Query 036910
Match_columns 314
No_of_seqs 317 out of 1768
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:48:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036910.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036910hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qt4_A Cathepsin-L-like midgut 100.0 1.3E-75 4.5E-80 541.7 27.3 252 59-313 24-329 (329)
2 3qj3_A Cathepsin L-like protei 100.0 2.6E-75 9E-80 540.9 26.9 251 59-313 19-331 (331)
3 2c0y_A Procathepsin S; proenzy 100.0 1E-74 3.5E-79 534.1 24.3 252 59-313 9-315 (315)
4 2o6x_A Procathepsin L1, secret 100.0 5.5E-74 1.9E-78 528.1 25.2 250 60-313 3-306 (310)
5 1by8_A Protein (procathepsin K 100.0 2.9E-74 9.9E-79 530.9 23.1 250 60-313 9-314 (314)
6 1cs8_A Human procathepsin L; p 100.0 5.2E-74 1.8E-78 529.6 23.2 250 60-313 10-316 (316)
7 1pci_A Procaricain; zymogen, h 100.0 1.7E-72 5.7E-77 520.5 25.1 247 59-313 19-321 (322)
8 3tnx_A Papain; hydrolase, cyto 100.0 3.5E-71 1.2E-75 516.3 27.7 244 58-313 62-362 (363)
9 1xkg_A DER P I, major mite fec 100.0 5.6E-70 1.9E-74 501.0 25.8 244 61-313 7-302 (312)
10 8pch_A Cathepsin H; hydrolase, 100.0 2.5E-65 8.5E-70 450.0 22.0 205 109-313 14-218 (220)
11 3kwz_A Cathepsin K; enzyme inh 100.0 1.5E-64 5.1E-69 443.6 21.4 201 109-313 13-215 (215)
12 3ovx_A Cathepsin S; hydrolase, 100.0 2.1E-64 7.1E-69 443.5 21.1 202 109-313 14-218 (218)
13 2xu3_A Cathepsin L1; hydrolase 100.0 6.6E-64 2.3E-68 440.8 22.0 202 109-313 13-220 (220)
14 3pdf_A Cathepsin C, dipeptidyl 100.0 1.4E-63 4.7E-68 476.4 22.6 201 109-312 222-434 (441)
15 1m6d_A Cathepsin F, catsf; pap 100.0 2E-63 6.8E-68 436.0 20.4 199 109-313 13-213 (214)
16 3i06_A Cruzipain; autocatalyti 100.0 9.7E-63 3.3E-67 431.9 22.9 198 109-314 13-215 (215)
17 3u8e_A Papain-like cysteine pr 100.0 4.1E-63 1.4E-67 436.3 19.7 201 109-314 13-220 (222)
18 3p5u_A Actinidin; SAD, cystein 100.0 5.6E-63 1.9E-67 434.9 20.4 200 109-313 13-217 (220)
19 2b1m_A SPE31; papain-like, sug 100.0 1.2E-62 4.3E-67 439.2 22.3 201 109-313 14-224 (246)
20 1cqd_A Protein (protease II); 100.0 1.5E-62 5.2E-67 432.3 22.5 198 109-313 15-217 (221)
21 3f5v_A DER P 1 allergen; aller 100.0 7E-63 2.4E-67 435.0 19.8 198 109-313 22-222 (222)
22 1iwd_A Ervatamin B; cysteine p 100.0 2.2E-62 7.4E-67 429.5 22.8 198 109-314 13-215 (215)
23 3f75_A Toxopain-2, cathepsin L 100.0 1.7E-62 5.9E-67 433.1 20.2 200 109-313 19-224 (224)
24 1ppo_A Protease omega; hydrola 100.0 3.2E-62 1.1E-66 428.8 21.4 197 109-313 13-215 (216)
25 1yal_A Chymopapain; hydrolase, 100.0 8.2E-62 2.8E-66 426.8 21.7 197 109-313 13-215 (218)
26 3hhi_A Cathepsin B-like cystei 100.0 6.7E-62 2.3E-66 449.9 20.1 197 109-313 88-312 (325)
27 1o0e_A Ervatamin C; plant cyst 100.0 2.3E-61 7.8E-66 420.9 22.1 193 109-314 13-208 (208)
28 2oul_A Falcipain 2; cysteine p 100.0 2.8E-61 9.4E-66 429.5 23.0 196 109-313 30-240 (241)
29 3bwk_A Cysteine protease falci 100.0 1.8E-61 6.2E-66 431.1 21.0 196 109-313 32-242 (243)
30 2cio_A Papain; hydrolase/inhib 100.0 5.4E-61 1.9E-65 419.8 22.4 193 109-313 13-211 (212)
31 1s4v_A Cysteine endopeptidase; 100.0 3.7E-61 1.3E-65 425.5 20.8 199 109-313 14-219 (229)
32 2fo5_A Cysteine proteinase EP- 100.0 2.7E-61 9.3E-66 433.3 19.4 199 109-313 16-224 (262)
33 2bdz_A Mexicain; cysteine prot 100.0 9.3E-61 3.2E-65 418.8 21.5 193 109-313 13-211 (214)
34 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.1E-60 3.7E-65 418.3 20.7 193 109-313 13-211 (213)
35 3pbh_A Procathepsin B; thiol p 100.0 2.6E-60 8.8E-65 438.4 18.7 199 109-312 80-313 (317)
36 3cbj_A Cathepsin B; cathepsin 100.0 1E-58 3.6E-63 418.7 19.8 200 109-313 23-257 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 6.7E-58 2.3E-62 410.9 21.0 198 109-312 19-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 1.3E-57 4.3E-62 413.4 19.0 196 109-313 51-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 6.2E-56 2.1E-60 400.6 21.3 201 109-312 22-257 (265)
40 3ois_A Cysteine protease; alph 100.0 1.1E-49 3.7E-54 364.1 13.7 190 102-298 60-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 3.1E-43 1.1E-47 334.2 14.0 200 108-313 59-423 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.4E-41 4.7E-46 323.2 15.0 200 108-313 64-424 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 4.6E-38 1.6E-42 293.0 17.5 192 105-298 18-356 (383)
44 3f75_P Toxopain-2, cathepsin L 98.9 1.4E-09 4.7E-14 83.3 6.6 50 59-108 22-71 (106)
45 2l95_A Crammer, LP06209P; cyst 98.8 4.5E-09 1.5E-13 76.6 5.6 48 60-108 8-59 (80)
46 1pxv_A Cysteine protease; hydr 97.4 0.0026 8.8E-08 52.1 12.3 131 113-299 25-163 (183)
47 1x9y_A Cysteine proteinase; ha 97.3 0.0038 1.3E-07 56.4 13.0 129 113-298 201-338 (367)
48 1cv8_A Staphopain; cysteine pr 97.2 0.012 4.1E-07 48.0 13.8 120 113-284 16-144 (174)
49 3erv_A Putative C39-like pepti 90.2 0.86 2.9E-05 39.3 7.6 64 209-283 125-196 (236)
50 3bb7_A Interpain A; cysteine p 53.4 29 0.00098 31.1 6.7 60 217-297 239-298 (321)
51 1dki_A Pyrogenic exotoxin B zy 49.7 37 0.0013 31.0 6.9 56 216-297 289-344 (371)
52 2r9f_A Calpain-1 catalytic sub 47.5 50 0.0017 29.6 7.4 62 216-285 210-275 (339)
53 1ziv_A Calpain 9; cysteine pro 46.2 45 0.0015 30.0 6.9 27 259-285 244-274 (339)
54 4d8b_A Streptopain; papain fol 45.3 39 0.0013 29.3 6.1 56 216-297 171-226 (261)
55 2nqa_A Calpain 8; calpain, cal 39.7 71 0.0024 28.4 7.1 72 217-296 206-307 (326)
56 1th5_A NIFU1; iron-sulfur clus 33.1 21 0.00073 24.6 1.9 28 109-138 37-64 (74)
57 2z79_A Endo-1,4-beta-xylanase 27.0 44 0.0015 27.3 3.1 28 259-287 62-89 (185)
58 3bow_A Calpain-2 catalytic sub 24.0 1.8E+02 0.006 28.8 7.6 72 217-296 226-327 (714)
59 2j4t_A Angiogenin-4; angiogene 22.5 37 0.0013 26.6 1.8 10 61-70 28-37 (144)
No 1
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=1.3e-75 Score=541.71 Aligned_cols=252 Identities=40% Similarity=0.782 Sum_probs=232.3
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc--------------------------
Q 036910 59 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------------------------- 108 (314)
Q Consensus 59 ~~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n-------------------------- 108 (314)
..+|++|+.+|+|.|.+.+|+.+|+.||++|+++|++||++ ..+|++++|
T Consensus 24 ~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~g~~~~~~~~~~~ 103 (329)
T 3qt4_A 24 QEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLAYVNRGKAQKPKHPE 103 (329)
T ss_dssp HHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHHHHHHTCCC------
T ss_pred HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHHhcCCcccccccccc
Confidence 46899999999999999889999999999999999999862 234544433
Q ss_pred -----------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCC
Q 036910 109 -----------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165 (314)
Q Consensus 109 -----------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~ 165 (314)
||||||||.||||||||++++||+++++++|++++||||+|+||+..+++.||+||+
T Consensus 104 ~~~~~~~~~~~~lP~~~DwR~~~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g~~GC~GG~ 183 (329)
T 3qt4_A 104 NLRMPYVSSKKPLAASVDWRSNAVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYGNAGCDGGW 183 (329)
T ss_dssp CCEEECCCCCSCCCSCEECTTTSCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCTTBCCC
T ss_pred cccccccCCccCCCCCEEccccccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999766688999999
Q ss_pred hhhHHHHHHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCc
Q 036910 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSG 245 (314)
Q Consensus 166 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~G 245 (314)
+..|++|+.++ |+++|++|||.+.++.|+.......+++.++..++..++++||++|+.+|||+|+|++.++|++|++|
T Consensus 184 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~G 262 (329)
T 3qt4_A 184 MDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDELQFYSGG 262 (329)
T ss_dssp HHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECCCGGGTTEEEE
T ss_pred hhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEecChhhhhccCc
Confidence 99999999998 99999999999999999988777778889999888778999999999999999999997799999999
Q ss_pred eEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 246 VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 246 i~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
||..+.|... .++|||+|||||+++|++|||||||||++||++|||||+||. |.|||+++++||++
T Consensus 263 Vy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 263 LFYDQTCNQS--DLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYPAL 329 (329)
T ss_dssp EECCSSCCSS--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEEEC
T ss_pred eeecCCCCCC--cCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEeeC
Confidence 9998888642 589999999999999999999999999999999999999998 99999999999986
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=2.6e-75 Score=540.85 Aligned_cols=251 Identities=43% Similarity=0.805 Sum_probs=231.6
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc--------------------------
Q 036910 59 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------------------------- 108 (314)
Q Consensus 59 ~~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n-------------------------- 108 (314)
...|++|+++|+|.|.+.+|+.+|++||++|+++|++||++ ..+|++++|
T Consensus 19 ~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~~~~~ 98 (331)
T 3qj3_A 19 AEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLHKN 98 (331)
T ss_dssp HHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSSTTTT
T ss_pred HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccccccccc
Confidence 47899999999999999899999999999999999999853 334544443
Q ss_pred -----------------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCC--CcccCHHHHHhhhcCCC
Q 036910 109 -----------------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK--GISLSEQQLVDCAQAFN 157 (314)
Q Consensus 109 -----------------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~--~~~lS~q~l~dc~~~~~ 157 (314)
||||||||.||||||||++++||+++++++|+ .++||||+|+||+..
T Consensus 99 ~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~-- 176 (331)
T 3qj3_A 99 GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN-- 176 (331)
T ss_dssp CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTT--
T ss_pred CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccC--
Confidence 89999999999999999999999999999998 999999999999864
Q ss_pred CCCCCCCChhhHHHHHHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecc
Q 036910 158 NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 237 (314)
Q Consensus 158 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~ 237 (314)
+.||+||++..|++|+.+++|+++|++|||.+.++.|+.......+++.++..++..++++||++|+.+|||+|+|++..
T Consensus 177 ~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~ 256 (331)
T 3qj3_A 177 ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDADD 256 (331)
T ss_dssp SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEEEEECCCT
T ss_pred CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEEEEEccc
Confidence 78999999999999999988999999999999999999888777788899999987789999999999999999999976
Q ss_pred cccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 238 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 238 ~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
+|++|++|||..+.|... .++|||+|||||+++|++|||||||||++||++|||||+||. |.|||+++++||++
T Consensus 257 ~f~~Y~~Gvy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~v 331 (331)
T 3qj3_A 257 PFGSYSGGVYYNPTCETN--KFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 331 (331)
T ss_dssp TGGGEEEEEECCTTCCSS--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred ccccccCceEeCCCCCCC--cCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCceeeeeC
Confidence 699999999998888643 589999999999999999999999999999999999999998 99999999999986
No 3
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1e-74 Score=534.12 Aligned_cols=252 Identities=42% Similarity=0.795 Sum_probs=230.1
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc--------------------------
Q 036910 59 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN-------------------------- 108 (314)
Q Consensus 59 ~~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n-------------------------- 108 (314)
...|++|+.+|+|.|.+.+|+.+|+.+|++|+++|++||.. ..+|++++|
T Consensus 9 ~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~ 88 (315)
T 2c0y_A 9 DHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRN 88 (315)
T ss_dssp HHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCGGGSC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCccccCC
Confidence 36799999999999988789999999999999999999953 245666555
Q ss_pred ----------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhh-cCCCCCCCCCCC
Q 036910 109 ----------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGL 165 (314)
Q Consensus 109 ----------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~-~~~~~~gC~GG~ 165 (314)
||||||||.||||||||++++||+++++++|+.++||||+|+||+ ..+++.||+||+
T Consensus 89 ~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~GG~ 168 (315)
T 2c0y_A 89 ITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGF 168 (315)
T ss_dssp BCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCBC
T ss_pred ccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCCCCCCCC
Confidence 899999999999999999999999999999999999999999998 555688999999
Q ss_pred hhhHHHHHHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCC
Q 036910 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKS 244 (314)
Q Consensus 166 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~ 244 (314)
+..|++|+.+++|+++|++|||.+.++.|+.......+++.++..++..++++||++|+++|||+|+|++. ++|++|++
T Consensus 169 ~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~ 248 (315)
T 2c0y_A 169 MTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRS 248 (315)
T ss_dssp HHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEE
T ss_pred HHHHHHHHHHhCCcCchhcCCCccCCCCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhhccCC
Confidence 99999999876799999999999999999987655667788888888778999999999999999999997 68999999
Q ss_pred ceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 245 Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
|||..+.|++ .++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 249 Gvy~~~~c~~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 249 GVYYEPSCTQ---NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 315 (315)
T ss_dssp EEECCTTCCS---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CcccCCCCCC---cCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEeeC
Confidence 9999877875 579999999999999999999999999999999999999995 99999999999985
No 4
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=5.5e-74 Score=528.14 Aligned_cols=250 Identities=44% Similarity=0.852 Sum_probs=227.6
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc---------------------------
Q 036910 60 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------------------------- 108 (314)
Q Consensus 60 ~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n--------------------------- 108 (314)
.+|++|+.+|+|.|.+.+|+.+| .+|++|+++|++||.. ..+|++++|
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 57999999999999988899999 9999999999999853 233443333
Q ss_pred ----------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCCh
Q 036910 109 ----------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLP 166 (314)
Q Consensus 109 ----------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~ 166 (314)
||||||||.||||||||++++||+++++++|+.++||||+|+||+..+++.||+||++
T Consensus 82 ~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG~~ 161 (310)
T 2o6x_A 82 GVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLM 161 (310)
T ss_dssp SEECCC----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCCCH
T ss_pred CCccccccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCCCH
Confidence 8999999999999999999999999999999999999999999986555889999999
Q ss_pred hhHHHHHHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCce
Q 036910 167 SQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGV 246 (314)
Q Consensus 167 ~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi 246 (314)
..|++|+. ++|+++|++|||.+.++.|+.......+++.++..++..++++||++|+.+|||+|+|++.++|++|++||
T Consensus 162 ~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~Y~~Gv 240 (310)
T 2o6x_A 162 ENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI 240 (310)
T ss_dssp HHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHTEEEEE
T ss_pred HHHHHHHH-HCCcCchhcCCCCCCCCCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhhCCCce
Confidence 99999998 56999999999999999999876666788888988887789999999999999999999987999999999
Q ss_pred EecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 247 ~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
|..+.|+.. .++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 241 y~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 241 YQSQTCSPL--RVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp ECCSSCCTT--CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred ecCCCCCCC--CCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 998778743 579999999999999999999999999999999999999997 89999999999996
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=2.9e-74 Score=530.88 Aligned_cols=250 Identities=42% Similarity=0.823 Sum_probs=228.0
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc---------------------------
Q 036910 60 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------------------------- 108 (314)
Q Consensus 60 ~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n--------------------------- 108 (314)
.+|++|+++|+|.|.+.+|+.+|+.+|++|+++|++||.+ ..+|++++|
T Consensus 9 ~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~~ 88 (314)
T 1by8_A 9 THWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSN 88 (314)
T ss_dssp HHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCCCSS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcccccCC
Confidence 5799999999999999899999999999999999999853 134444444
Q ss_pred -----------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCC
Q 036910 109 -----------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGL 165 (314)
Q Consensus 109 -----------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~ 165 (314)
||||||||.||||||||++++||+++++++|+.++||||+|+||+. .+.||+||+
T Consensus 89 ~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~~gC~GG~ 166 (314)
T 1by8_A 89 DTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGY 166 (314)
T ss_dssp SSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--TSCGGGCCC
T ss_pred ccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCcCCC
Confidence 8999999999999999999999999999999999999999999986 578999999
Q ss_pred hhhHHHHHHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCC
Q 036910 166 PSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKS 244 (314)
Q Consensus 166 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~ 244 (314)
+..|++|+.+++|+++|++|||.+.++.|+.......+++.++..++..++++||++|+.+|||+|+|++. ++|++|++
T Consensus 167 ~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~ 246 (314)
T 1by8_A 167 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSK 246 (314)
T ss_dssp SHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEE
T ss_pred HHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhhccC
Confidence 99999999877799999999999999999977655667888888888778999999999999999999996 68999999
Q ss_pred ceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 245 Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
|||..+.|+.. .++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 247 Gvy~~~~c~~~--~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 247 GVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp ECBCCTTCCSS--CCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEECC
T ss_pred ceecCCCCCCC--CCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEeeC
Confidence 99998778752 579999999999999999999999999999999999999995 89999999999985
No 6
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=5.2e-74 Score=529.61 Aligned_cols=250 Identities=44% Similarity=0.861 Sum_probs=227.4
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc---------------------------
Q 036910 60 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN--------------------------- 108 (314)
Q Consensus 60 ~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n--------------------------- 108 (314)
..|++|+++|+|.| +.+|+.+|+.+|++|+++|++||.+ ..+|++++|
T Consensus 10 ~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 88 (316)
T 1cs8_A 10 AQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKV 88 (316)
T ss_dssp HHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSCCEE
T ss_pred HHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccccCcc
Confidence 67999999999999 7788999999999999999999963 345666655
Q ss_pred --------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhh
Q 036910 109 --------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168 (314)
Q Consensus 109 --------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~ 168 (314)
||||||||.||||||||++++||+++++++|+.++||||+|+||+..+++.||+||++..
T Consensus 89 ~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~~~~ 168 (316)
T 1cs8_A 89 FQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDY 168 (316)
T ss_dssp CCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHH
T ss_pred ccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCCCCCHHH
Confidence 899999999999999999999999999999999999999999998755678999999999
Q ss_pred HHHHHHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceE
Q 036910 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVY 247 (314)
Q Consensus 169 a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~ 247 (314)
|++|+.+++|+++|++|||.+.++.|+.......+++.++..++. ++++||++|+++|||+|+|++. ++|++|++|||
T Consensus 169 a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy 247 (316)
T 1cs8_A 169 AFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIY 247 (316)
T ss_dssp HHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEE
T ss_pred HHHHHHHhCCcCchhccCCCCCCCCcCCCCccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChhhccccCceE
Confidence 999998667999999999999999999876656677888888876 8999999999999999999996 58999999999
Q ss_pred ecCCCCCCCCCCCeEEEEEEee---ec-CCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 248 SSTKCGNTPMDVNHAVVAVGYG---VE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 248 ~~~~~~~~~~~~~Hav~iVGyg---~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
..+.|+.. .++|||+||||| ++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 248 ~~~~c~~~--~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 248 FEPDCSSE--DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp CCTTCCSS--CCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred CCCCCCCC--CCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 98778752 589999999999 66 7899999999999999999999999997 89999999999985
No 7
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.7e-72 Score=520.53 Aligned_cols=247 Identities=40% Similarity=0.776 Sum_probs=224.8
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCCCcccccccc------------------------------
Q 036910 59 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN------------------------------ 108 (314)
Q Consensus 59 ~~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~~~~y~l~~n------------------------------ 108 (314)
..+|++|+.+|+|.|.+.+|+.+|+.+|++|+++|++||....+|++++|
T Consensus 19 ~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~~~~~ 98 (322)
T 1pci_A 19 IQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEE 98 (322)
T ss_dssp HHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSCCCCSEE
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcCCCCccccccccccc
Confidence 36799999999999999899999999999999999999976455655554
Q ss_pred --------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhh
Q 036910 109 --------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQ 168 (314)
Q Consensus 109 --------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~ 168 (314)
||||||||.||||||||++++||+++++++|+.++||||+|+||+. .+.||+||++..
T Consensus 99 ~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~~gC~GG~~~~ 176 (322)
T 1pci_A 99 FINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPY 176 (322)
T ss_dssp CCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TSCGGGCBCHHH
T ss_pred cccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CCCCCCCCCHHH
Confidence 8999999999999999999999999999999999999999999985 578999999999
Q ss_pred HHHHHHHcCCcCCCCCCCCCCCCCcccCCCC-CcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCce
Q 036910 169 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGV 246 (314)
Q Consensus 169 a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~-~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi 246 (314)
|++|+.++ |+++|++|||.+.++.|+.... ...+++.++..++..++++|+++|++ |||+|+|++. ++|++|++||
T Consensus 177 a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~Y~~Gv 254 (322)
T 1pci_A 177 ALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGI 254 (322)
T ss_dssp HHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHTEEEEE
T ss_pred HHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHH-CCEEEEEecccccccccCCeE
Confidence 99999988 7999999999999999987643 34567888888887789999999986 9999999996 7899999999
Q ss_pred EecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 247 YSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 247 ~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|.. +|+. .++|||+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 255 y~~-~c~~---~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 255 FEG-PCGT---KVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp ECC-SCCS---CCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred eCC-CCCC---CCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 976 5864 379999999999999999999999999999999999999996 89999999999986
No 8
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=3.5e-71 Score=516.31 Aligned_cols=244 Identities=38% Similarity=0.742 Sum_probs=219.9
Q ss_pred hHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCCCcccccccc-----------------------------
Q 036910 58 HALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN----------------------------- 108 (314)
Q Consensus 58 ~~~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~~~~y~l~~n----------------------------- 108 (314)
...+|++|+.+|+|.|.+.+|+.+|++||++|+++|++||++..+|++++|
T Consensus 62 ~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~~~~~ 141 (363)
T 3tnx_A 62 LIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSY 141 (363)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCSSSSS
T ss_pred HHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhccccccccccccccc
Confidence 457899999999999999999999999999999999999998889999998
Q ss_pred ----------------------cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCCh
Q 036910 109 ----------------------ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLP 166 (314)
Q Consensus 109 ----------------------vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~ 166 (314)
||||||||.||||||||++++||+++++++|+++.||||+|+||+. .+.||+||++
T Consensus 142 ~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~--~~~GC~GG~~ 219 (363)
T 3tnx_A 142 EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYP 219 (363)
T ss_dssp SCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCH
T ss_pred ccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC--CCCCCCCCCh
Confidence 9999999999999999999999999999999999999999999986 4679999999
Q ss_pred hhHHHHHHHcCCcCCCCCCCCCCCCCcccCCC-CCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEe-cccccccCC
Q 036910 167 SQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS-ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKS 244 (314)
Q Consensus 167 ~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~-~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~-~~~f~~y~~ 244 (314)
..|++|+.++ |+++|++|||.+.++.|.... .....++..+..++..++..++.+|. +|||+|++++ .++|++|++
T Consensus 220 ~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~-~gPvsvai~a~~~~F~~Y~s 297 (363)
T 3tnx_A 220 WSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIA-NQPVSVVLEAAGKDFQLYRG 297 (363)
T ss_dssp HHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHT-TSCEEEEECCCSHHHHTEEE
T ss_pred HHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHH-cCCcEEEEEecchhhhCCCC
Confidence 9999999876 999999999999888776543 33445666677777778888888886 6999999997 578999999
Q ss_pred ceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 245 GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 245 Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||.. +|++ .++|||+|||||+ +|||||||||++|||+|||||.||+ |+|||++.++|||.
T Consensus 298 GVy~~-~~~~---~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPik 362 (363)
T 3tnx_A 298 GIFVG-PCGN---KVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 362 (363)
T ss_dssp EEECC-CCCS---CCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEEC
T ss_pred CEECC-CCCC---CCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeeccc
Confidence 99986 4654 4799999999986 5999999999999999999999987 46999999999985
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=5.6e-70 Score=500.99 Aligned_cols=244 Identities=28% Similarity=0.594 Sum_probs=218.1
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC------Cc-----------------------ccc-------
Q 036910 61 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK------GL-----------------------SYR------- 104 (314)
Q Consensus 61 ~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~------~~-----------------------~y~------- 104 (314)
.|++|+.+|+|.|.+.+|+.+|+.+|++|+++|++ |.. ++ ++.
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~~g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NGGAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACS 85 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HCCCCCTTTTSCHHHHHHHHSBCHHHHHHHHHHHC-----CBCC
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-ccCCCCcccCCCHHHHHHHhcCCCCccccccCCccccccccccc
Confidence 59999999999999989999999999999999987 520 00 000
Q ss_pred --------ccc--c--cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHH
Q 036910 105 --------LGL--N--ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEY 172 (314)
Q Consensus 105 --------l~~--n--vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~ 172 (314)
++. . ||||||||.||||||||++++||+++++++|+.++||||+|+||+. ..||+||++..|++|
T Consensus 86 ~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~GC~GG~~~~a~~y 162 (312)
T 1xkg_A 86 INGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHGCHGDTIPRGIEY 162 (312)
T ss_dssp CCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHH
T ss_pred ccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCCCCCCCHHHHHHH
Confidence 000 0 8999999999999999999999999999999999999999999982 379999999999999
Q ss_pred HHHcCCcCCCCCCCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHc-cCCeEEEEEecc--cccccCCceEec
Q 036910 173 IKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL-VRPVSVAFEVVD--GFRFYKSGVYSS 249 (314)
Q Consensus 173 ~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~-~gPV~v~~~~~~--~f~~y~~Gi~~~ 249 (314)
+.+. |+++|++|||.+.++.|+ +.....+++.++..++..++++||++|++ +|||+|+|++.+ +|++|++|||..
T Consensus 163 i~~~-Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~ 240 (312)
T 1xkg_A 163 IQHN-GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQ 240 (312)
T ss_dssp HHHH-CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBC
T ss_pred HHHc-CCCccccCCccCCCCCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEEcC
Confidence 9984 999999999999999999 55555678888888887789999999999 999999999976 899999999998
Q ss_pred CCCC-CCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 250 TKCG-NTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 250 ~~~~-~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
+.|+ .. . +|||+|||||+++|++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 241 ~~c~~~~--~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 241 RDNGYQP--N-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp CCCSSCC--E-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred CCCCCCc--C-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 8886 32 5 999999999999999999999999999999999999999999999999999986
No 10
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.5e-65 Score=450.01 Aligned_cols=205 Identities=61% Similarity=1.140 Sum_probs=192.6
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+....+.||+||++..|++|+++++|+++|++|||.
T Consensus 14 vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 93 (220)
T 8pch_A 14 VSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK 93 (220)
T ss_dssp SCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHHHTCEEBTTTSCCC
T ss_pred CCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHHcCCcCcccccCcc
Confidence 89999999999999999999999999999999999999999999976668899999999999999988899999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEe
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGY 268 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGy 268 (314)
+.++.|+..+.....++.++..++..++++||++|+++|||++++++.++|+.|++|||..+.|......++|||+||||
T Consensus 94 ~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~~~~~~~~~HaV~iVGy 173 (220)
T 8pch_A 94 GQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGY 173 (220)
T ss_dssp SSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSCCCSTTTCCEEEEEEEE
T ss_pred CCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcCCCCCCcCCcEEEEEEE
Confidence 99999998777777788888888878899999999999999999999879999999999988887655568999999999
Q ss_pred eecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 269 GVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 269 g~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
|+++|++|||||||||++||++|||||+|+.|+|||+++++||+.
T Consensus 174 g~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~p 218 (220)
T 8pch_A 174 GEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIP 218 (220)
T ss_dssp EEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEE
T ss_pred EccCCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEee
Confidence 999999999999999999999999999999999999999999985
No 11
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1.5e-64 Score=443.56 Aligned_cols=201 Identities=47% Similarity=0.954 Sum_probs=188.2
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|+++++|+++|++|||.
T Consensus 13 v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 90 (215)
T 3kwz_A 13 VTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 90 (215)
T ss_dssp CCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHTCEEBTTTSCCC
T ss_pred CCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhCCccccccCCCc
Confidence 9999999999999999999999999999999999999999999986 57899999999999999988899999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++.|+........++.++..++..++++||++|+++|||+++|++. ++|++|++|||..+.|... .++|||+|||
T Consensus 91 ~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~--~~~HaV~iVG 168 (215)
T 3kwz_A 91 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVG 168 (215)
T ss_dssp SSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTT--CCCEEEEEEE
T ss_pred cCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCC--hhhCEEEEEE
Confidence 999999987776677888888888778999999999999999999996 6899999999998888542 5899999999
Q ss_pred eeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 268 yg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
||++++++|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 169 yg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 169 YGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp EEEETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred EeccCCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 99999999999999999999999999999997 89999999999985
No 12
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=2.1e-64 Score=443.53 Aligned_cols=202 Identities=45% Similarity=0.891 Sum_probs=188.0
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhh-cCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~-~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 187 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+ ....+.||+||++..|++|+.+++|+++|++|||
T Consensus 14 vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 93 (218)
T 3ovx_A 14 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPY 93 (218)
T ss_dssp CCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHHHTCEEBTTTSCC
T ss_pred CCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHHhCCcCcccccCc
Confidence 999999999999999999999999999999999999999999998 5456889999999999999987679999999999
Q ss_pred CCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 188 TGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 188 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
.+.++.|+........++.++..++..++++||++|+++|||++++++. ++|++|++|||..+.|.. .++|||+||
T Consensus 94 ~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~---~~~HaV~iV 170 (218)
T 3ovx_A 94 KAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ---NVNHGVLVV 170 (218)
T ss_dssp CSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCS---CCCEEEEEE
T ss_pred cCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCc---ccCcEEEEE
Confidence 9999999987777777888888887778999999999999999999995 589999999999888843 589999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
|||+++|++|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 171 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 171 GYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp EEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred EEeccCCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 999999999999999999999999999999998 99999999999986
No 13
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=6.6e-64 Score=440.83 Aligned_cols=202 Identities=50% Similarity=0.953 Sum_probs=185.1
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++|+.++||||+|+||+..+++.||+||++..|++|+.++.|+++|++|||.
T Consensus 13 v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~ 92 (220)
T 2xu3_A 13 VTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYE 92 (220)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHHTCEEBTTTSCCC
T ss_pred CCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHhCCcccccccCCc
Confidence 89999999999999999999999999999999999999999999875557899999999999999755699999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++.|+.......+++.++..++. ++++||++|+++|||+++|++. ++|++|++|||..+.|+. ..++|||+|||
T Consensus 93 ~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~--~~~~HaV~iVG 169 (220)
T 2xu3_A 93 ATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS--EDMDHGVLVVG 169 (220)
T ss_dssp SSCCCCCCCGGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS--SCCCEEEEEEE
T ss_pred ccCcCccCCCCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC--CCCCeEEEEEE
Confidence 9999998776555677888888875 8999999999999999999996 589999999998877864 25899999999
Q ss_pred ee----ecCCcceEEEEcCCCCCcCCCcEEEEEeCC-CccccCCceeeeee
Q 036910 268 YG----VEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 313 (314)
Q Consensus 268 yg----~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~p~~ 313 (314)
|| +++|++|||||||||++||++|||||+|+. |+|||+++++||++
T Consensus 170 ygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 170 YGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp EEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred cCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 99 677899999999999999999999999997 89999999999985
No 14
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.4e-63 Score=476.43 Aligned_cols=201 Identities=37% Similarity=0.715 Sum_probs=176.1
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCc--ccCHHHHHhhhcCCCCCCCCCCChhhH-HHHHHHcCCcCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGI--SLSEQQLVDCAQAFNNQGCNGGLPSQA-FEYIKYNGGLDTEEAY 185 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~--~lS~q~l~dc~~~~~~~gC~GG~~~~a-~~~~~~~~Gi~~e~~y 185 (314)
||||||||.||||||||++++||+++++++++.+ .||||+|+||+. .+.||+||++..| ++|++++ |+++|++|
T Consensus 222 VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~~~-Gi~tE~~y 298 (441)
T 3pdf_A 222 VSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQDF-GLVEEACF 298 (441)
T ss_dssp SCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHHHT-CBCBGGGS
T ss_pred cCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHHhc-CCCcHHHe
Confidence 8999999999999999999999999999998765 499999999985 4789999999987 8999876 99999999
Q ss_pred CCCCCCCcccCCCCCcceEeceeEEec----CCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCC---CCCC
Q 036910 186 PYTGKDGVCKFSSENVGVQVLDSVNIT----LGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGN---TPMD 258 (314)
Q Consensus 186 PY~~~~~~c~~~~~~~~~~~~~~~~~~----~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~---~~~~ 258 (314)
||.+.++.|+........++.++..+. ..++++||++|+.+|||+|+|++.++|++|++|||..+.|.. ....
T Consensus 299 PY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~~~~~~~~~~~~~~ 378 (441)
T 3pdf_A 299 PYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFEL 378 (441)
T ss_dssp CCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEECCC---CCCCCCCC
T ss_pred eecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEecCCCCcccCCCCc
Confidence 999999999986655556666766664 257899999999999999999998899999999998765532 1135
Q ss_pred CCeEEEEEEeeec--CCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeee
Q 036910 259 VNHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312 (314)
Q Consensus 259 ~~Hav~iVGyg~~--~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~ 312 (314)
++|||+|||||++ +|++|||||||||++||++|||||+||.|+|||++.+.+++
T Consensus 379 ~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~~ 434 (441)
T 3pdf_A 379 TNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAAT 434 (441)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEEE
T ss_pred CCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEee
Confidence 8999999999985 68999999999999999999999999999999999987554
No 15
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2e-63 Score=435.96 Aligned_cols=199 Identities=44% Similarity=0.881 Sum_probs=182.2
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|+++++|+++|++|||.
T Consensus 13 vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~i~~~~Gi~~e~~yPY~ 90 (214)
T 1m6d_A 13 VTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSAIKNLGGLETEDDYSYQ 90 (214)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhcCcccccCcCcC
Confidence 8999999999999999999999999999999999999999999985 36899999999999999988799999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecC--CCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSST--KCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~--~~~~~~~~~~Hav~iV 266 (314)
+.++.|+.......+++.++..++ .++++||++|+++|||+|+|++. +|++|++|||..+ .|+. ..++|||+||
T Consensus 91 ~~~~~C~~~~~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~-~f~~Y~~Giy~~~~~~c~~--~~~~HaV~iV 166 (214)
T 1m6d_A 91 GHMQSCQFSAEKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSP--WLIDHAVLLV 166 (214)
T ss_dssp SSCCCCCCCGGGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTH-HHHHCCSSEECCCGGGSCT--TCCCEEEEEE
T ss_pred CCCCcCCCCcccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEec-hhhhcCCceecCCCCcCCC--CcCCEEEEEE
Confidence 999999987665566777777776 47899999999999999999996 5999999999863 3654 2579999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
|||+++|++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 167 Gyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 167 GYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp EEEEETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred EEeecCCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 99999999999999999999999999999999999999999999986
No 16
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=9.7e-63 Score=431.86 Aligned_cols=198 Identities=39% Similarity=0.785 Sum_probs=179.1
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHc--CCcCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYN--GGLDTEEAYP 186 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~--~Gi~~e~~yP 186 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|++++ +|+++|++||
T Consensus 13 vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~~~gGi~~e~~yP 90 (215)
T 3i06_A 13 VTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQENNGAVYTEDSYP 90 (215)
T ss_dssp CCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHHHHHHSTTEEEC-CCSC
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHHHHHhccccccccCccC
Confidence 9999999999999999999999999999999999999999999985 47899999999999999985 6899999999
Q ss_pred CCCCC---CcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEE
Q 036910 187 YTGKD---GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAV 263 (314)
Q Consensus 187 Y~~~~---~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav 263 (314)
|.+.+ ..|+.......+++.++..++. ++++||++|+++|||++++++ ++|++|++|||.. |... .++|||
T Consensus 91 Y~~~~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~-~~f~~Y~~Giy~~--~~~~--~~~HaV 164 (215)
T 3i06_A 91 YASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA-SSWMTYTGGVMTS--CVSE--QLDHGV 164 (215)
T ss_dssp CCCTTSCCCCCCCSSCCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC-TTGGGCCSSEECS--CCCS--CCCEEE
T ss_pred CcCCCCCCCccccCCcccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc-hHHhcCCCCcccC--CCCC--ccCcEE
Confidence 98754 3788776666678888888864 789999999999999999999 6899999999963 5432 479999
Q ss_pred EEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeeeC
Q 036910 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 314 (314)
Q Consensus 264 ~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~~ 314 (314)
+|||||++++++|||||||||++||++|||||+||.|+|||+++++||++.
T Consensus 165 ~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~~ 215 (215)
T 3i06_A 165 LLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVVG 215 (215)
T ss_dssp EEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEEC
T ss_pred EEEEEeccCCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEecC
Confidence 999999999999999999999999999999999999999999999999974
No 17
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=4.1e-63 Score=436.31 Aligned_cols=201 Identities=37% Similarity=0.811 Sum_probs=179.9
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+++++|+++|++|||.
T Consensus 13 vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 90 (222)
T 3u8e_A 13 VTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRWVITNGGIASDANYPYT 90 (222)
T ss_dssp CCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHHHHHcCCccchhcCCCc
Confidence 99999999999999999999999999999999999999999999863 7899999999999999998899999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCC-ceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKS-GVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~-Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+..... .+++.++..++ .++++||++|. +|||+++|++. ++|++|++ |||..++|......++|||+||
T Consensus 91 ~~~~~C~~~~~~-~~~i~~~~~v~-~~~~~i~~~l~-~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~~~~HaV~iV 167 (222)
T 3u8e_A 91 GVDGTCDLNKPI-AARIDGYTNVP-NSSSALLDAVA-KQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIV 167 (222)
T ss_dssp SSCCCCCCCSCC-CBCCCEEEECC-SCHHHHHHHHH-HSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGGGCCEEEEEE
T ss_pred ccCCccccCCCC-eEEEccEEEeC-CcHHHHHHHHh-CCCEEEEEEecChhhhcEeCCceECCCcccCCCCcCCEEEEEE
Confidence 999999876655 67788888887 78999999995 69999999996 48999999 9999878876434579999999
Q ss_pred EeeecC-CcceEEEEcCCCCCcCCCcEEEEEeCCC----ccccCCceeeeeeC
Q 036910 267 GYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCASYPVVA 314 (314)
Q Consensus 267 Gyg~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~cgi~~~~~~p~~~ 314 (314)
|||+++ +++|||||||||++||++|||||+|+.| +|||+++++||++.
T Consensus 168 Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 168 GYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp EEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred EEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 999988 9999999999999999999999999987 99999999999973
No 18
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=5.6e-63 Score=434.94 Aligned_cols=200 Identities=46% Similarity=0.898 Sum_probs=182.4
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+...++.||+||++..|++|+++++|+++|++|||.
T Consensus 13 vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 92 (220)
T 3p5u_A 13 VVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINNGGINTEANYPYT 92 (220)
T ss_dssp SCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccccc
Confidence 89999999999999999999999999999999999999999999975558899999999999999988899999999999
Q ss_pred CCCCcccCCCCC-cceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~~~-~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+..... ..+++.++..++..++++|+++| .+|||++++++. ++|++|++|||.. +|.. ..+|||+||
T Consensus 93 ~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~-~~~~---~~~HaV~iV 167 (220)
T 3p5u_A 93 AEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTG-PCGT---AVDHAVTIV 167 (220)
T ss_dssp SSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECC-CCCC---SCCEEEEEE
T ss_pred cCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccCceECC-CCCC---ccceEEEEE
Confidence 999999864332 24677788888777899999999 589999999995 6899999999976 6764 379999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCC---ccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN---MCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---~cgi~~~~~~p~~ 313 (314)
|||+++|++|||||||||++||++|||||+|+.| +|||++.++||++
T Consensus 168 Gyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 168 GYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp EEEEETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred EEecCCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 9999999999999999999999999999999987 9999999999986
No 19
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.2e-62 Score=439.15 Aligned_cols=201 Identities=41% Similarity=0.846 Sum_probs=184.7
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|+.+++|+++|++|||.
T Consensus 14 vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~ 91 (246)
T 2b1m_A 14 ITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVKHGGIASEADYPYK 91 (246)
T ss_dssp CCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHHTTCBCBTTTSCCC
T ss_pred CCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHhCCcCcccccccc
Confidence 9999999999999999999999999999999999999999999985 47899999999999999988799999999999
Q ss_pred CCCCcccCCCCCcceEecee---EEecCCCHHHHHHHHHc---cCCeEEEEEecccccccCCceEecCCCCCCCCCCCeE
Q 036910 189 GKDGVCKFSSENVGVQVLDS---VNITLGAEDELQHAVGL---VRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHA 262 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~---~~~~~~~~~~ik~~l~~---~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Ha 262 (314)
+.++.|+.......+++.++ ..++..++++||++|++ +|||+++|++ ++|++|++|||..+.|+... .++||
T Consensus 92 ~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~-~~f~~Y~~Giy~~~~c~~~~-~~~Ha 169 (246)
T 2b1m_A 92 ARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA-KDFHFYSGGIYDGGNCSSPY-GINHF 169 (246)
T ss_dssp SSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC-TTGGGCCSSEECCTTCCSSC-CCCEE
T ss_pred CCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc-chhhcccceeecCCCCCCCC-cCceE
Confidence 99999987655556677777 67776789999999998 5999999999 89999999999887787531 37999
Q ss_pred EEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 263 VVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 263 v~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 170 V~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 170 VLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp EEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred EEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 9999999999999999999999999999999999997 89999999999986
No 20
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-62 Score=432.29 Aligned_cols=198 Identities=46% Similarity=0.921 Sum_probs=182.8
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+++++|+++|++|||.
T Consensus 15 v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~ 92 (221)
T 1cqd_A 15 VVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVNNGGINSEETYPYR 92 (221)
T ss_dssp CCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHHTSBCBTTTSCCC
T ss_pred cCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHHHHHHhCCccccccCCcc
Confidence 99999999999999999999999999999999999999999999853 7899999999999999988899999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++.|+.......+++.++..++..++++||++|++ |||+|+|++. ++|++|++|||.. +|.. .++|||+|||
T Consensus 93 ~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~~~~---~~~HaV~iVG 167 (221)
T 1cqd_A 93 GQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTG-SCNI---SANHALTVVG 167 (221)
T ss_dssp SSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC-CCCC---CCCEEEEEEE
T ss_pred CCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccccC-CCCC---cCCeEEEEEE
Confidence 9999998766656678888888887789999999975 9999999996 6899999999986 5764 4899999999
Q ss_pred eeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 268 yg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
||+++|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 168 yg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 168 YGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999999999999999999999999999983 89999999999986
No 21
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=7e-63 Score=434.95 Aligned_cols=198 Identities=30% Similarity=0.623 Sum_probs=182.9
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++.+++++.++||||+|+||+. +.||+||++..|++|++++ |+++|++|||.
T Consensus 22 vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~~-Gi~~e~~yPY~ 97 (222)
T 3f5v_A 22 VTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQHN-GVVQESYYRYV 97 (222)
T ss_dssp SCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHHHH-CEEBGGGSCCC
T ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHHHHc-CCCchhhCCCc
Confidence 9999999999999999999999999999999999999999999986 7899999999999999987 99999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHc-cCCeEEEEEe--cccccccCCceEecCCCCCCCCCCCeEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL-VRPVSVAFEV--VDGFRFYKSGVYSSTKCGNTPMDVNHAVVA 265 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~-~gPV~v~~~~--~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~i 265 (314)
+..+.|+ ......+++.++..++..++++||++|++ +|||+|++++ .++|++|++|++....|.. ..++|||+|
T Consensus 98 ~~~~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~~~--~~~~HaV~i 174 (222)
T 3f5v_A 98 AREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGY--QPNYHAVNI 174 (222)
T ss_dssp SSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSS--SCEEEEEEE
T ss_pred ccCCCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCCCC--CccCcEEEE
Confidence 9999998 55566678888888877889999999998 8999999999 4689999999887655543 358999999
Q ss_pred EEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 266 VGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 266 VGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
||||+++|++|||||||||++||++|||||+|+.|.|||+++++||++
T Consensus 175 VGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 175 VGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp EEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred EEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 999999999999999999999999999999999999999999999985
No 22
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.2e-62 Score=429.46 Aligned_cols=198 Identities=45% Similarity=0.884 Sum_probs=181.5
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+++++|+++|++|||.
T Consensus 13 v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 90 (215)
T 1iwd_A 13 VNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITNGGIDTQQNYPYS 90 (215)
T ss_dssp SCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC--CCCCCCCCHHHHHHHHHHhCCcccccccCcc
Confidence 99999999999999999999999999999999999999999999852 7899999999999999988799999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecc-cccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++.|+.... ..+++.++..++..++++||++|.+ |||+++|++.+ +|+.|++|||.. +|.. .++|||+|||
T Consensus 91 ~~~~~C~~~~~-~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~~---~~~HaV~iVG 164 (215)
T 1iwd_A 91 AVQGSCKPYRL-RVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTG-PCGT---AQNHGVVIVG 164 (215)
T ss_dssp SSCCCCCTTCC-CCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCC---CCCEEEEEEE
T ss_pred CCCCCCCCCCC-ceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECC-CCCC---cCCEEEEEEE
Confidence 99999987653 4567778888877789999999985 99999999975 799999999986 5764 4799999999
Q ss_pred eeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeeeC
Q 036910 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA 314 (314)
Q Consensus 268 yg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~~ 314 (314)
||+++|++|||||||||++||++|||||+|+. |.|||+++++||+++
T Consensus 165 yg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 215 (215)
T 1iwd_A 165 YGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215 (215)
T ss_dssp EEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred EeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeeeC
Confidence 99999999999999999999999999999997 899999999999974
No 23
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.7e-62 Score=433.08 Aligned_cols=200 Identities=45% Similarity=0.884 Sum_probs=185.1
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+...++.||+||++..|++|+.+++|+++|++|||.
T Consensus 19 v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 98 (224)
T 3f75_A 19 VTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYL 98 (224)
T ss_dssp CCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHHhCCccccccCCCc
Confidence 99999999999999999999999999999999999999999999875558899999999999999986699999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecc-cccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++.|+........++.++..++..++++||++|. +|||+++|++.. +|++|++|||. +.|.. .++|||+|||
T Consensus 99 ~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~-~~~~~---~~~Hav~iVG 173 (224)
T 3f75_A 99 ARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFD-ASCGT---DLDHGVLLVG 173 (224)
T ss_dssp SSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEEC-CCCCC---CCCEEEEEEE
T ss_pred CCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccceEC-CCCCC---ccCeEEEEEE
Confidence 999999877666667788888888778999999999 899999999964 89999999998 56753 5899999999
Q ss_pred eeec--CCcceEEEEcCCCCCcCCCcEEEEEeCC---CccccCCceeeeee
Q 036910 268 YGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGK---NMCGIATCASYPVV 313 (314)
Q Consensus 268 yg~~--~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~~cgi~~~~~~p~~ 313 (314)
||++ ++++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 174 yg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 174 YGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp EEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred EecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 9998 8899999999999999999999999998 99999999999985
No 24
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=3.2e-62 Score=428.75 Aligned_cols=197 Identities=40% Similarity=0.837 Sum_probs=180.6
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|++++ |+++|++|||.
T Consensus 13 v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~ 89 (216)
T 1ppo_A 13 VTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYK 89 (216)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH-CBCBTTTSCCC
T ss_pred CCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHh-CcCccccCCcc
Confidence 8999999999999999999999999999999999999999999985 47899999999999999988 79999999999
Q ss_pred CCCCcccCCCC-CcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~~-~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+.... ...+++.++..++..++++||++|++ |||+++|++. ++|++|++|||.. +|++ ..+|||+||
T Consensus 90 ~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~-~~~~---~~~HaV~iV 164 (216)
T 1ppo_A 90 AKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEG-PCGT---KVDHAVTAV 164 (216)
T ss_dssp SSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECC-SCCS---CCCEEEEEE
T ss_pred CCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECC-CCCC---CCCEEEEEE
Confidence 99999987543 34567788888877789999999986 9999999995 7899999999976 5764 369999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||+++|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 165 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 165 GYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 999999999999999999999999999999985 89999999999986
No 25
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=8.2e-62 Score=426.76 Aligned_cols=197 Identities=39% Similarity=0.829 Sum_probs=180.3
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|++++ |+++|++|||.
T Consensus 13 v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~-Gi~~e~~yPY~ 89 (218)
T 1yal_A 13 VTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQ 89 (218)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH-CBCBTTTSCCC
T ss_pred CCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHc-CCCcccccccc
Confidence 8999999999999999999999999999999999999999999983 47899999999999999988 79999999999
Q ss_pred CCCCcccCCCC-CcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~~-~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+.... ...+++.++..++..++++||++|++ |||+++|++. ++|++|++|||.. +|++ .++|||+||
T Consensus 90 ~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~~~~---~~~HaV~iV 164 (218)
T 1yal_A 90 AKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDG-PCGT---KLDHAVTAV 164 (218)
T ss_dssp SSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC-SCCS---CCCEEEEEE
T ss_pred CCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECC-CCCC---CCCEEEEEE
Confidence 99999987543 34567888888877789999999985 9999999995 7899999999976 5764 379999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 165 Gyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 165 GYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp EEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred EeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 999999999999999999999999999999985 89999999999986
No 26
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=6.7e-62 Score=449.94 Aligned_cols=197 Identities=32% Similarity=0.633 Sum_probs=169.7
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCC-CcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK-GISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 187 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~-~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 187 (314)
||||||||.||||||||++++||+++++++++ .++||||+|+||+.. .+.||+||++..|++|++++ |+++|++|||
T Consensus 88 vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~-~~~GC~GG~~~~A~~yi~~~-Gi~~e~~yPY 165 (325)
T 3hhi_A 88 IPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSD-CGDGCNGGDPDRAWAYFSST-GLVSDYCQPY 165 (325)
T ss_dssp TTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG-GBCTTBCBCHHHHHHHHHHT-CBCBTTTSCC
T ss_pred cccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-CCCcccccCC
Confidence 99999999999999999999999999999997 899999999999863 46899999999999999988 9999999999
Q ss_pred C-CC----------CCcccCC-------------CC---CcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEeccccc
Q 036910 188 T-GK----------DGVCKFS-------------SE---NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFR 240 (314)
Q Consensus 188 ~-~~----------~~~c~~~-------------~~---~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~ 240 (314)
. +. .+.|... .. .....+..+. + .++++||++|+.+|||+|+|++.++|+
T Consensus 166 ~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i~~~~~f~ 242 (325)
T 3hhi_A 166 PFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAFDVYEDFI 242 (325)
T ss_dssp SSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEEEEEHHHH
T ss_pred ccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEEEeccccc
Confidence 8 32 2567610 00 0112233333 4 689999999999999999999988999
Q ss_pred ccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 241 FYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 241 ~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
+|++|||..+.+ . ..++|||+|||||+++|++|||||||||++||++|||||+||.|+|||++.+.+++.
T Consensus 243 ~Y~~GVy~~~~~-~--~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~p 312 (325)
T 3hhi_A 243 AYNSGVYHHVSG-Q--YLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIP 312 (325)
T ss_dssp TCCSSEECCCSC-C--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEEE
T ss_pred cccCceecCCCC-C--CCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEeec
Confidence 999999976433 2 246999999999999999999999999999999999999999999999999988763
No 27
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=2.3e-61 Score=420.90 Aligned_cols=193 Identities=42% Similarity=0.865 Sum_probs=176.7
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|+.+++|+++|++|||.
T Consensus 13 vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~ 90 (208)
T 1o0e_A 13 VTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINNGGIDTQANYPYK 90 (208)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHhCCcCcccccCcc
Confidence 9999999999999999999999999999999999999999999985 47899999999999999988799999999999
Q ss_pred CCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecc-cccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++.|+. ....+++.++..++..++++||++|++ |||+++|++.. +|++|++|||.. +|+. .++|||+|||
T Consensus 91 ~~~~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~~---~~~HaV~iVG 163 (208)
T 1o0e_A 91 AVQGPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSG-PCGT---KLNHGVTIVG 163 (208)
T ss_dssp SSCCCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCS---CCCEEEEEEE
T ss_pred CCCCcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECC-CCCC---cCCEEEEEEE
Confidence 99999986 334567778888877789999999985 99999999964 899999999976 5764 4799999999
Q ss_pred eeecCCcceEEEEcCCCCCcCCCcEEEEEeCC--CccccCCceeeeeeC
Q 036910 268 YGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK--NMCGIATCASYPVVA 314 (314)
Q Consensus 268 yg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~--~~cgi~~~~~~p~~~ 314 (314)
||+ +|||||||||++||++|||||+|+. |.|||+++++||+++
T Consensus 164 yg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~~ 208 (208)
T 1o0e_A 164 YQA----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTKA 208 (208)
T ss_dssp ECS----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEECC
T ss_pred eCC----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeecC
Confidence 998 8999999999999999999999997 899999999999975
No 28
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=2.8e-61 Score=429.48 Aligned_cols=196 Identities=39% Similarity=0.811 Sum_probs=181.1
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+.+++|+++|++|||.
T Consensus 30 vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~--~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~ 107 (241)
T 2oul_A 30 VTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK--NYGCNGGLINNAFEDMIELGGICPDGDYPYV 107 (241)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT--SCTTBCBCHHHHHHHHHHTTSBCBTTSSCCC
T ss_pred CCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC--CCCCCCCCHHHHHHHHHHhCCcCccccCCCc
Confidence 99999999999999999999999999999999999999999999853 7899999999999999986799999999999
Q ss_pred CCCCc-ccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~-c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++. |+.......+++.++..++..++++||++| |||+++|++.++|+.|++|||.. .|+. .++|||+|||
T Consensus 108 ~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~-~c~~---~~~HaV~iVG 180 (241)
T 2oul_A 108 SDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEGIFDG-ECGD---QLNHAVMLVG 180 (241)
T ss_dssp TTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBCHHHHTCCSSBCCS-CBCS---SCCEEEEEEE
T ss_pred CCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecCcchhhcCCcEEcC-cCCC---CCCEEEEEEE
Confidence 98888 998766667788888888877899999999 99999999988899999999987 6764 2799999999
Q ss_pred eeecC----------CcceEEEEcCCCCCcCCCcEEEEEeCCCc----cccCCceeeeee
Q 036910 268 YGVED----------GVPYWLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPVV 313 (314)
Q Consensus 268 yg~~~----------g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----cgi~~~~~~p~~ 313 (314)
||+++ |++|||||||||++||++|||||+|+.|. |||++.++||++
T Consensus 181 yg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 181 FGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp EEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred eccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 99875 78999999999999999999999999876 999999999986
No 29
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.8e-61 Score=431.14 Aligned_cols=196 Identities=40% Similarity=0.783 Sum_probs=180.8
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+.+++|+++|++|||.
T Consensus 32 vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~--~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~ 109 (243)
T 3bwk_A 32 VTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK--NNGCYGGYITNAFDDMIDLGGLCSQDDYPYV 109 (243)
T ss_dssp CCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT--SCGGGCCCHHHHHHHHHHTTSBCBTTTSCCC
T ss_pred CCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHHHhCCcccccccCCc
Confidence 99999999999999999999999999999999999999999999853 7899999999999999986799999999999
Q ss_pred CCCCc-ccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEE
Q 036910 189 GKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVG 267 (314)
Q Consensus 189 ~~~~~-c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVG 267 (314)
+.++. |+.......+++.++..++..++++||++| |||+++|++.++|+.|++|||.. .|+.. ++|||+|||
T Consensus 110 ~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~-~c~~~---~~HaV~iVG 182 (243)
T 3bwk_A 110 SNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL---GPISISIAASDDFAFYRGGFYDG-ECGAA---PNHAVILVG 182 (243)
T ss_dssp TTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCCHHHHTCCSSSCCC-CCCSS---CCEEEEEEE
T ss_pred CCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecChhHHhcCCceecC-CCCCc---CCeEEEEEE
Confidence 98888 987665566788888888877899999999 99999999988899999999987 78642 799999999
Q ss_pred eeecC----------CcceEEEEcCCCCCcCCCcEEEEEeCCCc----cccCCceeeeee
Q 036910 268 YGVED----------GVPYWLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPVV 313 (314)
Q Consensus 268 yg~~~----------g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----cgi~~~~~~p~~ 313 (314)
||+++ |++|||||||||++||++|||||+|+.|. |||++.++||++
T Consensus 183 yg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 183 YGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp EEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred ecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 99875 78999999999999999999999999876 999999999986
No 30
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=5.4e-61 Score=419.81 Aligned_cols=193 Identities=38% Similarity=0.804 Sum_probs=176.9
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|++++ |+++|++|||.
T Consensus 13 v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~ 89 (212)
T 2cio_A 13 VTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQY-GIHYRNTYPYE 89 (212)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCC
T ss_pred CCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHh-CcCcccccCCc
Confidence 9999999999999999999999999999999999999999999985 47899999999999999987 79999999999
Q ss_pred CCCCcccCCC-CCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecc-cccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSS-ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~-~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+... ....+++.++..++..+++.||++|.+ |||+++|++.. +|++|++|||.. +|++ .++|||+||
T Consensus 90 ~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~~~~---~~~HaV~iV 164 (212)
T 2cio_A 90 GVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVG-PCGN---KVDHAVAAV 164 (212)
T ss_dssp SSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCS---CCCEEEEEE
T ss_pred CCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecC-CCCC---CCCEEEEEE
Confidence 9999998765 345677888888877789999999985 99999999964 899999999986 5764 479999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||+ +|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 165 Gyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 165 GYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 9998 8999999999999999999999996 89999999999986
No 31
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=3.7e-61 Score=425.51 Aligned_cols=199 Identities=48% Similarity=0.925 Sum_probs=180.3
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. .+.||+||++..|++|+.+++|+++|++|||.
T Consensus 14 vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~ 92 (229)
T 1s4v_A 14 VTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQRGGITTEANYPYE 92 (229)
T ss_dssp CCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCTTBCBCHHHHHHHHHHHTCBCBTTTSCCC
T ss_pred CCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC-CCCCCCCCCHHHHHHHHHHhCCccccccCCcc
Confidence 99999999999999999999999999999999999999999999853 47899999999999999988899999999999
Q ss_pred CCCCcccCCC-CCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEe-cccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSS-ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~-~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~-~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+... ....+++.++..++..+++.||++|.+ |||+++|++ .++|++|++|||.. +|+. .++|||+||
T Consensus 93 ~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~c~~---~~~HaV~iV 167 (229)
T 1s4v_A 93 AYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG-SCGT---ELDHGVAIV 167 (229)
T ss_dssp SSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCC---CCCEEEEEE
T ss_pred CCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECC-CCCC---CCCeEEEEE
Confidence 9999998642 234567778888877789999999985 999999999 67899999999976 5764 369999999
Q ss_pred EeeecC-CcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 267 GYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||+++ |++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 168 Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 168 GYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp EEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 999987 999999999999999999999999985 89999999999986
No 32
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2.7e-61 Score=433.28 Aligned_cols=199 Identities=49% Similarity=0.950 Sum_probs=180.6
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+.. .+.||+||++..|++|+++++|+++|++|||.
T Consensus 16 vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~ 94 (262)
T 2fo5_A 16 VTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYR 94 (262)
T ss_dssp CCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHHHTTCEEBTTTSCCC
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHHHcCCcCchhcCCCc
Confidence 99999999999999999999999999999999999999999999853 47899999999999999988899999999999
Q ss_pred CCCCcccCCC---CCc-ceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEE
Q 036910 189 GKDGVCKFSS---ENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAV 263 (314)
Q Consensus 189 ~~~~~c~~~~---~~~-~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav 263 (314)
+.++.|+... ... .+++.++..++..+++.||++|++ |||+++|++. ++|++|++|||.. +|++ ..+|||
T Consensus 95 ~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~-~c~~---~~~HaV 169 (262)
T 2fo5_A 95 AARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGV 169 (262)
T ss_dssp SSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCCC---CCCEEE
T ss_pred CccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCCceECC-CCCC---cCCEEE
Confidence 9999998653 334 567788888877789999999986 9999999996 6899999999976 6764 369999
Q ss_pred EEEEeeec-CCcceEEEEcCCCCCcCCCcEEEEEeCCC----ccccCCceeeeee
Q 036910 264 VAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCASYPVV 313 (314)
Q Consensus 264 ~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~cgi~~~~~~p~~ 313 (314)
+|||||++ +|++|||||||||++||++|||||+|+.| .|||++.++||++
T Consensus 170 ~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 170 AVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp EEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred EEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 99999998 58999999999999999999999999864 5999999999986
No 33
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=9.3e-61 Score=418.82 Aligned_cols=193 Identities=41% Similarity=0.863 Sum_probs=177.5
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|++++ |+++|++|||.
T Consensus 13 vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~-Gi~~e~~yPY~ 89 (214)
T 2bdz_A 13 VTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDN-GVHTEREYPYE 89 (214)
T ss_dssp CCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH-CEEBTTTSCCC
T ss_pred CCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh-CCCccccCCCC
Confidence 8999999999999999999999999999999999999999999985 47899999999999999998 99999999999
Q ss_pred CCCCcccCCCC-CcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~~-~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+.++.|+.... ...+++.++..++..++++||++|++ |||+++|++. ++|++|++|||.. +|.. .++|||+||
T Consensus 90 ~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~-~~~~---~~~HaV~iV 164 (214)
T 2bdz_A 90 KKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEG-PCGT---NTDHAVTAV 164 (214)
T ss_dssp SSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-SCCS---CCCEEEEEE
T ss_pred CCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecC-CCCC---CCCeEEEEE
Confidence 99999987654 34577888888877789999999986 9999999997 6899999999986 5764 479999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||+ +|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 165 Gyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 165 GYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred EcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 9998 8999999999999999999999986 89999999999986
No 34
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-60 Score=418.26 Aligned_cols=193 Identities=37% Similarity=0.835 Sum_probs=174.8
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 188 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 188 (314)
||||||||.||||||||++++||+++++++++.++||||+|+||+. .+.||+||++..|++|++++ |+++|++|||.
T Consensus 13 vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~-Gi~~e~~yPY~ 89 (213)
T 3ioq_A 13 VTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQYVANS-GIHLRQYYPYE 89 (213)
T ss_dssp CCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH-CEEBGGGSCCC
T ss_pred CCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHc-CCCchhccCcC
Confidence 9999999999999999999999999999999999999999999986 47899999999999999998 99999999999
Q ss_pred CCCCcccCCC-CCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEEEEE
Q 036910 189 GKDGVCKFSS-ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAV 266 (314)
Q Consensus 189 ~~~~~c~~~~-~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iV 266 (314)
+..+.|+... ....+++.++..++..+++.+++++. +|||++++++. ++|+.|++|||.. +|.. .++|||+||
T Consensus 90 ~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~-~GPV~v~i~~~~~~f~~y~~Giy~~-~~~~---~~~HaV~iV 164 (213)
T 3ioq_A 90 GVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIA-IQPVSIVVEAKGRAFQNYRGGIFAG-PCGT---SIDHAVAAV 164 (213)
T ss_dssp SSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHT-TSCEEEEECCCSHHHHTCCSSEECC-SCCS---CCCEEEEEE
T ss_pred CCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHH-hCCEEEEEEechhhhhhccCCeEcC-CCCC---ccCceEEEE
Confidence 9999998643 34567788888887666767777665 69999999997 7999999999987 5643 479999999
Q ss_pred EeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC----CccccCCceeeeee
Q 036910 267 GYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~cgi~~~~~~p~~ 313 (314)
|||+ +|||||||||++||++|||||+||. |+|||++.++||++
T Consensus 165 Gyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 165 GYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred ecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 9986 8999999999999999999999997 89999999999986
No 35
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=2.6e-60 Score=438.41 Aligned_cols=199 Identities=34% Similarity=0.728 Sum_probs=168.1
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCC--CcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCC-
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK--GISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY- 185 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~--~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y- 185 (314)
||||||||.||||||||++++||++++++++. .+.||||+|+||+....+.||+||++..|++|++++ |+++|.+|
T Consensus 80 vtpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~ 158 (317)
T 3pbh_A 80 IKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYE 158 (317)
T ss_dssp GTCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTT
T ss_pred cCCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhcc
Confidence 99999999999999999999999999999874 899999999999863357899999999999999988 99999888
Q ss_pred ------CCCC---------CCCcccCC---------CCC-cc-------eEeceeEEecCCCHHHHHHHHHccCCeEEEE
Q 036910 186 ------PYTG---------KDGVCKFS---------SEN-VG-------VQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233 (314)
Q Consensus 186 ------PY~~---------~~~~c~~~---------~~~-~~-------~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~ 233 (314)
||.. ..+.|... ... .. ......+.++ .++++||++|+.+|||+|+|
T Consensus 159 ~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i 237 (317)
T 3pbh_A 159 SHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAF 237 (317)
T ss_dssp CCCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEE
T ss_pred CCCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEE
Confidence 9984 34556421 000 00 0111223443 57999999999999999999
Q ss_pred EecccccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeee
Q 036910 234 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312 (314)
Q Consensus 234 ~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~ 312 (314)
++.++|++|++|||..+ |.. ..++|||+|||||+++|++|||||||||++||++|||||+||.|+|||++.+..++
T Consensus 238 ~~~~~f~~Y~~GVy~~~-~~~--~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 238 SVYSDFLLYKSGVYQHV-TGE--MMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 313 (317)
T ss_dssp EEEGGGGGEEEEEECCC-SCC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECC
T ss_pred EecccccCCCCcEEccC-CCC--CCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeee
Confidence 99889999999999874 433 24699999999999999999999999999999999999999999999999987654
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1e-58 Score=418.72 Aligned_cols=200 Identities=33% Similarity=0.698 Sum_probs=168.9
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcC--CCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCC-----
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG--KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDT----- 181 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g--~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~----- 181 (314)
||||||||.||||||||++++||++++++++ ..+.||||+|+||+..+.+.||+||++..|++|++++ |+++
T Consensus 23 vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a~~y~~~~-Gi~~~~~Y~ 101 (266)
T 3cbj_A 23 IKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYE 101 (266)
T ss_dssp GGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHHHHHHHHT-CBCBCCSTT
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHHHHHHHHh-CcCcCcccc
Confidence 8999999999999999999999999999875 4799999999999863346899999999999999986 8999
Q ss_pred --CCCCCCC---------CCCCcccCC---------CCC--------cceEeceeEEecCCCHHHHHHHHHccCCeEEEE
Q 036910 182 --EEAYPYT---------GKDGVCKFS---------SEN--------VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAF 233 (314)
Q Consensus 182 --e~~yPY~---------~~~~~c~~~---------~~~--------~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~ 233 (314)
|++|||. +..+.|... ... ........+.++ .++++||++|+++|||+|+|
T Consensus 102 ~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~~~~i~~~i~~~GPV~v~i 180 (266)
T 3cbj_A 102 SHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAF 180 (266)
T ss_dssp CCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECC-SCHHHHHHHHHHHCCEEEEE
T ss_pred ccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeC-CCHHHHHHHHHhcCCEEEEE
Confidence 9999998 345566421 100 001112334454 57999999999999999999
Q ss_pred EecccccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 234 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 234 ~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
++.++|+.|++|||..+ |.. ..++|||+|||||+++|++|||||||||++||++|||||+|+.|.|||++.+.+|+.
T Consensus 181 ~~~~~f~~Y~~Gvy~~~-~~~--~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgI~~~~~~~~p 257 (266)
T 3cbj_A 181 SVYSDFLLYKSGVYQHV-TGE--MMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 257 (266)
T ss_dssp EEEGGGGGCCSSEECCC-SSC--EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECCB
T ss_pred EeccchhhcCCeEEecC-CCC--ccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEEcCCCcccccCceEEEEe
Confidence 99889999999999864 433 246999999999999999999999999999999999999999999999999988764
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=6.7e-58 Score=410.87 Aligned_cols=198 Identities=32% Similarity=0.678 Sum_probs=166.4
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcC--CCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCCC-
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFG--KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAY- 185 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g--~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y- 185 (314)
||||||||.||||||||++++||++++++++ +.++||||+|+||+.. .+.||+||++..|++|++++ |+++|++|
T Consensus 19 vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~~-Gi~~e~~y~ 96 (254)
T 3qsd_A 19 IATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES-CGLGCEGGILGPAWDYWVKE-GIVTGSSKE 96 (254)
T ss_dssp GGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT-SBCTTBCBCHHHHHHHHHHT-CBCBCCCTT
T ss_pred cCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC-CCCCCCCCCHHHHHHHHHHc-CCCcccccc
Confidence 9999999999999999999999999999976 6899999999999863 46899999999999999987 99999888
Q ss_pred ------CCC---------CCCCcccCCC----------CCc-c-------eEeceeEEecCCCHHHHHHHHHccCCeEEE
Q 036910 186 ------PYT---------GKDGVCKFSS----------ENV-G-------VQVLDSVNITLGAEDELQHAVGLVRPVSVA 232 (314)
Q Consensus 186 ------PY~---------~~~~~c~~~~----------~~~-~-------~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~ 232 (314)
||. +..+.|.... ... . ......+.++ .++++||++|+++|||+++
T Consensus 97 ~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~gPv~~~ 175 (254)
T 3qsd_A 97 NHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDEKAIQKEIMKYGPVEAG 175 (254)
T ss_dssp TCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCHHHHHHHHHHHCCEEEE
T ss_pred cCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcHHHHHHHHHHcCCEEEE
Confidence 996 4445554211 000 0 0011123333 4799999999999999999
Q ss_pred EEecccccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeee
Q 036910 233 FEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 312 (314)
Q Consensus 233 ~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~ 312 (314)
|++.++|++|++|||..+.+. ..++|||+|||||++++++|||||||||++||++|||||+||.|+|||++.+...+
T Consensus 176 ~~~~~~f~~y~~Gi~~~~~~~---~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~rg~n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 176 FTVYEDFLNYKSGIYKHITGE---TLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVTAGR 252 (254)
T ss_dssp EEEEGGGGGCCSSEECCCSSC---EEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSSEEEEE
T ss_pred EEeccccccccCCeeccCCCC---CCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEEcCCCeecCCCceEeec
Confidence 999889999999999875432 24699999999999999999999999999999999999999999999999987654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.3e-57 Score=413.37 Aligned_cols=196 Identities=24% Similarity=0.548 Sum_probs=172.4
Q ss_pred cCccccCC---CCchhHHHhhHHHHHHHHHHHcC-C--CcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCC
Q 036910 109 ISPVKDQG---HCGSCWTFSTTGSLEAAYHQAFG-K--GISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTE 182 (314)
Q Consensus 109 vtpVkdQg---~cGsCwAfa~~~~lE~~~~~~~g-~--~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e 182 (314)
|||||||| .||||||||++++||++++++++ + .++||||+|+||+. +.||+||++..|++|+.++ |+++|
T Consensus 51 vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~GG~~~~a~~yi~~~-Gi~~e 126 (277)
T 1deu_A 51 ASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEGGNDLSVWDYAHQH-GIPDE 126 (277)
T ss_dssp CCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBEECHHHHHHHHHHT-CBCBG
T ss_pred CCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCCCCHHHHHHHHHHc-CCCcC
Confidence 89999999 99999999999999999999875 3 47999999999985 3799999999999999886 89999
Q ss_pred CCCCCCCCCCcccC-CC--------------CCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceE
Q 036910 183 EAYPYTGKDGVCKF-SS--------------ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVY 247 (314)
Q Consensus 183 ~~yPY~~~~~~c~~-~~--------------~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~ 247 (314)
++|||.+.++.|+. .. ....+++.++..++ ++++||++|+.+|||+++|++.++|+.|++|||
T Consensus 127 ~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GIy 204 (277)
T 1deu_A 127 TCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPISCGIMATERLANYTGGIY 204 (277)
T ss_dssp GGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEEEEECCCHHHHTCCSSEE
T ss_pred ccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEEEEEecccccccCcCcEE
Confidence 99999998888873 11 11234555566554 588999999999999999999889999999999
Q ss_pred ecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCCC--------ccccCCceeeeee
Q 036910 248 SSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN--------MCGIATCASYPVV 313 (314)
Q Consensus 248 ~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~--------~cgi~~~~~~p~~ 313 (314)
..+.|.. .++|||+|||||+++|++|||||||||++||++|||||+|+.| .|||++.+.|++.
T Consensus 205 ~~~~~~~---~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgIe~~~~~~~p 275 (277)
T 1deu_A 205 AEYQDTT---YINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDP 275 (277)
T ss_dssp CBCCSCC---CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTTTSCEEEEEE
T ss_pred CCCCCCC---cCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccceeccccEeecc
Confidence 8765432 5899999999999999999999999999999999999999998 9999999999874
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=6.2e-56 Score=400.64 Aligned_cols=201 Identities=26% Similarity=0.470 Sum_probs=161.6
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcCCCCCCCCCCChhhH-HHHHHHcCCcCCCCCCCC
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQA-FEYIKYNGGLDTEEAYPY 187 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a-~~~~~~~~Gi~~e~~yPY 187 (314)
+|||||||.||||||||++++||+++++++++++.||||+|+||+...++.||+||.+..+ +.|+.++||+++|++|||
T Consensus 22 it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~~~Ggi~~e~~yPY 101 (265)
T 2wbf_X 22 NLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIEDYGFLPAESNYPY 101 (265)
T ss_dssp GSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHHHHCCCCBTTTSCC
T ss_pred CCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHHHcCCCCCccccCC
Confidence 6699999999999999999999999999999999999999999987556889999975555 577777866999999999
Q ss_pred CCC--CCcccCCCC-----------------CcceEeceeEEecCC----C----HHHHHHHHHccCCeEEEEEeccccc
Q 036910 188 TGK--DGVCKFSSE-----------------NVGVQVLDSVNITLG----A----EDELQHAVGLVRPVSVAFEVVDGFR 240 (314)
Q Consensus 188 ~~~--~~~c~~~~~-----------------~~~~~~~~~~~~~~~----~----~~~ik~~l~~~gPV~v~~~~~~~f~ 240 (314)
.+. .+.|+.... ...+++.++..++.. + +++||++|+++|||+++|++. +|+
T Consensus 102 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~GPV~v~i~~~-~f~ 180 (265)
T 2wbf_X 102 NYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKGSVIAYIKAE-NVM 180 (265)
T ss_dssp CGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHSCEEEEECGG-GGC
T ss_pred cCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcCCEEEEEEcc-ccc
Confidence 863 577875432 122355566655532 3 378999999999999999985 577
Q ss_pred ccC-CceEecCCCCCCCCCCCeEEEEEEeeec---CC--cceEEEEcCCCCCcCCCcEEEEEe-CCCccccCCceeeee
Q 036910 241 FYK-SGVYSSTKCGNTPMDVNHAVVAVGYGVE---DG--VPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYPV 312 (314)
Q Consensus 241 ~y~-~Gi~~~~~~~~~~~~~~Hav~iVGyg~~---~g--~~ywivkNSWG~~WG~~Gy~~i~~-~~~~cgi~~~~~~p~ 312 (314)
.|+ +|++....|+. ..++|||+|||||++ +| ++|||||||||++|||+|||||+| +.|.|||++.+++++
T Consensus 181 ~y~~~g~~~~~~c~~--~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~Cgi~~~~~~~~ 257 (265)
T 2wbf_X 181 GYEFSGKKVKNLCGD--DTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTHCHFNFIHSVVI 257 (265)
T ss_dssp SGGGGSSSEECCCCC--SCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTTCSSCSCCEEEE
T ss_pred ccccCCcEEcCCCCC--CcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCccCcceeEEEEe
Confidence 775 55544446764 258999999999984 66 689999999999999999999996 678999777655443
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=1.1e-49 Score=364.07 Aligned_cols=190 Identities=21% Similarity=0.322 Sum_probs=157.4
Q ss_pred ccccccccCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHH--hhhcC-CC-CCCCCCCChhhHHHHHHHcC
Q 036910 102 SYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLV--DCAQA-FN-NQGCNGGLPSQAFEYIKYNG 177 (314)
Q Consensus 102 ~y~l~~nvtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~--dc~~~-~~-~~gC~GG~~~~a~~~~~~~~ 177 (314)
++.++... ||||||.||||||||++++||+++. ++|+.+.||+|+|+ +|... .+ ..+|+||++..|++|++++
T Consensus 60 s~DwR~~~-pVkdQG~CGSCWAFAa~~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~- 136 (291)
T 3ois_A 60 KVDLTPPF-QVYDQGRIGSCTANALAAAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL- 136 (291)
T ss_dssp EEECCCSS-CCCBCTTSSCHHHHHHHHHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-
T ss_pred ceecccCC-CcccCCCCccHHHHHHHHHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-
Confidence 34443335 9999999999999999999999876 56778899999998 67642 22 3468999999999999987
Q ss_pred CcCCCCCCCCCCCC---CcccCCC--------------CCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEeccccc
Q 036910 178 GLDTEEAYPYTGKD---GVCKFSS--------------ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFR 240 (314)
Q Consensus 178 Gi~~e~~yPY~~~~---~~c~~~~--------------~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~ 240 (314)
|+++|++|||.+.+ +.|++.+ ....+++.++..++. ++++||++|+++|||+++|++.++|+
T Consensus 137 Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~~~f~ 215 (291)
T 3ois_A 137 GVCPEKEWPYGDTPADPRTEEFPPGAPASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVYNSWV 215 (291)
T ss_dssp CCCBGGGSCCCCCCCCTTTCSCCTTCGGGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEEHHHH
T ss_pred CCCCHhhCCCCCCccccccccccccccccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEeccchh
Confidence 99999999999874 4566521 123467778888875 79999999999999999999988999
Q ss_pred ccCC--ceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeC
Q 036910 241 FYKS--GVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298 (314)
Q Consensus 241 ~y~~--Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 298 (314)
.|++ |||..+.|.. ...++|||+||||| ++++|||||||||++||++|||||+|+
T Consensus 216 ~y~~~~Gi~~~~~~~~-~~~~~Hav~iVGy~--~~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 216 GNNSLPVRIPLPTKND-TLEGGHAVLCVGYD--DEIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp GGGCCCSBCCCCCTTS-CEEEEEEEEEEEEE--TTTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred hcCCCCeEEeCCCCCC-CCcCCeEEEEEEEe--CCCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 9998 9998876643 22358999999997 467899999999999999999999996
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=3.1e-43 Score=334.15 Aligned_cols=200 Identities=21% Similarity=0.329 Sum_probs=152.1
Q ss_pred ccCccccCCCCchhHHHhhHHHHHHHHHHH-cCCCcccCH----------------HHHHhhhcC------------CCC
Q 036910 108 NISPVKDQGHCGSCWTFSTTGSLEAAYHQA-FGKGISLSE----------------QQLVDCAQA------------FNN 158 (314)
Q Consensus 108 nvtpVkdQg~cGsCwAfa~~~~lE~~~~~~-~g~~~~lS~----------------q~l~dc~~~------------~~~ 158 (314)
-+|||||||+||+|||||+++++|+.+.++ +++.+.||+ |+++||+.. ..+
T Consensus 59 ~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~~d~R~v~~l~~~ 138 (453)
T 2cb5_A 59 EGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMN 138 (453)
T ss_dssp CCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSHHHHHHHHC
T ss_pred CCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCCcchhhHHHhcCC
Confidence 389999999999999999999999999998 578999999 999999853 247
Q ss_pred CCCCCCChhhHHHHHHHcCCcCCCCCCCCCCCC---------------------------C------c------------
Q 036910 159 QGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD---------------------------G------V------------ 193 (314)
Q Consensus 159 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~------------ 193 (314)
.||+||.+..|+.++.+. |+++|++|||+... + .
T Consensus 139 ~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~~~k~~~l~~iy~ 217 (453)
T 2cb5_A 139 PANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFR 217 (453)
T ss_dssp TTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 899999999999999875 99999999998631 2 1
Q ss_pred ----c----------cCC-------------C-----CCcce--EeceeE------------------------------
Q 036910 194 ----C----------KFS-------------S-----ENVGV--QVLDSV------------------------------ 209 (314)
Q Consensus 194 ----c----------~~~-------------~-----~~~~~--~~~~~~------------------------------ 209 (314)
| ... + ..... .+.+++
T Consensus 218 il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v~~~~Nv~~g~~~ 297 (453)
T 2cb5_A 218 VVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVEYLSNMVGGRKT 297 (453)
T ss_dssp HHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEETTCCSSTTCCCC
T ss_pred HHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEEeecCcccccccc
Confidence 5 220 0 00011 222222
Q ss_pred ---EecCCC-HHHHHHHHHccCCeEEEEEecccccccCCceEecCCCC-------------------CCCCCCCeEEEEE
Q 036910 210 ---NITLGA-EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCG-------------------NTPMDVNHAVVAV 266 (314)
Q Consensus 210 ---~~~~~~-~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~-------------------~~~~~~~Hav~iV 266 (314)
+++..+ .+.++.+|..+|||++++++.. +.++++|||....|. ......+|||+||
T Consensus 298 ~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~-~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~~s~~~HAmliv 376 (453)
T 2cb5_A 298 LYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK-HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFT 376 (453)
T ss_dssp CEEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTTSCCCCEEEEEE
T ss_pred cccccCHHHHHHHHHHHHHcCCCEEEEEEeCh-hhccCCcEEcCccccchhhcCccccccCHHHHhhccCCCCCeEEEEE
Confidence 222211 1445578888999999999965 445699999865451 1122579999999
Q ss_pred Eee--ec-CCc-ceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 267 GYG--VE-DGV-PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 267 Gyg--~~-~g~-~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
||| .+ +|+ +|||||||||++||++|||+|+|+ .++.++..+++
T Consensus 377 Gyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~----wf~ey~~~vvV 423 (453)
T 2cb5_A 377 AVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE----WFSEYVYEVVV 423 (453)
T ss_dssp EEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH----HHHHHEEEEEE
T ss_pred EeccccccCCCccEEEEEcCcCCCcCcCceEEechh----hHhhceEEEEe
Confidence 999 65 687 999999999999999999999986 46655555554
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.4e-41 Score=323.22 Aligned_cols=200 Identities=21% Similarity=0.264 Sum_probs=139.4
Q ss_pred ccCccccCCCCchhHHHhhHHHHHHHHHHH-cCCCcccCH----------------HHHHhhhcCC----------CCCC
Q 036910 108 NISPVKDQGHCGSCWTFSTTGSLEAAYHQA-FGKGISLSE----------------QQLVDCAQAF----------NNQG 160 (314)
Q Consensus 108 nvtpVkdQg~cGsCwAfa~~~~lE~~~~~~-~g~~~~lS~----------------q~l~dc~~~~----------~~~g 160 (314)
-+|||||||+||+|||||+++++|+.+.++ +++.++||+ |+++||+... .+.|
T Consensus 64 ~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~r~v~~l~~~~g 143 (457)
T 2e01_A 64 DSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDSRLVQYLLAAPT 143 (457)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTSHHHHHHHHCTT
T ss_pred CccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccchhhhhhccCCC
Confidence 389999999999999999999999999998 788999999 7889997421 3789
Q ss_pred CCCCChhhHHHHHHHcCCcCCCCCCCC-CCC---------------------------------C---------------
Q 036910 161 CNGGLPSQAFEYIKYNGGLDTEEAYPY-TGK---------------------------------D--------------- 191 (314)
Q Consensus 161 C~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--------------- 191 (314)
|+||.+..++.++.+. |+++|++||| +.. .
T Consensus 144 cdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~~~~~~l~~iy~ 222 (457)
T 2e01_A 144 EDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVTLREQMQREIFR 222 (457)
T ss_dssp CSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHHHHHHHHHHHHH
Confidence 9999999999999876 9999999999 310 0
Q ss_pred ------CcccCCC-CCc----------------------------------------------ceEe-----------ce
Q 036910 192 ------GVCKFSS-ENV----------------------------------------------GVQV-----------LD 207 (314)
Q Consensus 192 ------~~c~~~~-~~~----------------------------------------------~~~~-----------~~ 207 (314)
|.|+... ... .+.+ ..
T Consensus 223 il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~~ 302 (457)
T 2e01_A 223 LMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDRLGNVLGGDAVI 302 (457)
T ss_dssp HHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETTCCSSTTCCCEE
T ss_pred HHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEeccCCeecCCcee
Confidence 0111100 000 0000 01
Q ss_pred eEEecCCC-HHHHHHHHHccCCeEEEEEecccccccCCceEecCCC-----------------CCCCCCCCeEEEEEEee
Q 036910 208 SVNITLGA-EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKC-----------------GNTPMDVNHAVVAVGYG 269 (314)
Q Consensus 208 ~~~~~~~~-~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~-----------------~~~~~~~~Hav~iVGyg 269 (314)
+.+++... .+.++.+|..+|||++++++.. |.+|++|||....| .......+|||+|||||
T Consensus 303 y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~-~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s~~~HAmlivGyg 381 (457)
T 2e01_A 303 YLNVDNETLSKLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESLMTAAMLITGCH 381 (457)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSCCCCEEEEEEEEE
T ss_pred EEEcCHHHHHHHHHHHHHhCCCEEEEEEcCH-hHcccCceecccccchhhcCcccccCHHHhhccCCCCCCeEEEEEEEE
Confidence 23333211 1455677888999999999964 77899999965432 01122579999999999
Q ss_pred ec-CCc--ceEEEEcCCCCCcCCCcEEEEEeCCCccccCCceeeeee
Q 036910 270 VE-DGV--PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 313 (314)
Q Consensus 270 ~~-~g~--~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~p~~ 313 (314)
.+ +|+ +|||||||||++||++|||+|+|+ .++.++.++++
T Consensus 382 ~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~ivV 424 (457)
T 2e01_A 382 VDETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIVV 424 (457)
T ss_dssp ECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEEE
T ss_pred eccCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEEEe
Confidence 86 788 899999999999999999999995 56666666654
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=4.6e-38 Score=292.97 Aligned_cols=192 Identities=21% Similarity=0.235 Sum_probs=139.1
Q ss_pred cccccCccccCCCCchhHHHhhHHHHHHHHHHHcCCCcccCHHHHHhhhcC----------CCCCCCCCCChhhHHHHHH
Q 036910 105 LGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA----------FNNQGCNGGLPSQAFEYIK 174 (314)
Q Consensus 105 l~~nvtpVkdQg~cGsCwAfa~~~~lE~~~~~~~g~~~~lS~q~l~dc~~~----------~~~~gC~GG~~~~a~~~~~ 174 (314)
+.+.+|||||||+||||||||+++++|+.+.+++++.+.||+|+|+||+.. ..+.||+||.+..|++|+.
T Consensus 18 i~~~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~ 97 (383)
T 3pw3_A 18 KENPITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGME 97 (383)
T ss_dssp EECCCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHH
T ss_pred cccCCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHH
Confidence 344599999999999999999999999999999999999999999999842 1357999999999999999
Q ss_pred HcCCcCCCCCCC------CCCCC--------------------Cc-------------------------cc--------
Q 036910 175 YNGGLDTEEAYP------YTGKD--------------------GV-------------------------CK-------- 195 (314)
Q Consensus 175 ~~~Gi~~e~~yP------Y~~~~--------------------~~-------------------------c~-------- 195 (314)
++ |+++|++|| +.... .. ++
T Consensus 98 k~-Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk 176 (383)
T 3pw3_A 98 TF-GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGK 176 (383)
T ss_dssp HT-CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTE
T ss_pred Hc-CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCC
Confidence 87 999999999 22110 00 00
Q ss_pred ------------CCCCC-------------cceEe--------ceeEEecCCC-HHHHHHHHHccCCeEEEEEecccccc
Q 036910 196 ------------FSSEN-------------VGVQV--------LDSVNITLGA-EDELQHAVGLVRPVSVAFEVVDGFRF 241 (314)
Q Consensus 196 ------------~~~~~-------------~~~~~--------~~~~~~~~~~-~~~ik~~l~~~gPV~v~~~~~~~f~~ 241 (314)
.+.+. ..+.+ -.+.+++... .+.+..+|..+.||..+.||.+.+..
T Consensus 177 ~~TP~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 177 EYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp EECHHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred CcCHHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 00000 00000 0122222111 13344567789999999999753333
Q ss_pred cCCceEecCCC-------------------------------------------CCCCCCCCeEEEEEEeee-cCCcceE
Q 036910 242 YKSGVYSSTKC-------------------------------------------GNTPMDVNHAVVAVGYGV-EDGVPYW 277 (314)
Q Consensus 242 y~~Gi~~~~~~-------------------------------------------~~~~~~~~Hav~iVGyg~-~~g~~yw 277 (314)
+.||...+.. ++.....+|||+|||||. ++|++||
T Consensus 257 -~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw 335 (383)
T 3pw3_A 257 -RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYY 335 (383)
T ss_dssp -TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEE
T ss_pred -CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEE
Confidence 8898843210 011224589999999997 5788999
Q ss_pred EEEcCCCCCcCCCcEEEEEeC
Q 036910 278 LIKNSWGENWGDHGYFKMEMG 298 (314)
Q Consensus 278 ivkNSWG~~WG~~Gy~~i~~~ 298 (314)
+||||||++||++||++|+++
T Consensus 336 ~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 336 MVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEECSBCSCSTTTTEEEEEHH
T ss_pred EEEeCCCCCCCcCCeEEecHH
Confidence 999999999999999999974
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=98.94 E-value=1.4e-09 Score=83.31 Aligned_cols=50 Identities=38% Similarity=0.604 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCCCcccccccc
Q 036910 59 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLN 108 (314)
Q Consensus 59 ~~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~~~~y~l~~n 108 (314)
...|++|+.+|+|.|.+.+|+..|+.||++|+++|++||....+|++++|
T Consensus 22 ~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN 71 (106)
T 3f75_P 22 QDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMN 71 (106)
T ss_dssp HHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCC
T ss_pred HHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCc
Confidence 46899999999999999999999999999999999999988889999987
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=98.82 E-value=4.5e-09 Score=76.59 Aligned_cols=48 Identities=21% Similarity=0.501 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHhhCCC----Ccccccccc
Q 036910 60 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLN 108 (314)
Q Consensus 60 ~~f~~f~~~~~k~y~~~~e~~~R~~~f~~n~~~i~~~n~~----~~~y~l~~n 108 (314)
..|++|+.+|+|.|.+.+|+..| .||++|++.|++||.. ..+|++++|
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N 59 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGIN 59 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCc
Confidence 57999999999999988899999 9999999999999975 357999987
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.42 E-value=0.0026 Score=52.10 Aligned_cols=131 Identities=18% Similarity=0.159 Sum_probs=89.9
Q ss_pred ccCCCCchhHHHhhHHHHHHHHHHH--------cCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCC
Q 036910 113 KDQGHCGSCWTFSTTGSLEAAYHQA--------FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184 (314)
Q Consensus 113 kdQg~cGsCwAfa~~~~lE~~~~~~--------~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~ 184 (314)
..||.-+=|-+|+.++.|-+..... ..-...+|+|+|.+ .|..+.+.++|.+.. |-..
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~----------t~~~~~q~Iky~~s~-G~~~--- 90 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKSQ-GRDI--- 90 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG----------CCBCHHHHHHHHHHT-TCCC---
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHHc-CcCh---
Confidence 5699999999999999887754211 11135677777765 366788999999865 4211
Q ss_pred CCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEE
Q 036910 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264 (314)
Q Consensus 185 yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~ 264 (314)
.+ .+ ...+.+++++.+.++.||.|...-.. ... .....+||++
T Consensus 91 -------------------~~---~n-r~ls~neV~~~i~~Nk~I~v~~~~v~----------e~~----~~~~~gHA~a 133 (183)
T 1pxv_A 91 -------------------HY---QE-GVPSYNQVDQLTKDNVGIMILAQSVS----------QNP----NDPHLGHALA 133 (183)
T ss_dssp -------------------EE---EE-SCCCHHHHHHHHHTTCCEEEEEECCC----------SST----TSCCCEEEEE
T ss_pred -------------------hH---hc-CCCCHHHHHHHHhcCCcEEEEccccc----------cCC----CCccCceeEE
Confidence 00 00 12357899999999999998875321 111 1124689999
Q ss_pred EEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeCC
Q 036910 265 AVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK 299 (314)
Q Consensus 265 iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 299 (314)
||||-..++.++.+|=|=|-. |++-++.+.
T Consensus 134 v~Gya~~~~~~~y~~WNPW~~-----~~~~~~a~S 163 (183)
T 1pxv_A 134 VVGNAKINDQEKLIYWNPWDT-----ELSIQDADS 163 (183)
T ss_dssp EEEEEEETTEEEEEEECTTCS-----SCEEEETTC
T ss_pred EEeeeecCCCeEEEEeCCccC-----CcEeecCCC
Confidence 999998888899999888743 777776543
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.29 E-value=0.0038 Score=56.38 Aligned_cols=129 Identities=19% Similarity=0.164 Sum_probs=87.4
Q ss_pred ccCCCCchhHHHhhHHHHHHHHHH--------HcCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCC
Q 036910 113 KDQGHCGSCWTFSTTGSLEAAYHQ--------AFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184 (314)
Q Consensus 113 kdQg~cGsCwAfa~~~~lE~~~~~--------~~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~ 184 (314)
..||.-+=|-+|+.++.|-+.... ...-...+|+++|.+ .|..+.+.++|++.. |...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~----------ts~~~~q~Iky~qsy-G~~~--- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKSQ-GRDI--- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG----------CCCCHHHHHHHHHHT-TEEE---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHHh-Ccch---
Confidence 569999999999999888764311 111134566666665 466788999999854 4311
Q ss_pred CCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEec-ccccccCCceEecCCCCCCCCCCCeEE
Q 036910 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAV 263 (314)
Q Consensus 185 yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~~f~~y~~Gi~~~~~~~~~~~~~~Hav 263 (314)
. .. ....+.+++++.+..+.||.|..+-. ++ + .....+||+
T Consensus 267 ---------------------~-~~-n~~ls~deVk~~id~Nk~I~v~~~~v~~~------~---------n~~~~gHAl 308 (367)
T 1x9y_A 267 ---------------------H-YQ-EGVPSYNQVDQLTKDNVGIMILAQSVSQN------P---------NDPHLGHAL 308 (367)
T ss_dssp ---------------------E-EE-ESCCCHHHHHHHHHTTCCEEEEEEETTSC------S---------SSCCCSEEE
T ss_pred ---------------------h-hh-cCCCCHHHHHHHHhcCCcEEEEccccccC------C---------CCccCceeE
Confidence 0 11 11235788999999999999988763 21 0 111468999
Q ss_pred EEEEeeecCCcceEEEEcCCCCCcCCCcEEEEEeC
Q 036910 264 VAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG 298 (314)
Q Consensus 264 ~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 298 (314)
+||||-..++.+|.++-|=|=. +++-++..
T Consensus 309 avvGyA~~~~~~~y~~WNPW~~-----~~~~~sa~ 338 (367)
T 1x9y_A 309 AVVGNAKINDQEKLIYWNPWDT-----ELSIQDAD 338 (367)
T ss_dssp EEEEEEEETTEEEEEEECTTCS-----SCEEEETT
T ss_pred EEEeccccCCCcEEEEecCccC-----CceeecCC
Confidence 9999987778899999888743 36655553
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.18 E-value=0.012 Score=47.99 Aligned_cols=120 Identities=22% Similarity=0.320 Sum_probs=83.8
Q ss_pred ccCCCCchhHHHhhHHHHHHHHHHH--------cCCCcccCHHHHHhhhcCCCCCCCCCCChhhHHHHHHHcCCcCCCCC
Q 036910 113 KDQGHCGSCWTFSTTGSLEAAYHQA--------FGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEA 184 (314)
Q Consensus 113 kdQg~cGsCwAfa~~~~lE~~~~~~--------~g~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~ 184 (314)
..||.-+=|-+|+.++.|-+..... ..-...+|+++|..+ |..+.+.++|+++.++ ..
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~----------~~t~~e~iky~~s~g~-~~--- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT----------GLTPREMIYFGQTQGR-SP--- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC----------CCCHHHHHHHHHHTTC-CC---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc----------CCCHHHHHHHHHHcCC-Ch---
Confidence 4699999999999999987754211 112468999999843 4567889999887632 10
Q ss_pred CCCCCCCCcccCCCCCcceEeceeEEecCCCHHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEE
Q 036910 185 YPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVV 264 (314)
Q Consensus 185 yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~ 264 (314)
. ......+.+++++.+.++.|+.|..+-.++ ..| ...+||++
T Consensus 82 -------------------~----~~n~~ls~~eV~~~~~~nk~i~i~~~~ve~----~~~-----------~~~gHAla 123 (174)
T 1cv8_A 82 -------------------Q----LLNRMTTYNEVDNLTKNNKGIAILGSRVES----RNG-----------MHAGHAMA 123 (174)
T ss_dssp -------------------E----EESSCCCHHHHHHHHHTTCCEEEEEEESSC----BTT-----------BCCEEEEE
T ss_pred -------------------h----hhcCCCCHHHHHHHHhcCCceEEEcccccC----CCC-----------CCCceeEE
Confidence 0 001113578899999999999887764211 011 14689999
Q ss_pred EEEeee-cCCcceEEEEcCCC
Q 036910 265 AVGYGV-EDGVPYWLIKNSWG 284 (314)
Q Consensus 265 iVGyg~-~~g~~ywivkNSWG 284 (314)
||||-. .+|.+|.++=|=|=
T Consensus 124 v~Gy~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 124 VVGNAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp EEEEEEETTSCEEEEEECTTC
T ss_pred EEeeeeecCCceEEEEeCCcc
Confidence 999998 57789999988873
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=90.22 E-value=0.86 Score=39.31 Aligned_cols=64 Identities=28% Similarity=0.372 Sum_probs=40.2
Q ss_pred EEecCCCHHHHHHHHHccCCeEEEEEec-c-----ccccc--CCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEE
Q 036910 209 VNITLGAEDELQHAVGLVRPVSVAFEVV-D-----GFRFY--KSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIK 280 (314)
Q Consensus 209 ~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~-----~f~~y--~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivk 280 (314)
.+++..+.++|++.|..+.||.|-.... . .|..+ .+|-.... ..+|+|+|+||++. ..+|-
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~~-------~~~H~VVl~GYd~~----~vyi~ 193 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSIT-------YNEHCVVLIGYDQE----SVYIR 193 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEEC-------TTEEEEEEEEECSS----EEEEE
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceeec-------cCCeEEEEEEEeCC----EEEEE
Confidence 4555557899999999999999977651 1 12111 13332211 24799999999762 34455
Q ss_pred cCC
Q 036910 281 NSW 283 (314)
Q Consensus 281 NSW 283 (314)
+.+
T Consensus 194 DP~ 196 (236)
T 3erv_A 194 DPL 196 (236)
T ss_dssp CTT
T ss_pred CCC
Confidence 554
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=53.37 E-value=29 Score=31.10 Aligned_cols=60 Identities=22% Similarity=0.350 Sum_probs=39.9
Q ss_pred HHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEEE
Q 036910 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME 296 (314)
Q Consensus 217 ~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~ 296 (314)
+.|++.|.++.||.+.-.-. . +.. ..++||.++=||..+ +||=+==.||-. .+|||.+.
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~-~------~~~---------~~~GHafV~DGY~~~---~~~H~NwGWgG~--~nGyy~l~ 297 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP-G------SMG---------QDAGHAFVIDGYNKA---GLVSVNWGWNGD--VDGYYKID 297 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC-----------------------CCCEEEEEEEECTT---SCEEEECSSTTT--TCEEECCT
T ss_pred HHHHHHHHhCCCEEEEEecC-C------CCC---------CCCceEEEEccccCC---CeEEEecCCCCC--CCceEecc
Confidence 56889999999987644221 1 110 136899999999753 577776666633 48999886
Q ss_pred e
Q 036910 297 M 297 (314)
Q Consensus 297 ~ 297 (314)
.
T Consensus 298 ~ 298 (321)
T 3bb7_A 298 L 298 (321)
T ss_dssp T
T ss_pred C
Confidence 3
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=49.75 E-value=37 Score=31.04 Aligned_cols=56 Identities=20% Similarity=0.375 Sum_probs=39.1
Q ss_pred HHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEE
Q 036910 216 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM 295 (314)
Q Consensus 216 ~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i 295 (314)
.+.|++.|.++.||.+.-.- . .++||.++=||+.+ +||=+==.||-. .+|||.+
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~-------------~--------~gGHAfV~DGy~~~---~~~H~NwGWgG~--~nGyy~l 342 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVG-------------K--------VGGHAFVIDGADGR---NFYHVNWGWGGV--SDGFFRL 342 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-------------T--------TEEEEEEEEEECSS---SEEEEECSSTTT--TCEEEES
T ss_pred HHHHHHHHHcCCCEEEEeec-------------C--------CCceEEEECcccCC---CeEEEEeCcCCC--CCcceec
Confidence 35688889999999654311 0 15899999999753 566665556543 5999998
Q ss_pred Ee
Q 036910 296 EM 297 (314)
Q Consensus 296 ~~ 297 (314)
.-
T Consensus 343 ~~ 344 (371)
T 1dki_A 343 DA 344 (371)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 52
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=47.49 E-value=50 Score=29.64 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=35.2
Q ss_pred HHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEeeec----CCcceEEEEcCCCC
Q 036910 216 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGE 285 (314)
Q Consensus 216 ~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~----~g~~ywivkNSWG~ 285 (314)
-+.|++++..+.+++.++.++.... . .......-..+||-.|.+..+- .+...-.|||-||.
T Consensus 210 ~~~l~~~~~~g~l~~~s~~~t~~~~------~--~~~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 210 YQIILKALERGSLLGCSINISDIRD------L--EAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE 275 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCCSSSST------T--CSBCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred HHHHHHHHHCCCeEEEEecCCCccc------h--hhhhccCCcCCceEEEeEEEEEecCCCceEEEEEeCCCCC
Confidence 3567777776555555544321110 0 0001111135899999998752 23578899999995
No 53
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=46.24 E-value=45 Score=29.98 Aligned_cols=27 Identities=26% Similarity=0.490 Sum_probs=21.8
Q ss_pred CCeEEEEEEeeec----CCcceEEEEcCCCC
Q 036910 259 VNHAVVAVGYGVE----DGVPYWLIKNSWGE 285 (314)
Q Consensus 259 ~~Hav~iVGyg~~----~g~~ywivkNSWG~ 285 (314)
.+||-.|.+...- ++...-.|||-||.
T Consensus 244 ~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 244 KGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred cCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 5899999998653 34578899999996
No 54
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=45.32 E-value=39 Score=29.28 Aligned_cols=56 Identities=20% Similarity=0.379 Sum_probs=40.1
Q ss_pred HHHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEeeecCCcceEEEEcCCCCCcCCCcEEEE
Q 036910 216 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM 295 (314)
Q Consensus 216 ~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i 295 (314)
.+.|++.|.++.||.++-.- + .++||.+|=||..+ +|+-|==.||-. .+|||.+
T Consensus 171 ~~~I~~eL~~grPV~~~G~~------------------~---~gGHAwViDGY~~~---~~~H~NwGWgG~--~nGYy~l 224 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG------------------K---VGGHAFVIDGADGR---NFYHVNWGWGGV--SDGFFRL 224 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE------------------T---TEEEEEEEEEEESS---SCEEEECSSTTT--TCEEECT
T ss_pred HHHHHHHHHcCCCEEEEeec------------------C---CCceEEEEcccccC---CEEEEEcCCCCC--CCceeec
Confidence 36788999999999876521 0 26899999999753 466665455531 6899988
Q ss_pred Ee
Q 036910 296 EM 297 (314)
Q Consensus 296 ~~ 297 (314)
..
T Consensus 225 ~~ 226 (261)
T 4d8b_A 225 DA 226 (261)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 55
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=39.70 E-value=71 Score=28.43 Aligned_cols=72 Identities=17% Similarity=0.293 Sum_probs=0.0
Q ss_pred HHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEeeec----CCcceEEEEcCCC-CCcC---
Q 036910 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWG-ENWG--- 288 (314)
Q Consensus 217 ~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~~----~g~~ywivkNSWG-~~WG--- 288 (314)
+.|++++..+.+++.++...+.- .........-..+||-.|++...- .+...-.|||-|| ..|-
T Consensus 206 ~~l~~~~~~g~l~~~~~~~~~~~--------~~~~~~~~GLv~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~w 277 (326)
T 2nqa_A 206 QIIRKALCAGSLLGCSIDVYSAA--------EAEAITSQKLVKSHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAW 277 (326)
T ss_dssp HHHHHHHHTTCEEEEECCCSSGG--------GTTCBCTTSCBSSCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTT
T ss_pred HHHHHHHhCCCceEEeecCCCcc--------cchhhhccCCccCceEEEEEEEEEecCCCceEEEEecCCCcCccccCCC
Q ss_pred ----------------------CCcEEEEE
Q 036910 289 ----------------------DHGYFKME 296 (314)
Q Consensus 289 ----------------------~~Gy~~i~ 296 (314)
++|-|||+
T Consensus 278 sd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 307 (326)
T 2nqa_A 278 SDDAPEWNHIDPRRKEELDKKVEDGEFWMS 307 (326)
T ss_dssp STTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CCCCccccccCHHHHHHhCCCCCCCEEEEE
No 56
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=33.08 E-value=21 Score=24.61 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=20.9
Q ss_pred cCccccCCCCchhHHHhhHHHHHHHHHHHc
Q 036910 109 ISPVKDQGHCGSCWTFSTTGSLEAAYHQAF 138 (314)
Q Consensus 109 vtpVkdQg~cGsCwAfa~~~~lE~~~~~~~ 138 (314)
+--|+=||.|++| ...-..+|..++..-
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~v 64 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREKI 64 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHHC
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHHC
Confidence 5567889999999 334468998887653
No 57
>2z79_A Endo-1,4-beta-xylanase A; glycoside hydrolase, glycosidase, xylan degradatio hydrolase; 1.30A {Bacillus subtilis} PDB: 2qz3_A 2dcy_A* 1xxn_A* 1bcx_A* 1xnb_A 1bvv_A 2b42_B 3hd8_B 1hv0_A 2bvv_A 1c5h_A 1c5i_A 1hv1_A 1xnc_A 2dcz_A 3exu_A* 2b46_X* 2b45_X*
Probab=26.99 E-value=44 Score=27.28 Aligned_cols=28 Identities=21% Similarity=0.464 Sum_probs=23.3
Q ss_pred CCeEEEEEEeeecCCcceEEEEcCCCCCc
Q 036910 259 VNHAVVAVGYGVEDGVPYWLIKNSWGENW 287 (314)
Q Consensus 259 ~~Hav~iVGyg~~~g~~ywivkNSWG~~W 287 (314)
++--+.|-||...+-..|.||. +||+..
T Consensus 62 Gn~yl~vYGWt~nPlvEYYIve-~~g~~~ 89 (185)
T 2z79_A 62 GNGYLTLYGWTRSPLIEYYVVD-SWGTYR 89 (185)
T ss_dssp SSEEEEEEEEEETTTEEEEEEE-EESSCC
T ss_pred CCEEEEEEecCCCCcEEEEEEe-eecccC
Confidence 5667999999998888999998 788633
No 58
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=23.96 E-value=1.8e+02 Score=28.83 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=0.0
Q ss_pred HHHHHHHHccCCeEEEEEecccccccCCceEecCCCCCCCCCCCeEEEEEEeee----cCCcceEEEEcCCCC-CcC---
Q 036910 217 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV----EDGVPYWLIKNSWGE-NWG--- 288 (314)
Q Consensus 217 ~~ik~~l~~~gPV~v~~~~~~~f~~y~~Gi~~~~~~~~~~~~~~Hav~iVGyg~----~~g~~ywivkNSWG~-~WG--- 288 (314)
+.|++++..+.+++.++.+.+.-.. .......-..+||-.|.+... ..+...-.|||-||. .|-
T Consensus 226 ~~l~~~~~~g~l~~~~~~~~~~~~~--------~~~~~~GL~~~HaYsvl~~~~v~~~~~~~~lv~lrNPWg~~ew~G~w 297 (714)
T 3bow_A 226 KIIQKALEKGSLLGCSIDITSAADS--------EAVTYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQVEWTGKW 297 (714)
T ss_dssp HHHHHHHHTTCEEEEECCSTTSCTT--------CCBCTTSCBTTSCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTT
T ss_pred HHHHHHHhCCCeEEEEcccCCcccc--------cchhcCCCcCCceEEEeeeEEeecCCCceEEEEEECCCCCcccCCCC
Q ss_pred ----------------------CCcEEEEE
Q 036910 289 ----------------------DHGYFKME 296 (314)
Q Consensus 289 ----------------------~~Gy~~i~ 296 (314)
++|-|||+
T Consensus 298 sd~s~~W~~~~~~~~~~l~~~~~dg~FWm~ 327 (714)
T 3bow_A 298 NDNCPSWNTVDPEVRANLTERQEDGEFWMS 327 (714)
T ss_dssp STTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CCCCccccccCHHHHHHhCCCCCCCeEEEE
No 59
>2j4t_A Angiogenin-4; angiogenesis, endonuclease, differentiation, cancer, nuclease, hydrolase, ribonuclease, developmental protein; 2.02A {Mus musculus}
Probab=22.54 E-value=37 Score=26.58 Aligned_cols=10 Identities=20% Similarity=0.447 Sum_probs=7.2
Q ss_pred HHHHHHHHhC
Q 036910 61 SFARFARRYG 70 (314)
Q Consensus 61 ~f~~f~~~~~ 70 (314)
.++.|+++|=
T Consensus 28 ~~~~F~~qHi 37 (144)
T 2j4t_A 28 RYEKFLRQHY 37 (144)
T ss_dssp HHHHHHHHHB
T ss_pred HHHHHHHHeE
Confidence 4778888773
Done!