDSVN-ITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFY 242
           PYTGKDG C  +   N  V  +D    + +  E  LQ AV   +PVSVA E     F+ Y
Sbjct: 226 PYTGKDGKCDSYRQNNAKVASIDGYEEVPVNNEKSLQKAVA-NQPVSVAIEAGGYDFQLY 284

Query: 243 KSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG---- 298
            SG+++ + CG    D++H V AVGYG E+GV YW++KNSWG+ WG+ GY +M+      
Sbjct: 285 SSGIFTGS-CG---TDLDHGVAAVGYGTENGVDYWIVKNSWGDYWGEKGYVRMQRNVKAK 340

Query: 299 KNMCGIATCASYPV 312
             +CGIA  ASYP 
Sbjct: 341 TGLCGIAMEASYPT 354


>gi|444522624|gb|ELV13407.1| Cathepsin L1 [Tupaia chinensis]
          Length = 307

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/231 (44%), Positives = 140/231 (60%), Gaps = 14/231 (6%)

Query: 89  NLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
           +LD+  S + +   Y     ++PVK+QG CGSCW FS+TG+LE    +  GK +SLSEQ 
Sbjct: 85  HLDVPESVDWREKGY-----VTPVKNQGDCGSCWAFSSTGALEGQMFRKTGKLVSLSEQN 139

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           LVDC+ +  N GCNGG+   AF Y+K NGGLD+EE+YPY   D  CK++ +N        
Sbjct: 140 LVDCSISEGNFGCNGGIMDNAFLYVKDNGGLDSEESYPYEAVDDSCKYNPKNSAANDTGF 199

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           V++ +  E  L+ AV  V P+SV  +   D F+FYK G+Y    C +  +D  HAV+ VG
Sbjct: 200 VHLPV-EEKALEKAVATVGPISVGIDASADSFQFYKEGIYFEPNCSSVELD--HAVLVVG 256

Query: 268 YGVEDGV----PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           YGV +       +WL+KNSWG+NWG  GY  M   + N CGIA+ A YP V
Sbjct: 257 YGVMEEASTNNKFWLVKNSWGKNWGMDGYIMMAKDRNNNCGIASYAMYPTV 307


>gi|109940313|sp|P25975.3|CATL1_BOVIN RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|74354943|gb|AAI02313.1| CTSL2 protein [Bos taurus]
 gi|154425700|gb|AAI51426.1| Cathepsin L2 [Bos taurus]
 gi|296484466|tpg|DAA26581.1| TPA: cathepsin L2 precursor [Bos taurus]
 gi|440898893|gb|ELR50299.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 334

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 131/212 (61%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   
Sbjct: 126 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK NGGLD+EE+YPY   D   C +  E         V+I    E  L  AV  V 
Sbjct: 186 AFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVG 244

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNS 282
           P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E    +   +W++KNS
Sbjct: 245 PISVAIDAGHTSFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNS 302

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 303 WGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 128/206 (62%), Gaps = 2/206 (0%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCW+FSTTG++E AY    GK +SLSEQ LVDCA+  +  GC+GG   +
Sbjct: 122 VTEVKDQGSCGSCWSFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKE-DCYGCSGGYMDK 180

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A EYI+  GG+ +E  YPY G D  C+F S  V  ++ +   I    ED+L++AV    P
Sbjct: 181 ALEYIETAGGIMSENDYPYEGIDDKCRFDSSKVAAKISNFTYIKKNDEDDLKNAVIAKGP 240

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           +SVA +    F+ Y SG+   + C +    +NH V+ VGYG E    YW++KNSWG +WG
Sbjct: 241 ISVAIDASFNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTEKEQDYWIVKNSWGADWG 300

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
             GY  M   K N CGIAT A+YP +
Sbjct: 301 MDGYIWMSRNKNNQCGIATDATYPTI 326


>gi|380236892|emb|CBK52289.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 141/249 (56%), Gaps = 15/249 (6%)

Query: 77  EEMKLRFATFSKNLDLIRSTNC----------KGLSYRLGLNISPVKDQGHCGSCWTFST 126
           EE+   FAT S   D+ R+ +             + +R    ++ VK QG CGSCW FS 
Sbjct: 92  EEIMQSFATLSPPTDIQRAASPFAGTTGADVPDTMDWREKGCVTSVKMQGSCGSCWAFSA 151

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
            G+LE    +  GK + LS Q LVDC+  + N GCNGGL   AF+Y+  N G+D++ +YP
Sbjct: 152 AGALEGQLAKTTGKLVDLSPQNLVDCSTKYGNHGCNGGLMHHAFQYVIDNQGIDSDASYP 211

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
           YTG++G C+++S+           +  G E  L+ A+  + P+SVA +     F FY+SG
Sbjct: 212 YTGRNGECRYNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSG 271

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN-MCGI 304
           VY+   C      VNH V+AVGYG  DG  YWL+KNSWG+ +GD GY +M   KN  CGI
Sbjct: 272 VYNDPNCSQ---KVNHGVLAVGYGTLDGQDYWLVKNSWGKTFGDQGYIRMSRNKNDQCGI 328

Query: 305 ATCASYPVV 313
           A    YP++
Sbjct: 329 ALYGCYPIM 337


>gi|1222694|gb|AAA92018.1| CP5 [Dictyostelium discoideum]
          Length = 344

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 165/332 (49%), Gaps = 75/332 (22%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           Q   + ++  +F  +   + K Y S EE   R+  F+ N+D ++  N KG    LGLN  
Sbjct: 19  QQFSELQYRNAFTDWMITHQKSYTS-EEFGARYNIFTANMDYVQQWNSKGSETVLGLNNF 77

Query: 109 ----------------------------------------------ISPVKDQGHCGSCW 122
                                                         ++PVK+QG CG CW
Sbjct: 78  ADITNEEYRNTYLGTKFDASSLIGTQEEKVHTNSSAASKDWRSEGAVTPVKNQGQCGGCW 137

Query: 123 TFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182
           +FSTTGS E A+ Q+ G+ +SLSEQ L+DC+    N GC+GGL + AFEYI  N G+DTE
Sbjct: 138 SFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE--NSGCDGGLMTYAFEYIINNNGIDTE 195

Query: 183 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRF 241
            +YPY  ++G C++ SEN G  +     +T G+E  L+ AV  V PVSVA +     F+ 
Sbjct: 196 SSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVN-VNPVSVAIDASHQSFQL 254

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-------------------PYWLIKNS 282
           Y SG+Y   +C +  +D  H V+AVGYG   G                     YW++KNS
Sbjct: 255 YTSGIYYEPECSSENLD--HGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNS 312

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG +WG  GY  M   + N CGIA+ AS+PVV
Sbjct: 313 WGTSWGIEGYILMSRNRDNNCGIASSASFPVV 344


>gi|344257451|gb|EGW13555.1| Cathepsin L1 [Cricetulus griseus]
          Length = 474

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 134/219 (61%), Gaps = 8/219 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG C SCW FS  GSLE    +  GK + LSEQ LVDC+++ +N
Sbjct: 260 KSVDWRKHGYVTPVKDQGSCVSCWAFSAVGSLEGQMFRKTGKLVPLSEQNLVDCSRSQHN 319

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL + AF+YIK NGGLDT E+YPY  +DG C++  ++    +   V +    E+ 
Sbjct: 320 NGCHGGLFTSAFQYIKDNGGLDTSESYPYEAQDGPCRYDPKHSAANITGFV-VVPSNEEA 378

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNT-PMDVNHAVVAVGYGVE-DGVP 275
           L  AV  V P+S+   V +    FYKSG Y    C N  P   NH+V+ VGYG E DG  
Sbjct: 379 LMKAVATVGPISIGISVRLRSLLFYKSGFYYDPDCYNHYP---NHSVLLVGYGEESDGQK 435

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           YWL+KNSWGE WG  GY K+   + N C IAT A+YP V
Sbjct: 436 YWLVKNSWGEEWGMDGYIKIAKDRNNHCSIATIAAYPTV 474



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 7/122 (5%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CG+CW FS  GSL        GK + LSEQ LVDC+ +  N
Sbjct: 81  KSVDWRKHGYVTPVKDQGSCGACWAFSAVGSLVGQMFWKTGKLVPLSEQNLVDCSWSHGN 140

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-------GVCKFSSENVGVQVLDSVNI 211
            GC+GGL   AF+Y+  NGGLDT +     G D        +  F +E V  + L   N+
Sbjct: 141 IGCHGGLMQNAFQYVMDNGGLDTTQTLRELGLDLKEKVAHSIYNFQNEEVERRALWEENM 200

Query: 212 TL 213
            L
Sbjct: 201 KL 202


>gi|349604730|gb|AEQ00199.1| Cathepsin K-like protein, partial [Equus caballus]
          Length = 219

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 9   IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 66

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 67  CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPQGNEKALK 126

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 127 RAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWII 184

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 185 KNSWGENWGNKGYILMARNKNNACGIANMASFP 217


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 13/247 (5%)

Query: 74  ESVEEMK-LRFAT-FSKNLDLIRSTNCKG-----LSYRLGLNISPVKDQGHCGSCWTFST 126
           E V++M  L+  T FS++ D +   + +G     + YR    ++PVK+QG CGSCW FS+
Sbjct: 85  EVVQKMTGLKVPTSFSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSS 144

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
            G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYP
Sbjct: 145 VGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYP 202

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
           Y G++  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY  G
Sbjct: 203 YVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKG 262

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGI 304
           VY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGI
Sbjct: 263 VYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGI 320

Query: 305 ATCASYP 311
           A  AS+P
Sbjct: 321 ANLASFP 327


>gi|340368360|ref|XP_003382720.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 326

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 104/228 (45%), Positives = 133/228 (58%), Gaps = 8/228 (3%)

Query: 91  DLIRSTNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQ 147
           D  + T  K    + +R    ++ +K+QG CGSCW+FSTTGSLE  +    G  +SLSEQ
Sbjct: 98  DFYKKTGVKVAATVDWREKGAVTAIKNQGKCGSCWSFSTTGSLEGQHFLKTGTLLSLSEQ 157

Query: 148 QLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLD 207
           Q VDC+  F N GC GG    AF Y++   G +TE  YPYT +DG CKF S    V+   
Sbjct: 158 QFVDCSTKFGNHGCKGGTMDNAFRYLETVSGDETEMMYPYTAEDGFCKFRSTEGKVKCEG 217

Query: 208 SVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266
             +I    ED L+ AV  V P+SVA +     F+ YK GVY +  C +T +D  H V+AV
Sbjct: 218 YKDIPRDDEDALREAVATVGPISVAIDAGHSSFQLYKEGVYYNPTCSSTKLD--HGVLAV 275

Query: 267 GYGVEDGV-PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           GYG  +G   YWL+KNSWG +WG  GY  M   + N CGIAT ASYP 
Sbjct: 276 GYGTYEGSEEYWLVKNSWGPSWGMEGYIMMSRNRENNCGIATMASYPT 323


>gi|413919736|gb|AFW59668.1| cysteine protease 1 [Zea mays]
          Length = 469

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 157/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +G+ Y +V E + RF  F  NL  + + N        S+RLGLN         
Sbjct: 46  YAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLTNDE 105

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ VKDQG CGSCW FST 
Sbjct: 106 YRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEVKDQGSCGSCWAFSTI 165

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N QGCNGGL   AFE+I  NGG+DTEE YPY
Sbjct: 166 AAVEGINQIVTGDMISLSEQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGIDTEEDYPY 224

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
            G DG C  + +N  V  +DS  ++   +E  LQ AV   +P+SVA E     F+ Y SG
Sbjct: 225 KGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVA-NQPISVAIEAGGRAFQLYNSG 283

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++ T CG     ++H V AVGYG E+G  YW++KNSWG +WG+ GY +ME         
Sbjct: 284 IFTGT-CGTA---LDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGK 339

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 340 CGIAVEPSYPL 350


>gi|356563584|ref|XP_003550041.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 366

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 12/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R+   ++P+KDQG CGSCW FST  ++EA      GK +SLSEQ+LVDC +A+ NQG
Sbjct: 134 VDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAY-NQG 192

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AFE+I  NGG+DT++ YPY G DG+C  + +N     +D   ++    E+ L
Sbjct: 193 CNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKAVNIDGYEDVPPYDENAL 252

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVS+A E      + Y+SGV++  +CG +   ++H VV VGYG E+GV YWL
Sbjct: 253 KKAVAR-QPVSIAIEASGRALQLYQSGVFTG-ECGTS---LDHGVVVVGYGSENGVDYWL 307

Query: 279 IKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           ++NSWG  WG+ GYFKM+         CGI   ASYPV
Sbjct: 308 VRNSWGTGWGEDGYFKMQRNVRTPTGKCGITMEASYPV 345


>gi|66378018|gb|AAY45870.1| cathepsin L-like cysteine proteinase [Rotylenchulus reniformis]
          Length = 369

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 131/216 (60%), Gaps = 5/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW FS TG+LE  + +  G+ +SLSEQ LVDC + + N G
Sbjct: 156 VDWRDKQWVTEVKNQGQCGSCWAFSATGALEGQHARKTGQLVSLSEQNLVDCTKKYGNMG 215

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGGL   AF+YIK N G+D E  YPY  K G C F   +VG       ++  G ED+L+
Sbjct: 216 CNGGLMDNAFQYIKDNEGIDKEMTYPYKAKAGRCHFKRNDVGATDTGFFDVAEGDEDKLK 275

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWL 278
            AV    PVSVA +     F+ YK GVY   +C   P +++H V+ VGYG + +   YW+
Sbjct: 276 LAVATQGPVSVAIDAGHRSFQLYKHGVYFEEEC--NPEELDHGVLVVGYGTDPEHGDYWI 333

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSW  +WG+ GY +M   + N CGI + ASYP V
Sbjct: 334 VKNSWSTHWGEQGYIRMAPNRNNNCGIPSHASYPTV 369


>gi|225719058|gb|ACO15375.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 326

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/312 (37%), Positives = 158/312 (50%), Gaps = 56/312 (17%)

Query: 56  ARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKGL-SYRLGLN--- 108
           A  +  + ++   +GK+Y S +E  LRF  F +N  +I   N    +G  +Y LG+N   
Sbjct: 17  AEFSSEWLKWKATHGKVYNSADEESLRFKIFQENSLMITQHNEEYRQGFHTYILGMNHFG 76

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      ++PVKDQG CGSCW FS
Sbjct: 77  DLLHSEFLERSNGFQGGVSGGDVFTFDTNAPVPSYANWTAKGAVTPVKDQGKCGSCWAFS 136

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
            TGS+E        K +SLSEQQLVDC+    N GC GGL   AF+Y   N G+  E++Y
Sbjct: 137 ATGSVEGQIFLKKKKLMSLSEQQLVDCSGDEGNLGCGGGLMDNAFKYFIANKGIANEKSY 196

Query: 186 PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKS 244
           PYT KD  CK+        +    ++    ED+L+ AV  V PVSVA +     F+FY+S
Sbjct: 197 PYTAKDNDCKYKKSMSVATISSFKDVKHKDEDQLKMAVANVGPVSVAIDASSSKFQFYES 256

Query: 245 GVYSSTKCGNTPMDVNHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGK-NM 301
           GVY    C +  +D  H V+AVGYG +   G+ +WL+KNSW  +WG +GY KM   K N 
Sbjct: 257 GVYYDENCSSEVLD--HGVLAVGYGTDKKSGMDFWLVKNSWAASWGLNGYIKMARNKDNN 314

Query: 302 CGIATCASYPVV 313
           CGIAT ASYP+V
Sbjct: 315 CGIATMASYPIV 326


>gi|68399197|ref|XP_695425.1| PREDICTED: cathepsin L [Danio rerio]
          Length = 349

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 138/216 (63%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++ VKDQG+CGSCW+FSTTG++E   ++  G+ +SLSEQQLVDC++++   G
Sbjct: 137 IDYRAKGYVTEVKDQGYCGSCWSFSTTGAIEGQMYKHTGRLVSLSEQQLVDCSRSYGTYG 196

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQ-VLDSVNITLGAEDEL 219
           C+G   + A++Y+  N  L++ + YPYT  D    F  +N+ +  + D   +  G E  L
Sbjct: 197 CSGAWMANAYDYV-INNALESSDTYPYTSVDTQPCFYEKNLAMAGISDYRFVPAGNEQAL 255

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
             AV  V PVSVA +  +  F FY SG+Y  + C   P ++NHAV+ VGYG E+G  YW+
Sbjct: 256 ADAVATVGPVSVAIDADNPSFLFYSSGIYKESNC--NPNNLNHAVLVVGYGSEEGTDYWI 313

Query: 279 IKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           IKNSWG  WG+ GY +M   GKN CGIA+ A YP++
Sbjct: 314 IKNSWGTGWGEGGYMRMIRNGKNTCGIASYALYPII 349


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 161/306 (52%), Gaps = 67/306 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSY------------------------ 103
           ++GK Y  ++E + RF  F +NL  I   N +  +Y                        
Sbjct: 41  KHGKAYNGIDEREKRFQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEEYRALYLGTRS 100

Query: 104 --------------RLGLN----------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                         R  +N                ++PVK+QG CGSCW FST  ++E  
Sbjct: 101 PPARRVMKAKTASRRYAVNNLDRLPESMDWRTRGAVAPVKNQGSCGSCWAFSTIAAVEGI 160

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
                G+ ISLSEQ+LV C + +N+ GCNGGL   AF++I  NGGLDTEE YPY   DG 
Sbjct: 161 NQIVTGELISLSEQELVSCDKKYNS-GCNGGLMDYAFQFIIDNGGLDTEEDYPYEAFDGQ 219

Query: 194 CKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTK 251
           C  + +N  V  +D+  ++    E+ L+ AV   +PVSVA E      + Y+SGV++  K
Sbjct: 220 CDPTRKNAKVVSIDAYEDVPANDEESLKKAVAH-QPVSVAIEASGLALQLYQSGVFTG-K 277

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME-----MGKNMCGIAT 306
           CG+    ++H VVAVGYG E+GV YWL++NSWG +WG+ GYFK+E     + +  CGIA 
Sbjct: 278 CGSA---LDHGVVAVGYGKENGVDYWLVRNSWGTSWGEDGYFKLERNVKHITEGKCGIAM 334

Query: 307 CASYPV 312
            ASYPV
Sbjct: 335 QASYPV 340


>gi|351712164|gb|EHB15083.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/228 (46%), Positives = 138/228 (60%), Gaps = 14/228 (6%)

Query: 90  LDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
           L L++S + +   Y     ++PVK+QG CG+CW FS TGSLE    Q  G+ +SLSEQ L
Sbjct: 57  LQLLKSVDWREKGY-----VTPVKNQGQCGTCWAFSATGSLEGQMFQKTGQLVSLSEQNL 111

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV 209
           VDC++   NQGCNGGL   AFEY+K N GL++E+ YPY GKDG CK+  E         V
Sbjct: 112 VDCSRPQGNQGCNGGLMDFAFEYVKENKGLESEKFYPYEGKDGSCKYKPELSAANDTGFV 171

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           +I+   E  L  AV    P+SVA +  +  F+FYK G+Y   +C  +  D+NH V+ +GY
Sbjct: 172 DISQ-REKALMKAVAEEGPISVAVDAGLTSFQFYKDGIYFDPEC--SSKDLNHGVLVLGY 228

Query: 269 GVE----DGVPYWLIKNSWGENWGDHGYFKMEMGKNM-CGIATCASYP 311
           G E    +   YWL+KNS G  WG  GY K+   +N  CGIAT ASYP
Sbjct: 229 GYEEVNSEKNEYWLVKNSSGPEWGAKGYMKIAGNRNKHCGIATAASYP 276


>gi|410303012|gb|JAA30106.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|193786743|dbj|BAG52066.1| unnamed protein product [Homo sapiens]
          Length = 333

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|15214962|gb|AAH12612.1| Cathepsin L1 [Homo sapiens]
 gi|61363426|gb|AAX42388.1| cathepsin L [synthetic construct]
 gi|123988681|gb|ABM83856.1| cathepsin L [synthetic construct]
 gi|123999196|gb|ABM87178.1| cathepsin L [synthetic construct]
          Length = 333

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|94733563|emb|CAK11015.1| novel protein similar to vertebrate cathepsin L (CTSL) [Danio
           rerio]
          Length = 334

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 138/216 (63%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++ VKDQG+CGSCW+FSTTG++E   ++  G+ +SLSEQQLVDC++++   G
Sbjct: 122 IDYRAKGYVTEVKDQGYCGSCWSFSTTGAIEGQMYKHTGRLVSLSEQQLVDCSRSYGTYG 181

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQ-VLDSVNITLGAEDEL 219
           C+G   + A++Y+  N  L++ + YPYT  D    F  +N+ +  + D   +  G E  L
Sbjct: 182 CSGAWMANAYDYV-INNALESSDTYPYTSVDTQPCFYEKNLAMAGISDYRFVPAGNEQAL 240

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
             AV  V PVSVA +  +  F FY SG+Y  + C   P ++NHAV+ VGYG E+G  YW+
Sbjct: 241 ADAVATVGPVSVAIDADNPSFLFYSSGIYKESNC--NPNNLNHAVLVVGYGSEEGTDYWI 298

Query: 279 IKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           IKNSWG  WG+ GY +M   GKN CGIA+ A YP++
Sbjct: 299 IKNSWGTGWGEGGYMRMIRNGKNTCGIASYALYPII 334


>gi|60827856|gb|AAX36816.1| cathepsin L [synthetic construct]
          Length = 334

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|226496089|ref|NP_001149658.1| cysteine protease 1 precursor [Zea mays]
 gi|195629242|gb|ACG36262.1| cysteine protease 1 precursor [Zea mays]
          Length = 469

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/311 (37%), Positives = 157/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +G+ Y +V E + RF  F  NL  + + N        S+RLGLN         
Sbjct: 46  YAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLTNDE 105

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ +KDQG CGSCW FST 
Sbjct: 106 YRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAVAEIKDQGSCGSCWAFSTI 165

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N QGCNGGL   AFE+I  NGG+DTEE YPY
Sbjct: 166 AAVEGINQIVTGDMISLSEQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGIDTEEDYPY 224

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
            G DG C  + +N  V  +DS  ++   +E  LQ AV   +P+SVA E     F+ Y SG
Sbjct: 225 KGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVA-NQPISVAIEAGGRAFQLYNSG 283

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++ T CG     ++H V AVGYG E+G  YW++KNSWG +WG+ GY +ME         
Sbjct: 284 IFTGT-CGTA---LDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGK 339

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 340 CGIAVEPSYPL 350


>gi|162138968|ref|NP_001104662.1| uncharacterized protein LOC567623 precursor [Danio rerio]
 gi|158254065|gb|AAI54241.1| Zgc:174153 protein [Danio rerio]
          Length = 336

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 9/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQ  CGSCW+FS+TG+LE    +  GK IS+SEQ LVDC++   NQGCNGGL   
Sbjct: 127 VTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQNLVDCSRPQGNQGCNGGLMDL 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLD+E++YPY  +D + C++       +    V+I  G E  L +AV  V 
Sbjct: 187 AFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKSTGFVDIPSGNEPALMNAVAAVG 246

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVPYWLIKNS 282
           PVSVA +      +FY+SG+Y    C ++ +D  HAV+ VGYG +     G  YW++KNS
Sbjct: 247 PVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGYGYQGADVAGNRYWIVKNS 304

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W + WGD GY  M   K N CG+AT ASYP++
Sbjct: 305 WSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|426219849|ref|XP_004004130.1| PREDICTED: cathepsin L1 isoform 1 [Ovis aries]
 gi|426219851|ref|XP_004004131.1| PREDICTED: cathepsin L1 isoform 2 [Ovis aries]
          Length = 334

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 151/279 (54%), Gaps = 24/279 (8%)

Query: 51  QVIGQARHALSFARFA------RRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGL 101
           Q   Q +H  S A  A        + ++    +  K +     +    +D+ +S +    
Sbjct: 64  QEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKRKKGKLFREPLLIDVPKSVDWTKK 123

Query: 102 SYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGC 161
            Y     ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   NQGC
Sbjct: 124 GY-----VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGC 178

Query: 162 NGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           NGGL   AF+YIK NGGLD+EE+YPY   D   C +  E         V+I    E  L 
Sbjct: 179 NGGLMDNAFQYIKENGGLDSEESYPYLATDTSSCNYKPECSAANDTGFVDIPQ-REKALM 237

Query: 221 HAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVP 275
            AV  V P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E    +   
Sbjct: 238 KAVATVGPISVAIDAGHASFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGTDSNNNK 295

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 296 FWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|327289213|ref|XP_003229319.1| PREDICTED: cathepsin S-like [Anolis carolinensis]
          Length = 333

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 154/304 (50%), Gaps = 57/304 (18%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLN------------ 108
           + ++Y K Y++ EE  +R   + KNL  +   N +   GL SY LG+N            
Sbjct: 32  WKKKYNKEYQNKEEEGVRRVIWEKNLRFVMLHNLEQSLGLHSYELGMNHLGDMTSEEVTA 91

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++ VK+QG CGSCW FS  G+LE
Sbjct: 92  LMTGLKIPVSQSRNSTLYWARQGASAPDTVDWREKGCVTNVKNQGSCGSCWAFSAVGALE 151

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
                  G  +SLS Q LVDC+ AF N GCNGG  S AF+Y+ YN G+D+E +YPYTG+ 
Sbjct: 152 CQLKLKTGNLVSLSPQNLVDCSSAFGNHGCNGGYISAAFQYVIYNNGIDSEASYPYTGQS 211

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
           G C+++ +         V++  G E  L+ AV    PVSVA +     F  ++ GVY   
Sbjct: 212 GTCRYNLQGRAATCSRYVDLPSGNEAALKDAVANFGPVSVAIDASRPSFFLFRKGVYDDP 271

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCAS 309
            C  T   +NH V+ VGYG EDG+ YWL+KNSWG ++GD GY K+     N CGIA+  +
Sbjct: 272 SC--TSAHINHGVLVVGYGTEDGIDYWLVKNSWGVSFGDQGYIKIARNHDNRCGIASQCT 329

Query: 310 YPVV 313
           YP++
Sbjct: 330 YPLM 333


>gi|4503155|ref|NP_001903.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|22202619|ref|NP_666023.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|384081592|ref|NP_001244900.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|384081594|ref|NP_001244901.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|332832229|ref|XP_003312197.1| PREDICTED: cathepsin L1 isoform 2 [Pan troglodytes]
 gi|332832233|ref|XP_001137800.2| PREDICTED: cathepsin L1 isoform 1 [Pan troglodytes]
 gi|397470218|ref|XP_003806728.1| PREDICTED: cathepsin L1 isoform 1 [Pan paniscus]
 gi|397470220|ref|XP_003806729.1| PREDICTED: cathepsin L1 isoform 2 [Pan paniscus]
 gi|397470222|ref|XP_003806730.1| PREDICTED: cathepsin L1 isoform 3 [Pan paniscus]
 gi|410042824|ref|XP_003951515.1| PREDICTED: cathepsin L1 [Pan troglodytes]
 gi|115741|sp|P07711.2|CATL1_HUMAN RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|29715|emb|CAA30981.1| pro-(cathepsin L) [Homo sapiens]
 gi|190418|gb|AAA66974.1| preprocathepsin L precursor [Homo sapiens]
 gi|31873292|emb|CAD97637.1| hypothetical protein [Homo sapiens]
 gi|48146223|emb|CAG33334.1| CTSL [Homo sapiens]
 gi|119583135|gb|EAW62731.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583136|gb|EAW62732.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583137|gb|EAW62733.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583138|gb|EAW62734.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583140|gb|EAW62736.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|208965934|dbj|BAG72981.1| cathepsin L1 [synthetic construct]
 gi|410303006|gb|JAA30103.1| cathepsin L1 [Pan troglodytes]
 gi|410303008|gb|JAA30104.1| cathepsin L1 [Pan troglodytes]
 gi|410303010|gb|JAA30105.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 122 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 179

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G+E  L+
Sbjct: 180 CGGGYMTNAFQYVQKNRGIDSEDAYPYIGEDESCMYNPTGKAAKCRGYREIPEGSEKALK 239

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 240 RAVARVGPVAVAIDASLSSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQRGTKHWII 297

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE WG+ GY  M   K N CGIA  AS+P
Sbjct: 298 KNSWGEQWGNKGYILMARNKNNACGIANLASFP 330


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFEYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSRGVYFDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|157093355|gb|ABV22332.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 162/315 (51%), Gaps = 66/315 (20%)

Query: 58  HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------- 108
           + + F  F  +YGK+Y  + E  +RF  F  N+D+I +TN + L++ LG+N         
Sbjct: 23  YMMMFNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTFALGVNEFTDLTQEE 82

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++PVK+QG CGSCW+FSTT
Sbjct: 83  LAASYTGLKPASLWSGLPRLSTHEYNGAPLASSVDWTTQGVVTPVKNQGQCGSCWSFSTT 142

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE A+  + G  +SLSEQQ VDC     + GCNGG    AF + K N  + TE +YPY
Sbjct: 143 GALEGAWALSTGNLVSLSEQQFVDCDT--TDSGCNGGWMDNAFSFAKKN-SICTEGSYPY 199

Query: 188 TGKDGVCKFSSENVGVQ---VLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYK 243
           T  DG C  S   VG+    V+   +++  +E  +  AV   +PVS+A E     F+ Y 
Sbjct: 200 TATDGTCNLSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQ-QPVSIAIEADQYSFQLYS 258

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCG 303
           SGV +++ CG     ++H V+AVGYG E G  YW +KNSWG +WG+ GY +++ GK   G
Sbjct: 259 SGVLTAS-CGTR---LDHGVLAVGYGSEAGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAG 314

Query: 304 ----IATCASYPVVA 314
               +A   SYPVV+
Sbjct: 315 ECGLLAGPPSYPVVS 329


>gi|33242884|gb|AAQ01146.1| cathepsin [Petromyzon marinus]
          Length = 333

 Score =  190 bits (482), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +RL   ++PVK+QG CGS W FS TGSLE  +  A G   SLSEQQLVDC +++ N G
Sbjct: 121 VDWRLKGYVTPVKEQGLCGSSWAFSATGSLEGQHFAATGNLTSLSEQQLVDCTKSYYNNG 180

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE-L 219
           CNGG   +A +YI  N G+D+E +YPY   DG C+F   NV  +      +   + +E L
Sbjct: 181 CNGGRSERALQYIIDNNGIDSELSYPYEHADGKCRFKPANVATKCSSYQFVEPSSNEEVL 240

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV  V P+++A    +D F+ YKSG+++   C  +P   NHA++ VGYG   G  +W+
Sbjct: 241 RQAVASVGPIAIAMNADLDTFKHYKSGLFNEPSCDKSP---NHAMLVVGYGSLSGNDFWI 297

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWGE+WG+ GY  M   K N CGIA+   YP++
Sbjct: 298 VKNSWGEDWGEKGYIYMIRNKDNQCGIASIGIYPII 333


>gi|7271897|gb|AAF44679.1|AF239268_1 cathepsin L, partial [Fasciola gigantica]
          Length = 219

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQ  CGSCW FSTTG++E  + +  G  +S SEQQLVDC+  F N G
Sbjct: 5   IDWRDSGYVTKVKDQEDCGSCWAFSTTGTMEGQFMKNIGFNVSFSEQQLVDCSSDFGNNG 64

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   A+EY++   GL+ E  YPY   +G C++       +V     +  G E ELQ
Sbjct: 65  CRGGLMEIAYEYLR-RFGLEIESTYPYRAVEGPCRYDRRLGVAKVTGYYIVHSGDEVELQ 123

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
           + VG+  P +VA +V   F  Y+SG+Y S  C  +P  +NH V+AVGYG + G  YW++K
Sbjct: 124 NLVGIEGPAAVALDVESDFVMYRSGIYQSQTC--SPDRLNHGVLAVGYGTQSGTDYWIVK 181

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
           NSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct: 182 NSWGTWWGEGGYIRMVRNRGNMCGIASMASLPMVA 216


>gi|144905112|dbj|BAF56429.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/334 (34%), Positives = 167/334 (50%), Gaps = 70/334 (20%)

Query: 34  IRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLI 93
           I  V S  L + ETS+++     RH     ++  +Y K+Y+   E + RF  F  N++ I
Sbjct: 22  ISRVISRELHETETSLIE-----RHE----QWMAKYDKVYKDAAEKEKRFLIFKDNVEFI 72

Query: 94  RSTNCKG-LSYRLGLN-------------------------------------------- 108
            S N  G   Y+LG+N                                            
Sbjct: 73  ESFNAAGNKPYKLGVNHLADLTIEEFKASRNGLKRSYDYEVGTTSFKYENVTAIPASVDW 132

Query: 109 -----ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
                ++P+KDQG CGSCW FST  + E  +  + GK +SLSEQ+LVDC +   +QGC G
Sbjct: 133 RKKGAVTPIKDQGQCGSCWAFSTVAATEGIHKISTGKLVSLSEQELVDCDRKGTDQGCEG 192

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           G     FE+I  NGG+ TE  YPY   DG CK ++     Q+     + + +E  L  AV
Sbjct: 193 GYMEDGFEFIIKNGGITTEANYPYKAVDGSCK-NATAPAAQIKGYEKVPVNSEKALLKAV 251

Query: 224 GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
              +PVSV+ +  DG F FY SG+++  +CG    +++H V AVGYG  +G  YW++KNS
Sbjct: 252 A-NQPVSVSIDAADGSFMFYSSGIFTG-ECGT---ELDHGVTAVGYGRANGTDYWIVKNS 306

Query: 283 WGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           WG  WG+ GY +M+ G    + +CGIA  +SYP 
Sbjct: 307 WGTVWGEQGYIRMQRGIAAKEGLCGIAMDSSYPT 340


>gi|340370270|ref|XP_003383669.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 326

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 130/214 (60%), Gaps = 4/214 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW+FS+TGSLE  +    G   SLSEQQL+DC+ +F N G
Sbjct: 112 VDWREKGAVTEVKNQGKCGSCWSFSSTGSLEGQHFLKTGTLSSLSEQQLMDCSTSFGNHG 171

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   +F Y++   G  +EE YPYT +DG C++ S     +     +I  G ED L+
Sbjct: 172 CKGGLMDNSFRYLETVAGDMSEEMYPYTAEDGFCRYRSSEAIAKDTGYKDIPRGDEDALK 231

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +     F+ Y  G+Y    C +T +D  H V+AVGYG  +G  YWL+
Sbjct: 232 EAVATVGPISVAIDAGHRSFQLYHEGIYYEPACSSTKLD--HGVLAVGYGTGEGEEYWLV 289

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           KNSWG +WG+ GY  M   + N CGIAT ASYP 
Sbjct: 290 KNSWGPSWGNEGYVMMSRNRENNCGIATQASYPT 323


>gi|321478980|gb|EFX89936.1| hypothetical protein DAPPUDRAFT_309603 [Daphnia pulex]
          Length = 584

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 154/304 (50%), Gaps = 51/304 (16%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           +F  F R + K Y++  E + R   F +N+  I S N  GL+Y+L  N            
Sbjct: 281 TFDSFVRHHKKGYKNTTEHENRKDIFRQNMRFIHSKNRAGLTYKLAPNHMTDRSSDEIRY 340

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVKDQ  CGSCW+F T G+LE
Sbjct: 341 MRGKLRSNGFNGGSTFHYTKSDVENLPEQMDWRLYGAVTPVKDQSVCGSCWSFGTVGTLE 400

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGK 190
            A     GK   LS+Q LVDC+  F N GC+GG   + ++++  +GG+ +EE+Y PY G 
Sbjct: 401 GALFLKTGKLTPLSQQALVDCSWGFGNNGCDGGEDFRVYQWMMKHGGIPSEESYGPYLGA 460

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSS 249
           DG C   +  +   +   VN+T G  D L+ A+    P+SVA +     F FY +GVY +
Sbjct: 461 DGYCHVDNATLVASIKGYVNVTSGDVDALRVAIFKYGPISVAIDAAHRAFSFYANGVYYN 520

Query: 250 TKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 309
            +CG+    ++HAV+AVGYG+  G PYWL+KNSW   WG+ GY  M   +N CG+AT  +
Sbjct: 521 PECGSGEDSLDHAVLAVGYGILKGEPYWLVKNSWSTYWGNSGYVLMSQKENNCGVATSPT 580

Query: 310 YPVV 313
           Y ++
Sbjct: 581 YVIM 584


>gi|301769891|ref|XP_002920367.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281346353|gb|EFB21937.1| hypothetical protein PANDA_009084 [Ailuropoda melanoleuca]
          Length = 333

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 128/211 (60%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK QGHC SCW FS TG+LE    +  GK +SLSEQ LVDC+   NN GC GGL   
Sbjct: 126 VTPVKYQGHCQSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWPQNNDGCRGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF Y+K NGGLD+ E+YPY G++  CK+  E     +    +++   ED L   V  V P
Sbjct: 186 AFRYVKDNGGLDSAESYPYLGRNESCKYRPEKSAANLTTFWSVS-NKEDGLMTTVATVGP 244

Query: 229 VSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW 283
           VS A +  +  F+FYK G+Y    C +  +  NHAV+ VGYG E    +   YW+IKNSW
Sbjct: 245 VSAAVDSSLHSFQFYKKGIYYDPNCRSNRL--NHAVLVVGYGFEGEESENKKYWIIKNSW 302

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G NWG  GY  +   + N CGIAT AS+PVV
Sbjct: 303 GTNWGMKGYMLLAKDRDNHCGIATMASFPVV 333


>gi|410042826|ref|XP_003951516.1| PREDICTED: cathepsin L1 [Pan troglodytes]
          Length = 278

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 61  RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 120

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 121 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKA 179

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 180 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 237

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 238 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 278


>gi|66823245|ref|XP_644977.1| cysteine proteinase 5 precursor [Dictyostelium discoideum AX4]
 gi|166201986|sp|P54640.2|CYSP5_DICDI RecName: Full=Cysteine proteinase 5; Flags: Precursor
 gi|60473097|gb|EAL71045.1| cysteine proteinase 5 precursor [Dictyostelium discoideum AX4]
          Length = 344

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 164/332 (49%), Gaps = 75/332 (22%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           Q   + ++  +F  +   + K Y S EE   R+  F  N+D ++  N KG    LGLN  
Sbjct: 19  QQFSELQYRNAFTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNF 77

Query: 109 ----------------------------------------------ISPVKDQGHCGSCW 122
                                                         ++PVK+QG CG CW
Sbjct: 78  ADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSAASKDWRSEGAVTPVKNQGQCGGCW 137

Query: 123 TFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182
           +FSTTGS E A+ Q+ G+ +SLSEQ L+DC+    N GC+GGL + AFEYI  N G+DTE
Sbjct: 138 SFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE--NSGCDGGLMTYAFEYIINNNGIDTE 195

Query: 183 EAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRF 241
            +YPY  ++G C++ SEN G  +     +T G+E  L+ AV  V PVSVA +     F+ 
Sbjct: 196 SSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVN-VNPVSVAIDASHQSFQL 254

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-------------------PYWLIKNS 282
           Y SG+Y   +C +  +D  H V+AVGYG   G                     YW++KNS
Sbjct: 255 YTSGIYYEPECSSENLD--HGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNS 312

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG +WG  GY  M   + N CGIA+ AS+PVV
Sbjct: 313 WGTSWGIEGYILMSRNRDNNCGIASSASFPVV 344


>gi|27806673|ref|NP_776457.1| cathepsin L2 precursor [Bos taurus]
 gi|1542853|emb|CAA62870.1| cathepsin L [Bos taurus]
          Length = 334

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 131/212 (61%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   
Sbjct: 126 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK NGGLD+EE+YPY   D   C +  E         V+I    E  L  AV  V 
Sbjct: 186 AFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVG 244

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNS 282
           P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E    +   +W++KNS
Sbjct: 245 PISVAIDAGHTSFQFYKSGIYYDPDC--SCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNS 302

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 303 WGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|50355623|dbj|BAD29960.1| cysteine protease [Daucus carota]
          Length = 460

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 159/310 (51%), Gaps = 63/310 (20%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLN----------- 108
           ++  +  ++GK Y ++ E + RF  F  N   I   N  K  S++LGLN           
Sbjct: 43  AYESWLVKHGKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFKLGLNRFADLTNEEYR 102

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ VKDQG CGSCW FST 
Sbjct: 103 SKYTGIRTKDSRKKVSGKSQRYASLAGESLPESVDWREHGAVASVKDQGQCGSCWAFSTI 162

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E     A GK I+LSEQ+LVDC +++N +GCNGGL   AF++I  NGG+D++  YPY
Sbjct: 163 SAVEGINQIATGKLITLSEQELVDCDRSYN-EGCNGGLMDDAFQFIINNGGIDSDADYPY 221

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGV 246
           TG+DG C    +N  V  +DS       +++        +P+SVA E     F+FY SG+
Sbjct: 222 TGRDGQCDQYRKNAKVVTIDSYEDVPEYDEKALQKAAANQPISVAIEASGRDFQFYDSGI 281

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMC 302
           ++  KCG    D++H VV VGYG E+G  YW+++NSWG +WG+ GY +ME G      +C
Sbjct: 282 FTG-KCGT---DLDHGVVVVGYGTENGKDYWIVRNSWGADWGEKGYLRMERGISSKAGIC 337

Query: 303 GIATCASYPV 312
           GI +  SYPV
Sbjct: 338 GITSEPSYPV 347


>gi|426216526|ref|XP_004002513.1| PREDICTED: cathepsin S isoform 2 [Ovis aries]
          Length = 281

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 144/256 (56%), Gaps = 12/256 (4%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNISPVKDQGHCGS 120
           + + YGK YE   E   R   + KNL  +   N +   G+ SY LG+N   + D G CGS
Sbjct: 31  WKKTYGKQYEEKNEEVARRLIWEKNLKTVMLHNLEHSMGMHSYELGMN--HLGDMGACGS 88

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA-FNNQGCNGGLPSQAFEYIKYNGGL 179
           CW FS  G+LEA      GK +SLS Q LVDC+   + N+GCNGG  ++AF+YI  N G+
Sbjct: 89  CWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVKYGNKGCNGGFMTEAFQYIIDNNGI 148

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-G 238
           D+E +YPY   DG C++  +N        + +  G+E+ L+ AV    PVSV  +     
Sbjct: 149 DSEASYPYKAMDGRCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDAKQTS 208

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  YK+GVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+GD GY +M   
Sbjct: 209 FFLYKTGVYYDPSC---TQNVNHGVLVVGYGSLNGKDYWLVKNSWGLNFGDQGYIRMARN 265

Query: 299 K-NMCGIATCASYPVV 313
             N CGIA   SYP +
Sbjct: 266 SGNHCGIANFPSYPEI 281


>gi|355681660|gb|AER96816.1| cathepsin L2 [Mustela putorius furo]
          Length = 334

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/259 (43%), Positives = 149/259 (57%), Gaps = 26/259 (10%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSC 121
           F     R GK+++     +  FA   K++D  +    KG        ++PVK+QG CGSC
Sbjct: 95  FRNQKHRKGKVFQ-----EPLFAEIPKSVDWTQ----KGY-------VTPVKNQGQCGSC 138

Query: 122 WTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDT 181
           W FS TG+LE    +  GK +SLSEQ LVDC+++  NQGCNGGL   AF+YIK NGGLD+
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRSQGNQGCNGGLMDFAFQYIKDNGGLDS 198

Query: 182 EEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGF 239
           EE+YPY  +D   C +  E         V+I    E  L  AV  V P+SVA +     F
Sbjct: 199 EESYPYLARDTDSCNYKPEYSVANDTGFVDIPQ-RERALMKAVATVGPISVAIDAGHQSF 257

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKM 295
           +FYKSG+Y    C  +  D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM
Sbjct: 258 QFYKSGIYFDPDC--SSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGCNGYVKM 315

Query: 296 EMGK-NMCGIATCASYPVV 313
              + N CGIAT ASYP V
Sbjct: 316 AKDQNNHCGIATAASYPTV 334


>gi|348525618|ref|XP_003450319.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 330

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 138/231 (59%), Gaps = 5/231 (2%)

Query: 85  TFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
           +F+  +D + S   K + YR    ++ VK+QG CGSCW FS  G+LE    ++ GK + L
Sbjct: 103 SFTLAMDDMPSKIPKSVDYRKKGMVTSVKNQGACGSCWAFSAAGALEGQLAKSTGKLVDL 162

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQ 204
           S Q LVDC+  + N GCNGG  ++AF+Y+  N G+D++ +YPYTG+D  C+++       
Sbjct: 163 SPQNLVDCSGKYGNHGCNGGFMTRAFQYVIDNHGIDSDASYPYTGRDEQCRYNPATRAAN 222

Query: 205 VLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAV 263
                 +  G E+ L+ A+  + P+SVA +     F FY+SGVY+   C     +VNH V
Sbjct: 223 CSSYQFLPEGDENALKQALATIGPISVAIDARRPRFSFYRSGVYNDPSC---TQEVNHGV 279

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +AVGYG  +G  YWL+KNSWG  +GD GY +M     N CGIA  A YPV+
Sbjct: 280 LAVGYGSLNGQDYWLVKNSWGSTFGDQGYIRMARNTGNQCGIALYACYPVM 330


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NYG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   +VNHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSD--NVNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGESWGNKGYILMARNKNNACGIANLASFP 327


>gi|198432217|ref|XP_002130230.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 327

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 5/220 (2%)

Query: 97  NCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 156
           N   + +R    ++PVK+Q  CGSCW FSTTGSLE  +       +SLSEQQL+DC+   
Sbjct: 110 NPTSIDWRTRGYVTPVKNQLQCGSCWAFSTTGSLEGQHFAKTKNLVSLSEQQLMDCSFKE 169

Query: 157 NNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE 216
            ++GC GG+   AF+YI   GG+++E  YPY  ++  C+F + ++   +   V++T G+E
Sbjct: 170 GDEGCGGGIMDYAFDYIFLAGGVESEADYPYEARNDHCRFDNSSIAATLTGCVDVTSGSE 229

Query: 217 DELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP 275
            +L+ AVG + PVSVA +     F+ Y SGV     C  T +D  H V+AVGYG ++G  
Sbjct: 230 TQLEKAVGSIGPVSVAIDASHISFQLYGSGVNYEPMCSTTTLD--HGVLAVGYGADNGNE 287

Query: 276 YWLIKNSWGENWGD-HGYFKMEMGK-NMCGIATCASYPVV 313
           YW++KNSWGE WG  +GY KM   + N CGIAT ASYP V
Sbjct: 288 YWIVKNSWGEGWGHLNGYIKMSKNRNNNCGIATQASYPTV 327


>gi|281204231|gb|EFA78427.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 329

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 143/247 (57%), Gaps = 6/247 (2%)

Query: 69  YGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTG 128
           Y  +Y  +      FA     LD +       L +R    +  VKDQG CGSCW FSTTG
Sbjct: 84  YRAVYLGMNVDASNFAAQPATLDQVYQPVRSTLDWRNNGAVGRVKDQGQCGSCWAFSTTG 143

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           ++E A+  A G  +SLSEQQL+DC++++ N GC GGL   A  YI   GG++TEE+YPY 
Sbjct: 144 AVEGAHQIATGNFVSLSEQQLMDCSRSYGNHGCQGGLMDSAMSYIVKQGGINTEESYPYE 203

Query: 189 GKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGV 246
            +D   CK++  N G ++    NI  G+E +L   +  + PV++A +     F+ YKSGV
Sbjct: 204 MRDSYTCKYNPANNGAKLSGYSNIKRGSEADLAAKLN-IGPVAIALDASHSSFQLYKSGV 262

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIA 305
           +    C +T +  +H V+AVGYG E    YW++KNSWG  WGD GY  +   + N CG+A
Sbjct: 263 FYDPACSSTSL--SHGVLAVGYGTEGSSAYWIVKNSWGTRWGDAGYIWIAKDRNNHCGVA 320

Query: 306 TCASYPV 312
           T +S P+
Sbjct: 321 TMSSIPI 327


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 127/206 (61%), Gaps = 3/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VKDQG CGSCWTFSTTGS+EAA+    G  +SLSEQ LVDCA+     GC GG   +
Sbjct: 122 VTEVKDQGMCGSCWTFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKD-TCYGCGGGWMDK 180

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A EYI+  GG+ +E+ YPY G D  C+F    V  ++ +   I    E++L++AV    P
Sbjct: 181 ALEYIE-KGGIMSEKDYPYEGVDDNCRFDISKVAAKISNFTYIKKNDEEDLKNAVAAKGP 239

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           +SVA +    F+ Y SG+   T+C N    +NH V+ VGYG E+G  YW+IKNSWG NWG
Sbjct: 240 ISVAIDASATFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTENGKDYWIIKNSWGVNWG 299

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
             GY +M   K N CGI T   YP +
Sbjct: 300 MDGYIRMSRNKNNQCGITTDGVYPNI 325


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 138 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 195

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 196 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 255

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 256 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 313

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 314 KNSWGENWGNKGYILMARNKNNACGIANLASFP 346


>gi|258588539|pdb|3HWN|A Chain A, Cathepsin L With Az13010160
 gi|258588540|pdb|3HWN|B Chain B, Cathepsin L With Az13010160
 gi|258588541|pdb|3HWN|C Chain C, Cathepsin L With Az13010160
 gi|258588542|pdb|3HWN|D Chain D, Cathepsin L With Az13010160
          Length = 258

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 41  RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 100

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 101 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKA 159

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 160 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 217

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 218 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 258


>gi|208972992|dbj|BAG74345.1| silicatein-M4 [Ephydatia fluviatilis]
 gi|296168739|emb|CAQ54047.1| silicatein alpha 3 [Ephydatia muelleri]
          Length = 327

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/220 (43%), Positives = 139/220 (63%), Gaps = 4/220 (1%)

Query: 96  TNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA 155
           T    + +R    ++ V+ QG CGS + F+  G+LE A   A  K ++LSEQ ++DC+ A
Sbjct: 110 TYADSMDWRTRGAVTSVQSQGSCGSSYAFAAAGALEGANALAADKLVALSEQNIIDCSVA 169

Query: 156 FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGA 215
           + N GC+GG    AF+Y+  NGG+DT+ +YPY GK   C+++S+N+G      V IT G+
Sbjct: 170 YGNHGCSGGDVYTAFKYVVDNGGIDTDSSYPYKGKQYSCQYNSKNLGAVATGVVKITSGS 229

Query: 216 EDELQHAVGLVRPVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV 274
           E +L  AV  V P++VA +  V+ F FY+SGV+ S+ C  T +  NHA++  GYG  +G 
Sbjct: 230 ETDLLSAVASVGPIAVAVDATVNSFMFYQSGVFDSSSCSTTKL--NHAMLVTGYGSTNGK 287

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YWL+KNSWG  WG+ GY KM   K N CGIA+ A YP++
Sbjct: 288 DYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 327


>gi|37780047|gb|AAP32196.1| cysteine protease 8 [Trifolium repens]
          Length = 343

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 160/307 (52%), Gaps = 63/307 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL-SYRLGLN-------------- 108
           ++  +YGKIY+  +E + RF  F++N++ + ++N     SY+LG+N              
Sbjct: 41  QWMSQYGKIYKDHQERETRFKIFTENVNYVEASNADDTKSYKLGINQFADLTNEEFVASR 100

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVK+QG CG CW FS   + E 
Sbjct: 101 NKFKGHMCSSITRTTTFKYENVSAIPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEG 160

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            +  + GK ISLSEQ+LVDC     +QGC GGL   AF++I  N GL TE  YPY G DG
Sbjct: 161 IHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDG 220

Query: 193 VCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  +  +V  V +    ++   +E  LQ AV   +P+SVA +     F+FYKSGV++ +
Sbjct: 221 TCNANKASVQAVTITGYEDVPANSEQALQKAVA-NQPISVAIDASGSDFQFYKSGVFTGS 279

Query: 251 KCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIA 305
            CG    +++H V AVGYGV  DG  YWL+KNSWG +WG+ GY  M+ G    + +CGIA
Sbjct: 280 -CGT---ELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGVEAAEGLCGIA 335

Query: 306 TCASYPV 312
             ASYP 
Sbjct: 336 MQASYPT 342


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 133 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 191 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 250

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 251 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 308

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 309 KNSWGENWGNKGYILMARNKNNACGIANLASFP 341


>gi|558563|emb|CAA57538.1| cysteine proteinase [Cicer arietinum]
          Length = 325

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 160/311 (51%), Gaps = 67/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           + ++  ++ K+Y  + E   RF  F  NL  I   N +  SY++GLN             
Sbjct: 4   YEKWLVKHQKMYNGLGEKDTRFQIFKDNLRFIDEHNAQNYSYKVGLNKFADINNEEYRDM 63

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++ +KDQG CGSCW FST  
Sbjct: 64  YLGTKSDAKRRVMKTKITGHRITYNSVIVTVKVDWRLKGAVTHIKDQGSCGSCWAFSTIA 123

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           ++EA      GK +SLSEQ+LVDC +AFN +GCNGGL   AFE+I  NGG+DT++ YPY 
Sbjct: 124 TVEAINKIVTGKFVSLSEQELVDCDRAFN-EGCNGGLMDYAFEFIIRNGGIDTDQDYPYN 182

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVY 247
           G +  C  + +N  V  +D         + L+ AV   +PVSVA   +    + Y+SGV+
Sbjct: 183 GFERKCDPTKKNAKVVSIDGYEDVPSYMNALKKAVAH-QPVSVAIAGLGRALQLYQSGVF 241

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNM------ 301
           +  KCG    D++H VV VGYG E+GV YWL++NSWG NWG+ GYFK+   +N+      
Sbjct: 242 TG-KCGT---DLDHGVVVVGYGSENGVDYWLVRNSWGTNWGEDGYFKI-ASRNVKSLYRK 296

Query: 302 CGIATCASYPV 312
           CGIA  ASYPV
Sbjct: 297 CGIAMEASYPV 307


>gi|383410403|gb|AFH28415.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 131/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 SKYWLGKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|300121328|emb|CBK21708.2| unnamed protein product [Blastocystis hominis]
          Length = 318

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 154/304 (50%), Gaps = 61/304 (20%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  +  +YGK Y + EE + R   F+ NL  I+  N K L + LG+N             
Sbjct: 22  FTSYMSKYGKTYAAPEEARYRLRVFNDNLLKIKEHNAKNLPWTLGVNKFADVSAEEFAYK 81

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            ++PVK+QG CGSCW FSTTG+ E AY 
Sbjct: 82  FCGCAKDPKTRGTRQTTLVGDVPARVDWREQGAVTPVKNQGMCGSCWAFSTTGTTEGAYF 141

Query: 136 QAFGKGISLSEQQLVDCAQ--AFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
              G  +SLSEQQLVDCA+   + N GC+GG P  A +Y+  + GL TEE YPY G D  
Sbjct: 142 LKTGNLVSLSEQQLVDCARDPEYENFGCSGGWPWSAVDYVTKH-GLCTEEDYPYKGVDAE 200

Query: 194 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG 253
           CK SS  V VQ +D V + +G ED L  AV    PVS+  +     + Y  G+   T+C 
Sbjct: 201 CKESSCKVAVQSVDKVQLPVGDEDSLAVAVSKT-PVSIVLDAT-AMQLYDKGII--TRCS 256

Query: 254 NTPMDVNHAVVAVGY--GVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCA 308
            +   +NHAV+AVGY    E G+ YW+IKNSWG +WG+ GY ++E    G   C +   +
Sbjct: 257 ES---INHAVLAVGYDKDAETGLKYWIIKNSWGADWGEEGYCRIEKDVGGMGRCALTYSS 313

Query: 309 SYPV 312
            YPV
Sbjct: 314 VYPV 317


>gi|10336513|dbj|BAB13759.1| cysteine proteinase [Astragalus sinicus]
          Length = 343

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 158/303 (52%), Gaps = 63/303 (20%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRLGLN------------------ 108
           +Y KIY   +E + RF  F +N++ I ++N +G   Y+LG+N                  
Sbjct: 45  QYAKIYNDHQEWEKRFQIFKENVNYIETSNKEGGRFYKLGVNQFVDLTNEEFIAPRNRFK 104

Query: 109 --------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQ 136
                                           ++PVKDQG CG CW FS   + E  +  
Sbjct: 105 GHMCSSIIRTNTYKYENVTTVPSNVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGIHQL 164

Query: 137 AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
           + GK ISLSEQ+LVDC     +QGC GGL   AF++I  N GLDTE  YPY G DG C  
Sbjct: 165 STGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLDTEAKYPYQGVDGTCNA 224

Query: 197 SSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGN 254
           +  ++    + S  ++    E  LQ AV   +P+SVA +     F+FY SGV++ + CG 
Sbjct: 225 NEASINAATITSYEDVPTNNEQALQKAVA-NQPISVAIDASGSDFQFYTSGVFTGS-CGT 282

Query: 255 TPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCAS 309
              +++H V AVGYGV +DG  YWL+KNSWG +WG+ GY +M+ G    + +CGIA  AS
Sbjct: 283 ---ELDHGVTAVGYGVSDDGTKYWLVKNSWGTSWGEEGYIRMQRGVDAVEGLCGIAMQAS 339

Query: 310 YPV 312
           YP+
Sbjct: 340 YPI 342


>gi|340728972|ref|XP_003402785.1| PREDICTED: counting factor associated protein D-like [Bombus
           terrestris]
          Length = 549

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 171/360 (47%), Gaps = 65/360 (18%)

Query: 3   RPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSF 62
           +P   V  V   + C              NP+R    + + +++T V +         +F
Sbjct: 200 KPSSEVFEVTTNMTCVGFPGPGDKHVYTFNPMR----EFVHNYDTHVNE---------AF 246

Query: 63  ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------- 108
             F + + K Y +  +  +R   F +NL  I STN     Y+L +N              
Sbjct: 247 EDFKKAHNKEYVNHVDQLMRKEVFRQNLRFIHSTNRANKGYQLSVNHLVDRTELELKALR 306

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F TTG++E 
Sbjct: 307 GKQYTAHYNGGQPFPYNAEKEVTEVPDSLDWRLYGAVTPVKDQSVCGSCWSFGTTGAVEG 366

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           AY+  +GK + LS+Q L+DC+  + N GC+GG   +++++I  +GGL TE+ Y  Y G+D
Sbjct: 367 AYYMKYGKLVRLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGGLPTEDEYGGYLGQD 426

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
           G C  ++  +  ++   VN+T G  + L+ A+    P+SVA +     F FY  GVY   
Sbjct: 427 GYCHVNNVTLTAKITGYVNVTSGDANALKVAIAKHGPISVAIDASHKTFSFYSHGVYYDE 486

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            CGNT   ++HAV+AVGYG  +G  YWL+KNSW   WG+ GY  M   KN CG+ T  +Y
Sbjct: 487 SCGNTEESLDHAVLAVGYGSLNGKDYWLVKNSWSNYWGNDGYILMSQEKNNCGVLTAPTY 546


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 133 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 190

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 191 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 250

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 251 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 308

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 309 KNSWGENWGNKGYILMARNKNNACGIANLASFP 341


>gi|26245875|gb|AAN77413.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 287

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 127/206 (61%), Gaps = 4/206 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK QG CGSCW FSTTGS+E+      GK ISLSEQQLVDC +  NN GC GG    
Sbjct: 85  VTEVKSQGSCGSCWAFSTTGSVESHNFIKTGKLISLSEQQLVDCVK--NNSGCAGGWMDI 142

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           A EYI+ +G + +E+ YPY  ++  C+F++    VQ+     I    E +LQ AV L  P
Sbjct: 143 ALEYIEADGIM-SEDDYPYEERNTTCRFNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGP 201

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           V VA EV   F+ Y  G+ +  +C NT  D+ HAV+  GYG +DG  YW++KNSWG  +G
Sbjct: 202 VPVAIEVTIAFQLYARGILNDPQCKNTEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYG 261

Query: 289 DHGYFKMEM-GKNMCGIATCASYPVV 313
             GY +M     N CGIAT ASYPV+
Sbjct: 262 MDGYLRMSRNADNQCGIATRASYPVL 287


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 104 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 161

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 162 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 221

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 222 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 279

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 280 KNSWGENWGNKGYILMARNKNNACGIANLASFP 312


>gi|62955235|ref|NP_001017633.1| uncharacterized protein LOC550326 precursor [Danio rerio]
 gi|62202194|gb|AAH92817.1| Zgc:110239 [Danio rerio]
          Length = 546

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/272 (38%), Positives = 153/272 (56%), Gaps = 11/272 (4%)

Query: 45  FETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR 104
           F  SV  +  +++  LS  R  +R  K++   +        F   +  I + N   + +R
Sbjct: 284 FSLSVNHLADRSQKELSMMRGCQRTHKVHRKAQ-------PFPSEIRSIATPN--SVDWR 334

Query: 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGG 164
           L   ++PVKDQ  CGSCW+F+TTG+LE A     G+  SLS+Q LVDC   F N GC+GG
Sbjct: 335 LYGAVTPVKDQAVCGSCWSFATTGTLEGALFLKTGQLTSLSQQMLVDCTWGFGNNGCDGG 394

Query: 165 LPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
              +AFE+I  +GG+ T E+Y  Y G +G+C +   ++  Q+    N+T G    L+ A+
Sbjct: 395 EEWRAFEWIMKHGGISTAESYGAYMGMNGLCHYDKSSMVAQLTGYTNVTSGDILALKAAI 454

Query: 224 GLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
               PV+V+ +     F FY +GVY   +C N   D++HAV+AVGYG+ +   YWL+KNS
Sbjct: 455 FKFGPVAVSIDAAHRSFAFYSNGVYYEPECKNGINDLDHAVLAVGYGIMNNESYWLVKNS 514

Query: 283 WGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           W   WG+ GY  M M  N CG+AT A Y  +A
Sbjct: 515 WSSYWGNDGYILMSMKDNNCGVATDAIYATLA 546


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|209155876|gb|ACI34170.1| Digestive cysteine proteinase 2 precursor [Salmo salar]
          Length = 551

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/304 (35%), Positives = 152/304 (50%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  F  ++G+ Y    E + R   F  NL  + S N  GLS+ L +N             
Sbjct: 248 FGHFKEQFGRHYGDEREHEKREHAFVHNLRYVHSMNRAGLSFSLAVNSLSDLSMSELSAM 307

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F+TTG++E 
Sbjct: 308 RGRNRGKRPNNGLPFPMHLYTGVQVPDQLDWRLYGAVTPVKDQAICGSCWSFATTGAVEG 367

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           A     G    LS+Q LVDC+  F N GC+GG   +A+E+I  +GG+ T E Y  Y G +
Sbjct: 368 ALFLTSGSLQVLSQQMLVDCSWGFGNNGCDGGEEWRAYEWIMKHGGIATTETYGSYMGMN 427

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSST 250
           G+C F++  +  ++    N+T G  + L+ A+    PV+V+ +     F FY  GVY   
Sbjct: 428 GLCHFNTSQLTARIQSYTNVTSGDAEALKVALFKHGPVAVSIDAGHRSFVFYSHGVYYEP 487

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           KCGNT   ++HAV+AVGYGV +  PYWL+KNSW   WG+ GY  M M  N CG+ T A+Y
Sbjct: 488 KCGNTTDSLDHAVLAVGYGVMEAEPYWLVKNSWSTYWGNDGYILMSMKDNNCGVTTDATY 547

Query: 311 PVVA 314
             +A
Sbjct: 548 VTLA 551


>gi|198285481|gb|ACH85279.1| cathepsin l-like [Salmo salar]
          Length = 444

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/304 (35%), Positives = 152/304 (50%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  F  ++G+ Y    E + R   F  NL  + S N  GLS+ L +N             
Sbjct: 141 FGHFKEQFGRHYGDEREHEKREHAFVHNLRYVHSMNRAGLSFSLAVNSLSDLSMSELSAM 200

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F+TTG++E 
Sbjct: 201 RGRNRGKRPNNGLPFPMHLYTGVQVPDQLDWRLYGAVTPVKDQAICGSCWSFATTGAVEG 260

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           A     G    LS+Q LVDC+  F N GC+GG   +A+E+I  +GG+ T E Y  Y G +
Sbjct: 261 ALFLTSGSLQVLSQQMLVDCSWGFGNNGCDGGEEWRAYEWIMKHGGIATTETYGSYMGMN 320

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSST 250
           G+C F++  +  ++    N+T G  + L+ A+    PV+V+ +     F FY  GVY   
Sbjct: 321 GLCHFNTSQLTARIQSYTNVTSGDAEALKVALFKHGPVAVSIDAGHRSFVFYSHGVYYEP 380

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           KCGNT   ++HAV+AVGYGV +  PYWL+KNSW   WG+ GY  M M  N CG+ T A+Y
Sbjct: 381 KCGNTTDSLDHAVLAVGYGVMEAEPYWLVKNSWSTYWGNDGYILMSMKDNNCGVTTDATY 440

Query: 311 PVVA 314
             +A
Sbjct: 441 VTLA 444


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|19698257|dbj|BAB86771.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 134/215 (62%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    +SP+K+QG CGSCW+FS TG+LE+      G   SLSEQQLVDC+  + N G
Sbjct: 114 VDWRTSGCVSPIKNQGQCGSCWSFSATGALESQTCLRRGYLPSLSEQQLVDCSGPYGNYG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT-LGAEDEL 219
           CNGG P  AF+Y++ NGG+D+E  YPY  + G C ++S           ++T +G+E  L
Sbjct: 174 CNGGWPDHAFQYVQANGGIDSESYYPYQARVGTCHYNSAYSAATCSGYQDVTPVGSESAL 233

Query: 220 QHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           Q+ V  V P+S+A +   G++ Y+SGV++   C  T    +HAV+ VGYG  +G  YWL+
Sbjct: 234 QYYVANVGPLSIAID-ASGWQSYQSGVFNDPSCSQT---ADHAVLLVGYGTYNGQDYWLV 289

Query: 280 KNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 313
           KNSWG  WG+ GY  M     N CGIA  ASYP+V
Sbjct: 290 KNSWGTWWGEQGYIMMARNANNQCGIANHASYPLV 324


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|348565223|ref|XP_003468403.1| PREDICTED: cathepsin L1-like [Cavia porcellus]
          Length = 333

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VK+QG CGSCW FS TGSLE       G  +SLSEQ LVDC++   N
Sbjct: 116 KSVDWREKGYVTEVKNQGQCGSCWAFSATGSLEGQMFHKTGNLVSLSEQNLVDCSRPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+Y+K N GL+ E++YPY GKDG CK+  E         V++    E  
Sbjct: 176 QGCNGGLMDFAFQYVKDNKGLEAEKSYPYVGKDGECKYKPELSAANDTGFVDVPQ-REKV 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-- 275
           +Q A+  V P+SVA +  +  F+FYK G+Y    C  +  D+NH V+ VGYG +      
Sbjct: 235 VQKALATVGPLSVAIDAGLQSFQFYKEGIYYDPGC--SSRDLNHGVLLVGYGTDASETGK 292

Query: 276 --YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWLIKNSWG  WG  GY K+   + N CG+AT ASYP+V
Sbjct: 293 GDYWLIKNSWGTTWGADGYVKIARNRNNHCGVATAASYPLV 333


>gi|148745204|gb|AAI42984.1| Cathepsin L1 [Homo sapiens]
          Length = 333

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|313754424|pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible
           Inhibition Of Human Cathepsin L By Their Respective
           Dipeptidyl Glyoxal And Diazomethylketone Inhibitors
 gi|313754425|pdb|3OF9|A Chain A, Structural Basis For Irreversible Inhibition Of Human
           Cathepsin L By A Diazomethylketone Inhibitor
          Length = 221

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 4   RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 63

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 64  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKA 122

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 123 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 180

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 181 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 221


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|836934|gb|AAA95998.1| cathepsin X [Homo sapiens]
          Length = 329

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 177 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 237 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYILMARNKNNACGIANLASFP 327


>gi|344258279|gb|EGW14383.1| Cathepsin L1 [Cricetulus griseus]
          Length = 295

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 132/218 (60%), Gaps = 6/218 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVKDQG CG+CW FS  GSL        GK + LSEQ LVDC+ +  N
Sbjct: 81  KSVDWRKHGYVTPVKDQGSCGACWAFSAVGSLVGQMFWKTGKLVPLSEQNLVDCSWSHGN 140

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL   AF+Y+  NGGLDT E+YPY  ++  C+++ EN    V   V I    E  
Sbjct: 141 IGCHGGLMQNAFQYVMDNGGLDTSESYPYESRNTTCRYNPENSAANVTGFVKIP-ANEYS 199

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPY 276
           L  AV +V P+S A +     F+FY+ G+Y   +C ++ +D  HAV+ VGYG E DG  Y
Sbjct: 200 LMKAVAIVGPISAAIDTKHHSFQFYRGGMYYEPECSSSNLD--HAVLVVGYGEESDGRKY 257

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSWG  WG +GY KM   + N CGIAT A YP V
Sbjct: 258 WLVKNSWGTYWGMNGYIKMARDRNNNCGIATYAMYPTV 295


>gi|62955291|ref|NP_001017661.1| cathepsin S, b.2 precursor [Danio rerio]
 gi|62204682|gb|AAH93339.1| Cathepsin S, b.2 [Danio rerio]
 gi|182891354|gb|AAI64362.1| Ctssb.2 protein [Danio rerio]
          Length = 330

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 128/215 (59%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++ VK+QG CGSCW FS+ G+LE    +  GK + LS Q LVDC+  + N G
Sbjct: 119 LDWRDKGYVTSVKNQGACGSCWAFSSVGALEGQLMKTTGKLVDLSPQNLVDCSSKYGNLG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG  SQAF+Y+  NGG+D+E +YPY G  G C++              ++ G E  L+
Sbjct: 179 CNGGYMSQAFQYVIDNGGIDSESSYPYQGTQGSCRYDPSQRAANCTSYKFVSQGDEQALK 238

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            A+  + PVSVA +     F FY+SGVY    C      VNH V+AVGYG   G  YWL+
Sbjct: 239 EALANIGPVSVAIDATRPQFIFYRSGVYDDPSC---TQKVNHGVLAVGYGTLSGQDYWLV 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG  +GD GY ++   K NMCGIA+ A YP+V
Sbjct: 296 KNSWGAGFGDGGYIRIARNKNNMCGIASEACYPIV 330


>gi|297852302|ref|XP_002894032.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
 gi|297339874|gb|EFH70291.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/360 (36%), Positives = 175/360 (48%), Gaps = 74/360 (20%)

Query: 11  VILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYG 70
           VIL L   A ASA   S    +    VS+ G R  +  V+ +         +  +  ++G
Sbjct: 2   VILFLAMVAVASAVDMSIISYDEKHGVSTTGGRS-DAEVMSI---------YEAWLVKHG 51

Query: 71  KIYE--SVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------------- 108
           K     S+ E   RF  F  NL  I   N K LSYRLGL                     
Sbjct: 52  KAQNQNSLVEKDRRFEIFKDNLRFIDDHNKKNLSYRLGLTRFADLTNDEYRSKYLGAKME 111

Query: 109 ------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
                                         ++ VKDQG CGSCW FST G++E       
Sbjct: 112 KKGERRTSQRYEARVGDELPESIDWRKKGAVAEVKDQGSCGSCWAFSTIGAVEGINQIVT 171

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
           G  I+LSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DT++ YPY G DG C    
Sbjct: 172 GDLITLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIR 230

Query: 199 ENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTP 256
           +N  V  +DS  ++   +E+ L+ AV   +PVSVA E     F+ Y SG++  T CG   
Sbjct: 231 KNAKVVTIDSYEDVPTYSEESLKKAVAH-QPVSVAIEAGGRAFQLYDSGIFDGT-CGTQ- 287

Query: 257 MDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
             ++H VVAVGYG E+G  YW+++NSWG++WG+ GY KM          CGIA   SYP+
Sbjct: 288 --LDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLKMARNIASSSGKCGIAIEPSYPI 345


>gi|395535911|ref|XP_003769964.1| PREDICTED: cathepsin K [Sarcophilus harrisii]
          Length = 332

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 122 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSK--NDG 179

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G+E  L+
Sbjct: 180 CGGGYMTNAFQYVQENRGIDSEDAYPYIGQDESCMYNPTGKAAKCRGYREIPEGSEKALK 239

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +  +  F+FY  GVY    C     ++NHAV+AVGYG++ G  +W+I
Sbjct: 240 RAVARVGPVAVAIDASLSSFQFYSKGVYYDENCNGD--NLNHAVLAVGYGIQRGTKHWII 297

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 311
           KNSWGE WG+ GY  M    KN CGIA  AS+P
Sbjct: 298 KNSWGEEWGNKGYILMARNKKNACGIANLASFP 330


>gi|111036376|dbj|BAF02517.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 132/208 (63%), Gaps = 7/208 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG+CGSCW FS+TG+LE A  +  GK ISLSEQQLVDC     N GCNGG  S 
Sbjct: 135 VTEVKNQGNCGSCWAFSSTGALEGALAKKTGKLISLSEQQLVDCTLENGNDGCNGGYMSN 194

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y++ +  ++ E AYPY   DG C++ +E++GV  V D  +I  G E  L  AV  V 
Sbjct: 195 AFKYLEGH-SIEPESAYPYRATDGPCRY-NESLGVGSVTDIGDIPEGNETALMEAVATVG 252

Query: 228 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           P+S+A +    GF FY  G+Y S  C +  +  NH V+A+GYG  DG PYWL+KNSWG  
Sbjct: 253 PISIAIDASTLGFMFYHHGIYKSHWCSSKFL--NHGVLAIGYGKLDGKPYWLVKNSWGSR 310

Query: 287 WGDHGYFKMEMG-KNMCGIATCASYPVV 313
           WG  GY  M     NMCG+A+ A +P V
Sbjct: 311 WGMKGYIMMAKDYHNMCGVASLADFPYV 338


>gi|67678376|gb|AAH96862.1| Cathepsin S, b.2 [Danio rerio]
          Length = 330

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 128/215 (59%), Gaps = 5/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++ VK+QG CGSCW FS+ G+LE    +  GK + LS Q LVDC+  + N G
Sbjct: 119 LDWRDKGYVTSVKNQGACGSCWAFSSVGALEGQLMKTTGKLVDLSPQNLVDCSSKYGNLG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG  SQAF+Y+  NGG+D+E +YPY G  G C++              ++ G E  L+
Sbjct: 179 CNGGYMSQAFQYVIDNGGIDSESSYPYQGTQGSCRYDPSQRAANCTSYKFVSQGDEQALK 238

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            A+  + PVSVA +     F FY+SGVY    C      VNH V+AVGYG   G  YWL+
Sbjct: 239 EALANIGPVSVAIDATRPQFIFYRSGVYDDPSC---TQKVNHGVLAVGYGTLSGQDYWLV 295

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG  +GD GY ++   K NMCGIA+ A YP+V
Sbjct: 296 KNSWGAGFGDGGYIRIARNKNNMCGIASEACYPIV 330


>gi|119573900|gb|EAW53515.1| cathepsin K (pycnodysostosis), isoform CRA_a [Homo sapiens]
          Length = 288

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 78  VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 135

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 136 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 195

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 196 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 253

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 254 KNSWGENWGNKGYILMARNKNNACGIANLASFP 286


>gi|253722774|pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform
          Length = 312

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGS W FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 95  RSVDWREKGYVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPEGN 154

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 155 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKA 213

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    DG
Sbjct: 214 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDG 271

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 272 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 312


>gi|261824899|pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824900|pdb|3H89|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824901|pdb|3H89|C Chain C, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824902|pdb|3H89|D Chain D, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824903|pdb|3H89|E Chain E, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824904|pdb|3H89|F Chain F, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824905|pdb|3H8B|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824906|pdb|3H8B|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824907|pdb|3H8B|C Chain C, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824908|pdb|3H8B|D Chain D, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824909|pdb|3H8B|E Chain E, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824910|pdb|3H8B|F Chain F, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|317455049|pdb|2XU3|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455050|pdb|2XU4|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455051|pdb|2XU5|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009432|pdb|2YJ2|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009433|pdb|2YJ8|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009434|pdb|2YJ9|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009435|pdb|2YJB|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009436|pdb|2YJC|A Chain A, Cathepsin L With A Nitrile Inhibitor
          Length = 220

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 3   RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 63  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKA 121

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 122 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 179

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 180 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|50355619|dbj|BAD29958.1| cysteine protease [Daucus carota]
          Length = 496

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 176/354 (49%), Gaps = 81/354 (22%)

Query: 18  AAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVE 77
           AAA   S  ++D+++ +   + D     E + L           F  +   +GK Y ++ 
Sbjct: 17  AAATDMSIITYDETHAVGFKTDD-----EATTL-----------FESWLVTHGKSYNALG 60

Query: 78  EMKLRFATFSKNLDLIRSTN-CKGLSYRLGLN---------------------------- 108
           E + RF  F  NL  I   N  +   ++LGLN                            
Sbjct: 61  EEEKRFQIFKNNLRYIDEQNLVEDRGFKLGLNKFADLTNEEYRSKYTGIKSKDLRKKVSA 120

Query: 109 ------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
                                   ++ VKDQG CGSCW FST  ++E     A GK I+L
Sbjct: 121 KSGRYATLSGESLPESVDWRESGAVATVKDQGSCGSCWAFSTISAVEGINQIATGKLITL 180

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQ 204
           SEQ+LVDC +++N +GCNGGL   AFE+I  NGG+DT+  YPYTG+DG C    +N  V 
Sbjct: 181 SEQELVDCDRSYN-EGCNGGLMDYAFEFIINNGGIDTDVDYPYTGRDGKCDQYRKNAKVV 239

Query: 205 VLDSVNITLGAEDELQ-HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHA 262
            +DS    + A DEL        +P+SVA E     F+FY SG+++  KCG   + ++H 
Sbjct: 240 TIDSYE-DVPAYDELALKKAAANQPISVAIEASGRDFQFYDSGIFTG-KCG---IALDHG 294

Query: 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           VV VGYG E+G  YW+++NSWG +WG++GY +ME G      +CGIA   SYPV
Sbjct: 295 VVVVGYGTENGKDYWIVRNSWGADWGENGYLRMERGISSKTGICGIAIEPSYPV 348


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 138/219 (63%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +RL   + P+KDQG+CGSCW FST  ++E   +   G+ +SLSEQ+LVDC + ++ +G
Sbjct: 129 VDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCDREYD-EG 187

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AF++I  NGG+DTEE YPY G DG C  + +   V  +D   ++    E+ L
Sbjct: 188 CNGGLMDYAFQFIIQNGGIDTEEDYPYQGIDGTCDETKKKTKVVQIDGYEDVPSNNENAL 247

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVSVA E      + Y+SGV++  KCG     ++H VV VGYG E+GV YWL
Sbjct: 248 KKAVSH-QPVSVAIEASGRALQLYQSGVFTG-KCGTA---LDHGVVVVGYGTENGVDYWL 302

Query: 279 IKNSWGENWGDHGYFKME-----MGKNMCGIATCASYPV 312
           ++NSWG  WG+ GYFKME       +  CGIA   SYPV
Sbjct: 303 VRNSWGTGWGEDGYFKMERNVRSTSEGKCGIAMDCSYPV 341


>gi|47522698|ref|NP_999057.1| cathepsin L1 precursor [Sus scrofa]
 gi|2499874|sp|Q28944.1|CATL1_PIG RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|1468964|dbj|BAA07140.1| porcine cathepsin L [Sus scrofa]
 gi|15027272|emb|CAC44793.1| cathepsin L [Sus scrofa]
          Length = 334

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/222 (46%), Positives = 135/222 (60%), Gaps = 10/222 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++ VK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   N
Sbjct: 116 KSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAED 217
           QGCNGGL   AF+Y+K NGGLDTEE+YPY G++   C +  E         V+I    E 
Sbjct: 176 QGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQ-REK 234

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----D 272
            L  AV  V P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E    +
Sbjct: 235 ALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGTDSN 292

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
              +W++KNSWG  WG +GY KM   + N CGI+T ASYP V
Sbjct: 293 SSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334


>gi|149510440|ref|XP_001518002.1| PREDICTED: cathepsin K-like [Ornithorhynchus anatinus]
          Length = 618

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  G+ + LS Q LVDC  +  N G
Sbjct: 408 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGRLLDLSPQNLVDCVAS--NDG 465

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y+  N G+D+E+AYPY G+D  C++S      +      + +G E  L+
Sbjct: 466 CGGGYMTNAFQYVHDNRGIDSEDAYPYVGQDEPCRYSPTGKAAKCRGYREVPVGDEKALK 525

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +  +  F+FY  GVY    C     ++NHA++AVGYG + G  +W+I
Sbjct: 526 RAVARVGPVAVAIDASLSSFQFYSKGVYFDENCNGA--NLNHALLAVGYGAQKGAKHWII 583

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE WG+ GY  M   K N CGIA+ AS+P
Sbjct: 584 KNSWGEEWGNKGYVLMARNKNNACGIASLASFP 616


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 138/219 (63%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +RL   + P+KDQG+CGSCW FST  ++E   +   G+ +SLSEQ+LVDC + ++ +G
Sbjct: 129 VDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCDREYD-EG 187

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AF++I  NGG+DTEE YPY G DG C  + +   V  +D   ++    E+ L
Sbjct: 188 CNGGLMDYAFQFIIQNGGIDTEEDYPYQGIDGTCDQTKKKTKVVQIDGYEDVPSNNENAL 247

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVSVA E      + Y+SGV++  KCG     ++H VV VGYG E+GV YWL
Sbjct: 248 KKAVSH-QPVSVAIEASGRALQLYQSGVFTG-KCGTA---LDHGVVVVGYGTENGVDYWL 302

Query: 279 IKNSWGENWGDHGYFKME-----MGKNMCGIATCASYPV 312
           ++NSWG  WG+ GYFKME       +  CGIA   SYPV
Sbjct: 303 VRNSWGTGWGEDGYFKMERNVRSTSEGKCGIAMDCSYPV 341


>gi|75765285|pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abe854
 gi|75765286|pdb|1U9W|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abi491
 gi|75765287|pdb|1U9X|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abj688
 gi|160286063|pdb|2R6N|A Chain A, Crystal Structure Of A Pyrrolopyrimidine Inhibitor In
           Complex With Human Cathepsin K
          Length = 217

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 7   VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 64

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 65  CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 124

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 125 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 182

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 183 KNSWGENWGNKGYILMARNKNNACGIANLASFP 215


>gi|241913450|pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913451|pdb|3HHA|B Chain B, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913452|pdb|3HHA|C Chain C, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913453|pdb|3HHA|D Chain D, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|317455045|pdb|2XU1|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455046|pdb|2XU1|B Chain B, Cathepsin L With A Nitrile Inhibitor
 gi|317455047|pdb|2XU1|C Chain C, Cathepsin L With A Nitrile Inhibitor
 gi|317455048|pdb|2XU1|D Chain D, Cathepsin L With A Nitrile Inhibitor
          Length = 220

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 3   RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 63  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKA 121

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 122 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 179

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 180 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|93279455|pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor
          Length = 215

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 5   IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 62

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 63  CGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALK 122

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 123 RAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSD--NLNHAVLAVGYGIQKGNKHWII 180

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  M   K N CGIA  AS+P
Sbjct: 181 KNSWGESWGNKGYILMARNKNNACGIANLASFP 213


>gi|449681105|ref|XP_002158608.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 339

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/260 (40%), Positives = 145/260 (55%), Gaps = 12/260 (4%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGLSYRLGLNISPVKDQG 116
           +S   F + YG  +      KL     +K    +  +N      + +R    ++ VK+QG
Sbjct: 86  MSHEEFRKMYGGCF------KLSKKNVTKGSIFLSPSNVVIPDSVDWRTEGYVTRVKNQG 139

Query: 117 HCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYN 176
            CGSCW FS+TG+LE    +  G    +SEQ LVDC Q++ N+ CNGG    AF YIK N
Sbjct: 140 QCGSCWAFSSTGALEGQTFRKTGVLQEISEQNLVDCTQSYGNEACNGGWMDNAFTYIKDN 199

Query: 177 GGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV 235
            G+D+E  YPY  +  G C ++ +         V+I  G E+ L+ AV  V P+SVA + 
Sbjct: 200 KGIDSEVGYPYYARALGYCYYNQQYNVASDTGFVDIPSGDENALKVAVATVGPISVAIDA 259

Query: 236 VDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK 294
               F  Y+SGVY+   CGN   +++HAV+ VGYG E+G  +W++KNSW   WGD GY K
Sbjct: 260 TKASFMSYQSGVYNEPTCGNGIENLDHAVLVVGYGTEEGRDFWIVKNSWDTTWGDQGYIK 319

Query: 295 MEMG-KNMCGIATCASYPVV 313
           M     N CGIAT ASYP+V
Sbjct: 320 MSRNMSNQCGIATKASYPIV 339


>gi|432108215|gb|ELK33129.1| Cathepsin L1 [Myotis davidii]
          Length = 334

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 130/212 (61%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TGSLE    +  GK +SLSEQ LVDC++A  N+GCNGGL   
Sbjct: 126 VTPVKNQGQCGSCWAFSATGSLEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y+K N GLDTEE+YPY  ++   C +  E         V+I    E  L  AV  V 
Sbjct: 186 AFQYVKDNKGLDTEESYPYLARESNTCNYRPEYSAANDTGFVDIPQ-REKALLKAVATVG 244

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV----PYWLIKNS 282
           P+SVA +     F+FY +G+Y    C  +  D++H V+ VGYG E G      +W++KNS
Sbjct: 245 PISVAIDAGHSSFQFYNAGIYYEPNC--SSKDLDHGVLVVGYGSEGGESKNNKFWIVKNS 302

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 303 WGSGWGMNGYVKMARDQSNHCGIATAASYPTV 334


>gi|28932704|gb|AAO60046.1| midgut cysteine proteinase 3 [Rhipicephalus appendiculatus]
          Length = 334

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 131/217 (60%), Gaps = 5/217 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FSTTGSLE  + +   K +SLSEQ LVDC Q   N
Sbjct: 121 KTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKMRKLVSLSEQNLVDCMQKLGN 180

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GGL   AF+YIK N G+DTE +YPY   DGVC F    VG       +I    E+ 
Sbjct: 181 NGCGGGLMDNAFKYIKANKGIDTELSYPYNATDGVCHFKKSGVGATATGFEDIPARDENS 240

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
              AV  V PVSVA +   + F+FY  GV    +C +  +D  H V+ VGYG +DG  YW
Sbjct: 241 WD-AVAPVGPVSVAIDASHESFQFYSEGVLDEPECSSDQLD--HGVLVVGYGTKDGQDYW 297

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG  WGD GY  M   K N CGIA+ ASYP+V
Sbjct: 298 LVKNSWGTTWGDEGYIYMTRNKDNQCGIASSASYPLV 334


>gi|2914594|pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent
           Vinyl Sulfone Inhibitor
 gi|28374044|pdb|1NL6|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374045|pdb|1NL6|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374047|pdb|1NLJ|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374048|pdb|1NLJ|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|47168617|pdb|1Q6K|A Chain A, Cathepsin K Complexed With T-butyl(1s)-1-cyclohexyl-2-
           Oxoethylcarbamate
 gi|55670045|pdb|1TU6|A Chain A, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|55670046|pdb|1TU6|B Chain B, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|62738654|pdb|1YK7|A Chain A, Cathepsin K Complexed With A Cyanopyrrolidine Inhibitor
 gi|73535690|pdb|1YK8|A Chain A, Cathepsin K Complexed With A Cyanamide-Based Inhibitor
 gi|73535721|pdb|1YT7|A Chain A, Cathepsin K Complexed With A Constrained Ketoamide
           Inhibitor
 gi|93278849|pdb|2BDL|A Chain A, Cathepsin K Complexed With A Pyrrolidine Ketoamide-Based
           Inhibitor
 gi|114793438|pdb|2ATO|A Chain A, Crystal Structure Of Human Cathepsin K In Complex With
           Myocrisin
 gi|114793448|pdb|2AUX|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|114793451|pdb|2AUZ|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|126030469|pdb|2FTD|A Chain A, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|126030470|pdb|2FTD|B Chain B, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|157830076|pdb|1ATK|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor E-64
 gi|157830085|pdb|1AU0|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Symmetric Diacylaminomethyl
           Ketone Inhibitor
 gi|157830086|pdb|1AU2|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Propanone Inhibitor
 gi|157830087|pdb|1AU3|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830088|pdb|1AU4|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830146|pdb|1AYU|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Symmetric Biscarbohydrazide
           Inhibitor
 gi|157830147|pdb|1AYV|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Thiazolhydrazide Inhibitor
 gi|157830148|pdb|1AYW|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent
           Benzyloxybenzoylcarbohydrazide Inhibitor
 gi|157830300|pdb|1BGO|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Peptidomimetic Inhibitor
 gi|197305045|pdb|3C9E|A Chain A, Crystal Structure Of The Cathepsin K : Chondroitin Sulfate
           Complex.
 gi|290560385|pdb|3KW9|A Chain A, X-Ray Structure Of Cathepsin K Covalently Bound To A
           Triazine Ligand
 gi|290560386|pdb|3KWZ|A Chain A, Cathepsin K In Complex With A Non-Selective 2-Cyano-
           Pyrimidine Inhibitor
 gi|290560387|pdb|3KX1|A Chain A, Cathepsin K In Complex With A Selective 2-Cyano-Pyrimidine
           Inhibitor
 gi|293651910|pdb|3KWB|X Chain X, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|293651911|pdb|3KWB|Y Chain Y, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|308198615|pdb|3O1G|A Chain A, Cathepsin K Covalently Bound To A 2-Cyano Pyrimidine
           Inhibitor With A Benzyl P3 Group.
 gi|327200584|pdb|3O0U|A Chain A, Cathepsin K Covalently Bound To A Cyano-Pyrimidine
           Inhibitor With Improved Selectivity Over Herg
 gi|394986262|pdb|4DMX|A Chain A, Cathepsin K Inhibitor
 gi|394986263|pdb|4DMY|A Chain A, Cathepsin K Inhibitor
 gi|394986264|pdb|4DMY|B Chain B, Cathepsin K Inhibitor
          Length = 215

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 5   VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 62

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 63  CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 122

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 123 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 180

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 181 KNSWGENWGNKGYILMARNKNNACGIANLASFP 213


>gi|315364648|pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A
           Ketoamide Warhead
          Length = 213

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 3   VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 60

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 61  CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 120

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 121 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 178

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 179 KNSWGENWGNKGYILMARNKNNACGIANLASFP 211


>gi|50513589|pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized
           Norleucine Aldehyde
          Length = 214

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 4   VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 61

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 62  CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 121

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+I
Sbjct: 122 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWII 179

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct: 180 KNSWGENWGNKGYILMARNKNNACGIANLASFP 212


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 IDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVS--ENYG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ NGG+D+E+AYPY G+D  C +++     +      I +G E  L+
Sbjct: 177 CGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  YW+I
Sbjct: 237 RAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct: 295 KNSWGESWGNKGYVLLARNKNNACGITNLASFP 327


>gi|168058022|ref|XP_001781010.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667567|gb|EDQ54194.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/315 (37%), Positives = 160/315 (50%), Gaps = 67/315 (21%)

Query: 59  ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---------- 108
           A  FA +A ++GK+Y + EE   RF  +  NL+ I+  + K LSY LGL           
Sbjct: 42  AGQFAAWAHKHGKVYSAAEERAHRFLVWKDNLEYIQRHSEKNLSYWLGLTKFADLTNEEF 101

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      ++ VKDQG CGSCW FS
Sbjct: 102 RRQYTGTRIDRSRRLKKGRNATGSFRYANSEAPKSIDWREKGAVTSVKDQGSCGSCWAFS 161

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
             GS+E       G  ISLS Q+LVDC + +N QGCNGGL   AF+++  NGG+DTE+ Y
Sbjct: 162 AVGSVEGINAIRTGDAISLSVQELVDCDKKYN-QGCNGGLMDYAFDFVIQNGGIDTEKDY 220

Query: 186 PYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYK 243
           PY G DG C  +  N  V  +DS  ++    E+ L+ AV   +PVSVA E     F+ Y 
Sbjct: 221 PYQGYDGRCDVNKMNARVVTIDSYEDVPENDEEALKKAVA-GQPVSVAIEAGGRDFQLYS 279

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM------ 297
            GV++  +CG    D++H V+AVGYG E G+ YW++KNSWGE WG+ GY +M+       
Sbjct: 280 GGVFTG-RCG---TDLDHGVLAVGYGSEKGLDYWIVKNSWGEYWGESGYLRMQRNLKDDN 335

Query: 298 GKNMCGIATCASYPV 312
           G  +CGI    SY V
Sbjct: 336 GYGLCGINIEPSYAV 350


>gi|346574377|gb|AEO36960.1| silicatein-alpha 3 [Baikalospongia fungiformis]
          Length = 324

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 148/246 (60%), Gaps = 12/246 (4%)

Query: 78  EMKLRFATF--SKNLDLIRSTNCKGLSYRLGLN------ISPVKDQGHCGSCWTFSTTGS 129
           E   RF T   S+   L    + KG++Y   L+      ++ V+ QG CGS + F+  G+
Sbjct: 81  EFTERFLTHKHSQRSGLQTFESPKGVTYADSLDWRTRGVVTSVQSQGQCGSSYAFAAAGA 140

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           LE A   A  K ++LSEQ ++DC+  + N GC+GG    AF+Y+  NGG+DTE +YPY G
Sbjct: 141 LEGATALAADKLVALSEQNIIDCSVPYGNHGCSGGDVYTAFKYVVDNGGIDTESSYPYKG 200

Query: 190 KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYS 248
           K   C+++S+NVG      V I  G+E +L  AV  V P++VA +  V+ F FY+SGV+ 
Sbjct: 201 KQSSCQYNSKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFD 260

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATC 307
           S+ C  + +  NHA++  GYG  +G  YWL+KNSWG  WG+ GY KM   K N CGIA+ 
Sbjct: 261 SSTCSTSKL--NHAMLVTGYGSTNGKDYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASD 318

Query: 308 ASYPVV 313
           A YP++
Sbjct: 319 ALYPML 324


>gi|330805275|ref|XP_003290610.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
 gi|325079249|gb|EGC32858.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
          Length = 334

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/262 (40%), Positives = 147/262 (56%), Gaps = 11/262 (4%)

Query: 60  LSFARFA----RRYGKIYESVE-EMKLRFATFSKN-LDLIRSTNCKGLSYRLGLNISPVK 113
           L   RFA      Y K Y  +   + LR      N L+  R T    + +R    ++ VK
Sbjct: 76  LGLNRFADLTNEEYKKTYLGMSINVNLRANQVPMNGLNFERFTGPSSIDWRQNGAVAYVK 135

Query: 114 DQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 173
           DQGHCGSCW F+TTG++E A+    G  ++ SEQ LVDC+  + N GC+GGL + AF+YI
Sbjct: 136 DQGHCGSCWAFATTGAVEGAHQIKTGNMVTFSEQHLVDCSGRYGNNGCDGGLMTSAFKYI 195

Query: 174 KYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233
             N G+ TEEAYPYT     C +++  +G  +    ++  G+E  L  A+   +PV+VA 
Sbjct: 196 IDNDGIATEEAYPYTATQNRCVYNTTMLGTAISGYKDVPRGSESALTAAIS-KQPVAVAI 254

Query: 234 EVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGY 292
           +     F+ YKSGVY    C  +   +NH V+AVGYG  +G  Y+++KNSW E WG+ GY
Sbjct: 255 DASPITFQLYKSGVYQEATC--SSYRLNHGVLAVGYGTLEGKDYYIVKNSWAETWGNQGY 312

Query: 293 FKM-EMGKNMCGIATCASYPVV 313
             M     N CGIAT ASY  V
Sbjct: 313 ILMARNANNHCGIATMASYASV 334


>gi|195123219|ref|XP_002006105.1| GI20850 [Drosophila mojavensis]
 gi|193911173|gb|EDW10040.1| GI20850 [Drosophila mojavensis]
          Length = 329

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 132/208 (63%), Gaps = 7/208 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ-AFNNQGCNGGLPS 167
           ++PVK+QG CG+CW+F+ TG+LE  +    GK +SLSEQ LVDC+   + N+GCNGG+P 
Sbjct: 126 VTPVKNQGKCGACWSFAATGTLEGMHFLKTGKLVSLSEQNLVDCSTIRYFNRGCNGGMPF 185

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           +A +Y++ NGG+DTE +Y Y  K   C++   ++G QV D V +  G E  L  AV    
Sbjct: 186 RALKYVRDNGGIDTEYSYTYEAKQLSCRYDPLHIGAQVTDVVRVAAG-EPHLAVAVASKG 244

Query: 228 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGEN 286
           P+SV     + FR Y+ GV +  +C       NHAV+ VG+G +  G  +WL+KNSWG +
Sbjct: 245 PISVGIHASNNFRNYRDGVLNDRQCNKA---ANHAVLVVGFGRDPQGGDFWLVKNSWGAS 301

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WGD GY +M   + N CGIA+ A YP+V
Sbjct: 302 WGDGGYIRMSRNRSNQCGIASNAVYPLV 329


>gi|312386083|gb|ADQ74586.1| silicatein alpha 3 [Lubomirskia baicalensis]
          Length = 330

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/220 (43%), Positives = 137/220 (62%), Gaps = 4/220 (1%)

Query: 96  TNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA 155
           T    L +R    ++ V+ QG CGS + F+  G+LE A   A  K ++LSEQ ++DC+  
Sbjct: 113 TYADSLDWRTRGVVTSVQSQGQCGSSYAFAAAGALEGATALAADKLVALSEQNIIDCSVP 172

Query: 156 FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGA 215
           + N GC+GG    AF+Y+  NGG+DTE +YPY GK   C+++S+NVG      V I  G+
Sbjct: 173 YGNHGCSGGDVYTAFKYVVDNGGIDTESSYPYKGKKSSCQYNSKNVGAISTGVVKIASGS 232

Query: 216 EDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV 274
           E +L  AV  V P++VA +  V+ F FY+SGV+ S+ C  + +  NHA++  GYG  +G 
Sbjct: 233 ETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCSTSKL--NHAMLVTGYGSTNGK 290

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YWL+KNSWG  WG+ GY KM   K N CGIA+ A YP++
Sbjct: 291 DYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 330


>gi|302142276|emb|CBI19479.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/272 (40%), Positives = 150/272 (55%), Gaps = 33/272 (12%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           ++GK Y ++ E + RF  F  NL  I   N +  +Y++                      
Sbjct: 10  KHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKISDRYAFRVGDSLPESVDWRKKG 69

Query: 109 -ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPS 167
            +  VKDQG CGSCW FST  ++E       G  ISLSEQ+LVDC  ++N +GCNGGL  
Sbjct: 70  AVVEVKDQGSCGSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYN-EGCNGGLMD 128

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLV 226
            AFE+I  NGG+D+EE YPY   DG C    +N  V  +D   ++    E  L+ AV   
Sbjct: 129 YAFEFIINNGGIDSEEDYPYKASDGRCDQYRKNAKVVTIDGYEDVPENDEKSLEKAVA-N 187

Query: 227 RPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
           +PVSVA E     F+ Y+SG+++  +CG     ++H V AVGYG E+GV YW++KNSWG 
Sbjct: 188 QPVSVAIEAGGREFQLYQSGIFTG-RCGTA---LDHGVTAVGYGTENGVDYWIVKNSWGA 243

Query: 286 NWGDHGYFKMEM-----GKNMCGIATCASYPV 312
           +WG+ GY +ME          CGIA  ASYP+
Sbjct: 244 SWGEEGYIRMERDLATSATGKCGIAMEASYPI 275


>gi|1809288|gb|AAC47721.1| secreted cathepsin L 2 [Fasciola hepatica]
          Length = 326

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 143/257 (55%), Gaps = 10/257 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKN-LDLIRSTNCKGLSYRLGLNISPVKDQGHC 118
           L+F  F  +Y        E+  R   F  N L +  S + +   Y     ++ VK+QG C
Sbjct: 75  LTFEEFKAKYLIEIPRSSELLSRGIPFKANKLAVPESIDWRDYYY-----VTEVKNQGQC 129

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FSTTG++E  + +      S SEQQLVDC +   N GC GG    A+EY+K+N G
Sbjct: 130 GSCWAFSTTGAVEGQFRKNERASASFSEQQLVDCPRDLGNYGCGGGYMENAYEYLKHN-G 188

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG 238
           L+TE  YPY   +G C++       +V     +  G E EL++ VG   P +VA +    
Sbjct: 189 LETESYYPYQAVEGPCQYDGRLAYAKVTGYYTVHSGDEIELKNLVGTEGPAAVALDADSD 248

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y+SG+Y S  C   P  + HAV+AVGYG +DG  YW++KNSWG  WG+ GY +    
Sbjct: 249 FMMYQSGIYQSQTC--LPDRLTHAVLAVGYGSQDGTDYWIVKNSWGTWWGEDGYIRFARN 306

Query: 299 K-NMCGIATCASYPVVA 314
           + NMCGIA+ AS P+VA
Sbjct: 307 RGNMCGIASLASVPMVA 323


>gi|308321226|gb|ADO27765.1| cathepsin S [Ictalurus furcatus]
          Length = 329

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 127/207 (61%), Gaps = 5/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS  G+LE    +  G+  SLS Q LVDC+  + N+GCNGG  +Q
Sbjct: 126 VTEVKNQGSCGSCWAFSAAGALEGQLKRTTGQVKSLSPQNLVDCSSKYGNKGCNGGFMTQ 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+  +GG+D++EAYPYT  DG C++              ++ G E+ L+ AV  + P
Sbjct: 186 AFQYVIDDGGIDSDEAYPYTAMDGQCRYDQSQRAANCSSYNYVSEGDEEALKQAVATIGP 245

Query: 229 VSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F  Y SGVYS   C     +VNH V+ VGYG  +G  YWL+KNSWG  +
Sbjct: 246 ISVAIDATRPMFILYHSGVYSDPTC---TQNVNHGVLVVGYGSLNGEDYWLVKNSWGTRF 302

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           GD GY ++   K NMCGIA  A YP++
Sbjct: 303 GDGGYIRIARNKGNMCGIANYACYPLM 329


>gi|18308182|gb|AAL67857.1|AF462309_1 cysteine proteinase [Acanthamoeba healyi]
          Length = 330

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/216 (45%), Positives = 136/216 (62%), Gaps = 6/216 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
             +R    ++ VK+QG CGSCW+FSTTGS E A     G+ +SLSEQ L+DC+ ++ N G
Sbjct: 118 FDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKTGRLVSLSEQNLIDCSVSYGNNG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPY-TGKDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL   AFEYI  N G+DTE +YPY T     C++++ N G  +    ++T G E+ L
Sbjct: 178 CNGGLMDYAFEYIINNRGIDTEASYPYQTAGPLTCQYNAANKGGSLTGYTDVTSGDENAL 237

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
            +A  +  PVSVA +   + F+FY  GVY  + C +T +D  H V+ VG+G E+G  +W 
Sbjct: 238 LNAA-VKEPVSVAIDASHNSFQFYSGGVYYESACSSTQLD--HGVLVVGWGSENGQDFWW 294

Query: 279 IKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +KNSWG +WG +GY KM   + N CGIAT ASYP  
Sbjct: 295 VKNSWGASWGLNGYIKMSRNQNNNCGIATAASYPTA 330


>gi|94448668|emb|CAI91572.1| silicatein a3 [Lubomirskia baicalensis]
          Length = 344

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/220 (43%), Positives = 137/220 (62%), Gaps = 4/220 (1%)

Query: 96  TNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA 155
           T    L +R    ++ V+ QG CGS + F+  G+LE A   A  K ++LSEQ ++DC+  
Sbjct: 127 TYADSLDWRTRGVVTSVQSQGQCGSSYAFAAAGALEGATALAADKLVALSEQNIIDCSVP 186

Query: 156 FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGA 215
           + N GC+GG    AF+Y+  NGG+DTE +YPY GK   C+++S+NVG      V I  G+
Sbjct: 187 YGNHGCSGGDVYTAFKYVVDNGGIDTESSYPYKGKKSSCQYNSKNVGAISTGVVKIASGS 246

Query: 216 EDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV 274
           E +L  AV  V P++VA +  V+ F FY+SGV+ S+ C  + +  NHA++  GYG  +G 
Sbjct: 247 ETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCSTSKL--NHAMLVTGYGSTNGK 304

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            YWL+KNSWG  WG+ GY KM   K N CGIA+ A YP++
Sbjct: 305 DYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 344


>gi|225428879|ref|XP_002285299.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 469

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 155/305 (50%), Gaps = 66/305 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           ++GK Y ++ E + RF  F  NL  I   N    +Y++GLN                   
Sbjct: 60  KHGKSYNALGERERRFEIFKDNLRFIEEHNAVNRTYKVGLNRFADLTNEEYRSRYLGRRD 119

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             + PVKDQG+CGSCW FST  ++E   
Sbjct: 120 ETRRGLRASRVSDRYSFRAGEDLPESVDWREKGAVVPVKDQGNCGSCWAFSTIAAVEGIN 179

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
             A G  ISLSEQ+LVDC +++N QGCNGGL   AFE+I  NGG+D+EE YPY   D  C
Sbjct: 180 QIATGDLISLSEQELVDCDKSYN-QGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADTTC 238

Query: 195 KFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKC 252
             + +N  V  +D   ++    E  L+ AV   +PVSVA E     F+ Y+SGV++  +C
Sbjct: 239 DPNRKNARVVSIDGYEDVPQNDERSLKKAVA-NQPVSVAIEAGGRAFQLYQSGVFTG-QC 296

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIATC 307
           G     ++H VVAVGYG E+ V YW+++NSWG NWG+ GY K+E          CGIA  
Sbjct: 297 GTQ---LDHGVVAVGYGTENSVDYWIVRNSWGPNWGESGYIKLERNLAGTETGKCGIAIE 353

Query: 308 ASYPV 312
            SYP+
Sbjct: 354 PSYPI 358


>gi|297802228|ref|XP_002868998.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
 gi|297314834|gb|EFH45257.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/274 (40%), Positives = 154/274 (56%), Gaps = 23/274 (8%)

Query: 56  ARHALSFARFA----RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG------LSYRL 105
           A + L   +F       Y  +Y       +R    +KN++   S    G      + +RL
Sbjct: 94  ATYKLGLTKFTDLTNEEYRSLYLGARTEPVRRIAKAKNVNQKYSAAVDGKEVPETVDWRL 153

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++P+KDQG CGSCW FST  ++E       G+ ISLSEQ+LVDC  ++N QGCNGGL
Sbjct: 154 KGAVNPIKDQGTCGSCWAFSTAAAVEGINKIVTGELISLSEQELVDCDNSYN-QGCNGGL 212

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVG 224
              AF++I  NGGL TE+ YPY G  G C    +N  V  +D   ++    E  L+ A+ 
Sbjct: 213 MDYAFQFIMKNGGLKTEKDYPYRGFGGKCNSFLKNAKVVSIDGYEDVPTKDETALKRAIS 272

Query: 225 LVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
           L +PVSVA E     F+ Y++G+++    GN   +++HAVVAVGYG E+GV YW+++NSW
Sbjct: 273 L-QPVSVAIEAGGRIFQHYQTGIFT----GNCGTNLDHAVVAVGYGSENGVDYWIVRNSW 327

Query: 284 GENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           G  WG+ GY +ME          CGIA  ASYPV
Sbjct: 328 GPRWGEEGYIRMERNLASSKSGKCGIAVEASYPV 361


>gi|157093357|gb|ABV22333.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 161/315 (51%), Gaps = 66/315 (20%)

Query: 58  HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------- 108
           + + F  F  +YGK+Y  + E  +RF  F  N+D+I +TN + L++ LG+N         
Sbjct: 23  YMMMFNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTFALGVNEFTDLTQEE 82

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++PVK+QG CGSCW+FSTT
Sbjct: 83  FAASYTGLKPASLWSGLPRLSTHEYNGAPLASSVDWTTQGVVTPVKNQGQCGSCWSFSTT 142

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G+LE A+  + G  +SLSEQQ  DC     + GCNGG    AF + K N  + TE +YPY
Sbjct: 143 GALEGAWALSTGNLVSLSEQQFEDCDT--TDSGCNGGWMDNAFSFAKKN-SICTEGSYPY 199

Query: 188 TGKDGVCKFSSENVGVQ---VLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYK 243
           T  DG C  S   VG+    V+   +++  +E  +  AV   +PVS+A E     F+ Y 
Sbjct: 200 TATDGTCNLSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQ-QPVSIAIEADQYSFQLYS 258

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCG 303
           SGV +++ CG     ++H V+AVGYG E G  YW +KNSWG +WG+ GY +++ GK   G
Sbjct: 259 SGVLTAS-CGT---RLDHGVLAVGYGSEAGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAG 314

Query: 304 ----IATCASYPVVA 314
               +A   SYPVV+
Sbjct: 315 ECGLLAGPPSYPVVS 329


>gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
          Length = 468

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/311 (37%), Positives = 156/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +G+ Y +V E + R+  F  NL  I + N        S+RLGLN         
Sbjct: 46  YAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDE 105

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ VKDQG CGSCW FST 
Sbjct: 106 YRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAVAEVKDQGSCGSCWAFSTI 165

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N QGCNGGL   AFE+I  NGG+DTE+ YPY
Sbjct: 166 AAVEGINQIVTGDLISLSEQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGIDTEKDYPY 224

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
            G DG C  + +N  V  +DS  ++    E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 225 KGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVA-NQPVSVAIEAAGTAFQLYSSG 283

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++ + CG     ++H V AVGYG E+G  YW++KNSWG +WG+ GY +ME         
Sbjct: 284 IFTGS-CGTA---LDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGK 339

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 340 CGIAVEPSYPL 350


>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis]
 gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 155/315 (49%), Gaps = 67/315 (21%)

Query: 57  RHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRLGLN------- 108
           RH +  A+    YG++Y+   E + RF  F  N++ I S N  G   Y+L +N       
Sbjct: 37  RHEMWMAK----YGRVYKDNSEKERRFEIFRNNVEFIESFNKLGNRPYKLDINEFADLTN 92

Query: 109 -------------------------------------------ISPVKDQGHCGSCWTFS 125
                                                      ++P+KDQG CG CW FS
Sbjct: 93  EEFKVSKNGYKRSSGVGLTEKSSFRYANVTAVPTSMDWRQNGAVTPIKDQGQCGCCWAFS 152

Query: 126 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY 185
              ++E     + GK ISLSEQ+LVDC  +  +QGC GGL   AFE+IK NGGL TE  Y
Sbjct: 153 AVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQGCEGGLMDDAFEFIKQNGGLTTEANY 212

Query: 186 PYTGKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYK 243
           PY G DG C  +   N   ++    ++   +ED L  AV   +PVSVA +     F+FY 
Sbjct: 213 PYQGTDGTCNTNKAGNDAAKITGYEDVPANSEDALLKAVA-SQPVSVAIDASGSAFQFYS 271

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG---- 298
            GV++    G+   +++H V AVGYG  +DG  YWL+KNSWG +WG+ GY +ME      
Sbjct: 272 GGVFT----GDCGTELDHGVTAVGYGTSDDGTKYWLVKNSWGTSWGEDGYIRMERDIEAK 327

Query: 299 KNMCGIATCASYPVV 313
           + +CGIA   SYP  
Sbjct: 328 EGLCGIAMQPSYPTA 342


>gi|242068363|ref|XP_002449458.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
 gi|241935301|gb|EES08446.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
          Length = 350

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/324 (36%), Positives = 159/324 (49%), Gaps = 60/324 (18%)

Query: 43  RDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLI-RSTNCKGL 101
           RD  TS     G+    +   ++   +G+ Y+   E   RF  F  N D + RS    G 
Sbjct: 31  RDLSTST-GGYGEEAMKVRHQQWMAEHGRTYKDEAEKARRFQVFKANADFVDRSNAAGGK 89

Query: 102 SYRLGLN----------------------------------------------------I 109
           SY L +N                                                    +
Sbjct: 90  SYELAINEFADMTNDEFVAMYTGLKPVPAGPKKMAGFKYENLTLSDVDQQAVDWRQKGAV 149

Query: 110 SPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQA 169
           + +K+QG CG CW F+   ++E+ +    G  +SLSEQQ++DC    NN GCNGG    A
Sbjct: 150 TGIKNQGQCGCCWAFAAVAAVESIHQITTGNLVSLSEQQVLDCDTDGNN-GCNGGYIDNA 208

Query: 170 FEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPV 229
           F+YI  NGGL TE+AYPY    G C+ SS    V +    ++  G E  L  AV   +PV
Sbjct: 209 FQYIISNGGLATEDAYPYAAAQGTCQ-SSVQPAVTISSYQDVPSGDEAALAAAV-ANQPV 266

Query: 230 SVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWG 288
           +VA +  + F+FY SGV ++  CG TP  +NHAV AVGY   EDG PYWL+KN WG+NWG
Sbjct: 267 AVAIDAHNNFQFYSSGVLTADTCG-TP-SLNHAVTAVGYSTAEDGTPYWLLKNQWGQNWG 324

Query: 289 DHGYFKMEMGKNMCGIATCASYPV 312
           + GY ++E G N CG+A  ASYPV
Sbjct: 325 EGGYLRVERGTNACGVAQQASYPV 348


>gi|226495425|ref|NP_001148706.1| cysteine protease 1 precursor [Zea mays]
 gi|195621544|gb|ACG32602.1| cysteine protease 1 precursor [Zea mays]
          Length = 463

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/311 (37%), Positives = 156/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +G+ Y +V E + R+  F  NL  I + N        S+RLGLN         
Sbjct: 41  YAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDE 100

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ VKDQG CGSCW FST 
Sbjct: 101 YRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAVAEVKDQGSCGSCWAFSTI 160

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N QGCNGGL   AFE+I  NGG+DTE+ YPY
Sbjct: 161 AAVEGINQIVTGDLISLSEQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGIDTEKDYPY 219

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
            G DG C  + +N  V  +DS  ++    E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 220 KGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVA-NQPVSVAIEAAGTAFQLYSSG 278

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++ + CG     ++H V AVGYG E+G  YW++KNSWG +WG+ GY +ME         
Sbjct: 279 IFTGS-CGTA---LDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGK 334

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 335 CGIAVEPSYPL 345


>gi|344271616|ref|XP_003407633.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++   N+GCNGGL   
Sbjct: 126 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRREGNEGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y++ NGGLD+EE+YPY   D   C +  E         V+I    E  L  AV  V 
Sbjct: 186 AFQYVQDNGGLDSEESYPYLATDTHTCNYKPECSAANDTGFVDIPQ-REKALMKAVATVG 244

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNS 282
           P+SVA +   + F+FYKSG+Y    C  +  D++H V+ VGYG E    +   +W++KNS
Sbjct: 245 PISVAIDAGHESFQFYKSGIYYEPGC--SSKDLDHGVLLVGYGFEGKDSENNKFWIVKNS 302

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG +WG +GY KM   + N CGIAT ASYP V
Sbjct: 303 WGTSWGTNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|208972988|dbj|BAG74343.1| silicatein-M2 [Ephydatia fluviatilis]
          Length = 326

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 4/218 (1%)

Query: 98  CKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN 157
            + + +R    ++ VK QG CG+ + F+ TG+LE A   A  K ++LSEQ ++DC+  + 
Sbjct: 111 AESIDWRTKGAVTSVKYQGQCGASYAFAATGALEGASALANDKQVTLSEQNIIDCSVPYG 170

Query: 158 NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAED 217
           N GC+GG    AF+Y+  NGG+DTE +Y + GK   C+++++  G      V+I  G+E+
Sbjct: 171 NHGCSGGDTYTAFKYVIDNGGIDTESSYSFKGKQSSCQYNNKTSGASATGVVSIAYGSEN 230

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           +L  AV  V PV+VA +   + FRFY+SGV+ S+ C +T +  NHA++  GYG  +G  Y
Sbjct: 231 DLLAAVATVGPVAVAIDANTNAFRFYQSGVFDSSSCSSTKL--NHAMLVTGYGSYNGKDY 288

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSW +NWGD GY  M   K N CGIA+ A YP++
Sbjct: 289 WLVKNSWSKNWGDSGYILMVRNKYNQCGIASDALYPML 326


>gi|75060921|sp|Q5E998.1|CATL2_BOVIN RecName: Full=Cathepsin L2; Flags: Precursor
 gi|59858409|gb|AAX09039.1| cathepsin L2 preproprotein [Bos taurus]
          Length = 334

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 130/212 (61%), Gaps = 10/212 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   
Sbjct: 126 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDN 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK NG LD+EE+YPY   D   C +  E         V+I    E  L  AV  V 
Sbjct: 186 AFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVG 244

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNS 282
           P+SVA +     F+FYKSG+Y    C  +  D++H V+ VGYG E    +   +W++KNS
Sbjct: 245 PISVAIDAGHTSFQFYKSGIYYDPDC--SSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNS 302

Query: 283 WGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WG  WG +GY KM   + N CGIAT ASYP V
Sbjct: 303 WGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/247 (41%), Positives = 147/247 (59%), Gaps = 13/247 (5%)

Query: 74  ESVEEMK-LRFAT-FSKNLDLIRSTNCKG-----LSYRLGLNISPVKDQGHCGSCWTFST 126
           E V++M  L+  T +S++ D +   + +G     + YR    ++PVK+QG CGSCW FS+
Sbjct: 85  EVVQKMTGLKVPTSYSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSS 144

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
            G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYP
Sbjct: 145 VGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYP 202

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
           Y G++  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY  G
Sbjct: 203 YVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKG 262

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGI 304
           VY    C +   ++NHAV+AVGYG+  G  +W+IKNSWGENWG+ GY  M   K N CGI
Sbjct: 263 VYYDESCNSD--NLNHAVLAVGYGILKGNKHWIIKNSWGENWGNKGYILMARNKNNACGI 320

Query: 305 ATCASYP 311
           A  AS+P
Sbjct: 321 ANLASFP 327


>gi|444519959|gb|ELV12909.1| Cathepsin L1 [Tupaia chinensis]
          Length = 333

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/309 (37%), Positives = 157/309 (50%), Gaps = 61/309 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------- 108
           + ++   +GK+Y + EE  LR A + KNL +I   N +      ++ +G+N         
Sbjct: 29  WNQWTAEHGKVYSTGEE-SLRRAVWEKNLKMIEQHNLEYSQGKHTFTMGMNAFGDMTNED 87

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVK+Q  CGSCW FS TG+L
Sbjct: 88  FRQMMTGFQNQKYNKGEVFQPPQPLEVPESVDWREKGYVTPVKNQHRCGSCWAFSATGAL 147

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E    +  GK +SLSEQ LVDC+Q  +N GC GGL  +AF+Y+K NGGLD+EE+YPY   
Sbjct: 148 EGQMFRKTGKLVSLSEQNLVDCSQPQHNSGCKGGLVIKAFQYVKDNGGLDSEESYPYEEM 207

Query: 191 DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSS 249
           +  C++S  N    V    +I    E  L+ AV  V P+SVA +     F+FY  G+   
Sbjct: 208 ESTCRYSPGNSAATVTGFKHIP-AEEKALEKAVASVGPISVAIDAHHHSFQFYTGGILHE 266

Query: 250 TKCGNTPMDVNHAVVAVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGI 304
             C  +P  +NHAV+ VGYGV     +   YWL+KNSWGE WG  GY  M   K N CGI
Sbjct: 267 PNC--SPKWLNHAVLVVGYGVMQEGSNNNTYWLVKNSWGERWGVGGYIMMAKDKNNHCGI 324

Query: 305 ATCASYPVV 313
           A+ A YP+V
Sbjct: 325 ASDALYPIV 333


>gi|383860620|ref|XP_003705787.1| PREDICTED: counting factor associated protein D-like [Megachile
           rotundata]
          Length = 549

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 135/229 (58%), Gaps = 2/229 (0%)

Query: 84  ATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 143
           A F  N D         L +RL   ++PVKDQ  CGSCW+F TTG++E AY+  +GK + 
Sbjct: 318 APFPYNADEEVKKVPDSLDWRLYGAVTPVKDQSVCGSCWSFGTTGAVEGAYYMKYGKLVR 377

Query: 144 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVG 202
           LS+Q L+DC+  F N GC+GG   +++++I  +GGL  E+ Y  Y G+DG C  ++    
Sbjct: 378 LSQQALIDCSWGFGNNGCDGGEDFRSYQWIMKHGGLPAEDEYGGYLGQDGYCHANNVTKV 437

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNH 261
            ++   VN+T G  + L+ A+    P+SVA +     F FY  GVY    CGNT   ++H
Sbjct: 438 AKITGFVNVTPGDPNALKVAIAKHGPISVAIDAAHKTFSFYSHGVYYDESCGNTEESLDH 497

Query: 262 AVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           AV+AVGYG  +G  YWL+KNSW   WG+ GY  M   KN CG+ T  +Y
Sbjct: 498 AVLAVGYGKLNGKDYWLVKNSWSNYWGNDGYILMSQEKNNCGVLTAPTY 546


>gi|328869030|gb|EGG17408.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 379

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 138/245 (56%), Gaps = 34/245 (13%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    +SP+K+QG CGSCW+FSTTGS+E A++ + GK + LSEQ LVDC+ +  N G
Sbjct: 137 VDWRAKGAVSPIKNQGQCGSCWSFSTTGSVEGAHYISTGKMVPLSEQNLVDCSGSEGNMG 196

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDEL 219
           C GGL + AF+YI  N G+DTE++YPY+ + G  C F+  NVG  +    NIT G E  L
Sbjct: 197 CQGGLMNLAFDYIIKNEGIDTEDSYPYSAETGKKCLFNKTNVGATISSYKNITSGDESNL 256

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED------ 272
             AV    PVSVA +   + F+ Y  G+Y    C +  +D  H V+ VGYG  D      
Sbjct: 257 ADAVKNAGPVSVAIDASHNSFQLYSHGIYYEKDCSSVNLD--HGVLVVGYGSGDPSSLAN 314

Query: 273 ------------------GVP-----YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCA 308
                               P     YW++KNSWG  WG HG+  M M + N CGIAT A
Sbjct: 315 NVGGRSGPKMVVFNNRMVKTPSSNGDYWIVKNSWGSTWGSHGFIFMSMNRDNNCGIATSA 374

Query: 309 SYPVV 313
           SYP+V
Sbjct: 375 SYPIV 379


>gi|344257450|gb|EGW13554.1| Testin-2 [Cricetulus griseus]
          Length = 401

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/221 (45%), Positives = 133/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K +++R    ++PVK QGHC S W FS TG+LE    +   K  +LSEQ L+DC +    
Sbjct: 184 KQVNWREQGYVTPVKSQGHCASSWAFSATGALEGQMFKKTRKLNALSEQNLLDCMEFNVT 243

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           + C+GG    AF+Y++ NGGL TEE+YPY G    C++ ++N    V D V I  G E+ 
Sbjct: 244 RSCSGGFMQSAFQYVRDNGGLATEESYPYQGHAMECRYQAKNSAANVKDFVQIP-GHEEA 302

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +     F+FY+SG+Y   KC    +  NHAV+ VGYG E    DG
Sbjct: 303 LMKAVANVGPISVAIDARHSSFQFYESGIYYEPKCKR--VHQNHAVLVVGYGFEGEESDG 360

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY K+     N CGIAT A+YP+V
Sbjct: 361 NSYWLVKNSWGEEWGIKGYMKIAKDWNNHCGIATHATYPIV 401


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/309 (38%), Positives = 157/309 (50%), Gaps = 65/309 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           FA +A ++GK Y   E+   RFA +  NL  IR +     +Y LGL              
Sbjct: 54  FAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIRHSE-TNRTYSLGLTKFADLTNEEFRRM 112

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++ VKDQG CGSCW FS  GS+E 
Sbjct: 113 YTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKDQGSCGSCWAFSAVGSVEG 172

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
                 G+ +SLSEQ+LVDC   +N QGCNGGL   AF++I  NGG+DTE+ YPY G DG
Sbjct: 173 INAIRNGEAVSLSEQELVDCDLEYN-QGCNGGLMDYAFDFIIQNGGIDTEKDYPYKGFDG 231

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  S +N  V  +D   ++    E+ L+ AV   +PVSVA E     F+ Y  GV+S  
Sbjct: 232 RCDNSKKNAHVVTIDGYEDVPENDEEALKKAVA-GQPVSVAIEAGGRDFQLYAQGVFSG- 289

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-------GKNMCG 303
           +CG    D++H V+AVGYG EDGV YW++KNSWGE WG+ GY +M+        G  +CG
Sbjct: 290 ECGT---DLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGESGYLRMKRNMKDSNDGPGLCG 346

Query: 304 IATCASYPV 312
           I    SY V
Sbjct: 347 INIEPSYAV 355


>gi|340368358|ref|XP_003382719.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 329

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 126/214 (58%), Gaps = 4/214 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CG+CW FS TG+LE  +    G  ISLSEQQL+DC+ +F N G
Sbjct: 115 VDWRKSGAVTGVKNQGKCGACWAFSATGALEGQHFINTGTLISLSEQQLMDCSSSFGNNG 174

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GGL   AF Y++   G  TEEAYPY  + G C+++S    V+     +I  G ED LQ
Sbjct: 175 CKGGLMDNAFRYLETVAGDMTEEAYPYLAEVGTCRYNSSEAKVKNTVYKDIPEGDEDALQ 234

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  + P+SV+       F+ Y  GVY    C ++ +D  H V+ +GYG  D   YWL+
Sbjct: 235 EAVATIGPISVSINSEHSSFQLYDQGVYYEPTCSSSKLD--HGVLVIGYGTSDNNDYWLV 292

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           KNSWG NWG  GY  M   K N CGIAT ASYP 
Sbjct: 293 KNSWGTNWGMDGYIMMSRNKENNCGIATRASYPT 326


>gi|392922428|ref|NP_001256719.1| Protein CPL-1, isoform b [Caenorhabditis elegans]
 gi|379657173|emb|CCG28194.1| Protein CPL-1, isoform b [Caenorhabditis elegans]
          Length = 198

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 93/199 (46%), Positives = 128/199 (64%), Gaps = 5/199 (2%)

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG 177
           CGSCW FS TG+LE  + +  G+ +SLSEQ LVDC+  + N GCNGGL  QAFEYI+ N 
Sbjct: 2   CGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNH 61

Query: 178 GLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           G+DTEE+YPY G+D  C F+ + VG      V+   G E++L+ AV    P+S+A +   
Sbjct: 62  GVDTEESYPYKGRDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGH 121

Query: 238 -GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKM 295
             F+ YK GVY   +C +  +D  H V+ VGYG + +   YW++KNSWG  WG+ GY ++
Sbjct: 122 RSFQLYKKGVYYDEECSSEELD--HGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRI 179

Query: 296 EMGK-NMCGIATCASYPVV 313
              + N CG+AT ASYP+V
Sbjct: 180 ARNRNNHCGVATKASYPLV 198


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 136/221 (61%), Gaps = 13/221 (5%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVKDQG CGSCW FST  ++E     A G  ISLSEQ+LVDC + FN 
Sbjct: 95  QSVDWREKGAVAPVKDQGQCGSCWAFSTVAAVEGINQIATGDLISLSEQELVDCDKGFN- 153

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAED 217
           QGCNGG    AFE+I  NGG+DTE+ YPY G DG C  + +N  V  ++   ++    E 
Sbjct: 154 QGCNGGFMDYAFEFIVKNGGIDTEDDYPYKGVDGQCDQNRKNAKVVTINGFEDVPQNDEK 213

Query: 218 ELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            L+ AV   +PVSVA E     F+ Y+SG+++   CG    D++H VVAVGYG EDG  Y
Sbjct: 214 SLKKAVAH-QPVSVAIEAGGRAFQLYESGIFNGL-CG---TDLDHGVVAVGYGTEDGKDY 268

Query: 277 WLIKNSWGENWGDHGYFKME-----MGKNMCGIATCASYPV 312
           W+++NSWG NWG++GY ++E          CGIA   SYP 
Sbjct: 269 WIVRNSWGPNWGENGYIRLERNVASTNTGKCGIAMQPSYPT 309


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      + +G E  L+
Sbjct: 177 CGGGYMTNAFQYVQQNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREVPVGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C     ++NHAV+AVGYG++ G  +W++
Sbjct: 237 RAVARVGPISVAIDASLTSFQFYSKGVYYDESCDGD--NLNHAVLAVGYGIQRGHKHWIL 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  +   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYVLLARNKNNTCGIANLASFP 327


>gi|410256886|gb|JAA16410.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGGEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|410256882|gb|JAA16408.1| cathepsin L1 [Pan troglodytes]
 gi|410256884|gb|JAA16409.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 116 RSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 176 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKA 234

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWG  WG  GY KM    +N CGIA+ ASYP V
Sbjct: 293 NKYWLVKNSWGGEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|330793420|ref|XP_003284782.1| hypothetical protein DICPUDRAFT_28222 [Dictyostelium purpureum]
 gi|325085276|gb|EGC38686.1| hypothetical protein DICPUDRAFT_28222 [Dictyostelium purpureum]
          Length = 347

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 160/334 (47%), Gaps = 76/334 (22%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           Q   + ++  +F  +  +  + Y S EE   R+  F  N+D ++  N KG    LGLN  
Sbjct: 19  QQFSELQYRNAFTNWMIQNQRHYAS-EEFAARYNIFKANMDYVQEWNSKGSETVLGLNTF 77

Query: 109 ---------------------------------------------ISPVKDQGHCGSCWT 123
                                                        ++P+K+Q  CG CW+
Sbjct: 78  ADITNQEFRSIYLGTPFDGSSIINTETEKIFAAPAASIDWRTKGAVTPIKNQQQCGGCWS 137

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FSTTGS E A   A G   SLSEQ L+DC+ ++ N GCNGGL + AFEYI  N G+DTE 
Sbjct: 138 FSTTGSTEGATAIAKGNLPSLSEQNLIDCSGSYGNNGCNGGLMTLAFEYIINNKGIDTES 197

Query: 184 AYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRF 241
           +YPYT KDG  CK++  N+G  +    N+T G+E  L+ A   + PVSVA +   + F+ 
Sbjct: 198 SYPYTAKDGKTCKYNPANIGATLSSYSNVTSGSEPSLESAAN-IGPVSVAIDASHNSFQL 256

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGY---------------------GVEDGVPYWLIK 280
           Y SG+Y    C  T +D  H V+ VGY                     G   G  YW++K
Sbjct: 257 YSSGIYYEPACSTTSLD--HGVLVVGYASGSGSGSGSGSGSGSGLAVEGASSG-NYWIVK 313

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG +WG  GY  M   + N CGIAT AS+P V
Sbjct: 314 NSWGTSWGIEGYILMSKDRNNNCGIATMASFPKV 347


>gi|410990010|ref|XP_004001243.1| PREDICTED: cathepsin L1 isoform 2 [Felis catus]
          Length = 337

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 135/223 (60%), Gaps = 13/223 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG+C  CW FS TG+LE    +  GK +SLSEQ LVDC+Q   N+G
Sbjct: 118 VDWREKGYVTPVKDQGYCLCCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSQTEGNEG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGK----DGVCKFSSENVGVQVLDSVNITLGAE 216
            +GGL   AF+Y+K NGGLD+EE+YPY  +       CK+  EN    V D  +I    E
Sbjct: 178 YSGGLIDDAFQYVKDNGGLDSEESYPYHAQVKRASYSCKYRPENSVANVTDYWDIP-SKE 236

Query: 217 DELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---- 271
           +EL   +  V P+S A +  +D FRFYK G+Y    C +   DV+H V+ VGYG +    
Sbjct: 237 NELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSE--DVDHGVLVVGYGADGTET 294

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +   YW+IKNSWG +WG  GY KM   + N CGIA+ AS+P V
Sbjct: 295 ENKKYWIIKNSWGTDWGMDGYIKMAKDRDNHCGIASLASFPTV 337


>gi|380013206|ref|XP_003690657.1| PREDICTED: counting factor associated protein D-like [Apis florea]
          Length = 549

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 139/227 (61%), Gaps = 2/227 (0%)

Query: 86  FSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLS 145
           F  N++   ++    L +RL   ++PVKDQ  CGSCW+F TTG++E AY   +GK + LS
Sbjct: 320 FPYNIEQEITSIPDNLDWRLYGAVTPVKDQSVCGSCWSFGTTGAVEGAYFMKYGKLVRLS 379

Query: 146 EQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVGVQ 204
           +Q L+DC+  F N GC+GG   +++++I  +GGL TE+ Y  Y G+DG C  ++ ++  +
Sbjct: 380 QQALIDCSWGFGNNGCDGGEDFRSYQWIMKHGGLPTEDEYGGYLGQDGYCHVNNISMIAK 439

Query: 205 VLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAV 263
           +   VN+T G  + L+ A+    P+SVA +     F FY  G+Y  + CGN    ++HAV
Sbjct: 440 ITGYVNVTSGDANALKIAIAKHGPISVAIDASHKTFSFYSHGIYYESTCGNIEESLDHAV 499

Query: 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           +AVGYG  +G  YWLIKNSW   WG+ GY  M   KN CG+ T  +Y
Sbjct: 500 LAVGYGKINGKDYWLIKNSWSNYWGNDGYILMSQEKNNCGVLTTPTY 546


>gi|118404242|ref|NP_001072435.1| cathepsin K precursor [Xenopus (Silurana) tropicalis]
 gi|113197688|gb|AAI21683.1| hypothetical protein MGC147539 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++P+++QG CGSCW FS+ G+LE    +  GK + LS Q LVDC +   N G
Sbjct: 121 IDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVDLSPQNLVDCVK--KNDG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY++ N G+D+E AYPY G+D  C +++            +  G+E  L+
Sbjct: 179 CGGGYMTNAFEYVRDNKGIDSENAYPYVGEDQECMYNATGKAASCKGFKEVQEGSEKALK 238

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AVGLV PVSV  +  +  F+FY  GVY    C     ++NHAV+AVGYG +    YW++
Sbjct: 239 KAVGLVGPVSVGIDAGLSSFQFYSKGVYYDKDC--NAENINHAVLAVGYGTQKKTKYWIV 296

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWGE+WG+ GY  M   K N CGI++ ASYPV+
Sbjct: 297 KNSWGEDWGNKGYILMAREKDNACGISSLASYPVM 331


>gi|403302732|ref|XP_003942007.1| PREDICTED: cathepsin S isoform 2 [Saimiri boliviensis boliviensis]
          Length = 289

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/255 (40%), Positives = 143/255 (56%), Gaps = 11/255 (4%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNISPVKDQGHCGS 120
           + + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   + D G CG+
Sbjct: 40  WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMN--HLGDMGSCGA 97

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLD 180
           CW FS  G+LEA      GK +SLS Q LVDC++ + N+GCNGG  ++AF+YI  N G+D
Sbjct: 98  CWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGID 157

Query: 181 TEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GF 239
           +E +YPY   D  C++ S+           +  G ED L+ AV    PV V  +     F
Sbjct: 158 SEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSF 217

Query: 240 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK 299
             Y+SGVY    C      VNH V+ +GYG  +G  YWL+KNSWG N+G+ GY +M   K
Sbjct: 218 FLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNK 274

Query: 300 -NMCGIATCASYPVV 313
            N CGIA+  SYP +
Sbjct: 275 GNHCGIASYPSYPEI 289


>gi|66394764|gb|AAY46196.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS+TG+LEA + +  G+ ISLSEQ L+DC++ + N GCNGG+   
Sbjct: 173 VTEVKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDN 232

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK N G+D E  YPY  K G  C F   +VG       +I  G E++L+ AV    
Sbjct: 233 AFQYIKDNNGVDKELDYPYKAKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAVATQG 292

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGE 285
           P SVA +     F+ Y  GVY   +C  +P +++H V+ VGYG +     YW++KNSWG 
Sbjct: 293 PASVAIDAGHRSFQLYTHGVYFEKEC--SPENLDHGVLVVGYGTDAQQGDYWIVKNSWGA 350

Query: 286 NWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           +WG+ GY +M    KN CGIA+ ASYP+V
Sbjct: 351 HWGEQGYIRMARNRKNNCGIASHASYPLV 379


>gi|45384464|ref|NP_990302.1| cathepsin K precursor [Gallus gallus]
 gi|25089842|sp|Q90686.1|CATK_CHICK RecName: Full=Cathepsin K; AltName: Full=JTAP-1; Flags: Precursor
 gi|1017831|gb|AAC59739.1| JTAP-1 [Gallus gallus]
          Length = 334

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 126/213 (59%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVKDQG CGSCW FS+ G+LE    +  GK +SLS Q LV C    NN G
Sbjct: 124 VDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYCVS--NNNG 181

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY++ N G+D+E+AYPY G+D  C +S      +      I    E  L+
Sbjct: 182 CGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALK 241

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  + PVSV  +  +  F+FY  GVY  T C   P ++NHAV+AVGYG + G  +W+I
Sbjct: 242 RAVARIGPVSVGIDASLPSFQFYSRGVYYDTGC--NPENINHAVLAVGYGAQKGTKHWII 299

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 311
           KNSWG  WG+ GY  +    K  CGIA  AS+P
Sbjct: 300 KNSWGTEWGNKGYVLLARNMKQTCGIANLASFP 332


>gi|402585860|gb|EJW79799.1| cysteine protease 6 [Wuchereria bancrofti]
          Length = 242

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 88/205 (42%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG++E+ +    G  ISLSEQ+L+DC    N  GCNGGLP  
Sbjct: 41  VTPVKNQGSCGSCWAFSVTGNIESLWAIKTGNLISLSEQELIDCDVIDN--GCNGGLPIN 98

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF  IK  GGL+ E+ YPY  K+G C      + V + D++ I    E  ++  +    P
Sbjct: 99  AFREIKRMGGLEPEDQYPYKAKNGTCHLVRAQIAVTIDDAIEIPRN-ETVMKAWIAQRGP 157

Query: 229 VSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWG 288
           +SV  +  +   +YKSG+   +K    P  +NH V+  GYG+E+G+PYW IKNSWGE WG
Sbjct: 158 LSVGIDA-ELLAYYKSGILHPSKSRCPPSKINHGVLITGYGIENGLPYWTIKNSWGEEWG 216

Query: 289 DHGYFKMEMGKNMCGIATCASYPVV 313
           ++GYF++  GK++CG++   S  ++
Sbjct: 217 ENGYFRLMRGKDICGVSDLVSSAII 241


>gi|452258|emb|CAA80446.1| cathepsin L-like protease [Fasciola hepatica]
          Length = 326

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 143/257 (55%), Gaps = 10/257 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKN-LDLIRSTNCKGLSYRLGLNISPVKDQGHC 118
           L+F  F  +Y        E+  R   +  N L +  S + +   Y     ++ VKDQG C
Sbjct: 75  LTFEEFKAKYLIEIPRSSELLSRGIPYKANKLAVPESIDWRDYYY-----VTEVKDQGQC 129

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FSTTG++E  + +      S SEQQLVDC + F N GC GG    A+EY+K+N G
Sbjct: 130 GSCWAFSTTGAVEGQFRKNERASASFSEQQLVDCTRDFGNYGCGGGYMENAYEYLKHN-G 188

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG 238
           L+TE  YPY   +G C++       +V     +  G E EL++ VG     +VA +    
Sbjct: 189 LETESYYPYQAVEGPCQYDGRLAYAKVTGYYTVHSGDEIELKNLVGTEDLPAVALDADSD 248

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y+SG+Y S  C   P  + HAV+AVGYG +DG  YW++KNSWG  WG+ GY +    
Sbjct: 249 FMMYQSGIYQSQTC--LPDRLTHAVLAVGYGSQDGTDYWIVKNSWGTWWGEDGYIRFARN 306

Query: 299 K-NMCGIATCASYPVVA 314
           + NMCGIA+ AS P+VA
Sbjct: 307 RGNMCGIASLASVPMVA 323


>gi|297287735|ref|XP_002803218.1| PREDICTED: putative cathepsin L-like protein 6-like [Macaca
           mulatta]
          Length = 270

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW FS TG+LE       GK ISLSEQ LVDC+    N+G NGG    
Sbjct: 63  VTPVKNQGMCGSCWAFSATGALEGQMFWKTGKLISLSEQNLVDCSWPQGNEGYNGGFMDN 122

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           +F Y++ NGGLD+E +YPY GK   C+++ +         V+I    E +L  AV  V P
Sbjct: 123 SFRYVQENGGLDSEASYPYEGKVKTCRYNPKYSVANDTGFVDIP-SREKDLAKAVATVGP 181

Query: 229 VSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW 283
           +SVA +     F+FYK G+Y   +C   P  ++HA++ VGYG E    D   YWL+KNSW
Sbjct: 182 ISVAVDASHFSFQFYKKGIYFEPRC--DPEGLDHAMLTVGYGYEGADSDNNKYWLVKNSW 239

Query: 284 GENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           G+NWG  GY KM    +N CGIAT ASYP V
Sbjct: 240 GKNWGMDGYIKMAKDRRNNCGIATAASYPTV 270


>gi|405976506|gb|EKC41011.1| Counting factor associated protein D [Crassostrea gigas]
          Length = 349

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/286 (38%), Positives = 156/286 (54%), Gaps = 16/286 (5%)

Query: 43  RDFETSVLQVIGQARHALSFARFARRYG-KIYESVEEMK-----------LRFATFSKNL 90
            +F  +V  +  + R AL F+        K  E +  M            L F T   +L
Sbjct: 65  HNFRQNVRFIHSKNRAALGFSLAVNHLADKTQEEIRLMNGYRYSPGPHGGLAFDTSKYSL 124

Query: 91  -DLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQL 149
            DL  S + +   Y     ++PVKDQ  CGSCW+F TTG++E AY    G  + LS+QQL
Sbjct: 125 RDLPDSMDWRLHGYLSQRAVTPVKDQAVCGSCWSFGTTGTIEGAYFLKTGDLVRLSQQQL 184

Query: 150 VDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVGVQVLDS 208
           +DC+    N  C+GG   +A++++  NGGL +EE Y PY  +DG C  +   + VQ+ + 
Sbjct: 185 MDCSWGEGNNACDGGEDFRAYQWMMKNGGLTSEELYGPYKAQDGKCNKTITPI-VQLKNY 243

Query: 209 VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           VN+T G    L+ A+    PVSVA +       FY +GVY   +CGN P D++HAV+AVG
Sbjct: 244 VNVTSGDLQALKFAIAHQGPVSVAIDASHLSLSFYANGVYYEPQCGNKPDDLDHAVLAVG 303

Query: 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           YGV +G  YWLIKNSW   WG+ GY  M    N CG+AT  ++ +V
Sbjct: 304 YGVMNGQAYWLIKNSWSTYWGNDGYVLMSQKDNNCGVATDPTFVIV 349


>gi|348542138|ref|XP_003458543.1| PREDICTED: counting factor associated protein D-like [Oreochromis
           niloticus]
          Length = 551

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 149/304 (49%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F+ F  ++ + Y    E + R   F  NL  I S N  G+S+ L LN             
Sbjct: 248 FSHFKDKFQRQYNDEREHEKREHAFVLNLRYIHSKNRAGMSFSLALNSLSDRTMSELATM 307

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F+TTG++E 
Sbjct: 308 RGRKRGKTPNRGLPFPFKAYERVNLPESLDWRLYGAVTPVKDQAICGSCWSFATTGAVEG 367

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           A     G    LS+Q L+DC+  F N GC+GG   +A+E+I  +GG+ T E Y  Y G +
Sbjct: 368 ALFVKTGSLQVLSQQMLIDCSWGFGNNGCDGGEEWRAYEWIMKHGGIATTETYGAYMGMN 427

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSST 250
           G C   S  +  ++    N+T G +  L+ A+    PV+V+ +     F FY  GVY   
Sbjct: 428 GFCHVDSSELTARIQSYTNVTSGDQLALKMALFKNGPVAVSIDASHRSFVFYSHGVYYEP 487

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            CGNT  D++HAV+AVGYG   G PYWLIKNSW   WG+ GY  M M  N CG+AT A+Y
Sbjct: 488 ACGNTVDDLDHAVLAVGYGTLSGEPYWLIKNSWSTYWGNDGYILMSMKDNNCGVATDATY 547

Query: 311 PVVA 314
             +A
Sbjct: 548 VTLA 551


>gi|358334193|dbj|GAA43174.2| cysteine proteinase 3, partial [Clonorchis sinensis]
          Length = 374

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 6/221 (2%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PV+ QG CG+CW F+ TG++E  Y     +  + S QQLVDC Q    
Sbjct: 154 QSIDWRRNGAVTPVRRQGDCGACWAFAATGAIEGRYFIFEKRLETFSPQQLVDCIQGDTT 213

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG-----KDGVCKFSSENVGVQVLDSVNITL 213
            GCNGG PS+AFEY++  GGL+ E  YPY        +  C +      V++   V +  
Sbjct: 214 NGCNGGYPSEAFEYVENVGGLELERDYPYVSVATGLPNPFCGYDQTKQQVKLTSHVILPS 273

Query: 214 GAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 272
           G E+ L  AV +  P+++ F+     F+ Y+S +YS   CG T  DV HA++ VGYG E 
Sbjct: 274 GDEEALLQAVSIYGPIAILFDASHPSFKDYESDIYSEENCGTTLDDVTHAMLVVGYGEEL 333

Query: 273 GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           G PYWL+KNSWG+ WG+ GY ++  G NMC +A  +SYP++
Sbjct: 334 GEPYWLVKNSWGDKWGEKGYMRVRRGVNMCAVAGFSSYPLM 374


>gi|296168737|emb|CAQ54046.1| silicatein alpha 2 [Ephydatia muelleri]
          Length = 340

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CG+ + F+ TG++E A   +  K ++LSEQ ++DC+ A+ N G
Sbjct: 128 IDWRTKGAVTSVKNQGDCGASYAFAATGTMEGANALSNDKQVALSEQNIIDCSVAYGNHG 187

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG    A +Y+  NGG+DTE +Y + GK   C+++S+N G     +V+I+ G+E +L 
Sbjct: 188 CSGGDTYTAIKYVVDNGGIDTESSYSFRGKQSSCQYNSKNSGASATGAVSISYGSESDLM 247

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +   + FRFY+SGV+ S+ C +T +  NHA++  GYG  +G  YWL+
Sbjct: 248 SAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTKL--NHAMLVTGYGSYNGKDYWLV 305

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG+ WGD GY  M   K N CGIA+ A Y ++
Sbjct: 306 KNSWGKYWGDSGYIMMVRNKYNQCGIASDALYSML 340


>gi|66377984|gb|AAY45869.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS+TG+LEA + +  G+ ISLSEQ L+DC++ + N GCNGG+   
Sbjct: 173 VTEVKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDN 232

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK N G+D E  YPY  K G  C F   +VG       +I  G E++L+ AV    
Sbjct: 233 AFQYIKDNNGVDKELDYPYKAKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAVATQG 292

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGE 285
           P SVA +     F+ Y  GVY   +C  +P +++H V+ VGYG +     YW++KNSWG 
Sbjct: 293 PASVAIDAGHRSFQLYTHGVYFEKEC--SPENLDHGVLVVGYGTDAQQGDYWIVKNSWGA 350

Query: 286 NWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           +WG+ GY +M    KN CGIA+ ASYP+V
Sbjct: 351 HWGEQGYIRMARNRKNNCGIASHASYPLV 379


>gi|94448670|emb|CAI91573.1| silicatein a4 [Lubomirskia baicalensis]
 gi|312386085|gb|ADQ74587.1| silicatein alpha 4 [Lubomirskia baicalensis]
          Length = 326

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK QG CG+ + F+ TG+LE A   +  K + LSEQ ++DC+  + N G
Sbjct: 114 IDWRTKGAVTSVKYQGQCGASYAFAATGALEGASALSNDKQVILSEQNIIDCSVPYGNHG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG    A +Y+  NGG+DTE +Y + GK   C++SS+N G      ++I  G+E +L 
Sbjct: 174 CSGGDTYTAMKYVIDNGGIDTESSYSFQGKQSSCQYSSKNSGASATGVISIASGSETDLF 233

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +   + FRFY+SGV+ S+ C NT +  NHA++  GYG  +G  YWL+
Sbjct: 234 AAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSNTKL--NHAMLVTGYGSYNGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSW +NWGD+GY  M   K N CGIAT A YP +
Sbjct: 292 KNSWSKNWGDNGYIMMVRNKYNQCGIATDALYPTL 326


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/307 (36%), Positives = 152/307 (49%), Gaps = 59/307 (19%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN------- 108
           + F  F  ++GK Y++  E   RFA F +NL  I + N    +G+ SY  G+N       
Sbjct: 24  VHFQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTR 83

Query: 109 ------------------------------------------ISPVKDQGHCGSCWTFST 126
                                                     ++P+KDQ  CGSCW+F+ 
Sbjct: 84  AEFKAMLATQVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWSFAV 143

Query: 127 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYP 186
            GS E AY  + GK    SEQQLVDC    N  GC+GG     F YI+ NG L+ E  YP
Sbjct: 144 VGSTEGAYALSTGKLTRFSEQQLVDCTTDLN-YGCDGGYLDDTFPYIQTNG-LELESDYP 201

Query: 187 YTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGV 246
           YTG DG C + S  V  +V   V++    E  L  AVG   PV++A    D  +FY SG+
Sbjct: 202 YTGYDGSCSYDSSKVVTKVSSYVSVP-ANEQALLEAVGTAGPVAIAINA-DDLQFYFSGI 259

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT 306
                C   P  ++H V+AVGY  E+G+ YWLIKNSWG +WG+ GYF+   G+N+CG+  
Sbjct: 260 IDDKYCD--PEWLDHGVLAVGYNSENGLDYWLIKNSWGADWGESGYFRFLRGQNICGVKE 317

Query: 307 CASYPVV 313
            A YP++
Sbjct: 318 DAVYPLI 324


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I +G E  L+
Sbjct: 177 CGGGYMTNAFQYVQENRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPVGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C     D+NHA++AVGYG++ G  +W++
Sbjct: 237 RAVARVGPVSVAIDASLSSFQFYSKGVYYDESCNGE--DLNHALLAVGYGMQRGNKHWIL 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG+ GY  +   K N CGIA  AS+P
Sbjct: 295 KNSWGENWGNKGYVLLARNKNNACGIANLASFP 327


>gi|28932706|gb|AAO60047.1| midgut cysteine proteinase 4 [Rhipicephalus appendiculatus]
          Length = 345

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/358 (33%), Positives = 170/358 (47%), Gaps = 80/358 (22%)

Query: 12  ILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGK 71
           +L+LC +A A  + S  DD+                  + + G    A  + +F + Y K
Sbjct: 8   VLILCVSALAQIAPSRQDDN------------------IDIYGHFGKA--WDKFRKIYNK 47

Query: 72  IYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN------------------- 108
            Y + EE   R   F +  + +R+ + K     L Y + +N                   
Sbjct: 48  TYGTSEETVYREQVFRRTFNFLRTVDEKFKNGTLLYSVAVNHFADMTPDEVVANYTGYKP 107

Query: 109 ------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
                                         ++PVK+QG CGSCW FS+TG+LE    +  
Sbjct: 108 PSAQQLAEIPLYAPLFGDTPEFIEWRENGFVTPVKNQGQCGSCWAFSSTGALEGQVFKRT 167

Query: 139 GKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY-TGKDGVCKF 196
            + ISLSEQ L+DCA Q + N GCNGG    AF+Y++  GGLDTE  YPY  G +  C+F
Sbjct: 168 RRLISLSEQNLMDCAGQRYGNNGCNGGQMPGAFQYVQDAGGLDTEARYPYRQGTNFQCQF 227

Query: 197 SS--ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
           S+  E   V V     +    E  LQ AV  V P+S+A       F FYK+G+Y    C 
Sbjct: 228 SNSFEARRVSVNGHTRVPPRNERVLQDAVANVGPISIAINASPQTFMFYKNGIYGEPNC- 286

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 311
             P  +NHAV+ VGYG E GVPYW++KNSWG  WG+ GY K+   +N+CG++   S+P
Sbjct: 287 -DPRGLNHAVLLVGYGEERGVPYWIVKNSWGPGWGEGGYIKILRNRNVCGMSQDPSFP 343


>gi|224081320|ref|XP_002306369.1| predicted protein [Populus trichocarpa]
 gi|222855818|gb|EEE93365.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 154/303 (50%), Gaps = 60/303 (19%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLN-------------- 108
           ++  +YG++Y+   E + R+  F +N+  I + N + G SY+LG+N              
Sbjct: 41  QWMAQYGRVYKDDAEKETRYNIFKENVARIDAFNSQTGKSYKLGVNQFADLSNEEFKASR 100

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             ++PVKDQG CG CW FS   ++E   
Sbjct: 101 NRFKGHMCSPQAGPFRYENVSAVPATMDWRKKGAVTPVKDQGQCGCCWAFSAVAAMEGIN 160

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
               GK ISLSEQ++VDC     +QGCNGGL   AF++I+ N GL TE  YPYTG DG C
Sbjct: 161 QLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYTGTDGTC 220

Query: 195 KFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKC 252
               E     ++    ++   +E  L  AV   +PVSVA +     F+FY SG+++ + C
Sbjct: 221 NTQKEATHAAKITGFEDVPANSEAALMKAVAK-QPVSVAIDAGGFEFQFYSSGIFTGS-C 278

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCA 308
           G     ++H V AVGYG+ DG  YWL+KNSWG  WG+ GY +M+      + +CGIA  A
Sbjct: 279 GT---QLDHGVTAVGYGISDGTKYWLVKNSWGAQWGEEGYIRMQKDISAKEGLCGIAMQA 335

Query: 309 SYP 311
           SYP
Sbjct: 336 SYP 338


>gi|354507493|ref|XP_003515790.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
 gi|344259154|gb|EGW15258.1| Cathepsin L1 [Cricetulus griseus]
          Length = 333

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/221 (45%), Positives = 131/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS  G+LE       G  +SLSEQ LVDC+QA  N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSACGALEGQMCLKTGVLVSLSEQNLVDCSQAEGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+Y+  N GLD+EE+YPY  KDG CK+  E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYVLNNKGLDSEESYPYEAKDGTCKYKPEFAAANDTGYVDIPQ-LEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+++A +     F+FY SG+Y    C +  +D  H V+ VGYG E    + 
Sbjct: 235 LMKAVATVGPIAIAIDASHPSFQFYSSGIYYEPNCSSKELD--HGVLVVGYGFEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YW++KNSWG +WG  G+F +   K N CG+AT ASYP V
Sbjct: 293 KKYWIVKNSWGSSWGMGGFFHIAKDKNNHCGVATAASYPTV 333


>gi|218478069|dbj|BAH03395.1| cathepsin L-like cysteine peptidase [Taenia solium]
          Length = 346

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 136/215 (63%), Gaps = 14/215 (6%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG+CGSCW FS+TG+LE A+ +  GK ISLSEQQLVDC+    N GCNGG  S 
Sbjct: 136 VTEVKNQGNCGSCWAFSSTGALEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSY 195

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGV-QVLDSVNITLGAEDELQHAVGLVR 227
           AF+Y++ +  ++ E AYPY   DG C++ +E++GV  V D  +I  G E  L  AV  V 
Sbjct: 196 AFKYLEEH-FIEPESAYPYRATDGPCRY-NESLGVGTVTDIGDIPEGNETALMEAVATVG 253

Query: 228 PVSVAFEVVD-GFRFYKS-------GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
           P+S+A +    GF FY+        G+Y S  C +  +  NH V+A+GYG +DG PYWL+
Sbjct: 254 PISIAIDASSLGFMFYRQVATNPHHGIYKSHWCSSKFL--NHGVLAIGYGKQDGKPYWLV 311

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSWG  WG  GY  M     NMCG+A+ A +P V
Sbjct: 312 KNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 346


>gi|357474527|ref|XP_003607548.1| Cysteine protease [Medicago truncatula]
 gi|358347211|ref|XP_003637653.1| Cysteine protease [Medicago truncatula]
 gi|355503588|gb|AES84791.1| Cysteine protease [Medicago truncatula]
 gi|355508603|gb|AES89745.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 158/303 (52%), Gaps = 63/303 (20%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS--YRLGLN----------------- 108
            YGK+Y+ ++E + R   F +N++ I ++N  G +  Y+LG+N                 
Sbjct: 47  HYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADLTNEEFIASRNKF 106

Query: 109 --------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQ 136
                                           ++PVK+QG CG CW FS   + E  +  
Sbjct: 107 KGHMCSSITKTSTFKYENASVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKL 166

Query: 137 AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
           + GK +SLSEQ+LVDC     +QGC GGL   AF++I  N GL+TE  YPY G DG C  
Sbjct: 167 STGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCSA 226

Query: 197 SSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGN 254
           +  ++  V +    ++    E  LQ AV   +P+SVA +     F+FYKSGV++ + CG 
Sbjct: 227 NKASIHAVTITGYEDVPANNEQALQKAVA-NQPISVAIDASGSDFQFYKSGVFTGS-CG- 283

Query: 255 TPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCAS 309
              +++H V AVGYGV  DG  YWL+KNSWG +WG+ GY KM+ G    + +CGIA  AS
Sbjct: 284 --TELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAEGLCGIAMEAS 341

Query: 310 YPV 312
           YP 
Sbjct: 342 YPT 344


>gi|33333714|gb|AAQ11975.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 323

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 156/306 (50%), Gaps = 58/306 (18%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK--------------------- 99
            + +F   +GK Y SV E K RF+ F KNL  I+  N K                     
Sbjct: 22  EWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHE 81

Query: 100 ------------------------------GLSYRLGLNISPVKDQGHCGSCWTFSTTGS 129
                                          + +R    ++PVK+QGHCGSCW FS  G+
Sbjct: 82  EFLDLLKLQGVPALPSDAVYFEETDIEEKDAVDWRKEGAVTPVKNQGHCGSCWAFSAVGA 141

Query: 130 LEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           +E  + +  G  +SLS Q+LVDCA + + N+GCNGGL  QAF++++ + G+ TEE+YPY 
Sbjct: 142 IEGQFFKKNGTLVSLSAQELVDCATEYYGNEGCNGGLMGQAFDFVE-DEGIQTEESYPYK 200

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYS 248
            K  +C+ + E V    + + ++ L  E E+  AV    PV+VA +      FY  G+  
Sbjct: 201 AKRSICQMNGEYV--TKVKTYHLLLN-EQEIARAVSAKGPVAVAIDASQ-LSFYDQGIVD 256

Query: 249 ST-KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATC 307
              KC     D+NH V+ VGYG E+GV YW++KNSWG +WG+ GYF+++     CGI   
Sbjct: 257 EKCKCSKKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGNY 316

Query: 308 ASYPVV 313
            +YPV+
Sbjct: 317 NTYPVL 322


>gi|428186189|gb|EKX55040.1| hypothetical protein GUITHDRAFT_63227 [Guillardia theta CCMP2712]
          Length = 344

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/262 (42%), Positives = 146/262 (55%), Gaps = 11/262 (4%)

Query: 60  LSFARFARRY-GKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHC 118
           L+F  F+ +Y G     VE+ K R A   K+    RS     + +R    ++ VK+QG C
Sbjct: 86  LTFEEFSAQYLGYGGAEVEQPKTRRA--GKHERKSRSEIPASVDWREKGAVAEVKNQGAC 143

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FS   +LE A+    G+ ISLSEQQLVDC++ F N GC GG    AFEY   N G
Sbjct: 144 GSCWAFSAVAALEGAHFLNSGELISLSEQQLVDCSKKFGNHGCAGGYMDNAFEYWMNNTG 203

Query: 179 L--DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV 236
              D+E+ YPY G DG CKFS++ V   +    ++  G E +L  AV  V PVSVA    
Sbjct: 204 HGDDSEKDYPYKGMDGKCKFSADGVRATISGYNDVKQGNETDLLDAVANVGPVSVAIHAG 263

Query: 237 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-----GVPYWLIKNSWGENWGDHG 291
              +FY  GV++    G     +NH V AVGYG         + YW+IKNSWG  WG+ G
Sbjct: 264 AALQFYLRGVFNGV-AGTCFGPLNHGVTAVGYGTASLRFGRKMDYWIIKNSWGMGWGEKG 322

Query: 292 YFKMEMGKNMCGIATCASYPVV 313
           + +   GKN+CG+A  ASYP+V
Sbjct: 323 FVRFARGKNLCGVANGASYPLV 344


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/257 (40%), Positives = 140/257 (54%), Gaps = 10/257 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L +A F    G    ++   K      + N+ +  S + +   Y     ++ VK+QG CG
Sbjct: 134 LEYAEFVNFNGLKMTNLNNTKCSSHLSANNIVVPDSVDWRSKGY-----VTKVKNQGACG 188

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FS TGSLE  Y +  GK + LSE QLVDC+ +F N+GCNGG    AF+Y+K  GG+
Sbjct: 189 SCWAFSATGSLEGQYFRKNGKLVPLSESQLVDCSGSFGNEGCNGGFMENAFKYVKSVGGI 248

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDG 238
           ++E  YPY  +   C F    V   V   V++  G+E  L+  V  V PVSVA +     
Sbjct: 249 ESESDYPYKARQRTCAFDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAIDAGHSS 308

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEM 297
           F+ Y  GVY    C  + +  NH V+ VGYG    G  YW++KNSWG  WG  GY KM  
Sbjct: 309 FQLYAGGVYDEPLCSTSRL--NHGVLCVGYGTSLQGKDYWIVKNSWGVRWGVEGYIKMSR 366

Query: 298 GK-NMCGIATCASYPVV 313
            K N CGIA+ ASYP+V
Sbjct: 367 NKNNQCGIASEASYPLV 383


>gi|294883332|ref|XP_002770713.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239873998|gb|EER02718.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 332

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 149/306 (48%), Gaps = 57/306 (18%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L+F  F  ++GK YES EE   R A F  NL  I   N K LSY+LG+N           
Sbjct: 26  LAFMGFKHKFGKNYESKEEEVKRNAIFQANLQHIEQVNAKDLSYKLGVNEHADLTHEEFA 85

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVKDQ  CGSCW FS  G+LE
Sbjct: 86  ALKLSTLDTSTRRDDEFVVEVNTTQLPTSVDWRNKSVLTPVKDQEFCGSCWAFSAIGALE 145

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           A Y  A GK +SLSEQQLVDC+  +  +GC GG    A+EYIK + G+D E  YPY G D
Sbjct: 146 AQYAIATGKLLSLSEQQLVDCSHKYGTKGCRGGYMGDAYEYIK-SAGIDQESTYPYKGWD 204

Query: 192 GVCK---FSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVY 247
             C+     ++ +    +    I    E  L  A+    PVSV  +     F  Y+SGVY
Sbjct: 205 EPCRPREKKADGIPAGEVTGSYILYWTEQSLMDALAYA-PVSVTMDASGADFGLYESGVY 263

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATC 307
           SST C  T   VNHAVVAVGYG E+G  Y++ KNSWG +WG  GYF ++ G    G    
Sbjct: 264 SSTTCNGT---VNHAVVAVGYGTENGSDYFIFKNSWGSSWGMGGYFYLKRGVGGFGECNI 320

Query: 308 ASYPVV 313
             Y VV
Sbjct: 321 LEYMVV 326


>gi|83715950|dbj|BAE54434.1| silicatein [Ephydatia fluviatilis]
          Length = 326

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CG+ + F+ TG++E A   +  K ++LSEQ ++DC+ A+ N G
Sbjct: 114 IDWRTKGAVTSVKNQGDCGASYAFAATGTMEGANALSNDKQVALSEQNIIDCSVAYGNHG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG    A +Y+  NGG+DTE +Y + GK   C+++S+N G     +V+I+ G+E +L 
Sbjct: 174 CSGGDTYTAIKYVVDNGGIDTESSYSFRGKQSSCQYNSKNSGASATGAVSISYGSESDLM 233

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +   + FRFY+SGV+ S+ C +T +  NHA++  GYG  +G  YWL+
Sbjct: 234 SAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTKL--NHAMLVTGYGSYNGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG+ WGD GY  M   K N CGIA+ A Y ++
Sbjct: 292 KNSWGKYWGDSGYIMMVRNKYNQCGIASDALYSML 326


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 121 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 179 CGGGYMTNAFHYVQKNQGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYKEIPEGNEKALK 238

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++    +W+I
Sbjct: 239 RAVARVGPISVAIDASLTSFQFYSKGVYYDKNCNSD--NLNHAVLAVGYGIQKRKKHWII 296

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  M   K N CGIA  AS+P
Sbjct: 297 KNSWGESWGNKGYILMARNKNNACGIANLASFP 329


>gi|339252572|ref|XP_003371509.1| cathepsin L1 [Trichinella spiralis]
 gi|316968239|gb|EFV52542.1| cathepsin L1 [Trichinella spiralis]
          Length = 448

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 136/243 (55%), Gaps = 38/243 (15%)

Query: 109 ISPVKDQGHCGSCWTFST---------------TGSLEAAYHQAFGKGISLSEQQLVDCA 153
           ++PVKDQGHCGSCW FS                TG+LE    +  GK +SLSEQ L+DC+
Sbjct: 206 VTPVKDQGHCGSCWAFSAVNSNALHVHSRAFQQTGALEGQNKRKTGKLVSLSEQNLIDCS 265

Query: 154 QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK----DGVCKFSSENVGVQVLDSV 209
           + + N+GC+GGL   AFEY+K N G+DTEE+YPY       D  C+F +  +G      V
Sbjct: 266 RKYGNKGCSGGLMDNAFEYVKENHGIDTEESYPYEAAVRMLDKKCRFKNSTIGATDKGFV 325

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNT------------- 255
           +I  G E  L HAV  + P+SVA +   + F+FY SG+       NT             
Sbjct: 326 DIEPGNETYLMHAVATIGPLSVAIDASHESFQFYSSGMLLMVDIFNTVEVMWTNLGVYFE 385

Query: 256 PM----DVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASY 310
           PM     ++H V+ VGYG   G  YW++KNSWG +WG+ GY  M   K N CGIA+ ASY
Sbjct: 386 PMCSSQFLDHGVLVVGYGSLKGKDYWIVKNSWGTSWGNDGYIFMARNKNNSCGIASFASY 445

Query: 311 PVV 313
           P++
Sbjct: 446 PII 448


>gi|33242865|gb|AAQ01137.1| cathepsin [Branchiostoma lanceolatum]
          Length = 328

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/207 (48%), Positives = 126/207 (60%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+Q  CGSCW FSTTGSLE  + ++  K +SLSEQ LVDC++     G  G L  Q
Sbjct: 126 VTPVKNQEQCGSCWAFSTTGSLEGQHFKSTQKLVSLSEQNLVDCSRK-RGTGLPGRLMDQ 184

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
            F+YIK NGG+DTEE YPY  K+  C + +   G  +        G    LQ AV  V P
Sbjct: 185 GFKYIKDNGGIDTEECYPYKAKNEKCNYQASCSGATLTAKRRQDEG-RGALQQAVATVGP 243

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           +SVA +     F+ Y+SGVY    C  T MD  H V+AVGYG E+G  YWL+KNSWG +W
Sbjct: 244 ISVAIDAGHSSFQLYQSGVYHKFFCSETKMD--HGVLAVGYGTEEGKDYWLVKNSWGASW 301

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY KM   + N  GIAT ASYP V
Sbjct: 302 GEKGYIKMSRNRHNNWGIATSASYPTV 328


>gi|357474573|ref|XP_003607571.1| Cysteine proteinase EP-B [Medicago truncatula]
 gi|34329348|gb|AAQ63885.1| putative cysteine proteinase [Medicago truncatula]
 gi|355508626|gb|AES89768.1| Cysteine proteinase EP-B [Medicago truncatula]
          Length = 345

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 158/303 (52%), Gaps = 63/303 (20%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS--YRLGLN----------------- 108
            YGK+Y+ ++E + R   F +N++ I ++N  G +  Y+LG+N                 
Sbjct: 47  HYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADLTNEEFIASRNKF 106

Query: 109 --------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQ 136
                                           ++PVK+QG CG CW FS   + E  +  
Sbjct: 107 KGHMCSSITKTSTFKYENASVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKL 166

Query: 137 AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
           + GK +SLSEQ+LVDC     +QGC GGL   AF++I  N GL+TE  YPY G DG C  
Sbjct: 167 STGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCSA 226

Query: 197 SSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGN 254
           +  ++  V +    ++    E  LQ AV   +P+SVA +     F+FYKSGV++ + CG 
Sbjct: 227 NKASIHAVTITGYEDVPANNEQALQKAVA-NQPISVAIDASGSDFQFYKSGVFTGS-CG- 283

Query: 255 TPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCAS 309
              +++H V AVGYGV  DG  YWL+KNSWG +WG+ GY KM+ G    + +CGIA  AS
Sbjct: 284 --TELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAEGLCGIAMEAS 341

Query: 310 YPV 312
           YP 
Sbjct: 342 YPT 344


>gi|312091978|ref|XP_003147174.1| fibroinase [Loa loa]
 gi|307757661|gb|EFO16895.1| fibroinase [Loa loa]
          Length = 286

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/236 (41%), Positives = 144/236 (61%), Gaps = 24/236 (10%)

Query: 86  FSKNLDLIRSTNCK---GLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI 142
           F K   ++ S N +    + +R+   ++PVKDQG CGSCW FS+TG+LE  +++  G+ I
Sbjct: 54  FGKKNVILLSANSRLPEKVDWRIKGAVTPVKDQGRCGSCWAFSSTGALEGQHYRRTGRLI 113

Query: 143 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG 202
           SLSEQ L+DC++ + N GC+GGL   AF+YIK NGG+D+E AYPY  K+G C++S+    
Sbjct: 114 SLSEQNLLDCSEDYGNSGCSGGLMDYAFDYIKENGGIDSESAYPYEAKEGPCRYSNRTRV 173

Query: 203 VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRF---YKSGVYSSTKCGNTPMDV 259
                 V++  G E +LQ AV  + P+SVA       R+   Y+ G       GN  +  
Sbjct: 174 STDNGEVDLPEGDEMQLQRAVAKIGPISVAMNA----RYLSSYEEGY------GNEKVKR 223

Query: 260 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 314
            +  V       + + YW++KNSWG++WG+ GYF++   K NMCGIA+ ASYP+V+
Sbjct: 224 ENGTV-------EDLDYWIVKNSWGKDWGEDGYFRLARNKDNMCGIASAASYPIVS 272


>gi|109390302|gb|ABG33750.1| cysteine protease [Hevea brasiliensis]
          Length = 457

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 154/303 (50%), Gaps = 64/303 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           ++GK Y S+ E + RF  F  NL  I   N +  +YR+GLN                   
Sbjct: 48  KHGKAYNSLGEKERRFEVFKDNLRFIDEHNSENRTYRVGLNRFADLTNEEYRSMYLGALS 107

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            +  VKDQG CGSCW FS   ++E    
Sbjct: 108 GIRRNKLRKISDRYTPRVGDSLPDSVDWRKEGAVVGVKDQGSCGSCWAFSAVAAVEGINK 167

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 195
              G  ISLSEQ+LVDC  ++N +GCNGGL    FE+I  NGG+D+EE YPY  +DG C 
Sbjct: 168 IVTGDLISLSEQELVDCDNSYN-EGCNGGLMDYGFEFIINNGGIDSEEDYPYLARDGRCD 226

Query: 196 FSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCG 253
              +N  V  +DS  ++ +  E  LQ AV   +PVSVA E     F+ Y SGV+S  +CG
Sbjct: 227 TYRKNARVVSIDSYEDVPVNNEAALQKAVA-NQPVSVAIEAGGRDFQLYSSGVFSG-RCG 284

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCAS 309
                ++H VVAVGYG E+G  YW+++NSWG++WG+ GY +M         +CGIA  AS
Sbjct: 285 TA---LDHGVVAVGYGTENGQDYWIVRNSWGKSWGESGYLRMARNIRKPTGICGIAMEAS 341

Query: 310 YPV 312
           YP+
Sbjct: 342 YPI 344


>gi|186516984|ref|NP_195406.2| cysteine proteinase1 [Arabidopsis thaliana]
 gi|15290508|gb|AAK92229.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332661313|gb|AEE86713.1| cysteine proteinase1 [Arabidopsis thaliana]
          Length = 376

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 156/274 (56%), Gaps = 23/274 (8%)

Query: 56  ARHALSFARFAR----RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG------LSYRL 105
           A + L   +F       Y K+Y        R    +KN++   S    G      + +R 
Sbjct: 94  ATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQ 153

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++P+KDQG CGSCW FSTT ++E       G+ ISLSEQ+LVDC +++N QGCNGGL
Sbjct: 154 KGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYN-QGCNGGL 212

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVG 224
              AF++I  NGGL+TE+ YPY G  G C    +N  V  +D   ++    E  L+ A+ 
Sbjct: 213 MDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAIS 272

Query: 225 LVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
             +PVSVA E     F+ Y+SG+++ + CG    +++HAVVAVGYG E+GV YW+++NSW
Sbjct: 273 Y-QPVSVAIEAGGRIFQHYQSGIFTGS-CG---TNLDHAVVAVGYGSENGVDYWIVRNSW 327

Query: 284 GENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           G  WG+ GY +ME          CGIA  ASYPV
Sbjct: 328 GPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361


>gi|5822035|pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L
          Length = 316

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGS W FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 99  RSVDWREKGYVTPVKNQGQCGSXWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 158

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 159 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKA 217

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 218 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 275

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 276 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316


>gi|307175098|gb|EFN65240.1| Cathepsin L [Camponotus floridanus]
          Length = 319

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 144/244 (59%), Gaps = 31/244 (12%)

Query: 74  ESVEEMKLRFATFSK--NLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLE 131
           E+V E +L  ATF +  N++L +S +     +R    ++ +KDQG CGSCW FS+TG+LE
Sbjct: 103 ETVSEEQLIGATFIEPVNVELAKSVD-----WRTNGAVTAIKDQGQCGSCWAFSSTGALE 157

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
             + +  G  +SLSEQ L+DC+  + N GCNGGL   AF YIK N GLDTE++YPY  ++
Sbjct: 158 GQHFRQSGVLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFRYIKENKGLDTEKSYPYEAEN 217

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
             C+++ +N G   +  V+I  G ED+L+ AV  + P+SVA +   + F+FY  G     
Sbjct: 218 DQCRYNPKNSGASDVGFVDIPEGDEDKLKAAVATIGPISVAIDASHESFQFYSEGT---- 273

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCAS 309
            C    +D                 YWL+KNSWGE WG+ GY KM    KN CGIA+ AS
Sbjct: 274 -CYTCNID-----------------YWLVKNSWGETWGEKGYIKMARNKKNHCGIASSAS 315

Query: 310 YPVV 313
           YP+V
Sbjct: 316 YPLV 319


>gi|46395939|sp|Q94B08.2|GCP1_ARATH RecName: Full=Germination-specific cysteine protease 1; Flags:
           Precursor
 gi|4006883|emb|CAB16767.1| cysteine proteinase [Arabidopsis thaliana]
 gi|7270637|emb|CAB80354.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 156/274 (56%), Gaps = 23/274 (8%)

Query: 56  ARHALSFARFAR----RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG------LSYRL 105
           A + L   +F       Y K+Y        R    +KN++   S    G      + +R 
Sbjct: 94  ATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQ 153

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++P+KDQG CGSCW FSTT ++E       G+ ISLSEQ+LVDC +++N QGCNGGL
Sbjct: 154 KGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYN-QGCNGGL 212

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVG 224
              AF++I  NGGL+TE+ YPY G  G C    +N  V  +D   ++    E  L+ A+ 
Sbjct: 213 MDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAIS 272

Query: 225 LVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
             +PVSVA E     F+ Y+SG+++ + CG    +++HAVVAVGYG E+GV YW+++NSW
Sbjct: 273 Y-QPVSVAIEAGGRIFQHYQSGIFTGS-CG---TNLDHAVVAVGYGSENGVDYWIVRNSW 327

Query: 284 GENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           G  WG+ GY +ME          CGIA  ASYPV
Sbjct: 328 GPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361


>gi|109939734|sp|P25776.2|ORYA_ORYSJ RecName: Full=Oryzain alpha chain; Flags: Precursor
 gi|78192122|gb|ABB30151.1| oryzain alpha [Oryza sativa Japonica Group]
          Length = 458

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 158/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN         
Sbjct: 40  YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ +KDQG CGSCW FS  
Sbjct: 100 YRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAI 159

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N +GCNGGL   AF++I  NGG+DTE+ YPY
Sbjct: 160 AAVEGINQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFDFIINNGGIDTEDDYPY 218

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
            GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 219 KGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVA-NQPVSVAIEAGGRAFQLYSSG 277

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         
Sbjct: 278 IFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGK 333

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 334 CGIAVEPSYPL 344


>gi|291463491|pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant
 gi|291463492|pdb|3IV2|B Chain B, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant
 gi|291463519|pdb|3K24|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant In
           Complex With Gln-Leu-Ala Peptide
 gi|291463520|pdb|3K24|B Chain B, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant In
           Complex With Gln-Leu-Ala Peptide
          Length = 220

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGS W FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 3   RSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 63  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKA 121

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 122 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 179

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 180 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|294883340|ref|XP_002770717.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239874002|gb|EER02722.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 333

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 158/313 (50%), Gaps = 69/313 (22%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L+F  F  ++GK YES EE   R A F  NL  I   N K LSY+LG+N           
Sbjct: 26  LAFMGFQHKFGKNYESKEEEVKRNAIFQANLHHIEHVNAKNLSYKLGVNEHADLTHEEFA 85

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +SPVK+QG CGSCW FS  G+LE
Sbjct: 86  ALKLGTLEMSTRRDDKFVVEADTTQLPTSVDWRNKSVLSPVKNQGSCGSCWAFSAAGALE 145

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           A Y  A GK   LS Q+LVDC+ ++ N+GC GGL + A++YIK + GLD E  YPY G +
Sbjct: 146 AQYAIATGKLRPLSVQELVDCSSSYGNKGCLGGLMTNAYKYIK-SAGLDQESTYPYKGWN 204

Query: 192 GVCKFSSEN----VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGV 246
             C  SSE     +    +   ++    E  L  A+    PVS+A    D  FRFY+SGV
Sbjct: 205 KHCFRSSEKKADGIPAGEVTGSHMLAQTEQSLMKALAAA-PVSLAMYARDRNFRFYRSGV 263

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-------- 298
           YSST C     +++H VVAVGYG + G  Y+++KNSWG +WG  GYF ++ G        
Sbjct: 264 YSSTTCNG---EIDHGVVAVGYGADKGSDYFILKNSWGSSWGIGGYFYLKRGVGGFGECK 320

Query: 299 --KNMCGIATCAS 309
             +NMC +AT  S
Sbjct: 321 ILENMC-VATLKS 332


>gi|208972990|dbj|BAG74344.1| silicatein-M3 [Ephydatia fluviatilis]
          Length = 326

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/215 (44%), Positives = 134/215 (62%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK QG CG+ + F+ TG+LE A   A  K + LSEQ ++DC+  + N G
Sbjct: 114 IDWRTKGAVTSVKYQGQCGASYAFAATGALEGASALANDKQVILSEQNIIDCSVPYGNHG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG    A +Y+  NGG+DTE +Y + GK   C++SS+N G      ++IT G+E +L 
Sbjct: 174 CSGGDTYTAMKYVIDNGGIDTESSYSFQGKQSSCQYSSKNSGASATGVISITSGSETDLL 233

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +   + FRFY+SGV+ S+ C NT    NHA++  GYG  +G  YWL+
Sbjct: 234 AAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSNTK--PNHAMLVTGYGSYNGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSW +NWGD+GY  M   K N C IAT A YP +
Sbjct: 292 KNSWSKNWGDNGYILMVRNKYNQCAIATDALYPTL 326


>gi|31982433|ref|NP_031828.2| cathepsin K precursor [Mus musculus]
 gi|12644320|sp|P55097.2|CATK_MOUSE RecName: Full=Cathepsin K; Flags: Precursor
 gi|3550487|emb|CAA06825.1| cathepsin K [Mus musculus]
 gi|12834090|dbj|BAB22783.1| unnamed protein product [Mus musculus]
 gi|28277388|gb|AAH46320.1| Cathepsin K [Mus musculus]
 gi|74209960|dbj|BAE21279.1| unnamed protein product [Mus musculus]
 gi|148706870|gb|EDL38817.1| cathepsin K, isoform CRA_a [Mus musculus]
          Length = 329

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 IDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT--ENYG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ NGG+D+E+AYPY G+D  C +++     +      I +G E  L+
Sbjct: 177 CGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  +W+I
Sbjct: 237 RAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct: 295 KNSWGESWGNKGYALLARNKNNACGITNMASFP 327


>gi|222629675|gb|EEE61807.1| hypothetical protein OsJ_16426 [Oryza sativa Japonica Group]
          Length = 459

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 158/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN         
Sbjct: 41  YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 100

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ +KDQG CGSCW FS  
Sbjct: 101 YRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAI 160

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N +GCNGGL   AF++I  NGG+DTE+ YPY
Sbjct: 161 AAVEGINQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFDFIINNGGIDTEDDYPY 219

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
            GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 220 KGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVA-NQPVSVAIEAGGRAFQLYSSG 278

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         
Sbjct: 279 IFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGK 334

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 335 CGIAVEPSYPL 345


>gi|146386731|pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor
           Bound To Cathepsin K
          Length = 215

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +A G  ++L+ Q LVDC     N G
Sbjct: 5   IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKATGALLNLAPQNLVDCVS--ENDG 62

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+
Sbjct: 63  CGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEAALK 122

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY +GVY    C +  +  NHAV+AVGYG++ G  +W+I
Sbjct: 123 RAVAAVGPVSVAIDASLTSFQFYSAGVYYDENCSSDAL--NHAVLAVGYGIQAGNKHWII 180

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  M   K N CGIA  AS+P
Sbjct: 181 KNSWGESWGNAGYILMARNKNNACGIANLASFP 213


>gi|157835400|pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor,
           Chagasin, In Complex With Human Cathepsin L
          Length = 221

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGS W FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 4   RSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 63

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 64  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKA 122

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 123 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 180

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 181 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 221


>gi|354502589|ref|XP_003513366.1| PREDICTED: testin-2-like [Cricetulus griseus]
          Length = 333

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/221 (45%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K +++R    ++PVK QGHC S W FS TG+LE    +   K  +LSEQ L+DC +    
Sbjct: 116 KQVNWREQGYVTPVKSQGHCASSWAFSATGALEGQMFKKTRKLNALSEQNLLDCMEFNVT 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           + C+GG    AF+Y++ NGGL TEE+YPY G    C++ ++N    V D V I  G E+ 
Sbjct: 176 RSCSGGFMQSAFQYVRDNGGLATEESYPYQGHAMECRYQAKNSAANVKDFVQIP-GHEEA 234

Query: 219 LQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +     F+FY+SG+Y   KC       NHAV+ VGYG E    DG
Sbjct: 235 LMKAVANVGPISVAIDARHSSFQFYESGIYYEPKCKRVHQ--NHAVLVVGYGFEGEESDG 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY K+     N CGIAT A+YP+V
Sbjct: 293 NSYWLVKNSWGEEWGIKGYMKIAKDWNNHCGIATHATYPIV 333


>gi|291383488|ref|XP_002708302.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 344

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 133/218 (61%), Gaps = 9/218 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           L +R    ++PVK+Q  CGS W FS TG+LE    +  G+ +SLSEQ LVDC+    NQG
Sbjct: 118 LDWRERGYVTPVKNQELCGSSWAFSATGALEGQMFRKTGRLVSLSEQNLVDCSWPQGNQG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   AF+Y+K N GLD+EE+YPY  + G CK++       V   V+++   E  L 
Sbjct: 178 CSGGLMDYAFQYVKDNRGLDSEESYPYEQRKGSCKYNPRFSAANVTGFVDVS-KDEKALM 236

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED----GVP 275
            AV  V PVSV      + F FY+ G+Y   KC +   +VNHAV+ VGYG E+       
Sbjct: 237 EAVATVGPVSVGIATTPESFLFYEGGIYYDPKCSSE--NVNHAVLVVGYGFEEVGSKNNK 294

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 312
           YWLIKNSWG++WG  GY KM   + N CGIAT ASYP+
Sbjct: 295 YWLIKNSWGKDWGMGGYMKMAKDQNNHCGIATAASYPL 332


>gi|218195711|gb|EEC78138.1| hypothetical protein OsI_17694 [Oryza sativa Indica Group]
          Length = 458

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 158/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN         
Sbjct: 40  YAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ +KDQG CGSCW FS  
Sbjct: 100 YRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAI 159

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N +GCNGGL   AF++I  NGG+DTE+ YPY
Sbjct: 160 AAVEGINQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFDFIINNGGIDTEDDYPY 218

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
            GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 219 KGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVA-NQPVSVAIEAGGRAFQLYSSG 277

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         
Sbjct: 278 IFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGK 333

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 334 CGIAVEPSYPL 344


>gi|288764223|emb|CAQ03432.1| silcatein 1 [Spongilla lacustris]
 gi|296168747|emb|CAQ54051.1| silicatein alpha 3 [Spongilla lacustris]
          Length = 327

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 138/223 (61%), Gaps = 10/223 (4%)

Query: 99  KGLSYRLGLN------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 152
           KG+SY   ++      ++ VK Q  CGS + F+  G+LE A   A  K ++LSEQ ++DC
Sbjct: 107 KGVSYADSMDWRTKGVVTSVKTQSQCGSSYAFAAVGALEGASALATDKLVALSEQNIIDC 166

Query: 153 AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNIT 212
           +  + N GC+GG    AF+Y+  NGG+DTE +YPY GK   C+++S+N G      V I 
Sbjct: 167 SVPYGNHGCSGGDTYTAFKYVVDNGGIDTESSYPYKGKQSSCQYNSKNAGATATGVVKIA 226

Query: 213 LGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 271
            G+E +L  AV    PV+VA +  V+ F FY+SGV+ S+ C NT +  NHA++  GYG  
Sbjct: 227 SGSESDLMSAVASGGPVAVAVDASVNSFMFYQSGVFDSSTCSNTKL--NHAMLVTGYGSV 284

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +G  YWL+KNSWG +WG+ GY +M   K N CGIA+ A  P++
Sbjct: 285 NGKDYWLVKNSWGTSWGESGYIRMVRNKYNQCGIASDALIPML 327


>gi|118627554|emb|CAL64936.1| putative cysteine protease 8 [Trifolium pratense]
          Length = 344

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 157/308 (50%), Gaps = 64/308 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG--LSYRLGLN------------- 108
           ++  +YGKIY+  +E + RF  F +N++ I + N      SY+LG+N             
Sbjct: 41  QWMSQYGKIYKDHQERETRFKIFKENVNYIETFNNADDTKSYKLGINQFADLTNEEFIAS 100

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVK+QG CG CW FS   + E
Sbjct: 101 RNKFKGHMCSSIMRTTSFKYENVSGIPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATE 160

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
             +  + GK ISLSEQ+LVDC     +QGC GGL   AF++I  N GL TE  YPY G D
Sbjct: 161 GIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVD 220

Query: 192 GVCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           G C  +  +V  V +    ++   +E  LQ AV   +P+SVA +     F+FYKSGV++ 
Sbjct: 221 GTCNANKASVQAVTITGYEDVPANSEQALQKAVA-NQPISVAIDASGSDFQFYKSGVFTG 279

Query: 250 TKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGI 304
             CG    +++H V AVGYGV  DG  YWL+KNSWG +WG+ GY  M+ G    + +CGI
Sbjct: 280 A-CGT---ELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGIEAAEGICGI 335

Query: 305 ATCASYPV 312
           A  ASYP 
Sbjct: 336 AMQASYPT 343


>gi|295321664|pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In
           Compl Chondroitin-4-Sulfate
 gi|295321665|pdb|3H7D|E Chain E, The Crystal Structure Of The Cathepsin K Variant M5 In
           Compl Chondroitin-4-Sulfate
          Length = 215

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 5   VDYREKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDG 62

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+
Sbjct: 63  CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALK 122

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG   G  +W+I
Sbjct: 123 RAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGESKGNKHWII 180

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGENWG  GY KM   K N CGIA  AS+P
Sbjct: 181 KNSWGENWGMGGYIKMARNKNNACGIANLASFP 213


>gi|402856107|ref|XP_003892641.1| PREDICTED: cathepsin S isoform 2 [Papio anubis]
          Length = 281

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/256 (41%), Positives = 145/256 (56%), Gaps = 12/256 (4%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNISPVKDQGHCGS 120
           + + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   + D G CG+
Sbjct: 31  WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMN--HLGDMGSCGA 88

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGL 179
           CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  ++AF+YI  N G+
Sbjct: 89  CWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGI 148

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-G 238
           D++ +YPY   D  C++ S+           +  G ED L+  V    PVSV  +     
Sbjct: 149 DSDASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPS 208

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y+SGVY    C     +VNH V+ VGYGV +G  YWL+KNSWG N+G+ GY +M   
Sbjct: 209 FFLYRSGVYYEPSC---TQNVNHGVLVVGYGVLNGKEYWLVKNSWGRNFGEEGYIRMARN 265

Query: 299 K-NMCGIATCASYPVV 313
           K N CGIA+  SYP +
Sbjct: 266 KGNHCGIASFPSYPEI 281


>gi|294890024|ref|XP_002773045.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239877748|gb|EER04861.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 329

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/303 (39%), Positives = 147/303 (48%), Gaps = 54/303 (17%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------- 108
           L+F  F  ++GK YES EE   R A F  NL  I   N K LSY+LG+N           
Sbjct: 26  LAFMGFQHKFGKNYESKEEEVKRNAIFQANLHHIEHVNAKNLSYKLGVNEHADLTHEEFA 85

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVK+QG CGS W FSTTG+L 
Sbjct: 86  ALKLGTLKMSTRRDDEFVVEADTTQLPTSVDWRNKSVLTPVKNQGSCGSSWAFSTTGALG 145

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
           A Y  A GK +SLSEQ+LVDC+  + N GC GG    A+EYI    GLD E  YPY G D
Sbjct: 146 AQYAIATGKLLSLSEQELVDCSLKYGNDGCIGGYMGAAYEYIN-QAGLDQESTYPYKGWD 204

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSST 250
             C  SSE     +     +    E  L  A+    PVSV     D  FRFY+SGVYSST
Sbjct: 205 EPCFRSSEKKADGIPVRFVLNTKTEQSLMKALADA-PVSVGMYASDPNFRFYRSGVYSST 263

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            C     + +HAVVAVGYG + G  Y+++KNSWG  WG  GYF ++ G    G      Y
Sbjct: 264 TCNG---ETDHAVVAVGYGADKGSDYFILKNSWGSKWGIGGYFFLKRGVGGHGECNILEY 320

Query: 311 PVV 313
            +V
Sbjct: 321 MLV 323


>gi|218181|dbj|BAA14402.1| oryzain alpha precursor [Oryza sativa Japonica Group]
          Length = 458

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 158/311 (50%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN         
Sbjct: 40  YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ +KDQG CGSCW FS  
Sbjct: 100 YRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAI 159

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N +GCNGGL   AF++I  NGG+DTE+ YPY
Sbjct: 160 AAVEDINQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFDFIINNGGIDTEDDYPY 218

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSG 245
            GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 219 KGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAV-RNQPVSVAIEAGGRAFQLYSSG 277

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         
Sbjct: 278 IFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGK 333

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 334 CGIAVEPSYPL 344


>gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
          Length = 474

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 135/211 (63%), Gaps = 13/211 (6%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FST G++E       G+ ISLSEQ+LVDC   + NQGCNGGL   
Sbjct: 162 VAPVKDQGQCGSCWAFSTVGAVEGINKIVTGELISLSEQELVDCDNGY-NQGCNGGLMDY 220

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVR 227
           AFE+I  NGG+DTE+ YPY G DG+C  + +N  V  ++   ++    E  L+ AV   +
Sbjct: 221 AFEFIVKNGGIDTEDDYPYKGVDGLCDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAH-Q 279

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           PVSVA E     F+ Y+SGV++  +CG    +++H VVAVGYG E+G  YW+++NSWG +
Sbjct: 280 PVSVAIEAGGRAFQLYESGVFTG-QCGT---ELDHGVVAVGYGSENGKDYWIVRNSWGPD 335

Query: 287 WGDHGYFKME-----MGKNMCGIATCASYPV 312
           WG+ GY ++E          CGIA  ASYP 
Sbjct: 336 WGESGYIRLERNVASTSTGKCGIAMQASYPT 366


>gi|449525012|ref|XP_004169515.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 459

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/309 (38%), Positives = 160/309 (51%), Gaps = 64/309 (20%)

Query: 62  FARFARRYGKIYESV-EEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNI----------- 109
           + ++  ++GK++ ++  E + RF  F  NL  I   N + L YRLGLN+           
Sbjct: 41  YDQWRAKHGKLHNNLGAEPENRFHIFKDNLKFIDEINAQNLPYRLGLNVFADLTNEEYRS 100

Query: 110 ----------------------------------------SPVKDQGHCGSCWTFSTTGS 129
                                                   +PVKDQG CGSCW FST  S
Sbjct: 101 RYLGGKFASGSRRNRTSNRYLPRLGDDLPDSIDWRAKGAVAPVKDQGSCGSCWAFSTVAS 160

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 189
           +EA      G  I+LSEQ+LVDC +++ N+GCNGGL   AFE+I  NGGLDTEE YPY G
Sbjct: 161 VEAINQIVTGDLIALSEQELVDCDRSY-NEGCNGGLMDYAFEFIIENGGLDTEEDYPYYG 219

Query: 190 KDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFE-VVDGFRFYKSGVY 247
            D  C    +N  V  +DS  ++ +  E  LQ AV   + VSVA E     F+ Y+SG++
Sbjct: 220 FDSSCIQYKKNAKVVAIDSYEDVPVNNEKALQKAVS-KQVVSVAIEGGGRSFQLYQSGIF 278

Query: 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCG 303
           +  +CG    D++H V  VGYG E GV YW+++NSWG +WG+ GY KM+        +CG
Sbjct: 279 TG-RCG---TDLDHGVNVVGYGSEGGVDYWIVRNSWGGSWGESGYVKMQRNIASPTGLCG 334

Query: 304 IATCASYPV 312
           IA   SYP 
Sbjct: 335 IAMEPSYPT 343


>gi|170292465|pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin
           L
 gi|170292466|pdb|3BC3|B Chain B, Exploring Inhibitor Binding At The S Subsites Of Cathepsin
           L
 gi|261824911|pdb|3H8C|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors (Compound 14)
 gi|261824912|pdb|3H8C|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors (Compound 14)
          Length = 220

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGS W FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 3   RSVDWREKGYVTPVKNQGQCGSXWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 63  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKA 121

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 122 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDN 179

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 180 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis]
          Length = 1036

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 161/331 (48%), Gaps = 65/331 (19%)

Query: 43   RDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRS------- 95
            +++   +LQ   Q +  + F  F  +Y K+Y + EE ++RF  F  NL+LI         
Sbjct: 712  QNYSQKMLQQSRQLKEEILFHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMG 771

Query: 96   ------------TNCKGLSYRLGLN--------------------------------ISP 111
                        T  +  +  LGL                                 ++P
Sbjct: 772  TGRYGVTQFTDLTKAEFKARHLGLKPTLKSENDIPMPMATIPDIELPSDYDWRHHNVVTP 831

Query: 112  VKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFE 171
            VKDQG CGSCW FS TG++E  Y    G+ +SLSEQ+LVDC +   + GCNGGLP  A+ 
Sbjct: 832  VKDQGSCGSCWAFSVTGNIEGQYAIKHGELLSLSEQELVDCDKL--DSGCNGGLPDTAYR 889

Query: 172  YIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PV 229
             I+  GGL+ E  YPY  +D  C F+   V V ++  +NIT    +E Q A  LV+  P+
Sbjct: 890  AIEELGGLELESDYPYDAEDEKCHFNKNKVKVNIVSGLNIT---SNETQMAQWLVKNGPM 946

Query: 230  SVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV------EDGVPYWLIKNSW 283
            S+     +  +FY  GV    K   +P  ++H V+ VGYGV      +  +PYW+IKNSW
Sbjct: 947  SIGIN-ANAMQFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVKFYPIFKKTMPYWIIKNSW 1005

Query: 284  GENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
            G  WG+ GY+++  G   CG+    +  VVA
Sbjct: 1006 GPRWGEQGYYRVYRGDGTCGVNKMVTSAVVA 1036


>gi|6448469|dbj|BAA86911.1| homologue of Sarcophaga 26,29kDa proteinase [Periplaneta americana]
          Length = 552

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 135/224 (60%), Gaps = 2/224 (0%)

Query: 89  NLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
           NLD I       L +R+   ++PVKDQ  CGSCW+F TTG++E AY   +G  + LS+Q 
Sbjct: 326 NLDAIMDQIPDDLDWRIYGAVTPVKDQSVCGSCWSFGTTGTIEGAYFLKYGHLVRLSQQA 385

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVGVQVLD 207
           L+DC+  + N GC+GG   +++E++  +GG+  E+ Y  Y G+DG C   +  +  ++  
Sbjct: 386 LIDCSWGYGNNGCDGGEDFRSYEWMMKHGGIPLEDEYGGYLGQDGYCHVENVTLTAKITG 445

Query: 208 SVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266
            VN+T G  D L+ A+    P+SVA +     F FY +G+Y   +CGN    ++HAV+ V
Sbjct: 446 YVNVTSGDIDALKVALAKHGPISVAIDASHKTFSFYSNGIYYDPECGNKLDQLDHAVLLV 505

Query: 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           GYG+ +G PYWL+KNSW   WG+ GY  M    N CG+AT  +Y
Sbjct: 506 GYGIINGNPYWLVKNSWSNYWGNDGYILMSPKDNNCGVATDPTY 549


>gi|395844675|ref|XP_003795081.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/221 (45%), Positives = 131/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS+TG+LE    +  GK ISLSEQ LVDC+Q   N
Sbjct: 116 KSVDWRKKGYVTPVKNQGQCGSCWAFSSTGALEGQMFRKTGKLISLSEQNLVDCSQRQGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL + AF Y+K NGGLD+E +YPY  +D  CK+  E         VNI    E  
Sbjct: 176 HGCSGGLMNFAFNYVKENGGLDSEVSYPYVARDEKCKYKPEYSVANDTGFVNIPT-QEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV ++ P+S+A +      +FYKSG+Y    C +  +D  H V+ +GYG E    D 
Sbjct: 235 LMKAVAIIGPISIAIDASHISIQFYKSGIYYEPNCSSKNLD--HGVLLIGYGFEGTDSDD 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             +W IKNSWG  WG  G  K+   K N CGIA+ ASYP V
Sbjct: 293 NKFWFIKNSWGIEWGLDGCIKIAKDKNNHCGIASAASYPTV 333


>gi|146216004|gb|ABQ10204.1| cysteine protease Cp6 [Actinidia deliciosa]
          Length = 461

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/206 (48%), Positives = 128/206 (62%), Gaps = 11/206 (5%)

Query: 112 VKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFE 171
           VKDQG CGSCW FST  ++E       G  ISLSEQ+LVDC  ++N +GCNGGL   AFE
Sbjct: 149 VKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFE 207

Query: 172 YIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVS 230
           +I  NGG+DTEE YPY  +DG C    +N  V  +D   ++ +  E  LQ AV   +PVS
Sbjct: 208 FIIKNGGIDTEEDYPYNARDGRCDQYRKNAKVVTIDDYEDVPVNNEQALQKAVA-NQPVS 266

Query: 231 VAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGD 289
           VA E     F+FY+SGV++    GN    ++H V AVGYG E+ V YW++KNSWG +WG+
Sbjct: 267 VAIEASGMAFQFYESGVFT----GNCGTALDHGVTAVGYGTENSVDYWIVKNSWGSSWGE 322

Query: 290 HGYFKMEM---GKNMCGIATCASYPV 312
            GY +ME        CGIA   SYP+
Sbjct: 323 SGYIRMERNTGATGKCGIAVEPSYPI 348


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/290 (39%), Positives = 146/290 (50%), Gaps = 61/290 (21%)

Query: 78  EMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------------------------- 108
           E   RF  F  NL  I   N K LSY+LGL                              
Sbjct: 70  EKDQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRSMYLGAKPTKRVLKTSDR 129

Query: 109 --------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQ 148
                               ++ VKDQG CGSCW FST G++E       G  ISLSEQ+
Sbjct: 130 YQARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQE 189

Query: 149 LVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS 208
           LVDC  ++N QGCNGGL   AFE+I  NGG+DTE  YPY   DG C  + +N  V  +DS
Sbjct: 190 LVDCDTSYN-QGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGRCDQNRKNAKVVTIDS 248

Query: 209 V-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266
             ++   +E  L+ A+   +P+SVA E     F+ Y SGV+    CG    +++H VVAV
Sbjct: 249 YEDVPENSEASLKKALAH-QPISVAIEAGGRAFQLYSSGVFDGL-CGT---ELDHGVVAV 303

Query: 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKM----EMGKNMCGIATCASYPV 312
           GYG E+G  YW+++NSWG  WG+ GY KM    E     CGIA  ASYP+
Sbjct: 304 GYGTENGKDYWIVRNSWGNRWGESGYIKMARNIEAPTGKCGIAMEASYPI 353


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 149/305 (48%), Gaps = 59/305 (19%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC---KGL-SYRLGLN--------- 108
           F  F  ++GK Y++  E   RFA F +NL  I + N    +G+ SY  G+N         
Sbjct: 26  FQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAE 85

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++P+KDQ  CGSCW F+  G
Sbjct: 86  FKAMLATQVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWAFAVVG 145

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           S E AY  + GK    SEQQLVDC    N  GC+GG     F YI+ NG L+ E  YPYT
Sbjct: 146 STEGAYALSTGKLTRFSEQQLVDCTTDLN-YGCDGGYLDDTFPYIQTNG-LELESDYPYT 203

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYS 248
           G DG C + S  V  +V   V++    E  L  AVG   PV++A    D  +FY SG+  
Sbjct: 204 GYDGYCSYESSKVVTKVSSYVSVP-ANEQALLEAVGTAGPVAIAINA-DDLQFYFSGIID 261

Query: 249 STKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 308
              C   P  ++H V+AVGY  E+G  YWLIKNSWG +WG+ GYF+   G+N+CG+   A
Sbjct: 262 DKYC--DPEYLDHGVLAVGYDSENGRDYWLIKNSWGADWGESGYFRFLRGQNICGVKEDA 319

Query: 309 SYPVV 313
            YP++
Sbjct: 320 VYPLI 324


>gi|417399134|gb|JAA46597.1| Putative cathepsin l1 [Desmodus rotundus]
          Length = 335

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/220 (45%), Positives = 130/220 (59%), Gaps = 10/220 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS  G+LE    +  GK +SLSEQ LVDC+ +  NQG
Sbjct: 119 VDWRQKGYVTPVKNQGQCGSCWAFSANGALEGQMFRKTGKLVSLSEQNLVDCSHSQGNQG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDEL 219
           CNGGL   AF+Y+K N GLD+EE+YPY G++   C +  E         V+I    E  L
Sbjct: 179 CNGGLMDNAFQYVKDNKGLDSEESYPYLGRESNTCNYRPEYSAANDTGFVDIPQ-HERGL 237

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGV 274
             AV  V P+SVA +     F+FY  G+Y    C  +  D++H V+ VGYG E    D  
Sbjct: 238 MKAVATVGPISVAIDAGHSSFQFYSEGIYYEPNC--SSKDLDHGVLVVGYGSEGAQSDSN 295

Query: 275 PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            +W++KNSWG  WG  GY KM   + N CGIAT ASYP V
Sbjct: 296 KFWIVKNSWGTGWGMSGYVKMARDQSNHCGIATAASYPTV 335


>gi|344275472|ref|XP_003409536.1| PREDICTED: cathepsin S-like isoform 2 [Loxodonta africana]
          Length = 281

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/257 (40%), Positives = 145/257 (56%), Gaps = 14/257 (5%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLG-----LNISPVKDQGHCG 119
           + + Y K Y+   E   R   + KNL  +   N   L + +G     L+++ + D G CG
Sbjct: 31  WKKTYSKQYKEKNEEVARRLIWEKNLKFVMLHN---LEHSMGMHSYDLSMNHLGDMGSCG 87

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGG 178
           +CW FS  G+LEA      GK +SLS Q LVDC+ + ++N+GCNGG  ++AF+YI  N G
Sbjct: 88  ACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSGEKYSNKGCNGGFMTRAFQYIIDNNG 147

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-D 237
           +D+E +YPY   DG C++  +N          +  G+ED L+ AV    PVSV  +    
Sbjct: 148 IDSEASYPYKATDGKCQYDPKNRAATCSKYTELPYGSEDALKEAVANKGPVSVGIDASRP 207

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM 297
            F  YKSGVY    C +   +VNH V+ VGYG  +G  YWL+KNSWG N+G+ GY +M  
Sbjct: 208 SFFLYKSGVYYDPSCTD---NVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGEQGYIRMAR 264

Query: 298 GK-NMCGIATCASYPVV 313
              N CGIA+  SYP +
Sbjct: 265 NSGNHCGIASFPSYPEI 281


>gi|84660244|emb|CAI43319.1| silicatein alpha [Lubomirskia baicalensis]
 gi|85677148|emb|CAI46306.1| silicatein alpha [Lubomirskia baicalensis]
 gi|220675708|emb|CAP69653.1| silcatein [Lubomirskia baicalensis]
          Length = 326

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 137/218 (62%), Gaps = 4/218 (1%)

Query: 98  CKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN 157
            + + +R    ++ VK QG CG+ + F+ TG+LE A   A  K ++LSEQ ++DC+  + 
Sbjct: 111 AESIDWRTKGAVTSVKYQGQCGASYAFAATGALEGASALANDKQVTLSEQNIIDCSVPYG 170

Query: 158 NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAED 217
           N GC+GG    AF+Y+  NGG+DTE +Y + GK   C+++++  G      V+I  G+E 
Sbjct: 171 NHGCSGGDTYTAFKYVIDNGGIDTESSYSFKGKQSSCQYNNKTSGASATGVVSIGYGSES 230

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
           +L  AV  V PV+VA +   + FRFY+SGV+ S+ C +T +  NHA++  GYG  +G  Y
Sbjct: 231 DLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSSTKL--NHAMLVTGYGSYNGKDY 288

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           WL+KNSW +NWGD GY  M   K N CGIA+ A YP++
Sbjct: 289 WLVKNSWSKNWGDSGYILMVRNKYNQCGIASDALYPML 326


>gi|410911058|ref|XP_003969007.1| PREDICTED: counting factor associated protein D-like [Takifugu
           rubripes]
          Length = 549

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 150/304 (49%), Gaps = 51/304 (16%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F  F  ++ + YE  +E  +R   F  NL  I S N  GLSY L LN             
Sbjct: 246 FGHFKEKFQRRYEDDKEHDIRQQAFIHNLRYIHSKNRAGLSYTLALNSLSDRTMSELGTM 305

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F+TTG++E 
Sbjct: 306 RGKKQRKTPNRGLPFPLKLYENVQVPDSLDWRLYGAVTPVKDQAICGSCWSFATTGTIEG 365

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
           A     G    LS+Q L+DC+  F N  C+GG   +++E+I  +GG+   E Y PY G +
Sbjct: 366 ALFLKTGFLQVLSQQILMDCSWGFGNNACDGGEEWRSYEWIMKHGGIALAETYGPYMGMN 425

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSST 250
           G C  +S  +  Q+    N+T G    L+ A+    PV+V+ +     F FY  GVY   
Sbjct: 426 GFCHVNSSELVAQIQSYTNVTSGDAMALKLALFKHGPVAVSIDASHRSFVFYSHGVYYEP 485

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
            CG+T  D++HAV+AVGYG  +G PYWLIKNSW   WG+ GY  M M  N CG+AT A++
Sbjct: 486 ACGSTIDDLDHAVLAVGYGNLNGEPYWLIKNSWSTYWGNDGYILMSMKDNNCGVATDATF 545

Query: 311 PVVA 314
             +A
Sbjct: 546 VTLA 549


>gi|390363592|ref|XP_790934.3| PREDICTED: counting factor associated protein D-like
           [Strongylocentrotus purpuratus]
          Length = 560

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 154/311 (49%), Gaps = 54/311 (17%)

Query: 53  IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN---- 108
           +G   H L F  + ++Y K Y++  E   R   F+KN+ +I S N   L Y L +N    
Sbjct: 245 MGDRFHQL-FDEYKQKYDKTYKTDVEHVQRKGHFTKNVRMIHSINRANLGYVLDINHMAD 303

Query: 109 ---------------------------------------------ISPVKDQGHCGSCWT 123
                                                        +SPVKDQ  CGSCW+
Sbjct: 304 QSHQELKRMRGRLRQTRPNNGLPYDGSDISDDAVPDHIDWNVRGAVSPVKDQAVCGSCWS 363

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           F +  ++E A     GK + LS+Q L+DC  A  N GC+GG   + +E++  NGG+  EE
Sbjct: 364 FGSAETIEGAVFMQSGKRVRLSQQMLMDCTWAAGNNGCDGGEEWRVYEWLMKNGGIPLEE 423

Query: 184 AY-PYTGKDGVCKFSSENVGVQVLDS-VNITLGAEDELQHAVGLVRPVSVAFE-VVDGFR 240
            Y PY G++G+C +      V  +    N+T G + +L+ A+    P++V  +  V  F 
Sbjct: 424 TYGPYLGQNGMCHYGKSTPAVASIKKYYNVTSGNQKDLKKALATKGPIAVGIDAAVPSFS 483

Query: 241 FYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK 299
           FY  G Y    CGNT  D++HAV+AVGYG +  G  YWLIKNSW  +WG++GY  + M  
Sbjct: 484 FYSYGTYYDASCGNTVDDLDHAVLAVGYGTDSSGQDYWLIKNSWSTHWGNNGYVAISMKD 543

Query: 300 NMCGIATCASY 310
           N CG+AT A+Y
Sbjct: 544 NNCGVATAATY 554


>gi|356515086|ref|XP_003526232.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 156/307 (50%), Gaps = 63/307 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRS-TNCKGLSYRLGLN-------------- 108
           ++  RYGK+Y+  +E + RF  F +N++ I +  N    SY+LG+N              
Sbjct: 41  QWMTRYGKVYKDPQEREKRFRVFKENVNYIEAFNNAANKSYKLGINQFADLTNKEFIAPR 100

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++P+KDQG CG CW FS   + E 
Sbjct: 101 NGFKGHMCSSIIRTTTFKFENVTATPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEG 160

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            +  + GK ISLSEQ+LVDC     +QGC GGL   AF++I  N GL+TE  YPY G DG
Sbjct: 161 IHALSAGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEANYPYKGVDG 220

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  +        +    ++    E  LQ AV   +PVSVA +     F+FYKSGV++ +
Sbjct: 221 KCNANEAAKNAATITGYEDVPANNEMALQKAVA-NQPVSVAIDASGSDFQFYKSGVFTGS 279

Query: 251 KCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIA 305
            CG    +++H V AVGYGV +DG  YWL+KNSWG  WG+ GY +M+ G    + +CGIA
Sbjct: 280 -CGT---ELDHGVTAVGYGVSDDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEEGLCGIA 335

Query: 306 TCASYPV 312
             ASYP 
Sbjct: 336 MQASYPT 342


>gi|148283737|gb|ABN50361.2| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/255 (39%), Positives = 142/255 (55%), Gaps = 10/255 (3%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKN-LDLIRSTNCKGLSYRLGLNISPVKDQGHC 118
           L+F  F  +Y        E+  R   +  N L +  S + +   Y     ++ VK+QG C
Sbjct: 75  LTFEEFKAKYLIEIPRSSELLSRGIPYKANKLAVPESIDWRDYYY-----VTEVKNQGQC 129

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FSTTG++E  + +      S SEQQLV+C + F N GC GG    A+EY+K+N G
Sbjct: 130 GSCWAFSTTGAVEGQFRKNERASASFSEQQLVNCTRDFGNYGCGGGYVENAYEYLKHN-G 188

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG 238
           L+TE  YPY   +G C++       +V     +  G E EL++ VG   P +VA +    
Sbjct: 189 LETESYYPYQAVEGPCQYDGRLAYAKVTGYYTVHSGDEIELKNLVGTEGPAAVALDADSD 248

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y+SG+Y S  C   P  + HAV+AVGYG +DG  YW++KNSWG  WG+ GY +    
Sbjct: 249 FMMYQSGIYQSQTC--LPDRLTHAVLAVGYGSQDGTDYWIVKNSWGTWWGEDGYIRFARN 306

Query: 299 K-NMCGIATCASYPV 312
           + NMCGIA+ AS P+
Sbjct: 307 RGNMCGIASLASVPI 321


>gi|157093563|gb|ABV22436.1| cysteine proteinase [Oxyrrhis marina]
          Length = 329

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 157/310 (50%), Gaps = 64/310 (20%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           +  F  ++G+ Y   EE   R   F++N+ LI   N KG +Y LG+N             
Sbjct: 19  WEEFKAKFGESYNGEEEEAERKGVFAQNVQLINEENSKGHTYTLGVNQFADLTVEEFSKT 78

Query: 109 --------------------------------------ISPVKDQGHCGSCWTFSTTGSL 130
                                                 ++PVK+QG CGSCW+FSTTGSL
Sbjct: 79  YMGFKKPAQKYGDAAYLGRHVYNGEALPTSVDWSSQGAVTPVKNQGQCGSCWSFSTTGSL 138

Query: 131 EAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 190
           E A   + GK +SLSEQQ VDCA  + NQGCNGGL   AF+Y + N  L TE++YPY G 
Sbjct: 139 EGANEISTGKLVSLSEQQFVDCAGTYGNQGCNGGLMDSAFKYAEAN-ALCTEQSYPYKGT 197

Query: 191 DGVCKFSSENVGV---QVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGV 246
           DG C+ SS + G+    V    +++  +E ++  AV   +PVS+A E     F+ Y  GV
Sbjct: 198 DGSCQASSCSTGLAKGSVSGYKDVSSDSEQDMMSAVAQ-QPVSIAIEADKSVFQLYSGGV 256

Query: 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK---NMCG 303
            +   CG +   ++H V+AVGYG   G  YW +KNSWG  WG  GY  ++ GK     CG
Sbjct: 257 LTGA-CGAS---LDHGVLAVGYGTLSGTDYWKVKNSWGSTWGMSGYVLLQRGKGGSGECG 312

Query: 304 IATCASYPVV 313
           + +  SYP V
Sbjct: 313 LLSEPSYPQV 322


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/275 (37%), Positives = 154/275 (56%), Gaps = 25/275 (9%)

Query: 54  GQARHALSFARFA----RRYGKIYESVEE-------MKLRFATFSKNLDLIRSTNCKGLS 102
           G+ ++ L   +FA    + +  +Y  + +        K   A  SK  +  R  +   + 
Sbjct: 97  GKKKYVLGTNQFADLTSKEFAAMYTGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQVD 156

Query: 103 YRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCN 162
           +R    ++PVK+QG CG CW FS  G++E       G  +SLSEQQ++DC ++  NQGCN
Sbjct: 157 WRQQGAVTPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCN 216

Query: 163 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHA 222
           GG    AF+Y+  NGG+ TE+AYPY+   G C+       +      ++  G E+ L +A
Sbjct: 217 GGYMDNAFQYVINNGGVTTEDAYPYSAVQGTCQNVQPAATISGFQ--DLPSGDENALANA 274

Query: 223 VGLVRPVSVAFEVVDG----FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYW 277
           V   +PVSV    VDG    F+FY+ G+Y    CG    D+NHAV A+GYG +D G  YW
Sbjct: 275 VA-NQPVSVG---VDGGSSPFQFYQGGIYDGDGCGT---DMNHAVTAIGYGADDQGTQYW 327

Query: 278 LIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
           ++KNSWG  WG++G+ +++MG   CGI+T ASYP 
Sbjct: 328 ILKNSWGTGWGENGFMQLQMGVGACGISTMASYPT 362


>gi|226529105|ref|NP_001150196.1| cysteine protease 1 precursor [Zea mays]
 gi|194701798|gb|ACF84983.1| unknown [Zea mays]
 gi|194704800|gb|ACF86484.1| unknown [Zea mays]
 gi|195637480|gb|ACG38208.1| cysteine protease 1 precursor [Zea mays]
 gi|413919895|gb|AFW59827.1| cysteine protease 1 [Zea mays]
          Length = 470

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 161/332 (48%), Gaps = 67/332 (20%)

Query: 41  GLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG 100
           G R  E +  +V  +A + L  A   R Y  + E   E   RF  F  NL  + + N + 
Sbjct: 42  GARGLERTEPEV--RAMYDLWLAEHGRAYNALGEGEGERDRRFLVFWDNLRFVDAHNERA 99

Query: 101 --LSYRLGLN-------------------------------------------------- 108
               +RLG+N                                                  
Sbjct: 100 GARGFRLGMNQFADLTNDEFRAAYLGAMVPAARRGAVVGERYRHDGAAEELPESVDWREK 159

Query: 109 --ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLP 166
             ++PVK+QG CGSCW FS   S+E+      G+ ++LSEQ+LV+C+    N GCNGGL 
Sbjct: 160 GAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLM 219

Query: 167 SQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGL 225
             AF++I  NGG+DTE+ YPY   DG C  + +N  V  +D   ++    E  LQ AV  
Sbjct: 220 DAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAH 279

Query: 226 VRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWG 284
            +PVSVA E     F+ YKSGV+S    G+   +++H VVAVGYG E+G  YW+++NSWG
Sbjct: 280 -QPVSVAIEAGGREFQLYKSGVFS----GSCTTNLDHGVVAVGYGAENGKDYWIVRNSWG 334

Query: 285 ENWGDHGYFKMEMGKNM----CGIATCASYPV 312
             WG+ GY +ME   N     CGIA  ASYP 
Sbjct: 335 PKWGEAGYIRMERNVNASTGKCGIAMMASYPT 366


>gi|66816665|ref|XP_642342.1| hypothetical protein DDB_G0278401 [Dictyostelium discoideum AX4]
 gi|60470393|gb|EAL68373.1| hypothetical protein DDB_G0278401 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/328 (35%), Positives = 158/328 (48%), Gaps = 74/328 (22%)

Query: 51  QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-- 108
           Q + ++++  +F  +     K Y S  E   R+  F  N D I   N KG    LGLN  
Sbjct: 19  QELSESQYRDAFTDWMISNQKSYSS-SEFITRYNIFKTNFDYIEEWNSKGSETVLGLNKM 77

Query: 109 ----------------------------------------------ISPVKDQGHCGSCW 122
                                                         ++ VK+Q  C  CW
Sbjct: 78  ADITNEEYRSLYLGKPFDASSLIGTKEEILFSNKFSSTVDWRKKGAVTHVKNQQSCSGCW 137

Query: 123 TFSTTGSLEAAYHQAFGKG----ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           +FS TG+ E A H+    G    +SLSEQ L+DC+  F N GCNGG+ + AFEYI  NGG
Sbjct: 138 SFSATGATEGA-HKLANNGTNELVSLSEQNLIDCSTPFGNTGCNGGVITYAFEYIISNGG 196

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-D 237
           +DTE++YP+ G DG C++ SEN G  +   VN+T G+E  L+ AV  V PV+ + +    
Sbjct: 197 IDTEKSYPFEGTDGTCRYKSENSGATISSYVNVTFGSESSLESAVN-VNPVACSIDASHS 255

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-----------YWLIKNSWGEN 286
            F FYKSG+Y    C  T +D  H V+ VGYG E+              YW+ KNSWG N
Sbjct: 256 SFLFYKSGIYFEPACSRTNLD--HGVLVVGYGTENSQSQDSSSEPNHSNYWIAKNSWGIN 313

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
               GY  M   + NMCGI+T AS+P+V
Sbjct: 314 ----GYILMSKDRDNMCGISTLASFPIV 337


>gi|340370388|ref|XP_003383728.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 398

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 125/215 (58%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+KDQG CGSCW FS  GSLE  +    G  +SLSEQQLVDC  +  N G
Sbjct: 187 VDWREKGAVTPIKDQGQCGSCWAFSAIGSLEGQHFINTGNLVSLSEQQLVDC--SLKNDG 244

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG+ S AF+YI+   G ++E  YPYT K+G C++       +V     +  G ED L 
Sbjct: 245 CNGGMLSTAFKYIESVAGEESETDYPYTAKNGTCQYDPSKAVAKVTGYTALPSGDEDSLN 304

Query: 221 HAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV    P+SV  +     F+ Y  GVY    C    +D  H V+ VGYG ED   YWL+
Sbjct: 305 DAVTSKGPISVCIDASHKSFQLYSEGVYYEKSCSYFLLD--HCVLVVGYGTEDTADYWLV 362

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSWG +WG  GY +M    KN CGIAT A+YP+V
Sbjct: 363 KNSWGTSWGMKGYIRMSRNRKNNCGIATNAAYPLV 397



 Score = 43.9 bits (102), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 59  ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLNISPVKDQGH 117
            ++   FA      +  ++++    A  + N  L+   N    + +R    ++PV  QG 
Sbjct: 72  TVAMNEFADLDADAFSKLKKIPSHPAQANNNKVLLTGGNVPNSIDWRKKGAVTPVSSQGQ 131

Query: 118 CGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN 157
           CG  W +   GS+E+ Y    G  + LS QQ++DCA   N
Sbjct: 132 CG-VWPWPIVGSVESQYFIKTGTLVPLSVQQILDCANITN 170


>gi|327239614|gb|AEA39651.1| cathepsin H [Epinephelus coioides]
          Length = 261

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/168 (57%), Positives = 112/168 (66%)

Query: 104 RLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNG 163
           + G  ++ VK+QG CGSCWTFSTTG LE+      GK + LSEQQLVDCAQAFNN GCNG
Sbjct: 94  KKGNYVTDVKNQGGCGSCWTFSTTGCLESVIAINKGKLVPLSEQQLVDCAQAFNNHGCNG 153

Query: 164 GLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV 223
           GLPSQAFEYI YN GL TE+ YPYT  +G C ++ E     V + VNIT   E  +  AV
Sbjct: 154 GLPSQAFEYILYNKGLMTEDDYPYTSFEGTCVYNPERAAAFVNEVVNITAYDEMGMVDAV 213

Query: 224 GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 271
               PVS+AFEV   F  Y  GVY+ST+C      VNHAV+AVGYG E
Sbjct: 214 ATRNPVSLAFEVTSDFMHYSQGVYTSTECHQNTNKVNHAVLAVGYGQE 261


>gi|313103779|pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A
 gi|313103780|pdb|3KSE|B Chain B, Unreduced Cathepsin L In Complex With Stefin A
 gi|313103781|pdb|3KSE|C Chain C, Unreduced Cathepsin L In Complex With Stefin A
          Length = 220

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGS W FS TG+LE    +  G+ ISLSEQ LVDC+    N
Sbjct: 3   RSVDWREKGYVTPVKNQGQCGSXWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 62

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  
Sbjct: 63  EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKA 121

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D 
Sbjct: 122 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDD 179

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
             YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct: 180 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|116787404|gb|ABK24495.1| unknown [Picea sitchensis]
 gi|224286306|gb|ACN40861.1| unknown [Picea sitchensis]
          Length = 452

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 169/353 (47%), Gaps = 79/353 (22%)

Query: 18  AAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVE 77
           A A SAS + F       ++SS  LR+ + +++++         +  +   + + Y  ++
Sbjct: 14  AMAGSASRADF------SIISSKDLRE-DDAIMEL---------YELWLAEHKRAYNGLD 57

Query: 78  EMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------------------------- 108
           E + RF+ F  N   I   N    SY+LGLN                             
Sbjct: 58  EKQKRFSVFKDNFLYIHEHNQGNRSYKLGLNQFADLSHEEFKATYLGAKLDTKKRLSRPP 117

Query: 109 -----------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLS 145
                                  ++ VKDQG CGSCW FST  ++E       G  ISLS
Sbjct: 118 SRRYQYSDGEDLPESIDWREKGAVTSVKDQGSCGSCWAFSTVAAVEGINQIVTGDLISLS 177

Query: 146 EQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQV 205
           EQ+LVDC  ++N QGCNGGL   AFE+I  NGGLD+EE YPYT  DG C    +N  V  
Sbjct: 178 EQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDSYRKNAHVVT 236

Query: 206 LDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVV 264
           +D        +++        +P+SVA E     F+FY SGV++ST CG     ++H V 
Sbjct: 237 IDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYDSGVFTST-CGTQ---LDHGVT 292

Query: 265 AVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
            VGYG E G  YW +KNSWG++WG+ G+ +++         MCGIA  ASYPV
Sbjct: 293 LVGYGSESGTDYWTVKNSWGKSWGEEGFIRLQRNIEVASTGMCGIAMEASYPV 345


>gi|225707912|gb|ACO09802.1| Cathepsin K precursor [Osmerus mordax]
          Length = 331

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 128/218 (58%), Gaps = 7/218 (3%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK + LS Q LVDC     N
Sbjct: 118 KSIDYRRKGMVTPVKNQGSCGSCWAFSSVGALEGQLMKTTGKLVDLSPQNLVDCVTE--N 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC GG  + AF Y++ N G+D+E AYPY G+D  C ++   +         I  G E  
Sbjct: 176 NGCGGGYMTNAFNYVRDNQGIDSEAAYPYIGQDETCAYNVSGMTASCRGYKEIPEGNERA 235

Query: 219 LQHAVGLVRPVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPY 276
           L  AV  V PVSV  +  +  F+FY+ GVY    C     D+NHAV+AVGYGV   G  Y
Sbjct: 236 LTVAVAKVGPVSVGIDATLSTFQFYQKGVYYDRNCNKD--DINHAVLAVGYGVTPKGKKY 293

Query: 277 WLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           W++KNSW E+WG+ GY  M   + N+CGIA  ASYP++
Sbjct: 294 WIVKNSWSESWGNKGYILMARNRGNLCGIANLASYPIM 331


>gi|356533293|ref|XP_003535200.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 466

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 134/219 (61%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+KDQG CGSCW FST G++E       G   SLSEQ+LVDC + +N  G
Sbjct: 143 VDWREKGAVTPIKDQGQCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDRGYN-MG 201

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AFE+I  NGG+DTEE YPY  KD  C  + +N  V  +D   ++    E  L
Sbjct: 202 CNGGLMDYAFEFIVQNGGIDTEEDYPYHAKDNTCDPNRKNARVVTIDGYEDVPTNDEKSL 261

Query: 220 QHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
             AV   +PVSVA E     F+ Y+SGV++  +CG    +++H VVAVGYG E+G  YWL
Sbjct: 262 MKAVA-NQPVSVAIEAGGMEFQLYQSGVFTG-RCG---TNLDHGVVAVGYGTENGTDYWL 316

Query: 279 IKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           ++NSWG  WG++GY K+E          CGIA  ASYP+
Sbjct: 317 VRNSWGSAWGENGYIKLERNVQNTETGKCGIAIEASYPI 355


>gi|356577811|ref|XP_003557016.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/307 (36%), Positives = 154/307 (50%), Gaps = 63/307 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRS-TNCKGLSYRLGLN-------------- 108
           ++  RYGK+Y+  +E + RF  F +N++ I +  N     Y+L +N              
Sbjct: 41  QWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTNEEFIAPR 100

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++P+KDQG CG CW FS   + E 
Sbjct: 101 NRFKGHMCSSIIRTTTFKYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEG 160

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            +    GK ISLSEQ+LVDC     +QGC GGL   AF+++  N GL+TE  YPY G DG
Sbjct: 161 IHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDG 220

Query: 193 VCKFS-SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  + + N    +    ++    E  LQ AV   +PVSVA +     F+FYKSGV++ +
Sbjct: 221 KCNVNEAANDAATITGYEDVPANNEKALQKAVA-NQPVSVAIDASGSDFQFYKSGVFTGS 279

Query: 251 KCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIA 305
            CG    +++H V AVGYGV  DG  YWL+KNSWG  WG+ GY +M+ G N    +CGIA
Sbjct: 280 -CGT---ELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQRGVNSEEGLCGIA 335

Query: 306 TCASYPV 312
             ASYP 
Sbjct: 336 MQASYPT 342


>gi|226821419|gb|ACO82385.1| cathepsin K [Lutjanus argentimaculatus]
          Length = 330

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/232 (43%), Positives = 137/232 (59%), Gaps = 7/232 (3%)

Query: 85  TFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISL 144
           +F+  LD   +   K + YR    ++ VK+QG CGSCW FS+ G+LE    +  G+ + L
Sbjct: 103 SFTMALDDDVNRLPKYIDYRKKGMVTSVKNQGSCGSCWAFSSAGALEGQLAKKTGQLVDL 162

Query: 145 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQ 204
           S Q LVDC     N GC GG  ++AF+Y+  NGG+D+EEAYPY G+D  C++++  +  Q
Sbjct: 163 SPQNLVDCVT--ENDGCGGGYMTKAFQYVADNGGIDSEEAYPYIGEDQPCRYNATGMAAQ 220

Query: 205 VLDSVNITLGAEDELQHAVGLVRPVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAV 263
                 I  G E  L  A+    PVSV  +  +  F+FY  GVY    C     D+NHAV
Sbjct: 221 CKGYKEIPEGNEHALAVALFKAGPVSVGIDATLSSFQFYSKGVYYDPSCNKE--DINHAV 278

Query: 264 VAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +AVGYGV   G  YW++KNSWGE+WG  GY  M   + N+CGIA  ASYP++
Sbjct: 279 LAVGYGVTGKGKKYWIVKNSWGESWGKGGYILMARNRGNLCGIANLASYPIM 330


>gi|357483847|ref|XP_003612210.1| Cysteine proteinase [Medicago truncatula]
 gi|355513545|gb|AES95168.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 156/308 (50%), Gaps = 64/308 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC--KGLSYRLGLN------------- 108
           R+   YGK+Y+  +E + RF  F++N+  I + N      SY+LG+N             
Sbjct: 41  RWMNHYGKVYKDHQEREKRFKIFTENMKYIEAFNNGDNNESYKLGINQFADLTNEEFVAS 100

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                ++PVK+QG CG CW FS   + E
Sbjct: 101 RNKFKGHMCSSIIRTTTFKYENVSAIPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATE 160

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
             +  + GK +SLSEQ+LVDC     +QGC GGL   AF++I  N GL+TE  YPY G D
Sbjct: 161 GIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVD 220

Query: 192 GVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSS 249
           G C  +  ++    +    ++    E  LQ AV   +P+SVA +     F+FYKSGV++ 
Sbjct: 221 GTCNANKASIQATTITGYEDVPANNEQALQKAVA-NQPISVAIDASGSDFQFYKSGVFTG 279

Query: 250 TKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGI 304
           + CG    +++H V AVGYGV  DG  YWL+KNSWG +WG+ GY  M+ G    + +CGI
Sbjct: 280 S-CG---TELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGVEAAEGLCGI 335

Query: 305 ATCASYPV 312
           A  ASYP 
Sbjct: 336 AMQASYPT 343


>gi|432117576|gb|ELK37815.1| Cathepsin L1 [Myotis davidii]
          Length = 299

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/232 (44%), Positives = 131/232 (56%), Gaps = 30/232 (12%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVKDQG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  N+GC+GGL   
Sbjct: 71  VTPVKDQGGCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCSGGLMDN 130

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+K N GLDTEE+YPY G D  CK+  E         V+I    E  L  AV  V P
Sbjct: 131 AFQYVKDNEGLDTEESYPYYGTDDTCKYKPEFSAANDTGFVDIH-KDERSLMKAVASVGP 189

Query: 229 VSVAFEV-VDGFRFYKS---------------------GVYSSTKCGNTPMDVNHAVVAV 266
           +SVA +  ++ F+FY+                      G+Y    C +   D+NH V+ V
Sbjct: 190 ISVALDASLESFQFYEKGKVTVSSYLEIFTPAMTSVFLGIYYDPDCSSE--DLNHGVLVV 247

Query: 267 GYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           GYG E    D   YW++KNSWG  WG  GY KM     N CGIA+ ASYP V
Sbjct: 248 GYGFEGVEMDNNKYWIVKNSWGTKWGMDGYIKMAKDLDNHCGIASMASYPTV 299


>gi|147790682|emb|CAN61026.1| hypothetical protein VITISV_001146 [Vitis vinifera]
          Length = 469

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 153/304 (50%), Gaps = 65/304 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           ++GK Y ++ E + RF  F  NL  I   N +  +Y++GLN                   
Sbjct: 59  KHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRSMYLGTRT 118

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            +  VKDQG CGSCW FST  ++E    
Sbjct: 119 AAKRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGINK 178

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 195
              G  ISLSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+D+EE YPY   DG C 
Sbjct: 179 IVTGGLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGRCD 237

Query: 196 FSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCG 253
              +N  V  +D   ++    E  L+ AV   +PVSVA E     F+ Y+SG+++  +CG
Sbjct: 238 QYRKNAXVVTIDGYEDVPENDEKSLEKAVA-NQPVSVAIEAGGREFQLYQSGIFTG-RCG 295

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-----GKNMCGIATCA 308
                ++H V AVGYG E+GV YW++KNSWG +WG+ GY +ME          CGIA  A
Sbjct: 296 TA---LDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGKCGIAMEA 352

Query: 309 SYPV 312
           SYP+
Sbjct: 353 SYPI 356


>gi|374713649|gb|AEZ65082.1| cysteine protease [Carica papaya]
          Length = 471

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/219 (46%), Positives = 136/219 (62%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VKDQG CGSCW FST GS+E       G  ISLSEQ+LVDC +A+N QG
Sbjct: 146 VDWREKGAVTEVKDQGQCGSCWAFSTVGSVEGINQIVTGDLISLSEQELVDCDKAYN-QG 204

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AFE+I  NGG+D+E  YPY   D +C  + +N  V  +D   ++    E+ L
Sbjct: 205 CNGGLMDYAFEFIIKNGGIDSEADYPYRASDNMCDSNRKNAHVVTIDGYEDVPENDEESL 264

Query: 220 QHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + AV   +PVSVA E     F+ Y+SGV++  +CG    +++H VVAVGYG E+G+ YW+
Sbjct: 265 KKAVA-NQPVSVAIEAGGREFQLYQSGVFTG-RCGT---NLDHGVVAVGYGTENGIDYWI 319

Query: 279 IKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           ++NSWG  WG+ GY +ME          CGIA  ASYP 
Sbjct: 320 VRNSWGPKWGESGYIRMERNVASTDTGKCGIAMEASYPT 358


>gi|144905104|dbj|BAF56427.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 167/334 (50%), Gaps = 63/334 (18%)

Query: 36  LVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRS 95
           LV   GL  F+ S   +   + H     ++  RYGK+Y+ ++E + RF  F +N+  I +
Sbjct: 14  LVLCLGLWAFQVSSRTLQDASMHE-RHEQWMARYGKVYKDLQEKEKRFNIFQENVKYIEA 72

Query: 96  TNCKG-LSYRLGLN---------------------------------------------- 108
           +N  G   Y+LG+N                                              
Sbjct: 73  SNNAGNKPYKLGVNQFTDLTNKEFIATRNKFKGHMSSSITRTTTFKYENVTAPSTVDWRQ 132

Query: 109 ---ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++PVK+QG CG CW FS   + E  +  + G  +SLSEQ+LVDC  +  +QGC GGL
Sbjct: 133 EGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQELVDCDTSGADQGCQGGL 192

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVG 224
              AF++I  NGGL+TE  YPY G DG C  + E   V  +    ++    E  LQ AV 
Sbjct: 193 MDDAFKFIIQNGGLNTEAQYPYQGVDGTCNTNEEVTHVATITGYEDVPSNNEQALQQAVA 252

Query: 225 LVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNS 282
             +P+SVA +     F+ Y+SGV++ + CG     ++H V  VGYGV +DG  YWL+KNS
Sbjct: 253 -NQPISVAIDASGSDFQNYQSGVFTGS-CG---TQLDHGVAVVGYGVSDDGTKYWLVKNS 307

Query: 283 WGENWGDHGYFKM----EMGKNMCGIATCASYPV 312
           WGE+WG+ GY +M    E  + +CGIA   SYP 
Sbjct: 308 WGEDWGEEGYIRMQRDVEAPEGLCGIAMQPSYPT 341


>gi|443722452|gb|ELU11310.1| hypothetical protein CAPTEDRAFT_132308 [Capitella teleta]
          Length = 235

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/217 (47%), Positives = 139/217 (64%), Gaps = 3/217 (1%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS+TGSLE    +  G+  S+SEQ LVDC++   N
Sbjct: 20  KTVDWREKGYVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISEQNLVDCSRDEGN 79

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
            GC+GGL   AF YIK N G+D+E++YPY   DG C++   +        V+I  G E  
Sbjct: 80  MGCSGGLMDNAFTYIKKNMGIDSEKSYPYEAVDGECRYKKSDSVTTDSGFVDIPHGDETA 139

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 277
           L+ AV  V PVSVA +     F+FYK+GVY+   C +T +D +  +V VGYGVE+G  YW
Sbjct: 140 LRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANCSSTQLD-HGVLVVVGYGVENGQDYW 198

Query: 278 LIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           L+KNSWG +WG+ GY KM     N CGIA+ ASYP++
Sbjct: 199 LVKNSWGASWGEAGYIKMARNHGNQCGIASQASYPLL 235


>gi|94480716|emb|CAI91577.1| cathepsin L [Aphrocallistes vastus]
          Length = 329

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/206 (48%), Positives = 131/206 (63%), Gaps = 8/206 (3%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK+QG CGSCW+FS TGSLE  Y    GK +S SEQ+LVDC+ +  N GC GGL   
Sbjct: 127 VTPVKNQGQCGSCWSFSATGSLEGQYAIKSGKLVSFSEQELVDCSTSLGNHGCQGGLMDY 186

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE--DELQHAVGLV 226
           AF+Y + N   + E  Y YT K+G CK++++ +GV   DS    + +E  D L+ AV   
Sbjct: 187 AFKYWETNLA-EKESDYTYTAKNGKCKYNAQ-LGV-TKDSSFTDIPSENCDALKEAVANK 243

Query: 227 RPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGE 285
            P++VA +     F+ Y SG+Y+   C  T +D  H V+ VGYG ++GV YWLIKNSWG 
Sbjct: 244 GPIAVAMDASHTSFQMYHSGIYTPFLCSKTKLD--HGVLVVGYGTDNGVDYWLIKNSWGM 301

Query: 286 NWGDHGYFKMEMGKNMCGIATCASYP 311
            WG  GYFK+EM  + CGI T ASYP
Sbjct: 302 AWGMDGYFKIEMKSDKCGICTQASYP 327


>gi|213623956|gb|AAI70449.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 129/215 (60%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++P+++QG CGSCW FS+ G+LE    +  GK + LS Q LVDC +   N G
Sbjct: 121 IDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVK--KNDG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY++ N G+D+E+AYPY G+D  C ++             +  G E  L+
Sbjct: 179 CGGGYMTNAFEYVRDNKGIDSEKAYPYVGEDQECMYNVSGRAAACKGYKEVQEGNEKALK 238

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV LV PVSV  +  +  F+FY  GVY    C  +  D+NHAV+AVGYG +    YW++
Sbjct: 239 KAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDC--SAEDINHAVLAVGYGTQKKAKYWIV 296

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWGE WGD GY  M   K N CGIA  ASYPV+
Sbjct: 297 KNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331


>gi|256535829|gb|ACU82389.1| cathepsin L 1 [Pheronema raphanus]
          Length = 328

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 151/299 (50%), Gaps = 60/299 (20%)

Query: 69  YGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------------- 108
           + K+Y ++ E   R   +  NL      N +GLSY LG N                    
Sbjct: 36  HKKVYYTLIEENFRRLIWEDNLSTFNEMNSRGLSYTLGTNEFADMTSKEFVEIMNGYKPE 95

Query: 109 -------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQA 137
                                          ++PVK+QG CGSCW FS+TGSLE  Y   
Sbjct: 96  LRIDKLEDVNEVKNYSSIKLSDSVDWRSKGAVTPVKNQGQCGSCWAFSSTGSLEGQYFIN 155

Query: 138 FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK-YNGGLDTEEAYPYTGKDGVCKF 196
             K +S SE +LVDC++ + N GC GGL   AF Y + Y   L+++  YPY  KDG C++
Sbjct: 156 NDKLLSFSESELVDCSRRYGNNGCKGGLMDNAFRYWEVYKEELESD--YPYVAKDGPCRY 213

Query: 197 SSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGN 254
            S++ GV  + S  N+   ++  LQ AV  + P+SVA +     F+ Y SGVYS ++C  
Sbjct: 214 -SQDKGVTTISSYKNVPHFSQISLQDAVRTIGPISVAMDASHKSFQLYHSGVYSESECSQ 272

Query: 255 TPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           T +D  H V+ VGYG     P+WL+KNSWG  WG  GYF++ M  NMCG+ T  SYP++
Sbjct: 273 TKLD--HGVLVVGYGTS-SEPFWLVKNSWGAGWGMDGYFEIAMRNNMCGLETEPSYPIL 328


>gi|225458701|ref|XP_002284973.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 467

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 153/304 (50%), Gaps = 65/304 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------- 108
           ++GK Y ++ E + RF  F  NL  I   N +  +Y++GLN                   
Sbjct: 57  KHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRSMYLGTRT 116

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            +  VKDQG CGSCW FST  ++E    
Sbjct: 117 AAKRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAAVEGINK 176

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 195
              G  ISLSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+D+EE YPY   DG C 
Sbjct: 177 IVTGGLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIINNGGIDSEEDYPYKASDGRCD 235

Query: 196 FSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCG 253
              +N  V  +D   ++    E  L+ AV   +PVSVA E     F+ Y+SG+++  +CG
Sbjct: 236 QYRKNAKVVTIDGYEDVPENDEKSLEKAVA-NQPVSVAIEAGGREFQLYQSGIFTG-RCG 293

Query: 254 NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-----GKNMCGIATCA 308
                ++H V AVGYG E+GV YW++KNSWG +WG+ GY +ME          CGIA  A
Sbjct: 294 TA---LDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGKCGIAMEA 350

Query: 309 SYPV 312
           SYP+
Sbjct: 351 SYPI 354


>gi|334332716|ref|XP_001367365.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 335

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/313 (37%), Positives = 164/313 (52%), Gaps = 67/313 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------- 108
           + ++  ++GK YE+ E+  LR A + KNL +I   N +      S++LG+N         
Sbjct: 29  WHQWKAQHGKSYEANED-SLRRAIWEKNLKMIERHNQEYRAGKQSFQLGMNKFGDMTTEE 87

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++PVK+QG C SCW FS  
Sbjct: 88  FQEAINFYNSSASQRRTKRYLHREPLLAQLPESVDWREEGYVTPVKNQGQCLSCWAFSAV 147

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
           G++E  + +  G+ +SLS Q LVDC  + +   C+GG   +AF+Y++ NGG+DTEE YPY
Sbjct: 148 GAIEGQWFRKTGELVSLSIQNLVDCTTSDSISSCHGGFMDRAFQYVQDNGGIDTEECYPY 207

Query: 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG----FRFYK 243
            G+   CK+  E  G  V+  V+I    E  L  AV  V P+SVA   +DG    F+FY+
Sbjct: 208 VGEVNECKYQPECSGANVVGFVDIPSMDERALMEAVATVGPISVA---IDGGNPSFKFYE 264

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGK-N 300
           SGVY   +C ++ +  NHA + VGYG E  DG  YW++KNSWGE WG++GY  M   + N
Sbjct: 265 SGVYYDPQCSSSQL--NHAGLVVGYGSEGIDGRKYWIVKNSWGELWGNNGYILMAKDEDN 322

Query: 301 MCGIATCASYPVV 313
            CGIAT ASYP V
Sbjct: 323 HCGIATEASYPEV 335


>gi|162463464|ref|NP_001104879.1| cysteine proteinase Mir3 precursor [Zea mays]
 gi|2425066|gb|AAB88263.1| cysteine proteinase Mir3 [Zea mays]
          Length = 480

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/311 (36%), Positives = 155/311 (49%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +G+ Y +V   + R+  F  NL  I + N        S+RLGLN         
Sbjct: 44  YAEWMAAHGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDE 103

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    ++ VKDQG CG+CW FST 
Sbjct: 104 YPATYLGARTRPQRDRKLGARYHAADNEDLPESVDWRAKGAVAEVKDQGSCGTCWAFSTI 163

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  ISLSEQ+LVDC  ++N QGCNGGL   AFE+I  NGG+DTE+ YPY
Sbjct: 164 AAVEGINQIVTGDLISLSEQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGIDTEKDYPY 222

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
            G DG C  + +N  V  +DS  ++    E  LQ AV   +PVSVA E     F+ Y SG
Sbjct: 223 KGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVA-NQPVSVAIEAAGTAFQLYSSG 281

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++ + CG     ++H V AVGYG E+G  YW++KNSWG +WG+ GY +ME         
Sbjct: 282 IFTGS-CGTR---LDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGK 337

Query: 302 CGIATCASYPV 312
           CGIA   SYP+
Sbjct: 338 CGIAVEPSYPL 348


>gi|163914459|ref|NP_001106314.1| cathepsin K precursor [Xenopus laevis]
 gi|159155477|gb|AAI54985.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 129/215 (60%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++P+++QG CGSCW FS+ G+LE    +  GK + LS Q LVDC +   N G
Sbjct: 121 IDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVK--KNDG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY++ N G+D+E+AYPY G+D  C ++             +  G E  L+
Sbjct: 179 CGGGYMTNAFEYVRDNKGIDSEKAYPYVGEDQECMYNVSGRAAACKGYKEVQEGNEKALK 238

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV LV PVSV  +  +  F+FY  GVY    C  +  D+NHAV+AVGYG +    YW++
Sbjct: 239 KAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDC--SAEDINHAVLAVGYGTQKKAKYWIV 296

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWGE WGD GY  M   K N CGIA  ASYPV+
Sbjct: 297 KNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331


>gi|114559420|ref|XP_001171183.1| PREDICTED: cathepsin S isoform 1 [Pan troglodytes]
 gi|397492868|ref|XP_003817342.1| PREDICTED: cathepsin S isoform 2 [Pan paniscus]
          Length = 281

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/256 (41%), Positives = 145/256 (56%), Gaps = 12/256 (4%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNISPVKDQGHCGS 120
           + + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   + D G CG+
Sbjct: 31  WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMN--HLGDMGSCGA 88

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGL 179
           CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+
Sbjct: 89  CWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGI 148

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-G 238
           D++ +YPY   D  C++ S+           +  G ED L+ AV    PVSV  + +   
Sbjct: 149 DSDASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDALHPS 208

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298
           F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+G+ GY +M   
Sbjct: 209 FFLYRSGVYYEPSC---TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARN 265

Query: 299 K-NMCGIATCASYPVV 313
           K N CGIA+  SYP +
Sbjct: 266 KGNHCGIASFPSYPEI 281


>gi|302790836|ref|XP_002977185.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
 gi|300155161|gb|EFJ21794.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
          Length = 299

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/257 (40%), Positives = 155/257 (60%), Gaps = 14/257 (5%)

Query: 60  LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCG 119
           L+ A F   Y   ++S      R A   K++D+  S+    L +R    ++P+KDQG CG
Sbjct: 54  LTNAEFRANYVGKFKSPRYQDRRPA---KDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCG 110

Query: 120 SCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGL 179
           SCW FS   S+E+A+  A  + +SLSEQQL+DC     +QGC GG P  AF+++  NGG+
Sbjct: 111 SCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTV--DQGCQGGFPEDAFKFVVENGGV 168

Query: 180 DTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-G 238
            TEEAYPYTG  G C  +++N  V++    ++T  + D L  AV    PV+V     D  
Sbjct: 169 TTEEAYPYTGFAGSCN-ANKNKVVEITGYKDVTKDSADALMKAVSKT-PVTVGICGSDQN 226

Query: 239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM- 297
           F+ Y+SG+ S  +C N+    +HAV+ +GYG E G+PYW+IKNSWG +WG++G+ K++  
Sbjct: 227 FQNYRSGILSG-QCSNS---RDHAVLVIGYGTEGGMPYWIIKNSWGTSWGENGFMKIKKK 282

Query: 298 -GKNMCGIATCASYPVV 313
            G+ MCG+   +SYP  
Sbjct: 283 DGEGMCGMNGQSSYPTT 299


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 20/237 (8%)

Query: 81  LRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 140
            ++  F++  D ++      + +R    ++PVK+QG CG CW FS  G++E       G 
Sbjct: 140 FKYQNFTRLDDDVQ------VDWRQQGAVTPVKNQGQCGCCWAFSAVGAMEGLIMITTGN 193

Query: 141 GISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN 200
            +SLSEQQ++DC ++  NQGCNGG    AF+Y+  NGG+ TE+AYPY+   G C+     
Sbjct: 194 LVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVVNNGGVTTEDAYPYSAVQGTCQNVQPA 253

Query: 201 VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG----FRFYKSGVYSSTKCGNTP 256
             +      ++  G E+ L +AV   +PVSV    VDG    F+FY+ G+Y    CG   
Sbjct: 254 ATISGFQ--DLPSGDENALANAVA-NQPVSVG---VDGGSSPFQFYQGGIYDGDGCGT-- 305

Query: 257 MDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
            D+NHAV A+GYG +D G  YW++KNSWG  WG++G+ +++MG   CGI+T ASYP 
Sbjct: 306 -DMNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQLQMGVGACGISTMASYPT 361


>gi|255580657|ref|XP_002531151.1| cysteine protease, putative [Ricinus communis]
 gi|223529264|gb|EEF31236.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 150/301 (49%), Gaps = 60/301 (19%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTN-CKGLSYRLGLN------------------ 108
           R+G++Y    E ++R+  F +N+  I S N   G SY+LG+N                  
Sbjct: 45  RFGRVYNDGNEKEIRYKIFKENVQRIESFNKASGKSYKLGINQFADLTNEEFKTSRNRFK 104

Query: 109 ------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138
                                         ++ +KDQG CGSCW FS   ++E     A 
Sbjct: 105 GHMCSSQAGPFRYENLTAAPSSMDWRKKGAVTAIKDQGQCGSCWAFSAVAAVEGITQLAT 164

Query: 139 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS 198
            K ISLSEQ+LVDC     +QGC GGL   AF++I+ N GL TE  YPY G DG C    
Sbjct: 165 SKLISLSEQELVDCDTKGEDQGCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDGTCNTKQ 224

Query: 199 E-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTP 256
           E N   ++    ++    E  L  AV   +PVSVA +    GF+FY SG+++    G+  
Sbjct: 225 EANHAAKINGFEDVPANNEGALMKAVA-KQPVSVAIDAGGFGFQFYSSGIFT----GDCG 279

Query: 257 MDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
            +++H V AVGYG  +G+ YWL+KNSWG  WG+ GY +M+      + +CGIA  ASYP 
Sbjct: 280 TELDHGVAAVGYGESNGMNYWLVKNSWGTQWGEEGYIRMQKDIDAKEGLCGIAMQASYPT 339

Query: 313 V 313
            
Sbjct: 340 A 340


>gi|326493368|dbj|BAJ85145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/311 (36%), Positives = 150/311 (48%), Gaps = 66/311 (21%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLN--------- 108
           +A +   +G  Y ++ E + RF  F  NL  I   N        S+RLGLN         
Sbjct: 43  YAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRFADLTNEE 102

Query: 109 -----------------------------------------ISPVKDQGHCGSCWTFSTT 127
                                                    +  VKDQG CGSCW FS  
Sbjct: 103 YRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAVGAVKDQGGCGSCWAFSAI 162

Query: 128 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187
            ++E       G  I LSEQ+LVDC  ++N QGCNGGL   AFE+I  NGG+D+EE YPY
Sbjct: 163 AAVEGINQIVTGDMIPLSEQELVDCDTSYN-QGCNGGLMDYAFEFIINNGGIDSEEDYPY 221

Query: 188 TGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG 245
             +D  C  + +N  V  +D   ++ + +E  LQ AV   +P+SVA E     F+ YKSG
Sbjct: 222 KERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVA-NQPISVAIEAGGRAFQLYKSG 280

Query: 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNM 301
           +++ T CG     ++H V AVGYG E+G  YWL++NSWG  WG+ GY +ME         
Sbjct: 281 IFTGT-CGTA---LDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRMERNIKASSGK 336

Query: 302 CGIATCASYPV 312
           CGIA   SYP 
Sbjct: 337 CGIAVEPSYPT 347


>gi|1149525|emb|CAA64218.1| preprocathepsin K [Mus musculus]
          Length = 329

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 IDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT--ENYG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF+Y++ NGG+D+E+A+PY G+D  C +++     +      I +G E  L+
Sbjct: 177 CGGGYMTTAFQYVQQNGGIDSEDAFPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  +W+I
Sbjct: 237 RAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct: 295 KNSWGESWGNKGYALLARNKNNACGITNMASFP 327


>gi|356577813|ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/307 (36%), Positives = 155/307 (50%), Gaps = 63/307 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRS-TNCKGLSYRLGLN-------------- 108
           ++  RYGK+Y+  +E + RF  F +N++ I +  N     Y+L +N              
Sbjct: 588 QWMTRYGKVYKDPQEREKRFRIFKENVNYIEAFNNAANKRYKLAINQFADLTNEEFIAPR 647

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++P+KDQG CG CW FS   + E 
Sbjct: 648 NRFKGHMCSSIIRTTTFKYENVTAVPSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEG 707

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            +    GK ISLSEQ+LVDC     +QGC GGL   AF+++  N GL+TE  YPY G DG
Sbjct: 708 IHALTSGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDG 767

Query: 193 VCKFS-SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            C  + + N  V +    ++    E  LQ AV   +PVSVA +     F+FYKSGV++ +
Sbjct: 768 KCNANEAANDVVTITGYEDVPANNEKALQKAVA-NQPVSVAIDASGSDFQFYKSGVFTGS 826

Query: 251 KCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIA 305
            CG    +++H V AVGYGV  DG  YWL+KNSWG  WG+ GY +M+ G    + +CGIA
Sbjct: 827 -CGT---ELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEEGLCGIA 882

Query: 306 TCASYPV 312
             ASYP 
Sbjct: 883 MQASYPT 889


>gi|213623960|gb|AAI70453.1| Hypothetical protein LOC100127265 [Xenopus laevis]
          Length = 331

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 129/215 (60%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++P+++QG CGSCW FS+ G+LE    +  GK + LS Q LVDC +   N G
Sbjct: 121 IDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVK--KNDG 178

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY++ N G+D+E+AYPY G+D  C ++             +  G E  L+
Sbjct: 179 CGGGYMTNAFEYVRDNKGIDSEKAYPYVGEDQECMYNVSGRAAACKGYKEVQEGNEKALK 238

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV LV PVSV  +  +  F+FY  GVY    C  +  D+NHAV+AVGYG +    YW++
Sbjct: 239 KAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDC--SAEDINHAVLAVGYGTQKKAKYWIV 296

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWGE WGD GY  M   K N CGIA  ASYPV+
Sbjct: 297 KNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331


>gi|218183|dbj|BAA14403.1| oryzain beta precursor [Oryza sativa Japonica Group]
          Length = 471

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 135/218 (61%), Gaps = 11/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS   ++E+      G+ I+LSEQ+LV+C+    N G
Sbjct: 144 VDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSG 203

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL + AF++I  NGG+DTE+ YPY   DG C  + EN  V  +D   ++    E  L
Sbjct: 204 CNGGLMADAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSL 263

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           Q AV   +PVSVA E     F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  YW+
Sbjct: 264 QKAVAH-QPVSVAIEAGGREFQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDYWI 318

Query: 279 IKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           ++NSWG  WG+ GY +ME   N+    CGIA  ASYP 
Sbjct: 319 VRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPT 356


>gi|358334194|dbj|GAA34712.2| cathepsin L [Clonorchis sinensis]
          Length = 401

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/288 (37%), Positives = 159/288 (55%), Gaps = 25/288 (8%)

Query: 25  ASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARR-----YGKIYESVEEM 79
           A   + +   R+ + + +R  + +V  + G   + +   RF+ R       +I+++ EE 
Sbjct: 80  AGPVEQAKRFRIFTENFIRINQHNVRYIQGDTFYTMGINRFSDRVSWTILSQIFQTKEEF 139

Query: 80  KLRFATFSKNLDLIRSTNCK----------GLSYRLGLNISPVKDQGHCGSCWTFSTTGS 129
             R   F + L      N K           + +R    ++PVKDQG CGSCW FS TG+
Sbjct: 140 G-RLLGF-RGLRNTSRANSKYITIAAEPPASIDWRSTGAVTPVKDQGQCGSCWAFSATGA 197

Query: 130 LEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY-T 188
           +E  +  A  + +SLSEQQLVDC+  F N GC+GG    AF+Y+K+  G+ TE  YPY +
Sbjct: 198 IEGQHFMATKQLVSLSEQQLVDCSSHFGNFGCSGGWMDNAFKYVKHTHGITTETKYPYIS 257

Query: 189 GKDGV----CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYK 243
           G+ G     C+F  + +   V   V++    E  L+ AVGL  P+SVA    ++ F  YK
Sbjct: 258 GETGTPNPRCEFHGQAIAATVTGIVDLPRSNEFALKQAVGLHGPISVAIHASLESFMGYK 317

Query: 244 SGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHG 291
           SGVYS  +C +  +D  HAV+ VGYG E+G+PYWLIKNSWG +WG+ G
Sbjct: 318 SGVYSDEECSSDQLD--HAVLVVGYGEENGIPYWLIKNSWGFDWGEMG 363


>gi|37732137|gb|AAR02406.1| cysteine proteinase [Anthonomus grandis]
          Length = 322

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 135/213 (63%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CGSCW+F+ TGS E AY++   + +SLSEQQLVDC+ + N  G
Sbjct: 115 VDWRSAGQVTGVKNQGSCGSCWSFALTGSTEGAYYRKHKQLVSLSEQQLVDCSTSIN-YG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           CNGG     F YI+   GL TE +YPYTG DG CK+ S  V  ++ + V++  G+E ++ 
Sbjct: 174 CNGGFLDATFPYIE-QYGLQTESSYPYTGVDGSCKYDSSKVVTKISNYVSLH-GSESKVL 231

Query: 221 HAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280
             VG + PV++  +       Y SG+Y++ KC  T  ++NHAV+ VGYG ++G  YW++K
Sbjct: 232 EPVGSIGPVAITMDA-SYLSSYSSGIYAANKC--TTTNLNHAVLVVGYGSQNGQNYWIVK 288

Query: 281 NSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           NSWG  WG+ GYF++  G N CG A    YP +
Sbjct: 289 NSWGSGWGEQGYFRLLRGSNECGCAQDPVYPNI 321


>gi|110737959|dbj|BAF00916.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/274 (40%), Positives = 155/274 (56%), Gaps = 23/274 (8%)

Query: 56  ARHALSFARFAR----RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG------LSYRL 105
           A + L   +F       Y K+Y        R    +KN++   S    G      + +R 
Sbjct: 94  ATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQ 153

Query: 106 GLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165
              ++P+KDQG CGSCW FSTT ++E       G+ ISLSEQ+LVDC +++N QGCNGGL
Sbjct: 154 KGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYN-QGCNGGL 212

Query: 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVG 224
              AF++I  NGGL+TE+ YPY G  G C    +N  V  +D   ++    E  L+ A+ 
Sbjct: 213 MDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAIS 272

Query: 225 LVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSW 283
             +PV VA E     F+ Y+SG+++ + CG    +++HAVVAVGYG E+GV YW+++NSW
Sbjct: 273 Y-QPVRVAIEAGGRIFQHYQSGIFTGS-CG---TNLDHAVVAVGYGSENGVDYWIVRNSW 327

Query: 284 GENWGDHGYFKMEMG-----KNMCGIATCASYPV 312
           G  WG+ GY +ME          CGIA  ASYPV
Sbjct: 328 GPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361


>gi|294883334|ref|XP_002770714.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239873999|gb|EER02719.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 330

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 156/317 (49%), Gaps = 59/317 (18%)

Query: 49  VLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN 108
           +++ + +    L+F  F  ++GK YES EE   R A F  NL LI   N K LSY+LG+N
Sbjct: 15  LVKCLDEGTVELAFMGFQHKFGKNYESKEEEVKRNAIFQANLHLIEQVNAKNLSYKLGVN 74

Query: 109 --------------------------------------------------ISPVKDQGHC 118
                                                             +SPVKDQG C
Sbjct: 75  EYADLTHEEFAALKLGTLKMRPAEHASLSLFVSADTTQLPTSVDWRNKSVLSPVKDQGSC 134

Query: 119 GSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGG 178
           GSCW FS  G+LEA Y  A GK   LSEQQLVDC+  +   GC GG  + A++YIK + G
Sbjct: 135 GSCWAFSAAGALEAQYAIATGKLRPLSEQQLVDCSHKYGTNGCFGGFMADAYKYIK-SAG 193

Query: 179 LDTEEAYPYTGKDGVCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237
           LD E  YPY G +  C+   +   G+ V   ++     E  L  A+    PVSVA    D
Sbjct: 194 LDQESTYPYKGVNEPCRPREKKADGIPVRFVLDTK--TEQSLMKALADA-PVSVAMYASD 250

Query: 238 G-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME 296
             F  Y SGVYSST C     +++HAVVAVGYG ++G  Y+++KNSWG +WG  GYF ++
Sbjct: 251 FLFHLYLSGVYSSTTCNG---EIDHAVVAVGYGADEGSDYFILKNSWGSSWGMGGYFFLK 307

Query: 297 MGKNMCGIATCASYPVV 313
            G    G      Y VV
Sbjct: 308 RGVGGHGECNILEYMVV 324


>gi|255032|gb|AAB23155.1| COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid
           cycling base population CrGC5, Peptide, 328 aa]
          Length = 328

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/274 (41%), Positives = 156/274 (56%), Gaps = 22/274 (8%)

Query: 55  QARHALSFARFAR----RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS------YR 104
            A + L    FA      Y  +Y       +R  T +KN+++  S     +       +R
Sbjct: 48  NATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNDVEVPVTVDWR 107

Query: 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGG 164
               ++ +KDQG CGSCW FST  ++E       G+ +SLSEQ+LVDC +++N QGCNGG
Sbjct: 108 QKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYN-QGCNGG 166

Query: 165 LPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAV 223
           L   AF++I  NGGL+TE+ YPY G +G C    +N  V  +D   ++    E  L+ AV
Sbjct: 167 LMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAV 226

Query: 224 GLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
              +PVSVA +     F+ Y+SG+++  KCG T MD  HAVVAVGYG E+GV YW+++NS
Sbjct: 227 SY-QPVSVAIDAGGRAFQHYQSGIFTG-KCG-TNMD--HAVVAVGYGSENGVDYWIVRNS 281

Query: 283 WGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           WG  WG+ GY +ME         CGIA  ASYPV
Sbjct: 282 WGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315


>gi|359359213|gb|AEV41117.1| putative oryzain beta chain precursor [Oryza officinalis]
          Length = 465

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 135/220 (61%), Gaps = 11/220 (5%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS   ++E+      G+ I+LSEQ+LV+C+    N
Sbjct: 142 ESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQN 201

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAED 217
            GCNGGL   AF++I  NGG+DTE+ YPY   DG C  + EN  V  +D   ++    E 
Sbjct: 202 SGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEK 261

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            LQ AV   +PVSVA E     F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  Y
Sbjct: 262 SLQKAVAH-QPVSVAIEAGGREFQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDY 316

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           W+++NSWG  WG+ GY +ME   N+    CGIA  ASYP 
Sbjct: 317 WIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPT 356


>gi|7770062|ref|NP_036137.1| cathepsin J precursor [Mus musculus]
 gi|6467374|gb|AAF13142.1|AF136272_1 cathepsin J precursor [Mus musculus]
 gi|15418834|gb|AAK58455.1| cathepsin J [Mus musculus]
 gi|148709364|gb|EDL41310.1| cathepsin J, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 125/211 (59%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PV++QG CGSCW F+  G++E       G    LS Q L+DC++   N+GC  G   Q
Sbjct: 125 VTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQ 184

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEY+  N GL+ E  YPY GKDG C++ SEN    + D VN+    E  L  AV  + P
Sbjct: 185 AFEYVLKNKGLEAEATYPYEGKDGPCRYRSENASANITDYVNLPPN-ELYLWVAVASIGP 243

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG----VEDGVPYWLIKNSW 283
           VS A +   D FRFY  G+Y    C  +   VNHAV+ VGYG    V+DG  YWLIKNSW
Sbjct: 244 VSAAIDASHDSFRFYNGGIYYEPNC--SSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSW 301

Query: 284 GENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           GE WG +GY ++     N CGIA+ ASYP +
Sbjct: 302 GEEWGMNGYMQIAKDHNNHCGIASLASYPNI 332


>gi|84028184|sp|Q9R014.2|CATJ_MOUSE RecName: Full=Cathepsin J; AltName: Full=Cathepsin L-related
           protein; AltName: Full=Cathepsin P; AltName:
           Full=Catlrp-p; Flags: Precursor
 gi|5306071|gb|AAD41898.1|AF158182_1 preprocathepsin P [Mus musculus]
 gi|12838143|dbj|BAB24099.1| unnamed protein product [Mus musculus]
 gi|74199838|dbj|BAE20748.1| unnamed protein product [Mus musculus]
 gi|74355544|gb|AAI03770.1| Cathepsin J [Mus musculus]
 gi|148709363|gb|EDL41309.1| cathepsin J, isoform CRA_a [Mus musculus]
          Length = 334

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 125/211 (59%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PV++QG CGSCW F+  G++E       G    LS Q L+DC++   N+GC  G   Q
Sbjct: 126 VTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQ 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AFEY+  N GL+ E  YPY GKDG C++ SEN    + D VN+    E  L  AV  + P
Sbjct: 186 AFEYVLKNKGLEAEATYPYEGKDGPCRYRSENASANITDYVNLPPN-ELYLWVAVASIGP 244

Query: 229 VSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG----VEDGVPYWLIKNSW 283
           VS A +   D FRFY  G+Y    C  +   VNHAV+ VGYG    V+DG  YWLIKNSW
Sbjct: 245 VSAAIDASHDSFRFYNGGIYYEPNC--SSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSW 302

Query: 284 GENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           GE WG +GY ++     N CGIA+ ASYP +
Sbjct: 303 GEEWGMNGYMQIAKDHNNHCGIASLASYPNI 333


>gi|297603535|ref|NP_001054211.2| Os04g0670200 [Oryza sativa Japonica Group]
 gi|109939735|sp|P25777.2|ORYB_ORYSJ RecName: Full=Oryzain beta chain; Flags: Precursor
 gi|32488398|emb|CAE02823.1| OSJNBa0043A12.28 [Oryza sativa Japonica Group]
 gi|90399163|emb|CAJ86092.1| H0818H01.14 [Oryza sativa Indica Group]
 gi|125550169|gb|EAY95991.1| hypothetical protein OsI_17862 [Oryza sativa Indica Group]
 gi|215766596|dbj|BAG98700.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255675868|dbj|BAF16125.2| Os04g0670200 [Oryza sativa Japonica Group]
          Length = 466

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 134/218 (61%), Gaps = 11/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS   ++E+      G+ I+LSEQ+LV+C+    N G
Sbjct: 145 VDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSG 204

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AF++I  NGG+DTE+ YPY   DG C  + EN  V  +D   ++    E  L
Sbjct: 205 CNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSL 264

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           Q AV   +PVSVA E     F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  YW+
Sbjct: 265 QKAVAH-QPVSVAIEAGGREFQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDYWI 319

Query: 279 IKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           ++NSWG  WG+ GY +ME   N+    CGIA  ASYP 
Sbjct: 320 VRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPT 357


>gi|224056176|ref|XP_002298740.1| predicted protein [Populus trichocarpa]
 gi|222845998|gb|EEE83545.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 154/306 (50%), Gaps = 67/306 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSYRLGLN------------------ 108
           ++G+ Y ++ E + RF  F  NL  I   N  G  SY+LGLN                  
Sbjct: 31  KHGRAYNALGEKERRFEIFKDNLKFIDEHNSVGNPSYKLGLNKFADLSNDEYRSVYLGTR 90

Query: 109 -----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAA 133
                                              ++PVKDQG CGSCW FST G++E  
Sbjct: 91  MDGKGRLLGGPKSERYLFKEGDDLPETVDWREKGAVAPVKDQGQCGSCWAFSTVGAVEGI 150

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
                G   SLSEQ+LVDC + + N GCNGGL   AF++I  NGG+DTEE YPY   D +
Sbjct: 151 NQIVTGNLTSLSEQELVDCDKTY-NLGCNGGLMDYAFDFIIENGGIDTEEDYPYKAIDSM 209

Query: 194 CKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTK 251
           C  + +N  V  +D   ++    E  L+ AV   +PVSVA E    GF+ Y+SGV++ + 
Sbjct: 210 CDPNRKNARVVTIDGYEDVPQNDEKSLKKAVA-NQPVSVAIEAGGRGFQLYQSGVFTGS- 267

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIAT 306
           CG     ++H VV VGYG E GV YW+++NSWG  WG++GY +ME          CGIA 
Sbjct: 268 CGTQ---LDHGVVTVGYGTEHGVDYWIVRNSWGPAWGENGYIRMERDVASTETGKCGIAM 324

Query: 307 CASYPV 312
            ASYP 
Sbjct: 325 EASYPT 330


>gi|242077600|ref|XP_002448736.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
 gi|241939919|gb|EES13064.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 133/220 (60%), Gaps = 11/220 (5%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS   S+E+      G+ ++LSEQ+LV+C+    N
Sbjct: 147 ESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESINQIVTGEMVTLSEQELVECSTDGGN 206

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAED 217
            GCNGGL   AF +I  NGG+DTE+ YPY   DG C  +  N  V  +D+  ++    E 
Sbjct: 207 SGCNGGLMDAAFNFIIKNGGIDTEDDYPYKAVDGKCDINRRNAKVVSIDAFEDVPENDEK 266

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            LQ AV   +PVSVA E     F+ YKSGV+S    G+   +++H VVAVGYG E+G  Y
Sbjct: 267 SLQKAVAH-QPVSVAIEAGGRQFQLYKSGVFS----GSCTTNLDHGVVAVGYGTENGKDY 321

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           W+++NSWG  WG+ GY +ME   N     CGIA  ASYP 
Sbjct: 322 WIVRNSWGPKWGEAGYIRMERNINATTGKCGIAMMASYPT 361


>gi|354472953|ref|XP_003498701.1| PREDICTED: cathepsin K [Cricetulus griseus]
          Length = 329

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N G
Sbjct: 119 IDYRKKGYVTPVKNQGECGSCWAFSSAGALEGQLKKKTGKLLNLSPQNLVDCVS--ENYG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF Y++ NGG+D+E+AYPY G+D  C ++      +      I +G+E  L+
Sbjct: 177 CGGGYMTTAFRYVQTNGGIDSEDAYPYVGQDQSCMYNPTAKAAKCRGYREIPVGSEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  +W+I
Sbjct: 237 RAVARVGPISVSIDASLTSFQFYSRGVYYDENCDGD--NVNHAVLVVGYGAQKGNKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           KNSWGE+WG+ GY  +   + N CGI   AS+P
Sbjct: 295 KNSWGESWGNKGYVLLARNRNNACGITNLASFP 327


>gi|118127|sp|P25251.1|CYSP4_BRANA RecName: Full=Cysteine proteinase COT44; Flags: Precursor
          Length = 328

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/274 (41%), Positives = 156/274 (56%), Gaps = 22/274 (8%)

Query: 55  QARHALSFARFAR----RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK------GLSYR 104
            A + L    FA      Y  +Y       +R  T +KN+++  S           + +R
Sbjct: 48  NATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWR 107

Query: 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGG 164
               ++ +KDQG CGSCW FST  ++E       G+ +SLSEQ+LVDC +++N QGCNGG
Sbjct: 108 QKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYN-QGCNGG 166

Query: 165 LPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAV 223
           L   AF++I  NGGL+TE+ YPY G +G C    +N  V  +D   ++    E  L+ AV
Sbjct: 167 LMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAV 226

Query: 224 GLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNS 282
              +PVSVA +     F+ Y+SG+++  KCG T MD  HAVVAVGYG E+GV YW+++NS
Sbjct: 227 SY-QPVSVAIDAGGRAFQHYQSGIFTG-KCG-TNMD--HAVVAVGYGSENGVDYWIVRNS 281

Query: 283 WGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           WG  WG+ GY +ME         CGIA  ASYPV
Sbjct: 282 WGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315


>gi|374713651|gb|AEZ65083.1| cysteine protease [Carica papaya]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 153/306 (50%), Gaps = 67/306 (21%)

Query: 68  RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------------ISP 111
           ++GK Y ++ E + RF  F  NL  I   N + L+YRLGLN                + P
Sbjct: 55  KHGKAYNALGEKEKRFGIFKDNLRFIDEHNSQNLTYRLGLNRFADLTNEEYRSMYLGVKP 114

Query: 112 --------------------------------------VKDQGHCGSCWTFSTTGSLEAA 133
                                                 VKDQG CGSCW FST  ++E  
Sbjct: 115 GATRVTRKVSRKSDRFAARVGDALPDFIDWRKEGAVVGVKDQGSCGSCWAFSTIAAVEGI 174

Query: 134 YHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV 193
                G  ISLSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+D+EE YPY   D  
Sbjct: 175 NQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIINNGGIDSEEDYPYRAADQK 233

Query: 194 CKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTK 251
           C    +N  V  +D   ++    E  L+ AV   +PVSVA E     F+ Y+SGV++  K
Sbjct: 234 CDQYRKNANVVSIDGYEDVPENDEAALKKAVAK-QPVSVAIEAGGRAFQLYQSGVFTG-K 291

Query: 252 CGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIAT 306
           CG +   ++H V AVGYG E+G  YW++ NSWG+NWG+ GY +ME          CGIA 
Sbjct: 292 CGTS---LDHGVAAVGYGTENGQDYWIVGNSWGKNWGEDGYIRMERNLAGSSSGKCGIAI 348

Query: 307 CASYPV 312
             SYP+
Sbjct: 349 GPSYPI 354


>gi|224093956|ref|XP_002310053.1| predicted protein [Populus trichocarpa]
 gi|224147016|ref|XP_002336386.1| predicted protein [Populus trichocarpa]
 gi|222834869|gb|EEE73318.1| predicted protein [Populus trichocarpa]
 gi|222852956|gb|EEE90503.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 153/305 (50%), Gaps = 60/305 (19%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLN-------------- 108
           ++  +YG++Y+   E   R++ F +N+  I + N + G SY+LG+N              
Sbjct: 41  QWMTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFKASR 100

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             ++PVKDQG CG CW FS   ++E   
Sbjct: 101 NRFKGHMCSPQAGPFRYENVSAVPSTVDWRKEGAVTPVKDQGQCGCCWAFSAVAAMEGIN 160

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
               GK ISLSEQ++VDC     +QGCNGGL   AF++I+ N GL TE  YPY G DG C
Sbjct: 161 KLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYKGTDGTC 220

Query: 195 KFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKC 252
             +   +   ++    ++   +E  L  AV   +PVSVA +     F+FY SG+++    
Sbjct: 221 NTNKAAIHAAKITGFEDVPANSEAALMKAVAK-QPVSVAIDAGGSDFQFYSSGIFT---- 275

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCA 308
           G+    ++H V AVGYGV DG  YWL+KNSWG  WG+ GY +M+      + +CGIA  A
Sbjct: 276 GSCDTQLDHGVTAVGYGVSDGSKYWLVKNSWGAQWGEEGYIRMQKDISAKEGLCGIAMQA 335

Query: 309 SYPVV 313
           SYP  
Sbjct: 336 SYPTA 340


>gi|28194647|gb|AAO33585.1|AF479267_1 cathepsin L [Mesocricetus auratus]
          Length = 333

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/221 (45%), Positives = 130/221 (58%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PVK+QG CGSCW FS  G+LE       G  +SLSEQ LVDC++   N
Sbjct: 116 KSVDWREKGCVTPVKNQGQCGSCWAFSACGALEGQMCLKTGVLVSLSEQNLVDCSRGEGN 175

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           QGCNGGL   AF+Y+  N GLD+EE+YPY  KDG CK+  E         V+I    E  
Sbjct: 176 QGCNGGLMDFAFQYVLNNKGLDSEESYPYEAKDGTCKYKPEFAAANDTGYVDIPQ-LEKA 234

Query: 219 LQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  V P++VA +     F+FY SG+Y    C  +  D++H V+ +GYG E    + 
Sbjct: 235 LMKAVATVGPIAVAIDASHPSFQFYSSGIYFEPNC--SSKDLDHGVLVIGYGFEGTDSNK 292

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YW++KNSWG  WG  G+F +   K N CGIAT ASYP V
Sbjct: 293 KKYWIVKNSWGTGWGMGGFFHIAKDKNNHCGIATAASYPTV 333


>gi|312381834|gb|EFR27484.1| hypothetical protein AND_05795 [Anopheles darlingi]
          Length = 508

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 131/206 (63%), Gaps = 11/206 (5%)

Query: 114 DQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI 173
           +QG CGSCW FS+TG++E  + +   K +SLSEQ LVDC   + N+GC GG   ++F+YI
Sbjct: 308 EQGKCGSCWAFSSTGAVEGQHFRKTNKLVSLSEQNLVDCTSNYRNKGCKGGAIYRSFQYI 367

Query: 174 KYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233
           + N G+DTE++YPY  K+G C ++ + +G +V   V+I  G ED L  AV  V P+S+  
Sbjct: 368 EQNHGIDTEKSYPYQAKEGPCAYNPKAIGAKVKGYVHIPTGDEDALMKAVATVGPISI-- 425

Query: 234 EVVDG----FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWG 288
            VVD     F+ Y  GVY  ++C  T  ++ HA++ VGYG  + G  +WL+KNSWG +WG
Sbjct: 426 -VVDSRHHTFKHYADGVYYDSQCSAT--NLTHAMLVVGYGTSKKGEDFWLVKNSWGTSWG 482

Query: 289 DHGYFKMEMGK-NMCGIATCASYPVV 313
             GY KM   + N CGIA  A YP+V
Sbjct: 483 IKGYIKMARNRNNSCGIANKAYYPLV 508


>gi|283046734|ref|NP_001164314.1| cathepsin L precursor [Tribolium castaneum]
 gi|270001247|gb|EEZ97694.1| cathepsin L precursor [Tribolium castaneum]
          Length = 328

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 130/207 (62%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI-SLSEQQLVDCAQAFNNQGCNGGLPS 167
           +S VK+QG CGSCW+FSTTG++E     + G+G+ SLSEQ LVDC+ A+ N GCNGG   
Sbjct: 126 VSEVKNQGQCGSCWSFSTTGAVEGQLAIS-GRGLTSLSEQNLVDCSSAYGNAGCNGGWMD 184

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
            AF+YI ++ G+ +E AYPYT  +G C+F+       +    ++  G E+ L+ AV    
Sbjct: 185 SAFDYI-HDNGIMSESAYPYTASEGSCRFNPSESVTSLQGYYDLPSGDENALKSAVANNG 243

Query: 228 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           P++VA +  D  +FY  GV   T C  +   +NH V+ VGYG E G  YW++KNSWG  W
Sbjct: 244 PIAVALDATDELQFYSGGVLYDTTC--SAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGW 301

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY++    + N CGIAT ASYP +
Sbjct: 302 GEQGYWRQARNRNNNCGIATAASYPAL 328


>gi|156384930|ref|XP_001633385.1| predicted protein [Nematostella vectensis]
 gi|156220454|gb|EDO41322.1| predicted protein [Nematostella vectensis]
          Length = 548

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 144/300 (48%), Gaps = 51/300 (17%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F ++ +++ K Y+  +E   R   F  NL  I S N +   Y L +N             
Sbjct: 245 FDKYVKKHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRHAGYYLAMNHLGDRSDKELRVL 304

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVKDQ  CGSCW+F TTG++E 
Sbjct: 305 RGRRYTKGYNGGLPYKPDMASINDVPDEMNWVIRGAVTPVKDQAVCGSCWSFGTTGTIEG 364

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKD 191
                      LS+Q L+DC+    N  C+GG   ++++YI  +GG+ TEE+Y PY G D
Sbjct: 365 TLFLKTKYLTRLSQQNLMDCSWGEGNNACDGGEDFRSYQYIMKSGGIATEESYGPYLGAD 424

Query: 192 GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
           G C      +G  +   VNIT G    L+ A+    P+SV+ +       FY  GVY   
Sbjct: 425 GYCHKKDAEIGATITGYVNITEGDLSALKTAIAQKGPISVSIDASHKSLSFYSYGVYYEP 484

Query: 251 KCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASY 310
           KCGN   D++H+V+AVGYG  DG PYW+IKNSW  +WG +GY  M    N CG+AT A+Y
Sbjct: 485 KCGNKNEDLDHSVLAVGYGTMDGKPYWMIKNSWSTHWGMNGYVLMSQKDNNCGVATAATY 544


>gi|224162986|ref|XP_002338508.1| predicted protein [Populus trichocarpa]
 gi|222872535|gb|EEF09666.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 152/305 (49%), Gaps = 60/305 (19%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLN-------------- 108
           ++  +YG++Y+   E   R++ F +N+  I + N + G SY+LG+N              
Sbjct: 7   QWMTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFKASR 66

Query: 109 ----------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAY 134
                                             ++PVKDQG CG CW FS   ++E   
Sbjct: 67  NRFKGHMCSPQAGPFRYENVSAVPSTVDWRKEGAVTPVKDQGQCGCCWAFSAVAAMEGIN 126

Query: 135 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 194
               GK ISLSEQ++VDC     +QGCNGGL   AF++I+ N GL TE  YPY G DG C
Sbjct: 127 KLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEANYPYKGTDGTC 186

Query: 195 KFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKC 252
                 +   ++    ++   +E  L  AV   +PVSVA +     F+FY SG+++    
Sbjct: 187 NTKKSAIHAAKITGFEDVPANSEAALMKAVAK-QPVSVAIDAGGSDFQFYSSGIFT---- 241

Query: 253 GNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCA 308
           G+    ++H V AVGYGV DG  YWL+KNSWG  WG+ GY +M+      + +CGIA  A
Sbjct: 242 GSCDTQLDHGVTAVGYGVSDGSKYWLVKNSWGAQWGEEGYIRMQKDISAKEGLCGIAMQA 301

Query: 309 SYPVV 313
           SYP  
Sbjct: 302 SYPTA 306


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 131/218 (60%), Gaps = 11/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS   S+E+      G+ ++LSEQ+LV+C+    N G
Sbjct: 203 VDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSG 262

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AF++I  NGG+DTE  YPY   DG C  + EN  V  +D   ++    E  L
Sbjct: 263 CNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSL 322

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           Q AV   +PVSVA E     F+ YK+GV++    G    +++H VVAVGYG E+G  YW+
Sbjct: 323 QKAVAH-QPVSVAIEAGGREFQLYKAGVFT----GTCTTNLDHGVVAVGYGTENGKDYWI 377

Query: 279 IKNSWGENWGDHGYFKMEMGKN----MCGIATCASYPV 312
           ++NSWG  WG+ GY +ME   N     CGIA  ASYP 
Sbjct: 378 VRNSWGAKWGEDGYIRMERNVNATTGKCGIAMMASYPT 415


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 131/218 (60%), Gaps = 11/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS   S+E+      G+ ++LSEQ+LV+C+    N G
Sbjct: 143 VDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSG 202

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AF++I  NGG+DTE  YPY   DG C  + EN  V  +D   ++    E  L
Sbjct: 203 CNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSL 262

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           Q AV   +PVSVA E     F+ YK+GV+S    G    +++H VVAVGYG E+G  YW+
Sbjct: 263 QKAVAH-QPVSVAIEAGGREFQLYKAGVFS----GTCTTNLDHGVVAVGYGTENGKDYWI 317

Query: 279 IKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           ++NSWG  WG+ GY +ME   N     CGIA  ASYP 
Sbjct: 318 VRNSWGAKWGEDGYIRMERNVNATTGKCGIAMMASYPT 355


>gi|94448666|emb|CAI91571.1| silicatein a2 [Lubomirskia baicalensis]
          Length = 326

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CG+ + F+ TG++E A   +  K +SLSEQ ++DC+  + N G
Sbjct: 114 IDWRTKGAVTSVKNQGDCGASYAFAATGTMEGANALSNDKQVSLSEQNIIDCSVPYGNHG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG    A +Y+  NGG+DTE +Y + GK   C+++S+N G     +V I  G+E +L 
Sbjct: 174 CSGGDTYTAIKYVVDNGGIDTESSYSFRGKQSSCQYNSKNSGASATGAVGIPYGSESDLM 233

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +   + FRFY+SGV+ S+ C +T +  NHA++  GYG  +G  YWL+
Sbjct: 234 AAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTKL--NHAMLVTGYGSYNGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG+ WGD+GY  M   K N CGIA+ A Y ++
Sbjct: 292 KNSWGKYWGDNGYIMMVRNKYNQCGIASDALYSML 326


>gi|32396020|gb|AAP41847.1| senescence-associated cysteine protease [Anthurium andraeanum]
          Length = 460

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 150/271 (55%), Gaps = 21/271 (7%)

Query: 58  HALSFARFA----RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG------LSYRLGL 107
           + L   RFA      Y   Y  V+  ++R    ++     R  +  G      + +R   
Sbjct: 81  YTLGLTRFADLTNEEYRSTYLGVKPGQVRPRRANRAPGRGRDLSANGDDLPQKVDWREKG 140

Query: 108 NISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPS 167
            ++P+KDQG CGSCW FST  ++E       G  I LSEQ+LVDC  A+N +GCNGGL  
Sbjct: 141 AVAPIKDQGGCGSCWAFSTVAAVEGINQIVTGDLIVLSEQELVDCDTAYN-EGCNGGLMD 199

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
            AF++I  NGG+DTEE YPY  +DG+C  + +N  V  +DS    L  ++         +
Sbjct: 200 YAFQFIISNGGIDTEEDYPYKERDGLCDPNRKNAKVVSIDSYEDVLENDEHALKTAVAHQ 259

Query: 228 PVSVAFE-VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           PVSVA E     F+ YKSG++   +CG   +D++H VVAVGYG E G  YW+++NSWG++
Sbjct: 260 PVSVAIEGGGRSFQLYKSGIFDG-RCG---IDLDHGVVAVGYGTESGKDYWIVRNSWGKS 315

Query: 287 WGDHGYFKMEMG-----KNMCGIATCASYPV 312
           WG+ GY +ME          CGIA   SYP+
Sbjct: 316 WGEAGYIRMERNLPSSSSGKCGIAIEPSYPI 346


>gi|449438381|ref|XP_004136967.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 479

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 155/303 (51%), Gaps = 65/303 (21%)

Query: 69  YGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN-------------------- 108
           +GK Y ++ E + RF  F  NL  I   N +  +Y++GL                     
Sbjct: 69  HGKAYNAIGEKERRFEIFKDNLRFIDEHNRESRTYKVGLTRFADLTNEEYRARFLGGRFS 128

Query: 109 --------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQ 136
                                           ++ VKDQG CGSCW FS+  ++E     
Sbjct: 129 RKPRLSAAKSGRYAAALGDDLPDDVDWRKKGAVATVKDQGQCGSCWAFSSVAAVEGINQI 188

Query: 137 AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF 196
             G+ I LSEQ+LVDC ++FN  GCNGGL   AF++I  NGG+DTEE YPY G+D  C  
Sbjct: 189 VTGELIPLSEQELVDCDKSFN-MGCNGGLMDYAFQFIIGNGGIDTEEDYPYKGRDAACDP 247

Query: 197 SSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGN 254
           + +N  V  +D   ++    E  L+ AV   +PVSVA E     F+ Y+SGV++  +CG 
Sbjct: 248 NRKNAKVVTIDGYEDVPENDESSLKKAVA-NQPVSVAIEAGGRAFQLYQSGVFTG-RCG- 304

Query: 255 TPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME-----MGKNMCGIATCAS 309
              D++H VVAVGYG ++G  YW+++NSWG++WG+ GY ++E     +    CGIA   S
Sbjct: 305 --TDLDHGVVAVGYGTDNGTDYWIVRNSWGKDWGESGYIRLERNVANITTGKCGIAVQPS 362

Query: 310 YPV 312
           YP 
Sbjct: 363 YPT 365


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 125/213 (58%), Gaps = 6/213 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PVK+QG CGSCW FS+ G+LEA      GK ++LS Q LVDC    NN G
Sbjct: 79  VDYRKKGYVTPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLSPQNLVDCVS--NNDG 136

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AFEY+  N G+D+++ YPY G+D  C ++      +      I  G E  L+
Sbjct: 137 CGGGYMTNAFEYVHVNRGIDSDDTYPYIGQDENCMYNPTGKAAKCRGYKEIPEGDEKALK 196

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV    PVSV  +  +  F+FY  GVY    C     ++NHAV+AVGYG + G  +W++
Sbjct: 197 RAVARKGPVSVGIDASLASFQFYSRGVYYDENCNAD--NINHAVLAVGYGSQKGTKHWIV 254

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 311
           KNSWGE+WGD GY  M     N CGIA  AS+P
Sbjct: 255 KNSWGEDWGDKGYILMARNMNNACGIANLASFP 287


>gi|312386081|gb|ADQ74585.1| silicatein alpha 2 [Lubomirskia baicalensis]
          Length = 326

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 137/215 (63%), Gaps = 4/215 (1%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++ VK+QG CG+ + F+ TG++E A   +  K +SLSEQ ++DC+  + N G
Sbjct: 114 IDWRTKGAVTSVKNQGDCGASYAFAATGTMEGANALSNDKQVSLSEQNIIDCSVPYGNHG 173

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GG    A +Y+  NGG+DTE +Y + GK   C+++S+N G     +V I  G+E +L 
Sbjct: 174 CSGGDTYTAIKYVVDNGGIDTESSYSFRGKQSSCQYNSKNSGASATGAVGIPYGSESDLM 233

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PV+VA +   + FRFY+SGV+ S+ C +T +  NHA++  GYG  +G  YWL+
Sbjct: 234 AAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTKL--NHAMLVTGYGSYNGKDYWLV 291

Query: 280 KNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           KNSWG+ WGD+GY  M   K N CGIA+ A Y ++
Sbjct: 292 KNSWGKYWGDNGYIMMVRNKYNQCGIASDALYSML 326


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/207 (45%), Positives = 127/207 (61%), Gaps = 6/207 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI-SLSEQQLVDCAQAFNNQGCNGGLPS 167
           ++ VKDQG CGSCW+FSTTG++E     + GKG+ SLSEQ LVDC+  + N GCNGG   
Sbjct: 126 VTEVKDQGQCGSCWSFSTTGAVEGQLAIS-GKGLTSLSEQNLVDCSSQYGNAGCNGGWMD 184

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
            AF+YI ++ G+ +E AYPYT  DG C+F +      +    +I  G E  LQ AV    
Sbjct: 185 SAFDYI-HDNGIMSESAYPYTAMDGNCRFDASQSVTSLQGYYDIPSGDESALQDAVANNG 243

Query: 228 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENW 287
           PV+VA +  +  + Y  GV   T C  +   +NH V+ VGYG E G  YW++KNSWG  W
Sbjct: 244 PVAVALDATEELQLYSGGVLYDTTC--SAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGW 301

Query: 288 GDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ GY++    + N CGIAT ASYP +
Sbjct: 302 GEQGYWRQARNRNNNCGIATAASYPAL 328


>gi|301767946|ref|XP_002919405.1| PREDICTED: cathepsin S-like [Ailuropoda melanoleuca]
          Length = 340

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 127/208 (61%), Gaps = 6/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPS 167
           ++ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  +
Sbjct: 136 VTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 195

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           +AF+YI  N G+D+E +YPY   DG C++ S+N          +  G+ED+L+ AV    
Sbjct: 196 EAFQYIIDNNGIDSEASYPYKATDGKCRYDSKNRAATCSKYTELPSGSEDDLKEAVANKG 255

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N
Sbjct: 256 PVSVAIDARHSSFFLYRSGVYYDPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLN 312

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +GD GY +M     N CGIA+  SYP +
Sbjct: 313 FGDQGYIRMARNSGNHCGIASYPSYPEI 340


>gi|148927382|gb|ABR19827.1| cysteine proteinase [Elaeis guineensis]
          Length = 470

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 167/345 (48%), Gaps = 74/345 (21%)

Query: 30  DSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKN 89
           D + I    + G+R  E S      +    + +  +  ++G+ Y ++ E + RF  F  N
Sbjct: 24  DMSIISYDEAHGVRGLERS------EEEMRILYEGWLAKHGRAYNALGEKERRFEIFKDN 77

Query: 90  LDLIRSTNCKG----LSYRLGLN------------------------------------- 108
           +  I + N        S+RLGLN                                     
Sbjct: 78  VLFIDAHNAAADAGHRSFRLGLNRFADMTNEEYRAVYLGTRPAGHRRRARVGSDRYRYNA 137

Query: 109 ---------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 153
                          ++ VKDQG CGSCW FST  ++E       G  ISLSEQ+LVDC 
Sbjct: 138 GEDLPESVDWRAKGAVAAVKDQGSCGSCWAFSTVAAVEGINKIVTGDLISLSEQELVDCD 197

Query: 154 QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NIT 212
             +N QGCNGGL    FE+I  NGG+DTEE YPYT +DG C    +N  V  +D   ++ 
Sbjct: 198 NGYN-QGCNGGLMDYGFEFIINNGGIDTEEDYPYTARDGKCDQYRKNAKVVSIDGYEDVP 256

Query: 213 LGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 271
           +  E  LQ AV   +PVSVA E     F+ Y SG+++  +CG    D++H VVAVGYG E
Sbjct: 257 VNDEKALQKAVA-NQPVSVAIEAGGREFQLYHSGIFTG-RCG---TDLDHGVVAVGYGTE 311

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           +G  YW+++NSWG +WG+ GY +ME   N     CGIA   SYP 
Sbjct: 312 NGKDYWIVRNSWGGDWGESGYIRMERNVNTSTGKCGIAIEPSYPT 356


>gi|359359066|gb|AEV40973.1| putative oryzain beta chain precursor [Oryza punctata]
          Length = 461

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 134/220 (60%), Gaps = 11/220 (5%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++PVK+QG CGSCW FS   ++E+      G+ I+LSEQ+LV+C+    N
Sbjct: 138 ESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQN 197

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAED 217
            GCNGGL   AF++I  NGG+DTE+ YPY   DG C  + EN  V  +D   ++    E 
Sbjct: 198 SGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEK 257

Query: 218 ELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            LQ AV   +PVSVA E     F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  Y
Sbjct: 258 SLQKAVAH-QPVSVAIEAGGREFQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDY 312

Query: 277 WLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           W+++NSWG  WG+ GY +ME   N     CGIA  ASYP 
Sbjct: 313 WIVRNSWGPKWGESGYVRMERNINATTGKCGIAMMASYPT 352


>gi|164519063|ref|NP_001002813.2| cathepsin Q-like 2 precursor [Rattus norvegicus]
 gi|67678196|gb|AAH97257.1| Ctsql2 protein [Rattus norvegicus]
 gi|149039735|gb|EDL93851.1| rCG24202 [Rattus norvegicus]
          Length = 343

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/226 (43%), Positives = 130/226 (57%), Gaps = 10/226 (4%)

Query: 94  RSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 153
           R    K + +R    ++ V++QG C SCW F   G++E    +  GK   LS Q LVDC+
Sbjct: 122 RDALPKSIDWRKEGYVTRVREQGKCKSCWAFPVAGAIEGQMFKKTGKLTPLSVQNLVDCS 181

Query: 154 QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITL 213
           +   N+GC GG    AF+Y+  NGGL++E  YPY GK+G+CK++ +N   ++   V +  
Sbjct: 182 KPQGNKGCRGGTTYNAFQYVLQNGGLESEATYPYKGKEGLCKYNPKNAYAKITRFVALP- 240

Query: 214 GAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE- 271
             ED L  A+    PV+    VV    RFYK G+Y   KC N    VNHAV+ VGYG E 
Sbjct: 241 EDEDVLMDALATKGPVAAGIHVVYSSLRFYKKGIYHEPKCNNR---VNHAVLVVGYGFEG 297

Query: 272 ---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
              DG  YWLIKNSWG+ WG  GY K+   + N CGIAT A YP+V
Sbjct: 298 NETDGNNYWLIKNSWGKQWGLKGYMKIAKDRNNHCGIATFAQYPIV 343


>gi|281352890|gb|EFB28474.1| hypothetical protein PANDA_008012 [Ailuropoda melanoleuca]
          Length = 328

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 127/208 (61%), Gaps = 6/208 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPS 167
           ++ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  +
Sbjct: 124 VTKVKYQGACGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 183

Query: 168 QAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           +AF+YI  N G+D+E +YPY   DG C++ S+N          +  G+ED+L+ AV    
Sbjct: 184 EAFQYIIDNNGIDSEASYPYKATDGKCRYDSKNRAATCSKYTELPSGSEDDLKEAVANKG 243

Query: 228 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGEN 286
           PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N
Sbjct: 244 PVSVAIDARHSSFFLYRSGVYYDPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLN 300

Query: 287 WGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +GD GY +M     N CGIA+  SYP +
Sbjct: 301 FGDQGYIRMARNSGNHCGIASYPSYPEI 328


>gi|54020916|ref|NP_001005702.1| cathepsin K (pycnodysostosis) precursor [Xenopus (Silurana)
           tropicalis]
 gi|49671274|gb|AAH75275.1| cathepsin K (pycnodysostosis) [Xenopus (Silurana) tropicalis]
          Length = 329

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 6/215 (2%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + YR    ++PV +QG CGSCW FS+ G+LE    +  GK +SLS Q LVDC    +N G
Sbjct: 119 IDYRKKGYVTPVHNQGICGSCWAFSSVGALEGQLMKKTGKLVSLSPQNLVDCDT--DNYG 176

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C GG  + AF Y++ NGG+D++  YPY G+D  C ++  +          I +G+E  L+
Sbjct: 177 CEGGYMTNAFGYVRDNGGIDSDAEYPYVGQDEGCHYNPADKAATCKGYKEIPVGSEKALK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLI 279
            AV  V PVSV+ +  +  F+FYK GVY  + C   P  VNHAV+ VGYG E G+ +W+I
Sbjct: 237 RAVANVGPVSVSIDASLPSFQFYKKGVYYDSSC--NPDAVNHAVLVVGYGNEKGIKHWII 294

Query: 280 KNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 313
           KNSWG+ WG  GY  +    KN CGIA+ AS+PV+
Sbjct: 295 KNSWGDWWGKKGYVLLARDKKNACGIASLASFPVM 329


>gi|328872971|gb|EGG21338.1| cysteine proteinase 5 precursor [Dictyostelium fasciculatum]
          Length = 358

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 154/334 (46%), Gaps = 85/334 (25%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           SF  + +++ + Y S  E   R++ + KN+D +   N KG    LGLN            
Sbjct: 29  SFTNWMQKHSRSYAS-HEFNTRYSVYKKNMDYVNEWNSKGSETVLGLNSLADMTNQEYQA 87

Query: 109 ----------------------------------------ISPVKDQGHCGSCWTFSTTG 128
                                                   ++ VK+QG CGSCW+FS TG
Sbjct: 88  IYLGTKTDATARLAAASASASFGKVQGALPASIDWVAQGAVTQVKNQGQCGSCWSFSATG 147

Query: 129 SLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188
           S E A+  +    ++LSEQ L+DC+ ++ N GCNGGL   AF+YI  NGG+DTE +YPY 
Sbjct: 148 STEGAHQISTSNLVALSEQNLIDCSSSYGNDGCNGGLMDNAFKYIIANGGIDTEASYPYV 207

Query: 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVY 247
            K   CK++  N G  +   V++T G+E  LQ    +  PVSVA +     F+ Y SGVY
Sbjct: 208 AKVQKCKYNPANSGATLSSYVDVTSGSESALQSQT-VKGPVSVAIDASHQSFQLYDSGVY 266

Query: 248 SSTKCGNTPMDVNHAVVAVGYGV---------------------------EDGVPYWLIK 280
               C +T +D  H V+ VGYG                              G  +W +K
Sbjct: 267 YEPACSSTNLD--HGVLVVGYGTASANGSSDSDSSAASQSSSSESSDDQATQGAQFWKVK 324

Query: 281 NSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           NSWG  WG  GY +M   + N CGIAT AS P+V
Sbjct: 325 NSWGPEWGLSGYIQMARNRDNNCGIATTASQPIV 358


>gi|2239107|emb|CAA70693.1| cathepsin L-like cysteine proteinase [Heterodera glycines]
          Length = 374

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++ VK+QG CGSCW FS TG+LE  + +  G  +SLSEQ L+DC++ + N GCNGG+   
Sbjct: 168 VTEVKNQGMCGSCWAFSATGALEGQHVRDKGHLVSLSEQNLIDCSKKYGNMGCNGGIMDN 227

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR 227
           AF+YIK N G+D E AYPY  K G  C F   +VG       +I  G E++L+ AV    
Sbjct: 228 AFQYIKDNKGIDKETAYPYKAKTGKKCLFKRNDVGATDSGYNDIAEGDEEDLKMAVATQG 287

Query: 228 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGE 285
           PVSVA +     F+ Y +GVY   +C   P +++H V+ VGYG +     YW++KNSWG 
Sbjct: 288 PVSVAIDAGHRSFQLYTNGVYFEKEC--DPENLDHGVLVVGYGTDPTQGDYWIVKNSWGT 345

Query: 286 NWGDHGYFKMEMGK-NMCGIATCASYPVV 313
            WG+ GY +M   + N CGIA+ AS+P+V
Sbjct: 346 RWGEQGYIRMARNRNNNCGIASHASFPLV 374


>gi|291383484|ref|XP_002708316.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 9/211 (4%)

Query: 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168
           ++PVK QG CGSCW FS TG+LE    +  G+ +SLSEQ L+DC+    N GC GGL   
Sbjct: 126 VTPVKKQGRCGSCWAFSATGALEGQMFRKTGRLVSLSEQNLIDCSWPAGNHGCRGGLTDH 185

Query: 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRP 228
           AF+Y+K NGGLD+E++YPY  ++  C++  +         V I    E+ L  AV  V P
Sbjct: 186 AFQYVKDNGGLDSEDSYPYEARNLPCRYDPQKSVANGTGFVRIPR-QENALMEAVATVGP 244

Query: 229 VSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW 283
           ++VA +     F+FYK G+Y    C +     NHAV+ VGYG E    D   YWL+KNSW
Sbjct: 245 IAVAIDAGHPSFQFYKEGIYYEPNCSSK--HHNHAVLVVGYGYEGAESDSNKYWLVKNSW 302

Query: 284 GENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           G+ WG+ GY ++   + N CGIA+ ASYP V
Sbjct: 303 GKRWGEAGYIRIAKDRNNHCGIASHASYPTV 333


>gi|356515036|ref|XP_003526207.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 336

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 156/321 (48%), Gaps = 63/321 (19%)

Query: 49  VLQVIGQARHALSF----ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG-LSY 103
           + QV+ +  H  S      ++   YGK+Y+   E   RF  F  N++ I S N  G   Y
Sbjct: 21  ISQVMCRKLHETSMRERHEQWMTEYGKVYKDAAEKDKRFQIFKDNVEFIESFNADGNKPY 80

Query: 104 RLGLN-----------------------------------------------ISPVKDQG 116
           +LG+N                                               ++P+KDQG
Sbjct: 81  KLGVNHLADLTVEEFKASRNGFKRPHEFSTTTFKYENVTAIPAAIDWRTKGAVTPIKDQG 140

Query: 117 HCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYN 176
            CGSCW FST  + E  +    GK +SLSEQ+LVDC     +QGC GG     FE+I  N
Sbjct: 141 QCGSCWAFSTIAATEGIHQITTGKLVSLSEQELVDCDTKGVDQGCEGGYMEDGFEFIIKN 200

Query: 177 GGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV 236
           GG+ +E  YPY   DG C  ++  V  Q+     +   +E  LQ AV   +PVSV+ +  
Sbjct: 201 GGITSETNYPYKAVDGKCNKATSPV-AQIKGYEKVPPNSETALQKAVA-NQPVSVSIDAD 258

Query: 237 D-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM 295
             GF FY SG+Y+  +CG    +++H V AVGYG  +G  YW++KNSWG  WG+ GY +M
Sbjct: 259 GAGFMFYSSGIYNG-ECGT---ELDHGVTAVGYGTANGTDYWIVKNSWGTQWGEKGYVRM 314

Query: 296 EMG----KNMCGIATCASYPV 312
           + G      +CGIA  +SYP 
Sbjct: 315 QRGIAAKHGLCGIALDSSYPT 335


>gi|225456820|ref|XP_002278323.1| PREDICTED: vignain [Vitis vinifera]
          Length = 360

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 99/219 (45%), Positives = 135/219 (61%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+KDQG CGSCW FST  ++E   H    K +SLSEQ+LVDC  +  NQG
Sbjct: 130 VDWRKKGAVTPIKDQGQCGSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDTS-ENQG 188

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLD-SVNITLGAEDEL 219
           CNGGL   AFE+IK  GG+ TE++YPYT +DG C  S  N  V  +D    +    ED L
Sbjct: 189 CNGGLMGYAFEFIKEKGGITTEQSYPYTAEDGTCDVSKVNSPVVSIDGHETVPPNNEDAL 248

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYW 277
             A    +P+SVA +     F+FY  GV++  +CG    D++H V  VGYG   DG  YW
Sbjct: 249 LKAAA-NQPISVAIDAGGSAFQFYSEGVFAG-RCG---TDLDHGVAIVGYGTTLDGTKYW 303

Query: 278 LIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           ++KNSWG +WG++GY +M+ G    + +CGIA  ASYP+
Sbjct: 304 IVKNSWGTDWGENGYIRMKRGISAKEGLCGIAVEASYPI 342


>gi|27960477|gb|AAO27843.1|AF456459_1 cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 9/221 (4%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           K + +R    ++PV+ QG+C +CW FS TG++EA      GK I LS Q LVDC+++  N
Sbjct: 117 KFVDWRKKGYVTPVRRQGNCNACWAFSVTGAIEAQTIWQTGKLIPLSVQNLVDCSKSQGN 176

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDE 218
           +GC  G P  A+EY+  NGGL+ E  YPY GK+GVC+++ ++   ++   V++   +ED 
Sbjct: 177 EGCQWGDPHIAYEYVLNNGGLEAEATYPYKGKEGVCRYNPKHSKAEITGFVSLP-ESEDI 235

Query: 219 LQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DG 273
           L  AV  + P+SVA +   + F FYK G+Y    C N    VNH+V+ VGYG E    DG
Sbjct: 236 LMEAVATIGPISVAVDASFNSFGFYKKGLYDEPNCSNN--TVNHSVLVVGYGFEGNETDG 293

Query: 274 VPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
             YWLIKNSWG  WG  GY K+   + N C IA+ A YP V
Sbjct: 294 NSYWLIKNSWGRKWGLRGYMKIPKDQNNFCAIASYAHYPTV 334


>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens]
          Length = 343

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 158/307 (51%), Gaps = 63/307 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS--YRLGLN------------- 108
           ++   YGK+Y++ +E + R   F++NL  I ++N  G +  Y+LG+N             
Sbjct: 41  QWMTHYGKVYKNPQEREKRLRIFTENLKYIEASNNAGNNKPYKLGINQFADLTNEEFIAS 100

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVK+QG CG CW FS   + E 
Sbjct: 101 RNKFKGHMCSSIIRTTTFKYENTSVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEG 160

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            +  + GK +SLSEQ+LVDC     +QGC GGL   AF++I  N G+ TE  YPY G DG
Sbjct: 161 IHKISTGKLVSLSEQELVDCDTNGVDQGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDG 220

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            CK +  +     +    ++    E+ LQ AV   +P+SVA +     F+FYKSGV++ +
Sbjct: 221 TCKANEASTSAATITGYEDVPANNENALQKAVA-NQPISVAIDASGSDFQFYKSGVFTGS 279

Query: 251 KCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIA 305
            CG    +++H V AVGYG+  DG  YWL+KNSWG +WG+ GY +M+      + +CGIA
Sbjct: 280 -CG---TELDHGVTAVGYGISNDGTKYWLVKNSWGTDWGEEGYIRMQRSIDAAEGLCGIA 335

Query: 306 TCASYPV 312
             ASYP 
Sbjct: 336 MQASYPT 342


>gi|71897043|ref|NP_001026516.1| cathepsin S precursor [Gallus gallus]
 gi|53126701|emb|CAG30977.1| hypothetical protein RCJMB04_1f23 [Gallus gallus]
          Length = 328

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 160/320 (50%), Gaps = 57/320 (17%)

Query: 48  SVLQVIGQARHALS--FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL- 101
           +++ V+G     L   +  + + +GK Y    E   R AT+ KNL L+   N +   GL 
Sbjct: 12  TLVAVMGHPDPTLDQHWQLWKKAHGKEYRHQAEEGQRRATWEKNLRLVMLHNLEHSLGLH 71

Query: 102 SYRLGLN----------------------------------------------ISPVKDQ 115
           SY+LG+N                                              ++ VK+Q
Sbjct: 72  SYQLGMNHMGDMTSEDVAALLTGLRVPYGHNQTSTYRRRGGAPDAMDWREKGCVTEVKNQ 131

Query: 116 GHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKY 175
           G CG+CW FS  G+LEA      GK +SLS Q LVDC+  + N+GC GG  ++AF+YI  
Sbjct: 132 GACGACWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSMMYGNKGCGGGFMTRAFQYIID 191

Query: 176 NGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV 235
           N G+D+EE+YPY  ++G C+++           V +    E  L+ AV  V PVSVA + 
Sbjct: 192 NNGIDSEESYPYMAQNGTCQYNVSTRAATCSKYVELPYADEAALKDAVANVGPVSVAIDA 251

Query: 236 VD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFK 294
               F  Y+SGVY   +C     +VNH V+ VGYG  +   +WL+KNSWGE +GD GY +
Sbjct: 252 TQPTFFLYRSGVYDDPRC---TQEVNHGVLVVGYGTLNEKDFWLVKNSWGERFGDGGYIR 308

Query: 295 MEMGK-NMCGIATCASYPVV 313
           M     N CGIA+ ASYP +
Sbjct: 309 MSRNHANHCGIASYASYPQI 328


>gi|156554010|ref|XP_001605879.1| PREDICTED: counting factor associated protein D-like [Nasonia
           vitripennis]
          Length = 553

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 164/346 (47%), Gaps = 58/346 (16%)

Query: 22  SASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKL 81
           +AS  SF      R+ + + +++F  +      QA   ++F RF + + K Y    E K 
Sbjct: 213 NASCVSFPGPGEHRIYTFNPMKEFIHN-----HQAHVDMAFDRFKKTHNKNYAHDLEHKQ 267

Query: 82  RFATFSKNLDLIRSTNCKGLSYRLGLN--------------------------------- 108
           R   F  NL  I S N   L + L +N                                 
Sbjct: 268 RKEHFRHNLRFIHSINRANLGFTLDVNHLADRNEAELKVLRGKQYTQHGYNGGMPFPHDV 327

Query: 109 ------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLV 150
                             ++PVKDQ  CGSCW+F TTG++E AY   + K + LS+Q L+
Sbjct: 328 EKEKADVPDSFDWRLYGAVTPVKDQSVCGSCWSFGTTGAVEGAYFMKYKKLVRLSQQALI 387

Query: 151 DCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVCKFSSENVGVQVLDSV 209
           DC+  F N GC+GG   +++++I  +GGL TEE Y  Y G+DG C   +     ++   V
Sbjct: 388 DCSWGFGNNGCDGGEDFRSYQWIIKHGGLPTEEEYGGYLGQDGYCHIKNVTQIAKLKGFV 447

Query: 210 NITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268
           N+     D ++ A+    P+SVA +     F FY +GVY    CGNT   ++HAV+AVGY
Sbjct: 448 NVDTNNVDAMKLALFKHGPISVAIDASHKTFSFYSNGVYYEPACGNTENSLDHAVLAVGY 507

Query: 269 GVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314
           G  +G  +WLIKNSW   WG+ GY  M    N CG+ T  +Y + A
Sbjct: 508 GTINGKGFWLIKNSWSNYWGNDGYILMAQKNNNCGVMTAPTYAIAA 553


>gi|62320725|dbj|BAD95392.1| cysteine proteinase RD21A [Arabidopsis thaliana]
          Length = 433

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/359 (34%), Positives = 174/359 (48%), Gaps = 74/359 (20%)

Query: 12  ILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGK 71
           IL L   A +SA   S    +    VS+ G R  E  V+ +         +  +  ++GK
Sbjct: 10  ILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRS-EAEVMSI---------YEAWLVKHGK 59

Query: 72  IY--ESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN--------------------- 108
                S+ E   RF  F  NL  +   N K LSYRLGL                      
Sbjct: 60  AQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEK 119

Query: 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG 139
                                        ++ VKDQG CGSCW FST G++E       G
Sbjct: 120 KGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTG 179

Query: 140 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE 199
             I+LSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DT++ YPY G DG C    +
Sbjct: 180 DLITLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRK 238

Query: 200 NVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPM 257
           N  V  +DS  ++   +E+ L+ AV   +P+S+A E     F+ Y SG++  + CG    
Sbjct: 239 NAKVVTIDSYEDVPTYSEESLKKAVAH-QPISIAIEAGGRAFQLYDSGIFDGS-CGTQ-- 294

Query: 258 DVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
            ++H VVAVGYG E+G  YW+++NSWG++WG+ GY +M          CGIA   SYP+
Sbjct: 295 -LDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPI 352


>gi|297733654|emb|CBI14901.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/219 (45%), Positives = 135/219 (61%), Gaps = 13/219 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++P+KDQG CGSCW FST  ++E   H    K +SLSEQ+LVDC  +  NQG
Sbjct: 43  VDWRKKGAVTPIKDQGQCGSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDTS-ENQG 101

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS-VNITLGAEDEL 219
           CNGGL   AFE+IK  GG+ TE++YPYT +DG C  S  N  V  +D    +    ED L
Sbjct: 102 CNGGLMGYAFEFIKEKGGITTEQSYPYTAEDGTCDVSKVNSPVVSIDGHETVPPNNEDAL 161

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYW 277
             A    +P+SVA +     F+FY  GV++  +CG    D++H V  VGYG   DG  YW
Sbjct: 162 LKAAAN-QPISVAIDAGGSAFQFYSEGVFAG-RCG---TDLDHGVAIVGYGTTLDGTKYW 216

Query: 278 LIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           ++KNSWG +WG++GY +M+ G    + +CGIA  ASYP+
Sbjct: 217 IVKNSWGTDWGENGYIRMKRGISAKEGLCGIAVEASYPI 255


>gi|157128512|ref|XP_001661463.1| cathepsin l [Aedes aegypti]
 gi|91992510|gb|ABE72971.1| cathepsin L [Aedes aegypti]
 gi|108872552|gb|EAT36777.1| AAEL011167-PA [Aedes aegypti]
          Length = 327

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 131/223 (58%), Gaps = 8/223 (3%)

Query: 95  STNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 154
           +T    + +R    ++PVKDQG CGSC+ FS  G+LE A     GK ++LSEQ +VDC  
Sbjct: 109 TTTVTSIDWRTKGAVTPVKDQGRCGSCYAFSALGALEGATFTKTGKLVNLSEQNIVDCTS 168

Query: 155 AFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITL 213
            + N GCNGG  +  F+YIK N G+DT   YPY       C F+   VG    D+  + L
Sbjct: 169 TYGNYGCNGGSMTSVFKYIKTNNGVDTGAFYPYKAAVAATCGFNPAYVG--ATDTGYVLL 226

Query: 214 GA-EDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE 271
            A E  LQ AV  + PVSVA +  +  F+ YKSG+Y    C ++ +  NH V+ VGYG E
Sbjct: 227 PANETALQTAVANIGPVSVAIDASNPSFQQYKSGIYYEPLCSSSKL--NHGVLVVGYGTE 284

Query: 272 DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313
           +G  YW +KNSWG  WG+ GY KM   K N CGIA+ ASYP V
Sbjct: 285 NGTDYWQVKNSWGTTWGEKGYIKMARNKNNHCGIASFASYPTV 327


>gi|393906608|gb|EFO21301.2| ctsf protein [Loa loa]
          Length = 472

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 136/226 (60%), Gaps = 4/226 (1%)

Query: 88  KNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQ 147
           K  +L  +   +   +R    ++PVK+QG CGSCW FS TG++E  +    GK ISLSEQ
Sbjct: 250 KKFNLTFNNLPEQFDWRTKGVVTPVKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQ 309

Query: 148 QLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLD 207
           +L+DC +   ++GCNGGLP  AF  I+  GGL+ E+ YPY  ++G C      + V + D
Sbjct: 310 ELIDCDRI--DKGCNGGLPINAFREIQRMGGLEPEDQYPYKARNGTCHLIRSAIAVTIDD 367

Query: 208 SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           +V I    E  ++  +    P+SV  +      +YKSG+   ++    P  ++H V+  G
Sbjct: 368 AVEIPRN-ETVMKAWIVQRGPLSVGIDA-KLLAYYKSGILHPSRSRCPPSGIDHGVLITG 425

Query: 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           YGVE+G+PYW IKNSWG+ WG+ GYF++ +GK++CG++   S  ++
Sbjct: 426 YGVENGLPYWTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSSAII 471


>gi|37780051|gb|AAP32198.1| cysteine protease 12 [Trifolium repens]
          Length = 343

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 157/307 (51%), Gaps = 63/307 (20%)

Query: 64  RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG--LSYRLGLN------------- 108
           ++   YGK+Y++ +E + R   F++NL  I ++N  G    Y+LG+N             
Sbjct: 41  QWMTHYGKVYKNPQEREKRLRIFTENLKYIEASNNAGNKKPYKLGINQFADLTNEEFIAS 100

Query: 109 ------------------------------------ISPVKDQGHCGSCWTFSTTGSLEA 132
                                               ++PVK+QG CG CW FS   + E 
Sbjct: 101 RNKFKGHMCSSIIRTTTFKYENTSVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEG 160

Query: 133 AYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG 192
            +  + GK +SLSEQ+LVDC     +QGC GGL   AF++I  N G+ TE  YPY G DG
Sbjct: 161 IHKISTGKLVSLSEQELVDCDTNGVDQGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDG 220

Query: 193 VCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSST 250
            CK +  +     +    ++    E+ LQ AV   +P+SVA +     F+FYKSGV++ +
Sbjct: 221 TCKANEASTSAATITGYEDVPANNENALQKAVA-NQPISVAIDASGSDFQFYKSGVFTGS 279

Query: 251 KCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEM----GKNMCGIA 305
            CG    +++H V AVGYG+  DG  YWL+KNSWG +WG+ GY +M+      + +CGIA
Sbjct: 280 -CG---TELDHGVTAVGYGISNDGTKYWLVKNSWGTDWGEEGYIRMQRSIDAAEGLCGIA 335

Query: 306 TCASYPV 312
             ASYP 
Sbjct: 336 MQASYPT 342


>gi|50355613|dbj|BAD29955.1| cysteine protease [Daucus carota]
          Length = 365

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 157/317 (49%), Gaps = 61/317 (19%)

Query: 53  IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN-CKGLSYRLGLN--- 108
           + +A    +  ++  RYG++Y++  E   R   F +NL  I++ N      Y+LG+N   
Sbjct: 30  LNEASMTETHDQWMARYGRVYKTANEKNRRSTIFQENLKYIQTFNKANNKPYKLGVNEFA 89

Query: 109 ---------------------------------------------ISPVKDQGHCGSCWT 123
                                                        ++P+K+QG CG CW 
Sbjct: 90  DLTNEEFTTSRNKFKSHVCATVTNVFRYENVTAVPATMDWRKKGAVTPIKNQGQCGCCWA 149

Query: 124 FSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEE 183
           FS   ++E       GK ISLSEQ+LVDC     +QGC GGL   AF++I+ N GL TE 
Sbjct: 150 FSAVAAMEGITQLKTGKLISLSEQELVDCDTNGEDQGCEGGLMDYAFDFIQQNHGLSTET 209

Query: 184 AYPYTGKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRF 241
            YPY+G DG C  + E N    +    ++   +E  L  AV   +P+SVA +     F+F
Sbjct: 210 NYPYSGTDGTCNANKEANHAATITGHEDVPANSESALLKAVA-NQPISVAIDASGSDFQF 268

Query: 242 YKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG-- 298
           Y SGV++  +CG    +++H V AVGYG   DG  YWL+KNSWG +WG+ GY +M+ G  
Sbjct: 269 YSSGVFTG-ECGT---ELDHGVTAVGYGTAADGTKYWLVKNSWGTSWGEEGYIQMQRGVA 324

Query: 299 --KNMCGIATCASYPVV 313
             + +CGIA  ASYP  
Sbjct: 325 AAEGLCGIAMQASYPTA 341


>gi|149030666|gb|EDL85703.1| cathepsin S [Rattus norvegicus]
          Length = 291

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 143/257 (55%), Gaps = 13/257 (5%)

Query: 65  FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNISPVKDQGHCGS 120
           + + + K Y+   E  +R   + KNL  I   N +   G+ SY +G+N   + D G CGS
Sbjct: 40  WKKTHEKEYKDQNEEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMN--HMGDMGSCGS 97

Query: 121 CWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGG 178
           CW FS  G+LE       GK +SLS Q LVDC+  + + N+GC GG  ++AF+YI  NGG
Sbjct: 98  CWAFSAVGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDNGG 157

Query: 179 LDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-D 237
           +D+E +YPY   D  C +  +N        + +  G E+ L+ AV    PVSV  +    
Sbjct: 158 IDSEASYPYKAMDEKCHYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDASHS 217

Query: 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-E 296
            F  Y+SGVY    C     +VNH V+ VGYG  DG  YWL+KNSWG ++GD GY +M  
Sbjct: 218 SFFLYQSGVYDDPSCTE---NVNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMAR 274

Query: 297 MGKNMCGIATCASYPVV 313
             KN CGIA+  SYP +
Sbjct: 275 NNKNHCGIASYCSYPEI 291


>gi|326430129|gb|EGD75699.1| hypothetical protein PTSG_07816 [Salpingoeca sp. ATCC 50818]
          Length = 545

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 152/301 (50%), Gaps = 48/301 (15%)

Query: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------ 108
           +F  F  ++G++YE+ +E   R   F  N   + + N + L+Y L LN            
Sbjct: 245 AFDSFKAQHGRMYETEQEHAKRLNNFRHNKKFVDAMNRRNLTYTLALNHLADLHDEERAQ 304

Query: 109 ---------------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYH 135
                                            ++ VKDQG CGSCW+F    ++E  Y 
Sbjct: 305 MRGTFSSRTDYAYVAETPSPVRSAARDWRTTGAVTGVKDQGICGSCWSFGAAQAIEGQYF 364

Query: 136 QAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY-PYTGKDGVC 194
            A  + + +S+Q L+DC+  F N  C+GG   +A+E++  NG + TE +Y PY   DG C
Sbjct: 365 LATNRTVPMSQQALMDCSWGFGNNACDGGEAFRAYEWVLQNGYIPTEASYGPYLMADGYC 424

Query: 195 KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCG 253
                + G  +   VNIT G  +++   +    P++VA +  +  F FY SGVY  + CG
Sbjct: 425 HPEKADKGPGIKGYVNITSGDMNKVLDMLDNDGPLAVAIDASLKSFSFYSSGVYYDSDCG 484

Query: 254 NTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312
           NTP D++HAV+AVG+G   DG  YW+IKNSW  N+GD GY +M    N CG+AT A  P+
Sbjct: 485 NTPDDLDHAVLAVGFGTSVDGEDYWIIKNSWSTNYGDRGYVRMSRRNNNCGVATDAHIPL 544

Query: 313 V 313
           +
Sbjct: 545 L 545


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 158/310 (50%), Gaps = 65/310 (20%)

Query: 62  FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------- 108
           F ++  R+ ++Y S+ E + RF  F  NL  I + N +  SY LGLN             
Sbjct: 52  FHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHNKQEKSYWLGLNKFSDLTHDEFRAL 111

Query: 109 -------------------------------------ISPVKDQGHCGSCWTFSTTGSLE 131
                                                +S VKDQG CGSCW FS  GS+E
Sbjct: 112 YLGIRPAGRAHGLRNGDRFIYEDVVAEEMVDWRKKGAVSDVKDQGSCGSCWAFSAIGSVE 171

Query: 132 AAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 191
                  G+ ISLSEQ+LVDC +   NQGCNGGL   AF++I  NGG+DTEE YPY   D
Sbjct: 172 GVNAIVTGELISLSEQELVDCDRG-QNQGCNGGLMDYAFDFIIKNGGIDTEEDYPYKATD 230

Query: 192 GVC-KFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYS 248
           G C +   E   V V+D   ++   +E  L  AV    PVSVA E     F+ Y+ GV++
Sbjct: 231 GQCDEARKETSKVVVIDDYQDVPTKSESSLLKAVSK-NPVSVAIEAGGRDFQHYQGGVFT 289

Query: 249 STKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKME-MGKN----MC 302
              CG    D++H V+AVGYG  +DGV YW++KNSWG +WG+ GY +ME MG N     C
Sbjct: 290 GP-CGT---DLDHGVLAVGYGTDDDGVNYWIVKNSWGPSWGEKGYIRMERMGSNSTSGKC 345

Query: 303 GIATCASYPV 312
           GI    S+P+
Sbjct: 346 GINIEPSFPI 355


>gi|312080834|ref|XP_003142769.1| ctsf protein [Loa loa]
          Length = 437

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 136/226 (60%), Gaps = 4/226 (1%)

Query: 88  KNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQ 147
           K  +L  +   +   +R    ++PVK+QG CGSCW FS TG++E  +    GK ISLSEQ
Sbjct: 215 KKFNLTFNNLPEQFDWRTKGVVTPVKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQ 274

Query: 148 QLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLD 207
           +L+DC +   ++GCNGGLP  AF  I+  GGL+ E+ YPY  ++G C      + V + D
Sbjct: 275 ELIDCDRI--DKGCNGGLPINAFREIQRMGGLEPEDQYPYKARNGTCHLIRSAIAVTIDD 332

Query: 208 SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267
           +V I    E  ++  +    P+SV  +      +YKSG+   ++    P  ++H V+  G
Sbjct: 333 AVEIPRN-ETVMKAWIVQRGPLSVGIDA-KLLAYYKSGILHPSRSRCPPSGIDHGVLITG 390

Query: 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313
           YGVE+G+PYW IKNSWG+ WG+ GYF++ +GK++CG++   S  ++
Sbjct: 391 YGVENGLPYWTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSSAII 436


>gi|222425026|dbj|BAH20463.1| cysteine protease [Spinacia oleracea]
          Length = 473

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/221 (45%), Positives = 138/221 (62%), Gaps = 13/221 (5%)

Query: 99  KGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNN 158
           + + +R    ++ VKDQG CGSCW FST  ++E       G+ +SLSEQ+LVDC  ++N+
Sbjct: 149 EAVDWRKNGAVAKVKDQGQCGSCWAFSTIAAVEGINQIVTGELLSLSEQELVDCDTSYNS 208

Query: 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAED 217
            GC+GGL   A+E+I  NGG+DT+  YPYT KDG C    +N  V  +D   ++    E 
Sbjct: 209 -GCDGGLMDYAYEFIINNGGIDTDADYPYTAKDGKCDQYRKNAKVVTIDDFEDVPENDEK 267

Query: 218 ELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPY 276
            LQ AV   +PVSVA E     F+FY+SGV++  KCG    D++H VVAVGYG +DG  Y
Sbjct: 268 ALQKAVAH-QPVSVAIEAGGSTFQFYQSGVFTG-KCG---ADLDHGVVAVGYGSDDGKDY 322

Query: 277 WLIKNSWGENWGDHGYFKME-----MGKNMCGIATCASYPV 312
           W+++NSWG +WG+ GY +ME     +    CGIA   SYP+
Sbjct: 323 WIVRNSWGADWGESGYIRMERNLETVKTGKCGIAIEPSYPI 363


>gi|18141281|gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 12/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    + PVKDQG CGSCW FS  G++E       G+ +SLSEQ+LVDC  ++NN G
Sbjct: 127 VDWRAKGAVVPVKDQGSCGSCWAFSAIGAVEGINQIKTGELVSLSEQELVDCDTSYNN-G 185

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTG-KDGVCKFSSENVGVQVLDSVNITLGAEDEL 219
           C GGL   AF++I  NGG+DTEE YPYT   D +C    +N  V  +D        E+ L
Sbjct: 186 CGGGLMDYAFQFIISNGGIDTEEDYPYTATDDNICNTDKKNTRVVTIDGYEDVPENENSL 245

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           + A+   +P+SVA E    GF+ YKSGV++ T CG     ++H VVAVGYG  +G  YW+
Sbjct: 246 KKALA-NQPISVAIEAGGRGFQLYKSGVFTGT-CGTA---LDHGVVAVGYGTSEGQDYWI 300

Query: 279 IKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 312
           I+NSWG NWG+ GY K++         CG+A  ASYP 
Sbjct: 301 IRNSWGSNWGESGYIKLQRNIKDSSGKCGVAMMASYPT 338


>gi|355681656|gb|AER96815.1| Cathepsin L precursor [Mustela putorius furo]
          Length = 331

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/217 (43%), Positives = 132/217 (60%), Gaps = 9/217 (4%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS TG+LE    +   + +SLSEQ LVDC+QA  N+G
Sbjct: 118 VDWRKKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTKRLVSLSEQNLVDCSQAEGNEG 177

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQ 220
           C+GGL   AF+Y+K NGGLD+EE+YPY  +D  CK+  E         ++I    E+ L+
Sbjct: 178 CSGGLMDYAFQYVKDNGGLDSEESYPYRAQDESCKYKPEQSAANDTGFMDIHP-EEESLK 236

Query: 221 HAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVP 275
            AV  V P+S A +  +  F+FY  G+Y    C +  +D  H ++ VGYG +    +   
Sbjct: 237 LAVATVGPISAAIDASLSTFQFYHKGIYYDPDCSSENLD--HGILVVGYGSQGEDSEKQK 294

Query: 276 YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 311
           YW++KNSWG +WG  GY  M   + N CGIAT AS+P
Sbjct: 295 YWIVKNSWGTDWGTQGYILMAKDRDNHCGIATAASFP 331


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 131/218 (60%), Gaps = 11/218 (5%)

Query: 101 LSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 160
           + +R    ++PVK+QG CGSCW FS   S+E+      G+ ++LSEQ+LV+C+    N G
Sbjct: 146 VDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSG 205

Query: 161 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDEL 219
           CNGGL   AF++I  NGG+DTE  YPY   DG C  + EN  V  +D   ++    E  L
Sbjct: 206 CNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSL 265

Query: 220 QHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 278
           Q AV   +PVSVA E     F+ YK+GV++    G    +++H VVAVGYG E+G  YW+
Sbjct: 266 QKAVAH-QPVSVAIEAGGREFQLYKAGVFT----GTCTTNLDHGVVAVGYGTENGKDYWI 320

Query: 279 IKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPV 312
           ++NSWG  WG+ GY +ME   N     CGIA  ASYP 
Sbjct: 321 VRNSWGAKWGEDGYIRMERNVNATTGKCGIAMMASYPT 358


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.134    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,938,835,519
Number of Sequences: 23463169
Number of extensions: 210110348
Number of successful extensions: 473620
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6645
Number of HSP's successfully gapped in prelim test: 1088
Number of HSP's that attempted gapping in prelim test: 447257
Number of HSP's gapped (non-prelim): 11084
length of query: 314
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 172
effective length of database: 9,027,425,369
effective search space: 1552717163468
effective search space used: 1552717163468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)