Query 036911
Match_columns 359
No_of_seqs 169 out of 672
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 10:48:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036911.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036911hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efj_A 3,7-dimethylxanthine me 100.0 2.1E-92 7.2E-97 697.4 29.7 353 1-359 1-378 (384)
2 1m6e_X S-adenosyl-L-methionnin 100.0 5.9E-92 2E-96 689.1 28.8 341 1-359 1-357 (359)
3 3b5i_A S-adenosyl-L-methionine 100.0 2.9E-89 9.9E-94 674.1 27.5 350 1-357 1-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.7 3E-16 1E-20 146.8 17.4 251 7-358 24-277 (279)
5 2p35_A Trans-aconitate 2-methy 99.7 5.3E-16 1.8E-20 142.6 16.1 243 15-358 8-258 (259)
6 2yqz_A Hypothetical protein TT 99.6 7.8E-14 2.7E-18 128.1 19.5 219 50-359 39-262 (263)
7 3bus_A REBM, methyltransferase 99.4 4.3E-12 1.5E-16 117.5 18.7 193 50-336 61-256 (273)
8 3dtn_A Putative methyltransfer 99.4 8.7E-12 3E-16 112.8 20.2 170 49-281 43-215 (234)
9 3hem_A Cyclopropane-fatty-acyl 99.4 1.7E-11 5.7E-16 115.8 20.3 217 50-355 72-301 (302)
10 3f4k_A Putative methyltransfer 99.4 1.2E-11 4E-16 113.4 17.4 208 50-359 46-257 (257)
11 1vl5_A Unknown conserved prote 99.4 1.7E-12 5.8E-17 119.7 9.7 154 50-283 37-193 (260)
12 2o57_A Putative sarcosine dime 99.3 1.8E-11 6.2E-16 114.9 15.9 151 50-281 82-235 (297)
13 3kkz_A Uncharacterized protein 99.3 4.2E-11 1.4E-15 110.8 17.8 150 49-281 45-197 (267)
14 3ujc_A Phosphoethanolamine N-m 99.3 1.6E-10 5.3E-15 105.9 20.0 193 50-339 55-249 (266)
15 4hg2_A Methyltransferase type 99.3 2.6E-11 8.9E-16 113.2 14.4 103 49-216 38-140 (257)
16 1xxl_A YCGJ protein; structura 99.3 2E-11 6.8E-16 111.5 13.0 155 49-283 20-177 (239)
17 4htf_A S-adenosylmethionine-de 99.3 1.6E-11 5.4E-16 114.8 12.6 165 49-283 67-235 (285)
18 2aot_A HMT, histamine N-methyl 99.3 2E-11 6.7E-16 115.0 12.8 158 50-278 52-219 (292)
19 4gek_A TRNA (CMO5U34)-methyltr 99.3 2.9E-11 9.9E-16 113.0 13.8 163 50-275 70-240 (261)
20 3hnr_A Probable methyltransfer 99.3 2.4E-11 8.2E-16 108.7 12.7 161 50-284 45-205 (220)
21 3ege_A Putative methyltransfer 99.3 5.2E-11 1.8E-15 110.2 14.1 197 50-340 34-232 (261)
22 1kpg_A CFA synthase;, cyclopro 99.3 5E-10 1.7E-14 104.5 20.8 156 50-280 64-228 (287)
23 3mgg_A Methyltransferase; NYSG 99.2 9.4E-11 3.2E-15 108.7 14.8 162 49-284 36-202 (276)
24 1pjz_A Thiopurine S-methyltran 99.2 5.8E-11 2E-15 106.2 12.5 142 50-282 22-178 (203)
25 3dli_A Methyltransferase; PSI- 99.2 5.6E-11 1.9E-15 108.2 12.5 144 49-281 40-185 (240)
26 3h2b_A SAM-dependent methyltra 99.2 1.1E-10 3.8E-15 103.2 13.5 143 51-282 42-184 (203)
27 3lcc_A Putative methyl chlorid 99.2 8.9E-11 3E-15 106.4 13.1 145 51-284 67-211 (235)
28 3l8d_A Methyltransferase; stru 99.2 2.7E-10 9.1E-15 103.2 16.0 150 49-281 52-201 (242)
29 1nkv_A Hypothetical protein YJ 99.2 2.9E-10 9.8E-15 104.0 16.2 148 50-279 36-186 (256)
30 3ou2_A SAM-dependent methyltra 99.2 2.5E-10 8.5E-15 101.4 15.3 158 50-281 46-206 (218)
31 3sm3_A SAM-dependent methyltra 99.2 2.4E-10 8E-15 102.6 14.3 177 49-284 29-211 (235)
32 1xtp_A LMAJ004091AAA; SGPP, st 99.2 1.8E-10 6E-15 105.1 12.9 146 50-280 93-238 (254)
33 2fk8_A Methoxy mycolic acid sy 99.2 3.9E-10 1.3E-14 107.1 15.4 209 50-354 90-311 (318)
34 3g5l_A Putative S-adenosylmeth 99.2 2E-10 6.9E-15 105.1 12.5 163 50-281 44-217 (253)
35 2p7i_A Hypothetical protein; p 99.2 5.6E-10 1.9E-14 100.8 15.2 154 50-281 42-200 (250)
36 3e8s_A Putative SAM dependent 99.2 5E-10 1.7E-14 99.8 14.4 151 50-279 52-208 (227)
37 3dlc_A Putative S-adenosyl-L-m 99.2 1.6E-10 5.6E-15 102.4 11.1 156 51-279 44-202 (219)
38 3dh0_A SAM dependent methyltra 99.1 3.6E-10 1.2E-14 100.9 12.4 143 50-281 37-182 (219)
39 2gb4_A Thiopurine S-methyltran 99.1 1.6E-09 5.4E-14 100.7 17.2 142 50-282 68-229 (252)
40 3vc1_A Geranyl diphosphate 2-C 99.1 3.3E-10 1.1E-14 107.6 12.5 151 50-281 117-270 (312)
41 3e23_A Uncharacterized protein 99.1 7E-10 2.4E-14 98.7 13.5 141 50-281 43-183 (211)
42 3bkx_A SAM-dependent methyltra 99.1 2.7E-09 9.1E-14 98.7 17.7 169 50-280 43-219 (275)
43 3g5t_A Trans-aconitate 3-methy 99.1 2.6E-10 8.9E-15 107.4 10.6 151 50-273 36-197 (299)
44 2qe6_A Uncharacterized protein 99.1 3.3E-09 1.1E-13 99.6 17.7 158 50-286 77-249 (274)
45 2a14_A Indolethylamine N-methy 99.1 7.6E-10 2.6E-14 102.7 12.8 87 143-282 154-240 (263)
46 2g72_A Phenylethanolamine N-me 99.1 4.2E-10 1.4E-14 105.5 11.0 90 141-283 170-259 (289)
47 1ri5_A MRNA capping enzyme; me 99.1 1.5E-09 5.1E-14 101.1 14.6 161 49-281 63-251 (298)
48 3bgv_A MRNA CAP guanine-N7 met 99.1 7.3E-10 2.5E-14 105.1 12.5 167 50-281 34-233 (313)
49 1vlm_A SAM-dependent methyltra 99.1 4.2E-09 1.4E-13 94.5 16.8 142 51-281 48-189 (219)
50 3mcz_A O-methyltransferase; ad 99.1 4.8E-09 1.6E-13 101.0 17.5 155 51-276 180-335 (352)
51 3i53_A O-methyltransferase; CO 99.1 3.3E-09 1.1E-13 101.5 16.1 150 50-280 169-321 (332)
52 3gwz_A MMCR; methyltransferase 99.1 5.4E-09 1.8E-13 101.9 17.8 149 49-279 201-355 (369)
53 3reo_A (ISO)eugenol O-methyltr 99.0 7.6E-09 2.6E-13 100.9 18.6 155 49-281 202-356 (368)
54 3cc8_A Putative methyltransfer 99.0 2.4E-09 8.3E-14 95.5 13.8 154 50-283 32-188 (230)
55 3dp7_A SAM-dependent methyltra 99.0 2E-09 7E-14 104.7 14.1 160 50-278 179-340 (363)
56 3p9c_A Caffeic acid O-methyltr 99.0 6.9E-09 2.4E-13 101.1 17.6 155 49-281 200-354 (364)
57 3lst_A CALO1 methyltransferase 99.0 3.6E-09 1.2E-13 102.2 14.8 153 49-279 183-335 (348)
58 4fsd_A Arsenic methyltransfera 99.0 2.5E-09 8.5E-14 104.9 13.4 110 50-216 83-208 (383)
59 3bkw_A MLL3908 protein, S-aden 99.0 9.2E-10 3.1E-14 99.5 9.0 169 50-280 43-214 (243)
60 2ex4_A Adrenal gland protein A 99.0 2.5E-09 8.6E-14 97.3 11.6 147 50-280 79-225 (241)
61 3pfg_A N-methyltransferase; N, 99.0 5.2E-09 1.8E-13 96.3 13.6 105 49-214 49-154 (263)
62 1y8c_A S-adenosylmethionine-de 99.0 2.8E-09 9.7E-14 96.1 11.4 107 50-214 37-145 (246)
63 3g2m_A PCZA361.24; SAM-depende 99.0 1.7E-09 6E-14 101.7 10.3 172 51-282 83-276 (299)
64 3giw_A Protein of unknown func 99.0 1.6E-08 5.4E-13 95.3 16.6 176 33-286 63-254 (277)
65 4a6d_A Hydroxyindole O-methylt 99.0 1.5E-08 5E-13 98.4 16.8 154 50-279 179-333 (353)
66 3ocj_A Putative exported prote 99.0 4.2E-09 1.4E-13 99.6 12.2 162 49-279 117-290 (305)
67 2gs9_A Hypothetical protein TT 99.0 1.2E-08 4.1E-13 90.5 14.5 134 50-267 36-170 (211)
68 3jwh_A HEN1; methyltransferase 98.9 4.4E-09 1.5E-13 94.0 11.5 150 50-277 29-189 (217)
69 2r3s_A Uncharacterized protein 98.9 1.4E-08 4.7E-13 96.8 15.2 159 49-279 164-322 (335)
70 4e2x_A TCAB9; kijanose, tetron 98.9 7.1E-10 2.4E-14 109.4 6.4 146 50-281 107-254 (416)
71 3jwg_A HEN1, methyltransferase 98.9 8.8E-09 3E-13 92.0 13.0 152 50-279 29-191 (219)
72 2kw5_A SLR1183 protein; struct 98.9 4.9E-09 1.7E-13 92.4 11.0 141 53-284 32-175 (202)
73 3i9f_A Putative type 11 methyl 98.9 7.8E-09 2.7E-13 88.6 11.8 132 50-280 17-148 (170)
74 1fp1_D Isoliquiritigenin 2'-O- 98.9 2.8E-08 9.6E-13 96.7 16.4 150 49-280 208-360 (372)
75 2vdw_A Vaccinia virus capping 98.9 9.8E-09 3.3E-13 97.8 12.6 163 49-281 47-247 (302)
76 1qzz_A RDMB, aclacinomycin-10- 98.9 1.9E-08 6.5E-13 97.5 14.2 158 50-282 182-341 (374)
77 1x19_A CRTF-related protein; m 98.9 2.6E-08 8.9E-13 96.4 15.0 159 49-280 189-348 (359)
78 3bxo_A N,N-dimethyltransferase 98.9 2.9E-08 1E-12 89.3 14.2 107 49-216 39-146 (239)
79 2ip2_A Probable phenazine-spec 98.9 4.8E-08 1.6E-12 93.3 15.8 152 52-279 169-321 (334)
80 3gu3_A Methyltransferase; alph 98.8 3.6E-08 1.2E-12 92.2 14.1 161 49-279 21-189 (284)
81 2i62_A Nicotinamide N-methyltr 98.8 1.9E-08 6.6E-13 92.0 11.9 99 133-284 141-243 (265)
82 2zfu_A Nucleomethylin, cerebra 98.8 2.7E-08 9.1E-13 88.6 12.3 112 50-279 67-178 (215)
83 2avn_A Ubiquinone/menaquinone 98.8 6.4E-09 2.2E-13 95.9 8.5 156 50-281 54-214 (260)
84 3ofk_A Nodulation protein S; N 98.8 1.1E-08 3.8E-13 91.1 9.3 107 50-214 51-157 (216)
85 1zg3_A Isoflavanone 4'-O-methy 98.8 3.7E-08 1.3E-12 95.3 13.0 151 50-279 193-346 (358)
86 1tw3_A COMT, carminomycin 4-O- 98.8 5.3E-08 1.8E-12 93.9 14.1 158 50-282 183-341 (360)
87 2p8j_A S-adenosylmethionine-de 98.8 2.6E-08 9E-13 87.9 10.7 151 50-278 23-181 (209)
88 2xvm_A Tellurite resistance pr 98.8 3.9E-08 1.3E-12 85.8 11.6 138 51-280 33-173 (199)
89 3ggd_A SAM-dependent methyltra 98.8 5.7E-08 1.9E-12 88.2 12.9 158 50-281 56-220 (245)
90 1ve3_A Hypothetical protein PH 98.8 1.5E-08 5.3E-13 90.4 8.9 105 50-214 38-145 (227)
91 3g07_A 7SK snRNA methylphospha 98.7 1.2E-08 4.1E-13 96.2 7.5 47 141-211 173-220 (292)
92 1fp2_A Isoflavone O-methyltran 98.7 1.3E-07 4.3E-12 91.4 14.0 150 50-279 188-340 (352)
93 3m70_A Tellurite resistance pr 98.7 7.5E-08 2.6E-12 89.7 11.6 137 50-279 120-259 (286)
94 2ld4_A Anamorsin; methyltransf 98.7 1.8E-07 6.2E-12 80.8 13.1 72 141-276 59-131 (176)
95 3cgg_A SAM-dependent methyltra 98.7 1.5E-07 5.2E-12 81.3 12.3 129 49-279 45-174 (195)
96 4df3_A Fibrillarin-like rRNA/T 98.7 6.8E-08 2.3E-12 88.9 10.0 108 51-214 78-185 (233)
97 3mq2_A 16S rRNA methyltransfer 98.7 1.3E-07 4.5E-12 84.4 11.5 150 50-281 27-185 (218)
98 3hp7_A Hemolysin, putative; st 98.7 2.4E-07 8.2E-12 87.9 13.4 144 50-280 85-232 (291)
99 3d2l_A SAM-dependent methyltra 98.6 9.1E-08 3.1E-12 86.3 9.8 105 51-214 34-140 (243)
100 3q87_B N6 adenine specific DNA 98.6 3.9E-07 1.3E-11 78.8 13.1 129 51-283 24-152 (170)
101 1yzh_A TRNA (guanine-N(7)-)-me 98.6 1.1E-07 3.8E-12 84.9 9.1 164 51-278 42-211 (214)
102 3thr_A Glycine N-methyltransfe 98.6 1.1E-07 3.7E-12 88.7 8.7 111 50-213 57-177 (293)
103 3grz_A L11 mtase, ribosomal pr 98.6 2.2E-07 7.4E-12 82.2 10.0 122 50-279 60-184 (205)
104 3opn_A Putative hemolysin; str 98.6 5E-08 1.7E-12 89.4 5.6 144 50-280 37-184 (232)
105 3id6_C Fibrillarin-like rRNA/T 98.5 1.3E-07 4.4E-12 87.0 7.4 61 17-98 50-110 (232)
106 2fca_A TRNA (guanine-N(7)-)-me 98.5 1.5E-07 5E-12 84.6 7.0 110 51-211 39-153 (213)
107 3dxy_A TRNA (guanine-N(7)-)-me 98.5 1.4E-07 4.9E-12 85.4 6.8 135 23-211 3-150 (218)
108 2pxx_A Uncharacterized protein 98.5 3.1E-07 1E-11 80.9 8.7 124 49-216 41-164 (215)
109 3iv6_A Putative Zn-dependent a 98.5 1.2E-07 4E-12 88.7 6.2 100 50-212 45-149 (261)
110 1wzn_A SAM-dependent methyltra 98.5 1.4E-06 5E-11 79.1 12.6 105 50-213 41-147 (252)
111 1ej0_A FTSJ; methyltransferase 98.5 5.7E-07 1.9E-11 76.1 9.0 112 50-216 22-141 (180)
112 3hm2_A Precorrin-6Y C5,15-meth 98.5 4E-07 1.4E-11 78.0 8.1 101 50-214 25-130 (178)
113 3p2e_A 16S rRNA methylase; met 98.4 3.3E-07 1.1E-11 83.3 7.5 158 50-283 24-188 (225)
114 2plw_A Ribosomal RNA methyltra 98.4 1.1E-06 3.7E-11 77.1 10.6 113 50-216 22-159 (201)
115 1fbn_A MJ fibrillarin homologu 98.4 9E-07 3.1E-11 80.0 10.2 102 50-212 74-179 (230)
116 3eey_A Putative rRNA methylase 98.4 1E-06 3.4E-11 77.2 10.0 116 51-214 23-142 (197)
117 3q7e_A Protein arginine N-meth 98.4 1.4E-06 4.9E-11 84.3 11.8 105 51-209 67-171 (349)
118 3e05_A Precorrin-6Y C5,15-meth 98.4 3.4E-07 1.1E-11 80.9 6.7 101 50-212 40-143 (204)
119 3mti_A RRNA methylase; SAM-dep 98.4 1.8E-06 6E-11 74.9 10.0 114 49-214 21-138 (185)
120 2nxc_A L11 mtase, ribosomal pr 98.4 1.4E-06 4.6E-11 80.5 9.6 121 50-279 120-243 (254)
121 3r0q_C Probable protein argini 98.3 3.2E-06 1.1E-10 82.6 12.5 108 50-212 63-170 (376)
122 1zx0_A Guanidinoacetate N-meth 98.3 1.3E-06 4.5E-11 79.0 8.9 109 50-212 60-171 (236)
123 3ckk_A TRNA (guanine-N(7)-)-me 98.3 1.6E-06 5.5E-11 79.3 8.7 119 50-211 46-168 (235)
124 3dmg_A Probable ribosomal RNA 98.3 3.1E-06 1.1E-10 83.1 11.1 106 50-212 233-341 (381)
125 1nt2_A Fibrillarin-like PRE-rR 98.3 3.2E-06 1.1E-10 75.9 10.0 103 50-212 57-162 (210)
126 3m33_A Uncharacterized protein 98.3 2.1E-06 7.2E-11 77.3 8.8 90 50-208 48-139 (226)
127 3lbf_A Protein-L-isoaspartate 98.3 2.5E-06 8.4E-11 75.4 9.1 97 50-213 77-176 (210)
128 1p91_A Ribosomal RNA large sub 98.2 5.6E-06 1.9E-10 76.1 11.2 99 50-216 85-183 (269)
129 2fyt_A Protein arginine N-meth 98.2 2.5E-06 8.4E-11 82.3 9.0 105 50-208 64-168 (340)
130 1vbf_A 231AA long hypothetical 98.2 4.7E-06 1.6E-10 74.7 10.1 99 50-214 70-168 (231)
131 3evz_A Methyltransferase; NYSG 98.2 9.6E-06 3.3E-10 72.6 11.9 123 49-213 54-181 (230)
132 3fzg_A 16S rRNA methylase; met 98.2 7.9E-07 2.7E-11 79.4 4.5 102 49-212 48-152 (200)
133 3orh_A Guanidinoacetate N-meth 98.2 1.6E-06 5.6E-11 79.0 6.6 108 49-210 59-169 (236)
134 4dcm_A Ribosomal RNA large sub 98.2 1.3E-06 4.5E-11 85.6 6.0 110 51-212 223-335 (375)
135 1xdz_A Methyltransferase GIDB; 98.2 3.5E-06 1.2E-10 76.6 8.3 98 50-210 70-173 (240)
136 1l3i_A Precorrin-6Y methyltran 98.2 2.5E-06 8.4E-11 73.4 6.9 99 50-212 33-135 (192)
137 2yxe_A Protein-L-isoaspartate 98.2 5.8E-06 2E-10 73.3 9.5 99 50-212 77-178 (215)
138 3p9n_A Possible methyltransfer 98.2 3.3E-06 1.1E-10 73.6 7.8 108 50-216 44-158 (189)
139 1dus_A MJ0882; hypothetical pr 98.2 4.9E-06 1.7E-10 71.6 8.3 107 50-216 52-162 (194)
140 3mb5_A SAM-dependent methyltra 98.2 5.5E-06 1.9E-10 75.5 8.9 101 50-213 93-196 (255)
141 1g6q_1 HnRNP arginine N-methyl 98.1 1.4E-05 4.9E-10 76.4 12.1 104 51-208 39-142 (328)
142 2frn_A Hypothetical protein PH 98.1 1.6E-05 5.5E-10 74.3 11.8 127 51-279 126-256 (278)
143 4dzr_A Protein-(glutamine-N5) 98.1 1.8E-06 6.2E-11 75.8 4.9 133 49-216 29-169 (215)
144 1af7_A Chemotaxis receptor met 98.1 6.3E-06 2.2E-10 77.4 8.6 49 134-209 201-250 (274)
145 1yb2_A Hypothetical protein TA 98.1 2.1E-05 7.1E-10 73.0 11.9 100 50-211 110-211 (275)
146 1i1n_A Protein-L-isoaspartate 98.1 1.3E-05 4.3E-10 71.7 9.9 102 50-214 77-185 (226)
147 1jsx_A Glucose-inhibited divis 98.1 6.2E-06 2.1E-10 72.6 7.7 97 51-211 66-165 (207)
148 2nyu_A Putative ribosomal RNA 98.1 4.3E-06 1.5E-10 72.8 6.5 118 50-215 22-149 (196)
149 1jg1_A PIMT;, protein-L-isoasp 98.1 6.1E-06 2.1E-10 74.7 7.8 98 50-214 91-192 (235)
150 2ipx_A RRNA 2'-O-methyltransfe 98.1 7.7E-06 2.6E-10 73.8 8.5 105 50-213 77-184 (233)
151 3lpm_A Putative methyltransfer 98.1 3.3E-05 1.1E-09 70.9 12.8 123 50-211 49-176 (259)
152 1g8a_A Fibrillarin-like PRE-rR 98.1 2.8E-05 9.7E-10 69.6 12.0 103 50-211 73-178 (227)
153 2b25_A Hypothetical protein; s 98.1 5.9E-06 2E-10 79.0 7.9 162 50-281 105-282 (336)
154 2pjd_A Ribosomal RNA small sub 98.1 1.8E-06 6E-11 83.2 4.2 105 51-212 197-304 (343)
155 3njr_A Precorrin-6Y methylase; 98.1 7.8E-06 2.7E-10 72.8 7.9 99 50-213 55-156 (204)
156 1dl5_A Protein-L-isoaspartate 98.1 7.1E-06 2.4E-10 78.0 8.0 101 50-214 75-178 (317)
157 2ozv_A Hypothetical protein AT 98.1 1E-05 3.4E-10 74.9 8.8 123 50-212 36-171 (260)
158 2pwy_A TRNA (adenine-N(1)-)-me 98.1 3.5E-05 1.2E-09 69.9 12.3 100 50-212 96-199 (258)
159 3bwc_A Spermidine synthase; SA 98.1 2.2E-05 7.6E-10 74.4 11.2 115 49-212 94-211 (304)
160 3g89_A Ribosomal RNA small sub 98.0 1.1E-05 3.6E-10 74.4 8.5 99 50-211 80-184 (249)
161 2pbf_A Protein-L-isoaspartate 98.0 8.1E-06 2.8E-10 73.1 7.5 105 50-213 80-195 (227)
162 2yxd_A Probable cobalt-precorr 98.0 1.9E-05 6.6E-10 67.3 9.3 72 50-154 35-109 (183)
163 1i9g_A Hypothetical protein RV 98.0 2.9E-05 9.9E-10 71.7 11.1 103 50-213 99-205 (280)
164 3sso_A Methyltransferase; macr 98.0 1.2E-05 4E-10 79.5 8.8 99 50-213 216-326 (419)
165 1r18_A Protein-L-isoaspartate( 98.0 1.7E-05 5.7E-10 71.2 9.1 108 51-214 85-197 (227)
166 3adn_A Spermidine synthase; am 98.0 3.5E-05 1.2E-09 73.0 11.0 117 49-214 82-201 (294)
167 3uwp_A Histone-lysine N-methyl 98.0 9.6E-06 3.3E-10 80.4 7.1 114 50-212 173-289 (438)
168 4hc4_A Protein arginine N-meth 98.0 3.9E-05 1.3E-09 75.2 11.2 137 16-209 50-187 (376)
169 3htx_A HEN1; HEN1, small RNA m 98.0 3.2E-05 1.1E-09 82.4 11.3 110 50-214 721-837 (950)
170 3gjy_A Spermidine synthase; AP 98.0 3.5E-05 1.2E-09 73.8 10.6 114 49-214 88-203 (317)
171 1o54_A SAM-dependent O-methylt 97.9 1.6E-05 5.6E-10 73.7 7.9 99 51-212 113-214 (277)
172 2esr_A Methyltransferase; stru 97.9 2.1E-05 7.3E-10 67.4 7.8 107 50-216 31-143 (177)
173 2gpy_A O-methyltransferase; st 97.9 2.3E-05 8E-10 70.5 8.4 101 51-212 55-161 (233)
174 2b3t_A Protein methyltransfera 97.9 3E-05 1E-09 71.9 9.3 124 50-211 109-238 (276)
175 3fpf_A Mtnas, putative unchara 97.9 5.1E-05 1.7E-09 72.0 10.8 99 49-211 121-222 (298)
176 3tfw_A Putative O-methyltransf 97.9 1.7E-05 5.8E-10 72.7 6.9 105 50-214 63-173 (248)
177 3ntv_A MW1564 protein; rossman 97.9 2E-05 6.8E-10 71.3 7.3 102 50-212 71-177 (232)
178 3u81_A Catechol O-methyltransf 97.9 9.6E-06 3.3E-10 72.6 5.0 107 50-214 58-173 (221)
179 3gdh_A Trimethylguanosine synt 97.9 3.2E-06 1.1E-10 76.4 1.9 82 50-163 78-162 (241)
180 2h00_A Methyltransferase 10 do 97.9 7E-05 2.4E-09 68.2 10.7 163 51-279 66-237 (254)
181 1o9g_A RRNA methyltransferase; 97.9 0.00011 3.7E-09 66.9 11.9 49 142-210 165-213 (250)
182 2vdv_E TRNA (guanine-N(7)-)-me 97.8 4.3E-05 1.5E-09 69.6 8.7 118 50-211 49-173 (246)
183 2y1w_A Histone-arginine methyl 97.8 4.6E-05 1.6E-09 73.5 9.3 106 50-211 50-155 (348)
184 3dr5_A Putative O-methyltransf 97.8 1.1E-05 3.7E-10 73.0 4.5 100 52-211 58-163 (221)
185 2xyq_A Putative 2'-O-methyl tr 97.8 0.00011 3.9E-09 69.4 11.6 109 50-216 63-176 (290)
186 1uir_A Polyamine aminopropyltr 97.8 3.3E-05 1.1E-09 73.6 7.6 118 49-214 76-198 (314)
187 3bzb_A Uncharacterized protein 97.8 9.2E-05 3.1E-09 69.1 9.7 114 51-215 80-209 (281)
188 3dou_A Ribosomal RNA large sub 97.8 7.4E-05 2.5E-09 65.9 8.5 108 50-215 25-143 (191)
189 1ws6_A Methyltransferase; stru 97.8 2.7E-05 9.1E-10 65.8 5.3 103 50-216 41-152 (171)
190 2fhp_A Methylase, putative; al 97.7 3.6E-05 1.2E-09 66.2 6.2 107 50-216 44-159 (187)
191 2ift_A Putative methylase HI07 97.7 3.4E-05 1.2E-09 68.3 6.1 104 51-214 54-166 (201)
192 2fpo_A Methylase YHHF; structu 97.7 0.00011 3.6E-09 65.1 9.4 104 51-215 55-164 (202)
193 3r3h_A O-methyltransferase, SA 97.7 4.1E-05 1.4E-09 70.1 6.9 108 50-214 60-173 (242)
194 1u2z_A Histone-lysine N-methyl 97.7 4E-05 1.4E-09 76.5 6.8 112 50-210 242-358 (433)
195 2bm8_A Cephalosporin hydroxyla 97.7 4.9E-05 1.7E-09 69.3 6.8 102 51-212 82-188 (236)
196 2hnk_A SAM-dependent O-methylt 97.7 4.1E-05 1.4E-09 69.3 6.0 34 51-98 61-94 (239)
197 2o07_A Spermidine synthase; st 97.7 8.3E-05 2.9E-09 70.6 8.1 115 49-213 94-211 (304)
198 3duw_A OMT, O-methyltransferas 97.7 2.8E-05 9.7E-10 69.2 4.6 104 50-213 58-169 (223)
199 1inl_A Spermidine synthase; be 97.7 4.5E-05 1.5E-09 72.1 5.8 114 49-211 89-205 (296)
200 3tma_A Methyltransferase; thum 97.6 0.00012 4.2E-09 70.4 8.3 113 50-212 203-318 (354)
201 3tr6_A O-methyltransferase; ce 97.6 4.4E-05 1.5E-09 68.0 4.8 103 51-213 65-176 (225)
202 1xj5_A Spermidine synthase 1; 97.6 0.00013 4.5E-09 70.2 8.2 113 49-211 119-235 (334)
203 2p41_A Type II methyltransfera 97.6 4.4E-05 1.5E-09 72.6 4.7 53 135-215 140-195 (305)
204 2i7c_A Spermidine synthase; tr 97.6 0.00017 5.7E-09 67.6 8.6 110 49-212 77-193 (283)
205 2b2c_A Spermidine synthase; be 97.6 0.00015 5.1E-09 69.2 8.3 109 49-211 107-222 (314)
206 2oxt_A Nucleoside-2'-O-methylt 97.6 0.00011 3.8E-09 68.4 7.2 112 50-213 74-187 (265)
207 2pt6_A Spermidine synthase; tr 97.6 0.00019 6.6E-09 68.6 9.0 110 49-212 115-231 (321)
208 1iy9_A Spermidine synthase; ro 97.6 0.00028 9.6E-09 65.8 9.7 114 49-212 74-190 (275)
209 1mjf_A Spermidine synthase; sp 97.6 0.00016 5.5E-09 67.6 8.0 110 49-213 74-195 (281)
210 1ixk_A Methyltransferase; open 97.5 0.00018 6.1E-09 68.5 8.1 125 51-214 119-249 (315)
211 2wa2_A Non-structural protein 97.5 7.8E-05 2.7E-09 69.9 5.4 112 50-213 82-195 (276)
212 1sui_A Caffeoyl-COA O-methyltr 97.5 6.6E-05 2.3E-09 68.9 4.6 102 50-211 79-190 (247)
213 3c3y_A Pfomt, O-methyltransfer 97.5 0.00012 4.1E-09 66.5 5.9 103 50-212 70-182 (237)
214 2yvl_A TRMI protein, hypotheti 97.5 0.00031 1.1E-08 63.1 8.3 98 50-212 91-191 (248)
215 3c3p_A Methyltransferase; NP_9 97.4 3.4E-05 1.2E-09 68.3 1.8 101 51-212 57-161 (210)
216 3lec_A NADB-rossmann superfami 97.4 0.00053 1.8E-08 62.6 9.7 127 49-280 20-149 (230)
217 3kr9_A SAM-dependent methyltra 97.4 0.001 3.6E-08 60.5 11.1 104 49-212 14-120 (225)
218 1sqg_A SUN protein, FMU protei 97.4 0.00037 1.3E-08 69.1 8.5 127 51-215 247-378 (429)
219 3a27_A TYW2, uncharacterized p 97.4 0.00063 2.2E-08 63.1 9.6 103 50-216 119-224 (272)
220 3lcv_B Sisomicin-gentamicin re 97.4 0.00043 1.5E-08 64.6 8.0 130 49-241 131-264 (281)
221 3frh_A 16S rRNA methylase; met 97.4 0.00028 9.6E-09 65.1 6.7 80 49-163 104-186 (253)
222 3ajd_A Putative methyltransfer 97.3 0.0002 7E-09 66.5 5.9 123 51-216 84-216 (274)
223 3gnl_A Uncharacterized protein 97.3 0.00061 2.1E-08 62.8 8.1 103 49-211 20-125 (244)
224 3b3j_A Histone-arginine methyl 97.3 0.0007 2.4E-08 68.3 9.1 104 51-211 159-263 (480)
225 2avd_A Catechol-O-methyltransf 97.3 0.00014 4.7E-09 64.9 3.4 103 50-212 69-180 (229)
226 3cbg_A O-methyltransferase; cy 97.3 0.00015 5.2E-09 65.5 3.7 104 51-214 73-185 (232)
227 1nv8_A HEMK protein; class I a 97.2 0.00066 2.3E-08 63.6 8.2 32 51-98 124-155 (284)
228 1ne2_A Hypothetical protein TA 97.2 0.0036 1.2E-07 54.5 12.3 75 50-160 51-125 (200)
229 2yxl_A PH0851 protein, 450AA l 97.2 0.0011 3.7E-08 66.2 9.7 125 51-215 260-393 (450)
230 2frx_A Hypothetical protein YE 97.2 0.00072 2.5E-08 68.2 8.3 126 51-215 118-250 (479)
231 2igt_A SAM dependent methyltra 97.2 0.00049 1.7E-08 66.0 6.7 116 51-216 154-277 (332)
232 3m6w_A RRNA methylase; rRNA me 97.1 0.0004 1.4E-08 69.8 5.3 119 51-214 102-232 (464)
233 2cmg_A Spermidine synthase; tr 97.1 0.0018 6.1E-08 60.1 9.2 100 49-211 71-171 (262)
234 1zq9_A Probable dimethyladenos 97.0 0.00037 1.3E-08 65.3 3.8 79 50-161 28-109 (285)
235 1wy7_A Hypothetical protein PH 97.0 0.017 5.7E-07 50.3 14.0 78 50-160 49-127 (207)
236 2f8l_A Hypothetical protein LM 97.0 0.0035 1.2E-07 60.0 10.2 125 50-213 130-258 (344)
237 3gru_A Dimethyladenosine trans 96.8 0.00062 2.1E-08 64.4 3.7 80 50-160 50-129 (295)
238 3k6r_A Putative transferase PH 96.8 0.0096 3.3E-07 55.8 11.8 102 51-216 126-230 (278)
239 1wxx_A TT1595, hypothetical pr 96.8 0.0019 6.4E-08 62.9 7.2 113 50-214 209-328 (382)
240 1yub_A Ermam, rRNA methyltrans 96.8 7.3E-05 2.5E-09 68.2 -2.9 20 50-69 29-48 (245)
241 3tm4_A TRNA (guanine N2-)-meth 96.7 0.0023 7.8E-08 62.2 6.9 97 18-154 196-295 (373)
242 2yx1_A Hypothetical protein MJ 96.7 0.005 1.7E-07 58.9 9.2 98 50-215 195-295 (336)
243 2ih2_A Modification methylase 96.7 0.0058 2E-07 59.5 9.5 120 51-213 40-166 (421)
244 4dmg_A Putative uncharacterize 96.6 0.0049 1.7E-07 60.5 8.8 111 51-214 215-329 (393)
245 2qm3_A Predicted methyltransfe 96.6 0.0059 2E-07 59.2 9.2 102 51-213 173-280 (373)
246 3m4x_A NOL1/NOP2/SUN family pr 96.6 0.0011 3.8E-08 66.5 3.5 124 51-215 106-238 (456)
247 4azs_A Methyltransferase WBDD; 96.5 0.0022 7.6E-08 65.8 5.7 80 49-160 65-149 (569)
248 4gqb_A Protein arginine N-meth 96.5 0.0043 1.5E-07 64.6 7.5 133 19-208 332-464 (637)
249 2b78_A Hypothetical protein SM 96.4 0.011 3.6E-07 57.8 9.5 113 51-213 213-333 (385)
250 1qam_A ERMC' methyltransferase 96.4 0.0024 8.3E-08 58.2 4.3 100 16-157 6-106 (244)
251 2as0_A Hypothetical protein PH 96.3 0.0059 2E-07 59.5 7.1 115 50-214 217-338 (396)
252 2h1r_A Dimethyladenosine trans 96.2 0.0044 1.5E-07 58.3 5.0 103 14-160 16-121 (299)
253 3fut_A Dimethyladenosine trans 96.0 0.0022 7.6E-08 59.8 2.0 108 7-157 14-122 (271)
254 3c0k_A UPF0064 protein YCCW; P 95.9 0.0086 2.9E-07 58.4 5.7 113 51-213 221-341 (396)
255 3khk_A Type I restriction-modi 95.9 0.065 2.2E-06 54.7 12.4 140 49-212 243-396 (544)
256 2okc_A Type I restriction enzy 95.8 0.022 7.5E-07 56.4 8.5 131 51-212 172-308 (445)
257 3v97_A Ribosomal RNA large sub 95.7 0.023 8E-07 59.8 8.7 116 51-214 540-660 (703)
258 2qy6_A UPF0209 protein YFCK; s 95.7 0.027 9.4E-07 51.9 8.1 23 50-72 60-82 (257)
259 3evf_A RNA-directed RNA polyme 95.6 0.029 9.8E-07 52.4 7.8 48 139-213 134-186 (277)
260 2jjq_A Uncharacterized RNA met 95.5 0.024 8.1E-07 56.1 7.2 32 50-98 290-321 (425)
261 3ua3_A Protein arginine N-meth 95.3 0.062 2.1E-06 56.4 9.9 110 19-151 387-501 (745)
262 2dul_A N(2),N(2)-dimethylguano 95.3 0.024 8.2E-07 55.2 6.3 33 51-98 48-80 (378)
263 3tqs_A Ribosomal RNA small sub 95.2 0.014 4.7E-07 53.9 4.1 20 50-69 29-48 (255)
264 1uwv_A 23S rRNA (uracil-5-)-me 95.0 0.17 5.9E-06 49.8 11.9 32 50-98 286-317 (433)
265 2qfm_A Spermine synthase; sper 94.7 0.051 1.7E-06 52.8 6.9 34 49-98 187-220 (364)
266 3lkd_A Type I restriction-modi 94.7 0.16 5.5E-06 51.8 11.0 131 50-213 221-360 (542)
267 3k0b_A Predicted N6-adenine-sp 94.3 0.48 1.7E-05 46.2 12.9 21 50-70 201-221 (393)
268 3axs_A Probable N(2),N(2)-dime 93.8 0.19 6.5E-06 49.2 8.8 65 12-98 22-86 (392)
269 1qyr_A KSGA, high level kasuga 93.7 0.059 2E-06 49.4 4.8 16 51-66 22-37 (252)
270 3ldu_A Putative methylase; str 93.4 0.43 1.5E-05 46.3 10.6 22 50-71 195-216 (385)
271 3ldg_A Putative uncharacterize 93.2 0.48 1.7E-05 46.0 10.6 20 51-70 195-214 (384)
272 2ar0_A M.ecoki, type I restric 93.1 0.14 4.7E-06 52.2 6.8 22 191-212 292-313 (541)
273 3uzu_A Ribosomal RNA small sub 93.1 0.022 7.4E-07 53.2 0.7 47 15-71 17-63 (279)
274 2b9e_A NOL1/NOP2/SUN domain fa 92.6 0.28 9.4E-06 46.3 7.7 34 51-98 103-136 (309)
275 3gcz_A Polyprotein; flavivirus 92.1 0.11 3.8E-06 48.5 4.1 19 51-69 91-109 (282)
276 3s1s_A Restriction endonucleas 92.0 1.3 4.5E-05 47.2 12.7 23 190-212 444-466 (878)
277 3ftd_A Dimethyladenosine trans 91.8 0.023 7.9E-07 52.0 -0.9 33 50-98 31-63 (249)
278 3r24_A NSP16, 2'-O-methyl tran 91.0 0.8 2.7E-05 43.3 8.6 103 49-212 108-218 (344)
279 3vyw_A MNMC2; tRNA wobble urid 90.9 1 3.4E-05 42.6 9.4 33 176-208 188-223 (308)
280 3eld_A Methyltransferase; flav 89.4 0.36 1.2E-05 45.4 5.0 21 49-69 80-100 (300)
281 1m6y_A S-adenosyl-methyltransf 89.3 0.28 9.6E-06 46.2 4.2 33 51-98 27-59 (301)
282 2k4m_A TR8_protein, UPF0146 pr 88.7 0.44 1.5E-05 40.4 4.5 33 50-98 35-68 (153)
283 4auk_A Ribosomal RNA large sub 87.8 1.4 4.6E-05 42.8 7.9 72 50-157 211-282 (375)
284 2wk1_A NOVP; transferase, O-me 85.5 8.8 0.0003 35.5 11.9 21 50-70 106-126 (282)
285 3o4f_A Spermidine synthase; am 85.4 4.8 0.00016 37.6 10.1 120 48-214 81-201 (294)
286 3v97_A Ribosomal RNA large sub 81.4 8.9 0.00031 40.1 11.3 20 51-70 191-210 (703)
287 3pvc_A TRNA 5-methylaminomethy 80.8 3.5 0.00012 42.7 7.9 23 50-72 58-80 (689)
288 2r6z_A UPF0341 protein in RSP 80.4 0.59 2E-05 42.8 1.7 19 51-69 84-102 (258)
289 2zig_A TTHA0409, putative modi 77.6 2.6 8.9E-05 38.9 5.2 22 191-212 77-98 (297)
290 3bt7_A TRNA (uracil-5-)-methyl 74.3 2.2 7.5E-05 40.8 3.8 19 51-69 214-232 (369)
291 2vz8_A Fatty acid synthase; tr 69.7 5.7 0.00019 47.6 6.6 109 51-212 1241-1349(2512)
292 3ll7_A Putative methyltransfer 67.6 2 6.9E-05 42.1 1.9 19 51-69 94-112 (410)
293 3ufb_A Type I restriction-modi 66.1 29 0.001 34.8 10.2 22 51-72 218-239 (530)
294 2oyr_A UPF0341 protein YHIQ; a 64.8 2.5 8.6E-05 38.7 1.8 18 52-69 90-107 (258)
295 3lkz_A Non-structural protein 57.3 5.5 0.00019 37.5 2.7 35 51-100 95-129 (321)
296 1boo_A Protein (N-4 cytosine-s 56.8 9.4 0.00032 35.7 4.3 25 189-213 62-86 (323)
297 3p8z_A Mtase, non-structural p 56.6 7.5 0.00026 35.5 3.4 35 51-100 79-113 (267)
298 2zig_A TTHA0409, putative modi 51.4 8.7 0.0003 35.3 3.1 19 51-69 236-254 (297)
299 1g60_A Adenine-specific methyl 48.3 15 0.00052 32.9 4.1 20 192-211 55-74 (260)
300 1eg2_A Modification methylase 43.9 21 0.00074 33.3 4.5 51 140-212 53-107 (319)
301 2uyo_A Hypothetical protein ML 41.8 2.1E+02 0.0072 26.3 15.9 76 188-275 195-274 (310)
302 4fzv_A Putative methyltransfer 40.9 54 0.0018 31.2 6.9 26 191-216 264-289 (359)
303 2px2_A Genome polyprotein [con 39.1 17 0.00059 33.4 2.9 20 50-69 73-92 (269)
304 1wg8_A Predicted S-adenosylmet 35.4 24 0.00083 32.7 3.3 20 51-70 23-42 (285)
305 3ps9_A TRNA 5-methylaminomethy 35.1 35 0.0012 34.9 4.9 23 50-72 66-88 (676)
306 3c6k_A Spermine synthase; sper 31.4 58 0.002 31.4 5.4 22 191-212 311-332 (381)
307 2lmc_A Bacterial RNA polymeras 28.5 37 0.0013 25.2 2.6 32 248-280 45-80 (84)
308 3qua_A Putative uncharacterize 26.5 46 0.0016 29.0 3.5 42 225-269 158-199 (199)
309 1i4w_A Mitochondrial replicati 25.4 34 0.0011 32.6 2.5 21 51-71 59-79 (353)
310 1rjd_A PPM1P, carboxy methyl t 23.8 4.3E+02 0.015 24.4 14.1 35 50-99 97-131 (334)
311 1zkd_A DUF185; NESG, RPR58, st 22.9 93 0.0032 30.0 5.1 24 48-71 78-101 (387)
312 1wg8_A Predicted S-adenosylmet 20.8 48 0.0016 30.7 2.5 28 187-214 209-236 (285)
313 1g60_A Adenine-specific methyl 20.1 64 0.0022 28.7 3.2 20 50-69 212-231 (260)
No 1
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=2.1e-92 Score=697.36 Aligned_cols=353 Identities=46% Similarity=0.827 Sum_probs=305.9
Q ss_pred CcccceeeccCCCCcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCC---cceEEeecCCCCcchHHHHHHHHHHHH
Q 036911 1 MEVQQVLCMNGGRGDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPE---CLKIADLGCSSGPNTLSLLWEIIDTID 77 (359)
Q Consensus 1 ~~~~~~l~M~gG~g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~---~~~IaDlGCs~G~nt~~l~~~ii~~i~ 77 (359)
|+++++|||+||+|++||++||. |++++..++|++++||++++....|+ +++|||||||+|+||+.+++.||++|+
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 89999999999999999999999 99999999999999999998754565 899999999999999999999999999
Q ss_pred HHhhh--ccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCCceeEEEecccc
Q 036911 78 GTCKR--LNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSL 155 (359)
Q Consensus 78 ~~~~~--~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~al 155 (359)
++|.+ .+.++|++||++||||+||||+||++||.+.+++.+..|...++||++|||||||+||||++|+|++||++||
T Consensus 80 ~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aL 159 (384)
T 2efj_A 80 KVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCL 159 (384)
T ss_dssp CC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCT
T ss_pred HHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEeccee
Confidence 99865 4556789999999999999999999999998887666666557899999999999999999999999999999
Q ss_pred cccccCCCCccccCCCCCCCcceeecCCCCc----------cccHHHHHHHHHHhhccCceEEEEEecCCCCCC--CCch
Q 036911 156 HWLSQVPEGLVSESGVPLNKGHICMAKTSPV----------GRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPG--DPRC 223 (359)
Q Consensus 156 hWls~~p~~~~~~~~~~~n~g~i~~~~~~~~----------~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~--~~~~ 223 (359)
||||++|..+.++.+++||||+||+++++|+ ++||..||++|++||||||+|+++++|+++ . +++
T Consensus 160 HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~--~~~~~~- 236 (384)
T 2efj_A 160 HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKED--EFDHPN- 236 (384)
T ss_dssp TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCT--TTCCCC-
T ss_pred eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCC--cccCcc-
Confidence 9999999999999999999999999999976 899999999999999999999999999998 5 554
Q ss_pred hHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCCC---CCCC---ccc--
Q 036911 224 TGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDANK---DDGS---KSL-- 295 (359)
Q Consensus 224 ~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~~---~~~~---~~~-- 295 (359)
..+.+.++|++||.+|+|+++++|+|++|+|+||++|++++|+++|+|+|+++|.++.+|++ + ++.. ...
T Consensus 237 -~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~-~~~~~~~~~~~~~~~~ 314 (384)
T 2efj_A 237 -SMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDA-GFSIDDDYQGRSHSPV 314 (384)
T ss_dssp -HHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTT-TCCC---------CCS
T ss_pred -cHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccc-cccccccccccccccc
Confidence 12389999999999999999999999999999999999999999999999999999999987 4 3210 000
Q ss_pred ccccccchhHHHHHHHHHhHHHHHhhcChhHHHHHHHHHHHHHHHHHhhCCCCEEEEEEEEeeC
Q 036911 296 TSGRHTRGKNIAKSIRAVSESMLASHFGEEIMDDLFERLAKKISEYLEFAPGHSTTMVISMTKS 359 (359)
Q Consensus 296 ~~d~~~~~~~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~~~~~~~~~~~~~~~~~~~~l~r~ 359 (359)
..|.+..|+.+++++||++||+|.+|||++++|+||+||++++++++..++++|++++++|+||
T Consensus 315 ~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 315 SCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKK 378 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEC
T ss_pred cchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEc
Confidence 0023578999999999999999999999999999999999999999999999999999999997
No 2
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=5.9e-92 Score=689.10 Aligned_cols=341 Identities=48% Similarity=0.831 Sum_probs=315.0
Q ss_pred CcccceeeccCCCCcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcC-CCCcceEEeecCCCCcchHHHHHHHHHHHHHH
Q 036911 1 MEVQQVLCMNGGRGDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNR-LPECLKIADLGCSSGPNTLSLLWEIIDTIDGT 79 (359)
Q Consensus 1 ~~~~~~l~M~gG~g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~-~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~ 79 (359)
|+++++|||+||+|++||++||.+|++++..++|++++||++++... .+++++|||||||+|+||+.+++.||++|+++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~ 80 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998754 57799999999999999999999999999999
Q ss_pred hhhccC-CCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCCceeEEEeccccccc
Q 036911 80 CKRLNR-EAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWL 158 (359)
Q Consensus 80 ~~~~~~-~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWl 158 (359)
|.+.++ ++|++||+|||||+||||+||++|+.+.. . . ++||++|||||||+||||++|+|++||++|||||
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~----~---~-~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWl 152 (359)
T 1m6e_X 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND----V---D-GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWL 152 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS----C---T-TCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBC
T ss_pred HHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc----c---C-CCEEEEecchhhhhccCCCCceEEEEehhhhhhc
Confidence 987776 67899999999999999999999997641 0 1 5799999999999999999999999999999999
Q ss_pred ccCCCCccccCCCCCCCcceeecCCCCc----------cccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCc----hh
Q 036911 159 SQVPEGLVSESGVPLNKGHICMAKTSPV----------GRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPR----CT 224 (359)
Q Consensus 159 s~~p~~~~~~~~~~~n~g~i~~~~~~~~----------~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~----~~ 224 (359)
|++|..+.+ |||+||+++++|+ ++||..||++|++||||||+|+++++|+++ .+++ +.
T Consensus 153 s~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~--~~~~~~~~~~ 224 (359)
T 1m6e_X 153 SQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRS--EDRASTECCL 224 (359)
T ss_dssp SSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSS--SSSSSTTTST
T ss_pred ccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCC--CCccccchHH
Confidence 999998887 9999999999875 899999999999999999999999999999 6664 46
Q ss_pred HHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCCCCCCCcccccccccchh
Q 036911 225 GWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDANKDDGSKSLTSGRHTRGK 304 (359)
Q Consensus 225 ~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 304 (359)
+|+.|.++|++||.+|+|++|++|+|++|+|+||++|++++|+++|+|+|+++|.++..|++ ++++ .....|.+..|+
T Consensus 225 ~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~-~~~~-~d~~~~~~~~g~ 302 (359)
T 1m6e_X 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSS-CTKD-GDGGGSVEEEGY 302 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTC-CSSC-TTCCSSTTTTTT
T ss_pred HHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCc-ccch-hhhhhhhhHhHh
Confidence 89999999999999999999999999999999999999999999999999999999999987 4332 111123467899
Q ss_pred HHHHHHHHHhHHHHHhhcChhHHHHHHHHHHHHHHHHHhhCCCCEEEEEEEEeeC
Q 036911 305 NIAKSIRAVSESMLASHFGEEIMDDLFERLAKKISEYLEFAPGHSTTMVISMTKS 359 (359)
Q Consensus 305 ~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~~~~~~~~~~~~~~~~~~~~l~r~ 359 (359)
.+++++||+++|+|.+|||++++|+||+||++++++++..++++|++++++|+||
T Consensus 303 ~~a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 303 NVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBC
T ss_pred HhhhhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999997
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=2.9e-89 Score=674.10 Aligned_cols=350 Identities=32% Similarity=0.574 Sum_probs=292.8
Q ss_pred CcccceeeccCCCCcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcC--CCCcceEEeecCCCCcchHHHHHHHHHHHHH
Q 036911 1 MEVQQVLCMNGGRGDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNR--LPECLKIADLGCSSGPNTLSLLWEIIDTIDG 78 (359)
Q Consensus 1 ~~~~~~l~M~gG~g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~--~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~ 78 (359)
|+++++|||+||+|++||++||.+|++++..++|++++||++++... .|++++|||||||+|+||+.+++.||++|++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~ 80 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISK 80 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999987654 3568999999999999999999999999999
Q ss_pred HhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCeEEecccCCcccCCCCCCceeEEEecccc
Q 036911 79 TCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSL 155 (359)
Q Consensus 79 ~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~al 155 (359)
+|...+.++|++||++||||+||||+||++|+.+.+++.. ..+...++||++|||||||+|+||++|+|++||++||
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aL 160 (374)
T 3b5i_A 81 RFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSL 160 (374)
T ss_dssp HHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCT
T ss_pred HHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEeccee
Confidence 9987777789999999999999999999999987543321 1222335799999999999999999999999999999
Q ss_pred cccccCCCCccccCCCCCCCcceeecCCCCc---------cccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCc----
Q 036911 156 HWLSQVPEGLVSESGVPLNKGHICMAKTSPV---------GRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPR---- 222 (359)
Q Consensus 156 hWls~~p~~~~~~~~~~~n~g~i~~~~~~~~---------~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~---- 222 (359)
||||++|..+.++.+++||||+||+++++|+ ++||..||++|++||||||+|+++++|+++ .+++
T Consensus 161 HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~--~~~~~~~~ 238 (374)
T 3b5i_A 161 HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTS--VDPTDQGG 238 (374)
T ss_dssp TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCC--SSTTCCHH
T ss_pred eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCC--Cccccccc
Confidence 9999999999999999999999999999987 889999999999999999999999999998 5554
Q ss_pred -hhHH-HHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCCCCCCCcccccccc
Q 036911 223 -CTGW-ELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDANKDDGSKSLTSGRH 300 (359)
Q Consensus 223 -~~~~-~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~~~~~~~~~~~d~~ 300 (359)
+.+| ++|.++|++|+.+|+++++++++|++|+|+||++|++++|+++|+|+|+++|.++.+|++ +.+... |.+
T Consensus 239 ~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~-~~~~~~----~~~ 313 (374)
T 3b5i_A 239 AGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPL-VVNEPD----DAS 313 (374)
T ss_dssp HHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCC-CCSSTT----CHH
T ss_pred hhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCc-cccccc----hhH
Confidence 4678 899999999999999999999999999999999999999998788999999999999987 332211 446
Q ss_pred cchhHHHHHHHHHhHHHHHhhcChhHHHHHHHHHHHHHHHHHh--hCCCC--EEEEEEEEe
Q 036911 301 TRGKNIAKSIRAVSESMLASHFGEEIMDDLFERLAKKISEYLE--FAPGH--STTMVISMT 357 (359)
Q Consensus 301 ~~~~~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~~~~~~~~--~~~~~--~~~~~~~l~ 357 (359)
..|+.+++++||+++|+|.+|||++++|+||+||++++++++. .++.+ +++++++|+
T Consensus 314 ~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 314 EVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence 7899999999999999999999999999999999999999987 67777 899999985
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=3e-16 Score=146.82 Aligned_cols=251 Identities=18% Similarity=0.163 Sum_probs=152.7
Q ss_pred eeccCCCCcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCC
Q 036911 7 LCMNGGRGDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNRE 86 (359)
Q Consensus 7 l~M~gG~g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~ 86 (359)
-.|........|++++..|......+...+. .....+|+|+|||+|..+..+.+
T Consensus 24 ~~~~~~w~a~~y~~~~~~~~~~~~~l~~~l~----------~~~~~~vLDiGcG~G~~~~~l~~---------------- 77 (279)
T 3ccf_A 24 GTAKNFWDATLYQDKHSFVWQYGEDLLQLLN----------PQPGEFILDLGCGTGQLTEKIAQ---------------- 77 (279)
T ss_dssp -----------------CCSSSCCHHHHHHC----------CCTTCEEEEETCTTSHHHHHHHH----------------
T ss_pred ccchhhcCHHHHhhcchHHHHHHHHHHHHhC----------CCCCCEEEEecCCCCHHHHHHHh----------------
Confidence 3455555667888877776655544333221 12357999999999999887762
Q ss_pred CCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCcc
Q 036911 87 APMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLV 166 (359)
Q Consensus 87 ~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~ 166 (359)
+..+++..|+.. ......+... .+..|.. +++....+ ++++|+|+|+.++||+.+.+
T Consensus 78 -~~~~v~gvD~s~-----------~~~~~a~~~~---~~~~~~~---~d~~~~~~-~~~fD~v~~~~~l~~~~d~~---- 134 (279)
T 3ccf_A 78 -SGAEVLGTDNAA-----------TMIEKARQNY---PHLHFDV---ADARNFRV-DKPLDAVFSNAMLHWVKEPE---- 134 (279)
T ss_dssp -TTCEEEEEESCH-----------HHHHHHHHHC---TTSCEEE---CCTTTCCC-SSCEEEEEEESCGGGCSCHH----
T ss_pred -CCCeEEEEECCH-----------HHHHHHHhhC---CCCEEEE---CChhhCCc-CCCcCEEEEcchhhhCcCHH----
Confidence 237888889742 1222222211 1223444 46655444 68999999999999976533
Q ss_pred ccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhh
Q 036911 167 SESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAK 246 (359)
Q Consensus 167 ~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~ 246 (359)
.+|+.-++.|+|||++++...+.++ . ....+.+...+.. .|..
T Consensus 135 -------------------------~~l~~~~~~LkpgG~l~~~~~~~~~--~---~~~~~~~~~~~~~---~~~~---- 177 (279)
T 3ccf_A 135 -------------------------AAIASIHQALKSGGRFVAEFGGKGN--I---KYILEALYNALET---LGIH---- 177 (279)
T ss_dssp -------------------------HHHHHHHHHEEEEEEEEEEEECTTT--T---HHHHHHHHHHHHH---HTCC----
T ss_pred -------------------------HHHHHHHHhcCCCcEEEEEecCCcc--h---HHHHHHHHHHHHh---cCCc----
Confidence 4788889999999999999987655 1 2233333333222 2321
Q ss_pred hccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCCCCCCCcccccccccchhHHHHHHHHHhHHHHHhhcChhH
Q 036911 247 VDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDANKDDGSKSLTSGRHTRGKNIAKSIRAVSESMLASHFGEEI 326 (359)
Q Consensus 247 ~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~Ra~~ep~l~~h~~~~i 326 (359)
...+..|+++++.+++.+++++.| |++..++.+..++.. .. ....+..|++++..+++. .++++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~--~~-----------~~~~~~~~l~~~~~~~~~-~~~~~~ 242 (279)
T 3ccf_A 178 NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTL--AE-----------GEFGMANWIQMFASAFLV-GLTPDQ 242 (279)
T ss_dssp CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEEC--SS-----------GGGHHHHHHHHHCHHHHT-TCCHHH
T ss_pred cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccc--cC-----------CHHHHHHHHHHhhHHHhc-cCCHHH
Confidence 223456788999999999999999 999998877655422 10 123677888888777774 588888
Q ss_pred HHHHHHHHHHHHHHHHhhC---CCCEEEEEEEEee
Q 036911 327 MDDLFERLAKKISEYLEFA---PGHSTTMVISMTK 358 (359)
Q Consensus 327 ~delf~r~~~~~~~~~~~~---~~~~~~~~~~l~r 358 (359)
.+++.+++.+.+.++.... ...|..+++.-+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~a~K 277 (279)
T 3ccf_A 243 QVQLIRKVEATLQDKLYHQESWTADYRRIRIVSIK 277 (279)
T ss_dssp HHHHHHHHHHHHHHHHEETTEEEECCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhhccCCCcEEEEEEEEEEEEec
Confidence 9999999988887765322 2244555666555
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=5.3e-16 Score=142.56 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=152.0
Q ss_pred cchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEe
Q 036911 15 DTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFL 94 (359)
Q Consensus 15 ~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~ 94 (359)
...|++.+..|...+..+...+ ......+|+|+|||+|..+..+.+.. |..+++.
T Consensus 8 ~~~y~~~~~~~~~~~~~l~~~~----------~~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~v~~ 62 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLLAQV----------PLERVLNGYDLGCGPGNSTELLTDRY---------------GVNVITG 62 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHHTTC----------CCSCCSSEEEETCTTTHHHHHHHHHH---------------CTTSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----------CCCCCCEEEEecCcCCHHHHHHHHhC---------------CCCEEEE
Confidence 5688888888877665432211 11346799999999999998877432 3478888
Q ss_pred cCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCC
Q 036911 95 NDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLN 174 (359)
Q Consensus 95 nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n 174 (359)
.|+.. ......+... .+..|+. +++.... +++++|+|+|+.++||+.+.+
T Consensus 63 ~D~s~-----------~~~~~a~~~~---~~~~~~~---~d~~~~~-~~~~fD~v~~~~~l~~~~~~~------------ 112 (259)
T 2p35_A 63 IDSDD-----------DMLEKAADRL---PNTNFGK---ADLATWK-PAQKADLLYANAVFQWVPDHL------------ 112 (259)
T ss_dssp EESCH-----------HHHHHHHHHS---TTSEEEE---CCTTTCC-CSSCEEEEEEESCGGGSTTHH------------
T ss_pred EECCH-----------HHHHHHHHhC---CCcEEEE---CChhhcC-ccCCcCEEEEeCchhhCCCHH------------
Confidence 89742 1222222211 1223443 5665555 789999999999999975422
Q ss_pred CcceeecCCCCccccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccC-CcC
Q 036911 175 KGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWF-NLP 253 (359)
Q Consensus 175 ~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f-~~P 253 (359)
.+|+...+-|+|||+++++.++... . . ....+.++...+.+... .... ..+
T Consensus 113 -----------------~~l~~~~~~L~pgG~l~~~~~~~~~--~----~----~~~~~~~~~~~~~~~~~-~~~~~~~~ 164 (259)
T 2p35_A 113 -----------------AVLSQLMDQLESGGVLAVQMPDNLQ--E----P----THIAMHETADGGPWKDA-FSGGGLRR 164 (259)
T ss_dssp -----------------HHHHHHGGGEEEEEEEEEEEECCTT--S----H----HHHHHHHHHHHSTTGGG-C-------
T ss_pred -----------------HHHHHHHHhcCCCeEEEEEeCCCCC--c----H----HHHHHHHHhcCcchHHH-hccccccc
Confidence 4888889999999999999976543 1 1 12233344333222221 1111 235
Q ss_pred ccCCCHHHHHHHHhcCCceEEeEEEEEe-ecCCCCCCCCCcccccccccchhHHHHHHHHHh-HHHHHhhcChhHHHHHH
Q 036911 254 YYAPSPEEVRHVIQTEGSFNIRRFDIHT-VDWDANKDDGSKSLTSGRHTRGKNIAKSIRAVS-ESMLASHFGEEIMDDLF 331 (359)
Q Consensus 254 ~y~~s~~E~~~~i~~~Gsf~i~~~e~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~Ra~~-ep~l~~h~~~~i~delf 331 (359)
..+++.+++.+++++.| |+|+..+... .++ . ....+..+++++. .+++ ..++++..+++.
T Consensus 165 ~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~----~------------~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~ 226 (259)
T 2p35_A 165 KPLPPPSDYFNALSPKS-SRVDVWHTVYNHPM----K------------DADSIVEWVKGTGLRPYL-AAAGEENREAFL 226 (259)
T ss_dssp CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEEE----S------------CHHHHHHHHTTTTTTHHH-HTTCGGGHHHHH
T ss_pred cCCCCHHHHHHHHHhcC-CceEEEEEEeeecc----C------------CchHHhhhhhcCcchHHH-HhCCHHHHHHHH
Confidence 67789999999999999 9876655432 221 1 1346777887664 3555 468888899999
Q ss_pred HHHHHHHHHHHhh--C---CCCEEEEEEEEee
Q 036911 332 ERLAKKISEYLEF--A---PGHSTTMVISMTK 358 (359)
Q Consensus 332 ~r~~~~~~~~~~~--~---~~~~~~~~~~l~r 358 (359)
+++.+.+++.+.. . ...+..+++.-+|
T Consensus 227 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~K 258 (259)
T 2p35_A 227 ADYTRRIAAAYPPMADGRLLLRFPRLFVVAVK 258 (259)
T ss_dssp HHHHHHHHHHSCCCTTSCEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCCCeEEEEeeeEEEEEec
Confidence 9998888876532 1 2234445555554
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.59 E-value=7.8e-14 Score=128.09 Aligned_cols=219 Identities=16% Similarity=0.216 Sum_probs=137.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh-CCCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK-GSNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~-~~~~~~~f 128 (359)
...+|+|+|||+|..+..++ +. ..+++..|+.. ......++.. +...+-.|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 90 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLI--------AR---------GYRYIALDADA-----------AMLEVFRQKIAGVDRKVQV 90 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHH--------TT---------TCEEEEEESCH-----------HHHHHHHHHTTTSCTTEEE
T ss_pred CCCEEEEeCCcCCHHHHHHH--------HC---------CCEEEEEECCH-----------HHHHHHHHHhhccCCceEE
Confidence 46799999999999998776 11 26788888742 1212222221 11112223
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+ .+++....++++++|+|+++.++||+.+.+ .+|+.-.+-|+|||+++
T Consensus 91 ~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~L~pgG~l~ 138 (263)
T 2yqz_A 91 V---QADARAIPLPDESVHGVIVVHLWHLVPDWP-----------------------------KVLAEAIRVLKPGGALL 138 (263)
T ss_dssp E---ESCTTSCCSCTTCEEEEEEESCGGGCTTHH-----------------------------HHHHHHHHHEEEEEEEE
T ss_pred E---EcccccCCCCCCCeeEEEECCchhhcCCHH-----------------------------HHHHHHHHHCCCCcEEE
Confidence 3 367777778899999999999999976532 37888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHH-hccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCC
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVL-EGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDAN 287 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~ 287 (359)
+.+...+. ...+ .+...+.++.. .|. . ...+..+++.+++.+++++.| |++...+... |..
T Consensus 139 ~~~~~~~~------~~~~-~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~--~~~- 200 (263)
T 2yqz_A 139 EGWDQAEA------SPEW-TLQERWRAFAAEEGF-P------VERGLHAKRLKEVEEALRRLG-LKPRTREVAR--WRE- 200 (263)
T ss_dssp EEEEEECC------CHHH-HHHHHHHHHHHHHTC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEEEE--EEE-
T ss_pred EEecCCCc------cHHH-HHHHHHHHHHHHhCC-C------cccccccCCHHHHHHHHHHcC-CCcceEEEee--eec-
Confidence 99443321 1111 12223333322 121 0 112345678999999999999 9987766543 321
Q ss_pred CCCCCcccccccccchhHHHHHHHHHhHHHHHhhcChhHHHHHHHHHHHHHHHHHhhCCC---CEEEEEEEEeeC
Q 036911 288 KDDGSKSLTSGRHTRGKNIAKSIRAVSESMLASHFGEEIMDDLFERLAKKISEYLEFAPG---HSTTMVISMTKS 359 (359)
Q Consensus 288 ~~~~~~~~~~d~~~~~~~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~~~~~~~~~~~~---~~~~~~~~l~r~ 359 (359)
. ...+.+..++++.+.+.+ .+++++..+++.+++.+.+.+....... -+..+++++-||
T Consensus 201 -~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~rk 262 (263)
T 2yqz_A 201 -E-----------RTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRVSRL 262 (263)
T ss_dssp -E-----------ECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEEEEC
T ss_pred -C-----------CCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEeeec
Confidence 0 123456677776655655 5688888999999999988876543222 233455555554
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.44 E-value=4.3e-12 Score=117.51 Aligned_cols=193 Identities=12% Similarity=0.054 Sum_probs=118.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++ .+ ..+++..|+.. ......+. ..+...+.
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~--------~~--------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~ 113 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLAT--------AR--------DVRVTGISISR-----------PQVNQANARATAAGLANRV 113 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHH--------HS--------CCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------hc--------CCEEEEEeCCH-----------HHHHHHHHHHHhcCCCcce
Confidence 457999999999999887762 21 26888888742 11111111 11211112
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.| +.+++....+|++++|+|+|+.++||+.+.+ .+|+..++-|+|||+
T Consensus 114 ~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~L~pgG~ 161 (273)
T 3bus_A 114 TF---SYADAMDLPFEDASFDAVWALESLHHMPDRG-----------------------------RALREMARVLRPGGT 161 (273)
T ss_dssp EE---EECCTTSCCSCTTCEEEEEEESCTTTSSCHH-----------------------------HHHHHHHTTEEEEEE
T ss_pred EE---EECccccCCCCCCCccEEEEechhhhCCCHH-----------------------------HHHHHHHHHcCCCeE
Confidence 23 3468877778899999999999999975532 488888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCC
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDA 286 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~ 286 (359)
+++..+...+ ... . . ....+..+.. .+. ..+.++.+++.+++++.| |++..++.+...+..
T Consensus 162 l~i~~~~~~~--~~~-~-~---~~~~~~~~~~----------~~~-~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~ 222 (273)
T 3bus_A 162 VAIADFVLLA--PVE-G-A---KKEAVDAFRA----------GGG-VLSLGGIDEYESDVRQAE-LVVTSTVDISAQARP 222 (273)
T ss_dssp EEEEEEEESS--CCC-H-H---HHHHHHHHHH----------HHT-CCCCCCHHHHHHHHHHTT-CEEEEEEECHHHHTT
T ss_pred EEEEEeeccC--CCC-h-h---HHHHHHHHHh----------hcC-ccCCCCHHHHHHHHHHcC-CeEEEEEECcHhHHH
Confidence 9999987654 111 0 1 1111111110 111 235789999999999999 999887765433211
Q ss_pred CCCCCCcccccccccchhHHHHHHHHHhHHHHHhhcChhHHHHHHHHHHH
Q 036911 287 NKDDGSKSLTSGRHTRGKNIAKSIRAVSESMLASHFGEEIMDDLFERLAK 336 (359)
Q Consensus 287 ~~~~~~~~~~~d~~~~~~~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~ 336 (359)
.+. .+...+++.... +...+|++..+.+.+.+..
T Consensus 223 --------------~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 223 --------------SLV-KTAEAFENARSQ-VEPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp --------------HHH-HHHHHHHHTHHH-HHHHHCHHHHHHHHHHHHH
T ss_pred --------------HHH-HHHHHHHHhHHH-HHhhcCHHHHHHHHHHHHH
Confidence 111 222222332333 3356787777777666655
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.44 E-value=8.7e-12 Score=112.81 Aligned_cols=170 Identities=16% Similarity=0.085 Sum_probs=113.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+.+.. |..+++..|+.. ......++......+-.|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~ 96 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY---------------PEATFTLVDMSE-----------KMLEIAKNRFRGNLKVKY 96 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC---------------TTCEEEEEESCH-----------HHHHHHHHHTCSCTTEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC---------------CCCeEEEEECCH-----------HHHHHHHHhhccCCCEEE
Confidence 346899999999999988877322 458899999742 222222222211111223
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+.+++....++ +++|+|+++.++||+++. +...+|+.-++-|+|||+++
T Consensus 97 ---~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~---------------------------~~~~~l~~~~~~LkpgG~l~ 145 (234)
T 3dtn_A 97 ---IEADYSKYDFE-EKYDMVVSALSIHHLEDE---------------------------DKKELYKRSYSILKESGIFI 145 (234)
T ss_dssp ---EESCTTTCCCC-SCEEEEEEESCGGGSCHH---------------------------HHHHHHHHHHHHEEEEEEEE
T ss_pred ---EeCchhccCCC-CCceEEEEeCccccCCHH---------------------------HHHHHHHHHHHhcCCCcEEE
Confidence 34677666666 999999999999997441 12348888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccC---CcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWF---NLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f---~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++....++ . ..........|.....++-.+.+++..+ .--.+.++.+|+.+++++.| |++.++....
T Consensus 146 ~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~~~~~ 215 (234)
T 3dtn_A 146 NADLVHGE--T---AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSCIYKY 215 (234)
T ss_dssp EEEECBCS--S---HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred EEEecCCC--C---hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceeeeeee
Confidence 99887766 2 3334455566666655444555544321 12235579999999999999 9988776544
No 9
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.41 E-value=1.7e-11 Score=115.84 Aligned_cols=217 Identities=12% Similarity=0.078 Sum_probs=134.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. + .+|+..|+.. ......++ ..+...+-
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~---------------~-~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~v 124 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY---------------D-VNVIGLTLSE-----------NQYAHDKAMFDEVDSPRRK 124 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEECCH-----------HHHHHHHHHHHHSCCSSCE
T ss_pred CcCEEEEeeccCcHHHHHHHHhC---------------C-CEEEEEECCH-----------HHHHHHHHHHHhcCCCCce
Confidence 35799999999999998887432 3 6788889742 11111211 11221112
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.++. +++... ++++|+|+|+.++|++.+... .. ..+++..+|+.-.+-|+|||+
T Consensus 125 ~~~~---~d~~~~---~~~fD~v~~~~~~~~~~d~~~-~~-------------------~~~~~~~~l~~~~~~LkpgG~ 178 (302)
T 3hem_A 125 EVRI---QGWEEF---DEPVDRIVSLGAFEHFADGAG-DA-------------------GFERYDTFFKKFYNLTPDDGR 178 (302)
T ss_dssp EEEE---CCGGGC---CCCCSEEEEESCGGGTTCCSS-CC-------------------CTTHHHHHHHHHHHSSCTTCE
T ss_pred EEEE---CCHHHc---CCCccEEEEcchHHhcCcccc-cc-------------------chhHHHHHHHHHHHhcCCCcE
Confidence 2333 566432 799999999999999876321 00 135677899999999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHH-------HHHHHHHHHhccchhhhhccCCcCc-cCCCHHHHHHHHhcCCceEEeEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELL-------GVTLNDMVLEGLVEEAKVDWFNLPY-YAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l-------~~al~~mv~eGli~~e~~d~f~~P~-y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
+++..+...+ . ...... ...+.+. +.....|. +.|+.+++.+.+++.| |++..++
T Consensus 179 l~i~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~~ 241 (302)
T 3hem_A 179 MLLHTITIPD--K----EEAQELGLTSPMSLLRFIKF----------ILTEIFPGGRLPRISQVDYYSSNAG-WKVERYH 241 (302)
T ss_dssp EEEEEEECCC--H----HHHHHHTCCCCHHHHHHHHH----------HHHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred EEEEEEeccC--c----cchhhccccccccccchHHH----------HHHhcCCCCCCCCHHHHHHHHHhCC-cEEEEEE
Confidence 9999998776 1 000000 0000111 11123343 7799999999999999 9998886
Q ss_pred EEeecCCCCCCCCCcccccccccchhHHHHHHHHHhH--HHHHhhcChhHHHHHHHHHHHHHHHHHhhCCCCEEEEEEE
Q 036911 279 IHTVDWDANKDDGSKSLTSGRHTRGKNIAKSIRAVSE--SMLASHFGEEIMDDLFERLAKKISEYLEFAPGHSTTMVIS 355 (359)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~Ra~~e--p~l~~h~~~~i~delf~r~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
.+.. .+++.+..|.+.+-. +-+.+.++++..+ .|+.|-.-.+..+........+++++
T Consensus 242 ~~~~------------------~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~f~~~~~~~~q~~~~ 301 (302)
T 3hem_A 242 RIGA------------------NYVPTLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDLFRDKYTDVCQFTLV 301 (302)
T ss_dssp ECGG------------------GHHHHHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred eCch------------------hHHHHHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHHHhCCCCeEEEEEEE
Confidence 5432 234444445444332 2333456666554 57777666666777777887776653
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.39 E-value=1.2e-11 Score=113.37 Aligned_cols=208 Identities=19% Similarity=0.141 Sum_probs=128.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. + .+++..|+.. ......+. ..+...+-
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~---------------~-~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 98 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYV---------------K-GQITGIDLFP-----------DFIEIFNENAVKANCADRV 98 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHC---------------C-SEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhC---------------C-CeEEEEECCH-----------HHHHHHHHHHHHcCCCCce
Confidence 35699999999999998887321 3 3888888742 11111111 12221112
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+ .+++....++++++|+|+|+.++||+ +.+ .+|+.-.+-|+|||+
T Consensus 99 ~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~-----------------------------~~l~~~~~~L~pgG~ 145 (257)
T 3f4k_A 99 KGI---TGSMDNLPFQNEELDLIWSEGAIYNI-GFE-----------------------------RGMNEWSKYLKKGGF 145 (257)
T ss_dssp EEE---ECCTTSCSSCTTCEEEEEEESCSCCC-CHH-----------------------------HHHHHHHTTEEEEEE
T ss_pred EEE---ECChhhCCCCCCCEEEEEecChHhhc-CHH-----------------------------HHHHHHHHHcCCCcE
Confidence 333 36776777889999999999999997 211 378888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe-ecCC
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT-VDWD 285 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~-~~~~ 285 (359)
++++.+.... ..+.. .+...|.. . .| ..++.+++.+.+++.| |++.....+. ..|.
T Consensus 146 l~~~~~~~~~--~~~~~----~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~ 202 (257)
T 3f4k_A 146 IAVSEASWFT--SERPA----EIEDFWMD----A-----------YP-EISVIPTCIDKMERAG-YTPTAHFILPENCWT 202 (257)
T ss_dssp EEEEEEEESS--SCCCH----HHHHHHHH----H-----------CT-TCCBHHHHHHHHHHTT-EEEEEEEECCGGGTC
T ss_pred EEEEEeeccC--CCChH----HHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CeEEEEEECChhhHH
Confidence 9999876443 11111 11112221 0 12 2578999999999999 9988865543 2353
Q ss_pred CCCCCCCcccccccccchhHHHHHHHHHhHHHHHhhcChhHHHHHHHHHHHHHHHHHhhCCCCEEEEEEEEeeC
Q 036911 286 ANKDDGSKSLTSGRHTRGKNIAKSIRAVSESMLASHFGEEIMDDLFERLAKKISEYLEFAPGHSTTMVISMTKS 359 (359)
Q Consensus 286 ~~~~~~~~~~~~d~~~~~~~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~~~~~~~~~~~~~~~~~~~~l~r~ 359 (359)
. . +- ..++...+.+...+-++...+++.++..+....+ ......+--.+++++|+
T Consensus 203 ~---~-----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 203 E---H-----------YF----APQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKYKDYYGYVFYIGQKR 257 (257)
T ss_dssp C---C-----------CC----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEEC
T ss_pred H---H-----------HH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHhCCccceEEEEEecC
Confidence 2 1 11 1222233333444456566777777776655543 33355666677888775
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.36 E-value=1.7e-12 Score=119.69 Aligned_cols=154 Identities=13% Similarity=0.186 Sum_probs=100.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+. +. . .+++..|+.. ......++. .+.. +-
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~--------~~--------~-~~v~gvD~s~-----------~~l~~a~~~~~~~~~~-~v 87 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA--------PF--------V-KKVVAFDLTE-----------DILKVARAFIEGNGHQ-QV 87 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------GG--------S-SEEEEEESCH-----------HHHHHHHHHHHHTTCC-SE
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hh--------C-CEEEEEeCCH-----------HHHHHHHHHHHhcCCC-ce
Confidence 46799999999999888775 22 1 3788888742 111111111 1211 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.| +.+++....+|++++|+|+|+.++||+.+.+ .+|+.-.+-|+|||+
T Consensus 88 ~~---~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~-----------------------------~~l~~~~r~LkpgG~ 135 (260)
T 1vl5_A 88 EY---VQGDAEQMPFTDERFHIVTCRIAAHHFPNPA-----------------------------SFVSEAYRVLKKGGQ 135 (260)
T ss_dssp EE---EECCC-CCCSCTTCEEEEEEESCGGGCSCHH-----------------------------HHHHHHHHHEEEEEE
T ss_pred EE---EEecHHhCCCCCCCEEEEEEhhhhHhcCCHH-----------------------------HHHHHHHHHcCCCCE
Confidence 23 3467877788999999999999999986533 378888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
++++.....+ . .....+...+..+. + .....+.+.+++.+++++.| |++..++.+..+
T Consensus 136 l~~~~~~~~~--~----~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~ 193 (260)
T 1vl5_A 136 LLLVDNSAPE--N----DAFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FELEELHCFHKT 193 (260)
T ss_dssp EEEEEEEBCS--S----HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEEEEEEEEEEE
T ss_pred EEEEEcCCCC--C----HHHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeEEEEEEeecc
Confidence 9998776554 1 11221111111110 1 11234578999999999999 999888876543
No 12
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.34 E-value=1.8e-11 Score=114.92 Aligned_cols=151 Identities=15% Similarity=0.058 Sum_probs=100.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. . .+++..|+.. ......++ ..+...+-
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~---------------~-~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~ 134 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF---------------G-VSIDCLNIAP-----------VQNKRNEEYNNQAGLADNI 134 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEESCH-----------HHHHHHHHHHHHHTCTTTE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh---------------C-CEEEEEeCCH-----------HHHHHHHHHHHhcCCCcce
Confidence 46799999999999998876332 1 5788888742 11111111 12221122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.| +.+++....+|++++|+|++..++|++.+.+ .+|+.-++-|+|||+
T Consensus 135 ~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~LkpgG~ 182 (297)
T 2o57_A 135 TV---KYGSFLEIPCEDNSYDFIWSQDAFLHSPDKL-----------------------------KVFQECARVLKPRGV 182 (297)
T ss_dssp EE---EECCTTSCSSCTTCEEEEEEESCGGGCSCHH-----------------------------HHHHHHHHHEEEEEE
T ss_pred EE---EEcCcccCCCCCCCEeEEEecchhhhcCCHH-----------------------------HHHHHHHHHcCCCeE
Confidence 33 3468888788999999999999999976522 488888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++++.+...+ ..+. ..+ ...+.. +..| .+++.+++.+++++.| |++.+++.+.
T Consensus 183 l~~~~~~~~~--~~~~-~~~---~~~~~~--------------~~~~-~~~~~~~~~~~l~~aG-f~~~~~~~~~ 235 (297)
T 2o57_A 183 MAITDPMKED--GIDK-SSI---QPILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRTFSRP 235 (297)
T ss_dssp EEEEEEEECT--TCCG-GGG---HHHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEEEECH
T ss_pred EEEEEeccCC--CCch-HHH---HHHHHH--------------hcCC-CCCCHHHHHHHHHHCC-CeEEEEEECc
Confidence 9999887655 2111 111 111111 1122 3579999999999999 9988776543
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.34 E-value=4.2e-11 Score=110.81 Aligned_cols=150 Identities=21% Similarity=0.169 Sum_probs=100.0
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+...+|+|+|||+|..+..++ + .+..+++..|+.. ......++ ..+...+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~--------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~ 97 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA--------G--------HVTGQVTGLDFLS-----------GFIDIFNRNARQSGLQNR 97 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------T--------TCSSEEEEEESCH-----------HHHHHHHHHHHHTTCTTT
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------h--------ccCCEEEEEeCCH-----------HHHHHHHHHHHHcCCCcC
Confidence 346899999999999988776 2 1446899999742 11111211 1222112
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.|+ .+++.+..++++++|+|+|+.++|++ +.+ .+|+.-.+-|+|||
T Consensus 98 v~~~---~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~-----------------------------~~l~~~~~~LkpgG 144 (267)
T 3kkz_A 98 VTGI---VGSMDDLPFRNEELDLIWSEGAIYNI-GFE-----------------------------RGLNEWRKYLKKGG 144 (267)
T ss_dssp EEEE---ECCTTSCCCCTTCEEEEEESSCGGGT-CHH-----------------------------HHHHHHGGGEEEEE
T ss_pred cEEE---EcChhhCCCCCCCEEEEEEcCCceec-CHH-----------------------------HHHHHHHHHcCCCC
Confidence 2333 36776767789999999999999997 322 37888899999999
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+++++.+.... ..+.. .+...|.+ . .| .+++.+++.+.+++.| |++..++.+.
T Consensus 145 ~l~~~~~~~~~--~~~~~----~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~ 197 (267)
T 3kkz_A 145 YLAVSECSWFT--DERPA----EINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVATFILP 197 (267)
T ss_dssp EEEEEEEEESS--SCCCH----HHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEEEECC
T ss_pred EEEEEEeeecC--CCChH----HHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEEEECC
Confidence 99999886543 21111 11122211 1 12 4679999999999999 9998776653
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.31 E-value=1.6e-10 Score=105.91 Aligned_cols=193 Identities=14% Similarity=0.107 Sum_probs=119.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++.. ..+++..|+.. ......++......+-.|+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 107 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY----------------GAHTHGIDICS-----------NIVNMANERVSGNNKIIFE 107 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------CCEEEEEESCH-----------HHHHHHHHTCCSCTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHc----------------CCEEEEEeCCH-----------HHHHHHHHHhhcCCCeEEE
Confidence 45799999999999998887332 26788888742 1212222211111122233
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++....+|++++|+|+|+.++|+++. .|...+|+.-.+-|+|||++++
T Consensus 108 ---~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 108 ---ANDILTKEFPENNFDLIYSRDAILALSL---------------------------ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp ---ECCTTTCCCCTTCEEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---ECccccCCCCCCcEEEEeHHHHHHhcCh---------------------------HHHHHHHHHHHHHcCCCCEEEE
Confidence 3677777888999999999999999732 2344689999999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCCCC
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDANKD 289 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~~~ 289 (359)
..+.... ..+.. ..+...... ....+++.+++.+.+++.| |++...+.+...
T Consensus 158 ~~~~~~~--~~~~~-------~~~~~~~~~------------~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~------ 209 (266)
T 3ujc_A 158 TDYCATE--KENWD-------DEFKEYVKQ------------RKYTLITVEEYADILTACN-FKNVVSKDLSDY------ 209 (266)
T ss_dssp EEEEESC--GGGCC-------HHHHHHHHH------------HTCCCCCHHHHHHHHHHTT-CEEEEEEECHHH------
T ss_pred EEeccCC--cccch-------HHHHHHHhc------------CCCCCCCHHHHHHHHHHcC-CeEEEEEeCCHH------
Confidence 9987655 11111 111111111 1234679999999999999 998877654322
Q ss_pred CCCcccccccccchhHHHHHHHHHhH--HHHHhhcChhHHHHHHHHHHHHHH
Q 036911 290 DGSKSLTSGRHTRGKNIAKSIRAVSE--SMLASHFGEEIMDDLFERLAKKIS 339 (359)
Q Consensus 290 ~~~~~~~~d~~~~~~~~~~~~Ra~~e--p~l~~h~~~~i~delf~r~~~~~~ 339 (359)
+...+..|.+.+.. .-+.+.++++..+.+.+.....+.
T Consensus 210 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (266)
T 3ujc_A 210 ------------WNQLLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKIK 249 (266)
T ss_dssp ------------HHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 22233333333321 222344677666666655555544
No 15
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.30 E-value=2.6e-11 Score=113.20 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=74.5
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..|..+. ++ -.+|+..|+.. .. +.... ...+-.|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~--------~~---------~~~v~gvD~s~-----------~m---l~~a~-~~~~v~~ 85 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLA--------EF---------FERVHAVDPGE-----------AQ---IRQAL-RHPRVTY 85 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHH--------TT---------CSEEEEEESCH-----------HH---HHTCC-CCTTEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEeCcH-----------Hh---hhhhh-hcCCcee
Confidence 345799999999999998876 22 15788888642 11 11111 1112233
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
.. +++....+|++|+|+|+|+.++||+.. + .||+.-++-|||||+|+
T Consensus 86 ~~---~~~e~~~~~~~sfD~v~~~~~~h~~~~-~-----------------------------~~~~e~~rvLkpgG~l~ 132 (257)
T 4hg2_A 86 AV---APAEDTGLPPASVDVAIAAQAMHWFDL-D-----------------------------RFWAELRRVARPGAVFA 132 (257)
T ss_dssp EE---CCTTCCCCCSSCEEEEEECSCCTTCCH-H-----------------------------HHHHHHHHHEEEEEEEE
T ss_pred eh---hhhhhhcccCCcccEEEEeeehhHhhH-H-----------------------------HHHHHHHHHcCCCCEEE
Confidence 33 678888899999999999999999742 2 37888899999999999
Q ss_pred EEEecCCC
Q 036911 209 LSIIGNDR 216 (359)
Q Consensus 209 ~~~~g~~~ 216 (359)
+...+...
T Consensus 133 ~~~~~~~~ 140 (257)
T 4hg2_A 133 AVTYGLTR 140 (257)
T ss_dssp EEEECCCB
T ss_pred EEECCCCC
Confidence 99988766
No 16
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.30 E-value=2e-11 Score=111.46 Aligned_cols=155 Identities=16% Similarity=0.180 Sum_probs=100.2
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
....+|+|+|||+|..+..+. +. -.+++..|+.. ......+. ..+.. +
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~ 70 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFS--------PY---------VQECIGVDATK-----------EMVEVASSFAQEKGVE-N 70 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHG--------GG---------SSEEEEEESCH-----------HHHHHHHHHHHHHTCC-S
T ss_pred CCCCEEEEEccCcCHHHHHHH--------Hh---------CCEEEEEECCH-----------HHHHHHHHHHHHcCCC-C
Confidence 346899999999999888775 22 13788888742 11111111 11211 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.|+ .+++....++++++|+|+++.++||+.+.+ .+|+.-++-|+|||
T Consensus 71 v~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~LkpgG 118 (239)
T 1xxl_A 71 VRFQ---QGTAESLPFPDDSFDIITCRYAAHHFSDVR-----------------------------KAVREVARVLKQDG 118 (239)
T ss_dssp EEEE---ECBTTBCCSCTTCEEEEEEESCGGGCSCHH-----------------------------HHHHHHHHHEEEEE
T ss_pred eEEE---ecccccCCCCCCcEEEEEECCchhhccCHH-----------------------------HHHHHHHHHcCCCc
Confidence 2233 357777778889999999999999976532 47888899999999
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
++++......+ . .....+.+.+..+ .+ .....+.+.+++.+++++.| |++..++....+
T Consensus 119 ~l~~~~~~~~~--~----~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~ll~~aG-f~~~~~~~~~~~ 177 (239)
T 1xxl_A 119 RFLLVDHYAPE--D----PVLDEFVNHLNRL----------RD--PSHVRESSLSEWQAMFSANQ-LAYQDIQKWNLP 177 (239)
T ss_dssp EEEEEEECBCS--S----HHHHHHHHHHHHH----------HC--TTCCCCCBHHHHHHHHHHTT-EEEEEEEEEEEE
T ss_pred EEEEEEcCCCC--C----hhHHHHHHHHHHh----------cc--ccccCCCCHHHHHHHHHHCC-CcEEEEEeecCc
Confidence 99998776654 1 1111111111111 01 11234568999999999999 999888876544
No 17
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.30 E-value=1.6e-11 Score=114.82 Aligned_cols=165 Identities=18% Similarity=0.231 Sum_probs=103.8
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~ 125 (359)
+...+|+|+|||+|..+..+. +. ..+++..|+.. ......+.. .+...+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~ 118 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMA--------ER---------GHQVILCDLSA-----------QMIDRAKQAAEAKGVSDN 118 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHHC-CCGGG
T ss_pred CCCCEEEEeCCcchHHHHHHH--------HC---------CCEEEEEECCH-----------HHHHHHHHHHHhcCCCcc
Confidence 346899999999999888776 21 26788888742 111212211 111111
Q ss_pred CeEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 126 PCFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 126 ~~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
-.|+. +++.... ++++++|+|+++.++||+.+.+ .+|+.-++-|+||
T Consensus 119 v~~~~---~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~Lkpg 166 (285)
T 4htf_A 119 MQFIH---CAAQDVASHLETPVDLILFHAVLEWVADPR-----------------------------SVLQTLWSVLRPG 166 (285)
T ss_dssp EEEEE---SCGGGTGGGCSSCEEEEEEESCGGGCSCHH-----------------------------HHHHHHHHTEEEE
T ss_pred eEEEE---cCHHHhhhhcCCCceEEEECchhhcccCHH-----------------------------HHHHHHHHHcCCC
Confidence 22333 5666665 7889999999999999975532 4888889999999
Q ss_pred ceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 205 GHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 205 G~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
|++++....... ......+...|.. ...+..... .....+.++.+++++++++++.| |++...+.+...
T Consensus 167 G~l~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~~~~~~~ 235 (285)
T 4htf_A 167 GVLSLMFYNAHG------LLMHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGKTGVRVF 235 (285)
T ss_dssp EEEEEEEEBHHH------HHHHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEEEEESSS
T ss_pred eEEEEEEeCCch------HHHHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-CceeeeeeEEEe
Confidence 999999886644 1111111111111 112211111 11124557789999999999999 999998887644
No 18
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.29 E-value=2e-11 Score=115.04 Aligned_cols=158 Identities=15% Similarity=0.198 Sum_probs=95.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcc--eEEecCCCCCchhhhhhcccchHHHHHHhh-C-CCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMY--QVFLNDLPGNDFNTIFKSLPGFYEKLKEVK-G-SNFG 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~--~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~-~-~~~~ 125 (359)
...+|||+|||+|..|..+++.+ ..++ |.. .++..|... ...+..++.. . ....
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l----~~~~-------~~~~v~~~~vD~S~-----------~ml~~a~~~~~~~~~~~ 109 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKV----QAQY-------PGVCINNEVVEPSA-----------EQIAKYKELVAKTSNLE 109 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHH----HHHS-------TTCEEEEEEECSCH-----------HHHHHHHHHHHTCSSCT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHH----HhhC-------CCceeeEEEEeCCH-----------HHHHHHHHHHHhccCCC
Confidence 46799999999998777666443 2221 334 448888642 2222222211 1 0112
Q ss_pred CeEEecccCCcccC------CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 126 PCFIAGIPGSFYGR------LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 126 ~~f~~~v~gsFy~~------lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
++-+.-..++.... .|+++++|+|+++.+|||+.+.+ .+|+.-++
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~-----------------------------~~l~~~~r 160 (292)
T 2aot_A 110 NVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIP-----------------------------ATLKFFHS 160 (292)
T ss_dssp TEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHH-----------------------------HHHHHHHH
T ss_pred cceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHH-----------------------------HHHHHHHH
Confidence 22221122333222 26789999999999999977644 37888899
Q ss_pred hhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEE
Q 036911 200 EILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 200 EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
-|||||++++.....+. .|. ..+..... .+ .. .....+++++++.+++++.| |++...+
T Consensus 161 ~LkpgG~l~i~~~~~~~--------~~~---~~~~~~~~-~~-~~------~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 219 (292)
T 2aot_A 161 LLGTNAKMLIIVVSGSS--------GWD---KLWKKYGS-RF-PQ------DDLCQYITSDDLTQMLDNLG-LKYECYD 219 (292)
T ss_dssp TEEEEEEEEEEEECTTS--------HHH---HHHHHHGG-GS-CC------CTTCCCCCHHHHHHHHHHHT-CCEEEEE
T ss_pred HcCCCcEEEEEEecCCc--------cHH---HHHHHHHH-hc-cC------CCcccCCCHHHHHHHHHHCC-CceEEEE
Confidence 99999999999766533 122 22222111 10 00 01235689999999999999 9887643
No 19
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.29 E-value=2.9e-11 Score=113.04 Aligned_cols=163 Identities=20% Similarity=0.213 Sum_probs=100.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..|+.+++.+ ..|..+|+..|+.. ...+..++. .+...+-
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~-------------~~~~~~v~gvD~s~-----------~ml~~A~~~~~~~~~~~~v 125 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNI-------------HHDNCKIIAIDNSP-----------AMIERCRRHIDAYKAPTPV 125 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTC-------------CSSSCEEEEEESCH-----------HHHHHHHHHHHTSCCSSCE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhc-------------CCCCCEEEEEECCH-----------HHHHHHHHHHHhhccCceE
Confidence 45799999999999998886322 23568999999752 222323222 1211122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+. +++.+. |..++|+++|+++|||++. .|...+|+..++-|+|||+
T Consensus 126 ~~~~---~D~~~~--~~~~~d~v~~~~~l~~~~~---------------------------~~~~~~l~~i~~~LkpGG~ 173 (261)
T 4gek_A 126 DVIE---GDIRDI--AIENASMVVLNFTLQFLEP---------------------------SERQALLDKIYQGLNPGGA 173 (261)
T ss_dssp EEEE---SCTTTC--CCCSEEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred EEee---cccccc--cccccccceeeeeeeecCc---------------------------hhHhHHHHHHHHHcCCCcE
Confidence 3443 577553 4456999999999999743 1344589999999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHH-hccchhhhhc----cCCcCccCCCHHHHHHHHhcCCceEEe
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVL-EGLVEEAKVD----WFNLPYYAPSPEEVRHVIQTEGSFNIR 275 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d----~f~~P~y~~s~~E~~~~i~~~Gsf~i~ 275 (359)
|+++-..... . ...-+.+...+.+... .|. ++.++. .........|.+|+++.+++.| |+..
T Consensus 174 lii~e~~~~~--~---~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~v 240 (261)
T 4gek_A 174 LVLSEKFSFE--D---AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEHS 240 (261)
T ss_dssp EEEEEEBCCS--S---HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSEE
T ss_pred EEEEeccCCC--C---HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCeE
Confidence 9998776654 1 2222333333333322 343 222111 1111223458999999999999 8743
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.29 E-value=2.4e-11 Score=108.71 Aligned_cols=161 Identities=16% Similarity=0.182 Sum_probs=105.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+.+ + ..+++..|+.. ......+.... .+-.|+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~-----------~~~~~a~~~~~--~~~~~~ 94 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLL--------A---------GRTVYGIEPSR-----------EMRMIAKEKLP--KEFSIT 94 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHH--------T---------TCEEEEECSCH-----------HHHHHHHHHSC--TTCCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHh--------C---------CCeEEEEeCCH-----------HHHHHHHHhCC--CceEEE
Confidence 357999999999998887762 1 26788888742 12222222211 112233
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++....++ +++|+++++.++||+.+.. ...+|+.-++-|+|||++++
T Consensus 95 ---~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~---------------------------~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 95 ---EGDFLSFEVP-TSIDTIVSTYAFHHLTDDE---------------------------KNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp ---SCCSSSCCCC-SCCSEEEEESCGGGSCHHH---------------------------HHHHHHHHHHHSCTTCEEEE
T ss_pred ---eCChhhcCCC-CCeEEEEECcchhcCChHH---------------------------HHHHHHHHHHhcCCCCEEEE
Confidence 3677776667 9999999999999975521 12378888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecC
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDW 284 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~ 284 (359)
+.+...+ .. .....+..+...|...... -..+.++++.+++++++++.| |+|...+.....|
T Consensus 144 ~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~w 205 (220)
T 3hnr_A 144 ADTIFAD------QD---AYDKTVEAAKQRGFHQLAN---DLQTEYYTRIPVMQTIFENNG-FHVTFTRLNHFVW 205 (220)
T ss_dssp EEECBSS------HH---HHHHHHHHHHHTTCHHHHH---HHHHSCCCBHHHHHHHHHHTT-EEEEEEECSSSEE
T ss_pred EeccccC------hH---HHHHHHHHHHhCCCccchh---hcchhhcCCHHHHHHHHHHCC-CEEEEeeccceEE
Confidence 9876655 11 1222333333344321111 122457789999999999999 9998887655444
No 21
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=5.2e-11 Score=110.20 Aligned_cols=197 Identities=13% Similarity=0.107 Sum_probs=119.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. .+..+|+..|+.. .... . .....+-.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~-----------------~~~~~v~gvD~s~-----------~~~~---~-a~~~~~~~~- 80 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALA-----------------NQGLFVYAVEPSI-----------VMRQ---Q-AVVHPQVEW- 80 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHH-----------------TTTCEEEEECSCH-----------HHHH---S-SCCCTTEEE-
T ss_pred CCCEEEEEcCcccHHHHHHH-----------------hCCCEEEEEeCCH-----------HHHH---H-HHhccCCEE-
Confidence 46899999999999988776 1347899999752 1111 0 000111223
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++....+|++++|+|+|+.++||+.+ +..+|+.-.+-|+ ||++++
T Consensus 81 --~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-----------------------------~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 81 --FTGYAENLALPDKSVDGVISILAIHHFSH-----------------------------LEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp --ECCCTTSCCSCTTCBSEEEEESCGGGCSS-----------------------------HHHHHHHHHHHBC-SSCEEE
T ss_pred --EECchhhCCCCCCCEeEEEEcchHhhccC-----------------------------HHHHHHHHHHHhC-CcEEEE
Confidence 33677777788999999999999999744 3358888899999 999998
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecCCCC--
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDWDAN-- 287 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~~~~-- 287 (359)
..+..... ... .....+. .+.. ....++++.+++. ++++.| |++...+.+..++...
T Consensus 129 ~~~~~~~~-~~~--~~~~~~~----~~~~------------~~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~~p~~~~~~ 187 (261)
T 3ege_A 129 LTFDIRLA-QRI--WLYDYFP----FLWE------------DALRFLPLDEQIN-LLQENT-KRRVEAIPFLLPHDLSDL 187 (261)
T ss_dssp EEECGGGC-CCC--GGGGTCH----HHHH------------HHHTSCCHHHHHH-HHHHHH-CSEEEEEECCEETTCSBC
T ss_pred EEcCCchh-HHH--HHHHHHH----HHhh------------hhhhhCCCHHHHH-HHHHcC-CCceeEEEecCCCcCcch
Confidence 88876541 111 0001111 1100 0113577899999 999999 9998888887665431
Q ss_pred CCCCCcccccccccchhHHHHHHHHHhHHHHHhhcChhHHHHHHHHHHHHHHH
Q 036911 288 KDDGSKSLTSGRHTRGKNIAKSIRAVSESMLASHFGEEIMDDLFERLAKKISE 340 (359)
Q Consensus 288 ~~~~~~~~~~d~~~~~~~~~~~~Ra~~ep~l~~h~~~~i~delf~r~~~~~~~ 340 (359)
+.+.. -...+.......+...+ .+ ..+.++.++.+.++..+.+++
T Consensus 188 ~~~~~------~~~~~~~~~~~~~~~~~-~~-~~~~~~e~~~~~~~~~~~l~~ 232 (261)
T 3ege_A 188 FAAAA------WRRPELYLKAEVRAGIS-SF-ALANQDLVEKGLELLTADLNN 232 (261)
T ss_dssp CTTTT------TTCGGGGGSHHHHHTSH-HH-HHSCHHHHHHHHHHHHHHHHT
T ss_pred hhHHh------ccCchhhcCcchhcccc-ce-eecCHHHHHHHHHHHHHHHhc
Confidence 11100 00111111122222222 22 335777777777777776664
No 22
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.26 E-value=5e-10 Score=104.52 Aligned_cols=156 Identities=13% Similarity=0.185 Sum_probs=95.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. + .+|+..|+.. ......+.. .+...+-
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~---------------~-~~v~gvd~s~-----------~~~~~a~~~~~~~~~~~~~ 116 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY---------------D-VNVVGLTLSK-----------NQANHVQQLVANSENLRSK 116 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEESCH-----------HHHHHHHHHHHTCCCCSCE
T ss_pred CcCEEEEECCcccHHHHHHHHHc---------------C-CEEEEEECCH-----------HHHHHHHHHHHhcCCCCCe
Confidence 35799999999999988776332 2 4888888742 111112111 1211122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.++ .+++.. +| +++|+|+|..++|++.. .|+..+|+.-.+-|+|||+
T Consensus 117 ~~~---~~d~~~--~~-~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~LkpgG~ 163 (287)
T 1kpg_A 117 RVL---LAGWEQ--FD-EPVDRIVSIGAFEHFGH---------------------------ERYDAFFSLAHRLLPADGV 163 (287)
T ss_dssp EEE---ESCGGG--CC-CCCSEEEEESCGGGTCT---------------------------TTHHHHHHHHHHHSCTTCE
T ss_pred EEE---ECChhh--CC-CCeeEEEEeCchhhcCh---------------------------HHHHHHHHHHHHhcCCCCE
Confidence 233 356632 35 89999999999999743 1334588898999999999
Q ss_pred EEEEEecCCCCCCCCc-----hhHHHHHHHHHHHHHHhccchhhhhccCCcC-ccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 207 VLLSIIGNDRKPGDPR-----CTGWELLGVTLNDMVLEGLVEEAKVDWFNLP-YYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~-----~~~~~~l~~al~~mv~eGli~~e~~d~f~~P-~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+++..+...+ .... ...+. ...+.+..... ..| ...|+++++.+.+++.| |++..++.+
T Consensus 164 l~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 228 (287)
T 1kpg_A 164 MLLHTITGLH--PKEIHERGLPMSFT--FARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-FTVTRVQSL 228 (287)
T ss_dssp EEEEEEEECC--HHHHTTTTCSCHHH--HHHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred EEEEEecCCC--cccccccccccccc--ccchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 9999987765 1000 00000 00111111111 112 25679999999999999 999887654
No 23
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.24 E-value=9.4e-11 Score=108.72 Aligned_cols=162 Identities=19% Similarity=0.210 Sum_probs=102.1
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~ 125 (359)
+...+|+|+|||+|..+..+.+ . .|..+++..|+.. ......+.. .+.. +
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~ 88 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAK--------N-------NPDAEITSIDISP-----------ESLEKARENTEKNGIK-N 88 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHH--------H-------CTTSEEEEEESCH-----------HHHHHHHHHHHHTTCC-S
T ss_pred CCCCeEEEecCCCCHHHHHHHH--------h-------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCC-C
Confidence 3468999999999998887762 2 1457899999742 111111111 1211 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
..|+ .+++....++++++|+|+++.++||+.+.+ .+|+.-.+-|+|||
T Consensus 89 ~~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~L~pgG 136 (276)
T 3mgg_A 89 VKFL---QANIFSLPFEDSSFDHIFVCFVLEHLQSPE-----------------------------EALKSLKKVLKPGG 136 (276)
T ss_dssp EEEE---ECCGGGCCSCTTCEEEEEEESCGGGCSCHH-----------------------------HHHHHHHHHEEEEE
T ss_pred cEEE---EcccccCCCCCCCeeEEEEechhhhcCCHH-----------------------------HHHHHHHHHcCCCc
Confidence 2233 367777788999999999999999976633 37888899999999
Q ss_pred eEEEEEecCCCCCCCCc-hhHHHHHHHHHHHHHH-hccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 206 HVLLSIIGNDRKPGDPR-CTGWELLGVTLNDMVL-EGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~-~~~~~~l~~al~~mv~-eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
++++......+....+. ....... ..+..+.. .| ....+.+++..++++.| |++..++....+
T Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~l~~~l~~aG-f~~v~~~~~~~~ 201 (276)
T 3mgg_A 137 TITVIEGDHGSCYFHPEGKKAIEAW-NCLIRVQAYMK-------------GNSLVGRQIYPLLQESG-FEKIRVEPRMVY 201 (276)
T ss_dssp EEEEEEECGGGCEEESCCHHHHHHH-HHHHHHHHHTT-------------CCTTGGGGHHHHHHHTT-CEEEEEEEEEEE
T ss_pred EEEEEEcCCCCceECCCcHHHHHHH-HHHHHHHHhcC-------------CCcchHHHHHHHHHHCC-CCeEEEeeEEEE
Confidence 99998765433100011 1111111 11111111 11 12246688999999999 999998877654
Q ss_pred C
Q 036911 284 W 284 (359)
Q Consensus 284 ~ 284 (359)
.
T Consensus 202 ~ 202 (276)
T 3mgg_A 202 I 202 (276)
T ss_dssp E
T ss_pred C
Confidence 3
No 24
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.24 E-value=5.8e-11 Score=106.21 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=95.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC-------
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS------- 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~------- 122 (359)
...+|+|+|||+|.++..+++ + ..+|+..|+.. ...+..++..+.
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~--------~---------g~~V~gvD~S~-----------~~l~~a~~~~~~~~~~~~~ 73 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSG--------Q---------GYHVVGAELSE-----------AAVERYFTERGEQPHITSQ 73 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHH--------H---------CCEEEEEEECH-----------HHHHHHHHHHCSCSEEEEE
T ss_pred CCCEEEEeCCCCcHhHHHHHH--------C---------CCeEEEEeCCH-----------HHHHHHHHHccCCcccccc
Confidence 467999999999999988762 2 26888888752 222222222111
Q ss_pred -------CCCCeEEecccCCcccCCCCC-CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHH
Q 036911 123 -------NFGPCFIAGIPGSFYGRLFPN-KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFL 194 (359)
Q Consensus 123 -------~~~~~f~~~v~gsFy~~lfp~-~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL 194 (359)
..+-.|+. +++....+++ +++|+|++..++|++.. .+...+|
T Consensus 74 ~~~~~~~~~~v~~~~---~d~~~l~~~~~~~fD~v~~~~~l~~l~~---------------------------~~~~~~l 123 (203)
T 1pjz_A 74 GDFKVYAAPGIEIWC---GDFFALTARDIGHCAAFYDRAAMIALPA---------------------------DMRERYV 123 (203)
T ss_dssp TTEEEEECSSSEEEE---ECCSSSTHHHHHSEEEEEEESCGGGSCH---------------------------HHHHHHH
T ss_pred cccccccCCccEEEE---CccccCCcccCCCEEEEEECcchhhCCH---------------------------HHHHHHH
Confidence 11223444 5777666665 89999999999999742 1234588
Q ss_pred HHHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEE
Q 036911 195 TSRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNI 274 (359)
Q Consensus 195 ~~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i 274 (359)
+.-++-|+|||++++.+...+. . ...-|.+..+.+|+++.++. | |++
T Consensus 124 ~~~~r~LkpgG~~~l~~~~~~~--~-----------------------------~~~~~~~~~~~~el~~~~~~-g-f~i 170 (203)
T 1pjz_A 124 QHLEALMPQACSGLLITLEYDQ--A-----------------------------LLEGPPFSVPQTWLHRVMSG-N-WEV 170 (203)
T ss_dssp HHHHHHSCSEEEEEEEEESSCS--S-----------------------------SSSSCCCCCCHHHHHHTSCS-S-EEE
T ss_pred HHHHHHcCCCcEEEEEEEecCc--c-----------------------------ccCCCCCCCCHHHHHHHhcC-C-cEE
Confidence 8889999999996666654332 0 01123455789999999988 7 999
Q ss_pred eEEEEEee
Q 036911 275 RRFDIHTV 282 (359)
Q Consensus 275 ~~~e~~~~ 282 (359)
..++....
T Consensus 171 ~~~~~~~~ 178 (203)
T 1pjz_A 171 TKVGGQDT 178 (203)
T ss_dssp EEEEESSC
T ss_pred EEeccccc
Confidence 88876553
No 25
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.23 E-value=5.6e-11 Score=108.24 Aligned_cols=144 Identities=13% Similarity=0.127 Sum_probs=97.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+.+ . ..+++..|+.. ......+. ..-+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~-----------~~~~~a~~------~~~~ 85 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKE--------E---------GIESIGVDINE-----------DMIKFCEG------KFNV 85 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHH--------H---------TCCEEEECSCH-----------HHHHHHHT------TSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHh--------C---------CCcEEEEECCH-----------HHHHHHHh------hcce
Confidence 3458999999999998876652 1 14678888742 11111111 1122
Q ss_pred EecccCCcccC--CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 129 IAGIPGSFYGR--LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 129 ~~~v~gsFy~~--lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
+.++.... .+|++++|+|+|+.++||+.+ .++..+|+.-.+-|+|||+
T Consensus 86 ---~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~---------------------------~~~~~~l~~~~~~LkpgG~ 135 (240)
T 3dli_A 86 ---VKSDAIEYLKSLPDKYLDGVMISHFVEHLDP---------------------------ERLFELLSLCYSKMKYSSY 135 (240)
T ss_dssp ---ECSCHHHHHHTSCTTCBSEEEEESCGGGSCG---------------------------GGHHHHHHHHHHHBCTTCC
T ss_pred ---eeccHHHHhhhcCCCCeeEEEECCchhhCCc---------------------------HHHHHHHHHHHHHcCCCcE
Confidence 33455443 678999999999999999753 2345689999999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+++..++... ... +.+. .+ .....++++.+++.+++++.| |++..++.+.
T Consensus 136 l~~~~~~~~~--------~~~-----~~~~----~~-------~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 185 (240)
T 3dli_A 136 IVIESPNPTS--------LYS-----LINF----YI-------DPTHKKPVHPETLKFILEYLG-FRDVKIEFFE 185 (240)
T ss_dssp EEEEEECTTS--------HHH-----HHHH----TT-------STTCCSCCCHHHHHHHHHHHT-CEEEEEEEEC
T ss_pred EEEEeCCcch--------hHH-----HHHH----hc-------CccccccCCHHHHHHHHHHCC-CeEEEEEEec
Confidence 9999987655 111 1110 00 111235678899999999999 9998888764
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=1.1e-10 Score=103.17 Aligned_cols=143 Identities=17% Similarity=0.099 Sum_probs=102.3
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..+..+. +. ..+++..|+.. ......+.... +-.|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~~~~a~~~~~---~~~~~- 89 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLA--------SL---------GHQIEGLEPAT-----------RLVELARQTHP---SVTFH- 89 (203)
T ss_dssp CSCEEEETCTTCHHHHHHH--------HT---------TCCEEEECCCH-----------HHHHHHHHHCT---TSEEE-
T ss_pred CCeEEEecCCCCHHHHHHH--------hc---------CCeEEEEeCCH-----------HHHHHHHHhCC---CCeEE-
Confidence 5799999999999888776 21 25788888741 12222222111 22333
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
.+++....++++++|+|+++.++|+++. +|...+|+.-++-|+|||+++++
T Consensus 90 --~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 90 --HGTITDLSDSPKRWAGLLAWYSLIHMGP---------------------------GELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp --CCCGGGGGGSCCCEEEEEEESSSTTCCT---------------------------TTHHHHHHHHHHTEEEEEEEEEE
T ss_pred --eCcccccccCCCCeEEEEehhhHhcCCH---------------------------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 3677777788999999999999999752 13446899999999999999999
Q ss_pred EecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEee
Q 036911 211 IIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTV 282 (359)
Q Consensus 211 ~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~ 282 (359)
.+.... . ..+.....+.++.+.+++++++++.| |++.+++.+..
T Consensus 141 ~~~~~~--~-------------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 141 FFSGPS--L-------------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp EECCSS--C-------------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred EccCCc--h-------------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 987654 1 11222334667889999999999999 99999887653
No 27
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.22 E-value=8.9e-11 Score=106.45 Aligned_cols=145 Identities=13% Similarity=0.142 Sum_probs=98.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
+.+|+|+|||+|..+..+. .+..+|+..|+.. ......++.........-+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~-----------------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~v~ 118 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA-----------------SPERFVVGLDISE-----------SALAKANETYGSSPKAEYFS 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC-----------------BTTEEEEEECSCH-----------HHHHHHHHHHTTSGGGGGEE
T ss_pred CCCEEEeCCCCCHHHHHHH-----------------hCCCeEEEEECCH-----------HHHHHHHHHhhccCCCcceE
Confidence 4599999999999988664 1347888889742 11122222111100000112
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
.+.+++.. +.|++++|+|+++.++||++. .+...+|+.-++-|+|||++++.
T Consensus 119 ~~~~d~~~-~~~~~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 119 FVKEDVFT-WRPTELFDLIFDYVFFCAIEP---------------------------EMRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp EECCCTTT-CCCSSCEEEEEEESSTTTSCG---------------------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECchhc-CCCCCCeeEEEEChhhhcCCH---------------------------HHHHHHHHHHHHHCCCCcEEEEE
Confidence 23467755 447779999999999999741 13446888989999999999998
Q ss_pred EecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecC
Q 036911 211 IIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDW 284 (359)
Q Consensus 211 ~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~ 284 (359)
.+.... . ..-|.+..+.+++.+++++.| |++..++......
T Consensus 171 ~~~~~~--~------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~~ 211 (235)
T 3lcc_A 171 MYPITD--H------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEENPHAI 211 (235)
T ss_dssp ECCCSC--C------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEECTTCC
T ss_pred Eecccc--c------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEecCCcc
Confidence 876544 1 122456689999999999999 9999988776443
No 28
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.22 E-value=2.7e-10 Score=103.19 Aligned_cols=150 Identities=20% Similarity=0.231 Sum_probs=100.8
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+.+ . ..+++..|+.. ......+... ...+-.|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~--------~---------~~~v~~vD~s~-----------~~~~~a~~~~-~~~~~~~ 102 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSR--------T---------GYKAVGVDISE-----------VMIQKGKERG-EGPDLSF 102 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--------T---------TCEEEEEESCH-----------HHHHHHHTTT-CBTTEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHH--------c---------CCeEEEEECCH-----------HHHHHHHhhc-ccCCceE
Confidence 3457999999999998887762 1 25788888741 1111121111 1112233
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+. +++....+|++++|+|+++.++||+.+.. .+|+.-.+-|+|||+++
T Consensus 103 ~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~L~pgG~l~ 150 (242)
T 3l8d_A 103 IK---GDLSSLPFENEQFEAIMAINSLEWTEEPL-----------------------------RALNEIKRVLKSDGYAC 150 (242)
T ss_dssp EE---CBTTBCSSCTTCEEEEEEESCTTSSSCHH-----------------------------HHHHHHHHHEEEEEEEE
T ss_pred EE---cchhcCCCCCCCccEEEEcChHhhccCHH-----------------------------HHHHHHHHHhCCCeEEE
Confidence 33 57777778899999999999999974422 47888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++..+... ... .. .-...........+.+++++.+++++.| |++...+.+.
T Consensus 151 i~~~~~~~--~~~-----------------~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 201 (242)
T 3l8d_A 151 IAILGPTA--KPR-----------------EN--SYPRLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGVY 201 (242)
T ss_dssp EEEECTTC--GGG-----------------GG--GGGGGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred EEEcCCcc--hhh-----------------hh--hhhhhccccccccCCCHHHHHHHHHHcC-CEEEEeeccc
Confidence 99987765 100 00 0011112234556689999999999999 9998887654
No 29
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.22 E-value=2.9e-10 Score=104.01 Aligned_cols=148 Identities=12% Similarity=0.013 Sum_probs=94.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. ..+++..|+.. ...+..++ ..+...+-
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~----------------~~~v~gvD~s~-----------~~l~~a~~~~~~~~~~~~v 88 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH----------------GITGTGIDMSS-----------LFTAQAKRRAEELGVSERV 88 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT----------------CCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc----------------CCeEEEEeCCH-----------HHHHHHHHHHHhcCCCcce
Confidence 45799999999999988776321 25778888742 11121211 11221122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|. .+++.+.++ ++++|+|+|..++|++.+.+ .+|+.-++-|+|||+
T Consensus 89 ~~~---~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~-----------------------------~~l~~~~r~LkpgG~ 135 (256)
T 1nkv_A 89 HFI---HNDAAGYVA-NEKCDVAACVGATWIAGGFA-----------------------------GAEELLAQSLKPGGI 135 (256)
T ss_dssp EEE---ESCCTTCCC-SSCEEEEEEESCGGGTSSSH-----------------------------HHHHHHTTSEEEEEE
T ss_pred EEE---ECChHhCCc-CCCCCEEEECCChHhcCCHH-----------------------------HHHHHHHHHcCCCeE
Confidence 333 367766555 78999999999999976533 378888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+++....... .... ..+.. ... . .....+++.+++.+++++.| |++..++.
T Consensus 136 l~~~~~~~~~--~~~~--------~~~~~----~~~------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 186 (256)
T 1nkv_A 136 MLIGEPYWRQ--LPAT--------EEIAQ----ACG------V-SSTSDFLTLPGLVGAFDDLG-YDVVEMVL 186 (256)
T ss_dssp EEEEEEEETT--CCSS--------HHHHH----TTT------C-SCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred EEEecCcccC--CCCh--------HHHHH----HHh------c-ccccccCCHHHHHHHHHHCC-CeeEEEEe
Confidence 9998775543 1110 00000 100 0 11225689999999999999 98876553
No 30
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.21 E-value=2.5e-10 Score=101.43 Aligned_cols=158 Identities=15% Similarity=0.120 Sum_probs=97.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+.+. ..+++..|+.. ......+. .+. .+-.|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~~D~s~-----------~~~~~a~~-~~~-~~~~~~ 95 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGL-----------------ADRVTALDGSA-----------EMIAEAGR-HGL-DNVEFR 95 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHH-----------------SSEEEEEESCH-----------HHHHHHGG-GCC-TTEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhc-----------------CCeEEEEeCCH-----------HHHHHHHh-cCC-CCeEEE
Confidence 3469999999999988877622 15788888741 11121221 221 122333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++... ++++++|+|+++.++|++.+ | ++..+|+.-.+-|+|||++++
T Consensus 96 ---~~d~~~~-~~~~~~D~v~~~~~l~~~~~-~--------------------------~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 96 ---QQDLFDW-TPDRQWDAVFFAHWLAHVPD-D--------------------------RFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp ---ECCTTSC-CCSSCEEEEEEESCGGGSCH-H--------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ---ecccccC-CCCCceeEEEEechhhcCCH-H--------------------------HHHHHHHHHHHHcCCCeEEEE
Confidence 3577554 89999999999999999754 1 233588888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhc---cchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEG---LVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eG---li~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+..++.. . . +...+....... .+.. -..+.....+++++|+.+++++.| |+|+..+...
T Consensus 145 ~~~~~~~--~----~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~ 206 (218)
T 3ou2_A 145 VDVTDHE--R----R----LEQQDDSEPEVAVRRTLQD--GRSFRIVKVFRSPAELTERLTALG-WSCSVDEVHP 206 (218)
T ss_dssp EEECCCC----------------------CEEEEECTT--SCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEET
T ss_pred EeCCCCc--c----c----cchhhhcccccceeeecCC--cchhhHhhcCCCHHHHHHHHHHCC-CEEEeeeccc
Confidence 9998854 1 0 011111100000 0000 000111123679999999999999 9988776543
No 31
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.19 E-value=2.4e-10 Score=102.63 Aligned_cols=177 Identities=15% Similarity=0.061 Sum_probs=108.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC-CCC--
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS-NFG-- 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~-~~~-- 125 (359)
+...+|+|+|||+|..+..+++. ..+++..|+.. ......+..... ...
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~ 80 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-----------------GYSVTGIDINS-----------EAIRLAETAARSPGLNQK 80 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHTTCCSCCSS
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-----------------CCeEEEEECCH-----------HHHHHHHHHHHhcCCccc
Confidence 34679999999999988877621 26788888742 111222221110 000
Q ss_pred -CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 126 -PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 126 -~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
...+..+.+++....++++++|+++++.++|++.+.. ++..+|+.-.+-|+||
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--------------------------~~~~~l~~~~~~L~pg 134 (235)
T 3sm3_A 81 TGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPK--------------------------ERSRIIKEVFRVLKPG 134 (235)
T ss_dssp SSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHH--------------------------HHHHHHHHHHHHEEEE
T ss_pred cCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHH--------------------------HHHHHHHHHHHHcCCC
Confidence 0122233467777778899999999999999976522 2335888889999999
Q ss_pred ceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccC--CcCccCCCHHHHHHHHhcCCceEEeEEEEEee
Q 036911 205 GHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWF--NLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTV 282 (359)
Q Consensus 205 G~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f--~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~ 282 (359)
|+++++.+++.. ..+ .........+......|.......... ....++++.+|+++++++.| |++..++....
T Consensus 135 G~l~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~~~~~~~~ 209 (235)
T 3sm3_A 135 AYLYLVEFGQNW--HLK--LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEIDYFRVKEL 209 (235)
T ss_dssp EEEEEEEEBCCT--TSH--HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEEEEEEEEE
T ss_pred eEEEEEECCcch--hHH--HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEEEEEecce
Confidence 999999998865 211 111112222222111221111100100 12346789999999999999 99999987665
Q ss_pred cC
Q 036911 283 DW 284 (359)
Q Consensus 283 ~~ 284 (359)
+.
T Consensus 210 ~~ 211 (235)
T 3sm3_A 210 ET 211 (235)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 32
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.18 E-value=1.8e-10 Score=105.14 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=97.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++.. ..+++..|+.. ......++......+-.|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~- 144 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL----------------YATTDLLEPVK-----------HMLEEAKRELAGMPVGKF- 144 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH----------------CSEEEEEESCH-----------HHHHHHHHHTTTSSEEEE-
T ss_pred CCCEEEEECCCcCHHHHHHHHhh----------------cCEEEEEeCCH-----------HHHHHHHHHhccCCceEE-
Confidence 46899999999999988776332 14677778631 122222222111111123
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++....++++++|+|+++.++|++++ .|+..+|+...+-|+|||++++
T Consensus 145 --~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 145 --ILASMETATLPPNTYDLIVIQWTAIYLTD---------------------------ADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp --EESCGGGCCCCSSCEEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred --EEccHHHCCCCCCCeEEEEEcchhhhCCH---------------------------HHHHHHHHHHHHhcCCCeEEEE
Confidence 34677777788899999999999999743 1344688899999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
....... . +.+ .....+.++++.+++++++++.| |++.+++..
T Consensus 196 ~~~~~~~--~--------------------~~~-----~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 196 KENCSTG--D--------------------RFL-----VDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp EEEBC----C--------------------CEE-----EETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred EecCCCc--c--------------------cce-----ecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 9864433 1 000 01122446779999999999999 999887654
No 33
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.17 E-value=3.9e-10 Score=107.05 Aligned_cols=209 Identities=10% Similarity=0.070 Sum_probs=119.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. ..+|+..|+.. ......++. .+.....
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~----------------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~v 142 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF----------------DVNVIGLTLSK-----------NQHARCEQVLASIDTNRSR 142 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CCEEEEEESCH-----------HHHHHHHHHHHTSCCSSCE
T ss_pred CcCEEEEEcccchHHHHHHHHHC----------------CCEEEEEECCH-----------HHHHHHHHHHHhcCCCCce
Confidence 35799999999999888776332 15788888742 111212211 1211112
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.++ .+++... | +++|+|+|+.++|++.. .|+..+|+.-.+-|+|||+
T Consensus 143 ~~~---~~d~~~~--~-~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~LkpgG~ 189 (318)
T 2fk8_A 143 QVL---LQGWEDF--A-EPVDRIVSIEAFEHFGH---------------------------ENYDDFFKRCFNIMPADGR 189 (318)
T ss_dssp EEE---ESCGGGC--C-CCCSEEEEESCGGGTCG---------------------------GGHHHHHHHHHHHSCTTCE
T ss_pred EEE---ECChHHC--C-CCcCEEEEeChHHhcCH---------------------------HHHHHHHHHHHHhcCCCcE
Confidence 333 3565332 4 89999999999999743 1344688888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHH-------HHHHHHHHHHHhccchhhhhccCCcC-ccCCCHHHHHHHHhcCCceEEeEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWE-------LLGVTLNDMVLEGLVEEAKVDWFNLP-YYAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~-------~l~~al~~mv~eGli~~e~~d~f~~P-~y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
+++..+...+ . ..+. .-...+.+.... ...| .+.|+.+++.+.+++.| |++..++
T Consensus 190 l~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~ 252 (318)
T 2fk8_A 190 MTVQSSVSYH--P----YEMAARGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEPL 252 (318)
T ss_dssp EEEEEEECCC--H----HHHHTTCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCCE
T ss_pred EEEEEeccCC--c----hhhhhccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEEE
Confidence 9999998765 1 1100 000011111111 1123 46689999999999999 9887665
Q ss_pred EEeecCCCCCCCCCcccccccccchhHHHHHHHHHhH--HHHHhhcChhHHHHHHHHHHHHHHHHHhhCCCCEEEEEE
Q 036911 279 IHTVDWDANKDDGSKSLTSGRHTRGKNIAKSIRAVSE--SMLASHFGEEIMDDLFERLAKKISEYLEFAPGHSTTMVI 354 (359)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~Ra~~e--p~l~~h~~~~i~delf~r~~~~~~~~~~~~~~~~~~~~~ 354 (359)
.+... ++..+..|.+.+.. +-+...++++.. ..+..|-...++.+......+.++++
T Consensus 253 ~~~~~------------------y~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~f~~g~~~~~~~~~ 311 (318)
T 2fk8_A 253 SLRPH------------------YIKTLRIWGDTLQSNKDKAIEVTSEEVY-NRYMKYLRGCEHYFTDEMLDCSLVTY 311 (318)
T ss_dssp ECHHH------------------HHHHHHHHHHHHHHTHHHHHHHSCHHHH-HHHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred ecchh------------------HHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 44321 23344444433322 122233444433 33555555555555555565555443
No 34
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.16 E-value=2e-10 Score=105.11 Aligned_cols=163 Identities=14% Similarity=0.123 Sum_probs=99.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..++ +. .+ -+++..|+.. ......++... ..+-.|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~--------~~-------~~-~~v~~vD~s~-----------~~~~~a~~~~~-~~~~~~~ 95 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAA--------EH-------GA-KKVLGIDLSE-----------RMLTEAKRKTT-SPVVCYE 95 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT-------TC-SEEEEEESCH-----------HHHHHHHHHCC-CTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hc-------CC-CEEEEEECCH-----------HHHHHHHHhhc-cCCeEEE
Confidence 46899999999999888776 22 12 2788888742 12222222211 1122333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++....++++++|+|+++.++||+.+. ..+|+.-++-|+|||++++
T Consensus 96 ---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 96 ---QKAIEDIAIEPDAYNVVLSSLALHYIASF-----------------------------DDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp ---ECCGGGCCCCTTCEEEEEEESCGGGCSCH-----------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred ---EcchhhCCCCCCCeEEEEEchhhhhhhhH-----------------------------HHHHHHHHHHcCCCcEEEE
Confidence 36777777889999999999999997442 2488888999999999999
Q ss_pred EEecCCCCC----------CCCc-hhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEE
Q 036911 210 SIIGNDRKP----------GDPR-CTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 210 ~~~g~~~~~----------~~~~-~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
+........ .... ...+ .....++..... ...-....|.++.+++.+++++.| |++..++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~ 214 (253)
T 3g5l_A 144 SVEHPVFTADGRQDWYTDETGNKLHWPV-------DRYFNESMRTSH-FLGEDVQKYHRTVTTYIQTLLKNG-FQINSVI 214 (253)
T ss_dssp EEECHHHHSSSSCSCEECSSCCEEEEEE-------CCTTCCCEEEEE-ETTEEEEEECCCHHHHHHHHHHTT-EEEEEEE
T ss_pred EeCCCccccCccccceeccCCceEEEEe-------ccccccceEEEe-eccccCccEecCHHHHHHHHHHcC-Ceeeeee
Confidence 875431100 0000 0000 000001100000 000124456779999999999999 9998876
Q ss_pred EEe
Q 036911 279 IHT 281 (359)
Q Consensus 279 ~~~ 281 (359)
...
T Consensus 215 e~~ 217 (253)
T 3g5l_A 215 EPE 217 (253)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 35
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.16 E-value=5.6e-10 Score=100.77 Aligned_cols=154 Identities=10% Similarity=0.066 Sum_probs=96.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. . .+++..|+.. ......++.... +-.|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~--------~~-------~--~~v~gvD~s~-----------~~~~~a~~~~~~--~v~~~ 91 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQ--------EH-------F--NDITCVEASE-----------EAISHAQGRLKD--GITYI 91 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHT--------TT-------C--SCEEEEESCH-----------HHHHHHHHHSCS--CEEEE
T ss_pred CCCcEEEECCCCCHHHHHHH--------Hh-------C--CcEEEEeCCH-----------HHHHHHHHhhhC--CeEEE
Confidence 35689999999999888765 21 1 3677788642 122222222111 12233
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHH-HhhccCceEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRS-EEILSGGHVL 208 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra-~EL~pGG~l~ 208 (359)
.+++... ++++++|+|+++.+||++.+.+ .+|+.-+ +-|+|||+++
T Consensus 92 ---~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~~LkpgG~l~ 138 (250)
T 2p7i_A 92 ---HSRFEDA-QLPRRYDNIVLTHVLEHIDDPV-----------------------------ALLKRINDDWLAEGGRLF 138 (250)
T ss_dssp ---ESCGGGC-CCSSCEEEEEEESCGGGCSSHH-----------------------------HHHHHHHHTTEEEEEEEE
T ss_pred ---EccHHHc-CcCCcccEEEEhhHHHhhcCHH-----------------------------HHHHHHHHHhcCCCCEEE
Confidence 3566544 7889999999999999976532 4788888 9999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhh----hccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAK----VDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~----~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++.+.... ...... . ..|.+.... .+....-..+.+.+++.+++++.| |++.+.+.+.
T Consensus 139 i~~~~~~~--------~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 200 (250)
T 2p7i_A 139 LVCPNANA--------VSRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSGIF 200 (250)
T ss_dssp EEEECTTC--------HHHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred EEcCChHH--------HHHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEeeeE
Confidence 99876654 111111 0 122221110 000011124579999999999999 9998887654
No 36
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.16 E-value=5e-10 Score=99.78 Aligned_cols=151 Identities=13% Similarity=0.188 Sum_probs=94.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. ..+++..|+.. ......++. + ...+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~-~---~~~~~ 99 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALA--------DR---------GIEAVGVDGDR-----------TLVDAARAA-G---AGEVH 99 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESCH-----------HHHHHHHHT-C---SSCEE
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HC---------CCEEEEEcCCH-----------HHHHHHHHh-c---ccccc
Confidence 35899999999999887775 11 26788888742 122222221 1 22343
Q ss_pred ecccCCcccCCCCC-CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 130 AGIPGSFYGRLFPN-KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 130 ~~v~gsFy~~lfp~-~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
.+...++....+++ +++|+|+++.++| ..+. ..+|+.-++-|+|||+++
T Consensus 100 ~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~-----------------------------~~~l~~~~~~L~pgG~l~ 149 (227)
T 3e8s_A 100 LASYAQLAEAKVPVGKDYDLICANFALL-HQDI-----------------------------IELLSAMRTLLVPGGALV 149 (227)
T ss_dssp ECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCC-----------------------------HHHHHHHHHTEEEEEEEE
T ss_pred hhhHHhhcccccccCCCccEEEECchhh-hhhH-----------------------------HHHHHHHHHHhCCCeEEE
Confidence 32222222224444 4599999999999 3221 248888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhcc-----CCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDW-----FNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~-----f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+..+.......... ..+. ....... ...+.++++.+++.+++++.| |++.+++.
T Consensus 150 ~~~~~~~~~~~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 208 (227)
T 3e8s_A 150 IQTLHPWSVADGDY---------------QDGW-REESFAGFAGDWQPMPWYFRTLASWLNALDMAG-LRLVSLQE 208 (227)
T ss_dssp EEECCTTTTCTTCC---------------SCEE-EEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT-EEEEEEEC
T ss_pred EEecCccccCcccc---------------cccc-chhhhhccccCcccceEEEecHHHHHHHHHHcC-CeEEEEec
Confidence 99987755211100 0111 1111111 135678899999999999999 99988876
No 37
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.15 E-value=1.6e-10 Score=102.40 Aligned_cols=156 Identities=11% Similarity=0.050 Sum_probs=96.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
+.+|+|+|||+|..+..+.+ . +..+++..|+.. ......+. ..+...+-.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~--------~--------~~~~v~~~D~s~-----------~~~~~a~~~~~~~~~~~~~~ 96 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAK--------Q--------SDFSIRALDFSK-----------HMNEIALKNIADANLNDRIQ 96 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHH--------H--------SEEEEEEEESCH-----------HHHHHHHHHHHHTTCTTTEE
T ss_pred CCEEEEECCCCCHHHHHHHH--------c--------CCCeEEEEECCH-----------HHHHHHHHHHHhccccCceE
Confidence 34999999999998887762 1 347888889742 11111111 112111223
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
|+ .+++....++++++|+|+++.++||+.+. ..+|+.-.+-|+|||++
T Consensus 97 ~~---~~d~~~~~~~~~~~D~v~~~~~l~~~~~~-----------------------------~~~l~~~~~~L~pgG~l 144 (219)
T 3dlc_A 97 IV---QGDVHNIPIEDNYADLIVSRGSVFFWEDV-----------------------------ATAFREIYRILKSGGKT 144 (219)
T ss_dssp EE---ECBTTBCSSCTTCEEEEEEESCGGGCSCH-----------------------------HHHHHHHHHHEEEEEEE
T ss_pred EE---EcCHHHCCCCcccccEEEECchHhhccCH-----------------------------HHHHHHHHHhCCCCCEE
Confidence 33 36777777899999999999999997432 24888889999999999
Q ss_pred EEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 208 LLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 208 ~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
++...-... ...+.+...+... ..-..... .......+.+++.+++++.| |++.++..
T Consensus 145 ~~~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~l~~aG-f~~v~~~~ 202 (219)
T 3dlc_A 145 YIGGGFGNK-------ELRDSISAEMIRK---NPDWKEFN---RKNISQENVERFQNVLDEIG-ISSYEIIL 202 (219)
T ss_dssp EEEECCSSH-------HHHHHHHHHHHHH---CTTHHHHH---HHHSSHHHHHHHHHHHHHHT-CSSEEEEE
T ss_pred EEEeccCcH-------HHHHHHHHHHHHh---HHHHHhhh---hhccccCCHHHHHHHHHHcC-CCeEEEEe
Confidence 997633322 1222222222221 10000000 01123348899999999999 98776654
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.13 E-value=3.6e-10 Score=100.92 Aligned_cols=143 Identities=17% Similarity=0.158 Sum_probs=99.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+.+.. .|..+++..|+.. ......+. ..+.. +-
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~~ 90 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMV--------------GEKGKVYAIDVQE-----------EMVNYAWEKVNKLGLK-NV 90 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHH--------------TTTCEEEEEESCH-----------HHHHHHHHHHHHHTCT-TE
T ss_pred CCCEEEEEecCCCHHHHHHHHHh--------------CCCcEEEEEECCH-----------HHHHHHHHHHHHcCCC-cE
Confidence 45799999999999999887432 2457899999742 11111111 11211 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+ .+++....++++++|+|+++.++||+.+. ..+|+.-.+-|+|||+
T Consensus 91 ~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~l~~~~~~LkpgG~ 138 (219)
T 3dh0_A 91 EVL---KSEENKIPLPDNTVDFIFMAFTFHELSEP-----------------------------LKFLEELKRVAKPFAY 138 (219)
T ss_dssp EEE---ECBTTBCSSCSSCEEEEEEESCGGGCSSH-----------------------------HHHHHHHHHHEEEEEE
T ss_pred EEE---ecccccCCCCCCCeeEEEeehhhhhcCCH-----------------------------HHHHHHHHHHhCCCeE
Confidence 333 35777777889999999999999997542 2488888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++++...... .. .+ .....+.+.+++.+.+++.| |++.+...+.
T Consensus 139 l~i~~~~~~~--~~------------------~~----------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 182 (219)
T 3dh0_A 139 LAIIDWKKEE--RD------------------KG----------PPPEEVYSEWEVGLILEDAG-IRVGRVVEVG 182 (219)
T ss_dssp EEEEEECSSC--CS------------------SS----------CCGGGSCCHHHHHHHHHHTT-CEEEEEEEET
T ss_pred EEEEEecccc--cc------------------cC----------CchhcccCHHHHHHHHHHCC-CEEEEEEeeC
Confidence 9999877665 10 00 11224568999999999999 9988876543
No 39
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.13 E-value=1.6e-09 Score=100.68 Aligned_cols=142 Identities=8% Similarity=-0.006 Sum_probs=95.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC-------
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS------- 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~------- 122 (359)
...+|+|+|||+|.++..++ ++ ..+|+..|+.. ...+..++..+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La--------~~---------G~~V~gvD~S~-----------~~i~~a~~~~~~~~~~~~~ 119 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFA--------DR---------GHTVVGVEISE-----------IGIREFFAEQNLSYTEEPL 119 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHH--------HT---------TCEEEEECSCH-----------HHHHHHHHHTTCCEEEEEC
T ss_pred CCCeEEEeCCCCcHHHHHHH--------HC---------CCeEEEEECCH-----------HHHHHHHHhcccccccccc
Confidence 45799999999999998876 22 26899999852 222222221110
Q ss_pred ------------CCCCeEEecccCCcccCCCCC-CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCcccc
Q 036911 123 ------------NFGPCFIAGIPGSFYGRLFPN-KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRD 189 (359)
Q Consensus 123 ------------~~~~~f~~~v~gsFy~~lfp~-~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d 189 (359)
..+-.|+ -+++.+..+++ +++|+|++..+||++.. . +
T Consensus 120 ~~~~~~~~~~~~~~~i~~~---~~D~~~l~~~~~~~FD~V~~~~~l~~l~~--~-------------------------~ 169 (252)
T 2gb4_A 120 AEIAGAKVFKSSSGSISLY---CCSIFDLPRANIGKFDRIWDRGALVAINP--G-------------------------D 169 (252)
T ss_dssp TTSTTCEEEEETTSSEEEE---ESCTTTGGGGCCCCEEEEEESSSTTTSCG--G-------------------------G
T ss_pred cccccccccccCCCceEEE---ECccccCCcccCCCEEEEEEhhhhhhCCH--H-------------------------H
Confidence 1112333 36887766654 89999999999999742 1 2
Q ss_pred HHHHHHHHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcC
Q 036911 190 FTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTE 269 (359)
Q Consensus 190 ~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~ 269 (359)
...+++.-++-|+|||++++..+..+. . ...-|.+..+++|+.+.++.
T Consensus 170 ~~~~l~~~~~~LkpGG~l~l~~~~~~~--~-----------------------------~~~g~~~~~~~~el~~~l~~- 217 (252)
T 2gb4_A 170 HDRYADIILSLLRKEFQYLVAVLSYDP--T-----------------------------KHAGPPFYVPSAELKRLFGT- 217 (252)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEECCT--T-----------------------------SCCCSSCCCCHHHHHHHHTT-
T ss_pred HHHHHHHHHHHcCCCeEEEEEEEecCC--c-----------------------------cCCCCCCCCCHHHHHHHhhC-
Confidence 335888889999999999876654332 0 01124455789999999986
Q ss_pred CceEEeEEEEEee
Q 036911 270 GSFNIRRFDIHTV 282 (359)
Q Consensus 270 Gsf~i~~~e~~~~ 282 (359)
+ |+|..++.++.
T Consensus 218 ~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 218 K-CSMQCLEEVDA 229 (252)
T ss_dssp T-EEEEEEEEEEC
T ss_pred C-eEEEEEecccc
Confidence 5 99999987653
No 40
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.13 E-value=3.3e-10 Score=107.59 Aligned_cols=151 Identities=9% Similarity=-0.063 Sum_probs=99.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. ..+|+..|+.. ......++ ..+...+-
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~----------------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~v 169 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF----------------GSRVEGVTLSA-----------AQADFGNRRARELRIDDHV 169 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEecCCCCHHHHHHHHHc----------------CCEEEEEeCCH-----------HHHHHHHHHHHHcCCCCce
Confidence 46799999999999998877332 26788888742 11111211 12221122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+. +++....++++++|+|+++.++||+. + ..+|+.-.+-|+|||+
T Consensus 170 ~~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~--~----------------------------~~~l~~~~~~LkpgG~ 216 (312)
T 3vc1_A 170 RSRV---CNMLDTPFDKGAVTASWNNESTMYVD--L----------------------------HDLFSEHSRFLKVGGR 216 (312)
T ss_dssp EEEE---CCTTSCCCCTTCEEEEEEESCGGGSC--H----------------------------HHHHHHHHHHEEEEEE
T ss_pred EEEE---CChhcCCCCCCCEeEEEECCchhhCC--H----------------------------HHHHHHHHHHcCCCcE
Confidence 3433 67777778899999999999999973 2 1388888999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+++......+. .......+..+. .. ..| .+++.+++.+++++.| |++..++.+.
T Consensus 217 l~~~~~~~~~~-~~~~~~~~~~~~--------~~----------~~~-~~~s~~~~~~~l~~aG-f~~~~~~~~~ 270 (312)
T 3vc1_A 217 YVTITGCWNPR-YGQPSKWVSQIN--------AH----------FEC-NIHSRREYLRAMADNR-LVPHTIVDLT 270 (312)
T ss_dssp EEEEEEEECTT-TCSCCHHHHHHH--------HH----------HTC-CCCBHHHHHHHHHTTT-EEEEEEEECH
T ss_pred EEEEEcccccc-ccchhHHHHHHH--------hh----------hcC-CCCCHHHHHHHHHHCC-CEEEEEEeCC
Confidence 99998877652 111111111111 00 111 4789999999999999 9998877553
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.12 E-value=7e-10 Score=98.70 Aligned_cols=141 Identities=17% Similarity=0.142 Sum_probs=97.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. ..+++..|+.. ......+...+ ..+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~~----~~~- 89 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML--------AA---------GFDVDATDGSP-----------ELAAEASRRLG----RPV- 89 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHT----SCC-
T ss_pred CCCcEEEECCCCCHHHHHHH--------Hc---------CCeEEEECCCH-----------HHHHHHHHhcC----Cce-
Confidence 45799999999999988776 21 25788888742 12222222211 122
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++.... +++++|+|+++.++|++.. .++..+|+.-++-|+|||++++
T Consensus 90 --~~~d~~~~~-~~~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 90 --RTMLFHQLD-AIDAYDAVWAHACLLHVPR---------------------------DELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp --EECCGGGCC-CCSCEEEEEECSCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred --EEeeeccCC-CCCcEEEEEecCchhhcCH---------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 235665544 8899999999999999652 2344689999999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++..... . ..+.+...+.+.+.+++++++++.|.|++..++...
T Consensus 140 ~~~~~~~--~--------------------------~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 140 SYKSGEG--E--------------------------GRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp EEECCSS--C--------------------------EECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred EEcCCCc--c--------------------------cccccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 9765543 1 011223345678999999999998878888877654
No 42
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.11 E-value=2.7e-09 Score=98.68 Aligned_cols=169 Identities=11% Similarity=-0.022 Sum_probs=98.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. .|..+++..|+....+.+ |......++. .+...+-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~--------------g~~~~v~gvD~s~~~~~~-----~~~~~~a~~~~~~~~~~~~v 103 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQV--------------GSSGHVTGIDIASPDYGA-----PLTLGQAWNHLLAGPLGDRL 103 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------------CTTCEEEEECSSCTTCCS-----SSCHHHHHHHHHTSTTGGGE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEECCcccccc-----HHHHHHHHHHHHhcCCCCce
Confidence 45799999999999998776332 245789999985421000 0011111111 1110011
Q ss_pred eEEecccCC-cc--cCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 127 CFIAGIPGS-FY--GRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 127 ~f~~~v~gs-Fy--~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
.|. .++ +. ...++++++|+|+|+.++|++.+.. .+++...+-++|
T Consensus 104 ~~~---~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~~~~~~~l~~~ 151 (275)
T 3bkx_A 104 TVH---FNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN-----------------------------ALALLFKNMAAV 151 (275)
T ss_dssp EEE---CSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH-----------------------------HHHHHHHHHTTT
T ss_pred EEE---ECChhhhccCCCCCCCEEEEEEccchhhCCCHH-----------------------------HHHHHHHHHhCC
Confidence 232 344 42 3456789999999999999976532 256565555566
Q ss_pred CceEEEEEecCCCCCCCCc--hhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 204 GGHVLLSIIGNDRKPGDPR--CTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 204 GG~l~~~~~g~~~~~~~~~--~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
||++++....... ..+. ...+..+....... ...........+++.+++.+++++.| |++.+.+.+
T Consensus 152 gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~s~~~l~~~l~~aG-f~~~~~~~~ 219 (275)
T 3bkx_A 152 CDHVDVAEWSMQP--TALDQIGHLQAAMIQGLLYA--------IAPSDVANIRTLITPDTLAQIAHDNT-WTYTAGTIV 219 (275)
T ss_dssp CSEEEEEEECSSC--SSGGGHHHHHHHHHHHHHHH--------HSCCTTCSCCCCCCHHHHHHHHHHHT-CEEEECCCB
T ss_pred CCEEEEEEecCCC--CchhhhhHHHHHHHHHHHhh--------ccccccccccccCCHHHHHHHHHHCC-CeeEEEEEe
Confidence 9999999887765 2111 11111111111110 00011223446799999999999999 999887766
No 43
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.6e-10 Score=107.43 Aligned_cols=151 Identities=17% Similarity=0.294 Sum_probs=94.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---h-CCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---K-GSNFG 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~-~~~~~ 125 (359)
...+|+|+|||+|..+..+++.+ .+..+|+..|+.. ......++. . +...+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~ 90 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQEL--------------KPFEQIIGSDLSA-----------TMIKTAEVIKEGSPDTYKN 90 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHS--------------SCCSEEEEEESCH-----------HHHHHHHHHHHHCC-CCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--------------CCCCEEEEEeCCH-----------HHHHHHHHHHHhccCCCCc
Confidence 46899999999999998887321 1458899999742 111212111 1 11112
Q ss_pred CeEEecccCCcccCCCCC------CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 126 PCFIAGIPGSFYGRLFPN------KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~------~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
-.|+. +++.+..+++ +++|+|+++.++||+ +.+ .+|+.-++
T Consensus 91 v~~~~---~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~-----------------------------~~l~~~~~ 137 (299)
T 3g5t_A 91 VSFKI---SSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFE-----------------------------KFQRSAYA 137 (299)
T ss_dssp EEEEE---CCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHH-----------------------------HHHHHHHH
T ss_pred eEEEE---cCHHhCCccccccccCCCeeEEeHhhHHHHh-CHH-----------------------------HHHHHHHH
Confidence 23433 5666666666 899999999999998 422 48888899
Q ss_pred hhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccC-CCHHHHHHHHhcCCceE
Q 036911 200 EILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYA-PSPEEVRHVIQTEGSFN 273 (359)
Q Consensus 200 EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~-~s~~E~~~~i~~~Gsf~ 273 (359)
-|+|||+|++...+.......+ .+...+.++... . ...-|+.. |..+.+++.+++.| |.
T Consensus 138 ~LkpgG~l~i~~~~~~~~~~~~------~~~~~~~~~~~~----~----~~~~~~w~~p~~~~~~~~l~~~g-fp 197 (299)
T 3g5t_A 138 NLRKDGTIAIWGYADPIFPDYP------EFDDLMIEVPYG----K----QGLGPYWEQPGRSRLRNMLKDSH-LD 197 (299)
T ss_dssp HEEEEEEEEEEEEEEEECTTCG------GGTTHHHHHHHC----T----TTTGGGSCTTHHHHHHTTTTTCC-CC
T ss_pred hcCCCcEEEEEecCCccccCcH------HHHHHHHHhccC----c----ccccchhhchhhHHHHHhhhccC-CC
Confidence 9999999999766543210111 111222222211 0 12334444 88889999999888 63
No 44
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.10 E-value=3.3e-09 Score=99.60 Aligned_cols=158 Identities=13% Similarity=0.142 Sum_probs=96.7
Q ss_pred CcceEEeecCCC---CcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCC
Q 036911 50 ECLKIADLGCSS---GPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~---G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~ 126 (359)
...+|+|+|||+ |..+..+. +. .|..+|+..|+. |......+.......+-
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~--------~~-------~p~~~v~~vD~s-----------p~~l~~Ar~~~~~~~~v 130 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQ--------SV-------NPDARVVYVDID-----------PMVLTHGRALLAKDPNT 130 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHH--------HH-------CTTCEEEEEESS-----------HHHHHHHHHHHTTCTTE
T ss_pred CCCEEEEECCCCCCCChHHHHHH--------Hh-------CCCCEEEEEECC-----------hHHHHHHHHhcCCCCCe
Confidence 357999999999 96543332 22 256899999974 12222222222111122
Q ss_pred eEEecccCCccc-----------CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHH
Q 036911 127 CFIAGIPGSFYG-----------RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLT 195 (359)
Q Consensus 127 ~f~~~v~gsFy~-----------~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~ 195 (359)
.|+ .+++.. ..++.+++|+++++.+|||+++- +...+|+
T Consensus 131 ~~~---~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~---------------------------~~~~~l~ 180 (274)
T 2qe6_A 131 AVF---TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD---------------------------VVDRVVG 180 (274)
T ss_dssp EEE---ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT---------------------------THHHHHH
T ss_pred EEE---EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH---------------------------HHHHHHH
Confidence 343 357653 13555689999999999997652 2235888
Q ss_pred HHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEe
Q 036911 196 SRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIR 275 (359)
Q Consensus 196 ~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~ 275 (359)
.-++-|+|||+|+++.+..+. + ..+.. +.++... ...|+++++.+|+.+++ .| |++.
T Consensus 181 ~~~~~L~pGG~l~i~~~~~~~----~--~~~~~----~~~~~~~----------~~~~~~~~s~~ei~~~l--~G-~~l~ 237 (274)
T 2qe6_A 181 AYRDALAPGSYLFMTSLVDTG----L--PAQQK----LARITRE----------NLGEGWARTPEEIERQF--GD-FELV 237 (274)
T ss_dssp HHHHHSCTTCEEEEEEEBCSS----C--HHHHH----HHHHHHH----------HHSCCCCBCHHHHHHTT--TT-CEEC
T ss_pred HHHHhCCCCcEEEEEEecCcc----h--HHHHH----HHHHHHh----------cCCCCccCCHHHHHHHh--CC-CeEc
Confidence 889999999999999987643 1 11111 1111110 01267889999999999 47 8877
Q ss_pred EEEEEee-cCCC
Q 036911 276 RFDIHTV-DWDA 286 (359)
Q Consensus 276 ~~e~~~~-~~~~ 286 (359)
....... .|.+
T Consensus 238 ~~g~~~~~~w~p 249 (274)
T 2qe6_A 238 EPGVVYTALWRP 249 (274)
T ss_dssp TTCSEEGGGSSC
T ss_pred cCcEeccccccC
Confidence 6444432 3654
No 45
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.09 E-value=7.6e-10 Score=102.72 Aligned_cols=87 Identities=14% Similarity=0.113 Sum_probs=64.4
Q ss_pred CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCc
Q 036911 143 NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPR 222 (359)
Q Consensus 143 ~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~ 222 (359)
.+++|+|+|+.+|||+..-+ .|+...|+.-++-|||||+|+++.....+ . +
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~-------------------------~~~~~~l~~i~r~LKPGG~li~~~~~~~~--~--~ 204 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL-------------------------DAYRAALCNLASLLKPGGHLVTTVTLRLP--S--Y 204 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH-------------------------HHHHHHHHHHHTTEEEEEEEEEEEESSCC--E--E
T ss_pred cCCCCEeeehHHHHHhcCCH-------------------------HHHHHHHHHHHHHcCCCcEEEEEEeecCc--c--c
Confidence 57999999999999965422 24556888889999999999999765443 0 0
Q ss_pred hhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEee
Q 036911 223 CTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTV 282 (359)
Q Consensus 223 ~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~ 282 (359)
. .| .-..+.+..+.+|+.+.+++.| |++..++....
T Consensus 205 --~-------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~~ 240 (263)
T 2a14_A 205 --M-------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLHSPQ 240 (263)
T ss_dssp --E-------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEECC
T ss_pred --e-------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEeeccc
Confidence 0 11 0013445679999999999999 99999887653
No 46
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.08 E-value=4.2e-10 Score=105.49 Aligned_cols=90 Identities=21% Similarity=0.192 Sum_probs=66.0
Q ss_pred CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEEecCCCCCCC
Q 036911 141 FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGD 220 (359)
Q Consensus 141 fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~ 220 (359)
+|++++|+|+|+.+|||+..-. .|+..+|+.-++-|+|||+|++...-..+ .
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~-------------------------~~~~~~l~~~~r~LkpGG~l~~~~~~~~~--~- 221 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL-------------------------ASFQRALDHITTLLRPGGHLLLIGALEES--W- 221 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH-------------------------HHHHHHHHHHHTTEEEEEEEEEEEEESCC--E-
T ss_pred cCCCCCCEEEehhhhhhhcCCH-------------------------HHHHHHHHHHHHhcCCCCEEEEEEecCcc--e-
Confidence 5668899999999999965421 14556899999999999999998543322 0
Q ss_pred CchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 221 PRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 221 ~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
+ . .| .-..+.++.+.+++.+++++.| |++..++.+..+
T Consensus 222 -~--~-------------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 222 -Y--L-------------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp -E--E-------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred -E--E-------------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 0 0 00 1123557789999999999999 999998877643
No 47
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.08 E-value=1.5e-09 Score=101.14 Aligned_cols=161 Identities=15% Similarity=0.185 Sum_probs=99.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~ 125 (359)
+...+|+|+|||+|..+..+. +. +..+++..|+.. ......+.. .+...+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~--------~~--------~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~ 115 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYE--------RA--------GIGEYYGVDIAE-----------VSINDARVRARNMKRRFK 115 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHH--------HH--------TCSEEEEEESCH-----------HHHHHHHHHHHTSCCSSE
T ss_pred CCCCeEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCH-----------HHHHHHHHHHHhcCCCcc
Confidence 346799999999999988754 21 224888888742 111212211 111101
Q ss_pred CeEEecccCCcccCCC-CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 126 PCFIAGIPGSFYGRLF-PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lf-p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
-.| +.+++....+ +++++|+|+++.++||+-..+ .|...+|+.-++-|+||
T Consensus 116 v~~---~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~-------------------------~~~~~~l~~~~~~Lkpg 167 (298)
T 1ri5_A 116 VFF---RAQDSYGRHMDLGKEFDVISSQFSFHYAFSTS-------------------------ESLDIAQRNIARHLRPG 167 (298)
T ss_dssp EEE---EESCTTTSCCCCSSCEEEEEEESCGGGGGSSH-------------------------HHHHHHHHHHHHTEEEE
T ss_pred EEE---EECCccccccCCCCCcCEEEECchhhhhcCCH-------------------------HHHHHHHHHHHHhcCCC
Confidence 123 3457766666 688999999999999952211 24556899999999999
Q ss_pred ceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhh------------------h-----ccC-CcCccCCCHH
Q 036911 205 GHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAK------------------V-----DWF-NLPYYAPSPE 260 (359)
Q Consensus 205 G~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~------------------~-----d~f-~~P~y~~s~~ 260 (359)
|++++..+.... ++. .+. ... +...- . +.. ..|.++.+++
T Consensus 168 G~l~~~~~~~~~--------~~~----~~~---~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 231 (298)
T 1ri5_A 168 GYFIMTVPSRDV--------ILE----RYK---QGR-MSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFT 231 (298)
T ss_dssp EEEEEEEECHHH--------HHH----HHH---HTC-CBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHH
T ss_pred CEEEEEECCHHH--------HHH----HHc---cCc-cCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHH
Confidence 999999865432 111 111 100 00000 0 000 2334678999
Q ss_pred HHHHHHhcCCceEEeEEEEEe
Q 036911 261 EVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 261 E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
++++++++.| |++...+.+.
T Consensus 232 ~l~~ll~~aG-f~~v~~~~~~ 251 (298)
T 1ri5_A 232 RMVDGFKRLG-LSLVERKGFI 251 (298)
T ss_dssp HHHHHHHTTT-EEEEEEEEHH
T ss_pred HHHHHHHHcC-CEEEEecCHH
Confidence 9999999999 9998876554
No 48
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.08 E-value=7.3e-10 Score=105.13 Aligned_cols=167 Identities=13% Similarity=0.204 Sum_probs=99.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC-----CCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG-----SNF 124 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~-----~~~ 124 (359)
...+|+|+|||+|..+..+.+ . +..+++..|+... . +............ ...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~--------~--------~~~~v~gvD~s~~---~----l~~a~~~~~~~~~~~~~~~~~ 90 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK--------G--------RINKLVCTDIADV---S----VKQCQQRYEDMKNRRDSEYIF 90 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH--------T--------TCSEEEEEESCHH---H----HHHHHHHHHHHHSSSCC-CCC
T ss_pred CCCEEEEECCCCcHHHHHHHh--------c--------CCCEEEEEeCCHH---H----HHHHHHHHHHhhhcccccccc
Confidence 467999999999999887752 1 2368888897521 0 0000111111000 000
Q ss_pred CCeEEecccCCcccCC----CC--CCceeEEEeccccccc-ccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHH
Q 036911 125 GPCFIAGIPGSFYGRL----FP--NKSLHFVHSSYSLHWL-SQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSR 197 (359)
Q Consensus 125 ~~~f~~~v~gsFy~~l----fp--~~S~d~~~S~~alhWl-s~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~R 197 (359)
+..|+. ++..... ++ ++++|+|+|+.++||+ .+.+ +...+|+.-
T Consensus 91 ~~~~~~---~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~--------------------------~~~~~l~~~ 141 (313)
T 3bgv_A 91 SAEFIT---ADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYE--------------------------QADMMLRNA 141 (313)
T ss_dssp EEEEEE---CCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHH--------------------------HHHHHHHHH
T ss_pred eEEEEE---ecccccchhhhcccCCCCEEEEEEecchhhccCCHH--------------------------HHHHHHHHH
Confidence 123333 5665443 53 4699999999999998 3322 344588899
Q ss_pred HHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHH--hc-------cchhhhh------------ccCCcCccC
Q 036911 198 SEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVL--EG-------LVEEAKV------------DWFNLPYYA 256 (359)
Q Consensus 198 a~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~--eG-------li~~e~~------------d~f~~P~y~ 256 (359)
++-|+|||++++++++.+. +...|...-. -| ..+.+.+ .....|.|.
T Consensus 142 ~~~LkpgG~li~~~~~~~~------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~ 209 (313)
T 3bgv_A 142 CERLSPGGYFIGTTPNSFE------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFL 209 (313)
T ss_dssp HTTEEEEEEEEEEEECHHH------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEEC
T ss_pred HHHhCCCcEEEEecCChHH------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceE
Confidence 9999999999999986532 1122221100 00 0011111 123456777
Q ss_pred CCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 257 PSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 257 ~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
.+.+++.+++++.| |++...+.+.
T Consensus 210 ~~~~~~~~l~~~~G-~~~v~~~~f~ 233 (313)
T 3bgv_A 210 VYFPLLNEMAKKYN-MKLVYKKTFL 233 (313)
T ss_dssp CCHHHHHHHGGGGT-EEEEEEEEHH
T ss_pred EcHHHHHHHHHHcC-cEEEEecCHH
Confidence 88999999999999 9988776554
No 49
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.08 E-value=4.2e-09 Score=94.51 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=93.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..+..+.+ . +..|+.. ......+.. +..++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~-------------------~--~~vD~s~-----------~~~~~a~~~-----~~~~~~ 90 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI-------------------K--IGVEPSE-----------RMAEIARKR-----GVFVLK 90 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC-------------------C--EEEESCH-----------HHHHHHHHT-----TCEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHH-------------------H--hccCCCH-----------HHHHHHHhc-----CCEEEE
Confidence 67999999999999886641 1 4445421 111111111 122333
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
+++....++++++|+|+++.++||+.+. ..+|+.-.+-|+|||+++++
T Consensus 91 ---~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 91 ---GTAENLPLKDESFDFALMVTTICFVDDP-----------------------------ERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp ---CBTTBCCSCTTCEEEEEEESCGGGSSCH-----------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred ---cccccCCCCCCCeeEEEEcchHhhccCH-----------------------------HHHHHHHHHHcCCCcEEEEE
Confidence 4666666788899999999999997542 24788889999999999999
Q ss_pred EecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 211 IIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 211 ~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
.+.+.. .+. ..+..+ ..+ ..+.....+.+.+++.+++++.| |++..+....
T Consensus 139 ~~~~~~--------~~~---~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~~ 189 (219)
T 1vlm_A 139 IVDRES--------FLG---REYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQTL 189 (219)
T ss_dssp EECSSS--------HHH---HHHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred EeCCcc--------HHH---HHHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEeccc
Confidence 886654 111 111111 111 12333456789999999999999 9998877543
No 50
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.06 E-value=4.8e-09 Score=101.02 Aligned_cols=155 Identities=14% Similarity=0.144 Sum_probs=97.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..+..++ +++ |..+++.-|+|. .-.. ..... ...+.. .. +.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~--~~~~------a~~~~-~~~~~~-~~--v~ 232 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVL--------RRH-------PQLTGQIWDLPT--TRDA------ARKTI-HAHDLG-GR--VE 232 (352)
T ss_dssp CCEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECGG--GHHH------HHHHH-HHTTCG-GG--EE
T ss_pred CCEEEEeCCCcCHHHHHHH--------HhC-------CCCeEEEEECHH--HHHH------HHHHH-HhcCCC-Cc--eE
Confidence 6899999999999988887 332 558888889852 1110 00111 111111 11 22
Q ss_pred cccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 131 GIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 131 ~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+.++|+... ++++++|+++++..||++++ .+...+|+.-++-|+|||++++
T Consensus 233 ~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 233 FFEKNLLDARNFEGGAADVVMLNDCLHYFDA---------------------------REAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp EEECCTTCGGGGTTCCEEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEeCCcccCcccCCCCccEEEEecccccCCH---------------------------HHHHHHHHHHHHHcCCCCEEEE
Confidence 3457887654 25677999999999998643 1234589999999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeE
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRR 276 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~ 276 (359)
.-...++....+ .+..+.+..+ |+.. .....++.+|+++++++.| |++.+
T Consensus 286 ~e~~~~~~~~~~---~~~~~~~~~~-~~~~------------~~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 286 LTMTMNDDRVTP---ALSADFSLHM-MVNT------------NHGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp EEECCCTTSSSS---HHHHHHHHHH-HHHS------------TTCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred EEeccCCCCCCC---chHHHhhHHH-HhhC------------CCCCcCCHHHHHHHHHHCC-Cceee
Confidence 887665521112 2221111111 1110 0113468999999999999 99887
No 51
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.05 E-value=3.3e-09 Score=101.53 Aligned_cols=150 Identities=21% Similarity=0.116 Sum_probs=96.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++ ++ |..+++.-|+|. .....++ ..+...+-
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~--------~~-------p~~~~~~~D~~~------------~~~~a~~~~~~~~~~~~v 221 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLT--------AH-------EDLSGTVLDLQG------------PASAAHRRFLDTGLSGRA 221 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHH--------HC-------TTCEEEEEECHH------------HHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEeCCChhHHHHHHHH--------HC-------CCCeEEEecCHH------------HHHHHHHhhhhcCcCcCe
Confidence 468999999999998887763 32 557788889851 1111111 11211122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.| +.++|+ ..+|. ++|++++..+||.+++ .+...+|+.-++-|+|||+
T Consensus 222 ~~---~~~d~~-~~~p~-~~D~v~~~~vlh~~~~---------------------------~~~~~~l~~~~~~L~pgG~ 269 (332)
T 3i53_A 222 QV---VVGSFF-DPLPA-GAGGYVLSAVLHDWDD---------------------------LSAVAILRRCAEAAGSGGV 269 (332)
T ss_dssp EE---EECCTT-SCCCC-SCSEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHHTTTCE
T ss_pred EE---ecCCCC-CCCCC-CCcEEEEehhhccCCH---------------------------HHHHHHHHHHHHhcCCCCE
Confidence 23 457887 55666 8999999999996543 1234589999999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+++.-...++ ..+ ...+++. -|+.. .-..++.+|+++++++.| |++.++...
T Consensus 270 l~i~e~~~~~--~~~-~~~~d~~-----~~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~~ 321 (332)
T 3i53_A 270 VLVIEAVAGD--EHA-GTGMDLR-----MLTYF-------------GGKERSLAELGELAAQAG-LAVRAAHPI 321 (332)
T ss_dssp EEEEECCCC-----C-CHHHHHH-----HHHHH-------------SCCCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred EEEEeecCCC--CCc-cHHHHHH-----HHhhC-------------CCCCCCHHHHHHHHHHCC-CEEEEEEEC
Confidence 9998776655 212 1111111 11111 124578999999999999 998877643
No 52
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=5.4e-09 Score=101.90 Aligned_cols=149 Identities=19% Similarity=0.208 Sum_probs=98.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+...+|+|+|||+|..+..++ +++ |..+++.-|+|. .....++ ..+...+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~------------~~~~a~~~~~~~~l~~~ 253 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVL--------DAF-------PGLRGTLLERPP------------VAEEARELLTGRGLADR 253 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHH------------HHHHHHHHHHHTTCTTT
T ss_pred ccCcEEEEeCCCccHHHHHHH--------HHC-------CCCeEEEEcCHH------------HHHHHHHhhhhcCcCCc
Confidence 346899999999999888776 332 568888889851 1111111 1121112
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.| +.++|+ ..+|. ++|++++...||+.++. +...+|+.-++-|+|||
T Consensus 254 v~~---~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~---------------------------~~~~~L~~~~~~L~pgG 301 (369)
T 3gwz_A 254 CEI---LPGDFF-ETIPD-GADVYLIKHVLHDWDDD---------------------------DVVRILRRIATAMKPDS 301 (369)
T ss_dssp EEE---EECCTT-TCCCS-SCSEEEEESCGGGSCHH---------------------------HHHHHHHHHHTTCCTTC
T ss_pred eEE---eccCCC-CCCCC-CceEEEhhhhhccCCHH---------------------------HHHHHHHHHHHHcCCCC
Confidence 223 347887 56666 89999999999986541 22358889999999999
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHH---HHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLND---MVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~---mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
++++.-...++ ... .+ ..+.+ |+..| -..++.+|+++++++.| |++.++..
T Consensus 302 ~l~i~e~~~~~--~~~---~~----~~~~d~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 302 RLLVIDNLIDE--RPA---AS----TLFVDLLLLVLVG-------------GAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp EEEEEEEBCCS--SCC---HH----HHHHHHHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred EEEEEEeccCC--CCC---Cc----hhHhhHHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 99998876655 211 11 11222 21111 13578999999999999 99988754
No 53
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.05 E-value=7.6e-09 Score=100.93 Aligned_cols=155 Identities=15% Similarity=0.171 Sum_probs=97.9
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+++ ++ |..+++..|+|. ...... .. +++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~--------~~-------p~~~~~~~D~~~-----~~~~a~-----------~~-~~v- 248 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVA--------KY-------PSINAINFDLPH-----VIQDAP-----------AF-SGV- 248 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------HC-------TTCEEEEEECHH-----HHTTCC-----------CC-TTE-
T ss_pred cCCCEEEEeCCCcCHHHHHHHH--------hC-------CCCEEEEEehHH-----HHHhhh-----------hc-CCC-
Confidence 3468999999999999988873 32 568889999851 110000 00 122
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
.-+.|+|++ .+|++ |++++..+||++++ .+...+|+.-++.|+|||+++
T Consensus 249 -~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~ 297 (368)
T 3reo_A 249 -EHLGGDMFD-GVPKG--DAIFIKWICHDWSD---------------------------EHCLKLLKNCYAALPDHGKVI 297 (368)
T ss_dssp -EEEECCTTT-CCCCC--SEEEEESCGGGBCH---------------------------HHHHHHHHHHHHHSCTTCEEE
T ss_pred -EEEecCCCC-CCCCC--CEEEEechhhcCCH---------------------------HHHHHHHHHHHHHcCCCCEEE
Confidence 234589986 67765 99999999996443 133458999999999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+.-...++....+ ..... ..+.++..-.. ...-..++.+|+++++++.| |++.++....
T Consensus 298 i~e~~~~~~~~~~-~~~~~---~~~~d~~~~~~---------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 356 (368)
T 3reo_A 298 VAEYILPPSPDPS-IATKV---VIHTDALMLAY---------NPGGKERTEKEFQALAMASG-FRGFKVASCA 356 (368)
T ss_dssp EEECCCCSSCCCC-HHHHH---HHHHHHHHHHH---------SSBCCCCCHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred EEEeccCCCCCCc-hhhhH---HHhhhHHHHhh---------cCCCccCCHHHHHHHHHHCC-CeeeEEEEeC
Confidence 9876654411111 00000 11122111100 01124578999999999999 9988776543
No 54
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.04 E-value=2.4e-09 Score=95.46 Aligned_cols=154 Identities=18% Similarity=0.127 Sum_probs=98.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. + .+ .+++..|+.. ......+... .-++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~--------~~-~~~~~~D~~~-----------~~~~~~~~~~-----~~~~ 78 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------E--------NG-TRVSGIEAFP-----------EAAEQAKEKL-----DHVV 78 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------T--------TT-CEEEEEESSH-----------HHHHHHHTTS-----SEEE
T ss_pred CCCcEEEeCCCCCHHHHHHH--------h--------cC-CeEEEEeCCH-----------HHHHHHHHhC-----CcEE
Confidence 46899999999999888765 1 13 6788888642 1111111110 1233
Q ss_pred ecccCCccc--CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 130 AGIPGSFYG--RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 130 ~~v~gsFy~--~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
. +++.. ..++++++|+++++.++|++.+.. .+|+.-.+-|+|||++
T Consensus 79 ~---~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~L~~gG~l 126 (230)
T 3cc8_A 79 L---GDIETMDMPYEEEQFDCVIFGDVLEHLFDPW-----------------------------AVIEKVKPYIKQNGVI 126 (230)
T ss_dssp E---SCTTTCCCCSCTTCEEEEEEESCGGGSSCHH-----------------------------HHHHHTGGGEEEEEEE
T ss_pred E---cchhhcCCCCCCCccCEEEECChhhhcCCHH-----------------------------HHHHHHHHHcCCCCEE
Confidence 3 45543 556789999999999999976522 3788889999999999
Q ss_pred EEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhcc-CCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 208 LLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDW-FNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 208 ~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~-f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
+++...... +. .+..+.. +......... -.....+.+.+++.+++++.| |++.+++.+...
T Consensus 127 ~~~~~~~~~---------~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 188 (230)
T 3cc8_A 127 LASIPNVSH---------IS----VLAPLLA-GNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYVD 188 (230)
T ss_dssp EEEEECTTS---------HH----HHHHHHT-TCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred EEEeCCcch---------HH----HHHHHhc-CCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEecccC
Confidence 999876544 11 1111111 1111110000 012335679999999999999 999988877543
No 55
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.04 E-value=2e-09 Score=104.66 Aligned_cols=160 Identities=18% Similarity=0.168 Sum_probs=97.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..++ +++ |..+++..|+|. .....++......-.--+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~------------~~~~a~~~~~~~~~~~~v 231 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV--------QYN-------KEVEVTIVDLPQ------------QLEMMRKQTAGLSGSERI 231 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH--------HHS-------TTCEEEEEECHH------------HHHHHHHHHTTCTTGGGE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HhC-------CCCEEEEEeCHH------------HHHHHHHHHHhcCcccce
Confidence 46799999999999998887 332 568999999852 111122111100000112
Q ss_pred ecccCCcccC--CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 130 AGIPGSFYGR--LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 130 ~~v~gsFy~~--lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
..+.++|+.. .+| +++|++++...||.+++ .+...+|+.-++.|+|||++
T Consensus 232 ~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~---------------------------~~~~~~l~~~~~~L~pgG~l 283 (363)
T 3dp7_A 232 HGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE---------------------------EEVISILTRVAQSIGKDSKV 283 (363)
T ss_dssp EEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH---------------------------HHHHHHHHHHHHHCCTTCEE
T ss_pred EEEEccccccCCCCC-CCcCEEEEechhhhCCH---------------------------HHHHHHHHHHHHhcCCCcEE
Confidence 2345788865 466 89999999999985432 23446888989999999999
Q ss_pred EEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEE
Q 036911 208 LLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 208 ~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
++.-...++ .......+.. .....+|.. ........++.+|+++++++.| |++.++.
T Consensus 284 ~i~e~~~~~--~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 284 YIMETLWDR--QRYETASYCL-TQISLYFTA----------MANGNSKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp EEEECCTTS--CSSHHHHHHH-HHHHHHHHH----------SSCSSCCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred EEEeeccCC--ccccchhhHH-HHhhhhHHh----------hhCCCCcccCHHHHHHHHHHcC-CeEEEEE
Confidence 998765554 2111111110 001111100 0011224569999999999999 9887654
No 56
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.03 E-value=6.9e-09 Score=101.15 Aligned_cols=155 Identities=15% Similarity=0.153 Sum_probs=98.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
....+|+|+|||+|..+..+++ ++ |..+++..|+|. ...... .. ++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~--------~~-------p~~~~~~~D~~~-----~~~~a~-----------~~-~~-- 245 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAA--------HY-------PTIKGVNFDLPH-----VISEAP-----------QF-PG-- 245 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------HC-------TTCEEEEEECHH-----HHTTCC-----------CC-TT--
T ss_pred cCCCEEEEeCCCCCHHHHHHHH--------HC-------CCCeEEEecCHH-----HHHhhh-----------hc-CC--
Confidence 3468999999999999888873 32 568889999852 111000 00 12
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+.-+.|+|++ .+|++ |++++.++||.+++ ++...+|+.-++.|+|||+++
T Consensus 246 v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d---------------------------~~~~~~L~~~~~~L~pgG~l~ 295 (364)
T 3p9c_A 246 VTHVGGDMFK-EVPSG--DTILMKWILHDWSD---------------------------QHCATLLKNCYDALPAHGKVV 295 (364)
T ss_dssp EEEEECCTTT-CCCCC--SEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHSCTTCEEE
T ss_pred eEEEeCCcCC-CCCCC--CEEEehHHhccCCH---------------------------HHHHHHHHHHHHHcCCCCEEE
Confidence 2234589987 77865 99999999985432 234468999999999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+.-...++. .+. ...+.. ..+.++.--. .+..-..++.+|+++++++.| |++.++....
T Consensus 296 i~e~~~~~~-~~~-~~~~~~--~~~~d~~m~~---------~~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 354 (364)
T 3p9c_A 296 LVQCILPVN-PEA-NPSSQG--VFHVDMIMLA---------HNPGGRERYEREFQALARGAG-FTGVKSTYIY 354 (364)
T ss_dssp EEECCBCSS-CCS-SHHHHH--HHHHHHHHHH---------HCSSCCCCBHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred EEEeccCCC-CCc-chhhhh--HHHhHHHHHh---------cccCCccCCHHHHHHHHHHCC-CceEEEEEcC
Confidence 987665441 111 111110 1111211100 011124578999999999999 9988876543
No 57
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.02 E-value=3.6e-09 Score=102.21 Aligned_cols=153 Identities=20% Similarity=0.191 Sum_probs=96.9
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+++. + |..+++.-|+|.. .. .. ... ..+.. .+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~~-----~~--~~---~~~-~~~~~-~~-- 233 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLRE--------H-------PGLQGVLLDRAEV-----VA--RH---RLD-APDVA-GR-- 233 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHH--------C-------TTEEEEEEECHHH-----HT--TC---CCC-CGGGT-TS--
T ss_pred cCCceEEEECCccCHHHHHHHHH--------C-------CCCEEEEecCHHH-----hh--cc---ccc-ccCCC-CC--
Confidence 45689999999999998888733 2 5688898898521 10 00 000 00111 11
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+.-+.++|+ ..+| ++|+++++.+||.+++ .+...+|+.-++.|+|||+++
T Consensus 234 v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d---------------------------~~~~~~L~~~~~~LkpgG~l~ 283 (348)
T 3lst_A 234 WKVVEGDFL-REVP--HADVHVLKRILHNWGD---------------------------EDSVRILTNCRRVMPAHGRVL 283 (348)
T ss_dssp EEEEECCTT-TCCC--CCSEEEEESCGGGSCH---------------------------HHHHHHHHHHHHTCCTTCEEE
T ss_pred eEEEecCCC-CCCC--CCcEEEEehhccCCCH---------------------------HHHHHHHHHHHHhcCCCCEEE
Confidence 223457887 5566 9999999999997543 123358999999999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+.-...++. ..+. +. .+.++..-. ...-..++.+|+++++++.| |++.++..
T Consensus 284 i~e~~~~~~-~~~~---~~----~~~d~~~~~----------~~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 284 VIDAVVPEG-NDAH---QS----KEMDFMMLA----------ARTGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp EEECCBCSS-SSCC---HH----HHHHHHHHH----------TTSCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred EEEeccCCC-CCcc---hh----hhcChhhhh----------cCCCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 987655441 1111 11 111111100 01124578999999999999 99988765
No 58
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.01 E-value=2.5e-09 Score=104.88 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=76.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---h-----C
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---K-----G 121 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~-----~ 121 (359)
...+|+|+|||+|..+..+++.. .|..+|+..|+.. ......++. . |
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~-----------~~l~~a~~~~~~~~~~~~g 137 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV--------------GEHGKVIGVDMLD-----------NQLEVARKYVEYHAEKFFG 137 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------------TTTCEEEEEECCH-----------HHHHHHHHTHHHHHHHHHS
T ss_pred CCCEEEEecCccCHHHHHHHHHh--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHhhhhccc
Confidence 35799999999999998887433 2457999999842 111111111 0 2
Q ss_pred -CC-CCCeEEecccCCcccC------CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHH
Q 036911 122 -SN-FGPCFIAGIPGSFYGR------LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLF 193 (359)
Q Consensus 122 -~~-~~~~f~~~v~gsFy~~------lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~f 193 (359)
.. .+-.|+. +++... .+|++++|+|+|+.++||+.+. ..+
T Consensus 138 ~~~~~~v~~~~---~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~-----------------------------~~~ 185 (383)
T 4fsd_A 138 SPSRSNVRFLK---GFIENLATAEPEGVPDSSVDIVISNCVCNLSTNK-----------------------------LAL 185 (383)
T ss_dssp STTCCCEEEEE---SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCH-----------------------------HHH
T ss_pred ccCCCceEEEE---ccHHHhhhcccCCCCCCCEEEEEEccchhcCCCH-----------------------------HHH
Confidence 11 1223433 566554 7899999999999999997552 248
Q ss_pred HHHHHHhhccCceEEEEEecCCC
Q 036911 194 LTSRSEEILSGGHVLLSIIGNDR 216 (359)
Q Consensus 194 L~~Ra~EL~pGG~l~~~~~g~~~ 216 (359)
|+.-.+-|+|||+|+++.+..+.
T Consensus 186 l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 186 FKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp HHHHHHHEEEEEEEEEEEEEESS
T ss_pred HHHHHHHcCCCCEEEEEEecccc
Confidence 88889999999999998876654
No 59
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.99 E-value=9.2e-10 Score=99.53 Aligned_cols=169 Identities=17% Similarity=0.187 Sum_probs=96.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. .. .+++..|+.. ......+..... .+-.+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~--------~~-------~~-~~v~~vD~s~-----------~~~~~a~~~~~~-~~~~~- 93 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH--------EH-------GA-SYVLGLDLSE-----------KMLARARAAGPD-TGITY- 93 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT-------TC-SEEEEEESCH-----------HHHHHHHHTSCS-SSEEE-
T ss_pred CCCEEEEEcCcCCHHHHHHH--------HC-------CC-CeEEEEcCCH-----------HHHHHHHHhccc-CCceE-
Confidence 35799999999999887765 21 11 2788888741 121222221111 01123
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++....++++++|+|+++.++|++.+. ..+|+.-++-|+|||++++
T Consensus 94 --~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 94 --ERADLDKLHLPQDSFDLAYSSLALHYVEDV-----------------------------ARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp --EECCGGGCCCCTTCEEEEEEESCGGGCSCH-----------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred --EEcChhhccCCCCCceEEEEeccccccchH-----------------------------HHHHHHHHHhcCcCcEEEE
Confidence 346777777888999999999999997542 2488888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHH-H--HHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 210 SIIGNDRKPGDPRCTGWELLG-V--TLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~-~--al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+...+............+.-. . .+.....++.....-+ .-....|+++.+|+.+++++.| |++..++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~~~ 214 (243)
T 3bkw_A 143 STEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWL-AKGVVKHHRTVGTTLNALIRSG-FAIEHVEEF 214 (243)
T ss_dssp EEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHH-HHSCCEEECCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred EeCCcccccCcCcceeecCCCceEEeecccccccceeeeec-cCceEEEeccHHHHHHHHHHcC-CEeeeeccC
Confidence 885421100000000000000 0 0000000000000000 0034556789999999999999 999887754
No 60
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.99 E-value=2.5e-09 Score=97.30 Aligned_cols=147 Identities=15% Similarity=0.142 Sum_probs=96.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..++ +. -..+++..|+.. ......++..... +..-+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~--------~~--------~~~~v~~vD~s~-----------~~~~~a~~~~~~~-~~~~~ 130 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL--------LP--------LFREVDMVDITE-----------DFLVQAKTYLGEE-GKRVR 130 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT--------TT--------TCSEEEEEESCH-----------HHHHHHHHHTGGG-GGGEE
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------cCCEEEEEeCCH-----------HHHHHHHHHhhhc-CCceE
Confidence 36899999999999888765 11 125788888742 1111121111000 00011
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
..+.+++....++++++|+|+++.++|++.+ | ++..+|+.-.+-|+|||++++
T Consensus 131 ~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 131 NYFCCGLQDFTPEPDSYDVIWIQWVIGHLTD-Q--------------------------HLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp EEEECCGGGCCCCSSCEEEEEEESCGGGSCH-H--------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEcChhhcCCCCCCEEEEEEcchhhhCCH-H--------------------------HHHHHHHHHHHhcCCCeEEEE
Confidence 1233577677778889999999999999755 1 233588888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
....... . ..... ..+.+.++.+++++++++.| |++.+.+..
T Consensus 184 ~~~~~~~--~--------------------~~~~~------~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 184 KDNMAQE--G--------------------VILDD------VDSSVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp EEEEBSS--S--------------------EEEET------TTTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred EEccCCC--c--------------------ceecc------cCCcccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 8776543 1 00000 12335569999999999999 999887765
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.98 E-value=5.2e-09 Score=96.33 Aligned_cols=105 Identities=14% Similarity=0.196 Sum_probs=71.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+. +. ..+++..|+.. ......++... +-.|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~~~~a~~~~~---~~~~ 97 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLA--------DS---------FGTVEGLELSA-----------DMLAIARRRNP---DAVL 97 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHT--------TT---------SSEEEEEESCH-----------HHHHHHHHHCT---TSEE
T ss_pred CCCCcEEEeCCcCCHHHHHHH--------Hc---------CCeEEEEECCH-----------HHHHHHHhhCC---CCEE
Confidence 446899999999999888775 21 24788888741 12222222111 2234
Q ss_pred EecccCCcccCCCCCCceeEEEecc-cccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSY-SLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~-alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+. +++....+ ++++|+|+++. ++||+.. ..|+..+|+.-++-|+|||++
T Consensus 98 ~~---~d~~~~~~-~~~fD~v~~~~~~l~~~~~--------------------------~~~~~~~l~~~~~~L~pgG~l 147 (263)
T 3pfg_A 98 HH---GDMRDFSL-GRRFSAVTCMFSSIGHLAG--------------------------QAELDAALERFAAHVLPDGVV 147 (263)
T ss_dssp EE---CCTTTCCC-SCCEEEEEECTTGGGGSCH--------------------------HHHHHHHHHHHHHTEEEEEEE
T ss_pred EE---CChHHCCc-cCCcCEEEEcCchhhhcCC--------------------------HHHHHHHHHHHHHhcCCCcEE
Confidence 43 56665444 78999999998 9999754 124456899999999999999
Q ss_pred EEEEecC
Q 036911 208 LLSIIGN 214 (359)
Q Consensus 208 ~~~~~g~ 214 (359)
++.....
T Consensus 148 ~i~~~~~ 154 (263)
T 3pfg_A 148 VVEPWWF 154 (263)
T ss_dssp EECCCCC
T ss_pred EEEeccC
Confidence 9975543
No 62
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.97 E-value=2.8e-09 Score=96.15 Aligned_cols=107 Identities=14% Similarity=0.232 Sum_probs=71.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh-CCCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK-GSNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~-~~~~~~~f 128 (359)
...+|+|+|||+|..+..+. +. ..+++..|+.. ......+... ....+-.|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~~~~~D~s~-----------~~~~~a~~~~~~~~~~~~~ 88 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLC--------PK---------FKNTWAVDLSQ-----------EMLSEAENKFRSQGLKPRL 88 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHG--------GG---------SSEEEEECSCH-----------HHHHHHHHHHHHTTCCCEE
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HC---------CCcEEEEECCH-----------HHHHHHHHHHhhcCCCeEE
Confidence 46799999999999988775 21 25788888742 1111111111 00001223
Q ss_pred EecccCCcccCCCCCCceeEEEecc-cccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSY-SLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~-alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+.+++....++ +++|+|+++. ++||+... .+...+|+.-++-|+|||++
T Consensus 89 ---~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~--------------------------~~~~~~l~~~~~~L~pgG~l 138 (246)
T 1y8c_A 89 ---ACQDISNLNIN-RKFDLITCCLDSTNYIIDS--------------------------DDLKKYFKAVSNHLKEGGVF 138 (246)
T ss_dssp ---ECCCGGGCCCS-CCEEEEEECTTGGGGCCSH--------------------------HHHHHHHHHHHTTEEEEEEE
T ss_pred ---EecccccCCcc-CCceEEEEcCccccccCCH--------------------------HHHHHHHHHHHHhcCCCcEE
Confidence 34577665566 8999999998 99997431 23456899999999999999
Q ss_pred EEEEecC
Q 036911 208 LLSIIGN 214 (359)
Q Consensus 208 ~~~~~g~ 214 (359)
++.+...
T Consensus 139 ~~~~~~~ 145 (246)
T 1y8c_A 139 IFDINSY 145 (246)
T ss_dssp EEEEECH
T ss_pred EEEecCH
Confidence 9987654
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.97 E-value=1.7e-09 Score=101.75 Aligned_cols=172 Identities=17% Similarity=0.155 Sum_probs=98.6
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCC-----CC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSN-----FG 125 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~-----~~ 125 (359)
..+|+|+|||+|..+..++ +. ..+|+..|+.. ......++..... .+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~~ 134 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFL--------DL---------GWEVTALELST-----------SVLAAFRKRLAEAPADVRDR 134 (299)
T ss_dssp CSCEEEETCTTTTTHHHHH--------TT---------TCCEEEEESCH-----------HHHHHHHHHHHTSCHHHHTT
T ss_pred CCcEEEEeccCCHHHHHHH--------Hc---------CCeEEEEECCH-----------HHHHHHHHHHhhcccccccc
Confidence 4599999999999998886 21 26788888742 1222222111100 01
Q ss_pred CeEEecccCCcccCCCCCCceeEEE-ecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVH-SSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~-S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
-.|+. +++....+ ++++|+|+ ++.++||++. .|...+|+.-++-|+||
T Consensus 135 v~~~~---~d~~~~~~-~~~fD~v~~~~~~~~~~~~---------------------------~~~~~~l~~~~~~L~pg 183 (299)
T 3g2m_A 135 CTLVQ---GDMSAFAL-DKRFGTVVISSGSINELDE---------------------------ADRRGLYASVREHLEPG 183 (299)
T ss_dssp EEEEE---CBTTBCCC-SCCEEEEEECHHHHTTSCH---------------------------HHHHHHHHHHHHHEEEE
T ss_pred eEEEe---CchhcCCc-CCCcCEEEECCcccccCCH---------------------------HHHHHHHHHHHHHcCCC
Confidence 23433 57766444 78999887 5688998642 23446899999999999
Q ss_pred ceEEEEEecCCCCCCCCchhHHHHHHHHHHHH-HHhccch---------------hhhhccCCcCccCCCHHHHHHHHhc
Q 036911 205 GHVLLSIIGNDRKPGDPRCTGWELLGVTLNDM-VLEGLVE---------------EAKVDWFNLPYYAPSPEEVRHVIQT 268 (359)
Q Consensus 205 G~l~~~~~g~~~~~~~~~~~~~~~l~~al~~m-v~eGli~---------------~e~~d~f~~P~y~~s~~E~~~~i~~ 268 (359)
|+|++..+........+....+......=... ....... ...+..+.....+.+++|+++++++
T Consensus 184 G~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~ 263 (299)
T 3g2m_A 184 GKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVR 263 (299)
T ss_dssp EEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHH
T ss_pred cEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHH
Confidence 99999998775410000000000000000000 0000000 0001112334557799999999999
Q ss_pred CCceEEeEEEEEee
Q 036911 269 EGSFNIRRFDIHTV 282 (359)
Q Consensus 269 ~Gsf~i~~~e~~~~ 282 (359)
.| |++..++.+..
T Consensus 264 aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 264 SG-FDVIAQTPFAS 276 (299)
T ss_dssp TT-CEEEEEEEECT
T ss_pred CC-CEEEEEEecCC
Confidence 99 99999887753
No 64
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.97 E-value=1.6e-08 Score=95.29 Aligned_cols=176 Identities=15% Similarity=0.208 Sum_probs=104.1
Q ss_pred HHHHHHHHHHhhhcCCCCcceEEeecCCC--CcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhccc
Q 036911 33 KPILQDSIKKLYCNRLPECLKIADLGCSS--GPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLP 110 (359)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaDlGCs~--G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~ 110 (359)
...+..+++-+.. ....-+|+|+|||+ |.|+..+++.+ .|+.+|+..|.. |
T Consensus 63 r~fl~rav~~l~~--~~g~~q~LDLGcG~pT~~~~~~la~~~--------------~P~arVv~VD~s-----------p 115 (277)
T 3giw_A 63 RDWMNRAVAHLAK--EAGIRQFLDIGTGIPTSPNLHEIAQSV--------------APESRVVYVDND-----------P 115 (277)
T ss_dssp HHHHHHHHHHHHH--TSCCCEEEEESCCSCCSSCHHHHHHHH--------------CTTCEEEEEECC-----------H
T ss_pred HHHHHHHHHHhcc--ccCCCEEEEeCCCCCcccHHHHHHHHH--------------CCCCEEEEEeCC-----------h
Confidence 3444444443321 12457999999998 77888777544 267899999963 1
Q ss_pred chHHHHHHhhCCCC--CCeEEecccCCcccC--CC--C--CCcee-----EEEecccccccccCCCCccccCCCCCCCcc
Q 036911 111 GFYEKLKEVKGSNF--GPCFIAGIPGSFYGR--LF--P--NKSLH-----FVHSSYSLHWLSQVPEGLVSESGVPLNKGH 177 (359)
Q Consensus 111 ~~~~~~~~~~~~~~--~~~f~~~v~gsFy~~--lf--p--~~S~d-----~~~S~~alhWls~~p~~~~~~~~~~~n~g~ 177 (359)
......+....... +..|+. +++... ++ | .+++| .++|+.+||||.+..
T Consensus 116 ~mLa~Ar~~l~~~~~~~~~~v~---aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~--------------- 177 (277)
T 3giw_A 116 IVLTLSQGLLASTPEGRTAYVE---ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED--------------- 177 (277)
T ss_dssp HHHHTTHHHHCCCSSSEEEEEE---CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG---------------
T ss_pred HHHHHHHHHhccCCCCcEEEEE---ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh---------------
Confidence 22221122111110 123544 455432 01 1 34555 588999999987631
Q ss_pred eeecCCCCccccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCC
Q 036911 178 ICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAP 257 (359)
Q Consensus 178 i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~ 257 (359)
+....|+.-.+.|+|||+|+++.++.+. . + ...+.+.+.+ ..-..|+.++
T Consensus 178 -----------~p~~~l~~l~~~L~PGG~Lvls~~~~d~--~-p--~~~~~~~~~~--------------~~~g~p~~~r 227 (277)
T 3giw_A 178 -----------DAVGIVRRLLEPLPSGSYLAMSIGTAEF--A-P--QEVGRVAREY--------------AARNMPMRLR 227 (277)
T ss_dssp -----------CHHHHHHHHHTTSCTTCEEEEEEECCTT--S-H--HHHHHHHHHH--------------HHTTCCCCCC
T ss_pred -----------hHHHHHHHHHHhCCCCcEEEEEeccCCC--C-H--HHHHHHHHHH--------------HhcCCCCccC
Confidence 1234677778999999999999998764 1 1 1111111111 1124488999
Q ss_pred CHHHHHHHHhcCCceEEeEEEEEe-ecCCC
Q 036911 258 SPEEVRHVIQTEGSFNIRRFDIHT-VDWDA 286 (359)
Q Consensus 258 s~~E~~~~i~~~Gsf~i~~~e~~~-~~~~~ 286 (359)
|.+|+.+.++ | |++..--... ..|.+
T Consensus 228 s~~ei~~~f~--G-lelvePG~v~~~~Wrp 254 (277)
T 3giw_A 228 THAEAEEFFE--G-LELVEPGIVQVHKWHP 254 (277)
T ss_dssp CHHHHHHTTT--T-SEECTTCSEEGGGSSC
T ss_pred CHHHHHHHhC--C-CcccCCcEeecccccC
Confidence 9999999995 7 8876654444 34766
No 65
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.96 E-value=1.5e-08 Score=98.41 Aligned_cols=154 Identities=18% Similarity=0.169 Sum_probs=98.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC-CCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS-NFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~-~~~~~f 128 (359)
...+|+|+|||+|..+..++ +++ |...++.-|+|. ..+..++.... ...+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~--------~~~-------p~~~~~~~dlp~------------v~~~a~~~~~~~~~~r-- 229 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECM--------SLY-------PGCKITVFDIPE------------VVWTAKQHFSFQEEEQ-- 229 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHH--------HHC-------SSCEEEEEECHH------------HHHHHHHHSCC--CCS--
T ss_pred cCCeEEeeCCCCCHHHHHHH--------HhC-------CCceeEeccCHH------------HHHHHHHhhhhcccCc--
Confidence 45699999999999888887 443 678889899872 11112211110 0122
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+..++|||++..+| ..|+++....||-.++ ++...+|+..++.|+|||+++
T Consensus 230 v~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d---------------------------~~~~~iL~~~~~al~pgg~ll 280 (353)
T 4a6d_A 230 IDFQEGDFFKDPLP--EADLYILARVLHDWAD---------------------------GKCSHLLERIYHTCKPGGGIL 280 (353)
T ss_dssp EEEEESCTTTSCCC--CCSEEEEESSGGGSCH---------------------------HHHHHHHHHHHHHCCTTCEEE
T ss_pred eeeecCccccCCCC--CceEEEeeeecccCCH---------------------------HHHHHHHHHHHhhCCCCCEEE
Confidence 33457899987555 4599999999994332 233458999999999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+.-...++.+..+ ....+-+ +.=|+. ..--.+|.+|+++++++.| |++.++..
T Consensus 281 i~e~~~~~~~~~~---~~~~~~d-l~ml~~-------------~~g~ert~~e~~~ll~~AG-f~~v~v~~ 333 (353)
T 4a6d_A 281 VIESLLDEDRRGP---LLTQLYS-LNMLVQ-------------TEGQERTPTHYHMLLSSAG-FRDFQFKK 333 (353)
T ss_dssp EEECCCCTTSCCC---HHHHHHH-HHHHHS-------------SSCCCCCHHHHHHHHHHHT-CEEEEEEC
T ss_pred EEEeeeCCCCCCC---HHHHHHH-HHHHHh-------------CCCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 9876554421222 1111111 111211 1113479999999999999 99877653
No 66
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.95 E-value=4.2e-09 Score=99.61 Aligned_cols=162 Identities=11% Similarity=0.053 Sum_probs=100.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh---CCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK---GSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~---~~~~~ 125 (359)
+...+|+|+|||+|..+..++.. ..|..+++..|+.. ......+... +...+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~--------------~~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~ 171 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYS--------------ACPGVQLVGIDYDP-----------EALDGATRLAAGHALAGQ 171 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCT--------------TCTTCEEEEEESCH-----------HHHHHHHHHHTTSTTGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHh--------------cCCCCeEEEEECCH-----------HHHHHHHHHHHhcCCCCc
Confidence 34689999999999988766310 13568999999742 2222222211 11101
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.| +.+++....++ +++|+|+++.++|++.+.. ....||+.-.+-|+|||
T Consensus 172 v~~---~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~--------------------------~~~~~l~~~~~~LkpgG 221 (305)
T 3ocj_A 172 ITL---HRQDAWKLDTR-EGYDLLTSNGLNIYEPDDA--------------------------RVTELYRRFWQALKPGG 221 (305)
T ss_dssp EEE---EECCGGGCCCC-SCEEEEECCSSGGGCCCHH--------------------------HHHHHHHHHHHHEEEEE
T ss_pred eEE---EECchhcCCcc-CCeEEEEECChhhhcCCHH--------------------------HHHHHHHHHHHhcCCCe
Confidence 123 34688777777 9999999999999965521 22347888899999999
Q ss_pred eEEEEEecCCCCCCCCchhH--------HHHHHHHHHHHHHhccchhhhhccCCcCc-cCCCHHHHHHHHhcCCceEEeE
Q 036911 206 HVLLSIIGNDRKPGDPRCTG--------WELLGVTLNDMVLEGLVEEAKVDWFNLPY-YAPSPEEVRHVIQTEGSFNIRR 276 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~--------~~~l~~al~~mv~eGli~~e~~d~f~~P~-y~~s~~E~~~~i~~~Gsf~i~~ 276 (359)
+++++.+++........... .......+.+ + ....+ .+++.+++.+.+++.| |++.+
T Consensus 222 ~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~~~~~l~~aG-F~~v~ 287 (305)
T 3ocj_A 222 ALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTR----L---------IQPRWNALRTHAQTRAQLEEAG-FTDLR 287 (305)
T ss_dssp EEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHH----T---------TCCSCCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEecCCCCcccccccceeeccccchhhhhhhHHHH----H---------HhhhhhccCCHHHHHHHHHHCC-CEEEE
Confidence 99999987765211110000 0001111111 1 01111 4579999999999999 99988
Q ss_pred EEE
Q 036911 277 FDI 279 (359)
Q Consensus 277 ~e~ 279 (359)
++.
T Consensus 288 ~~~ 290 (305)
T 3ocj_A 288 FED 290 (305)
T ss_dssp EEC
T ss_pred EEc
Confidence 775
No 67
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.95 E-value=1.2e-08 Score=90.50 Aligned_cols=134 Identities=13% Similarity=0.150 Sum_probs=86.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcc-eEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMY-QVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~-~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
...+|+|+|||+|..+..+ .. +++..|+.. ......++.. .+..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l--------------------~~~~v~~vD~s~-----------~~~~~a~~~~---~~~~~ 81 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL--------------------PYPQKVGVEPSE-----------AMLAVGRRRA---PEATW 81 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC--------------------CCSEEEEECCCH-----------HHHHHHHHHC---TTSEE
T ss_pred CCCeEEEECCCCCHhHHhC--------------------CCCeEEEEeCCH-----------HHHHHHHHhC---CCcEE
Confidence 4679999999999876544 13 778888642 1212222211 12233
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+ .+++....++++++|+|+++.++||+.+.. .+|+.-.+-|+|||+++
T Consensus 82 ~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~L~pgG~l~ 129 (211)
T 2gs9_A 82 V---RAWGEALPFPGESFDVVLLFTTLEFVEDVE-----------------------------RVLLEARRVLRPGGALV 129 (211)
T ss_dssp E---CCCTTSCCSCSSCEEEEEEESCTTTCSCHH-----------------------------HHHHHHHHHEEEEEEEE
T ss_pred E---EcccccCCCCCCcEEEEEEcChhhhcCCHH-----------------------------HHHHHHHHHcCCCCEEE
Confidence 3 356666678889999999999999976422 47888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHh
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQ 267 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~ 267 (359)
++.+.+.+ .|..+ ...+...|. .......+.|.+|++++++
T Consensus 130 i~~~~~~~--------~~~~~---~~~~~~~~~-------~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 130 VGVLEALS--------PWAAL---YRRLGEKGV-------LPWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEEECTTS--------HHHHH---HHHHHHTTC-------TTGGGCCCCCHHHHHHHHC
T ss_pred EEecCCcC--------cHHHH---HHHHhhccC-------ccccccccCCHHHHHHHhc
Confidence 99987755 23221 111111221 1111235679999999998
No 68
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.95 E-value=4.4e-09 Score=94.04 Aligned_cols=150 Identities=12% Similarity=0.036 Sum_probs=88.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC-CCC----
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG-SNF---- 124 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~-~~~---- 124 (359)
...+|+|+|||+|..+..+. +. .+..+++..|+.. ......++... ...
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~ 82 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILL--------KD-------SFFEQITGVDVSY-----------RSLEIAQERLDRLRLPRNQ 82 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHH--------HC-------TTCSEEEEEESCH-----------HHHHHHHHHHTTCCCCHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------hh-------CCCCEEEEEECCH-----------HHHHHHHHHHHHhcCCccc
Confidence 35799999999999988776 22 1446889999742 11121221111 000
Q ss_pred --CCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 125 --GPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 125 --~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
+-.|+. +++....++.+++|+|+++.++||+.+ .++..+|+...+-|+
T Consensus 83 ~~~v~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~Lk 132 (217)
T 3jwh_A 83 WERLQLIQ---GALTYQDKRFHGYDAATVIEVIEHLDL---------------------------SRLGAFERVLFEFAQ 132 (217)
T ss_dssp HTTEEEEE---CCTTSCCGGGCSCSEEEEESCGGGCCH---------------------------HHHHHHHHHHHTTTC
T ss_pred CcceEEEe---CCcccccccCCCcCEEeeHHHHHcCCH---------------------------HHHHHHHHHHHHHcC
Confidence 122333 466555566789999999999999743 134458989999999
Q ss_pred cCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHH----HHHhcCCceEEeEE
Q 036911 203 SGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVR----HVIQTEGSFNIRRF 277 (359)
Q Consensus 203 pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~----~~i~~~Gsf~i~~~ 277 (359)
|||+++++....-+ ..+..+.... . ...-..+..+.+|++ .++++.| |+|...
T Consensus 133 pgG~li~~~~~~~~--------------~~~~~~~~~~------~-~~~~~~~~~~~~~l~~~~~~~~~~~G-f~v~~~ 189 (217)
T 3jwh_A 133 PKIVIVTTPNIEYN--------------VKFANLPAGK------L-RHKDHRFEWTRSQFQNWANKITERFA-YNVQFQ 189 (217)
T ss_dssp CSEEEEEEEBHHHH--------------HHTC------------------CCSCBCHHHHHHHHHHHHHHSS-EEEEEC
T ss_pred CCEEEEEccCcccc--------------hhhccccccc------c-cccccccccCHHHHHHHHHHHHHHcC-ceEEEE
Confidence 99966655432111 1111111000 0 011233556899999 7777888 887544
No 69
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.94 E-value=1.4e-08 Score=96.77 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=97.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
....+|+|+|||+|..+..+++ .+ |..+++..|++ . .-... ..... ..+...+-.|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~--------~~-------p~~~~~~~D~~-~-~~~~a------~~~~~-~~~~~~~v~~ 219 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQ--------HN-------PNAEIFGVDWA-S-VLEVA------KENAR-IQGVASRYHT 219 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHH--------HC-------TTCEEEEEECH-H-HHHHH------HHHHH-HHTCGGGEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHH--------HC-------CCCeEEEEecH-H-HHHHH------HHHHH-hcCCCcceEE
Confidence 3468999999999998887763 21 45789999985 2 11111 11111 1111101123
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+.+++....+|++ +|++++...+|.+++ .+...+|+.-++-|+|||+++
T Consensus 220 ---~~~d~~~~~~~~~-~D~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~ 268 (335)
T 2r3s_A 220 ---IAGSAFEVDYGND-YDLVLLPNFLHHFDV---------------------------ATCEQLLRKIKTALAVEGKVI 268 (335)
T ss_dssp ---EESCTTTSCCCSC-EEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred ---EecccccCCCCCC-CcEEEEcchhccCCH---------------------------HHHHHHHHHHHHhCCCCcEEE
Confidence 3468876556654 999999999997532 234468888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+.-...++....+ .+..+.+.+ -|... .....++.+|+++++++.| |++.++..
T Consensus 269 i~e~~~~~~~~~~---~~~~~~~~~-~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~~~ 322 (335)
T 2r3s_A 269 VFDFIPNSDRITP---PDAAAFSLV-MLATT------------PNGDAYTFAEYESMFSNAG-FSHSQLHS 322 (335)
T ss_dssp EEECCCCTTSSCS---HHHHHHHHH-HHHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEEEC
T ss_pred EEeecCCCCcCCc---hHHHHHHHH-HHeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeEEE
Confidence 9887665421111 111111111 11110 0124579999999999999 99877643
No 70
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.93 E-value=7.1e-10 Score=109.44 Aligned_cols=146 Identities=14% Similarity=0.126 Sum_probs=94.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCC-CeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFG-PCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~-~~f 128 (359)
...+|+|+|||+|..+..+. ++ ..+++..|+..+ ..+..++ .+.... ..|
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~~---------g~~v~gvD~s~~-----------~~~~a~~-~~~~~~~~~~ 157 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------EA---------GVRHLGFEPSSG-----------VAAKARE-KGIRVRTDFF 157 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HT---------TCEEEEECCCHH-----------HHHHHHT-TTCCEECSCC
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCcEEEECCCHH-----------HHHHHHH-cCCCcceeee
Confidence 45799999999999888775 21 258888897421 1111111 111000 011
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
.. ++.....++++++|+|+|+.+|||+.+. ..||+.-++-|+|||+|+
T Consensus 158 ~~---~~~~~l~~~~~~fD~I~~~~vl~h~~d~-----------------------------~~~l~~~~r~LkpgG~l~ 205 (416)
T 4e2x_A 158 EK---ATADDVRRTEGPANVIYAANTLCHIPYV-----------------------------QSVLEGVDALLAPDGVFV 205 (416)
T ss_dssp SH---HHHHHHHHHHCCEEEEEEESCGGGCTTH-----------------------------HHHHHHHHHHEEEEEEEE
T ss_pred ch---hhHhhcccCCCCEEEEEECChHHhcCCH-----------------------------HHHHHHHHHHcCCCeEEE
Confidence 11 1222334678999999999999997542 248999999999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccC-CcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWF-NLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f-~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+......+ +.. ...++.+ .-.+.+++.++++.++++.| |++..++.+.
T Consensus 206 i~~~~~~~-------------------~~~-----~~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 206 FEDPYLGD-------------------IVA-----KTSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp EEEECHHH-------------------HHH-----HTCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred EEeCChHH-------------------hhh-----hcchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 98754322 111 1112211 23456789999999999999 9998888764
No 71
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.93 E-value=8.8e-09 Score=92.03 Aligned_cols=152 Identities=15% Similarity=0.098 Sum_probs=90.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh---CCC---
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK---GSN--- 123 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~---~~~--- 123 (359)
...+|+|+|||+|..+..+. +. .|..+++..|+.. ......++.. +..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~~ 82 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLL--------KD-------KSFEQITGVDVSY-----------SVLERAKDRLKIDRLPEMQ 82 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHH--------TS-------TTCCEEEEEESCH-----------HHHHHHHHHHTGGGSCHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------hc-------CCCCEEEEEECCH-----------HHHHHHHHHHHhhcccccc
Confidence 35799999999999888776 22 1447899999742 1111111111 000
Q ss_pred -CCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 124 -FGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 124 -~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.+-.|+. +++....++++++|+|+++.++||+++ | ++..+|+.-++-|+
T Consensus 83 ~~~v~~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~~-~--------------------------~~~~~l~~~~~~Lk 132 (219)
T 3jwg_A 83 RKRISLFQ---SSLVYRDKRFSGYDAATVIEVIEHLDE-N--------------------------RLQAFEKVLFEFTR 132 (219)
T ss_dssp HTTEEEEE---CCSSSCCGGGTTCSEEEEESCGGGCCH-H--------------------------HHHHHHHHHHTTTC
T ss_pred CcceEEEe---CcccccccccCCCCEEEEHHHHHhCCH-H--------------------------HHHHHHHHHHHhhC
Confidence 0123333 566566667889999999999999743 1 23458889999999
Q ss_pred cCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHH----HHHhcCCceEEeEEE
Q 036911 203 SGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVR----HVIQTEGSFNIRRFD 278 (359)
Q Consensus 203 pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~----~~i~~~Gsf~i~~~e 278 (359)
|||+++.+.....+ . .|. . +..... ...-..++.+.+|++ .++++.| |+|+...
T Consensus 133 pgG~~i~~~~~~~~--~-----~~~-------~------~~~~~~-~~~~~~~~~~~~~l~~~~~~l~~~~G-f~v~~~~ 190 (219)
T 3jwg_A 133 PQTVIVSTPNKEYN--F-----HYG-------N------LFEGNL-RHRDHRFEWTRKEFQTWAVKVAEKYG-YSVRFLQ 190 (219)
T ss_dssp CSEEEEEEEBGGGG--G-----CCC-------C------T------GGGCCTTSBCHHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred CCEEEEEccchhhh--h-----hhc-------c------cCcccc-cccCceeeecHHHHHHHHHHHHHHCC-cEEEEEe
Confidence 99966554432221 0 000 0 000000 011223456899999 6677788 9886654
Q ss_pred E
Q 036911 279 I 279 (359)
Q Consensus 279 ~ 279 (359)
.
T Consensus 191 ~ 191 (219)
T 3jwg_A 191 I 191 (219)
T ss_dssp E
T ss_pred c
Confidence 3
No 72
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.93 E-value=4.9e-09 Score=92.39 Aligned_cols=141 Identities=16% Similarity=0.064 Sum_probs=95.0
Q ss_pred eEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCCeEE
Q 036911 53 KIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGPCFI 129 (359)
Q Consensus 53 ~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~~f~ 129 (359)
+|+|+|||+|..+..+. +. ..+++..|+.. ......++. .+. +..|
T Consensus 32 ~vLdiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~--~~~~- 80 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--------SL---------GYEVTAVDQSS-----------VGLAKAKQLAQEKGV--KITT- 80 (202)
T ss_dssp EEEECCCSCTHHHHHHH--------TT---------TCEEEEECSSH-----------HHHHHHHHHHHHHTC--CEEE-
T ss_pred CEEEECCCCCHhHHHHH--------hC---------CCeEEEEECCH-----------HHHHHHHHHHHhcCC--ceEE-
Confidence 99999999999987765 11 25788888742 111111111 111 1223
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++....++++++|+|+++. .|| + ..+...+|+.-.+-|+|||++++
T Consensus 81 --~~~d~~~~~~~~~~fD~v~~~~-~~~----~------------------------~~~~~~~l~~~~~~L~pgG~l~~ 129 (202)
T 2kw5_A 81 --VQSNLADFDIVADAWEGIVSIF-CHL----P------------------------SSLRQQLYPKVYQGLKPGGVFIL 129 (202)
T ss_dssp --ECCBTTTBSCCTTTCSEEEEEC-CCC----C------------------------HHHHHHHHHHHHTTCCSSEEEEE
T ss_pred --EEcChhhcCCCcCCccEEEEEh-hcC----C------------------------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 3457766677889999999954 454 1 12345688888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecC
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDW 284 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~ 284 (359)
..+...+ . . .+ ......+.++.+++|++++++ | |+|..++....+.
T Consensus 130 ~~~~~~~--~----~--------------~~------~~~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~~ 175 (202)
T 2kw5_A 130 EGFAPEQ--L----Q--------------YN------TGGPKDLDLLPKLETLQSELP--S-LNWLIANNLERNL 175 (202)
T ss_dssp EEECTTT--G----G--------------GT------SCCSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEEC
T ss_pred EEecccc--c----c--------------CC------CCCCCcceeecCHHHHHHHhc--C-ceEEEEEEEEeec
Confidence 9988765 1 0 00 011123578899999999998 7 9999999877664
No 73
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.92 E-value=7.8e-09 Score=88.57 Aligned_cols=132 Identities=14% Similarity=0.135 Sum_probs=90.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. - .+++..|+.. ......++.. .+-.|+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~--------~~--------~-~~v~~vD~s~-----------~~~~~a~~~~---~~v~~~ 65 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLL--------EF--------A-TKLYCIDINV-----------IALKEVKEKF---DSVITL 65 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHH--------TT--------E-EEEEEECSCH-----------HHHHHHHHHC---TTSEEE
T ss_pred CCCeEEEECCCCCHHHHHHH--------hh--------c-CeEEEEeCCH-----------HHHHHHHHhC---CCcEEE
Confidence 45799999999999988776 22 1 3788888741 1112222221 122343
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
. ++ ..++++++|+++++.++|++.+. ..+|+.-.+-|+|||++++
T Consensus 66 ~---~d---~~~~~~~~D~v~~~~~l~~~~~~-----------------------------~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 66 S---DP---KEIPDNSVDFILFANSFHDMDDK-----------------------------QHVISEVKRILKDDGRVII 110 (170)
T ss_dssp S---SG---GGSCTTCEEEEEEESCSTTCSCH-----------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred e---CC---CCCCCCceEEEEEccchhcccCH-----------------------------HHHHHHHHHhcCCCCEEEE
Confidence 3 34 55788999999999999997542 2488888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
..+...+ ... + .......+.++++++++ | |++.+....
T Consensus 111 ~~~~~~~--~~~------------------~----------~~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 111 IDWRKEN--TGI------------------G----------PPLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp EEECSSC--CSS------------------S----------SCGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred EEcCccc--ccc------------------C----------chHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 9887665 100 0 00123468999999998 7 998877643
No 74
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.91 E-value=2.8e-08 Score=96.74 Aligned_cols=150 Identities=17% Similarity=0.193 Sum_probs=95.8
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..++ +++ |..+++.-|+| +.-...+. .+.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~--~~~~~a~~---------------~~~-- 253 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELII--------SKY-------PLIKGINFDLP--QVIENAPP---------------LSG-- 253 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH--HHHTTCCC---------------CTT--
T ss_pred CCCCEEEEeCCCCcHHHHHHH--------HHC-------CCCeEEEeChH--HHHHhhhh---------------cCC--
Confidence 346899999999999988887 332 55788888974 11111000 012
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+..+.++|++ .+|. +|+++++.+||++++. +...+|+.-++-|+|||+++
T Consensus 254 v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~---------------------------~~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 254 IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDE---------------------------KCIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp EEEEECCTTT-CCCC--EEEEEEESSGGGSCHH---------------------------HHHHHHHHHHHHEEEEEEEE
T ss_pred CEEEeCCccc-CCCC--CCEEEEecccccCCHH---------------------------HHHHHHHHHHHhcCCCCEEE
Confidence 2334578887 5665 9999999999975541 22358999999999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHH---HhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMV---LEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv---~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+.-+..++....+ ..+.. ..+.++. ..| -..++.+|+++++++.| |++.++...
T Consensus 304 i~e~~~~~~~~~~---~~~~~-~~~~d~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 360 (372)
T 1fp1_D 304 IVEFILPEEPNTS---EESKL-VSTLDNLMFITVG-------------GRERTEKQYEKLSKLSG-FSKFQVACR 360 (372)
T ss_dssp EEEEEECSSCCSS---HHHHH-HHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-CSEEEEEEE
T ss_pred EEEeccCCCCccc---hHHHH-HHHhhHHHHhccC-------------CccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 9866554411111 11100 1122211 111 13458999999999999 998777653
No 75
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.90 E-value=9.8e-09 Score=97.77 Aligned_cols=163 Identities=13% Similarity=0.203 Sum_probs=97.5
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCC-
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNF- 124 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~- 124 (359)
+...+|+|+|||+|..+..++ .. ...+|+..|+.. ...+..+.. .+...
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~--------~~--------~~~~v~GiD~S~-----------~~l~~A~~~~~~~~~~~~ 99 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYF--------YG--------EIALLVATDPDA-----------DAIARGNERYNKLNSGIK 99 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHH--------HT--------TCSEEEEEESCH-----------HHHHHHHHHHHHHCC---
T ss_pred CCCCeEEEEecCCcHhHHHHH--------hc--------CCCeEEEEECCH-----------HHHHHHHHHHHhcccccc
Confidence 346799999999998766543 11 126889999853 121212211 11100
Q ss_pred ----CCeEEec-ccCCcc-c---CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHH
Q 036911 125 ----GPCFIAG-IPGSFY-G---RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLT 195 (359)
Q Consensus 125 ----~~~f~~~-v~gsFy-~---~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~ 195 (359)
..-|..+ +.++-+ . ..+|++++|+|+|..++||+-+.+. ...+|+
T Consensus 100 ~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~--------------------------~~~~l~ 153 (302)
T 2vdw_A 100 TKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH--------------------------YATVMN 153 (302)
T ss_dssp -CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT--------------------------HHHHHH
T ss_pred ccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHH--------------------------HHHHHH
Confidence 0013332 323332 1 2467899999999999999754331 235899
Q ss_pred HHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHH-------------hcc-----chhhhh-------ccC
Q 036911 196 SRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVL-------------EGL-----VEEAKV-------DWF 250 (359)
Q Consensus 196 ~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~-------------eGl-----i~~e~~-------d~f 250 (359)
.-++-|+|||+|+++++.+... ..+.. +.. ++.+.+ ..-
T Consensus 154 ~~~r~LkpGG~~i~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (302)
T 2vdw_A 154 NLSELTASGGKVLITTMDGDKL----------------SKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMST 217 (302)
T ss_dssp HHHHHEEEEEEEEEEEECHHHH----------------TTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSS
T ss_pred HHHHHcCCCCEEEEEeCCHHHH----------------HHHHhcCCcccccccccccceeeeccccccccceeeccccCC
Confidence 9999999999999998754320 00000 000 000000 012
Q ss_pred CcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 251 NLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 251 ~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
..|-|+-+++|+.+++++.| |++.....+.
T Consensus 218 ~~~e~~v~~~el~~l~~~~G-l~lv~~~~f~ 247 (302)
T 2vdw_A 218 PMTEYIIKKNDIVRVFNEYG-FVLVDNVDFA 247 (302)
T ss_dssp CEEEECCCHHHHHHHHHHTT-EEEEEEEEHH
T ss_pred CceeeeeEHHHHHHHHHHCC-CEEEEecChH
Confidence 34557788899999999999 9988776554
No 76
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.88 E-value=1.9e-08 Score=97.50 Aligned_cols=158 Identities=16% Similarity=0.135 Sum_probs=94.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++ .+ |..+++..|+| +. +........ ..+...+-.|
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~--------~~-------~~~~~~~~D~~--~~------~~~a~~~~~-~~~~~~~v~~- 236 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIAL--------RA-------PHLRGTLVELA--GP------AERARRRFA-DAGLADRVTV- 236 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHH--------HC-------TTCEEEEEECH--HH------HHHHHHHHH-HTTCTTTEEE-
T ss_pred CCCEEEEECCCcCHHHHHHHH--------HC-------CCCEEEEEeCH--HH------HHHHHHHHH-hcCCCCceEE-
Confidence 467999999999998887763 22 45788988973 11 110111111 1121111223
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++.+ .+|.+ +|+++++..+|++++ .+...+|+.-.+-|+|||++++
T Consensus 237 --~~~d~~~-~~~~~-~D~v~~~~vl~~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~i 285 (374)
T 1qzz_A 237 --AEGDFFK-PLPVT-ADVVLLSFVLLNWSD---------------------------EDALTILRGCVRALEPGGRLLV 285 (374)
T ss_dssp --EECCTTS-CCSCC-EEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred --EeCCCCC-cCCCC-CCEEEEeccccCCCH---------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 3468775 45654 999999999987443 1223588888999999999998
Q ss_pred EEe--cCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEee
Q 036911 210 SII--GNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTV 282 (359)
Q Consensus 210 ~~~--g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~ 282 (359)
.-. ..++ . . ...+..+.+... ++..| ...++.+|+++++++.| |++.++.....
T Consensus 286 ~e~~~~~~~--~-~-~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~~~~~~~ 341 (374)
T 1qzz_A 286 LDRADVEGD--G-A-DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALASERTSGS 341 (374)
T ss_dssp EECCH-----------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEEEEECC
T ss_pred EechhhcCC--C-C-CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEEECCC
Confidence 876 4332 1 0 111111111111 11111 24579999999999999 99988876543
No 77
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.88 E-value=2.6e-08 Score=96.36 Aligned_cols=159 Identities=18% Similarity=0.227 Sum_probs=98.9
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+++. + |..+++..|+|. . +......+. ..+.. ..+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~--------~-------p~~~~~~~D~~~--~------~~~a~~~~~-~~~~~-~~v- 242 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKH--------F-------PELDSTILNLPG--A------IDLVNENAA-EKGVA-DRM- 242 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHH--------C-------TTCEEEEEECGG--G------HHHHHHHHH-HTTCT-TTE-
T ss_pred CCCCEEEEECCcccHHHHHHHHH--------C-------CCCeEEEEecHH--H------HHHHHHHHH-hcCCC-CCE-
Confidence 34679999999999998888732 2 557889999841 1 111111111 11211 112
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
..+.+++....+|+. |+++++..+|.+++ ++...+|+.-++-|+|||+++
T Consensus 243 -~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d---------------------------~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 243 -RGIAVDIYKESYPEA--DAVLFCRILYSANE---------------------------QLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp -EEEECCTTTSCCCCC--SEEEEESCGGGSCH---------------------------HHHHHHHHHHHTTCCTTCEEE
T ss_pred -EEEeCccccCCCCCC--CEEEEechhccCCH---------------------------HHHHHHHHHHHHhcCCCCEEE
Confidence 224478887766655 99999999985332 124468999999999999998
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHH-hccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVL-EGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+.-...++. ..+ .+..+ + .|.. .| .-.....+++.+|+++++++.| |++.++...
T Consensus 293 i~e~~~~~~-~~~---~~~~~---~-~~~~~~~--------~g~~~~~~~t~~e~~~ll~~aG-f~~v~~~~~ 348 (359)
T 1x19_A 293 ILDMVIDDP-ENP---NFDYL---S-HYILGAG--------MPFSVLGFKEQARYKEILESLG-YKDVTMVRK 348 (359)
T ss_dssp EEEECCCCT-TSC---CHHHH---H-HHGGGGG--------SSCCCCCCCCGGGHHHHHHHHT-CEEEEEEEE
T ss_pred EEecccCCC-CCc---hHHHH---H-HHHHhcC--------CCCcccCCCCHHHHHHHHHHCC-CceEEEEec
Confidence 887766541 112 11111 1 2211 11 0011234589999999999999 998777654
No 78
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.87 E-value=2.9e-08 Score=89.29 Aligned_cols=107 Identities=16% Similarity=0.187 Sum_probs=70.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+.+.. .+++..|+.. ......++... +-.+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~-----------------~~v~~~D~s~-----------~~~~~a~~~~~---~~~~ 87 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF-----------------GDTAGLELSE-----------DMLTHARKRLP---DATL 87 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH-----------------SEEEEEESCH-----------HHHHHHHHHCT---TCEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC-----------------CcEEEEeCCH-----------HHHHHHHHhCC---CCEE
Confidence 346799999999999988776332 2677778631 12222222111 1233
Q ss_pred EecccCCcccCCCCCCceeEEEe-cccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHS-SYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S-~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+. +++....+ ++++|+|+| ..++||+... .++..+|+.-++-|+|||++
T Consensus 88 ~~---~d~~~~~~-~~~~D~v~~~~~~~~~~~~~--------------------------~~~~~~l~~~~~~L~pgG~l 137 (239)
T 3bxo_A 88 HQ---GDMRDFRL-GRKFSAVVSMFSSVGYLKTT--------------------------EELGAAVASFAEHLEPGGVV 137 (239)
T ss_dssp EE---CCTTTCCC-SSCEEEEEECTTGGGGCCSH--------------------------HHHHHHHHHHHHTEEEEEEE
T ss_pred EE---CCHHHccc-CCCCcEEEEcCchHhhcCCH--------------------------HHHHHHHHHHHHhcCCCeEE
Confidence 33 56655444 689999995 5599997542 24456899999999999999
Q ss_pred EEEEecCCC
Q 036911 208 LLSIIGNDR 216 (359)
Q Consensus 208 ~~~~~g~~~ 216 (359)
++......+
T Consensus 138 ~~~~~~~~~ 146 (239)
T 3bxo_A 138 VVEPWWFPE 146 (239)
T ss_dssp EECCCCCTT
T ss_pred EEEeccCcc
Confidence 998765543
No 79
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.86 E-value=4.8e-08 Score=93.28 Aligned_cols=152 Identities=16% Similarity=0.112 Sum_probs=94.3
Q ss_pred ceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEec
Q 036911 52 LKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAG 131 (359)
Q Consensus 52 ~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~ 131 (359)
.+|+|+|||+|..+..++ +++ |..+++..|+|. . +......... .+.. .++ ..
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~--~------~~~a~~~~~~-~~~~-~~v--~~ 221 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------QAE-------PSARGVMLDREG--S------LGVARDNLSS-LLAG-ERV--SL 221 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECTT--C------THHHHHHTHH-HHHT-TSE--EE
T ss_pred CEEEEeCCCchHHHHHHH--------HHC-------CCCEEEEeCcHH--H------HHHHHHHHhh-cCCC-CcE--EE
Confidence 899999999999888776 322 557899999852 1 1111111111 1100 112 23
Q ss_pred ccCCcccCCCCCCceeEEEeccccc-ccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 132 IPGSFYGRLFPNKSLHFVHSSYSLH-WLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 132 v~gsFy~~lfp~~S~d~~~S~~alh-Wls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
+.++|.+ .+| +++|++++...+| | ++ .+...+|+.-++-|+|||++++.
T Consensus 222 ~~~d~~~-~~~-~~~D~v~~~~vl~~~-~~---------------------------~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 222 VGGDMLQ-EVP-SNGDIYLLSRIIGDL-DE---------------------------AASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp EESCTTT-CCC-SSCSEEEEESCGGGC-CH---------------------------HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ecCCCCC-CCC-CCCCEEEEchhccCC-CH---------------------------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 4578877 456 7899999999998 6 21 12235888889999999999999
Q ss_pred EecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 211 IIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 211 ~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
-...++. ..+ .+..+.+ +.-|...+ -..++.+|+++++++.| |++.++..
T Consensus 272 e~~~~~~-~~~---~~~~~~~-~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 321 (334)
T 2ip2_A 272 ERTISAS-EPS---PMSVLWD-VHLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVD 321 (334)
T ss_dssp ECCBCSS-SCC---HHHHHHH-HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred EeccCCC-CCc---chhHHhh-hHhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEE
Confidence 7765541 111 1111111 11111111 13468999999999999 99877654
No 80
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.84 E-value=3.6e-08 Score=92.21 Aligned_cols=161 Identities=11% Similarity=-0.022 Sum_probs=94.8
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
..+.+|+|+|||+|..+..++ +.+ ++..+++..|+.. ......++.......+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~~~------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~-- 73 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLM--------PLL------PEGSKYTGIDSGE-----------TLLAEARELFRLLPYD-- 73 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------TTS------CTTCEEEEEESCH-----------HHHHHHHHHHHSSSSE--
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC------CCCCEEEEEECCH-----------HHHHHHHHHHHhcCCc--
Confidence 347899999999999888776 221 1237899999742 1212222211111011
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+..+.+++.+..+ ++++|+|++..++|++.+.+ .+|+.-.+-|+|||+++
T Consensus 74 v~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~~~~-----------------------------~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 74 SEFLEGDATEIEL-NDKYDIAICHAFLLHMTTPE-----------------------------TMLQKMIHSVKKGGKII 123 (284)
T ss_dssp EEEEESCTTTCCC-SSCEEEEEEESCGGGCSSHH-----------------------------HHHHHHHHTEEEEEEEE
T ss_pred eEEEEcchhhcCc-CCCeeEEEECChhhcCCCHH-----------------------------HHHHHHHHHcCCCCEEE
Confidence 2223367766555 57999999999999975532 48888899999999999
Q ss_pred EEEecCC-----CCCCCCc---hhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 209 LSIIGND-----RKPGDPR---CTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 209 ~~~~g~~-----~~~~~~~---~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+..+... -...+.. ......+...+.+... .. ...+++.+++.+++++.| |+......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~~l~~~l~~aG-F~~v~~~~ 189 (284)
T 3gu3_A 124 CFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQ----------RN--GKDGNIGMKIPIYLSELG-VKNIECRV 189 (284)
T ss_dssp EEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHH----------HT--CCCTTGGGTHHHHHHHTT-CEEEEEEE
T ss_pred EEecchhcccccceecCcchhhccchHHHHHHHHHHhh----------hh--cccccHHHHHHHHHHHcC-CCeEEEEE
Confidence 8876510 0000000 0011222222222111 11 123455678999999999 98777643
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.84 E-value=1.9e-08 Score=91.95 Aligned_cols=99 Identities=12% Similarity=0.147 Sum_probs=68.6
Q ss_pred cCCcccCC-CCC---CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 133 PGSFYGRL-FPN---KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 133 ~gsFy~~l-fp~---~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
.+++.+.. +++ +++|+|+++.+||++..-. .+...+|+.-++-|+|||+|+
T Consensus 141 ~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~-------------------------~~~~~~l~~~~~~LkpgG~li 195 (265)
T 2i62_A 141 KCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDL-------------------------PAYRTALRNLGSLLKPGGFLV 195 (265)
T ss_dssp ECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSH-------------------------HHHHHHHHHHHTTEEEEEEEE
T ss_pred EeeeccCCCCCccccCCccEEEEhhhhhhhcCCh-------------------------HHHHHHHHHHHhhCCCCcEEE
Confidence 35665433 356 8999999999999654311 234568888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeecC
Q 036911 209 LSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVDW 284 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~~ 284 (359)
+......+ . + ..| ....+.+..+.+++.+++++.| |++..++.....+
T Consensus 196 ~~~~~~~~--~--~---------------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~ 243 (265)
T 2i62_A 196 MVDALKSS--Y--Y---------------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVISQNY 243 (265)
T ss_dssp EEEESSCC--E--E---------------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEECCCC
T ss_pred EEecCCCc--e--E---------------EcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEecccC
Confidence 98854332 0 0 001 1122345678999999999999 9999998876443
No 82
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.83 E-value=2.7e-08 Score=88.63 Aligned_cols=112 Identities=19% Similarity=0.225 Sum_probs=81.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. .+++..|+... ...++
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~--------------------~~v~~~D~s~~------------------------~~~~~ 102 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR--------------------NPVHCFDLASL------------------------DPRVT 102 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC--------------------SCEEEEESSCS------------------------STTEE
T ss_pred CCCeEEEECCcCCHHHHHhh--------------------ccEEEEeCCCC------------------------CceEE
Confidence 45799999999999766441 46677776543 01122
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++....++++++|+|+++.++|| .+ ...+|+.-++-|+|||++++
T Consensus 103 ---~~d~~~~~~~~~~fD~v~~~~~l~~-~~-----------------------------~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 103 ---VCDMAQVPLEDESVDVAVFCLSLMG-TN-----------------------------IRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp ---ESCTTSCSCCTTCEEEEEEESCCCS-SC-----------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred ---EeccccCCCCCCCEeEEEEehhccc-cC-----------------------------HHHHHHHHHHhCCCCeEEEE
Confidence 2455566678899999999999996 22 23478888999999999999
Q ss_pred EEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 210 SIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 210 ~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+.+... +++.+++.+++++.| |++.....
T Consensus 150 ~~~~~~----------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 150 AEVSSR----------------------------------------FEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp EECGGG----------------------------------------CSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred EEcCCC----------------------------------------CCCHHHHHHHHHHCC-CEEEEEec
Confidence 853221 128899999999999 99877553
No 83
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.83 E-value=6.4e-09 Score=95.87 Aligned_cols=156 Identities=15% Similarity=0.182 Sum_probs=94.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. ..+++..|+.. ...+..++... ..++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~l~~a~~~~~----~~~~ 101 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ--------ER---------GFEVVLVDPSK-----------EMLEVAREKGV----KNVV 101 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESCH-----------HHHHHHHHHTC----SCEE
T ss_pred CCCeEEEeCCCcCHHHHHHH--------Hc---------CCeEEEEeCCH-----------HHHHHHHhhcC----CCEE
Confidence 46799999999999988775 11 25788888642 22222222211 1244
Q ss_pred ecccCCcccCCCCCCceeEEEecc-cccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSY-SLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~-alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
. +++....++++++|+|+++. .+||..+ | ..+|+.-++-|+|||+++
T Consensus 102 ~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~----------------------------~~~l~~~~~~LkpgG~l~ 149 (260)
T 2avn_A 102 E---AKAEDLPFPSGAFEAVLALGDVLSYVEN-K----------------------------DKAFSEIRRVLVPDGLLI 149 (260)
T ss_dssp E---CCTTSCCSCTTCEEEEEECSSHHHHCSC-H----------------------------HHHHHHHHHHEEEEEEEE
T ss_pred E---CcHHHCCCCCCCEEEEEEcchhhhcccc-H----------------------------HHHHHHHHHHcCCCeEEE
Confidence 4 56666678889999999976 5677544 2 248888899999999999
Q ss_pred EEEecCCCCCCCCchhHHHHHH----HHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 209 LSIIGNDRKPGDPRCTGWELLG----VTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 209 ~~~~g~~~~~~~~~~~~~~~l~----~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
+..+++.. ...+.+. ..+......|...... ..+.++.++.+++|++++ .| |++.++....
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~ 214 (260)
T 2avn_A 150 ATVDNFYT-------FLQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIG 214 (260)
T ss_dssp EEEEBHHH-------HHHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEEC
T ss_pred EEeCChHH-------HHHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCC
Confidence 99876532 0001000 1112222334322110 001112236789999887 77 9998877553
No 84
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.82 E-value=1.1e-08 Score=91.09 Aligned_cols=107 Identities=11% Similarity=0.134 Sum_probs=72.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. ..+++..|+.. ......+.......+-.|+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 102 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLA--------PH---------CKRLTVIDVMP-----------RAIGRACQRTKRWSHISWA 102 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHG--------GG---------EEEEEEEESCH-----------HHHHHHHHHTTTCSSEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHH--------Hc---------CCEEEEEECCH-----------HHHHHHHHhcccCCCeEEE
Confidence 46899999999999888775 22 15788888742 1222222222111112333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
. +++.+.. |++++|+|+++.++||+.+.+ ++..+|+.-++-|+|||++++
T Consensus 103 ~---~d~~~~~-~~~~fD~v~~~~~l~~~~~~~--------------------------~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 103 A---TDILQFS-TAELFDLIVVAEVLYYLEDMT--------------------------QMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp E---CCTTTCC-CSCCEEEEEEESCGGGSSSHH--------------------------HHHHHHHHHHHTEEEEEEEEE
T ss_pred E---cchhhCC-CCCCccEEEEccHHHhCCCHH--------------------------HHHHHHHHHHHHcCCCCEEEE
Confidence 3 5665544 789999999999999977622 344588899999999999999
Q ss_pred EEecC
Q 036911 210 SIIGN 214 (359)
Q Consensus 210 ~~~g~ 214 (359)
+....
T Consensus 153 ~~~~~ 157 (216)
T 3ofk_A 153 GSARD 157 (216)
T ss_dssp EEECH
T ss_pred EecCC
Confidence 88644
No 85
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.80 E-value=3.7e-08 Score=95.34 Aligned_cols=151 Identities=20% Similarity=0.211 Sum_probs=94.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..++ +++ |..+++.-|+| ..-. ... . .+. +
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~--~~~~---~a~----------~--~~~--v 238 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIH--------EIF-------PHLKCTVFDQP--QVVG---NLT----------G--NEN--L 238 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEEECH--HHHS---SCC----------C--CSS--E
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEeccH--HHHh---hcc----------c--CCC--c
Confidence 35799999999999988887 332 55788888985 1110 000 0 012 3
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc---Cce
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS---GGH 206 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p---GG~ 206 (359)
..+.++|+. .+| ++|+++++..||++++. +...+|+.-++.|+| ||+
T Consensus 239 ~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~---------------------------~~~~~l~~~~~~L~p~~~gG~ 288 (358)
T 1zg3_A 239 NFVGGDMFK-SIP--SADAVLLKWVLHDWNDE---------------------------QSLKILKNSKEAISHKGKDGK 288 (358)
T ss_dssp EEEECCTTT-CCC--CCSEEEEESCGGGSCHH---------------------------HHHHHHHHHHHHTGGGGGGCE
T ss_pred EEEeCccCC-CCC--CceEEEEcccccCCCHH---------------------------HHHHHHHHHHHhCCCCCCCcE
Confidence 335678887 566 49999999999975541 223588899999999 999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+++.-...++....|. +.. ...+.++.--.. ++ -..++.+|+++++++.| |++.++..
T Consensus 289 l~i~e~~~~~~~~~~~---~~~-~~~~~d~~~~~~--------~~--g~~~t~~e~~~ll~~aG-f~~~~~~~ 346 (358)
T 1zg3_A 289 VIIIDISIDETSDDRG---LTE-LQLDYDLVMLTM--------FL--GKERTKQEWEKLIYDAG-FSSYKITP 346 (358)
T ss_dssp EEEEECEECTTCSCHH---HHH-HHHHHHHHHHHH--------HS--CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred EEEEEeccCCCCccch---hhh-HHHhhCHHHhcc--------CC--CCCCCHHHHHHHHHHcC-CCeeEEEe
Confidence 9997765544111110 000 111122110000 00 13469999999999999 99877654
No 86
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.80 E-value=5.3e-08 Score=93.93 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=96.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++ .+ |..+++..|+|. . +........ ..+...+-.|
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~--------~~-------~~~~~~~~D~~~--~------~~~a~~~~~-~~~~~~~v~~- 237 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIAR--------RA-------PHVSATVLEMAG--T------VDTARSYLK-DEGLSDRVDV- 237 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------HC-------TTCEEEEEECTT--H------HHHHHHHHH-HTTCTTTEEE-
T ss_pred cCcEEEEeCCcCcHHHHHHHH--------hC-------CCCEEEEecCHH--H------HHHHHHHHH-hcCCCCceEE-
Confidence 467999999999999887763 21 458888889841 1 111111111 1121112223
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++.+ .+|. .+|+++++..+|.+++ .+...+|+.-++-|+|||++++
T Consensus 238 --~~~d~~~-~~~~-~~D~v~~~~vl~~~~~---------------------------~~~~~~l~~~~~~L~pgG~l~i 286 (360)
T 1tw3_A 238 --VEGDFFE-PLPR-KADAIILSFVLLNWPD---------------------------HDAVRILTRCAEALEPGGRILI 286 (360)
T ss_dssp --EECCTTS-CCSS-CEEEEEEESCGGGSCH---------------------------HHHHHHHHHHHHTEEEEEEEEE
T ss_pred --EeCCCCC-CCCC-CccEEEEcccccCCCH---------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 3468775 4554 4999999999986432 1233588888999999999999
Q ss_pred EEec-CCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEee
Q 036911 210 SIIG-NDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTV 282 (359)
Q Consensus 210 ~~~g-~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~ 282 (359)
.-.. .++. ..+ .+..+.+. .-|+..| ...++.+|+++++++.| |++.++.....
T Consensus 287 ~e~~~~~~~-~~~---~~~~~~~~-~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~~~ 341 (360)
T 1tw3_A 287 HERDDLHEN-SFN---EQFTELDL-RMLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQLPS 341 (360)
T ss_dssp EECCBCGGG-CCS---HHHHHHHH-HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred EEEeccCCC-CCc---chhhhccH-HHhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEEEeCCC
Confidence 8766 3321 111 11111111 1111111 24579999999999999 99988876643
No 87
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.79 E-value=2.6e-08 Score=87.88 Aligned_cols=151 Identities=14% Similarity=0.109 Sum_probs=93.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..++.. +..+++..|... ......+.. .+. +-
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~----------------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~--~~ 73 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE----------------DGYKTYGIEISD-----------LQLKKAENFSRENNF--KL 73 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH----------------TTCEEEEEECCH-----------HHHHHHHHHHHHHTC--CC
T ss_pred CCCEEEEECCCCCHHHHHHHHh----------------CCCEEEEEECCH-----------HHHHHHHHHHHhcCC--ce
Confidence 3579999999999987655411 236888888742 111111111 121 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.++. +++....+|++++|+|+++.++|+++ + .|...+|+.-++-|+|||+
T Consensus 74 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~--~-------------------------~~~~~~l~~~~~~LkpgG~ 123 (209)
T 2p8j_A 74 NISK---GDIRKLPFKDESMSFVYSYGTIFHMR--K-------------------------NDVKEAIDEIKRVLKPGGL 123 (209)
T ss_dssp CEEE---CCTTSCCSCTTCEEEEEECSCGGGSC--H-------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred EEEE---CchhhCCCCCCceeEEEEcChHHhCC--H-------------------------HHHHHHHHHHHHHcCCCcE
Confidence 3333 56666667889999999999999863 1 2345688899999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhc-cchhhhhc--cCCcCc--cCCCHHHHHHHHhcCCceEEeEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEG-LVEEAKVD--WFNLPY--YAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eG-li~~e~~d--~f~~P~--y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
+++..+...+.... .| .+....+. .-..|. .+.+.+|+...++..| |......
T Consensus 124 l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g-~~~~~~~ 181 (209)
T 2p8j_A 124 ACINFLTTKDERYN------------------KGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMK-VLFKEDR 181 (209)
T ss_dssp EEEEEEETTSTTTT------------------CSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSE-EEEEEEE
T ss_pred EEEEEecccchhcc------------------chhhhccccceeccCCCceeEEecCHHHHHHHHhhcC-ceeeeee
Confidence 99999987651000 00 01111110 001233 5678999999998877 5444333
No 88
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.79 E-value=3.9e-08 Score=85.82 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=89.3
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..+..+. +. ..+++..|+.. ......++ ..+.. +-.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~~~ 83 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLA--------AN---------GYDVDAWDKNA-----------MSIANVERIKSIENLD-NLH 83 (199)
T ss_dssp SCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHHHHTCT-TEE
T ss_pred CCeEEEEcCCCCHHHHHHH--------HC---------CCeEEEEECCH-----------HHHHHHHHHHHhCCCC-CcE
Confidence 5699999999999888775 21 25788888742 11111111 11210 112
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+ +.+++....+ ++++|+|+++.++||++. .+...+|+.-.+-|+|||++
T Consensus 84 ~---~~~d~~~~~~-~~~~D~v~~~~~l~~~~~---------------------------~~~~~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 84 T---RVVDLNNLTF-DRQYDFILSTVVLMFLEA---------------------------KTIPGLIANMQRCTKPGGYN 132 (199)
T ss_dssp E---EECCGGGCCC-CCCEEEEEEESCGGGSCG---------------------------GGHHHHHHHHHHTEEEEEEE
T ss_pred E---EEcchhhCCC-CCCceEEEEcchhhhCCH---------------------------HHHHHHHHHHHHhcCCCeEE
Confidence 2 3357766555 789999999999999752 13446888889999999998
Q ss_pred EEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 208 LLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 208 ~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
++....... ..+ .+ ....+..+.+|+++.++. |++.+.+..
T Consensus 133 ~~~~~~~~~--~~~-----------------~~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 133 LIVAAMDTA--DYP-----------------CT----------VGFPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp EEEEEBCCS--SSC-----------------CC----------SCCSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred EEEEeeccC--CcC-----------------CC----------CCCCCccCHHHHHHHhcC---CeEEEeccc
Confidence 876654433 100 00 112245689999999874 998887643
No 89
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=5.7e-08 Score=88.23 Aligned_cols=158 Identities=14% Similarity=0.010 Sum_probs=92.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|.++..+.+.. + +|+..|+.. ......++.... .+-.|+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~---------------~--~v~gvD~s~-----------~~~~~a~~~~~~-~~~~~~ 106 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFF---------------P--RVIGLDVSK-----------SALEIAAKENTA-ANISYR 106 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHS---------------S--CEEEEESCH-----------HHHHHHHHHSCC-TTEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhC---------------C--CEEEEECCH-----------HHHHHHHHhCcc-cCceEE
Confidence 45799999999999999887321 2 677778641 122222222211 122333
Q ss_pred ecccCCcccCCCCC-----CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 130 AGIPGSFYGRLFPN-----KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 130 ~~v~gsFy~~lfp~-----~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
. +++....++. .++|+++++.++||+.. .|...+|+.-.+-|+||
T Consensus 107 ~---~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~---------------------------~~~~~~l~~~~~~Lkpg 156 (245)
T 3ggd_A 107 L---LDGLVPEQAAQIHSEIGDANIYMRTGFHHIPV---------------------------EKRELLGQSLRILLGKQ 156 (245)
T ss_dssp E---CCTTCHHHHHHHHHHHCSCEEEEESSSTTSCG---------------------------GGHHHHHHHHHHHHTTT
T ss_pred E---CcccccccccccccccCccEEEEcchhhcCCH---------------------------HHHHHHHHHHHHHcCCC
Confidence 3 4554432221 34899999999999742 23446888899999999
Q ss_pred ceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccch--hhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEe
Q 036911 205 GHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVE--EAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHT 281 (359)
Q Consensus 205 G~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~--~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~ 281 (359)
|++++..++..+ ...+..+... ..|.-. ...+..-..| ...+.+|+.+.+ .| |++.......
T Consensus 157 G~l~i~~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 157 GAMYLIELGTGC------IDFFNSLLEK-----YGQLPYELLLVMEHGIRP-GIFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp CEEEEEEECTTH------HHHHHHHHHH-----HSSCCHHHHHHHTTTCCC-CCCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred CEEEEEeCCccc------cHHHHHHHhC-----CCCCchhhhhccccCCCC-CccCHHHHHHHh--CC-CEEEeccccc
Confidence 999998887654 1121111110 011100 0011111223 346899999999 77 9998776544
No 90
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.78 E-value=1.5e-08 Score=90.42 Aligned_cols=105 Identities=17% Similarity=0.211 Sum_probs=68.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+. +. .+ +++..|+.. ......+.. .+ .+-
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~--------~~-------~~--~v~~vD~s~-----------~~~~~a~~~~~~~~--~~~ 87 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLE--------DY-------GF--EVVGVDISE-----------DMIRKAREYAKSRE--SNV 87 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HT-------TC--EEEEEESCH-----------HHHHHHHHHHHHTT--CCC
T ss_pred CCCeEEEEeccCCHHHHHHH--------Hc-------CC--EEEEEECCH-----------HHHHHHHHHHHhcC--CCc
Confidence 36799999999999887665 22 12 788888741 111111111 11 122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+. +++....++++++|+++++.++|+... .|...+|+.-++-|+|||+
T Consensus 88 ~~~~---~d~~~~~~~~~~~D~v~~~~~~~~~~~---------------------------~~~~~~l~~~~~~L~~gG~ 137 (227)
T 1ve3_A 88 EFIV---GDARKLSFEDKTFDYVIFIDSIVHFEP---------------------------LELNQVFKEVRRVLKPSGK 137 (227)
T ss_dssp EEEE---CCTTSCCSCTTCEEEEEEESCGGGCCH---------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred eEEE---CchhcCCCCCCcEEEEEEcCchHhCCH---------------------------HHHHHHHHHHHHHcCCCcE
Confidence 3433 577666678899999999998443211 1234588888999999999
Q ss_pred EEEEEecC
Q 036911 207 VLLSIIGN 214 (359)
Q Consensus 207 l~~~~~g~ 214 (359)
+++..+..
T Consensus 138 l~~~~~~~ 145 (227)
T 1ve3_A 138 FIMYFTDL 145 (227)
T ss_dssp EEEEEECH
T ss_pred EEEEecCh
Confidence 99998753
No 91
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.75 E-value=1.2e-08 Score=96.18 Aligned_cols=47 Identities=11% Similarity=0.149 Sum_probs=37.1
Q ss_pred CCCCceeEEEecccccccccC-CCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEE
Q 036911 141 FPNKSLHFVHSSYSLHWLSQV-PEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSI 211 (359)
Q Consensus 141 fp~~S~d~~~S~~alhWls~~-p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~ 211 (359)
++++++|+|+|..++||+.-. . ..++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl~~~------------------------~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHLNWG------------------------DEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHHHHH------------------------HHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhhcCC------------------------HHHHHHHHHHHHHHhCCCcEEEEec
Confidence 578999999999999997410 0 1245568999999999999999864
No 92
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.72 E-value=1.3e-07 Score=91.36 Aligned_cols=150 Identities=19% Similarity=0.218 Sum_probs=94.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..++ +++ |..+++.-|+|. .-... . . .+. +
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~--~~~~a---~----------~--~~~--v 233 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------ETF-------PKLKCIVFDRPQ--VVENL---S----------G--SNN--L 233 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHH--HHTTC---C----------C--BTT--E
T ss_pred cCceEEEeCCCccHHHHHHH--------HHC-------CCCeEEEeeCHH--HHhhc---c----------c--CCC--c
Confidence 45799999999999888776 332 557899999841 10000 0 0 012 2
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc---Cce
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS---GGH 206 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p---GG~ 206 (359)
..+.++|++ .+|+ +|+++++.+||.+++. +...+|+.-++-|+| ||+
T Consensus 234 ~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~---------------------------~~~~~l~~~~~~L~p~~~gG~ 283 (352)
T 1fp2_A 234 TYVGGDMFT-SIPN--ADAVLLKYILHNWTDK---------------------------DCLRILKKCKEAVTNDGKRGK 283 (352)
T ss_dssp EEEECCTTT-CCCC--CSEEEEESCGGGSCHH---------------------------HHHHHHHHHHHHHSGGGCCCE
T ss_pred EEEeccccC-CCCC--ccEEEeehhhccCCHH---------------------------HHHHHHHHHHHhCCCCCCCcE
Confidence 334578877 5663 9999999999954331 223588899999999 999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+++.-...++ ......... ...+.++..- . ++ -..++.+|+++++++.| |++.++..
T Consensus 284 l~i~e~~~~~--~~~~~~~~~--~~~~~d~~~~--------~-~~--g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 284 VTIIDMVIDK--KKDENQVTQ--IKLLMDVNMA--------C-LN--GKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp EEEEECEECT--TTSCHHHHH--HHHHHHHHGG--------G-GT--CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred EEEEEeecCC--CCCccchhh--hHhhccHHHH--------h-cc--CCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 9998776554 111000111 1112222110 0 11 23468999999999999 99877654
No 93
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.71 E-value=7.5e-08 Score=89.68 Aligned_cols=137 Identities=17% Similarity=0.170 Sum_probs=90.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|.++..++ +. ..+|+..|+.. ......+. ..+. +-
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~--------~~---------g~~v~~vD~s~-----------~~~~~a~~~~~~~~~--~~ 169 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLS--------LL---------GYDVTSWDHNE-----------NSIAFLNETKEKENL--NI 169 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHHHTTC--CE
T ss_pred CCCcEEEECCCCCHHHHHHH--------HC---------CCeEEEEECCH-----------HHHHHHHHHHHHcCC--ce
Confidence 35799999999999988776 21 25788888742 11111111 1121 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.| +.+++....+ ++++|+|+++.++||++. .++..+|+.-.+-|+|||+
T Consensus 170 ~~---~~~d~~~~~~-~~~fD~i~~~~~~~~~~~---------------------------~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 170 ST---ALYDINAANI-QENYDFIVSTVVFMFLNR---------------------------ERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp EE---EECCGGGCCC-CSCEEEEEECSSGGGSCG---------------------------GGHHHHHHHHHHTEEEEEE
T ss_pred EE---EEeccccccc-cCCccEEEEccchhhCCH---------------------------HHHHHHHHHHHHhcCCCcE
Confidence 23 3357765444 889999999999999743 1344588899999999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+++....... ..+ .-..+.+..+.+|+++.++. |++...+.
T Consensus 219 l~i~~~~~~~--~~~---------------------------~~~~~~~~~~~~~l~~~~~~---~~~~~~~~ 259 (286)
T 3m70_A 219 NLIVAAMSTD--DVP---------------------------CPLPFSFTFAENELKEYYKD---WEFLEYNE 259 (286)
T ss_dssp EEEEEEBCCS--SSC---------------------------CSSCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred EEEEEecCCC--CCC---------------------------CCCCccccCCHHHHHHHhcC---CEEEEEEc
Confidence 8887665544 100 00223467788999998853 88877753
No 94
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.70 E-value=1.8e-07 Score=80.75 Aligned_cols=72 Identities=10% Similarity=0.083 Sum_probs=55.5
Q ss_pred CCCCceeEEEeccccccc-ccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEEecCCCCCC
Q 036911 141 FPNKSLHFVHSSYSLHWL-SQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSIIGNDRKPG 219 (359)
Q Consensus 141 fp~~S~d~~~S~~alhWl-s~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~ 219 (359)
++++++|+|+|+.++||+ .+. ..+|+.-++-|+|||++++.......
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~~-----------------------------~~~l~~~~r~LkpgG~l~~~~~~~~~--- 106 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLHS-----------------------------AEILAEIARILRPGGCLFLKEPVETA--- 106 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCCC-----------------------------HHHHHHHHHHEEEEEEEEEEEEEESS---
T ss_pred CCCCCEeEEEECChhhhcccCH-----------------------------HHHHHHHHHHCCCCEEEEEEcccccc---
Confidence 378999999999999998 432 24888999999999999995432211
Q ss_pred CCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeE
Q 036911 220 DPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRR 276 (359)
Q Consensus 220 ~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~ 276 (359)
. ..+.|.++.+++.+.+++.| | |+.
T Consensus 107 -------------------~-----------~~~~~~~~~~~~~~~l~~aG-f-i~~ 131 (176)
T 2ld4_A 107 -------------------V-----------DNNSKVKTASKLCSALTLSG-L-VEV 131 (176)
T ss_dssp -------------------S-----------CSSSSSCCHHHHHHHHHHTT-C-EEE
T ss_pred -------------------c-----------ccccccCCHHHHHHHHHHCC-C-cEe
Confidence 0 01567789999999999999 8 763
No 95
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.69 E-value=1.5e-07 Score=81.32 Aligned_cols=129 Identities=15% Similarity=0.132 Sum_probs=87.2
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..+. +. ..+++..|+.. ......+.... +..+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~~D~~~-----------~~~~~a~~~~~---~~~~ 93 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLS--------KQ---------GHDVLGTDLDP-----------ILIDYAKQDFP---EARW 93 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHCT---TSEE
T ss_pred cCCCeEEEECCCCCHHHHHHH--------HC---------CCcEEEEcCCH-----------HHHHHHHHhCC---CCcE
Confidence 346799999999999888775 21 25788888631 11111221111 1233
Q ss_pred EecccCCcccCCCCCCceeEEEec-ccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSS-YSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~-~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+ .+++....++++++|+++++ ..+|+++. .+...+|+.-.+-|+|||++
T Consensus 94 ~---~~d~~~~~~~~~~~D~i~~~~~~~~~~~~---------------------------~~~~~~l~~~~~~l~~~G~l 143 (195)
T 3cgg_A 94 V---VGDLSVDQISETDFDLIVSAGNVMGFLAE---------------------------DGREPALANIHRALGADGRA 143 (195)
T ss_dssp E---ECCTTTSCCCCCCEEEEEECCCCGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred E---EcccccCCCCCCceeEEEECCcHHhhcCh---------------------------HHHHHHHHHHHHHhCCCCEE
Confidence 3 35666666788999999998 77887532 13345888889999999999
Q ss_pred EEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 208 LLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 208 ~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
++....... .+.+++...+++.| |++.++..
T Consensus 144 ~~~~~~~~~----------------------------------------~~~~~~~~~l~~~G-f~~~~~~~ 174 (195)
T 3cgg_A 144 VIGFGAGRG----------------------------------------WVFGDFLEVAERVG-LELENAFE 174 (195)
T ss_dssp EEEEETTSS----------------------------------------CCHHHHHHHHHHHT-EEEEEEES
T ss_pred EEEeCCCCC----------------------------------------cCHHHHHHHHHHcC-CEEeeeec
Confidence 998743211 46788999999888 88876653
No 96
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.68 E-value=6.8e-08 Score=88.87 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=76.2
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
-.+|+|+|||+|..|..+...+ -|+-.|+.-|.. +.....+.+......+-..+.
T Consensus 78 G~~VldlG~G~G~~~~~la~~V--------------G~~G~V~avD~s-----------~~~~~~l~~~a~~~~ni~~V~ 132 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDII--------------GPRGRIYGVEFA-----------PRVMRDLLTVVRDRRNIFPIL 132 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH--------------CTTCEEEEEECC-----------HHHHHHHHHHSTTCTTEEEEE
T ss_pred CCEEEEecCcCCHHHHHHHHHh--------------CCCceEEEEeCC-----------HHHHHHHHHhhHhhcCeeEEE
Confidence 5799999999999999887544 266889998874 222233333222222345677
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
+..++.....++..++|++++..+.||- -..++..-.+-|||||+++++
T Consensus 133 ~d~~~p~~~~~~~~~vDvVf~d~~~~~~-------------------------------~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 133 GDARFPEKYRHLVEGVDGLYADVAQPEQ-------------------------------AAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp SCTTCGGGGTTTCCCEEEEEECCCCTTH-------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EeccCccccccccceEEEEEEeccCChh-------------------------------HHHHHHHHHHhccCCCEEEEE
Confidence 7777777777888999999987666651 123777778999999999998
Q ss_pred EecC
Q 036911 211 IIGN 214 (359)
Q Consensus 211 ~~g~ 214 (359)
.-.+
T Consensus 182 ik~r 185 (233)
T 4df3_A 182 IKAR 185 (233)
T ss_dssp EECC
T ss_pred Eecc
Confidence 7544
No 97
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.67 E-value=1.3e-07 Score=84.38 Aligned_cols=150 Identities=15% Similarity=0.079 Sum_probs=87.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh--hCCCCCCe
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV--KGSNFGPC 127 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~--~~~~~~~~ 127 (359)
...+|+|+|||+|..+..+.+ . .|..+|+..|+...=...+ ....+.. .....+-.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~--------~-------~p~~~v~gvD~s~~~l~~~-------~~~a~~~~~~~~~~~v~ 84 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVAR--------Q-------NPSRLVVALDADKSRMEKI-------SAKAAAKPAKGGLPNLL 84 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHH--------H-------CTTEEEEEEESCGGGGHHH-------HHHHTSCGGGTCCTTEE
T ss_pred CCCEEEEecCCCCHHHHHHHH--------H-------CCCCEEEEEECCHHHHHHH-------HHHHHHhhhhcCCCceE
Confidence 467999999999999988873 2 1558999999853201000 0001000 11111223
Q ss_pred EEecccCCcccCCCCCCceeEEEec---cccc--ccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSS---YSLH--WLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~---~alh--Wls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
|+ .+++....+++++ |.++.. ..+| |+.+.+ .+|+.-++-|+
T Consensus 85 ~~---~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~-----------------------------~~l~~~~~~Lk 131 (218)
T 3mq2_A 85 YL---WATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSP-----------------------------EMLRGMAAVCR 131 (218)
T ss_dssp EE---ECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSS-----------------------------HHHHHHHHTEE
T ss_pred EE---ecchhhCCCCCCC-CEEEEEccchhhhhhhhccHH-----------------------------HHHHHHHHHcC
Confidence 43 3677777777777 776632 2221 433322 38888899999
Q ss_pred cCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccC--CCHHHHHHHHhcCCceEEeEEEEE
Q 036911 203 SGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYA--PSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 203 pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~--~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
|||++++++....- ..+ .. ++. ..|.+. ...+++...+++.| |+|..++.+
T Consensus 132 pgG~l~~~~~~~~~--~~~--------------------~~--~~~--~~~~~~~~~~~~~l~~~l~~aG-f~i~~~~~~ 184 (218)
T 3mq2_A 132 PGASFLVALNLHAW--RPS--------------------VP--EVG--EHPEPTPDSADEWLAPRYAEAG-WKLADCRYL 184 (218)
T ss_dssp EEEEEEEEEEGGGB--TTB--------------------CG--GGT--TCCCCCHHHHHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCcEEEEEeccccc--ccc--------------------cc--ccc--cCCccchHHHHHHHHHHHHHcC-CCceeeecc
Confidence 99999997654322 100 01 111 122221 12455888899999 999998876
Q ss_pred e
Q 036911 281 T 281 (359)
Q Consensus 281 ~ 281 (359)
.
T Consensus 185 ~ 185 (218)
T 3mq2_A 185 E 185 (218)
T ss_dssp C
T ss_pred c
Confidence 5
No 98
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.65 E-value=2.4e-07 Score=87.92 Aligned_cols=144 Identities=20% Similarity=0.225 Sum_probs=85.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||||..|..++ ++ ...+|+.-|+..+ ++...+++. +.+-.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~--------~~--------ga~~V~aVDvs~~----------mL~~a~r~~-----~rv~~ 133 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVML--------QN--------GAKLVYAVDVGTN----------QLVWKLRQD-----DRVRS 133 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEECSSSS----------CSCHHHHTC-----TTEEE
T ss_pred cccEEEecCCCccHHHHHHH--------hC--------CCCEEEEEECCHH----------HHHHHHHhC-----cccce
Confidence 35799999999999998776 21 2268999998654 222212211 11110
Q ss_pred ecccCCcc---cCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 130 AGIPGSFY---GRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 130 ~~v~gsFy---~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.. ..++- ..-+|..++|++++..++|++.. +|..-++-|+|||+
T Consensus 134 ~~-~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~--------------------------------vL~e~~rvLkpGG~ 180 (291)
T 3hp7_A 134 ME-QYNFRYAEPVDFTEGLPSFASIDVSFISLNL--------------------------------ILPALAKILVDGGQ 180 (291)
T ss_dssp EC-SCCGGGCCGGGCTTCCCSEEEECCSSSCGGG--------------------------------THHHHHHHSCTTCE
T ss_pred ec-ccCceecchhhCCCCCCCEEEEEeeHhhHHH--------------------------------HHHHHHHHcCcCCE
Confidence 00 01111 11246667999999999998733 56677899999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHH-HhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMV-LEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv-~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+++.. .+ .....+ +-+ ..|.+.... .+..+.+++.+.++..| |.+..+...
T Consensus 181 lv~lv-kP-qfe~~~-------------~~~~~~G~vrd~~-------~~~~~~~~v~~~~~~~G-f~v~~~~~s 232 (291)
T 3hp7_A 181 VVALV-KP-QFEAGR-------------EQIGKNGIVRESS-------IHEKVLETVTAFAVDYG-FSVKGLDFS 232 (291)
T ss_dssp EEEEE-CG-GGTSCG-------------GGCC-CCCCCCHH-------HHHHHHHHHHHHHHHTT-EEEEEEEEC
T ss_pred EEEEE-Cc-ccccCh-------------hhcCCCCccCCHH-------HHHHHHHHHHHHHHHCC-CEEEEEEEC
Confidence 99963 11 100000 000 012221111 13347888999999999 998887654
No 99
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.65 E-value=9.1e-08 Score=86.26 Aligned_cols=105 Identities=25% Similarity=0.329 Sum_probs=68.3
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC-CCCCCeEE
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG-SNFGPCFI 129 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~-~~~~~~f~ 129 (359)
..+|+|+|||+|..+..+. + . .+++..|+.. ......++... ...+..++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~--------~---------~-~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~~ 84 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLA--------D---------H-YEVTGVDLSE-----------EMLEIAQEKAMETNRHVDFW 84 (243)
T ss_dssp TCEEEEESCTTCHHHHHHT--------T---------T-SEEEEEESCH-----------HHHHHHHHHHHHTTCCCEEE
T ss_pred CCeEEEecCCCCHHHHHHh--------h---------C-CeEEEEECCH-----------HHHHHHHHhhhhcCCceEEE
Confidence 4799999999999887665 1 1 5778888642 11111111100 00122333
Q ss_pred ecccCCcccCCCCCCceeEEEecc-cccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSY-SLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~-alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
. +++....++ +++|++++.. ++||+... .+...+|+.-++-|+|||+++
T Consensus 85 ~---~d~~~~~~~-~~fD~v~~~~~~~~~~~~~--------------------------~~~~~~l~~~~~~L~pgG~l~ 134 (243)
T 3d2l_A 85 V---QDMRELELP-EPVDAITILCDSLNYLQTE--------------------------ADVKQTFDSAARLLTDGGKLL 134 (243)
T ss_dssp E---CCGGGCCCS-SCEEEEEECTTGGGGCCSH--------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred E---cChhhcCCC-CCcCEEEEeCCchhhcCCH--------------------------HHHHHHHHHHHHhcCCCeEEE
Confidence 3 566555555 8999999987 99997431 244568888899999999999
Q ss_pred EEEecC
Q 036911 209 LSIIGN 214 (359)
Q Consensus 209 ~~~~g~ 214 (359)
+.+...
T Consensus 135 ~~~~~~ 140 (243)
T 3d2l_A 135 FDVHSP 140 (243)
T ss_dssp EEEECH
T ss_pred EEcCCH
Confidence 977543
No 100
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.63 E-value=3.9e-07 Score=78.82 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=84.2
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..++.+. ++ - +++..|+... . +.. ..+-.|+.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~--------~~---------~-~v~gvD~s~~-----------~---~~~----~~~~~~~~ 67 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLR--------KR---------N-TVVSTDLNIR-----------A---LES----HRGGNLVR 67 (170)
T ss_dssp SCEEEEETCTTCHHHHHHT--------TT---------S-EEEEEESCHH-----------H---HHT----CSSSCEEE
T ss_pred CCeEEEeccCccHHHHHHH--------hc---------C-cEEEEECCHH-----------H---Hhc----ccCCeEEE
Confidence 4599999999999988775 11 1 7888887421 1 110 00123333
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
+++.+ .++++++|+++|+..+||.++.+. +.. ..+...+++.-.+.| |||++++.
T Consensus 68 ---~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~~l-pgG~l~~~ 122 (170)
T 3q87_B 68 ---ADLLC-SINQESVDVVVFNPPYVPDTDDPI-IGG-------------------GYLGREVIDRFVDAV-TVGMLYLL 122 (170)
T ss_dssp ---CSTTT-TBCGGGCSEEEECCCCBTTCCCTT-TBC-------------------CGGGCHHHHHHHHHC-CSSEEEEE
T ss_pred ---CChhh-hcccCCCCEEEECCCCccCCcccc-ccC-------------------CcchHHHHHHHHhhC-CCCEEEEE
Confidence 56665 667799999999999999876533 110 112223565666667 99999998
Q ss_pred EecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEeec
Q 036911 211 IIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTVD 283 (359)
Q Consensus 211 ~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~~ 283 (359)
..+... .+++++.+++.| |++..+......
T Consensus 123 ~~~~~~------------------------------------------~~~l~~~l~~~g-f~~~~~~~~~~~ 152 (170)
T 3q87_B 123 VIEANR------------------------------------------PKEVLARLEERG-YGTRILKVRKIL 152 (170)
T ss_dssp EEGGGC------------------------------------------HHHHHHHHHHTT-CEEEEEEEEECS
T ss_pred EecCCC------------------------------------------HHHHHHHHHHCC-CcEEEEEeeccC
Confidence 754432 457888888888 888777665433
No 101
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.61 E-value=1.1e-07 Score=84.91 Aligned_cols=164 Identities=12% Similarity=0.098 Sum_probs=93.3
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..++.+++. .|..+++..|+.. ......+. ..+. .+-.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~---------------~p~~~v~gvD~s~-----------~~l~~a~~~~~~~~~-~~v~ 94 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQ---------------NPDINYIGIDIQK-----------SVLSYALDKVLEVGV-PNIK 94 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHH---------------CTTSEEEEEESCH-----------HHHHHHHHHHHHHCC-SSEE
T ss_pred CCeEEEEccCcCHHHHHHHHH---------------CCCCCEEEEEcCH-----------HHHHHHHHHHHHcCC-CCEE
Confidence 568999999999999887632 1568899999742 11111111 1222 1223
Q ss_pred EEecccCCcccC--CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 128 FIAGIPGSFYGR--LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 128 f~~~v~gsFy~~--lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
|+. ++.... .++++++|+++++...+|....-. +..-....||+.-++-|+|||
T Consensus 95 ~~~---~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 95 LLW---VDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHE---------------------KRRLTYKTFLDTFKRILPENG 150 (214)
T ss_dssp EEE---CCSSCGGGTSCTTCCSEEEEESCCCCCSGGGG---------------------GGSTTSHHHHHHHHHHSCTTC
T ss_pred EEe---CCHHHHHhhcCCCCCCEEEEECCCCccccchh---------------------hhccCCHHHHHHHHHHcCCCc
Confidence 433 455443 378899999999987777431100 000123458888899999999
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhh-hccCCcCccCCCHHHHHHHHhcCCceEEeEEE
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAK-VDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFD 278 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~-~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e 278 (359)
.+++..- + .. .....+..+...|.-..+. .|-+..++......+++......| +.|.++.
T Consensus 151 ~l~~~~~---~------~~---~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~~~~ 211 (214)
T 1yzh_A 151 EIHFKTD---N------RG---LFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIYRVE 211 (214)
T ss_dssp EEEEEES---C------HH---HHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCEEEE
T ss_pred EEEEEeC---C------HH---HHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeEEEE
Confidence 9988752 1 11 1233334444456422111 121222233334457777777777 6666554
No 102
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.58 E-value=1.1e-07 Score=88.66 Aligned_cols=111 Identities=13% Similarity=0.171 Sum_probs=74.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCC---
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSN--- 123 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~--- 123 (359)
...+|+|+|||+|..+..++ +. ..+|+..|+.. ......++. .+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~l~~a~~~~~~~~~~~~~ 108 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLV--------EE---------GFSVTSVDASD-----------KMLKYALKERWNRRKEPAF 108 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHHHTTTSHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------HC---------CCeEEEEECCH-----------HHHHHHHHhhhhccccccc
Confidence 35799999999999988776 21 14888889752 111111111 0000
Q ss_pred CCCeEEecccCCcccCC---CCCCceeEEEec-ccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 124 FGPCFIAGIPGSFYGRL---FPNKSLHFVHSS-YSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 124 ~~~~f~~~v~gsFy~~l---fp~~S~d~~~S~-~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
.+-.+.. +++.... ++++++|+|+++ .++|++.+.... .+++..+|+.-++
T Consensus 109 ~~~~~~~---~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~----------------------~~~~~~~l~~~~~ 163 (293)
T 3thr_A 109 DKWVIEE---ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD----------------------QSEHRLALKNIAS 163 (293)
T ss_dssp HTCEEEE---CCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS----------------------SHHHHHHHHHHHH
T ss_pred ceeeEee---cChhhCccccccCCCeEEEEEcChHHhhcCccccC----------------------HHHHHHHHHHHHH
Confidence 0112222 4555544 789999999998 899997764321 2356679999999
Q ss_pred hhccCceEEEEEec
Q 036911 200 EILSGGHVLLSIIG 213 (359)
Q Consensus 200 EL~pGG~l~~~~~g 213 (359)
-|+|||++++....
T Consensus 164 ~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 164 MVRPGGLLVIDHRN 177 (293)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred HcCCCeEEEEEeCC
Confidence 99999999998864
No 103
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.57 E-value=2.2e-07 Score=82.16 Aligned_cols=122 Identities=15% Similarity=0.160 Sum_probs=79.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+. +. +..+++..|+.. ......+.. .+.. .-
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~v 111 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAH--------KL--------GAKSVLATDISD-----------ESMTAAEENAALNGIY-DI 111 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESCH-----------HHHHHHHHHHHHTTCC-CC
T ss_pred CCCEEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCC-ce
Confidence 35799999999999887754 21 335888888742 111112111 1211 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.+ +.+++.. ++++++|+++++..+|++.+ +|+.-.+-|+|||+
T Consensus 112 ~~---~~~d~~~--~~~~~fD~i~~~~~~~~~~~--------------------------------~l~~~~~~L~~gG~ 154 (205)
T 3grz_A 112 AL---QKTSLLA--DVDGKFDLIVANILAEILLD--------------------------------LIPQLDSHLNEDGQ 154 (205)
T ss_dssp EE---EESSTTT--TCCSCEEEEEEESCHHHHHH--------------------------------HGGGSGGGEEEEEE
T ss_pred EE---Eeccccc--cCCCCceEEEECCcHHHHHH--------------------------------HHHHHHHhcCCCCE
Confidence 23 3356644 45689999999988887522 55566788999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
++++.+... +.+++.+.+++.| |++.....
T Consensus 155 l~~~~~~~~------------------------------------------~~~~~~~~~~~~G-f~~~~~~~ 184 (205)
T 3grz_A 155 VIFSGIDYL------------------------------------------QLPKIEQALAENS-FQIDLKMR 184 (205)
T ss_dssp EEEEEEEGG------------------------------------------GHHHHHHHHHHTT-EEEEEEEE
T ss_pred EEEEecCcc------------------------------------------cHHHHHHHHHHcC-CceEEeec
Confidence 999765432 2567888888888 88877654
No 104
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.56 E-value=5e-08 Score=89.42 Aligned_cols=144 Identities=18% Similarity=0.190 Sum_probs=81.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC----CCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG----SNFG 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~----~~~~ 125 (359)
...+|+|+|||||..|..++ ++ .+ .+|+..|+..+ +.....++... ...+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la--------~~-------g~-~~V~gvDis~~----------ml~~a~~~~~~~~~~~~~~ 90 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVML--------QN-------GA-KLVYALDVGTN----------QLAWKIRSDERVVVMEQFN 90 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT-------TC-SEEEEECSSCC----------CCCHHHHTCTTEEEECSCC
T ss_pred CCCEEEEEccCCCHHHHHHH--------hc-------CC-CEEEEEcCCHH----------HHHHHHHhCccccccccce
Confidence 45699999999999998776 21 12 48999998754 11111111000 0000
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.+ ..++++...+++..++|+++++. + .+|+.-++-|+|||
T Consensus 91 ~~~--~~~~~~~~~~~d~~~~D~v~~~l--------~-----------------------------~~l~~i~rvLkpgG 131 (232)
T 3opn_A 91 FRN--AVLADFEQGRPSFTSIDVSFISL--------D-----------------------------LILPPLYEILEKNG 131 (232)
T ss_dssp GGG--CCGGGCCSCCCSEEEECCSSSCG--------G-----------------------------GTHHHHHHHSCTTC
T ss_pred EEE--eCHhHcCcCCCCEEEEEEEhhhH--------H-----------------------------HHHHHHHHhccCCC
Confidence 011 12234433345555677666542 1 26778899999999
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
++++.+ .+. + +..+..+-..|.+.... .+..+.+++.+.+++.| |++..++..
T Consensus 132 ~lv~~~--~p~---------~---e~~~~~~~~~G~~~d~~-------~~~~~~~~l~~~l~~aG-f~v~~~~~~ 184 (232)
T 3opn_A 132 EVAALI--KPQ---------F---EAGREQVGKNGIIRDPK-------VHQMTIEKVLKTATQLG-FSVKGLTFS 184 (232)
T ss_dssp EEEEEE--CHH---------H---HSCHHHHC-CCCCCCHH-------HHHHHHHHHHHHHHHHT-EEEEEEEEC
T ss_pred EEEEEE--Ccc---------c---ccCHHHhCcCCeecCcc-------hhHHHHHHHHHHHHHCC-CEEEEEEEc
Confidence 999965 211 1 11222222234332211 12238899999999999 999887754
No 105
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.53 E-value=1.3e-07 Score=86.96 Aligned_cols=61 Identities=13% Similarity=0.066 Sum_probs=42.3
Q ss_pred hHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecC
Q 036911 17 SYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLND 96 (359)
Q Consensus 17 sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nD 96 (359)
.|+.....|.+....++..|+. + ......+|+|+|||+|..|..+.+.+ .|.-+|+..|
T Consensus 50 ~yr~w~~~~skla~~ll~~l~~----~---~l~~g~~VLDlG~GtG~~t~~la~~v--------------~~~G~V~avD 108 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLKT----N---PIRKGTKVLYLGAASGTTISHVSDII--------------ELNGKAYGVE 108 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCSC----C---SCCTTCEEEEETCTTSHHHHHHHHHH--------------TTTSEEEEEE
T ss_pred chhhhchHHHHHHHHHHhhhhh----c---CCCCCCEEEEEeecCCHHHHHHHHHh--------------CCCCEEEEEE
Confidence 4777778888877665544321 1 11235899999999999988877443 2457899999
Q ss_pred CC
Q 036911 97 LP 98 (359)
Q Consensus 97 Lp 98 (359)
+.
T Consensus 109 ~s 110 (232)
T 3id6_C 109 FS 110 (232)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 106
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.51 E-value=1.5e-07 Score=84.62 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=69.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..++.+++. .|..+++..|+.. ......+. ..+. .++
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~---------------~p~~~v~giD~s~-----------~~l~~a~~~~~~~~~--~nv 90 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQ---------------NPDINYIGIELFK-----------SVIVTAVQKVKDSEA--QNV 90 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHH---------------CTTSEEEEECSCH-----------HHHHHHHHHHHHSCC--SSE
T ss_pred CceEEEEecCCCHHHHHHHHH---------------CCCCCEEEEEech-----------HHHHHHHHHHHHcCC--CCE
Confidence 568999999999999887622 2568899999742 11111111 1121 232
Q ss_pred EEecccCCccc--CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 128 FIAGIPGSFYG--RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 128 f~~~v~gsFy~--~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-+ +.++... ..++++++|.++++...+|....-. +. .-....||+.-++-|+|||
T Consensus 91 ~~--~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~----------rl~~~~~l~~~~~~LkpgG 147 (213)
T 2fca_A 91 KL--LNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KR----------RLTYSHFLKKYEEVMGKGG 147 (213)
T ss_dssp EE--ECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGG-----------GG----------STTSHHHHHHHHHHHTTSC
T ss_pred EE--EeCCHHHHHhhcCcCCcCEEEEECCCCCcCcccc-----------cc----------ccCcHHHHHHHHHHcCCCC
Confidence 22 2355544 2378899999999887777432100 00 0012358888899999999
Q ss_pred eEEEEE
Q 036911 206 HVLLSI 211 (359)
Q Consensus 206 ~l~~~~ 211 (359)
.+++.+
T Consensus 148 ~l~~~t 153 (213)
T 2fca_A 148 SIHFKT 153 (213)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 107
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.50 E-value=1.4e-07 Score=85.36 Aligned_cols=135 Identities=14% Similarity=0.157 Sum_probs=79.4
Q ss_pred HHHHHHHHHhHHHHHHHH-------HHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEec
Q 036911 23 KIQKRAMLTAKPILQDSI-------KKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLN 95 (359)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai-------~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~n 95 (359)
..|++.++++.|.+.-.. .++. .....+|+|+|||+|..++.+++ . .|...|+..
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f---~~~~~~vLDiGcG~G~~~~~lA~--------~-------~p~~~v~gi 64 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF---GREAPVTLEIGFGMGASLVAMAK--------D-------RPEQDFLGI 64 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH---SSCCCEEEEESCTTCHHHHHHHH--------H-------CTTSEEEEE
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc---CCCCCeEEEEeeeChHHHHHHHH--------H-------CCCCeEEEE
Confidence 357777777777553110 0111 11357999999999999988863 2 256889999
Q ss_pred CCCCCchhhhhhcccchHHHHHH---hhCCCCCCeEEecccCCccc---CCCCCCceeEEEecccccccccCCCCccccC
Q 036911 96 DLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPCFIAGIPGSFYG---RLFPNKSLHFVHSSYSLHWLSQVPEGLVSES 169 (359)
Q Consensus 96 DLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~f~~~v~gsFy~---~lfp~~S~d~~~S~~alhWls~~p~~~~~~~ 169 (359)
|+.. ......+. ..+. .++-+ +.++..+ ..+|++++|.+++++...|......
T Consensus 65 D~s~-----------~~l~~a~~~~~~~~l--~nv~~--~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~------ 123 (218)
T 3dxy_A 65 EVHS-----------PGVGACLASAHEEGL--SNLRV--MCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHN------ 123 (218)
T ss_dssp CSCH-----------HHHHHHHHHHHHTTC--SSEEE--ECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGG------
T ss_pred EecH-----------HHHHHHHHHHHHhCC--CcEEE--EECCHHHHHHHHcCCCChheEEEeCCCCccchhhh------
Confidence 9752 11122211 1221 23222 3355543 3489999999999998888432110
Q ss_pred CCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEE
Q 036911 170 GVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSI 211 (359)
Q Consensus 170 ~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~ 211 (359)
+..+ .-..||+.-++-|+|||.+++.+
T Consensus 124 -----~rr~----------~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 124 -----KRRI----------VQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp -----GGSS----------CSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----hhhh----------hhHHHHHHHHHHcCCCcEEEEEe
Confidence 0000 00248888899999999999887
No 108
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.50 E-value=3.1e-07 Score=80.93 Aligned_cols=124 Identities=15% Similarity=0.072 Sum_probs=77.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
+...+|+|+|||+|..+..++ +. .+ .+++..|+.. ......++......+-.+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~--------~~-------~~-~~v~~~D~s~-----------~~~~~a~~~~~~~~~i~~ 93 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELF--------LG-------GF-PNVTSVDYSS-----------VVVAAMQACYAHVPQLRW 93 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHH--------HT-------TC-CCEEEEESCH-----------HHHHHHHHHTTTCTTCEE
T ss_pred CCCCeEEEECCCCcHHHHHHH--------Hc-------CC-CcEEEEeCCH-----------HHHHHHHHhcccCCCcEE
Confidence 346799999999999988776 21 12 2788888641 122222222111112233
Q ss_pred EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+. +++....++++++|+|+++.++|.+..... ..|+.. .....+...+|+.-.+-|+|||+++
T Consensus 94 ~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~~-------~~~~~~~~~~l~~~~~~LkpgG~li 156 (215)
T 2pxx_A 94 ET---MDVRKLDFPSASFDVVLEKGTLDALLAGER-------DPWTVS-------SEGVHTVDQVLSEVSRVLVPGGRFI 156 (215)
T ss_dssp EE---CCTTSCCSCSSCEEEEEEESHHHHHTTTCS-------CTTSCC-------HHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred EE---cchhcCCCCCCcccEEEECcchhhhccccc-------cccccc-------cchhHHHHHHHHHHHHhCcCCCEEE
Confidence 33 466665678899999999999987643211 011110 0013466789999999999999999
Q ss_pred EEEecCCC
Q 036911 209 LSIIGNDR 216 (359)
Q Consensus 209 ~~~~g~~~ 216 (359)
+..++..+
T Consensus 157 ~~~~~~~~ 164 (215)
T 2pxx_A 157 SMTSAAPH 164 (215)
T ss_dssp EEESCCHH
T ss_pred EEeCCCcH
Confidence 99877644
No 109
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.49 E-value=1.2e-07 Score=88.72 Aligned_cols=100 Identities=13% Similarity=0.055 Sum_probs=65.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|+.++ ++ ..+|+..|+.. ...+..++.... .
T Consensus 45 ~g~~VLDlGcGtG~~a~~La--------~~---------g~~V~gvD~S~-----------~ml~~Ar~~~~~---~--- 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKAL--------ER---------GASVTVFDFSQ-----------RMCDDLAEALAD---R--- 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHTSS---S---
T ss_pred CcCEEEEEeCcchHHHHHHH--------hc---------CCEEEEEECCH-----------HHHHHHHHHHHh---c---
Confidence 45799999999999998886 22 25788888742 222323322211 1
Q ss_pred ecccCCcccCCC-----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 130 AGIPGSFYGRLF-----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 130 ~~v~gsFy~~lf-----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
.+.+++..... +++++|+|+|+.++||+.. .+...+|+.-++-| ||
T Consensus 91 -~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~---------------------------~~~~~~l~~l~~lL-PG 141 (261)
T 3iv6_A 91 -CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT---------------------------EEARRACLGMLSLV-GS 141 (261)
T ss_dssp -CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH---------------------------HHHHHHHHHHHHHH-TT
T ss_pred -cceeeeeecccccccccCCCccEEEEhhhhHhCCH---------------------------HHHHHHHHHHHHhC-cC
Confidence 12233332222 2579999999999998643 13445777778888 99
Q ss_pred ceEEEEEe
Q 036911 205 GHVLLSII 212 (359)
Q Consensus 205 G~l~~~~~ 212 (359)
|++++++.
T Consensus 142 G~l~lS~~ 149 (261)
T 3iv6_A 142 GTVRASVK 149 (261)
T ss_dssp SEEEEEEE
T ss_pred cEEEEEec
Confidence 99999985
No 110
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.46 E-value=1.4e-06 Score=79.05 Aligned_cols=105 Identities=20% Similarity=0.341 Sum_probs=66.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh-CCCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK-GSNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~-~~~~~~~f 128 (359)
...+|+|+|||+|..+..++ +. ..+++..|+.. ......++.. ....+-.|
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s~-----------~~l~~a~~~~~~~~~~v~~ 92 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELA--------ER---------GYEVVGLDLHE-----------EMLRVARRKAKERNLKIEF 92 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHHHTTCCCEE
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HC---------CCeEEEEECCH-----------HHHHHHHHHHHhcCCceEE
Confidence 35799999999999988776 21 26788888742 1111121111 00112233
Q ss_pred EecccCCcccCCCCCCceeEEEecc-cccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSY-SLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~-alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+. +++....+ ++++|+|++.. ++|+++. .+...+|+.-++-|+|||++
T Consensus 93 ~~---~d~~~~~~-~~~fD~v~~~~~~~~~~~~---------------------------~~~~~~l~~~~~~L~pgG~l 141 (252)
T 1wzn_A 93 LQ---GDVLEIAF-KNEFDAVTMFFSTIMYFDE---------------------------EDLRKLFSKVAEALKPGGVF 141 (252)
T ss_dssp EE---SCGGGCCC-CSCEEEEEECSSGGGGSCH---------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred EE---CChhhccc-CCCccEEEEcCCchhcCCH---------------------------HHHHHHHHHHHHHcCCCeEE
Confidence 33 57765444 47899999864 4555321 24556898889999999999
Q ss_pred EEEEec
Q 036911 208 LLSIIG 213 (359)
Q Consensus 208 ~~~~~g 213 (359)
++.+..
T Consensus 142 i~~~~~ 147 (252)
T 1wzn_A 142 ITDFPC 147 (252)
T ss_dssp EEEEEC
T ss_pred EEeccc
Confidence 988764
No 111
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.45 E-value=5.7e-07 Score=76.08 Aligned_cols=112 Identities=16% Similarity=0.242 Sum_probs=72.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+.+.+ .|..+++..|+.. .-. ++ +..++
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~--~~~----~~--------------~~~~~ 67 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI--------------GGKGRIIACDLLP--MDP----IV--------------GVDFL 67 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH--------------CTTCEEEEEESSC--CCC----CT--------------TEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh--------------CCCCeEEEEECcc--ccc----cC--------------cEEEE
Confidence 35699999999999988877432 2347888888742 100 00 11232
Q ss_pred ecccCCcccCC--------CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 130 AGIPGSFYGRL--------FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 130 ~~v~gsFy~~l--------fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
. +++.... ++++++|+++++..+||.......... .......+|+.-.+-|
T Consensus 68 ~---~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~------------------~~~~~~~~l~~~~~~L 126 (180)
T 1ej0_A 68 Q---GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPR------------------AMYLVELALEMCRDVL 126 (180)
T ss_dssp E---SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHH------------------HHHHHHHHHHHHHHHE
T ss_pred E---cccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHH------------------HHHHHHHHHHHHHHHc
Confidence 2 4554433 678899999999999996542110000 0111246888888999
Q ss_pred ccCceEEEEEecCCC
Q 036911 202 LSGGHVLLSIIGNDR 216 (359)
Q Consensus 202 ~pGG~l~~~~~g~~~ 216 (359)
+|||.++++.+...+
T Consensus 127 ~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 127 APGGSFVVKVFQGEG 141 (180)
T ss_dssp EEEEEEEEEEESSTT
T ss_pred CCCcEEEEEEecCCc
Confidence 999999998876654
No 112
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.45 E-value=4e-07 Score=77.97 Aligned_cols=101 Identities=13% Similarity=0.171 Sum_probs=66.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..++ +. .|..+++..|+.. ......++. .+.. .+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~-~~ 77 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWL--------RS-------TPQTTAVCFEISE-----------ERRERILSNAINLGVS-DR 77 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHH--------TT-------SSSEEEEEECSCH-----------HHHHHHHHHHHTTTCT-TS
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HH-------CCCCeEEEEeCCH-----------HHHHHHHHHHHHhCCC-CC
Confidence 35799999999999988776 22 1458899999742 111222211 1211 13
Q ss_pred eEEecccCCcccCCCCC--CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 127 CFIAGIPGSFYGRLFPN--KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~--~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
+++. ++..+ .+|. +++|+++++.++|| +. +|+.-.+-|+||
T Consensus 78 ~~~~---~d~~~-~~~~~~~~~D~i~~~~~~~~----~~-----------------------------~l~~~~~~L~~g 120 (178)
T 3hm2_A 78 IAVQ---QGAPR-AFDDVPDNPDVIFIGGGLTA----PG-----------------------------VFAAAWKRLPVG 120 (178)
T ss_dssp EEEE---CCTTG-GGGGCCSCCSEEEECC-TTC----TT-----------------------------HHHHHHHTCCTT
T ss_pred EEEe---cchHh-hhhccCCCCCEEEECCcccH----HH-----------------------------HHHHHHHhcCCC
Confidence 4444 44433 3444 89999999999988 21 777888999999
Q ss_pred ceEEEEEecC
Q 036911 205 GHVLLSIIGN 214 (359)
Q Consensus 205 G~l~~~~~g~ 214 (359)
|++++..+..
T Consensus 121 G~l~~~~~~~ 130 (178)
T 3hm2_A 121 GRLVANAVTV 130 (178)
T ss_dssp CEEEEEECSH
T ss_pred CEEEEEeecc
Confidence 9999887544
No 113
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.44 E-value=3.3e-07 Score=83.33 Aligned_cols=158 Identities=13% Similarity=0.045 Sum_probs=83.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHH---HH---hhCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKL---KE---VKGSN 123 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~---~~---~~~~~ 123 (359)
...+|+|+|||+|..+..+. ++ .|..+|+..|+... ...+.. ++ ..+.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la--------~~-------~~~~~v~GvD~s~~----------~ml~~A~~A~~~~~~~~~- 77 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLA--------IN-------DQNTFYIGIDPVKE----------NLFDISKKIIKKPSKGGL- 77 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHH--------HT-------CTTEEEEEECSCCG----------GGHHHHHHHTSCGGGTCC-
T ss_pred CCCEEEEEeccCcHHHHHHH--------Hh-------CCCCEEEEEeCCHH----------HHHHHHHHHHHHHHHcCC-
Confidence 35799999999999988776 22 25688999998522 111110 11 1111
Q ss_pred CCCeEEecccCCcccCCC-CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 124 FGPCFIAGIPGSFYGRLF-PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 124 ~~~~f~~~v~gsFy~~lf-p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.+-.|+. ++...... ..+.+|.+++++...++.. .. ..+...+|+.-++-||
T Consensus 78 ~~v~~~~---~d~~~l~~~~~d~v~~i~~~~~~~~~~~---~~---------------------~~~~~~~l~~~~r~Lk 130 (225)
T 3p2e_A 78 SNVVFVI---AAAESLPFELKNIADSISILFPWGTLLE---YV---------------------IKPNRDILSNVADLAK 130 (225)
T ss_dssp SSEEEEC---CBTTBCCGGGTTCEEEEEEESCCHHHHH---HH---------------------HTTCHHHHHHHHTTEE
T ss_pred CCeEEEE---cCHHHhhhhccCeEEEEEEeCCCcHHhh---hh---------------------hcchHHHHHHHHHhcC
Confidence 1223433 44433211 1256777776654322100 00 0112347888899999
Q ss_pred cCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEEee
Q 036911 203 SGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIHTV 282 (359)
Q Consensus 203 pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~~~ 282 (359)
|||++++.....+.. . . +... ..+. ....|.|++ .+|+.+.+++.| |+|..++.+..
T Consensus 131 pGG~l~i~~~~~~~~-~-~-------~~~~-----~~~~-------~~~~~~~~~-~~el~~~l~~aG-f~v~~~~~~~~ 187 (225)
T 3p2e_A 131 KEAHFEFVTTYSDSY-E-E-------AEIK-----KRGL-------PLLSKAYFL-SEQYKAELSNSG-FRIDDVKELDN 187 (225)
T ss_dssp EEEEEEEEECCCC-----------------------------------CCHHHHH-SHHHHHHHHHHT-CEEEEEEEECH
T ss_pred CCcEEEEEEeccccc-h-h-------chhh-----hcCC-------CCCChhhcc-hHHHHHHHHHcC-CCeeeeeecCH
Confidence 999999954332221 0 0 0000 0010 001122333 246999999999 99999998864
Q ss_pred c
Q 036911 283 D 283 (359)
Q Consensus 283 ~ 283 (359)
.
T Consensus 188 ~ 188 (225)
T 3p2e_A 188 E 188 (225)
T ss_dssp H
T ss_pred H
Confidence 3
No 114
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.43 E-value=1.1e-06 Score=77.13 Aligned_cols=113 Identities=16% Similarity=0.160 Sum_probs=68.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|..+++.. +++..+|+..|+.... .++ +-.|+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~-------------~~~~~~v~gvD~s~~~------~~~--------------~v~~~ 68 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERT-------------KNYKNKIIGIDKKIMD------PIP--------------NVYFI 68 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHT-------------TTSCEEEEEEESSCCC------CCT--------------TCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHc-------------CCCCceEEEEeCCccC------CCC--------------CceEE
Confidence 35799999999999998887332 1114788888876420 000 11222
Q ss_pred ecccCCcccCC-------------------------CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCC
Q 036911 130 AGIPGSFYGRL-------------------------FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTS 184 (359)
Q Consensus 130 ~~v~gsFy~~l-------------------------fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~ 184 (359)
. +++.... ++++++|+|+|..++||..... .+ ..
T Consensus 69 ~---~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~---~d---------~~------ 127 (201)
T 2plw_A 69 Q---GEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKI---DD---------HL------ 127 (201)
T ss_dssp E---CCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHH---HH---------HH------
T ss_pred E---ccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcc---cC---------HH------
Confidence 2 3443322 5778999999999999842100 00 00
Q ss_pred CccccHHHHHHHHHHhhccCceEEEEEecCCC
Q 036911 185 PVGRDFTLFLTSRSEEILSGGHVLLSIIGNDR 216 (359)
Q Consensus 185 ~~~~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~ 216 (359)
...+....+|+.-.+-|+|||+|++.++...+
T Consensus 128 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 128 NSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred HHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 00011223666678899999999998776543
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.43 E-value=9e-07 Score=80.03 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=62.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++.+ +..+|+..|... .....++.......+-.|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~---------------~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~v~~~ 127 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA---------------DKGIVYAIEYAP-----------RIMRELLDACAERENIIPI 127 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT---------------TTSEEEEEESCH-----------HHHHHHHHHTTTCTTEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHc---------------CCcEEEEEECCH-----------HHHHHHHHHhhcCCCeEEE
Confidence 35799999999999998887332 246888888742 1112222211111122343
Q ss_pred ecccCCccc----CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 130 AGIPGSFYG----RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 130 ~~v~gsFy~----~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
. +++.. ..++ +++|+++ |++.+ |. ....+|+.-.+-|+|||
T Consensus 128 ~---~d~~~~~~~~~~~-~~~D~v~-----~~~~~-~~-------------------------~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 128 L---GDANKPQEYANIV-EKVDVIY-----EDVAQ-PN-------------------------QAEILIKNAKWFLKKGG 172 (230)
T ss_dssp E---CCTTCGGGGTTTS-CCEEEEE-----ECCCS-TT-------------------------HHHHHHHHHHHHEEEEE
T ss_pred E---CCCCCcccccccC-ccEEEEE-----EecCC-hh-------------------------HHHHHHHHHHHhCCCCc
Confidence 3 45544 4455 8999998 44322 11 12347888888999999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
++++++.
T Consensus 173 ~l~i~~~ 179 (230)
T 1fbn_A 173 YGMIAIK 179 (230)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999854
No 116
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.42 E-value=1e-06 Score=77.19 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=69.6
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..+..+++.+ .|..+++..|+.. ......++ ..+...+-.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~--------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~v~ 77 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLV--------------GENGRVFGFDIQD-----------KAIANTTKKLTDLNLIDRVT 77 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHH--------------CTTCEEEEECSCH-----------HHHHHHHHHHHHTTCGGGEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCCeE
Confidence 5799999999999998887443 2346899999742 11111111 111111122
Q ss_pred EEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 128 FIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 128 f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
| +.+++.... ++++++|+++++..+ +|..- ..+ ....++...+|+.-.+-|+|||+
T Consensus 78 ~---~~~d~~~~~~~~~~~fD~v~~~~~~-----~~~~~----------~~~-----~~~~~~~~~~l~~~~~~Lk~gG~ 134 (197)
T 3eey_A 78 L---IKDGHQNMDKYIDCPVKAVMFNLGY-----LPSGD----------HSI-----STRPETTIQALSKAMELLVTGGI 134 (197)
T ss_dssp E---ECSCGGGGGGTCCSCEEEEEEEESB-----CTTSC----------TTC-----BCCHHHHHHHHHHHHHHEEEEEE
T ss_pred E---EECCHHHHhhhccCCceEEEEcCCc-----ccCcc----------ccc-----ccCcccHHHHHHHHHHhCcCCCE
Confidence 3 335665443 567899999997655 12100 000 00123445688888999999999
Q ss_pred EEEEEecC
Q 036911 207 VLLSIIGN 214 (359)
Q Consensus 207 l~~~~~g~ 214 (359)
+++.....
T Consensus 135 l~~~~~~~ 142 (197)
T 3eey_A 135 ITVVIYYG 142 (197)
T ss_dssp EEEEECCB
T ss_pred EEEEEccC
Confidence 99987644
No 117
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.41 E-value=1.4e-06 Score=84.26 Aligned_cols=105 Identities=11% Similarity=0.081 Sum_probs=69.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..++.++ +. +..+|+..|+. . .-... .... ...+...+-.|+
T Consensus 67 ~~~VLDvGcG~G~~~~~la--------~~--------g~~~v~gvD~s-~-~l~~a------~~~~-~~~~~~~~v~~~- 120 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAA--------KA--------GARKVIGIECS-S-ISDYA------VKIV-KANKLDHVVTII- 120 (349)
T ss_dssp TCEEEEESCTTSHHHHHHH--------HT--------TCSEEEEEECS-T-HHHHH------HHHH-HHTTCTTTEEEE-
T ss_pred CCEEEEEeccchHHHHHHH--------HC--------CCCEEEEECcH-H-HHHHH------HHHH-HHcCCCCcEEEE-
Confidence 5799999999999888776 21 23689999975 2 11111 0111 112221112333
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++.+..+|++++|+|+|....+++...+ ++..+|..+.+-|+|||+++.
T Consensus 121 --~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~--------------------------~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 121 --KGKVEEVELPVEKVDIIISEWMGYCLFYES--------------------------MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp --ESCTTTCCCSSSCEEEEEECCCBBTBTBTC--------------------------CHHHHHHHHHHHEEEEEEEES
T ss_pred --ECcHHHccCCCCceEEEEEccccccccCch--------------------------hHHHHHHHHHHhCCCCCEEcc
Confidence 367777778889999999987666554322 344689999999999999973
No 118
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.41 E-value=3.4e-07 Score=80.95 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=66.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+++ . .|..+++..|+.. ......++ ..+. .+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~--------~-------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~--~~ 91 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASN--------L-------MPNGRIFALERNP-----------QYLGFIRDNLKKFVA--RN 91 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------H-------CTTSEEEEEECCH-----------HHHHHHHHHHHHHTC--TT
T ss_pred CCCEEEEECCCCCHHHHHHHH--------H-------CCCCEEEEEeCCH-----------HHHHHHHHHHHHhCC--Cc
Confidence 357999999999999888762 2 1457899999742 11111211 1222 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
+- .+.+++.+.+.+..++|++++..+++ +...+|+.-.+-|+|||+
T Consensus 92 v~--~~~~d~~~~~~~~~~~D~i~~~~~~~--------------------------------~~~~~l~~~~~~LkpgG~ 137 (204)
T 3e05_A 92 VT--LVEAFAPEGLDDLPDPDRVFIGGSGG--------------------------------MLEEIIDAVDRRLKSEGV 137 (204)
T ss_dssp EE--EEECCTTTTCTTSCCCSEEEESCCTT--------------------------------CHHHHHHHHHHHCCTTCE
T ss_pred EE--EEeCChhhhhhcCCCCCEEEECCCCc--------------------------------CHHHHHHHHHHhcCCCeE
Confidence 21 22356655555557899999976654 123488888999999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
+++...
T Consensus 138 l~~~~~ 143 (204)
T 3e05_A 138 IVLNAV 143 (204)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999764
No 119
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.36 E-value=1.8e-06 Score=74.85 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=64.1
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+...+|+|+|||+|..|+.++ ++ ..+|+..|+.. ...+..++ ..+. .+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la--------~~---------~~~v~~vD~s~-----------~~l~~a~~~~~~~~~-~~ 71 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLA--------GL---------SKKVYAFDVQE-----------QALGKTSQRLSDLGI-EN 71 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHH--------TT---------SSEEEEEESCH-----------HHHHHHHHHHHHHTC-CC
T ss_pred CCCCEEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEECCH-----------HHHHHHHHHHHHcCC-Cc
Confidence 345799999999999999876 11 37888889742 12222211 1222 12
Q ss_pred CeEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 126 PCFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 126 ~~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
-.|+. +++.... ++++++|+++++ ++|+......+.. ...+...+|+.-.+-|+||
T Consensus 72 v~~~~---~~~~~l~~~~~~~fD~v~~~--~~~~~~~~~~~~~------------------~~~~~~~~l~~~~~~Lkpg 128 (185)
T 3mti_A 72 TELIL---DGHENLDHYVREPIRAAIFN--LGYLPSADKSVIT------------------KPHTTLEAIEKILDRLEVG 128 (185)
T ss_dssp EEEEE---SCGGGGGGTCCSCEEEEEEE--EC-----------------------------CHHHHHHHHHHHHHHEEEE
T ss_pred EEEEe---CcHHHHHhhccCCcCEEEEe--CCCCCCcchhccc------------------ChhhHHHHHHHHHHhcCCC
Confidence 23333 4443321 457899999876 3444321111100 0234445777888999999
Q ss_pred ceEEEEEecC
Q 036911 205 GHVLLSIIGN 214 (359)
Q Consensus 205 G~l~~~~~g~ 214 (359)
|++++.....
T Consensus 129 G~l~i~~~~~ 138 (185)
T 3mti_A 129 GRLAIMIYYG 138 (185)
T ss_dssp EEEEEEEC--
T ss_pred cEEEEEEeCC
Confidence 9999987643
No 120
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.35 E-value=1.4e-06 Score=80.50 Aligned_cols=121 Identities=20% Similarity=0.249 Sum_probs=79.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+. +. .+ +++..|+.. ......+. ..+. .-
T Consensus 120 ~~~~VLDiGcG~G~l~~~la--------~~-------g~--~v~gvDi~~-----------~~v~~a~~n~~~~~~--~v 169 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAE--------KL-------GG--KALGVDIDP-----------MVLPQAEANAKRNGV--RP 169 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT-------TC--EEEEEESCG-----------GGHHHHHHHHHHTTC--CC
T ss_pred CCCEEEEecCCCcHHHHHHH--------Hh-------CC--eEEEEECCH-----------HHHHHHHHHHHHcCC--cE
Confidence 35799999999999887654 21 12 888888742 11121211 1121 11
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.+ +.+++... +|++++|+++++...|++. .++..-.+-|+|||+
T Consensus 170 ~~---~~~d~~~~-~~~~~fD~Vv~n~~~~~~~--------------------------------~~l~~~~~~LkpgG~ 213 (254)
T 2nxc_A 170 RF---LEGSLEAA-LPFGPFDLLVANLYAELHA--------------------------------ALAPRYREALVPGGR 213 (254)
T ss_dssp EE---EESCHHHH-GGGCCEEEEEEECCHHHHH--------------------------------HHHHHHHHHEEEEEE
T ss_pred EE---EECChhhc-CcCCCCCEEEECCcHHHHH--------------------------------HHHHHHHHHcCCCCE
Confidence 22 23455442 5778999999987666532 377777889999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
++++.+... +.+++.+.+++.| |++.+...
T Consensus 214 lils~~~~~------------------------------------------~~~~v~~~l~~~G-f~~~~~~~ 243 (254)
T 2nxc_A 214 ALLTGILKD------------------------------------------RAPLVREAMAGAG-FRPLEEAA 243 (254)
T ss_dssp EEEEEEEGG------------------------------------------GHHHHHHHHHHTT-CEEEEEEE
T ss_pred EEEEeeccC------------------------------------------CHHHHHHHHHHCC-CEEEEEec
Confidence 999764321 2568888888888 88877644
No 121
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.34 E-value=3.2e-06 Score=82.61 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=69.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..++.++ +. .. .+|+..|+. + .-...+ ... +..+...+-.++
T Consensus 63 ~~~~VLDlGcGtG~ls~~la--------~~-------g~-~~V~gvD~s-~-~~~~a~------~~~-~~~~~~~~v~~~ 117 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSA--------QA-------GA-RKVYAVEAT-K-MADHAR------ALV-KANNLDHIVEVI 117 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHH--------HT-------TC-SEEEEEESS-T-THHHHH------HHH-HHTTCTTTEEEE
T ss_pred CCCEEEEeccCcCHHHHHHH--------hc-------CC-CEEEEEccH-H-HHHHHH------HHH-HHcCCCCeEEEE
Confidence 46799999999999888776 21 12 489999975 2 211111 111 122221112333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++.+..+| +++|+|+|....|++... .++..+|+.+.+-|+|||+|++
T Consensus 118 ---~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e--------------------------~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 118 ---EGSVEDISLP-EKVDVIISEWMGYFLLRE--------------------------SMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp ---ESCGGGCCCS-SCEEEEEECCCBTTBTTT--------------------------CTHHHHHHHHHHHEEEEEEEES
T ss_pred ---ECchhhcCcC-CcceEEEEcChhhcccch--------------------------HHHHHHHHHHHhhCCCCeEEEE
Confidence 3677666666 999999997777776532 2345689999999999999976
Q ss_pred EEe
Q 036911 210 SII 212 (359)
Q Consensus 210 ~~~ 212 (359)
...
T Consensus 168 ~~~ 170 (376)
T 3r0q_C 168 SHA 170 (376)
T ss_dssp SEE
T ss_pred ecC
Confidence 543
No 122
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.33 E-value=1.3e-06 Score=79.04 Aligned_cols=109 Identities=9% Similarity=0.170 Sum_probs=67.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. .+ .+++..|+.. ...+..++.......+ +
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~~-------~~-~~v~gvD~s~-----------~~l~~a~~~~~~~~~~--v 110 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECND-----------GVFQRLRDWAPRQTHK--V 110 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------TS-------CE-EEEEEEECCH-----------HHHHHHHHHGGGCSSE--E
T ss_pred CCCeEEEEeccCCHHHHHHH--------hc-------CC-CeEEEEcCCH-----------HHHHHHHHHHHhcCCC--e
Confidence 35799999999999888764 11 12 4788888742 2222222211100011 2
Q ss_pred ecccCCcccC--CCCCCceeEEEe-cccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 130 AGIPGSFYGR--LFPNKSLHFVHS-SYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 130 ~~v~gsFy~~--lfp~~S~d~~~S-~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
..+.+++.+. .++++++|+|++ .+++++ .... ..++..+|+.-++-|+|||+
T Consensus 111 ~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~------------------------~~~~~~~l~~~~r~LkpgG~ 165 (236)
T 1zx0_A 111 IPLKGLWEDVAPTLPDGHFDGILYDTYPLSE-ETWH------------------------THQFNFIKNHAFRLLKPGGV 165 (236)
T ss_dssp EEEESCHHHHGGGSCTTCEEEEEECCCCCBG-GGTT------------------------THHHHHHHHTHHHHEEEEEE
T ss_pred EEEecCHHHhhcccCCCceEEEEECCcccch-hhhh------------------------hhhHHHHHHHHHHhcCCCeE
Confidence 2234677665 688899999999 666522 2211 12345678888999999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
|++..+
T Consensus 166 l~~~~~ 171 (236)
T 1zx0_A 166 LTYCNL 171 (236)
T ss_dssp EEECCH
T ss_pred EEEEec
Confidence 987643
No 123
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.30 E-value=1.6e-06 Score=79.34 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=65.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCC-eE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGP-CF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~-~f 128 (359)
...+|+|+|||+|..++.++ +. .|...++..|+... .-...+ .....++........+ .|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~GiDis~~-~l~~A~---~~~~~l~~~~~~~~~nv~~ 106 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELS--------PL-------FPDTLILGLEIRVK-VSDYVQ---DRIRALRAAPAGGFQNIAC 106 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHG--------GG-------STTSEEEEEESCHH-HHHHHH---HHHHHHHHSTTCCCTTEEE
T ss_pred CCCeEEEEccCCcHHHHHHH--------HH-------CCCCeEEEEECCHH-HHHHHH---HHHHHHHHHHhcCCCeEEE
Confidence 46799999999999988776 22 25688999997421 000000 0000010000011123 33
Q ss_pred EecccCCccc---CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 129 IAGIPGSFYG---RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 129 ~~~v~gsFy~---~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
+. ++... ..|+++++|.+++++.-.|..+.-. +.. -....||+.-++-|+|||
T Consensus 107 ~~---~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~-----------krr----------~~~~~~l~~~~~~LkpGG 162 (235)
T 3ckk_A 107 LR---SNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKH-----------KWR----------IISPTLLAEYAYVLRVGG 162 (235)
T ss_dssp EE---CCTTTCHHHHCCTTCEEEEEEESCC--------------------------------CCCHHHHHHHHHHEEEEE
T ss_pred EE---CcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhh-----------hhh----------hhhHHHHHHHHHHCCCCC
Confidence 33 45443 2378999999998877777432100 000 011358888899999999
Q ss_pred eEEEEE
Q 036911 206 HVLLSI 211 (359)
Q Consensus 206 ~l~~~~ 211 (359)
.+++.+
T Consensus 163 ~l~~~t 168 (235)
T 3ckk_A 163 LVYTIT 168 (235)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 124
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.29 E-value=3.1e-06 Score=83.11 Aligned_cols=106 Identities=15% Similarity=0.077 Sum_probs=72.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+. +. ..+|+..|... ...+..+. ..+. ..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la--------~~---------g~~V~gvDis~-----------~al~~A~~n~~~~~~--~v 282 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLA--------RM---------GAEVVGVEDDL-----------ASVLSLQKGLEANAL--KA 282 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHH--------HT---------TCEEEEEESBH-----------HHHHHHHHHHHHTTC--CC
T ss_pred CCCEEEEEeeeCCHHHHHHH--------Hc---------CCEEEEEECCH-----------HHHHHHHHHHHHcCC--Ce
Confidence 35799999999999999886 21 25888888631 11111211 1221 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+ .+++...+.+++++|+|+|+..+||..... ..+...|++.-.+-|+|||+
T Consensus 283 ~~~---~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~------------------------~~~~~~~l~~~~~~LkpGG~ 335 (381)
T 3dmg_A 283 QAL---HSDVDEALTEEARFDIIVTNPPFHVGGAVI------------------------LDVAQAFVNVAAARLRPGGV 335 (381)
T ss_dssp EEE---ECSTTTTSCTTCCEEEEEECCCCCTTCSSC------------------------CHHHHHHHHHHHHHEEEEEE
T ss_pred EEE---EcchhhccccCCCeEEEEECCchhhccccc------------------------HHHHHHHHHHHHHhcCcCcE
Confidence 333 367777677779999999999999854432 23455789998999999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
++++..
T Consensus 336 l~iv~n 341 (381)
T 3dmg_A 336 FFLVSN 341 (381)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999863
No 125
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.28 E-value=3.2e-06 Score=75.85 Aligned_cols=103 Identities=9% Similarity=0.047 Sum_probs=60.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|..+.+.+ +..+|+..|+... . +....+..+. . .+-.++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~---------------~~~~V~gvD~s~~---~----l~~~~~~a~~-~---~~v~~~ 110 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIV---------------DEGIIYAVEYSAK---P----FEKLLELVRE-R---NNIIPL 110 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHT---------------TTSEEEEECCCHH---H----HHHHHHHHHH-C---SSEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHc---------------CCCEEEEEECCHH---H----HHHHHHHHhc-C---CCeEEE
Confidence 35799999999999888776322 2368999997421 0 0001111111 1 012233
Q ss_pred ecccCCcccC---CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 130 AGIPGSFYGR---LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 130 ~~v~gsFy~~---lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
. ++.... ....+++|+++++.+- | .+...+|+.-++-|||||+
T Consensus 111 ~---~d~~~~~~~~~~~~~fD~V~~~~~~------~-------------------------~~~~~~l~~~~r~LkpgG~ 156 (210)
T 1nt2_A 111 L---FDASKPWKYSGIVEKVDLIYQDIAQ------K-------------------------NQIEILKANAEFFLKEKGE 156 (210)
T ss_dssp C---SCTTCGGGTTTTCCCEEEEEECCCS------T-------------------------THHHHHHHHHHHHEEEEEE
T ss_pred E---cCCCCchhhcccccceeEEEEeccC------h-------------------------hHHHHHHHHHHHHhCCCCE
Confidence 3 344331 2234899999997311 1 1122467788999999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
+++++.
T Consensus 157 l~i~~~ 162 (210)
T 1nt2_A 157 VVIMVK 162 (210)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999964
No 126
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.27 E-value=2.1e-06 Score=77.27 Aligned_cols=90 Identities=10% Similarity=0.039 Sum_probs=57.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..++ +. ..+|+..|+.. ...+..+... .+-.|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~-----------~~~~~a~~~~---~~~~~~ 96 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFG--------PQ---------AARWAAYDFSP-----------ELLKLARANA---PHADVY 96 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHG--------GG---------SSEEEEEESCH-----------HHHHHHHHHC---TTSEEE
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCEEEEEECCH-----------HHHHHHHHhC---CCceEE
Confidence 45799999999999888775 21 26788888742 1222222221 123344
Q ss_pred ecccCCcc-cCCCC-CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 130 AGIPGSFY-GRLFP-NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 130 ~~v~gsFy-~~lfp-~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
. +++. ...++ ++++|+|+|+ .+.+ .+|+...+-|+|||++
T Consensus 97 ~---~d~~~~~~~~~~~~fD~v~~~------~~~~-----------------------------~~l~~~~~~LkpgG~l 138 (226)
T 3m33_A 97 E---WNGKGELPAGLGAPFGLIVSR------RGPT-----------------------------SVILRLPELAAPDAHF 138 (226)
T ss_dssp E---CCSCSSCCTTCCCCEEEEEEE------SCCS-----------------------------GGGGGHHHHEEEEEEE
T ss_pred E---cchhhccCCcCCCCEEEEEeC------CCHH-----------------------------HHHHHHHHHcCCCcEE
Confidence 4 4663 34466 8899999997 1111 1555668899999999
Q ss_pred E
Q 036911 208 L 208 (359)
Q Consensus 208 ~ 208 (359)
+
T Consensus 139 ~ 139 (226)
T 3m33_A 139 L 139 (226)
T ss_dssp E
T ss_pred E
Confidence 8
No 127
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.27 E-value=2.5e-06 Score=75.43 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=65.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..+..+.+. ..+++..|... ......++. .+. .+
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-----------------~~~v~~vD~~~-----------~~~~~a~~~~~~~~~--~~ 126 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-----------------VQHVCSVERIK-----------GLQWQARRRLKNLDL--HN 126 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-----------------SSEEEEEESCH-----------HHHHHHHHHHHHTTC--CS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-----------------CCEEEEEecCH-----------HHHHHHHHHHHHcCC--Cc
Confidence 4679999999999999877622 15778788641 111212111 121 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
+ ..+.++..+.+.+.+++|+++++.++||+.+ .-.+-|+|||+
T Consensus 127 v--~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~-----------------------------------~~~~~L~pgG~ 169 (210)
T 3lbf_A 127 V--STRHGDGWQGWQARAPFDAIIVTAAPPEIPT-----------------------------------ALMTQLDEGGI 169 (210)
T ss_dssp E--EEEESCGGGCCGGGCCEEEEEESSBCSSCCT-----------------------------------HHHHTEEEEEE
T ss_pred e--EEEECCcccCCccCCCccEEEEccchhhhhH-----------------------------------HHHHhcccCcE
Confidence 2 2233677776677789999999999998543 22677999999
Q ss_pred EEEEEec
Q 036911 207 VLLSIIG 213 (359)
Q Consensus 207 l~~~~~g 213 (359)
+++++..
T Consensus 170 lv~~~~~ 176 (210)
T 3lbf_A 170 LVLPVGE 176 (210)
T ss_dssp EEEEECS
T ss_pred EEEEEcC
Confidence 9999876
No 128
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.25 E-value=5.6e-06 Score=76.06 Aligned_cols=99 Identities=18% Similarity=0.220 Sum_probs=66.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+.+.+ |..+++..|+.. ......++. .. +..|+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~-----------~~~~~a~~~-~~--~~~~~ 135 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL---------------PEITTFGLDVSK-----------VAIKAAAKR-YP--QVTFC 135 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC---------------TTSEEEEEESCH-----------HHHHHHHHH-CT--TSEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC---------------CCCeEEEEeCCH-----------HHHHHHHHh-CC--CcEEE
Confidence 45799999999999998776221 346888888742 111212211 11 12343
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
. +++....++++++|+|+++.+ |. +|+.-.+-|+|||++++
T Consensus 136 ~---~d~~~~~~~~~~fD~v~~~~~-------~~-----------------------------~l~~~~~~L~pgG~l~~ 176 (269)
T 1p91_A 136 V---ASSHRLPFSDTSMDAIIRIYA-------PC-----------------------------KAEELARVVKPGGWVIT 176 (269)
T ss_dssp E---CCTTSCSBCTTCEEEEEEESC-------CC-----------------------------CHHHHHHHEEEEEEEEE
T ss_pred E---cchhhCCCCCCceeEEEEeCC-------hh-----------------------------hHHHHHHhcCCCcEEEE
Confidence 3 466666688899999998654 21 34566888999999999
Q ss_pred EEecCCC
Q 036911 210 SIIGNDR 216 (359)
Q Consensus 210 ~~~g~~~ 216 (359)
..++.+.
T Consensus 177 ~~~~~~~ 183 (269)
T 1p91_A 177 ATPGPRH 183 (269)
T ss_dssp EEECTTT
T ss_pred EEcCHHH
Confidence 9987765
No 129
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.24 E-value=2.5e-06 Score=82.33 Aligned_cols=105 Identities=14% Similarity=0.160 Sum_probs=64.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+. ..-.. ..... ...+...+-.+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~gvD~s--~~~~~------a~~~~-~~~~~~~~i~~- 117 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------KA--------GAKKVLGVDQS--EILYQ------AMDII-RLNKLEDTITL- 117 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESS--THHHH------HHHHH-HHTTCTTTEEE-
T ss_pred CCCEEEEeeccCcHHHHHHH--------Hc--------CCCEEEEEChH--HHHHH------HHHHH-HHcCCCCcEEE-
Confidence 35799999999999887665 21 22588888974 11111 01111 11222112223
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+.+++.+..+|++++|+++|....+-+.. ..++..+|..+.+-|+|||+++
T Consensus 118 --~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~--------------------------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 118 --IKGKIEEVHLPVEKVDVIISEWMGYFLLF--------------------------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp --EESCTTTSCCSCSCEEEEEECCCBTTBTT--------------------------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred --EEeeHHHhcCCCCcEEEEEEcCchhhccC--------------------------HHHHHHHHHHHHhhcCCCcEEE
Confidence 33677666778899999999652111111 1234568999999999999998
No 130
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.23 E-value=4.7e-06 Score=74.72 Aligned_cols=99 Identities=16% Similarity=0.053 Sum_probs=63.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+.+.. .+++..|... ......+.......+-.+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~-----------------~~v~~vD~~~-----------~~~~~a~~~~~~~~~v~~- 120 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV-----------------DKVVSVEINE-----------KMYNYASKLLSYYNNIKL- 120 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-----------------SEEEEEESCH-----------HHHHHHHHHHTTCSSEEE-
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc-----------------CEEEEEeCCH-----------HHHHHHHHHHhhcCCeEE-
Confidence 35799999999999998776221 4677777631 122222222111101123
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++...+.+++++|+|++..++|++.+ .-.+-|+|||++++
T Consensus 121 --~~~d~~~~~~~~~~fD~v~~~~~~~~~~~-----------------------------------~~~~~L~pgG~l~~ 163 (231)
T 1vbf_A 121 --ILGDGTLGYEEEKPYDRVVVWATAPTLLC-----------------------------------KPYEQLKEGGIMIL 163 (231)
T ss_dssp --EESCGGGCCGGGCCEEEEEESSBBSSCCH-----------------------------------HHHHTEEEEEEEEE
T ss_pred --EECCcccccccCCCccEEEECCcHHHHHH-----------------------------------HHHHHcCCCcEEEE
Confidence 33566554445789999999999988532 23668999999999
Q ss_pred EEecC
Q 036911 210 SIIGN 214 (359)
Q Consensus 210 ~~~g~ 214 (359)
.....
T Consensus 164 ~~~~~ 168 (231)
T 1vbf_A 164 PIGVG 168 (231)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 97543
No 131
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.22 E-value=9.6e-06 Score=72.60 Aligned_cols=123 Identities=10% Similarity=-0.002 Sum_probs=70.1
Q ss_pred CCcceEEeecCC-CCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCC
Q 036911 49 PECLKIADLGCS-SGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNF 124 (359)
Q Consensus 49 ~~~~~IaDlGCs-~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~ 124 (359)
+...+|+|+||| +|..++.+.+.. ..+|+..|+.. ......+. ..+.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~-- 104 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF----------------NCKVTATEVDE-----------EFFEYARRNIERNNS-- 104 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH----------------CCEEEEEECCH-----------HHHHHHHHHHHHTTC--
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc----------------CCEEEEEECCH-----------HHHHHHHHHHHHhCC--
Confidence 346799999999 999998776321 26788888742 11111211 1121
Q ss_pred CCeEEecccCCcc-cCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 125 GPCFIAGIPGSFY-GRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 125 ~~~f~~~v~gsFy-~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
+-.++. ++.. -..++++++|+|+++-..+|...... .+ . .-...+..........||+.-.+-|+|
T Consensus 105 ~v~~~~---~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~--~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~Lkp 171 (230)
T 3evz_A 105 NVRLVK---SNGGIIKGVVEGTFDVIFSAPPYYDKPLGRV--LT-------E-REAIGGGKYGEEFSVKLLEEAFDHLNP 171 (230)
T ss_dssp CCEEEE---CSSCSSTTTCCSCEEEEEECCCCC-------------------------CCSSSCHHHHHHHHHHGGGEEE
T ss_pred CcEEEe---CCchhhhhcccCceeEEEECCCCcCCccccc--cC-------h-hhhhccCccchHHHHHHHHHHHHHhCC
Confidence 223433 3431 13456799999999888777555111 00 0 000111112245567899998999999
Q ss_pred CceEEEEEec
Q 036911 204 GGHVLLSIIG 213 (359)
Q Consensus 204 GG~l~~~~~g 213 (359)
||++++.+..
T Consensus 172 gG~l~~~~~~ 181 (230)
T 3evz_A 172 GGKVALYLPD 181 (230)
T ss_dssp EEEEEEEEES
T ss_pred CeEEEEEecc
Confidence 9999998743
No 132
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.22 E-value=7.9e-07 Score=79.43 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=67.4
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+.+.+|+|+|||+|+.++.++ ...|..+++..|... ...+..+. ..|.. .
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~---------------~~~p~a~~~A~Di~~-----------~~leiar~~~~~~g~~-~ 100 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQW---------------NENEKIIYHAYDIDR-----------AEIAFLSSIIGKLKTT-I 100 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHH---------------CSSCCCEEEEECSCH-----------HHHHHHHHHHHHSCCS-S
T ss_pred CCCCeEEEecCCCCHHHHHHH---------------hcCCCCEEEEEeCCH-----------HHHHHHHHHHHhcCCC-c
Confidence 457899999999999999886 124678999999742 12222221 12221 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
++-+ .+.-.. .|++++|++.++..||-|.+.+..+. .-.+.|+|||
T Consensus 101 ~v~~----~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~-----------------------------~v~~~L~pgg 146 (200)
T 3fzg_A 101 KYRF----LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNIL-----------------------------DFLQLFHTQN 146 (200)
T ss_dssp EEEE----ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHH-----------------------------HHHHTCEEEE
T ss_pred cEEE----eccccc-CCCCCcChhhHhhHHHhhhhhHHHHH-----------------------------HHHHHhCCCC
Confidence 2222 233333 68899999999999999966444222 4578899997
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
.+ +++.
T Consensus 147 vf-ISfp 152 (200)
T 3fzg_A 147 FV-ISFP 152 (200)
T ss_dssp EE-EEEE
T ss_pred EE-EEeC
Confidence 65 6776
No 133
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.21 E-value=1.6e-06 Score=78.98 Aligned_cols=108 Identities=7% Similarity=0.084 Sum_probs=61.5
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC-CCCCCe
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG-SNFGPC 127 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~-~~~~~~ 127 (359)
+...+|||+|||+|.++..+. +. .| .+++.-|+. |...+..++... ......
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~--------~~-------~~-~~v~~id~~-----------~~~~~~a~~~~~~~~~~~~ 111 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECN-----------DGVFQRLRDWAPRQTHKVI 111 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHT--------TS-------CE-EEEEEEECC-----------HHHHHHHHHHGGGCSSEEE
T ss_pred cCCCeEEEECCCccHHHHHHH--------Hh-------CC-cEEEEEeCC-----------HHHHHHHHHHHhhCCCceE
Confidence 345899999999999887664 21 24 467777863 222222222111 111122
Q ss_pred EEecccCCcc--cCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 128 FIAGIPGSFY--GRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 128 f~~~v~gsFy--~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
++. |+.. ...+|++++|.++.-........ . ...|...||+.-++-|||||
T Consensus 112 ~~~---~~a~~~~~~~~~~~FD~i~~D~~~~~~~~--~----------------------~~~~~~~~~~e~~rvLkPGG 164 (236)
T 3orh_A 112 PLK---GLWEDVAPTLPDGHFDGILYDTYPLSEET--W----------------------HTHQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp EEE---SCHHHHGGGSCTTCEEEEEECCCCCBGGG--T----------------------TTHHHHHHHHTHHHHEEEEE
T ss_pred EEe---ehHHhhcccccccCCceEEEeeeecccch--h----------------------hhcchhhhhhhhhheeCCCC
Confidence 222 3332 33578899999974221111000 0 02345568888899999999
Q ss_pred eEEEE
Q 036911 206 HVLLS 210 (359)
Q Consensus 206 ~l~~~ 210 (359)
+|++.
T Consensus 165 ~l~f~ 169 (236)
T 3orh_A 165 VLTYC 169 (236)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99764
No 134
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.19 E-value=1.3e-06 Score=85.55 Aligned_cols=110 Identities=14% Similarity=0.074 Sum_probs=67.3
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..++.++ +. .|..+|+..|... ......+. ..+.. ...
T Consensus 223 ~~~VLDlGcG~G~~s~~la--------~~-------~p~~~V~gvD~s~-----------~al~~Ar~n~~~ngl~-~~~ 275 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL--------DK-------NPQAKVVFVDESP-----------MAVASSRLNVETNMPE-ALD 275 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEESCH-----------HHHHHHHHHHHHHCGG-GGG
T ss_pred CCeEEEEeCcchHHHHHHH--------HH-------CCCCEEEEEECcH-----------HHHHHHHHHHHHcCCC-cCc
Confidence 4799999999999998887 22 1558899999741 11111111 11210 000
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
-+..+.++++. .++++++|+|+|+-.+|+...++... ...||+.-.+-|+|||++
T Consensus 276 ~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~------------------------~~~~l~~~~~~LkpgG~l 330 (375)
T 4dcm_A 276 RCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNV------------------------AWEMFHHARRCLKINGEL 330 (375)
T ss_dssp GEEEEECSTTT-TCCTTCEEEEEECCCC-------CCH------------------------HHHHHHHHHHHEEEEEEE
T ss_pred eEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHH------------------------HHHHHHHHHHhCCCCcEE
Confidence 11122356665 56888999999999999855544322 225888888999999999
Q ss_pred EEEEe
Q 036911 208 LLSII 212 (359)
Q Consensus 208 ~~~~~ 212 (359)
+++..
T Consensus 331 ~iv~n 335 (375)
T 4dcm_A 331 YIVAN 335 (375)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99763
No 135
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.19 E-value=3.5e-06 Score=76.57 Aligned_cols=98 Identities=12% Similarity=0.016 Sum_probs=63.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+.. . .|..+|+..|... .....++. ..+. .+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~--------~-------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~--~~ 121 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKI--------C-------FPHLHVTIVDSLN-----------KRITFLEKLSEALQL--EN 121 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHH--------H-------CTTCEEEEEESCH-----------HHHHHHHHHHHHHTC--SS
T ss_pred CCCEEEEecCCCCHHHHHHHH--------h-------CCCCEEEEEeCCH-----------HHHHHHHHHHHHcCC--CC
Confidence 457999999999999998762 1 2457899999742 11111211 1222 12
Q ss_pred eEEecccCCcccCCCC---CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 127 CFIAGIPGSFYGRLFP---NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp---~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
+ ..+.+++.+..++ ++++|+|+|... .++..+++.-.+-|+|
T Consensus 122 v--~~~~~d~~~~~~~~~~~~~fD~V~~~~~---------------------------------~~~~~~l~~~~~~Lkp 166 (240)
T 1xdz_A 122 T--TFCHDRAETFGQRKDVRESYDIVTARAV---------------------------------ARLSVLSELCLPLVKK 166 (240)
T ss_dssp E--EEEESCHHHHTTCTTTTTCEEEEEEECC---------------------------------SCHHHHHHHHGGGEEE
T ss_pred E--EEEeccHHHhcccccccCCccEEEEecc---------------------------------CCHHHHHHHHHHhcCC
Confidence 2 2234676655543 689999998541 1244588888899999
Q ss_pred CceEEEE
Q 036911 204 GGHVLLS 210 (359)
Q Consensus 204 GG~l~~~ 210 (359)
||++++.
T Consensus 167 gG~l~~~ 173 (240)
T 1xdz_A 167 NGLFVAL 173 (240)
T ss_dssp EEEEEEE
T ss_pred CCEEEEE
Confidence 9999886
No 136
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.19 E-value=2.5e-06 Score=73.40 Aligned_cols=99 Identities=18% Similarity=0.198 Sum_probs=62.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..++ +. - .+++..|... ......+. ..+...+-
T Consensus 33 ~~~~vldiG~G~G~~~~~l~--------~~--------~-~~v~~~D~~~-----------~~~~~a~~~~~~~~~~~~~ 84 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELA--------GR--------V-RRVYAIDRNP-----------EAISTTEMNLQRHGLGDNV 84 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------TT--------S-SEEEEEESCH-----------HHHHHHHHHHHHTTCCTTE
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------c-CEEEEEECCH-----------HHHHHHHHHHHHcCCCcce
Confidence 45799999999999888775 21 1 5778888631 11111111 11211111
Q ss_pred eEEecccCCcccCCCCC-CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRLFPN-KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~-~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.+. .+++.. .++. +++|+++++..+|++ ..+|+.-.+-|+|||
T Consensus 85 ~~~---~~d~~~-~~~~~~~~D~v~~~~~~~~~--------------------------------~~~l~~~~~~l~~gG 128 (192)
T 1l3i_A 85 TLM---EGDAPE-ALCKIPDIDIAVVGGSGGEL--------------------------------QEILRIIKDKLKPGG 128 (192)
T ss_dssp EEE---ESCHHH-HHTTSCCEEEEEESCCTTCH--------------------------------HHHHHHHHHTEEEEE
T ss_pred EEE---ecCHHH-hcccCCCCCEEEECCchHHH--------------------------------HHHHHHHHHhcCCCc
Confidence 232 345544 3444 689999997665542 248888899999999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
++++...
T Consensus 129 ~l~~~~~ 135 (192)
T 1l3i_A 129 RIIVTAI 135 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998874
No 137
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.19 E-value=5.8e-06 Score=73.30 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=63.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. .|..+++..|... ......++ ..+.. +-
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~-~v 130 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIV--------------GEDGLVVSIERIP-----------ELAEKAERTLRKLGYD-NV 130 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEEESCH-----------HHHHHHHHHHHHHTCT-TE
T ss_pred CCCEEEEECCCccHHHHHHHHHh--------------CCCCEEEEEeCCH-----------HHHHHHHHHHHHcCCC-Ce
Confidence 35799999999999998877332 1346888888642 11111111 11211 11
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.+. .+++...+.+++++|+++++.++|++.+ .-.+-|+|||+
T Consensus 131 ~~~---~~d~~~~~~~~~~fD~v~~~~~~~~~~~-----------------------------------~~~~~L~pgG~ 172 (215)
T 2yxe_A 131 IVI---VGDGTLGYEPLAPYDRIYTTAAGPKIPE-----------------------------------PLIRQLKDGGK 172 (215)
T ss_dssp EEE---ESCGGGCCGGGCCEEEEEESSBBSSCCH-----------------------------------HHHHTEEEEEE
T ss_pred EEE---ECCcccCCCCCCCeeEEEECCchHHHHH-----------------------------------HHHHHcCCCcE
Confidence 232 3565433333689999999999998542 23678999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
+++.+.
T Consensus 173 lv~~~~ 178 (215)
T 2yxe_A 173 LLMPVG 178 (215)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999874
No 138
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.18 E-value=3.3e-06 Score=73.61 Aligned_cols=108 Identities=15% Similarity=0.080 Sum_probs=68.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+.. ...+..+. ..+. .+-
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~--------~~--------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~-~~v 95 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEAL--------SR--------GAASVLFVESDQ-----------RSAAVIARNIEALGL-SGA 95 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEECCH-----------HHHHHHHHHHHHHTC-SCE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HC--------CCCeEEEEECCH-----------HHHHHHHHHHHHcCC-Cce
Confidence 35799999999999988765 11 225788889742 11111111 1221 122
Q ss_pred eEEecccCCcccCC--CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH--hhc
Q 036911 127 CFIAGIPGSFYGRL--FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE--EIL 202 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~--EL~ 202 (359)
.|+. +++.+.+ ++++++|+++++..+||.. .++..+|+...+ -|+
T Consensus 96 ~~~~---~d~~~~~~~~~~~~fD~i~~~~p~~~~~----------------------------~~~~~~l~~~~~~~~L~ 144 (189)
T 3p9n_A 96 TLRR---GAVAAVVAAGTTSPVDLVLADPPYNVDS----------------------------ADVDAILAALGTNGWTR 144 (189)
T ss_dssp EEEE---SCHHHHHHHCCSSCCSEEEECCCTTSCH----------------------------HHHHHHHHHHHHSSSCC
T ss_pred EEEE---ccHHHHHhhccCCCccEEEECCCCCcch----------------------------hhHHHHHHHHHhcCccC
Confidence 3433 5665433 4578999999987777631 134457766666 899
Q ss_pred cCceEEEEEecCCC
Q 036911 203 SGGHVLLSIIGNDR 216 (359)
Q Consensus 203 pGG~l~~~~~g~~~ 216 (359)
|||++++....+..
T Consensus 145 pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 145 EGTVAVVERATTCA 158 (189)
T ss_dssp TTCEEEEEEETTSC
T ss_pred CCeEEEEEecCCCC
Confidence 99999998876544
No 139
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.16 E-value=4.9e-06 Score=71.64 Aligned_cols=107 Identities=13% Similarity=0.153 Sum_probs=69.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCC-C
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNF-G 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~-~ 125 (359)
...+|+|+|||+|..+..++ +. ..+++..|+.. ......+.. .+... +
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~--------~~---------~~~v~~~D~~~-----------~~~~~a~~~~~~~~~~~~~ 103 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALA--------DE---------VKSTTMADINR-----------RAIKLAKENIKLNNLDNYD 103 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHG--------GG---------SSEEEEEESCH-----------HHHHHHHHHHHHTTCTTSC
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCeEEEEECCH-----------HHHHHHHHHHHHcCCCccc
Confidence 45799999999999888765 11 26788888742 111111111 12110 0
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.+ +.+++.. .++++++|+++++..+||- ..++..+|+.-.+-|+|||
T Consensus 104 ~~~---~~~d~~~-~~~~~~~D~v~~~~~~~~~----------------------------~~~~~~~l~~~~~~L~~gG 151 (194)
T 1dus_A 104 IRV---VHSDLYE-NVKDRKYNKIITNPPIRAG----------------------------KEVLHRIIEEGKELLKDNG 151 (194)
T ss_dssp EEE---EECSTTT-TCTTSCEEEEEECCCSTTC----------------------------HHHHHHHHHHHHHHEEEEE
T ss_pred eEE---EECchhc-ccccCCceEEEECCCcccc----------------------------hhHHHHHHHHHHHHcCCCC
Confidence 123 2356654 5567899999998888871 1234468888899999999
Q ss_pred eEEEEEecCCC
Q 036911 206 HVLLSIIGNDR 216 (359)
Q Consensus 206 ~l~~~~~g~~~ 216 (359)
++++.......
T Consensus 152 ~l~~~~~~~~~ 162 (194)
T 1dus_A 152 EIWVVIQTKQG 162 (194)
T ss_dssp EEEEEEESTHH
T ss_pred EEEEEECCCCC
Confidence 99999876543
No 140
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.15 E-value=5.5e-06 Score=75.49 Aligned_cols=101 Identities=17% Similarity=0.135 Sum_probs=65.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.+ .|..+++..|+.. ...+..++ ..+...+-
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~-----------~~~~~a~~~~~~~~~~~~v 147 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV--------------GPEGRVVSYEIRE-----------DFAKLAWENIKWAGFDDRV 147 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEECSCH-----------HHHHHHHHHHHHHTCTTTE
T ss_pred CCCEEEEecCCchHHHHHHHHHh--------------CCCeEEEEEecCH-----------HHHHHHHHHHHHcCCCCce
Confidence 35799999999999999887443 2458899999742 11111111 12221111
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.+ +.+++. ..++++++|++++. .|.. . .+|+.-.+-|+|||+
T Consensus 148 ~~---~~~d~~-~~~~~~~~D~v~~~--------~~~~-~-------------------------~~l~~~~~~L~~gG~ 189 (255)
T 3mb5_A 148 TI---KLKDIY-EGIEEENVDHVILD--------LPQP-E-------------------------RVVEHAAKALKPGGF 189 (255)
T ss_dssp EE---ECSCGG-GCCCCCSEEEEEEC--------SSCG-G-------------------------GGHHHHHHHEEEEEE
T ss_pred EE---EECchh-hccCCCCcCEEEEC--------CCCH-H-------------------------HHHHHHHHHcCCCCE
Confidence 23 346776 45888999999983 2321 1 267777899999999
Q ss_pred EEEEEec
Q 036911 207 VLLSIIG 213 (359)
Q Consensus 207 l~~~~~g 213 (359)
+++....
T Consensus 190 l~~~~~~ 196 (255)
T 3mb5_A 190 FVAYTPC 196 (255)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9987643
No 141
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.15 E-value=1.4e-05 Score=76.45 Aligned_cols=104 Identities=16% Similarity=0.217 Sum_probs=64.7
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..++.++ +. +..+|+..|+. . .-... .... ...+...+-.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~~vD~s-~-~~~~a------~~~~-~~~~~~~~i~~-- 91 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------KH--------GAKHVIGVDMS-S-IIEMA------KELV-ELNGFSDKITL-- 91 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT--------CCSEEEEEESS-T-HHHHH------HHHH-HHTTCTTTEEE--
T ss_pred CCEEEEecCccHHHHHHHH--------HC--------CCCEEEEEChH-H-HHHHH------HHHH-HHcCCCCCEEE--
Confidence 4699999999999887665 21 22588999974 2 21111 1111 11222111223
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
+.+++.+..+|++++|+++|....+.+.. ..++..+|..+.+-|+|||+++
T Consensus 92 -~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~--------------------------~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 92 -LRGKLEDVHLPFPKVDIIISEWMGYFLLY--------------------------ESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp -EESCTTTSCCSSSCEEEEEECCCBTTBST--------------------------TCCHHHHHHHHHHHEEEEEEEE
T ss_pred -EECchhhccCCCCcccEEEEeCchhhccc--------------------------HHHHHHHHHHHHhhcCCCeEEE
Confidence 33677666678789999999754443322 1234468999999999999997
No 142
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.13 E-value=1.6e-05 Score=74.28 Aligned_cols=127 Identities=8% Similarity=-0.035 Sum_probs=80.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|+.+++.. +. +|+..|+.. ...+.++. .++.. +.+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~---------------~~-~V~~vD~s~-----------~~~~~a~~n~~~n~~~-~~v 177 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYG---------------KA-KVIAIEKDP-----------YTFKFLVENIHLNKVE-DRM 177 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT---------------CC-EEEEECCCH-----------HHHHHHHHHHHHTTCT-TTE
T ss_pred CCEEEEecccCCHHHHHHHHhC---------------CC-EEEEEECCH-----------HHHHHHHHHHHHcCCC-ceE
Confidence 5799999999999999887321 22 789999842 11122221 12221 223
Q ss_pred -EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 128 -FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 128 -f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
|+. ++..+.+. ++++|++++. .|.... .||..-.+-|+|||+
T Consensus 178 ~~~~---~D~~~~~~-~~~fD~Vi~~--------~p~~~~-------------------------~~l~~~~~~LkpgG~ 220 (278)
T 2frn_A 178 SAYN---MDNRDFPG-ENIADRILMG--------YVVRTH-------------------------EFIPKALSIAKDGAI 220 (278)
T ss_dssp EEEC---SCTTTCCC-CSCEEEEEEC--------CCSSGG-------------------------GGHHHHHHHEEEEEE
T ss_pred EEEE---CCHHHhcc-cCCccEEEEC--------CchhHH-------------------------HHHHHHHHHCCCCeE
Confidence 444 56655444 7899999883 232111 267777889999999
Q ss_pred EEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 207 VLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 207 l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+++...+... . . .....+++...+++.| |++..++.
T Consensus 221 l~~~~~~~~~--~----------------------~------------~~~~~~~i~~~~~~~G-~~~~~~~~ 256 (278)
T 2frn_A 221 IHYHNTVPEK--L----------------------M------------PREPFETFKRITKEYG-YDVEKLNE 256 (278)
T ss_dssp EEEEEEEEGG--G----------------------T------------TTTTHHHHHHHHHHTT-CEEEEEEE
T ss_pred EEEEEeeccc--c----------------------c------------cccHHHHHHHHHHHcC-CeeEEeee
Confidence 9998876533 0 0 1123567788888888 78777544
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.13 E-value=1.8e-06 Score=75.76 Aligned_cols=133 Identities=11% Similarity=0.070 Sum_probs=68.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeE
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f 128 (359)
....+|+|+|||+|..+..+++.. |..+++..|+... .....+..... ...-
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~~~~-----------~~~~a~~~~~~--~~~~ 80 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC---------------PGVSVTAVDLSMD-----------ALAVARRNAER--FGAV 80 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC---------------TTEEEEEEECC------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC---------------CCCeEEEEECCHH-----------HHHHHHHHHHH--hCCc
Confidence 346899999999999988877321 4578999998432 11111110000 0001
Q ss_pred EecccCCcccCCCCC-----CceeEEEecccccccccCC---CCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHh
Q 036911 129 IAGIPGSFYGRLFPN-----KSLHFVHSSYSLHWLSQVP---EGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEE 200 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~-----~S~d~~~S~~alhWls~~p---~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~E 200 (359)
+..+.+++.+ .+++ +++|+++++-.+++..... ..+.. ........+.......+..|++.-.+-
T Consensus 81 ~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (215)
T 4dzr_A 81 VDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRD------YEPRLALDGGEDGLQFYRRMAALPPYV 153 (215)
T ss_dssp --CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------------CTTHHHHHHHTCCGGG
T ss_pred eEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhc------cCccccccCCCcHHHHHHHHHHHHHHH
Confidence 2233456655 5565 8999999987766544321 11110 000111111122244557899888999
Q ss_pred hccCceEEEEEecCCC
Q 036911 201 ILSGGHVLLSIIGNDR 216 (359)
Q Consensus 201 L~pGG~l~~~~~g~~~ 216 (359)
|+|||++++...+...
T Consensus 154 LkpgG~l~~~~~~~~~ 169 (215)
T 4dzr_A 154 LARGRAGVFLEVGHNQ 169 (215)
T ss_dssp BCSSSEEEEEECTTSC
T ss_pred hcCCCeEEEEEECCcc
Confidence 9999995555555433
No 144
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.11 E-value=6.3e-06 Score=77.39 Aligned_cols=49 Identities=4% Similarity=0.076 Sum_probs=36.6
Q ss_pred CCcccCCCC-CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 134 GSFYGRLFP-NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 134 gsFy~~lfp-~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
++..+..+| .+++|+|+|.+.|+|+.. + +....|+.-++-|+|||+|++
T Consensus 201 ~dl~~~~~~~~~~fDlI~crnvliyf~~-~--------------------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 201 VNLLEKQYNVPGPFDAIFCRNVMIYFDK-T--------------------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCTTCSSCCCCCCEEEEEECSSGGGSCH-H--------------------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred cccCCCCCCcCCCeeEEEECCchHhCCH-H--------------------------HHHHHHHHHHHHhCCCcEEEE
Confidence 344443354 578999999999999854 2 123578888999999999976
No 145
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.10 E-value=2.1e-05 Score=73.03 Aligned_cols=100 Identities=10% Similarity=0.126 Sum_probs=63.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh-CC-CCCCe
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK-GS-NFGPC 127 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~-~~-~~~~~ 127 (359)
...+|+|+|||+|..+..+++.+ .|..+++..|+.. ...+..+... .. ...++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~--------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~g~~~v 164 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYAL--------------NGKGTLTVVERDE-----------DNLKKAMDNLSEFYDIGNV 164 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------TTSSEEEEECSCH-----------HHHHHHHHHHHTTSCCTTE
T ss_pred CcCEEEEecCCCCHHHHHHHHHc--------------CCCCEEEEEECCH-----------HHHHHHHHHHHhcCCCCcE
Confidence 35799999999999998887443 2457899999742 1111121111 00 01222
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
- .+.+++.. .++++++|++++ | +|.. . .+|+.-.+-|+|||++
T Consensus 165 ~--~~~~d~~~-~~~~~~fD~Vi~----~----~~~~-~-------------------------~~l~~~~~~LkpgG~l 207 (275)
T 1yb2_A 165 R--TSRSDIAD-FISDQMYDAVIA----D----IPDP-W-------------------------NHVQKIASMMKPGSVA 207 (275)
T ss_dssp E--EECSCTTT-CCCSCCEEEEEE----C----CSCG-G-------------------------GSHHHHHHTEEEEEEE
T ss_pred E--EEECchhc-cCcCCCccEEEE----c----CcCH-H-------------------------HHHHHHHHHcCCCCEE
Confidence 2 23357755 677889999998 2 2321 1 2677778899999999
Q ss_pred EEEE
Q 036911 208 LLSI 211 (359)
Q Consensus 208 ~~~~ 211 (359)
+++.
T Consensus 208 ~i~~ 211 (275)
T 1yb2_A 208 TFYL 211 (275)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 146
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.09 E-value=1.3e-05 Score=71.74 Aligned_cols=102 Identities=14% Similarity=0.074 Sum_probs=63.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCC----
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGS---- 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~---- 122 (359)
...+|+|+|||+|..|..+.+.. .+..+|+..|+.. ......++ ..+.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 131 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMV--------------GCTGKVIGIDHIK-----------ELVDDSVNNVRKDDPTLLS 131 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHHCTHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHHh--------------CCCcEEEEEeCCH-----------HHHHHHHHHHHhhcccccC
Confidence 35799999999999998876332 1346888888742 11111111 1110
Q ss_pred CCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 123 NFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
..+-.++. ++......+++++|++++...++.+ ++.-.+-|+
T Consensus 132 ~~~v~~~~---~d~~~~~~~~~~fD~i~~~~~~~~~-----------------------------------~~~~~~~Lk 173 (226)
T 1i1n_A 132 SGRVQLVV---GDGRMGYAEEAPYDAIHVGAAAPVV-----------------------------------PQALIDQLK 173 (226)
T ss_dssp TSSEEEEE---SCGGGCCGGGCCEEEEEECSBBSSC-----------------------------------CHHHHHTEE
T ss_pred CCcEEEEE---CCcccCcccCCCcCEEEECCchHHH-----------------------------------HHHHHHhcC
Confidence 00122333 4555444557889999998777542 124467899
Q ss_pred cCceEEEEEecC
Q 036911 203 SGGHVLLSIIGN 214 (359)
Q Consensus 203 pGG~l~~~~~g~ 214 (359)
|||+|++++...
T Consensus 174 pgG~lv~~~~~~ 185 (226)
T 1i1n_A 174 PGGRLILPVGPA 185 (226)
T ss_dssp EEEEEEEEESCT
T ss_pred CCcEEEEEEecC
Confidence 999999987543
No 147
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.09 E-value=6.2e-06 Score=72.56 Aligned_cols=97 Identities=12% Similarity=-0.031 Sum_probs=62.7
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..+..++... |..+++..|... ......+. ..+. .++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~--~~v 117 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR---------------PEAHFTLLDSLG-----------KRVRFLRQVQHELKL--ENI 117 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC---------------TTSEEEEEESCH-----------HHHHHHHHHHHHTTC--SSE
T ss_pred CCeEEEECCCCCHHHHHHHHHC---------------CCCEEEEEeCCH-----------HHHHHHHHHHHHcCC--CCe
Confidence 4699999999999999887321 457899999742 11111211 1121 222
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
..+.+++... .|++++|++++... .++..+|+.-.+-|+|||++
T Consensus 118 --~~~~~d~~~~-~~~~~~D~i~~~~~---------------------------------~~~~~~l~~~~~~L~~gG~l 161 (207)
T 1jsx_A 118 --EPVQSRVEEF-PSEPPFDGVISRAF---------------------------------ASLNDMVSWCHHLPGEQGRF 161 (207)
T ss_dssp --EEEECCTTTS-CCCSCEEEEECSCS---------------------------------SSHHHHHHHHTTSEEEEEEE
T ss_pred --EEEecchhhC-CccCCcCEEEEecc---------------------------------CCHHHHHHHHHHhcCCCcEE
Confidence 2234566543 36789999998421 12345888888999999999
Q ss_pred EEEE
Q 036911 208 LLSI 211 (359)
Q Consensus 208 ~~~~ 211 (359)
++..
T Consensus 162 ~~~~ 165 (207)
T 1jsx_A 162 YALK 165 (207)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 148
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.09 E-value=4.3e-06 Score=72.84 Aligned_cols=118 Identities=16% Similarity=0.216 Sum_probs=67.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhh--ccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCe
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKR--LNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPC 127 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~--~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~ 127 (359)
...+|+|+|||+|..+..+++.. .. .....+..+|+..|+...- .++ .-.
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~--------~~~~~~~~~~~~~v~~vD~s~~~------~~~--------------~~~ 73 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKV--------NAAGTDPSSPVGFVLGVDLLHIF------PLE--------------GAT 73 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHT--------TTTCCCTTSCCCEEEEECSSCCC------CCT--------------TCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------ccccccccCCCceEEEEechhcc------cCC--------------CCe
Confidence 35799999999999998887332 00 0001123789999985310 000 112
Q ss_pred EEecccCCcccC--------CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 128 FIAGIPGSFYGR--------LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 128 f~~~v~gsFy~~--------lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
++ ..+++... .++++++|+|+|..++||.-... .+ . .........+|+.-.+
T Consensus 74 ~~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~---~~---------~------~~~~~~~~~~l~~~~~ 133 (196)
T 2nyu_A 74 FL--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRD---LD---------H------DRLISLCLTLLSVTPD 133 (196)
T ss_dssp EE--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHH---HH---------H------HHHHHHHHHHHHHHHH
T ss_pred EE--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcc---cC---------H------HHHHHHHHHHHHHHHH
Confidence 22 02344322 24567999999977666532100 00 0 0001112357778889
Q ss_pred hhccCceEEEEEecCC
Q 036911 200 EILSGGHVLLSIIGND 215 (359)
Q Consensus 200 EL~pGG~l~~~~~g~~ 215 (359)
-|+|||++++..+...
T Consensus 134 ~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 134 ILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HEEEEEEEEEEECCSG
T ss_pred HhcCCCEEEEEecCCc
Confidence 9999999999876443
No 149
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.09 E-value=6.1e-06 Score=74.66 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=61.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+.+.. + .+++..|... ......++ ..+. .+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~---------------~-~~v~~vD~~~-----------~~~~~a~~~~~~~~~--~~ 141 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIV---------------K-TDVYTIERIP-----------ELVEFAKRNLERAGV--KN 141 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH---------------C-SCEEEEESCH-----------HHHHHHHHHHHHTTC--CS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHh---------------C-CEEEEEeCCH-----------HHHHHHHHHHHHcCC--CC
Confidence 35699999999999998887332 3 5777778631 11111111 1121 12
Q ss_pred eEEecccCCcccCCCCCC-ceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRLFPNK-SLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~-S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
+- .+.+++ ...+++. .+|+|+++.++|++.+ .-.+-|+|||
T Consensus 142 v~--~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~~-----------------------------------~~~~~L~pgG 183 (235)
T 1jg1_A 142 VH--VILGDG-SKGFPPKAPYDVIIVTAGAPKIPE-----------------------------------PLIEQLKIGG 183 (235)
T ss_dssp EE--EEESCG-GGCCGGGCCEEEEEECSBBSSCCH-----------------------------------HHHHTEEEEE
T ss_pred cE--EEECCc-ccCCCCCCCccEEEECCcHHHHHH-----------------------------------HHHHhcCCCc
Confidence 21 233565 3445554 4999999999887432 2256799999
Q ss_pred eEEEEEecC
Q 036911 206 HVLLSIIGN 214 (359)
Q Consensus 206 ~l~~~~~g~ 214 (359)
++++.+...
T Consensus 184 ~lvi~~~~~ 192 (235)
T 1jg1_A 184 KLIIPVGSY 192 (235)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEecC
Confidence 999988643
No 150
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.09 E-value=7.7e-06 Score=73.77 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=63.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++.+ .|..+|+..|+... . +.......+. . .+-.|+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~--------------g~~~~v~gvD~s~~---~----i~~~~~~a~~-~---~~v~~~ 131 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIV--------------GPDGLVYAVEFSHR---S----GRDLINLAKK-R---TNIIPV 131 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTCEEEEECCCHH---H----HHHHHHHHHH-C---TTEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHh--------------CCCcEEEEEECCHH---H----HHHHHHHhhc-c---CCeEEE
Confidence 35799999999999999887433 23468888887421 0 0011111111 1 122333
Q ss_pred ecccCCccc---CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 130 AGIPGSFYG---RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 130 ~~v~gsFy~---~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
. +++.. ..++++++|++++..+ .|. ....++..-.+-|+|||+
T Consensus 132 ~---~d~~~~~~~~~~~~~~D~V~~~~~------~~~-------------------------~~~~~~~~~~~~LkpgG~ 177 (233)
T 2ipx_A 132 I---EDARHPHKYRMLIAMVDVIFADVA------QPD-------------------------QTRIVALNAHTFLRNGGH 177 (233)
T ss_dssp C---SCTTCGGGGGGGCCCEEEEEECCC------CTT-------------------------HHHHHHHHHHHHEEEEEE
T ss_pred E---cccCChhhhcccCCcEEEEEEcCC------Ccc-------------------------HHHHHHHHHHHHcCCCeE
Confidence 3 45544 2346789999999543 111 122467767899999999
Q ss_pred EEEEEec
Q 036911 207 VLLSIIG 213 (359)
Q Consensus 207 l~~~~~g 213 (359)
+++++..
T Consensus 178 l~i~~~~ 184 (233)
T 2ipx_A 178 FVISIKA 184 (233)
T ss_dssp EEEEEEH
T ss_pred EEEEEcc
Confidence 9997754
No 151
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.09 E-value=3.3e-05 Score=70.93 Aligned_cols=123 Identities=14% Similarity=0.047 Sum_probs=66.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.++ ++ .+ .+|+..|+.. ......+. ..+...+-
T Consensus 49 ~~~~vLDlG~G~G~~~~~la--------~~-------~~-~~v~gvDi~~-----------~~~~~a~~n~~~~~~~~~v 101 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS--------TR-------TK-AKIVGVEIQE-----------RLADMAKRSVAYNQLEDQI 101 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH--------TT-------CC-CEEEEECCSH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEcCCchhHHHHHHH--------Hh-------cC-CcEEEEECCH-----------HHHHHHHHHHHHCCCcccE
Confidence 46799999999999888776 22 13 3899999742 11111111 12221112
Q ss_pred eEEecccCCcccCC--CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 127 CFIAGIPGSFYGRL--FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
.++ .+++.+.. ++++++|+|+|+-..+.....- ... .+... .+. .-....++..|++.-.+-|+||
T Consensus 102 ~~~---~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~--~~~-----~~~~~-~~a-~~~~~~~~~~~l~~~~~~Lkpg 169 (259)
T 3lpm_A 102 EII---EYDLKKITDLIPKERADIVTCNPPYFATPDTS--LKN-----TNEHF-RIA-RHEVMCTLEDTIRVAASLLKQG 169 (259)
T ss_dssp EEE---CSCGGGGGGTSCTTCEEEEEECCCC--------------------------------HHHHHHHHHHHHHEEEE
T ss_pred EEE---ECcHHHhhhhhccCCccEEEECCCCCCCcccc--CCC-----CchHH-Hhh-hccccCCHHHHHHHHHHHccCC
Confidence 233 35665433 5689999999965443321000 000 00000 000 0011456788999999999999
Q ss_pred ceEEEEE
Q 036911 205 GHVLLSI 211 (359)
Q Consensus 205 G~l~~~~ 211 (359)
|++++..
T Consensus 170 G~l~~~~ 176 (259)
T 3lpm_A 170 GKANFVH 176 (259)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999965
No 152
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.09 E-value=2.8e-05 Score=69.55 Aligned_cols=103 Identities=11% Similarity=0.086 Sum_probs=61.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+++.+ .|..+|+..|... .....+........+-.|+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~-----------~~~~~~~~~~~~~~~v~~~ 127 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIV--------------GWEGKIFGIEFSP-----------RVLRELVPIVEERRNIVPI 127 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHH--------------CTTSEEEEEESCH-----------HHHHHHHHHHSSCTTEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHh--------------CCCeEEEEEECCH-----------HHHHHHHHHHhccCCCEEE
Confidence 35699999999999999887443 2346788888642 1111111111111122333
Q ss_pred ecccCCcccC---CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 130 AGIPGSFYGR---LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 130 ~~v~gsFy~~---lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
. +++... ..+++++|++++.... |. ....+|+.-.+-|+|||+
T Consensus 128 ~---~d~~~~~~~~~~~~~~D~v~~~~~~------~~-------------------------~~~~~l~~~~~~LkpgG~ 173 (227)
T 1g8a_A 128 L---GDATKPEEYRALVPKVDVIFEDVAQ------PT-------------------------QAKILIDNAEVYLKRGGY 173 (227)
T ss_dssp E---CCTTCGGGGTTTCCCEEEEEECCCS------TT-------------------------HHHHHHHHHHHHEEEEEE
T ss_pred E---ccCCCcchhhcccCCceEEEECCCC------Hh-------------------------HHHHHHHHHHHhcCCCCE
Confidence 3 455431 1234689999975431 11 112357778899999999
Q ss_pred EEEEE
Q 036911 207 VLLSI 211 (359)
Q Consensus 207 l~~~~ 211 (359)
+++.+
T Consensus 174 l~~~~ 178 (227)
T 1g8a_A 174 GMIAV 178 (227)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99994
No 153
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.08 E-value=5.9e-06 Score=79.02 Aligned_cols=162 Identities=12% Similarity=0.020 Sum_probs=65.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh------hCC-
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV------KGS- 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~------~~~- 122 (359)
...+|+|+|||+|..|..++..+ .|..+|+..|+.. ++-... ...+... ++.
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~--------------g~~~~v~~vD~~~-~~~~~a------~~~~~~~~~~~~ln~~~ 163 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAV--------------GSQGRVISFEVRK-DHHDLA------KKNYKHWRDSWKLSHVE 163 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTCEEEEEESSH-HHHHHH------HHHHHHHHHHHTTTCSS
T ss_pred CCCEEEEeCCCcCHHHHHHHHHh--------------CCCceEEEEeCCH-HHHHHH------HHHHHHhhccccccccc
Confidence 35799999999999999887433 2447888888731 111111 0111100 000
Q ss_pred -CCCCeEEecccCCcccC--CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 123 -NFGPCFIAGIPGSFYGR--LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 123 -~~~~~f~~~v~gsFy~~--lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
...++ ..+.+++.+. .++++++|+|++...-+| .+|..-.+
T Consensus 164 ~~~~~v--~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~----------------------------------~~l~~~~~ 207 (336)
T 2b25_A 164 EWPDNV--DFIHKDISGATEDIKSLTFDAVALDMLNPH----------------------------------VTLPVFYP 207 (336)
T ss_dssp CCCCCE--EEEESCTTCCC-------EEEEEECSSSTT----------------------------------TTHHHHGG
T ss_pred ccCCce--EEEECChHHcccccCCCCeeEEEECCCCHH----------------------------------HHHHHHHH
Confidence 00122 2234566554 356789999998543222 14566789
Q ss_pred hhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhc--cc----hhhhhccCCcCccCCCHHHHHHHHhcCCceE
Q 036911 200 EILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEG--LV----EEAKVDWFNLPYYAPSPEEVRHVIQTEGSFN 273 (359)
Q Consensus 200 EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eG--li----~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~ 273 (359)
-|+|||+|++....... +...+..|...+ .. .+.....+..-...+...++.+.++..| |+
T Consensus 208 ~LkpgG~lv~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aG-F~ 274 (336)
T 2b25_A 208 HLKHGGVCAVYVVNITQ------------VIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKI-NT 274 (336)
T ss_dssp GEEEEEEEEEEESSHHH------------HHHHHHHHHHHTCCEEEEEEECCCCCCEEECC-------------------
T ss_pred hcCCCcEEEEEeCCHHH------------HHHHHHHHHhcCCCcccceEEEecccceEEEeecccccchhhhhcccc-cc
Confidence 99999999977643222 223333333221 11 1111111111111122338889999999 88
Q ss_pred EeEEEEEe
Q 036911 274 IRRFDIHT 281 (359)
Q Consensus 274 i~~~e~~~ 281 (359)
+.+++...
T Consensus 275 ~v~~~~~~ 282 (336)
T 2b25_A 275 DVQLDSQE 282 (336)
T ss_dssp --------
T ss_pred cccccccc
Confidence 87766543
No 154
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.08 E-value=1.8e-06 Score=83.24 Aligned_cols=105 Identities=15% Similarity=0.203 Sum_probs=69.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..+..+. +. .|..+++..|+.. ......+. ..+. ...
T Consensus 197 ~~~VLDlGcG~G~~~~~la--------~~-------~~~~~v~~vD~s~-----------~~l~~a~~~~~~~~~--~~~ 248 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFA--------RH-------SPKIRLTLCDVSA-----------PAVEASRATLAANGV--EGE 248 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHH--------HH-------CTTCBCEEEESBH-----------HHHHHHHHHHHHTTC--CCE
T ss_pred CCeEEEecCccCHHHHHHH--------HH-------CCCCEEEEEECCH-----------HHHHHHHHHHHHhCC--CCE
Confidence 4689999999999998776 22 1457888888741 11111111 1121 122
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
+ +.+++.. ++++++|+|+|+..+||..... ..+...||+.-.+-|+|||.+
T Consensus 249 ~---~~~d~~~--~~~~~fD~Iv~~~~~~~g~~~~------------------------~~~~~~~l~~~~~~LkpgG~l 299 (343)
T 2pjd_A 249 V---FASNVFS--EVKGRFDMIISNPPFHDGMQTS------------------------LDAAQTLIRGAVRHLNSGGEL 299 (343)
T ss_dssp E---EECSTTT--TCCSCEEEEEECCCCCSSSHHH------------------------HHHHHHHHHHHGGGEEEEEEE
T ss_pred E---EEccccc--cccCCeeEEEECCCcccCccCC------------------------HHHHHHHHHHHHHhCCCCcEE
Confidence 3 3356654 3478999999999999832211 134557999999999999999
Q ss_pred EEEEe
Q 036911 208 LLSII 212 (359)
Q Consensus 208 ~~~~~ 212 (359)
++...
T Consensus 300 ~i~~~ 304 (343)
T 2pjd_A 300 RIVAN 304 (343)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99764
No 155
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.07 E-value=7.8e-06 Score=72.78 Aligned_cols=99 Identities=11% Similarity=0.003 Sum_probs=61.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+++. ..+|+..|+.. ...+..++ ..+...+-
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~-----------------~~~v~~vD~s~-----------~~~~~a~~~~~~~g~~~~v 106 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA-----------------GGRAITIEPRA-----------DRIENIQKNIDTYGLSPRM 106 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-----------------TCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEecCCCCHHHHHHHHc-----------------CCEEEEEeCCH-----------HHHHHHHHHHHHcCCCCCE
Confidence 3579999999999998877621 26788888741 11121211 11211011
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.++ .+++.+.+....++|++++..++ +.. +|+.-.+.|+|||+
T Consensus 107 ~~~---~~d~~~~~~~~~~~D~v~~~~~~---------------------------------~~~-~l~~~~~~LkpgG~ 149 (204)
T 3njr_A 107 RAV---QGTAPAALADLPLPEAVFIGGGG---------------------------------SQA-LYDRLWEWLAPGTR 149 (204)
T ss_dssp EEE---ESCTTGGGTTSCCCSEEEECSCC---------------------------------CHH-HHHHHHHHSCTTCE
T ss_pred EEE---eCchhhhcccCCCCCEEEECCcc---------------------------------cHH-HHHHHHHhcCCCcE
Confidence 233 35666544445689999975533 112 67777889999999
Q ss_pred EEEEEec
Q 036911 207 VLLSIIG 213 (359)
Q Consensus 207 l~~~~~g 213 (359)
+++....
T Consensus 150 lv~~~~~ 156 (204)
T 3njr_A 150 IVANAVT 156 (204)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9998753
No 156
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.06 E-value=7.1e-06 Score=78.05 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=65.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++.. ....+|+..|+.. ...+..++ ..+. .+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~-----------~~~~~a~~~~~~~g~--~~ 127 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVV--------------GEKGLVVSVEYSR-----------KICEIAKRNVERLGI--EN 127 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHTTC--CS
T ss_pred CcCEEEEecCCchHHHHHHHHhc--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCC--CC
Confidence 35799999999999988877332 1136788888742 11111111 1121 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
+ ..+.+++...+.+++++|+|++...+|++.+ .-.+-|+|||+
T Consensus 128 v--~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~~-----------------------------------~~~~~LkpgG~ 170 (317)
T 1dl5_A 128 V--IFVCGDGYYGVPEFSPYDVIFVTVGVDEVPE-----------------------------------TWFTQLKEGGR 170 (317)
T ss_dssp E--EEEESCGGGCCGGGCCEEEEEECSBBSCCCH-----------------------------------HHHHHEEEEEE
T ss_pred e--EEEECChhhccccCCCeEEEEEcCCHHHHHH-----------------------------------HHHHhcCCCcE
Confidence 2 2233677665556789999999999988541 22568999999
Q ss_pred EEEEEecC
Q 036911 207 VLLSIIGN 214 (359)
Q Consensus 207 l~~~~~g~ 214 (359)
+++.+...
T Consensus 171 lvi~~~~~ 178 (317)
T 1dl5_A 171 VIVPINLK 178 (317)
T ss_dssp EEEEBCBG
T ss_pred EEEEECCC
Confidence 99987543
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.06 E-value=1e-05 Score=74.88 Aligned_cols=123 Identities=16% Similarity=0.154 Sum_probs=67.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh------hCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV------KGSN 123 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~------~~~~ 123 (359)
...+|+|+|||+|..++.+.+.. |..+++..|+-. ......+.. .+..
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~---------------~~~~v~gvDi~~-----------~~~~~a~~n~~~~~~~~l~ 89 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL---------------EKAEVTLYERSQ-----------EMAEFARRSLELPDNAAFS 89 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC---------------TTEEEEEEESSH-----------HHHHHHHHHTTSGGGTTTG
T ss_pred CCCEEEEeCChHhHHHHHHHHhC---------------CCCeEEEEECCH-----------HHHHHHHHHHHhhhhCCCc
Confidence 35799999999999988877321 457889889741 111111111 1110
Q ss_pred CCCeEEecccCCcccC-------CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHH
Q 036911 124 FGPCFIAGIPGSFYGR-------LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTS 196 (359)
Q Consensus 124 ~~~~f~~~v~gsFy~~-------lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~ 196 (359)
.++- .+.+++.+. .++++++|+|+|+--.++...... . +... .+.. -....++..||+.
T Consensus 90 -~~v~--~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~---~------~~~~-~~a~-~~~~~~~~~~l~~ 155 (260)
T 2ozv_A 90 -ARIE--VLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRT---P------DALK-AEAH-AMTEGLFEDWIRT 155 (260)
T ss_dssp -GGEE--EEECCTTCCHHHHHHTTCCTTCEEEEEECCCC--------------------------------CCHHHHHHH
T ss_pred -ceEE--EEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCC---c------CHHH-HHHh-hcCcCCHHHHHHH
Confidence 1121 223566543 367899999999755544321000 0 0000 0000 0013457889999
Q ss_pred HHHhhccCceEEEEEe
Q 036911 197 RSEEILSGGHVLLSII 212 (359)
Q Consensus 197 Ra~EL~pGG~l~~~~~ 212 (359)
-++-|+|||++++...
T Consensus 156 ~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 156 ASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHEEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEEEEc
Confidence 9999999999998763
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.06 E-value=3.5e-05 Score=69.91 Aligned_cols=100 Identities=11% Similarity=-0.025 Sum_probs=64.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hh-CCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VK-GSNFG 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~-~~~~~ 125 (359)
...+|+|+|||+|..+..+++.+ .|..+++..|+.. ......++ .. +. .
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~-----------~~~~~a~~~~~~~~g~--~ 148 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAV--------------GEKGLVESYEARP-----------HHLAQAERNVRAFWQV--E 148 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEEESCH-----------HHHHHHHHHHHHHCCC--C
T ss_pred CCCEEEEECCCcCHHHHHHHHHh--------------CCCCEEEEEeCCH-----------HHHHHHHHHHHHhcCC--C
Confidence 35799999999999998887443 2447888888742 11111111 11 31 2
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
++- .+.+++.+..++++++|++++. + |.. . .+|+.-.+-|+|||
T Consensus 149 ~v~--~~~~d~~~~~~~~~~~D~v~~~----~----~~~-~-------------------------~~l~~~~~~L~~gG 192 (258)
T 2pwy_A 149 NVR--FHLGKLEEAELEEAAYDGVALD----L----MEP-W-------------------------KVLEKAALALKPDR 192 (258)
T ss_dssp CEE--EEESCGGGCCCCTTCEEEEEEE----S----SCG-G-------------------------GGHHHHHHHEEEEE
T ss_pred CEE--EEECchhhcCCCCCCcCEEEEC----C----cCH-H-------------------------HHHHHHHHhCCCCC
Confidence 222 2236776655888999999982 1 221 1 26777789999999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
++++...
T Consensus 193 ~l~~~~~ 199 (258)
T 2pwy_A 193 FLVAYLP 199 (258)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9998873
No 159
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.05 E-value=2.2e-05 Score=74.42 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=64.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhc-ccchHHHHHHhhCCCCCCe
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKS-LPGFYEKLKEVKGSNFGPC 127 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~-l~~~~~~~~~~~~~~~~~~ 127 (359)
+++.+|+|+|||+|..+..++ +. .+..+++..|+... .-.+.+. ++. +... ....+-.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~-~i~~a~~~~~~----~~~~-~~~~~v~ 152 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL--------RH-------GTVEHCDLVDIDGE-VMEQSKQHFPQ----ISRS-LADPRAT 152 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH--------TC-------TTCCEEEEEESCHH-HHHHHHHHCHH----HHGG-GGCTTEE
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------hC-------CCCCEEEEEECCHH-HHHHHHHHhHH----hhcc-cCCCcEE
Confidence 456899999999999888775 21 23468888887421 1111100 000 0000 0111222
Q ss_pred EEecccCCcccCCC--CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 128 FIAGIPGSFYGRLF--PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 128 f~~~v~gsFy~~lf--p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
++. ++....+. +++++|+|++....++.. +..+.. ..|++.-.+-|+|||
T Consensus 153 ~~~---~D~~~~~~~~~~~~fDvIi~d~~~~~~~--~~~l~~-----------------------~~~l~~~~~~LkpgG 204 (304)
T 3bwc_A 153 VRV---GDGLAFVRQTPDNTYDVVIIDTTDPAGP--ASKLFG-----------------------EAFYKDVLRILKPDG 204 (304)
T ss_dssp EEE---SCHHHHHHSSCTTCEEEEEEECC-----------CC-----------------------HHHHHHHHHHEEEEE
T ss_pred EEE---CcHHHHHHhccCCceeEEEECCCCcccc--chhhhH-----------------------HHHHHHHHHhcCCCc
Confidence 333 45544333 578999999987776521 111110 258989999999999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
+|++...
T Consensus 205 ~lv~~~~ 211 (304)
T 3bwc_A 205 ICCNQGE 211 (304)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9998853
No 160
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.04 E-value=1.1e-05 Score=74.43 Aligned_cols=99 Identities=15% Similarity=0.060 Sum_probs=63.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+... .|..+|+..|... .....++. ..+. .+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~l--~~ 131 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---------------RPELELVLVDATR-----------KKVAFVERAIEVLGL--KG 131 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---------------CTTCEEEEEESCH-----------HHHHHHHHHHHHHTC--SS
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---------------CCCCEEEEEECCH-----------HHHHHHHHHHHHhCC--Cc
Confidence 4679999999999999988622 1568999999742 11111211 1232 22
Q ss_pred eEEecccCCcccCCC---CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 127 CFIAGIPGSFYGRLF---PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf---p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
+ ..+.++..+... .++++|+|+|...- ++..+++...+-|+|
T Consensus 132 v--~~~~~d~~~~~~~~~~~~~fD~I~s~a~~---------------------------------~~~~ll~~~~~~Lkp 176 (249)
T 3g89_A 132 A--RALWGRAEVLAREAGHREAYARAVARAVA---------------------------------PLCVLSELLLPFLEV 176 (249)
T ss_dssp E--EEEECCHHHHTTSTTTTTCEEEEEEESSC---------------------------------CHHHHHHHHGGGEEE
T ss_pred e--EEEECcHHHhhcccccCCCceEEEECCcC---------------------------------CHHHHHHHHHHHcCC
Confidence 2 223456655443 35899999995321 234588888899999
Q ss_pred CceEEEEE
Q 036911 204 GGHVLLSI 211 (359)
Q Consensus 204 GG~l~~~~ 211 (359)
||++++..
T Consensus 177 gG~l~~~~ 184 (249)
T 3g89_A 177 GGAAVAMK 184 (249)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 99998755
No 161
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.04 E-value=8.1e-06 Score=73.07 Aligned_cols=105 Identities=16% Similarity=0.059 Sum_probs=65.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCC----
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGS---- 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~---- 122 (359)
...+|+|+|||+|..+..+.+.. . ....|..+|+..|... ......+. ..+.
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~-----~-----~~~~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~~ 138 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKM-----N-----VLENKNSYVIGLERVK-----------DLVNFSLENIKRDKPELLK 138 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHT-----T-----TTTCTTCEEEEEESCH-----------HHHHHHHHHHHHHCGGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHh-----c-----ccCCCCCEEEEEeCCH-----------HHHHHHHHHHHHcCccccc
Confidence 35799999999999988776322 0 0011456888888742 11111111 1110
Q ss_pred CCCCeEEecccCCcccCC----CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHH
Q 036911 123 NFGPCFIAGIPGSFYGRL----FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRS 198 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~l----fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra 198 (359)
..+-.++ .++....+ ++.+++|+|++..++|++ +. .-.
T Consensus 139 ~~~v~~~---~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~---~~--------------------------------~~~ 180 (227)
T 2pbf_A 139 IDNFKII---HKNIYQVNEEEKKELGLFDAIHVGASASEL---PE--------------------------------ILV 180 (227)
T ss_dssp STTEEEE---ECCGGGCCHHHHHHHCCEEEEEECSBBSSC---CH--------------------------------HHH
T ss_pred cCCEEEE---ECChHhcccccCccCCCcCEEEECCchHHH---HH--------------------------------HHH
Confidence 1112233 35665544 566889999999998863 21 346
Q ss_pred HhhccCceEEEEEec
Q 036911 199 EEILSGGHVLLSIIG 213 (359)
Q Consensus 199 ~EL~pGG~l~~~~~g 213 (359)
+-|+|||++++.+..
T Consensus 181 ~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 181 DLLAENGKLIIPIEE 195 (227)
T ss_dssp HHEEEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEEcc
Confidence 789999999999875
No 162
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.03 E-value=1.9e-05 Score=67.29 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=45.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++ +..+++..|+.. ...+..+. ..+. .+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~--~~ 84 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYLD-----------GAIEVTKQNLAKFNI--KN 84 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-----------------TSSEEEEEECSH-----------HHHHHHHHHHHHTTC--CS
T ss_pred CCCEEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCCH-----------HHHHHHHHHHHHcCC--Cc
Confidence 357999999999999887761 347888888642 11111111 1121 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEeccc
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYS 154 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~a 154 (359)
+ ..+.+++.+ .+|++++|+++++..
T Consensus 85 ~--~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 85 C--QIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp E--EEEESCHHH-HGGGCCCSEEEECSC
T ss_pred E--EEEECCccc-cccCCCCcEEEECCc
Confidence 2 123467766 677789999999766
No 163
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.02 E-value=2.9e-05 Score=71.66 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=66.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---h-CCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---K-GSNFG 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~-~~~~~ 125 (359)
...+|+|+|||+|..+..+++.+ .|..+++..|+.. ...+..+.. . +....
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~g~~~~ 153 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAV--------------GPAGQVISYEQRA-----------DHAEHARRNVSGCYGQPPD 153 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEECSCH-----------HHHHHHHHHHHHHHTSCCT
T ss_pred CCCEEEEEcccccHHHHHHHHHh--------------CCCCEEEEEeCCH-----------HHHHHHHHHHHHhcCCCCC
Confidence 35699999999999999887433 2457888888731 111111111 1 20012
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
++- .+.+++.+..++++++|++++...-.| .+|+.-.+-|+|||
T Consensus 154 ~v~--~~~~d~~~~~~~~~~~D~v~~~~~~~~----------------------------------~~l~~~~~~L~pgG 197 (280)
T 1i9g_A 154 NWR--LVVSDLADSELPDGSVDRAVLDMLAPW----------------------------------EVLDAVSRLLVAGG 197 (280)
T ss_dssp TEE--EECSCGGGCCCCTTCEEEEEEESSCGG----------------------------------GGHHHHHHHEEEEE
T ss_pred cEE--EEECchHhcCCCCCceeEEEECCcCHH----------------------------------HHHHHHHHhCCCCC
Confidence 222 234677777778899999998322111 26777789999999
Q ss_pred eEEEEEec
Q 036911 206 HVLLSIIG 213 (359)
Q Consensus 206 ~l~~~~~g 213 (359)
++++....
T Consensus 198 ~l~~~~~~ 205 (280)
T 1i9g_A 198 VLMVYVAT 205 (280)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 99998854
No 164
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.02 E-value=1.2e-05 Score=79.52 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=68.3
Q ss_pred CcceEEeecCC------CCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCC
Q 036911 50 ECLKIADLGCS------SGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSN 123 (359)
Q Consensus 50 ~~~~IaDlGCs------~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~ 123 (359)
++.+|||+||| +|..|+.+++.. .|..+|+..|+..+- .+ . .
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~--------------fP~a~V~GVDiSp~m---~~-------------~--~ 263 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSF--------------FPRGQIYGLDIMDKS---HV-------------D--E 263 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHH--------------CTTCEEEEEESSCCG---GG-------------C--B
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCHHH---hh-------------c--C
Confidence 46899999999 888888776332 245899999986431 00 0 0
Q ss_pred CCCeEEecccCCcccCCCC------CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHH
Q 036911 124 FGPCFIAGIPGSFYGRLFP------NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSR 197 (359)
Q Consensus 124 ~~~~f~~~v~gsFy~~lfp------~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~R 197 (359)
.+-.|+. |+..+..|+ ++++|+|+|..+ ||..+ +..+|+.-
T Consensus 264 ~rI~fv~---GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~d-----------------------------~~~aL~el 310 (419)
T 3sso_A 264 LRIRTIQ---GDQNDAEFLDRIARRYGPFDIVIDDGS-HINAH-----------------------------VRTSFAAL 310 (419)
T ss_dssp TTEEEEE---CCTTCHHHHHHHHHHHCCEEEEEECSC-CCHHH-----------------------------HHHHHHHH
T ss_pred CCcEEEE---ecccccchhhhhhcccCCccEEEECCc-ccchh-----------------------------HHHHHHHH
Confidence 0223444 566655566 789999999765 55332 33578888
Q ss_pred HHhhccCceEEEEEec
Q 036911 198 SEEILSGGHVLLSIIG 213 (359)
Q Consensus 198 a~EL~pGG~l~~~~~g 213 (359)
.+-|||||++++.-+-
T Consensus 311 ~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 311 FPHVRPGGLYVIEDMW 326 (419)
T ss_dssp GGGEEEEEEEEEECGG
T ss_pred HHhcCCCeEEEEEecc
Confidence 9999999999997554
No 165
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.02 E-value=1.7e-05 Score=71.24 Aligned_cols=108 Identities=13% Similarity=0.097 Sum_probs=63.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC----CCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS----NFGP 126 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~----~~~~ 126 (359)
..+|+|+|||+|..|..+.+.. .. . ...+..+|+..|.... .-.. ....+.. .+. ..+-
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~-----~~---~-~~~~~~~v~~vD~~~~-~~~~------a~~~~~~-~~~~~~~~~~v 147 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYI-----KA---K-GVDADTRIVGIEHQAE-LVRR------SKANLNT-DDRSMLDSGQL 147 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-----HH---S-CCCTTCEEEEEESCHH-HHHH------HHHHHHH-HHHHHHHHTSE
T ss_pred CCEEEEECCCccHHHHHHHHhc-----cc---c-cCCccCEEEEEEcCHH-HHHH------HHHHHHh-cCccccCCCce
Confidence 5799999999999999887433 10 0 0112357888886421 1000 0011111 000 0012
Q ss_pred eEEecccCCcccCCCCC-CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRLFPN-KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~-~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.++. ++... .+|+ +++|++++..++|++. . .-.+-|+|||
T Consensus 148 ~~~~---~d~~~-~~~~~~~fD~I~~~~~~~~~~---~--------------------------------~~~~~LkpgG 188 (227)
T 1r18_A 148 LIVE---GDGRK-GYPPNAPYNAIHVGAAAPDTP---T--------------------------------ELINQLASGG 188 (227)
T ss_dssp EEEE---SCGGG-CCGGGCSEEEEEECSCBSSCC---H--------------------------------HHHHTEEEEE
T ss_pred EEEE---CCccc-CCCcCCCccEEEECCchHHHH---H--------------------------------HHHHHhcCCC
Confidence 2333 56554 4555 8999999999998743 1 3367799999
Q ss_pred eEEEEEecC
Q 036911 206 HVLLSIIGN 214 (359)
Q Consensus 206 ~l~~~~~g~ 214 (359)
+|++.+...
T Consensus 189 ~lvi~~~~~ 197 (227)
T 1r18_A 189 RLIVPVGPD 197 (227)
T ss_dssp EEEEEESCS
T ss_pred EEEEEEecC
Confidence 999998653
No 166
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.98 E-value=3.5e-05 Score=72.96 Aligned_cols=117 Identities=9% Similarity=0.060 Sum_probs=65.1
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh-C--CCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK-G--SNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~-~--~~~~ 125 (359)
+++.+|+|+|||+|..+..++ +. .+..+|+..|+... .-.+.+ ..+.... + ...+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~V~~VDid~~-vi~~ar------~~~~~~~~~~~~~~r 139 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVT--------RH-------KNVESITMVEIDAG-VVSFCR------QYLPNHNAGSYDDPR 139 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------TC-------TTCCEEEEECSCTT-HHHHHH------HHCHHHHSSCTTCTT
T ss_pred CCCCEEEEEeCChhHHHHHHH--------hC-------CCCCEEEEEECCHH-HHHHHH------HhhhhcccccccCCc
Confidence 457899999999999888776 21 24478889998532 111111 0011110 0 1112
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
--++.+....|.. .+++++|+|++...-+|.. +..+. -..|++...+-|+|||
T Consensus 140 v~~~~~D~~~~l~--~~~~~fDvIi~D~~~p~~~--~~~l~-----------------------~~~f~~~~~~~LkpgG 192 (294)
T 3adn_A 140 FKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGP--GESLF-----------------------TSAFYEGCKRCLNPGG 192 (294)
T ss_dssp CCEECSCSCC-----CCCCCEEEEEECC------------C-----------------------CHHHHHHHHHTEEEEE
T ss_pred eEEEEChHHHHHh--hcCCCccEEEECCCCccCc--chhcc-----------------------HHHHHHHHHHhcCCCC
Confidence 3344443333322 2578999999976655521 11110 1358999999999999
Q ss_pred eEEEEEecC
Q 036911 206 HVLLSIIGN 214 (359)
Q Consensus 206 ~l~~~~~g~ 214 (359)
+|++...+.
T Consensus 193 ~lv~~~~s~ 201 (294)
T 3adn_A 193 IFVAQNGVC 201 (294)
T ss_dssp EEEEEEEEC
T ss_pred EEEEecCCc
Confidence 999987544
No 167
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.97 E-value=9.6e-06 Score=80.41 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=67.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhccc-chHHHHHHhhCCCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLP-GFYEKLKEVKGSNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~-~~~~~~~~~~~~~~~~~f 128 (359)
...+|+|+|||+|..++.++... +.-+++.-|+.. +.-.+.+..- .+.... ...|....+
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~---------------g~~kVvGIDiS~-~~lelAr~n~e~frkr~-~~~Gl~~~r-- 233 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAAT---------------NCKHHYGVEKAD-IPAKYAETMDREFRKWM-KWYGKKHAE-- 233 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHC---------------CCSEEEEEECCH-HHHHHHHHHHHHHHHHH-HHHTBCCCE--
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC---------------CCCEEEEEeCCH-HHHHHHHHHHHHHHHHH-HHhCCCCCC--
Confidence 35799999999999988776221 324588888742 1111111100 000000 112211112
Q ss_pred EecccCCcccCCCCC--CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 129 IAGIPGSFYGRLFPN--KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~--~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
+.-+-|+|.+..++. .++|+|+++..++| | |...-|+.+.+.|+|||+
T Consensus 234 Vefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~----p--------------------------dl~~aL~Ei~RvLKPGGr 283 (438)
T 3uwp_A 234 YTLERGDFLSEEWRERIANTSVIFVNNFAFG----P--------------------------EVDHQLKERFANMKEGGR 283 (438)
T ss_dssp EEEEECCTTSHHHHHHHHTCSEEEECCTTCC----H--------------------------HHHHHHHHHHTTSCTTCE
T ss_pred eEEEECcccCCccccccCCccEEEEcccccC----c--------------------------hHHHHHHHHHHcCCCCcE
Confidence 223447888766654 47999999888766 2 223356677899999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
++++-.
T Consensus 284 IVssE~ 289 (438)
T 3uwp_A 284 IVSSKP 289 (438)
T ss_dssp EEESSC
T ss_pred EEEeec
Confidence 987733
No 168
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.96 E-value=3.9e-05 Score=75.22 Aligned_cols=137 Identities=14% Similarity=0.158 Sum_probs=74.0
Q ss_pred chHHHhhHHHHHHHHHhH-HHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEe
Q 036911 16 TSYANNSKIQKRAMLTAK-PILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFL 94 (359)
Q Consensus 16 ~sY~~ns~~Q~~~~~~~~-~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~ 94 (359)
.||+..+..+.-+.+... ..-++||.+-.. .. +.-+|+|+|||+|.+|+..+ +. | + -+|+.
T Consensus 50 ~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~-~~-~~k~VLDvG~GtGiLs~~Aa--------~a----G---A-~~V~a 111 (376)
T 4hc4_A 50 ECYSDVSVHEEMIADRVRTDAYRLGILRNWA-AL-RGKTVLDVGAGTGILSIFCA--------QA----G---A-RRVYA 111 (376)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHTTHH-HH-TTCEEEEETCTTSHHHHHHH--------HT----T---C-SEEEE
T ss_pred hhccCcHHHHHHhCCHHHHHHHHHHHHhCHH-hc-CCCEEEEeCCCccHHHHHHH--------Hh----C---C-CEEEE
Confidence 578887766544333321 122334421100 01 23589999999998887654 21 1 2 57888
Q ss_pred cCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCC
Q 036911 95 NDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLN 174 (359)
Q Consensus 95 nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n 174 (359)
.|.. +.-. ........++....-.+ +.|+..+.-+| ..+|+++|-+--+.|-.
T Consensus 112 ve~s--~~~~-------~a~~~~~~n~~~~~i~~---i~~~~~~~~lp-e~~DvivsE~~~~~l~~-------------- 164 (376)
T 4hc4_A 112 VEAS--AIWQ-------QAREVVRFNGLEDRVHV---LPGPVETVELP-EQVDAIVSEWMGYGLLH-------------- 164 (376)
T ss_dssp EECS--TTHH-------HHHHHHHHTTCTTTEEE---EESCTTTCCCS-SCEEEEECCCCBTTBTT--------------
T ss_pred EeCh--HHHH-------HHHHHHHHcCCCceEEE---EeeeeeeecCC-ccccEEEeecccccccc--------------
Confidence 8853 1111 11112223343212223 34566554445 78999999322111111
Q ss_pred CcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 175 KGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 175 ~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
...+..+|.+|.+-|+|||+++-
T Consensus 165 ------------e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 165 ------------ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ------------TCSHHHHHHHHHHHEEEEEEEES
T ss_pred ------------cchhhhHHHHHHhhCCCCceECC
Confidence 12345699999999999999863
No 169
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.96 E-value=3.2e-05 Score=82.38 Aligned_cols=110 Identities=13% Similarity=0.063 Sum_probs=73.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH----hhC---C
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE----VKG---S 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~----~~~---~ 122 (359)
...+|+|+|||+|..+..++ +. .+|..+|+..|+.. ......++ ... .
T Consensus 721 ~g~rVLDVGCGTG~lai~LA--------r~------g~p~a~VtGVDIS~-----------emLe~AReRLa~~lnAkr~ 775 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL--------DY------PTSLQTIIGVDISP-----------KGLARAAKMLHVKLNKEAC 775 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT--------SS------CCCCCEEEEEESCH-----------HHHHHHHHHHHHHTTTTCS
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh------CCCCCeEEEEECCH-----------HHHHHHHHHhhhccchhhc
Confidence 45799999999999988776 21 12446899999852 11111111 100 0
Q ss_pred CCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 123 NFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
...+ +..+-|++....++++++|+|+++.++||+.+ | +...||+.-.+-|+
T Consensus 776 gl~n--VefiqGDa~dLp~~d~sFDlVV~~eVLeHL~d-p--------------------------~l~~~L~eI~RvLK 826 (950)
T 3htx_A 776 NVKS--ATLYDGSILEFDSRLHDVDIGTCLEVIEHMEE-D--------------------------QACEFGEKVLSLFH 826 (950)
T ss_dssp SCSE--EEEEESCTTSCCTTSCSCCEEEEESCGGGSCH-H--------------------------HHHHHHHHHHHTTC
T ss_pred CCCc--eEEEECchHhCCcccCCeeEEEEeCchhhCCh-H--------------------------HHHHHHHHHHHHcC
Confidence 1111 22234688888888899999999999999765 1 12247888899999
Q ss_pred cCceEEEEEecC
Q 036911 203 SGGHVLLSIIGN 214 (359)
Q Consensus 203 pGG~l~~~~~g~ 214 (359)
|| +++++.+..
T Consensus 827 PG-~LIISTPN~ 837 (950)
T 3htx_A 827 PK-LLIVSTPNY 837 (950)
T ss_dssp CS-EEEEEECBG
T ss_pred CC-EEEEEecCc
Confidence 99 888877654
No 170
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.96 E-value=3.5e-05 Score=73.82 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=70.5
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC--CCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS--NFGP 126 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~--~~~~ 126 (359)
+++.+|+|+|||+|..+..++ +++ |..++...|+- +...+..++..+. ..+-
T Consensus 88 p~~~rVLdIG~G~G~la~~la--------~~~-------p~~~v~~VEid-----------p~vi~~Ar~~~~~~~~~rv 141 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFA--------DVY-------PQSRNTVVELD-----------AELARLSREWFDIPRAPRV 141 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHH--------HHS-------TTCEEEEEESC-----------HHHHHHHHHHSCCCCTTTE
T ss_pred CCCCEEEEEECCcCHHHHHHH--------HHC-------CCcEEEEEECC-----------HHHHHHHHHhccccCCCce
Confidence 345799999999999888776 322 45788888874 1222222222211 1122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.++.+-...|.. -++++++|+|++....+| ..|..+.. ..|++..++-|+|||+
T Consensus 142 ~v~~~Da~~~l~-~~~~~~fDvIi~D~~~~~--~~~~~L~t-----------------------~efl~~~~r~LkpgGv 195 (317)
T 3gjy_A 142 KIRVDDARMVAE-SFTPASRDVIIRDVFAGA--ITPQNFTT-----------------------VEFFEHCHRGLAPGGL 195 (317)
T ss_dssp EEEESCHHHHHH-TCCTTCEEEEEECCSTTS--CCCGGGSB-----------------------HHHHHHHHHHEEEEEE
T ss_pred EEEECcHHHHHh-hccCCCCCEEEECCCCcc--ccchhhhH-----------------------HHHHHHHHHhcCCCcE
Confidence 333432222221 246789999999877666 22332221 3599999999999999
Q ss_pred EEEEEecC
Q 036911 207 VLLSIIGN 214 (359)
Q Consensus 207 l~~~~~g~ 214 (359)
|++.....
T Consensus 196 lv~~~~~~ 203 (317)
T 3gjy_A 196 YVANCGDH 203 (317)
T ss_dssp EEEEEEEC
T ss_pred EEEEecCC
Confidence 99988654
No 171
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.95 E-value=1.6e-05 Score=73.66 Aligned_cols=99 Identities=17% Similarity=0.138 Sum_probs=62.8
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~~ 127 (359)
..+|+|+|||+|..++.+++.+ .|..+++..|+.. ......++. .+.. .++
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~-~~v 166 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAV--------------GSSGKVFAYEKRE-----------EFAKLAESNLTKWGLI-ERV 166 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHT--------------TTTCEEEEECCCH-----------HHHHHHHHHHHHTTCG-GGE
T ss_pred CCEEEEECCcCCHHHHHHHHHh--------------CCCcEEEEEECCH-----------HHHHHHHHHHHHcCCC-CCE
Confidence 5699999999999998887432 2457899999742 111111111 1210 112
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
..+.+++.+. ++++++|++++. .|.. . .+|+.-.+-|+|||++
T Consensus 167 --~~~~~d~~~~-~~~~~~D~V~~~--------~~~~-~-------------------------~~l~~~~~~L~pgG~l 209 (277)
T 1o54_A 167 --TIKVRDISEG-FDEKDVDALFLD--------VPDP-W-------------------------NYIDKCWEALKGGGRF 209 (277)
T ss_dssp --EEECCCGGGC-CSCCSEEEEEEC--------CSCG-G-------------------------GTHHHHHHHEEEEEEE
T ss_pred --EEEECCHHHc-ccCCccCEEEEC--------CcCH-H-------------------------HHHHHHHHHcCCCCEE
Confidence 2234677654 788899999983 2321 1 2677778899999999
Q ss_pred EEEEe
Q 036911 208 LLSII 212 (359)
Q Consensus 208 ~~~~~ 212 (359)
++...
T Consensus 210 ~~~~~ 214 (277)
T 1o54_A 210 ATVCP 214 (277)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99874
No 172
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.93 E-value=2.1e-05 Score=67.40 Aligned_cols=107 Identities=7% Similarity=-0.082 Sum_probs=62.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~ 126 (359)
...+|+|+|||+|..++.++ +. +..+++..|+.. ...+..+.. .+...+-
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~--------~~--------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~~ 83 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV--------SR--------GMSAAVLVEKNR-----------KAQAIIQDNIIMTKAENRF 83 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH--------HT--------TCCEEEEECCCH-----------HHHHHHHHHHHTTTCGGGE
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc--------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCce
Confidence 45799999999999988765 21 236889899741 111212111 1110011
Q ss_pred eEEecccCCcccC-CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHH--HHhhcc
Q 036911 127 CFIAGIPGSFYGR-LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSR--SEEILS 203 (359)
Q Consensus 127 ~f~~~v~gsFy~~-lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~R--a~EL~p 203 (359)
.+ +.+++.+. ...++++|+++++..+|+- ++..+++.- .+-|+|
T Consensus 84 ~~---~~~d~~~~~~~~~~~fD~i~~~~~~~~~------------------------------~~~~~~~~l~~~~~L~~ 130 (177)
T 2esr_A 84 TL---LKMEAERAIDCLTGRFDLVFLDPPYAKE------------------------------TIVATIEALAAKNLLSE 130 (177)
T ss_dssp EE---ECSCHHHHHHHBCSCEEEEEECCSSHHH------------------------------HHHHHHHHHHHTTCEEE
T ss_pred EE---EECcHHHhHHhhcCCCCEEEECCCCCcc------------------------------hHHHHHHHHHhCCCcCC
Confidence 23 23566542 2345679999997554431 111233333 378999
Q ss_pred CceEEEEEecCCC
Q 036911 204 GGHVLLSIIGNDR 216 (359)
Q Consensus 204 GG~l~~~~~g~~~ 216 (359)
||++++.......
T Consensus 131 gG~l~~~~~~~~~ 143 (177)
T 2esr_A 131 QVMVVCETDKTVL 143 (177)
T ss_dssp EEEEEEEEETTCC
T ss_pred CcEEEEEECCccc
Confidence 9999999876654
No 173
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.93 E-value=2.3e-05 Score=70.47 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=62.8
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..+..+++.. |..+|+..|+.. ......+. ..+...+-.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~---------------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v~ 108 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL---------------PEATIVSIERDE-----------RRYEEAHKHVKALGLESRIE 108 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC---------------TTCEEEEECCCH-----------HHHHHHHHHHHHTTCTTTEE
T ss_pred CCEEEEecCCCcHHHHHHHHHC---------------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcEE
Confidence 5699999999999998887332 347888889742 11111211 112211122
Q ss_pred EEecccCCcccCC-CC--CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 128 FIAGIPGSFYGRL-FP--NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 128 f~~~v~gsFy~~l-fp--~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
++ .+++...+ .. ++++|+|++....+ ++..+|+.-.+-|+||
T Consensus 109 ~~---~~d~~~~~~~~~~~~~fD~I~~~~~~~--------------------------------~~~~~l~~~~~~L~pg 153 (233)
T 2gpy_A 109 LL---FGDALQLGEKLELYPLFDVLFIDAAKG--------------------------------QYRRFFDMYSPMVRPG 153 (233)
T ss_dssp EE---CSCGGGSHHHHTTSCCEEEEEEEGGGS--------------------------------CHHHHHHHHGGGEEEE
T ss_pred EE---ECCHHHHHHhcccCCCccEEEECCCHH--------------------------------HHHHHHHHHHHHcCCC
Confidence 33 34554321 12 57899999855432 2335888888999999
Q ss_pred ceEEEEEe
Q 036911 205 GHVLLSII 212 (359)
Q Consensus 205 G~l~~~~~ 212 (359)
|++++..+
T Consensus 154 G~lv~~~~ 161 (233)
T 2gpy_A 154 GLILSDNV 161 (233)
T ss_dssp EEEEEETT
T ss_pred eEEEEEcC
Confidence 99998743
No 174
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.92 E-value=3e-05 Score=71.88 Aligned_cols=124 Identities=17% Similarity=0.202 Sum_probs=72.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+++.. |..+++..|... ......+. ..+.. +-
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~---------------~~~~v~~vD~s~-----------~~l~~a~~n~~~~~~~-~v 161 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASER---------------PDCEIIAVDRMP-----------DAVSLAQRNAQHLAIK-NI 161 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHC---------------TTSEEEEECSSH-----------HHHHHHHHHHHHHTCC-SE
T ss_pred CCCEEEEecCCccHHHHHHHHhC---------------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCC-ce
Confidence 35699999999999988776321 457899999742 11111111 11221 12
Q ss_pred eEEecccCCcccCCCCCCceeEEEeccccccccc--CCCCccc-cCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQ--VPEGLVS-ESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~--~p~~~~~-~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
.| +.+++.. .++++++|+|+|+...++... ++..+.. +...++. +......++..+++.-.+-|+|
T Consensus 162 ~~---~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~-------~~~~g~~~~~~~l~~~~~~Lkp 230 (276)
T 2b3t_A 162 HI---LQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALV-------AADSGMADIVHIIEQSRNALVS 230 (276)
T ss_dssp EE---ECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTB-------CHHHHTHHHHHHHHHHGGGEEE
T ss_pred EE---EEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHc-------CCCcHHHHHHHHHHHHHHhcCC
Confidence 23 3456655 356789999999877776543 0000100 0000000 0011146778899998999999
Q ss_pred CceEEEEE
Q 036911 204 GGHVLLSI 211 (359)
Q Consensus 204 GG~l~~~~ 211 (359)
||++++..
T Consensus 231 gG~l~~~~ 238 (276)
T 2b3t_A 231 GGFLLLEH 238 (276)
T ss_dssp EEEEEEEC
T ss_pred CCEEEEEE
Confidence 99999863
No 175
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.91 E-value=5.1e-05 Score=72.04 Aligned_cols=99 Identities=12% Similarity=0.033 Sum_probs=64.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
....+|+|+|||+|+.|..++... +..+|+.-|+. +...+..++ ..+. .+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~---------------~ga~V~gIDis-----------~~~l~~Ar~~~~~~gl-~~ 173 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHV---------------YGMRVNVVEIE-----------PDIAELSRKVIEGLGV-DG 173 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHT---------------TCCEEEEEESS-----------HHHHHHHHHHHHHHTC-CS
T ss_pred CCcCEEEEECCCccHHHHHHHHHc---------------cCCEEEEEECC-----------HHHHHHHHHHHHhcCC-CC
Confidence 346899999999999887665221 34788888974 122222221 1233 13
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.|+. |+..+ +|++++|+|++... +| |...+|+.-.+.|+|||
T Consensus 174 v~~v~---gDa~~--l~d~~FDvV~~~a~------~~--------------------------d~~~~l~el~r~LkPGG 216 (298)
T 3fpf_A 174 VNVIT---GDETV--IDGLEFDVLMVAAL------AE--------------------------PKRRVFRNIHRYVDTET 216 (298)
T ss_dssp EEEEE---SCGGG--GGGCCCSEEEECTT------CS--------------------------CHHHHHHHHHHHCCTTC
T ss_pred eEEEE---Cchhh--CCCCCcCEEEECCC------cc--------------------------CHHHHHHHHHHHcCCCc
Confidence 34544 45554 36899999998543 12 23358888899999999
Q ss_pred eEEEEE
Q 036911 206 HVLLSI 211 (359)
Q Consensus 206 ~l~~~~ 211 (359)
+|++..
T Consensus 217 ~Lvv~~ 222 (298)
T 3fpf_A 217 RIIYRT 222 (298)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999865
No 176
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=1.7e-05 Score=72.67 Aligned_cols=105 Identities=11% Similarity=0.094 Sum_probs=63.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+.+++.+ ++..+|+..|+.. ......+. ..+...+-
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~-----------~~~~~a~~~~~~~g~~~~v 117 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMAREL--------------PADGQLLTLEADA-----------HHAQVARENLQLAGVDQRV 117 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEECCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEecCCchHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcE
Confidence 35799999999999999887221 2358899999742 11121211 12222122
Q ss_pred eEEecccCCccc---CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 127 CFIAGIPGSFYG---RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 127 ~f~~~v~gsFy~---~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
.++. |++.+ .+...+++|+|++.... .+...+|+.-.+-|+|
T Consensus 118 ~~~~---~d~~~~l~~~~~~~~fD~V~~d~~~--------------------------------~~~~~~l~~~~~~Lkp 162 (248)
T 3tfw_A 118 TLRE---GPALQSLESLGECPAFDLIFIDADK--------------------------------PNNPHYLRWALRYSRP 162 (248)
T ss_dssp EEEE---SCHHHHHHTCCSCCCCSEEEECSCG--------------------------------GGHHHHHHHHHHTCCT
T ss_pred EEEE---cCHHHHHHhcCCCCCeEEEEECCch--------------------------------HHHHHHHHHHHHhcCC
Confidence 3444 44432 33234599999984421 1223478888899999
Q ss_pred CceEEEEEecC
Q 036911 204 GGHVLLSIIGN 214 (359)
Q Consensus 204 GG~l~~~~~g~ 214 (359)
||++++.....
T Consensus 163 GG~lv~~~~~~ 173 (248)
T 3tfw_A 163 GTLIIGDNVVR 173 (248)
T ss_dssp TCEEEEECCSG
T ss_pred CeEEEEeCCCc
Confidence 99998866533
No 177
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.89 E-value=2e-05 Score=71.33 Aligned_cols=102 Identities=11% Similarity=0.095 Sum_probs=62.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+.+++ . .|..+|+..|+.. ......++ ..+...+-
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~--------~-------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v 124 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFAS--------I-------SDDIHVTTIERNE-----------TMIQYAKQNLATYHFENQV 124 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHT--------T-------CTTCEEEEEECCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEEeCchhHHHHHHHH--------h-------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcE
Confidence 357999999999999988762 1 1458899999741 11121211 12221122
Q ss_pred eEEecccCCcccCC--CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 127 CFIAGIPGSFYGRL--FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
.|+. +++.+.+ ..++++|+|++... . .++..||+.-.+-|+||
T Consensus 125 ~~~~---~d~~~~~~~~~~~~fD~V~~~~~---~-----------------------------~~~~~~l~~~~~~Lkpg 169 (232)
T 3ntv_A 125 RIIE---GNALEQFENVNDKVYDMIFIDAA---K-----------------------------AQSKKFFEIYTPLLKHQ 169 (232)
T ss_dssp EEEE---SCGGGCHHHHTTSCEEEEEEETT---S-----------------------------SSHHHHHHHHGGGEEEE
T ss_pred EEEE---CCHHHHHHhhccCCccEEEEcCc---H-----------------------------HHHHHHHHHHHHhcCCC
Confidence 3433 5654432 12689999996421 1 12335888888999999
Q ss_pred ceEEEEEe
Q 036911 205 GHVLLSII 212 (359)
Q Consensus 205 G~l~~~~~ 212 (359)
|++++...
T Consensus 170 G~lv~d~~ 177 (232)
T 3ntv_A 170 GLVITDNV 177 (232)
T ss_dssp EEEEEECT
T ss_pred eEEEEeeC
Confidence 99988443
No 178
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.89 E-value=9.6e-06 Score=72.62 Aligned_cols=107 Identities=12% Similarity=0.077 Sum_probs=63.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
.+.+|+|+|||+|..|+.+++.+ ++..+|+..|+.. ......++ ..+...+-
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v 112 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLL--------------QPGARLLTMEINP-----------DCAAITQQMLNFAGLQDKV 112 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHHTCGGGE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--------------CCCCEEEEEeCCh-----------HHHHHHHHHHHHcCCCCce
Confidence 35799999999999999887221 2357899999742 11111111 12221112
Q ss_pred eEEecccCCcccCC--CC----CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHh
Q 036911 127 CFIAGIPGSFYGRL--FP----NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEE 200 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--fp----~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~E 200 (359)
.++. |++.+.+ ++ .+++|+|++....|+... ...++... +-
T Consensus 113 ~~~~---~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~-----------------------------~~~~~~~~-~~ 159 (221)
T 3u81_A 113 TILN---GASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLP-----------------------------DTLLLEKC-GL 159 (221)
T ss_dssp EEEE---SCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHH-----------------------------HHHHHHHT-TC
T ss_pred EEEE---CCHHHHHHHHHHhcCCCceEEEEEcCCcccchH-----------------------------HHHHHHhc-cc
Confidence 3333 4543321 12 278999999776665322 12356555 88
Q ss_pred hccCceEEEEEecC
Q 036911 201 ILSGGHVLLSIIGN 214 (359)
Q Consensus 201 L~pGG~l~~~~~g~ 214 (359)
|+|||++++.....
T Consensus 160 LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 160 LRKGTVLLADNVIV 173 (221)
T ss_dssp CCTTCEEEESCCCC
T ss_pred cCCCeEEEEeCCCC
Confidence 99999998865443
No 179
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.88 E-value=3.2e-06 Score=76.39 Aligned_cols=82 Identities=21% Similarity=0.128 Sum_probs=52.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.+++ . ..+|+..|+.. ......+. ..+...+-
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~--------~---------~~~v~~vD~s~-----------~~~~~a~~~~~~~~~~~~~ 129 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFAL--------T---------GMRVIAIDIDP-----------VKIALARNNAEVYGIADKI 129 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHH--------T---------TCEEEEEESCH-----------HHHHHHHHHHHHTTCGGGE
T ss_pred CCCEEEECccccCHHHHHHHH--------c---------CCEEEEEECCH-----------HHHHHHHHHHHHcCCCcCe
Confidence 357999999999999998862 1 16788888742 11111211 11210012
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCC
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPE 163 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~ 163 (359)
.|+. +++...+ +++++|+|+++..+||......
T Consensus 130 ~~~~---~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~ 162 (241)
T 3gdh_A 130 EFIC---GDFLLLA-SFLKADVVFLSPPWGGPDYATA 162 (241)
T ss_dssp EEEE---SCHHHHG-GGCCCSEEEECCCCSSGGGGGS
T ss_pred EEEE---CChHHhc-ccCCCCEEEECCCcCCcchhhh
Confidence 3333 5776544 7789999999999999877554
No 180
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.88 E-value=7e-05 Score=68.22 Aligned_cols=163 Identities=8% Similarity=-0.054 Sum_probs=77.9
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..++.+++.. |..+|+..|+.. ......+. ..+...+-.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~---------------~~~~v~gvD~s~-----------~~~~~a~~~~~~~~~~~~v~ 119 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATL---------------NGWYFLATEVDD-----------MCFNYAKKNVEQNNLSDLIK 119 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHH---------------HCCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTEE
T ss_pred CCEEEEeCCChhHHHHHHHHhC---------------CCCeEEEEECCH-----------HHHHHHHHHHHHcCCCccEE
Confidence 5699999999999998877432 237888889742 11111111 122211123
Q ss_pred EEecccCCccc---CCCC---CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 128 FIAGIPGSFYG---RLFP---NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 128 f~~~v~gsFy~---~lfp---~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
|+. ++..+ ..++ ++++|+|+|+-..|+...-...+.. ..+ ....+...++..-++-|
T Consensus 120 ~~~---~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~--------~~~------~~~~~~~~l~~~~~~~L 182 (254)
T 2h00_A 120 VVK---VPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNS--------RNP------RRPPPSSVNTGGITEIM 182 (254)
T ss_dssp EEE---CCTTCSSTTTSTTCCSCCBSEEEECCCCC---------------------------------------CTTTTH
T ss_pred EEE---cchhhhhhhhhhcccCCcccEEEECCCCccCcchhccccc--------ccc------cccCCHHHHhhhHHHHE
Confidence 444 34322 1344 3689999998776664410010100 000 00111223455557788
Q ss_pred ccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEE
Q 036911 202 LSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDI 279 (359)
Q Consensus 202 ~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~ 279 (359)
+|||.+.+.. .++..+..-+...|.+..+ .-..++.+++.+.+++.| |+..+...
T Consensus 183 kpgG~l~~~~---------------~~~~~~~~~l~~~g~~~~~-------~~~~~~~~~~~~~l~~~G-f~~v~~~~ 237 (254)
T 2h00_A 183 AEGGELEFVK---------------RIIHDSLQLKKRLRWYSCM-------LGKKCSLAPLKEELRIQG-VPKVTYTE 237 (254)
T ss_dssp HHHTHHHHHH---------------HHHHHHHHHGGGBSCEEEE-------ESSTTSHHHHHHHHHHTT-CSEEEEEE
T ss_pred ecCCEEEEEH---------------HHHHHHHhcccceEEEEEC-------CCChhHHHHHHHHHHHcC-CCceEEEE
Confidence 9999874431 1222222222222321110 112345689999999999 87555443
No 181
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.87 E-value=0.00011 Score=66.94 Aligned_cols=49 Identities=8% Similarity=0.045 Sum_probs=33.4
Q ss_pred CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 142 PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 142 p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
+.+++|+|+|+..++-..+.+. .....+...||+.-.+-|+|||+++++
T Consensus 165 ~~~~fD~Iv~npp~~~~~~~~~--------------------~~~~~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 165 AGSAPDVVLTDLPYGERTHWEG--------------------QVPGQPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp TTCCCSEEEEECCGGGSSSSSS--------------------CCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCceEEEeCCCeeccccccc--------------------cccccHHHHHHHHHHHhcCCCcEEEEe
Confidence 3458999999765544332221 011356667998889999999999983
No 182
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.85 E-value=4.3e-05 Score=69.65 Aligned_cols=118 Identities=17% Similarity=0.182 Sum_probs=64.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---h----CC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---K----GS 122 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~----~~ 122 (359)
...+|+|+|||+|..++.+++. .|...++..|.... . +.......... . +.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~---------------~~~~~v~gvD~s~~-~------l~~a~~~~~~~~~~~~~~~~~ 106 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPA---------------FPEDLILGMEIRVQ-V------TNYVEDRIIALRNNTASKHGF 106 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHH---------------STTSEEEEEESCHH-H------HHHHHHHHHHHHHTC-CCSTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---------------CCCCCEEEEEcCHH-H------HHHHHHHHHHHhhccccccCC
Confidence 3578999999999999888732 15578999997421 0 00000111110 0 11
Q ss_pred CCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 123 NFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.+-.++.+-.-++....++++++|.++....=.|... .+ .+..+ --..||+.-++-|+
T Consensus 107 -~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~--------~~---~~~r~----------~~~~~l~~~~~~Lk 164 (246)
T 2vdv_E 107 -QNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQ--------RK---HKARI----------ITNTLLSEYAYVLK 164 (246)
T ss_dssp -TTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSC----------CCHHHHHHHHHHEE
T ss_pred -CcEEEEeccHHHHHHHhccccccCEEEEECCCccccc--------ch---hHHhh----------ccHHHHHHHHHHcC
Confidence 1223444322233344578899999986442222111 00 00000 01358888899999
Q ss_pred cCceEEEEE
Q 036911 203 SGGHVLLSI 211 (359)
Q Consensus 203 pGG~l~~~~ 211 (359)
|||+|++.+
T Consensus 165 pgG~l~~~t 173 (246)
T 2vdv_E 165 EGGVVYTIT 173 (246)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEEe
Confidence 999999965
No 183
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.84 E-value=4.6e-05 Score=73.51 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=60.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+. ..-... .... +..+...+-.+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~V~~vD~s--~~~~~a------~~~~-~~~~l~~~v~~- 103 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAS--TMAQHA------EVLV-KSNNLTDRIVV- 103 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEECS--THHHHH------HHHH-HHTTCTTTEEE-
T ss_pred CcCEEEEcCCCccHHHHHHH--------hC--------CCCEEEEECCH--HHHHHH------HHHH-HHcCCCCcEEE-
Confidence 35799999999999888765 21 23588999974 211110 1111 11222112222
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
+.+++.+..+| +++|+|+|...++.+.. . ++..+|..-.+-|+|||++++
T Consensus 104 --~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~--~-------------------------~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 104 --IPGKVEEVSLP-EQVDIIISEPMGYMLFN--E-------------------------RMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp --EESCTTTCCCS-SCEEEEEECCCBTTBTT--T-------------------------SHHHHHHHGGGGEEEEEEEES
T ss_pred --EEcchhhCCCC-CceeEEEEeCchhcCCh--H-------------------------HHHHHHHHHHhhcCCCeEEEE
Confidence 34566554444 78999999866543221 1 111234344589999999986
Q ss_pred EE
Q 036911 210 SI 211 (359)
Q Consensus 210 ~~ 211 (359)
..
T Consensus 154 ~~ 155 (348)
T 2y1w_A 154 TI 155 (348)
T ss_dssp CE
T ss_pred ec
Confidence 54
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.84 E-value=1.1e-05 Score=73.02 Aligned_cols=100 Identities=16% Similarity=0.123 Sum_probs=62.4
Q ss_pred ceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCC-CCCe
Q 036911 52 LKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSN-FGPC 127 (359)
Q Consensus 52 ~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~-~~~~ 127 (359)
.+|+|+|||+|..|+.+++.+ ++..+|+..|+.. ......++ ..+.. .+-.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~g~~~~~i~ 112 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGL--------------ADNTTLTCIDPES-----------EHQRQAKALFREAGYSPSRVR 112 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHS--------------CTTSEEEEECSCH-----------HHHHHHHHHHHHTTCCGGGEE
T ss_pred CCEEEEcCCchHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCcCcEE
Confidence 499999999999999887432 3458899999742 11121211 12221 1122
Q ss_pred EEecccCCcccCC--CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 128 FIAGIPGSFYGRL--FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 128 f~~~v~gsFy~~l--fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
++ .|+..+.+ ++++++|+||+... ..++..|++.-.+-|+|||
T Consensus 113 ~~---~gda~~~l~~~~~~~fD~V~~d~~--------------------------------~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 113 FL---LSRPLDVMSRLANDSYQLVFGQVS--------------------------------PMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp EE---CSCHHHHGGGSCTTCEEEEEECCC--------------------------------TTTHHHHHHHHHHHEEEEE
T ss_pred EE---EcCHHHHHHHhcCCCcCeEEEcCc--------------------------------HHHHHHHHHHHHHHcCCCc
Confidence 33 35554433 34689999997431 1133458888889999999
Q ss_pred eEEEEE
Q 036911 206 HVLLSI 211 (359)
Q Consensus 206 ~l~~~~ 211 (359)
++++..
T Consensus 158 ~lv~dn 163 (221)
T 3dr5_A 158 ALVLAD 163 (221)
T ss_dssp EEEETT
T ss_pred EEEEeC
Confidence 999843
No 185
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.83 E-value=0.00011 Score=69.42 Aligned_cols=109 Identities=13% Similarity=0.081 Sum_probs=64.7
Q ss_pred CcceEEeecCCCCcc----hHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCC
Q 036911 50 ECLKIADLGCSSGPN----TLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFG 125 (359)
Q Consensus 50 ~~~~IaDlGCs~G~n----t~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~ 125 (359)
...+|+|+|||+|.+ +..+. +.. ++..+|+..|+... ++ +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a--------~~~------~~~~~V~gvDis~~--------v~--------------~ 106 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLR--------QWL------PTGTLLVDSDLNDF--------VS--------------D 106 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHH--------HHS------CTTCEEEEEESSCC--------BC--------------S
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHH--------HHc------CCCCEEEEEECCCC--------CC--------------C
Confidence 357999999988443 22221 221 23578999998642 11 1
Q ss_pred CeE-EecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 126 PCF-IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 126 ~~f-~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
-.| +. |++.+..++ +++|+|+|+.+.+|.-.... + .......+..+|+.-.+-|+||
T Consensus 107 v~~~i~---gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~---d---------------~~~~~~l~~~~l~~a~r~LkpG 164 (290)
T 2xyq_A 107 ADSTLI---GDCATVHTA-NKWDLIISDMYDPRTKHVTK---E---------------NDSKEGFFTYLCGFIKQKLALG 164 (290)
T ss_dssp SSEEEE---SCGGGCCCS-SCEEEEEECCCCCC---CCS---C---------------CCCCCTHHHHHHHHHHHHEEEE
T ss_pred CEEEEE---CccccCCcc-CcccEEEEcCCccccccccc---c---------------ccchHHHHHHHHHHHHHhcCCC
Confidence 234 33 576654443 78999999866554211000 0 0011344567888889999999
Q ss_pred ceEEEEEecCCC
Q 036911 205 GHVLLSIIGNDR 216 (359)
Q Consensus 205 G~l~~~~~g~~~ 216 (359)
|+|++..+....
T Consensus 165 G~~v~~~~~~~~ 176 (290)
T 2xyq_A 165 GSIAVKITEHSW 176 (290)
T ss_dssp EEEEEEECSSSC
T ss_pred cEEEEEEeccCC
Confidence 999997765433
No 186
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.81 E-value=3.3e-05 Score=73.59 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=69.1
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh-hC-C-CCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV-KG-S-NFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~-~~-~-~~~ 125 (359)
+.+.+|+|+|||+|..+..++ +. .+..+++..|+.. +.-.+.+ ..+... .+ . ..+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~-~~i~~ar------~~~~~~~~~~~~~~~ 133 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVL--------KH-------PTVEKAVMVDIDG-ELVEVAK------RHMPEWHQGAFDDPR 133 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHT--------TS-------TTCCEEEEEESCH-HHHHHHH------HHCHHHHTTGGGCTT
T ss_pred CCCCeEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECCH-HHHHHHH------HHhHhhccccccCCc
Confidence 456899999999999888775 21 2346888888742 1111110 001100 01 0 112
Q ss_pred CeEEecccCCcccCC-CCCCceeEEEecccccc-cccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 126 PCFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHW-LSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 126 ~~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhW-ls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
-.++. ++..+-+ .+++++|+|++....|| ++..+..+ ....|++.-++-|+|
T Consensus 134 v~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l-----------------------~~~~~l~~~~~~Lkp 187 (314)
T 1uir_A 134 AVLVI---DDARAYLERTEERYDVVIIDLTDPVGEDNPARLL-----------------------YTVEFYRLVKAHLNP 187 (314)
T ss_dssp EEEEE---SCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGG-----------------------SSHHHHHHHHHTEEE
T ss_pred eEEEE---chHHHHHHhcCCCccEEEECCCCcccccCcchhc-----------------------cHHHHHHHHHHhcCC
Confidence 23333 3443211 25789999999888877 22212111 123589999999999
Q ss_pred CceEEEEEecC
Q 036911 204 GGHVLLSIIGN 214 (359)
Q Consensus 204 GG~l~~~~~g~ 214 (359)
||+|++.....
T Consensus 188 gG~lv~~~~~~ 198 (314)
T 1uir_A 188 GGVMGMQTGMI 198 (314)
T ss_dssp EEEEEEEEEEE
T ss_pred CcEEEEEccCc
Confidence 99999986544
No 187
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.76 E-value=9.2e-05 Score=69.11 Aligned_cols=114 Identities=14% Similarity=0.116 Sum_probs=64.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHH----HhhCCC---
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLK----EVKGSN--- 123 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~----~~~~~~--- 123 (359)
..+|+|+|||+|..++.+. +. ...+|+..|+++.+.-... ..... ...+..
T Consensus 80 ~~~vLDlG~G~G~~~~~~a--------~~--------~~~~v~~~D~s~~~~~~~a------~~n~~~N~~~~~~~~~~~ 137 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAF--------LA--------GADQVVATDYPDPEILNSL------ESNIREHTANSCSSETVK 137 (281)
T ss_dssp TCEEEETTCTTSHHHHHHH--------HT--------TCSEEEEEECSCHHHHHHH------HHHHHTTCC---------
T ss_pred CCeEEEecccccHHHHHHH--------Hc--------CCCEEEEEeCCCHHHHHHH------HHHHHHhhhhhcccccCC
Confidence 4699999999999888665 21 1148999998422211111 01110 001100
Q ss_pred -CCCeEEecccCCcccCCC---CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 124 -FGPCFIAGIPGSFYGRLF---PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 124 -~~~~f~~~v~gsFy~~lf---p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
.+-.+....-++....+. +++++|+|+++.++++.... ..+|+.-.+
T Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~-----------------------------~~ll~~l~~ 188 (281)
T 3bzb_A 138 RASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAH-----------------------------DALLRSVKM 188 (281)
T ss_dssp -CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGH-----------------------------HHHHHHHHH
T ss_pred CCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHH-----------------------------HHHHHHHHH
Confidence 011222222233222232 56899999999998884442 247778888
Q ss_pred hhc---c--CceEEEEEecCC
Q 036911 200 EIL---S--GGHVLLSIIGND 215 (359)
Q Consensus 200 EL~---p--GG~l~~~~~g~~ 215 (359)
-|+ | ||++++.+..+.
T Consensus 189 ~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 189 LLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp HBCCTTTCTTCEEEEEECC--
T ss_pred HhcccCCCCCCEEEEEEEeee
Confidence 899 9 999988765543
No 188
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.75 E-value=7.4e-05 Score=65.92 Aligned_cols=108 Identities=18% Similarity=0.119 Sum_probs=62.7
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|..+++. ..+|+..|+.... .++ +-.|+
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~-----------------~~~V~gvD~~~~~------~~~--------------~v~~~ 67 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL-----------------ARKIISIDLQEME------EIA--------------GVRFI 67 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-----------------CSEEEEEESSCCC------CCT--------------TCEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHc-----------------CCcEEEEeccccc------cCC--------------CeEEE
Confidence 4689999999999998877511 3678888875320 000 12333
Q ss_pred ecccCCcccCC--------CC---CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHH
Q 036911 130 AGIPGSFYGRL--------FP---NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRS 198 (359)
Q Consensus 130 ~~v~gsFy~~l--------fp---~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra 198 (359)
. |++.+.. ++ .+++|+|+|..+..+.-... .+ .. .........|+.-.
T Consensus 68 ~---~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~---~d---------~~------~~~~l~~~~l~~a~ 126 (191)
T 3dou_A 68 R---CDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPS---RD---------HA------VSYQIGQRVMEIAV 126 (191)
T ss_dssp E---CCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHH---HH---------HH------HHHHHHHHHHHHHH
T ss_pred E---ccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcc---cC---------HH------HHHHHHHHHHHHHH
Confidence 3 5554432 11 14899999975433210000 00 00 00122345677778
Q ss_pred HhhccCceEEEEEecCC
Q 036911 199 EEILSGGHVLLSIIGND 215 (359)
Q Consensus 199 ~EL~pGG~l~~~~~g~~ 215 (359)
+-|+|||.|++.++...
T Consensus 127 ~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 127 RYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHEEEEEEEEEEEECST
T ss_pred HHccCCCEEEEEEcCCC
Confidence 89999999999887443
No 189
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.75 E-value=2.7e-05 Score=65.85 Aligned_cols=103 Identities=16% Similarity=0.043 Sum_probs=60.6
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+. +. .+ .++..|+.. ...+..+. ..+. +-
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~--------~~-------~~--~v~~vD~~~-----------~~~~~a~~~~~~~~~--~~ 90 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAA--------SE-------GW--EAVLVEKDP-----------EAVRLLKENVRRTGL--GA 90 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHH--------HT-------TC--EEEEECCCH-----------HHHHHHHHHHHHHTC--CC
T ss_pred CCCeEEEeCCCcCHHHHHHH--------HC-------CC--eEEEEeCCH-----------HHHHHHHHHHHHcCC--ce
Confidence 35799999999999988776 22 13 388888742 11111111 1121 22
Q ss_pred eEEecccCCcccCCC--C--CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHH--HHh
Q 036911 127 CFIAGIPGSFYGRLF--P--NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSR--SEE 200 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf--p--~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~R--a~E 200 (359)
.++. +++.+.+. + ++++|+++++..+| ...+. +++.- .+-
T Consensus 91 ~~~~---~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~-----------------------------~~~~~~~~~~ 136 (171)
T 1ws6_A 91 RVVA---LPVEVFLPEAKAQGERFTVAFMAPPYA--MDLAA-----------------------------LFGELLASGL 136 (171)
T ss_dssp EEEC---SCHHHHHHHHHHTTCCEEEEEECCCTT--SCTTH-----------------------------HHHHHHHHTC
T ss_pred EEEe---ccHHHHHHhhhccCCceEEEEECCCCc--hhHHH-----------------------------HHHHHHhhcc
Confidence 3333 45543211 1 34899999987766 22221 23232 477
Q ss_pred hccCceEEEEEecCCC
Q 036911 201 ILSGGHVLLSIIGNDR 216 (359)
Q Consensus 201 L~pGG~l~~~~~g~~~ 216 (359)
|+|||+++++......
T Consensus 137 L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 137 VEAGGLYVLQHPKDLY 152 (171)
T ss_dssp EEEEEEEEEEEETTSC
T ss_pred cCCCcEEEEEeCCccC
Confidence 9999999998876654
No 190
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.75 E-value=3.6e-05 Score=66.15 Aligned_cols=107 Identities=9% Similarity=-0.078 Sum_probs=62.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+.. ...+..+. ..+...+-
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~--------~~--------~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~~ 96 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV--------SR--------GMDKSICIEKNF-----------AALKVIKENIAITKEPEKF 96 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH--------HT--------TCSEEEEEESCH-----------HHHHHHHHHHHHHTCGGGE
T ss_pred CCCCEEEeCCccCHHHHHHH--------Hc--------CCCEEEEEECCH-----------HHHHHHHHHHHHhCCCcce
Confidence 35799999999999988765 21 236888889742 11111111 11111011
Q ss_pred eEEecccCCcccCC----CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHH--HHh
Q 036911 127 CFIAGIPGSFYGRL----FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSR--SEE 200 (359)
Q Consensus 127 ~f~~~v~gsFy~~l----fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~R--a~E 200 (359)
.++ .+++.+.+ ++++++|+++++..+|+-. ...+++.- .+-
T Consensus 97 ~~~---~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~------------------------------~~~~~~~l~~~~~ 143 (187)
T 2fhp_A 97 EVR---KMDANRALEQFYEEKLQFDLVLLDPPYAKQE------------------------------IVSQLEKMLERQL 143 (187)
T ss_dssp EEE---ESCHHHHHHHHHHTTCCEEEEEECCCGGGCC------------------------------HHHHHHHHHHTTC
T ss_pred EEE---ECcHHHHHHHHHhcCCCCCEEEECCCCCchh------------------------------HHHHHHHHHHhcc
Confidence 233 35665422 2378999999976644211 11233333 667
Q ss_pred hccCceEEEEEecCCC
Q 036911 201 ILSGGHVLLSIIGNDR 216 (359)
Q Consensus 201 L~pGG~l~~~~~g~~~ 216 (359)
|+|||++++.......
T Consensus 144 L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 144 LTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEEEEEEEEEEETTCC
T ss_pred cCCCCEEEEEeCCccc
Confidence 9999999998876654
No 191
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.75 E-value=3.4e-05 Score=68.28 Aligned_cols=104 Identities=13% Similarity=0.041 Sum_probs=61.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCC-CCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSN-FGP 126 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~-~~~ 126 (359)
..+|+|+|||+|..++.++ .+ .. .+|+..|+.. ...+..+. ..+.. .+-
T Consensus 54 ~~~vLDlGcGtG~~~~~~~--------~~-------~~-~~v~gvD~s~-----------~~l~~a~~~~~~~~~~~~~v 106 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL--------SR-------QA-KKVTFLELDK-----------TVANQLKKNLQTLKCSSEQA 106 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT-------TC-SEEEEECSCH-----------HHHHHHHHHHHHTTCCTTTE
T ss_pred CCeEEEcCCccCHHHHHHH--------Hc-------cC-CEEEEEECCH-----------HHHHHHHHHHHHhCCCccce
Confidence 4699999999999988765 21 12 5788889742 11121211 11210 122
Q ss_pred eEEecccCCcccCCC--CCCc-eeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHH--HHhh
Q 036911 127 CFIAGIPGSFYGRLF--PNKS-LHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSR--SEEI 201 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf--p~~S-~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~R--a~EL 201 (359)
.|+ .+++.+.+. ++++ +|+|+++..+|+ . +...+|+.- .+-|
T Consensus 107 ~~~---~~d~~~~~~~~~~~~~fD~I~~~~~~~~-~-----------------------------~~~~~l~~~~~~~~L 153 (201)
T 2ift_A 107 EVI---NQSSLDFLKQPQNQPHFDVVFLDPPFHF-N-----------------------------LAEQAISLLCENNWL 153 (201)
T ss_dssp EEE---CSCHHHHTTSCCSSCCEEEEEECCCSSS-C-----------------------------HHHHHHHHHHHTTCE
T ss_pred EEE---ECCHHHHHHhhccCCCCCEEEECCCCCC-c-----------------------------cHHHHHHHHHhcCcc
Confidence 233 356654433 3678 999999766442 1 122355443 3459
Q ss_pred ccCceEEEEEecC
Q 036911 202 LSGGHVLLSIIGN 214 (359)
Q Consensus 202 ~pGG~l~~~~~g~ 214 (359)
+|||+++++....
T Consensus 154 kpgG~l~i~~~~~ 166 (201)
T 2ift_A 154 KPNALIYVETEKD 166 (201)
T ss_dssp EEEEEEEEEEESS
T ss_pred CCCcEEEEEECCC
Confidence 9999999988654
No 192
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.74 E-value=0.00011 Score=65.08 Aligned_cols=104 Identities=8% Similarity=-0.057 Sum_probs=60.8
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~~ 127 (359)
..+|+|+|||+|..++.++ ++ .. .+|+..|+.. ...+..+.. .+. .+-.
T Consensus 55 ~~~vLDlgcG~G~~~~~l~--------~~-------~~-~~V~~vD~s~-----------~~l~~a~~~~~~~~~-~~v~ 106 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL--------SR-------YA-AGATLIEMDR-----------AVSQQLIKNLATLKA-GNAR 106 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT-------TC-SEEEEECSCH-----------HHHHHHHHHHHHTTC-CSEE
T ss_pred CCeEEEeCCCcCHHHHHHH--------hc-------CC-CEEEEEECCH-----------HHHHHHHHHHHHcCC-CcEE
Confidence 4699999999999998765 21 11 4788889742 121212211 121 1122
Q ss_pred EEecccCCccc-CCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHH--HhhccC
Q 036911 128 FIAGIPGSFYG-RLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRS--EEILSG 204 (359)
Q Consensus 128 f~~~v~gsFy~-~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra--~EL~pG 204 (359)
|+ .+++.+ ...+++++|++++...+|+ . +...+++.-. +-|+||
T Consensus 107 ~~---~~D~~~~~~~~~~~fD~V~~~~p~~~--~----------------------------~~~~~l~~l~~~~~L~pg 153 (202)
T 2fpo_A 107 VV---NSNAMSFLAQKGTPHNIVFVDPPFRR--G----------------------------LLEETINLLEDNGWLADE 153 (202)
T ss_dssp EE---CSCHHHHHSSCCCCEEEEEECCSSST--T----------------------------THHHHHHHHHHTTCEEEE
T ss_pred EE---ECCHHHHHhhcCCCCCEEEECCCCCC--C----------------------------cHHHHHHHHHhcCccCCC
Confidence 33 356654 2346679999999665553 0 1122444333 349999
Q ss_pred ceEEEEEecCC
Q 036911 205 GHVLLSIIGND 215 (359)
Q Consensus 205 G~l~~~~~g~~ 215 (359)
|+++++.....
T Consensus 154 G~l~i~~~~~~ 164 (202)
T 2fpo_A 154 ALIYVESEVEN 164 (202)
T ss_dssp EEEEEEEEGGG
T ss_pred cEEEEEECCCc
Confidence 99998886543
No 193
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.74 E-value=4.1e-05 Score=70.05 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=65.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
++.+|+|+|||+|..|+.+++.+ ++..+|+..|+... . +......+. ..+...+-.++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~--------------~~~~~v~~iD~~~~-~------~~~a~~~~~-~~g~~~~i~~~ 117 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLAL--------------PDDGQVITCDINEG-W------TKHAHPYWR-EAKQEHKIKLR 117 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTS--------------CTTCEEEEEECCCS-S------CCCSHHHHH-HTTCTTTEEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhC--------------CCCCEEEEEECCHH-H------HHHHHHHHH-HcCCCCcEEEE
Confidence 35799999999999999887322 23578999998532 1 111111121 12221122333
Q ss_pred ecccCCcccCCCC------CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 130 AGIPGSFYGRLFP------NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 130 ~~v~gsFy~~lfp------~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
. |+..+.+.. ++++|+|++... ..++..+|+.-.+-|+|
T Consensus 118 ~---gda~~~l~~~~~~~~~~~fD~V~~d~~--------------------------------~~~~~~~l~~~~~~Lkp 162 (242)
T 3r3h_A 118 L---GPALDTLHSLLNEGGEHQFDFIFIDAD--------------------------------KTNYLNYYELALKLVTP 162 (242)
T ss_dssp E---SCHHHHHHHHHHHHCSSCEEEEEEESC--------------------------------GGGHHHHHHHHHHHEEE
T ss_pred E---cCHHHHHHHHhhccCCCCEeEEEEcCC--------------------------------hHHhHHHHHHHHHhcCC
Confidence 3 455443321 589999998532 12344588888899999
Q ss_pred CceEEEEEecC
Q 036911 204 GGHVLLSIIGN 214 (359)
Q Consensus 204 GG~l~~~~~g~ 214 (359)
||++++.....
T Consensus 163 GG~lv~d~~~~ 173 (242)
T 3r3h_A 163 KGLIAIDNIFW 173 (242)
T ss_dssp EEEEEEECSSS
T ss_pred CeEEEEECCcc
Confidence 99999976543
No 194
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.72 E-value=4e-05 Score=76.47 Aligned_cols=112 Identities=12% Similarity=0.056 Sum_probs=62.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhc-ccchHHHHHHhhCCCCCCe-
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKS-LPGFYEKLKEVKGSNFGPC- 127 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~-l~~~~~~~~~~~~~~~~~~- 127 (359)
...+|+|+|||+|..++.+++.. +..+|+.-|+... .-.+... +......+. ..|....++
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~---------------g~~~V~GVDis~~-~l~~A~~Ml~~ar~~~~-~~Gl~~~nV~ 304 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC---------------GCALSFGCEIMDD-ASDLTILQYEELKKRCK-LYGMRLNNVE 304 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---------------CCSEEEEEECCHH-HHHHHHHHHHHHHHHHH-HTTBCCCCEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC---------------CCCEEEEEeCCHH-HHHHHHHhHHHHHHHHH-HcCCCCCceE
Confidence 45799999999999999887432 2357888887421 0000000 000011111 112111222
Q ss_pred EEecccCCcccC-CC--CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 128 FIAGIPGSFYGR-LF--PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 128 f~~~v~gsFy~~-lf--p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
|+.+ +++... .+ +.+++|+|+++.++++ .+ +...|+...+.|+||
T Consensus 305 ~i~g--D~~~~~~~~~~~~~~FDvIvvn~~l~~-~d-----------------------------~~~~L~el~r~LKpG 352 (433)
T 1u2z_A 305 FSLK--KSFVDNNRVAELIPQCDVILVNNFLFD-ED-----------------------------LNKKVEKILQTAKVG 352 (433)
T ss_dssp EEES--SCSTTCHHHHHHGGGCSEEEECCTTCC-HH-----------------------------HHHHHHHHHTTCCTT
T ss_pred EEEc--CccccccccccccCCCCEEEEeCcccc-cc-----------------------------HHHHHHHHHHhCCCC
Confidence 3332 234221 12 2478999999877632 22 234677888999999
Q ss_pred ceEEEE
Q 036911 205 GHVLLS 210 (359)
Q Consensus 205 G~l~~~ 210 (359)
|+|++.
T Consensus 353 G~lVi~ 358 (433)
T 1u2z_A 353 CKIISL 358 (433)
T ss_dssp CEEEES
T ss_pred eEEEEe
Confidence 999886
No 195
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.71 E-value=4.9e-05 Score=69.29 Aligned_cols=102 Identities=11% Similarity=-0.039 Sum_probs=60.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
+.+|+|+|||+|..|..+++.+ +.. .|..+|+..|+... .-... + .. ..+-.|+.
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~-----~~~------~~~~~V~gvD~s~~-~l~~a----------~-~~--~~~v~~~~ 136 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLT-----KIM------GIDCQVIGIDRDLS-RCQIP----------A-SD--MENITLHQ 136 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHH-----HHT------TCCCEEEEEESCCT-TCCCC----------G-GG--CTTEEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhh-----hhc------CCCCEEEEEeCChH-HHHHH----------h-cc--CCceEEEE
Confidence 4699999999999999887432 110 14578999997532 10000 0 00 00223443
Q ss_pred cccCCcccC---CC-CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH-hhccCc
Q 036911 131 GIPGSFYGR---LF-PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE-EILSGG 205 (359)
Q Consensus 131 ~v~gsFy~~---lf-p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~-EL~pGG 205 (359)
|+.... .+ ...++|++++..+ | . +...+|..-++ -|+|||
T Consensus 137 ---gD~~~~~~l~~~~~~~fD~I~~d~~-~--~-----------------------------~~~~~l~~~~r~~LkpGG 181 (236)
T 2bm8_A 137 ---GDCSDLTTFEHLREMAHPLIFIDNA-H--A-----------------------------NTFNIMKWAVDHLLEEGD 181 (236)
T ss_dssp ---CCSSCSGGGGGGSSSCSSEEEEESS-C--S-----------------------------SHHHHHHHHHHHTCCTTC
T ss_pred ---CcchhHHHHHhhccCCCCEEEECCc-h--H-----------------------------hHHHHHHHHHHhhCCCCC
Confidence 455432 22 2347999987554 3 1 22347776675 999999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
+|++...
T Consensus 182 ~lv~~d~ 188 (236)
T 2bm8_A 182 YFIIEDM 188 (236)
T ss_dssp EEEECSC
T ss_pred EEEEEeC
Confidence 9998653
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.70 E-value=4.1e-05 Score=69.26 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=25.8
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
..+|+|+|||+|..+..+++.+ ++..+++..|..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~ 94 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASAL--------------PEDGKILCCDVS 94 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHS--------------CTTCEEEEEESC
T ss_pred cCEEEEEeCCCCHHHHHHHHhC--------------CCCCEEEEEECC
Confidence 5799999999999999887332 124678888863
No 197
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.68 E-value=8.3e-05 Score=70.58 Aligned_cols=115 Identities=12% Similarity=0.047 Sum_probs=63.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH-hhCC-CCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE-VKGS-NFGP 126 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~-~~~~-~~~~ 126 (359)
+++.+|+|+|||+|..+..++ ++ .+..+++..|+.. +.-.+.+. .+.. ..+. ..+-
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~-~~i~~ar~------~~~~~~~~~~~~rv 151 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVV--------KH-------PSVESVVQCEIDE-DVIQVSKK------FLPGMAIGYSSSKL 151 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESCH-HHHHHHHH------HCHHHHGGGGCTTE
T ss_pred CCCCEEEEECCCchHHHHHHH--------Hc-------CCCCEEEEEECCH-HHHHHHHH------HhHHhhcccCCCcE
Confidence 456899999999999988775 21 2447888888742 11111110 0000 0010 1122
Q ss_pred eEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.++. ++..+-+ .+++++|+|++....+|-. +..+ ....|++.-.+-|+|||
T Consensus 152 ~v~~---~Da~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l-----------------------~~~~~l~~~~~~LkpgG 203 (304)
T 2o07_A 152 TLHV---GDGFEFMKQNQDAFDVIITDSSDPMGP--AESL-----------------------FKESYYQLMKTALKEDG 203 (304)
T ss_dssp EEEE---SCHHHHHHTCSSCEEEEEEECC------------------------------------CHHHHHHHHHEEEEE
T ss_pred EEEE---CcHHHHHhhCCCCceEEEECCCCCCCc--chhh-----------------------hHHHHHHHHHhccCCCe
Confidence 2333 4443311 2568999999977665521 1101 11248888899999999
Q ss_pred eEEEEEec
Q 036911 206 HVLLSIIG 213 (359)
Q Consensus 206 ~l~~~~~g 213 (359)
++++....
T Consensus 204 ~lv~~~~~ 211 (304)
T 2o07_A 204 VLCCQGEC 211 (304)
T ss_dssp EEEEEEEC
T ss_pred EEEEecCC
Confidence 99998754
No 198
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.68 E-value=2.8e-05 Score=69.24 Aligned_cols=104 Identities=11% Similarity=0.038 Sum_probs=62.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|..+++.+ ++..+++..|+.. ......++ ..+...+-
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v 112 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGL--------------SSGGRVVTLEASE-----------KHADIARSNIERANLNDRV 112 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTC--------------CSSCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEecCCccHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcE
Confidence 35799999999999999887221 2357899999742 11111111 12221112
Q ss_pred eEEecccCCcccCCC--C---CCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 127 CFIAGIPGSFYGRLF--P---NKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf--p---~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
.++. |++.+.+. + .+++|+|++....+ +...+|+.-.+-|
T Consensus 113 ~~~~---~d~~~~~~~~~~~~~~~fD~v~~d~~~~--------------------------------~~~~~l~~~~~~L 157 (223)
T 3duw_A 113 EVRT---GLALDSLQQIENEKYEPFDFIFIDADKQ--------------------------------NNPAYFEWALKLS 157 (223)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCCCSEEEECSCGG--------------------------------GHHHHHHHHHHTC
T ss_pred EEEE---cCHHHHHHHHHhcCCCCcCEEEEcCCcH--------------------------------HHHHHHHHHHHhc
Confidence 3333 45533211 1 16799999754322 2234788888999
Q ss_pred ccCceEEEEEec
Q 036911 202 LSGGHVLLSIIG 213 (359)
Q Consensus 202 ~pGG~l~~~~~g 213 (359)
+|||++++....
T Consensus 158 ~pgG~lv~~~~~ 169 (223)
T 3duw_A 158 RPGTVIIGDNVV 169 (223)
T ss_dssp CTTCEEEEESCS
T ss_pred CCCcEEEEeCCC
Confidence 999988876543
No 199
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.66 E-value=4.5e-05 Score=72.06 Aligned_cols=114 Identities=12% Similarity=0.048 Sum_probs=61.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh-hCC-CCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV-KGS-NFGP 126 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~-~~~-~~~~ 126 (359)
+.+.+|+|+|||+|..+..++ +. .+..+++..|+.. +.-.+.+ ..+... .+. ..+-
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~-~~~~~a~------~~~~~~~~~~~~~~v 146 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVL--------KH-------DSVEKAILCEVDG-LVIEAAR------KYLKQTSCGFDDPRA 146 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHT--------TS-------TTCSEEEEEESCH-HHHHHHH------HHCHHHHGGGGCTTE
T ss_pred CCCCEEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECCH-HHHHHHH------HHhHhhccccCCCce
Confidence 456899999999999888775 21 1347888888742 1111110 000000 010 1122
Q ss_pred eEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.++. ++....+ .+++++|+|++...-+|... +..+ ....|++.-++-|+|||
T Consensus 147 ~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~~~~-~~~l-----------------------~~~~~l~~~~~~LkpgG 199 (296)
T 1inl_A 147 EIVI---ANGAEYVRKFKNEFDVIIIDSTDPTAGQ-GGHL-----------------------FTEEFYQACYDALKEDG 199 (296)
T ss_dssp EEEE---SCHHHHGGGCSSCEEEEEEEC-----------C-----------------------CSHHHHHHHHHHEEEEE
T ss_pred EEEE---CcHHHHHhhCCCCceEEEEcCCCcccCc-hhhh-----------------------hHHHHHHHHHHhcCCCc
Confidence 2333 3443221 24678999999765555432 1111 12358888899999999
Q ss_pred eEEEEE
Q 036911 206 HVLLSI 211 (359)
Q Consensus 206 ~l~~~~ 211 (359)
+|++..
T Consensus 200 ~lv~~~ 205 (296)
T 1inl_A 200 VFSAET 205 (296)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999975
No 200
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.61 E-value=0.00012 Score=70.44 Aligned_cols=113 Identities=16% Similarity=0.066 Sum_probs=69.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..++.++... .|...++..|+.. ......+. ..+.. .-
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~--------------~~~~~v~g~Di~~-----------~~i~~a~~n~~~~g~~-~i 256 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL--------------GPTSPVYAGDLDE-----------KRLGLAREAALASGLS-WI 256 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH--------------CTTSCEEEEESCH-----------HHHHHHHHHHHHTTCT-TC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh--------------CCCceEEEEECCH-----------HHHHHHHHHHHHcCCC-ce
Confidence 35799999999999888776322 1347889999742 11121211 12321 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|.. +++.+...+.+++|+++++--.+|...... ........+++.-.+-|+|||+
T Consensus 257 ~~~~---~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~---------------------~~~~~~~~~~~~~~~~LkpgG~ 312 (354)
T 3tma_A 257 RFLR---ADARHLPRFFPEVDRILANPPHGLRLGRKE---------------------GLFHLYWDFLRGALALLPPGGR 312 (354)
T ss_dssp EEEE---CCGGGGGGTCCCCSEEEECCCSCC----CH---------------------HHHHHHHHHHHHHHHTSCTTCE
T ss_pred EEEe---CChhhCccccCCCCEEEECCCCcCccCCcc---------------------cHHHHHHHHHHHHHHhcCCCcE
Confidence 3433 677776777788999999644433110000 0023446788888999999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
+++.+.
T Consensus 313 l~i~t~ 318 (354)
T 3tma_A 313 VALLTL 318 (354)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999863
No 201
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.61 E-value=4.4e-05 Score=67.96 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=62.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|+.+++.+ ++..+|+..|+.. ......++ ..+...+-.
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v~ 119 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLAL--------------PKDGTLITCDVDE-----------KSTALAKEYWEKAGLSDKIG 119 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTC--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHTTCTTTEE
T ss_pred CCEEEEeCCcchHHHHHHHHhC--------------CCCCEEEEEeCCH-----------HHHHHHHHHHHHCCCCCceE
Confidence 5699999999999999887222 2358899999742 11111111 122221223
Q ss_pred EEecccCCcccCC--CCC----CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 128 FIAGIPGSFYGRL--FPN----KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 128 f~~~v~gsFy~~l--fp~----~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
|+. ++..+.+ ++. +++|++++.. | ..+...+|+.-.+-|
T Consensus 120 ~~~---~d~~~~~~~~~~~~~~~~fD~v~~~~---~-----------------------------~~~~~~~l~~~~~~L 164 (225)
T 3tr6_A 120 LRL---SPAKDTLAELIHAGQAWQYDLIYIDA---D-----------------------------KANTDLYYEESLKLL 164 (225)
T ss_dssp EEE---SCHHHHHHHHHTTTCTTCEEEEEECS---C-----------------------------GGGHHHHHHHHHHHE
T ss_pred EEe---CCHHHHHHHhhhccCCCCccEEEECC---C-----------------------------HHHHHHHHHHHHHhc
Confidence 433 3443221 111 7899999532 2 123445888888999
Q ss_pred ccCceEEEEEec
Q 036911 202 LSGGHVLLSIIG 213 (359)
Q Consensus 202 ~pGG~l~~~~~g 213 (359)
+|||++++....
T Consensus 165 ~pgG~lv~~~~~ 176 (225)
T 3tr6_A 165 REGGLIAVDNVL 176 (225)
T ss_dssp EEEEEEEEECSS
T ss_pred CCCcEEEEeCCC
Confidence 999999986553
No 202
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.59 E-value=0.00013 Score=70.21 Aligned_cols=113 Identities=17% Similarity=0.080 Sum_probs=65.2
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh-hCC-CCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV-KGS-NFGP 126 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~-~~~-~~~~ 126 (359)
+.+.+|+|+|||+|..++.++ +. .|..+|+..|+.. +.-.+.+ ..+... .+. ..+-
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la--------~~-------~~~~~V~~VDis~-~~l~~Ar------~~~~~~~~gl~~~rv 176 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVA--------RH-------ASIEQIDMCEIDK-MVVDVSK------QFFPDVAIGYEDPRV 176 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHT--------TC-------TTCCEEEEEESCH-HHHHHHH------HHCHHHHGGGGSTTE
T ss_pred CCCCEEEEECCCccHHHHHHH--------Hc-------CCCCEEEEEECCH-HHHHHHH------HHHHhhccccCCCcE
Confidence 456899999999999888775 21 2447888889742 1111111 001000 011 1122
Q ss_pred eEEecccCCcccC--CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 127 CFIAGIPGSFYGR--LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 127 ~f~~~v~gsFy~~--lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
.++. ++...- -++++++|+|++....+|-. +..+ ....|++.-.+-|+||
T Consensus 177 ~~~~---~D~~~~l~~~~~~~fDlIi~d~~~p~~~--~~~l-----------------------~~~~~l~~~~~~Lkpg 228 (334)
T 1xj5_A 177 NLVI---GDGVAFLKNAAEGSYDAVIVDSSDPIGP--AKEL-----------------------FEKPFFQSVARALRPG 228 (334)
T ss_dssp EEEE---SCHHHHHHTSCTTCEEEEEECCCCTTSG--GGGG-----------------------GSHHHHHHHHHHEEEE
T ss_pred EEEE---CCHHHHHHhccCCCccEEEECCCCccCc--chhh-----------------------hHHHHHHHHHHhcCCC
Confidence 3333 454432 23568999999966543310 1101 1246899999999999
Q ss_pred ceEEEEE
Q 036911 205 GHVLLSI 211 (359)
Q Consensus 205 G~l~~~~ 211 (359)
|+|++..
T Consensus 229 G~lv~~~ 235 (334)
T 1xj5_A 229 GVVCTQA 235 (334)
T ss_dssp EEEEEEC
T ss_pred cEEEEec
Confidence 9999874
No 203
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.59 E-value=4.4e-05 Score=72.61 Aligned_cols=53 Identities=4% Similarity=0.003 Sum_probs=35.1
Q ss_pred CcccCCCCCCceeEEEecccc---cccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEEE
Q 036911 135 SFYGRLFPNKSLHFVHSSYSL---HWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLSI 211 (359)
Q Consensus 135 sFy~~lfp~~S~d~~~S~~al---hWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~~ 211 (359)
++.. +|+.++|+|+|..+. ||..+.+. .+ ..|....+-|+|||.|++.+
T Consensus 140 D~~~--l~~~~fD~V~sd~~~~~g~~~~d~~~-------------------------~l-~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 140 DVFF--IPPERCDTLLCDIGESSPNPTVEAGR-------------------------TL-RVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CTTT--SCCCCCSEEEECCCCCCSSHHHHHHH-------------------------HH-HHHHHHHHHCCTTCEEEEEE
T ss_pred cccc--CCcCCCCEEEECCccccCcchhhHHH-------------------------HH-HHHHHHHHHhCCCCEEEEEe
Confidence 5543 367899999998775 34322110 01 25666679999999999987
Q ss_pred ecCC
Q 036911 212 IGND 215 (359)
Q Consensus 212 ~g~~ 215 (359)
+...
T Consensus 192 ~~~~ 195 (305)
T 2p41_A 192 LNPY 195 (305)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7553
No 204
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.59 E-value=0.00017 Score=67.63 Aligned_cols=110 Identities=11% Similarity=-0.026 Sum_probs=65.2
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC------
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS------ 122 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~------ 122 (359)
+.+.+|+|+|||+|..+..++ +. .|..+++..|+.. ...+..++....
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~-----------~~i~~a~~~~~~~~~~~~ 130 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEIDE-----------TVIEVSKIYFKNISCGYE 130 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESCH-----------HHHHHHHHHCTTTSGGGG
T ss_pred CCCCeEEEEeCCcCHHHHHHH--------Hc-------CCCCEEEEEECCH-----------HHHHHHHHHhHHhccccC
Confidence 456899999999999888765 21 2447888888741 111111111110
Q ss_pred CCCCeEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 123 NFGPCFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
..+-.++. ++..+-+ ..++++|+|++....+|.. +..+.. ..|++.-++-|
T Consensus 131 ~~~v~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l~~-----------------------~~~l~~~~~~L 182 (283)
T 2i7c_A 131 DKRVNVFI---EDASKFLENVTNTYDVIIVDSSDPIGP--AETLFN-----------------------QNFYEKIYNAL 182 (283)
T ss_dssp STTEEEEE---SCHHHHHHHCCSCEEEEEEECCCTTTG--GGGGSS-----------------------HHHHHHHHHHE
T ss_pred CCcEEEEE---CChHHHHHhCCCCceEEEEcCCCCCCc--chhhhH-----------------------HHHHHHHHHhc
Confidence 11222333 3443221 1268899999976655521 111110 35899999999
Q ss_pred ccCceEEEEEe
Q 036911 202 LSGGHVLLSII 212 (359)
Q Consensus 202 ~pGG~l~~~~~ 212 (359)
+|||+|++...
T Consensus 183 ~pgG~lv~~~~ 193 (283)
T 2i7c_A 183 KPNGYCVAQCE 193 (283)
T ss_dssp EEEEEEEEECC
T ss_pred CCCcEEEEECC
Confidence 99999998754
No 205
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.58 E-value=0.00015 Score=69.24 Aligned_cols=109 Identities=11% Similarity=0.045 Sum_probs=61.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC-----C-
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG-----S- 122 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~-----~- 122 (359)
+.+.+|+|+|||+|..+..++ +. .|..+++..|+.. ...+..++... .
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~-----------~~i~~Ar~~~~~~~~~~~ 160 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVL--------KH-------ESVEKVTMCEIDE-----------MVIDVAKKFLPGMSCGFS 160 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHT--------TC-------TTCCEEEEECSCH-----------HHHHHHHHHCTTTSGGGG
T ss_pred CCCCEEEEEcCCcCHHHHHHH--------Hc-------CCCCEEEEEECCH-----------HHHHHHHHHHHHhccccC
Confidence 456899999999999888775 21 2457888889741 11111111110 0
Q ss_pred CCCCeEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 123 NFGPCFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
..+--++ .++..+-+ .+++++|+|++...-||- .+..+.. ..|++.-.+-|
T Consensus 161 ~~rv~~~---~~D~~~~l~~~~~~fD~Ii~d~~~~~~--~~~~l~t-----------------------~~~l~~~~~~L 212 (314)
T 2b2c_A 161 HPKLDLF---CGDGFEFLKNHKNEFDVIITDSSDPVG--PAESLFG-----------------------QSYYELLRDAL 212 (314)
T ss_dssp CTTEEEE---CSCHHHHHHHCTTCEEEEEECCC--------------------------------------HHHHHHHHE
T ss_pred CCCEEEE---EChHHHHHHhcCCCceEEEEcCCCCCC--cchhhhH-----------------------HHHHHHHHhhc
Confidence 1111233 34543322 257899999997654441 0111100 24898989999
Q ss_pred ccCceEEEEE
Q 036911 202 LSGGHVLLSI 211 (359)
Q Consensus 202 ~pGG~l~~~~ 211 (359)
+|||++++..
T Consensus 213 kpgG~lv~~~ 222 (314)
T 2b2c_A 213 KEDGILSSQG 222 (314)
T ss_dssp EEEEEEEEEC
T ss_pred CCCeEEEEEC
Confidence 9999999876
No 206
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.57 E-value=0.00011 Score=68.38 Aligned_cols=112 Identities=11% Similarity=-0.008 Sum_probs=61.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|..+++. .+|+..|+... - ...+..+ .. ....+. +-.|+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~------------------~~V~gvD~s~m-~-~~a~~~~-~~---~~~~~~--~v~~~ 127 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR------------------PHVMDVRAYTL-G-VGGHEVP-RI---TESYGW--NIVKF 127 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS------------------TTEEEEEEECC-C-CSSCCCC-CC---CCBTTG--GGEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc------------------CcEEEEECchh-h-hhhhhhh-hh---hhccCC--CeEEE
Confidence 3579999999999998877611 45666666321 0 0000000 00 000000 12333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc--eE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG--HV 207 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG--~l 207 (359)
.. .+++.. +|++++|+|+|..+ +.... | ..+ +..-..+|....+-|+||| .+
T Consensus 128 ~~-~~D~~~--l~~~~fD~V~sd~~-~~~~~-~--~~d-------------------~~~~l~~L~~~~r~LkpGG~~~f 181 (265)
T 2oxt_A 128 KS-RVDIHT--LPVERTDVIMCDVG-ESSPK-W--SVE-------------------SERTIKILELLEKWKVKNPSADF 181 (265)
T ss_dssp EC-SCCTTT--SCCCCCSEEEECCC-CCCSC-H--HHH-------------------HHHHHHHHHHHHHHHHHCTTCEE
T ss_pred ec-ccCHhH--CCCCCCcEEEEeCc-ccCCc-c--chh-------------------HHHHHHHHHHHHHHhccCCCeEE
Confidence 11 356654 56889999999877 54221 1 000 0000126677778999999 99
Q ss_pred EEEEec
Q 036911 208 LLSIIG 213 (359)
Q Consensus 208 ~~~~~g 213 (359)
++..+.
T Consensus 182 v~kv~~ 187 (265)
T 2oxt_A 182 VVKVLC 187 (265)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 998877
No 207
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.57 E-value=0.00019 Score=68.56 Aligned_cols=110 Identities=11% Similarity=-0.045 Sum_probs=64.8
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCC------
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGS------ 122 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~------ 122 (359)
+.+.+|+|+|||+|..+..++ +. .|..+++..|+.. ...+..++....
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDis~-----------~~l~~ar~~~~~~~~~~~ 168 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEIDE-----------TVIEVSKIYFKNISCGYE 168 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHT--------TC-------TTCCEEEEEESCH-----------HHHHHHHHHCTTTSGGGG
T ss_pred CCCCEEEEEcCCccHHHHHHH--------Hc-------CCCCEEEEEECCH-----------HHHHHHHHHHHhhccccC
Confidence 456899999999999888775 21 2457888888742 111111111110
Q ss_pred CCCCeEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 123 NFGPCFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 123 ~~~~~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
..+-.++. ++..+-+ .+++++|+|++...-+|- .+..+. -..|++.-.+-|
T Consensus 169 ~~~v~~~~---~D~~~~l~~~~~~fDvIi~d~~~p~~--~~~~l~-----------------------~~~~l~~~~~~L 220 (321)
T 2pt6_A 169 DKRVNVFI---EDASKFLENVTNTYDVIIVDSSDPIG--PAETLF-----------------------NQNFYEKIYNAL 220 (321)
T ss_dssp STTEEEEE---SCHHHHHHHCCSCEEEEEEECCCSSS--GGGGGS-----------------------SHHHHHHHHHHE
T ss_pred CCcEEEEE---ccHHHHHhhcCCCceEEEECCcCCCC--cchhhh-----------------------HHHHHHHHHHhc
Confidence 11222333 4443322 246889999997544431 000000 046898889999
Q ss_pred ccCceEEEEEe
Q 036911 202 LSGGHVLLSII 212 (359)
Q Consensus 202 ~pGG~l~~~~~ 212 (359)
+|||++++...
T Consensus 221 kpgG~lv~~~~ 231 (321)
T 2pt6_A 221 KPNGYCVAQCE 231 (321)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEcC
Confidence 99999999864
No 208
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.56 E-value=0.00028 Score=65.82 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=65.6
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH-hhCC-CCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE-VKGS-NFGP 126 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~-~~~~-~~~~ 126 (359)
+++.+|+|+|||+|..+..++ ++ .+..+++..|+-. +.-.+.+. .+.. ..+. ..+-
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vEid~-~~v~~ar~------~~~~~~~~~~~~rv 131 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREIL--------KH-------PSVKKATLVDIDG-KVIEYSKK------FLPSIAGKLDDPRV 131 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHT--------TC-------TTCSEEEEEESCH-HHHHHHHH------HCHHHHTTTTSTTE
T ss_pred CCCCEEEEECCchHHHHHHHH--------hC-------CCCceEEEEECCH-HHHHHHHH------HhHhhccccCCCce
Confidence 457899999999999887765 21 2346888888741 11111110 0000 0011 1122
Q ss_pred eEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.++. ++...-+ .+++++|+|++....+|.. +..+.. ..|++.-.+-|+|||
T Consensus 132 ~v~~---~D~~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l~~-----------------------~~~~~~~~~~L~pgG 183 (275)
T 1iy9_A 132 DVQV---DDGFMHIAKSENQYDVIMVDSTEPVGP--AVNLFT-----------------------KGFYAGIAKALKEDG 183 (275)
T ss_dssp EEEE---SCSHHHHHTCCSCEEEEEESCSSCCSC--CCCCST-----------------------THHHHHHHHHEEEEE
T ss_pred EEEE---CcHHHHHhhCCCCeeEEEECCCCCCCc--chhhhH-----------------------HHHHHHHHHhcCCCc
Confidence 3333 4443221 2468999999976666521 221111 248888899999999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
++++...
T Consensus 184 ~lv~~~~ 190 (275)
T 1iy9_A 184 IFVAQTD 190 (275)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999853
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.55 E-value=0.00016 Score=67.62 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=63.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhh----C---
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVK----G--- 121 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~----~--- 121 (359)
+.+.+|+|+|||+|..+..++ + . +..+++..|+.. ...+..++.. +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~--------~-------~-~~~~v~~vDid~-----------~~i~~ar~~~~~~~~l~~ 126 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVL--------Q-------H-DVDEVIMVEIDE-----------DVIMVSKDLIKIDNGLLE 126 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHT--------T-------S-CCSEEEEEESCH-----------HHHHHHHHHTCTTTTHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHH--------h-------C-CCCEEEEEECCH-----------HHHHHHHHHHhhcccccc
Confidence 456899999999999888765 1 1 336788888741 1111111111 0
Q ss_pred -----CCCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHH
Q 036911 122 -----SNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTS 196 (359)
Q Consensus 122 -----~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~ 196 (359)
...+-.++. ++..+-+..++++|+|++....+|-. +..+. -..|++.
T Consensus 127 ~~~~~~~~~v~~~~---~D~~~~l~~~~~fD~Ii~d~~~~~~~--~~~l~-----------------------~~~~l~~ 178 (281)
T 1mjf_A 127 AMLNGKHEKAKLTI---GDGFEFIKNNRGFDVIIADSTDPVGP--AKVLF-----------------------SEEFYRY 178 (281)
T ss_dssp HHHTTCCSSEEEEE---SCHHHHHHHCCCEEEEEEECCCCC-------TT-----------------------SHHHHHH
T ss_pred ccccCCCCcEEEEE---CchHHHhcccCCeeEEEECCCCCCCc--chhhh-----------------------HHHHHHH
Confidence 111222333 34322111167899999976655521 11110 1358888
Q ss_pred HHHhhccCceEEEEEec
Q 036911 197 RSEEILSGGHVLLSIIG 213 (359)
Q Consensus 197 Ra~EL~pGG~l~~~~~g 213 (359)
-++-|+|||++++....
T Consensus 179 ~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 179 VYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHHHEEEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEcCC
Confidence 89999999999998644
No 210
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.53 E-value=0.00018 Score=68.46 Aligned_cols=125 Identities=14% Similarity=-0.022 Sum_probs=67.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|..+++.+ .+..+|+.+|+.. .....++. ..+. .++
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~--------------~~~~~v~avD~s~-----------~~l~~a~~~~~~~g~--~~v 171 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLM--------------RNDGVIYAFDVDE-----------NRLRETRLNLSRLGV--LNV 171 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHT--------------TTCSEEEEECSCH-----------HHHHHHHHHHHHHTC--CSE
T ss_pred CCEEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEcCCH-----------HHHHHHHHHHHHhCC--CeE
Confidence 5799999999999999887432 2347899999742 11111211 1222 122
Q ss_pred EEecccCCcccCCCCCCceeEEEec---ccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSS---YSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~---~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
..+.+++.....+++++|.|++. +.+.-+.+.|..... |+...+ ..-.+....+|+.-.+-|+||
T Consensus 172 --~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~-----~~~~~~-----~~~~~~q~~~L~~~~~~LkpG 239 (315)
T 1ixk_A 172 --ILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWN-----RTMDDI-----KFCQGLQMRLLEKGLEVLKPG 239 (315)
T ss_dssp --EEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC-------------CCHHHH-----HHHHHHHHHHHHHHHHHEEEE
T ss_pred --EEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhc-----CCHHHH-----HHHHHHHHHHHHHHHHhCCCC
Confidence 22335665443356789999983 122212222321100 000000 000222357888889999999
Q ss_pred ceEEEEEecC
Q 036911 205 GHVLLSIIGN 214 (359)
Q Consensus 205 G~l~~~~~g~ 214 (359)
|+|++++...
T Consensus 240 G~lv~stcs~ 249 (315)
T 1ixk_A 240 GILVYSTCSL 249 (315)
T ss_dssp EEEEEEESCC
T ss_pred CEEEEEeCCC
Confidence 9999987544
No 211
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.52 E-value=7.8e-05 Score=69.91 Aligned_cols=112 Identities=13% Similarity=-0.058 Sum_probs=61.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|..+++. .+|+..|+..- - ...+.-+ .. ....+. +-.|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~------------------~~V~gVD~s~m-~-~~a~~~~-~~---~~~~~~--~v~~~ 135 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ------------------PNVREVKAYTL-G-TSGHEKP-RL---VETFGW--NLITF 135 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS------------------TTEEEEEEECC-C-CTTSCCC-CC---CCCTTG--GGEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHc------------------CCEEEEECchh-h-hhhhhch-hh---hhhcCC--CeEEE
Confidence 3579999999999998877611 45666676421 0 0000000 00 000000 12333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc--eE
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG--HV 207 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG--~l 207 (359)
.. .+++.. +|++++|+|+|..+ ++... | ..+ +..-..+|+...+-|+||| .+
T Consensus 136 ~~-~~D~~~--l~~~~fD~Vvsd~~-~~~~~-~--~~d-------------------~~~~l~~L~~~~r~LkpGG~~~~ 189 (276)
T 2wa2_A 136 KS-KVDVTK--MEPFQADTVLCDIG-ESNPT-A--AVE-------------------ASRTLTVLNVISRWLEYNQGCGF 189 (276)
T ss_dssp EC-SCCGGG--CCCCCCSEEEECCC-CCCSC-H--HHH-------------------HHHHHHHHHHHHHHHHHSTTCEE
T ss_pred ec-cCcHhh--CCCCCcCEEEECCC-cCCCc-h--hhh-------------------HHHHHHHHHHHHHHhccCCCcEE
Confidence 10 356655 56889999999877 55221 1 000 0000125677778999999 99
Q ss_pred EEEEec
Q 036911 208 LLSIIG 213 (359)
Q Consensus 208 ~~~~~g 213 (359)
++..+.
T Consensus 190 v~~~~~ 195 (276)
T 2wa2_A 190 CVKVLN 195 (276)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 998877
No 212
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.51 E-value=6.6e-05 Score=68.89 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=62.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
++.+|+|+|||+|..|+.+++.+ ++..+++..|+.. ......++ ..+...+-
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~--------------~~~~~v~~iD~s~-----------~~~~~a~~~~~~~g~~~~i 133 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAI--------------PEDGKILAMDINK-----------ENYELGLPVIKKAGVDHKI 133 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHS--------------CTTCEEEEEESCC-----------HHHHHHHHHHHHTTCGGGE
T ss_pred CcCEEEEeCCCcCHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCCe
Confidence 35799999999999999887432 2357899999742 11111111 12211111
Q ss_pred eEEecccCCcccCC--C-----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 127 CFIAGIPGSFYGRL--F-----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--f-----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
.++. |+..+.+ + +++++|++++... ..+...+|+.-.+
T Consensus 134 ~~~~---gda~~~l~~l~~~~~~~~~fD~V~~d~~--------------------------------~~~~~~~l~~~~~ 178 (247)
T 1sui_A 134 DFRE---GPALPVLDEMIKDEKNHGSYDFIFVDAD--------------------------------KDNYLNYHKRLID 178 (247)
T ss_dssp EEEE---SCHHHHHHHHHHSGGGTTCBSEEEECSC--------------------------------STTHHHHHHHHHH
T ss_pred EEEE---CCHHHHHHHHHhccCCCCCEEEEEEcCc--------------------------------hHHHHHHHHHHHH
Confidence 2333 4443321 1 2688999998421 0123458888889
Q ss_pred hhccCceEEEEE
Q 036911 200 EILSGGHVLLSI 211 (359)
Q Consensus 200 EL~pGG~l~~~~ 211 (359)
-|+|||++++..
T Consensus 179 ~LkpGG~lv~d~ 190 (247)
T 1sui_A 179 LVKVGGVIGYDN 190 (247)
T ss_dssp HBCTTCCEEEEC
T ss_pred hCCCCeEEEEec
Confidence 999999999864
No 213
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.48 E-value=0.00012 Score=66.51 Aligned_cols=103 Identities=17% Similarity=0.101 Sum_probs=62.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
++.+|+|+|||+|..|+.+++.+ ++..+++..|+.. ......++ ..+...+-
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~--------------~~~~~v~~iD~~~-----------~~~~~a~~~~~~~g~~~~i 124 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI--------------PDDGKITAIDFDR-----------EAYEIGLPFIRKAGVEHKI 124 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHTTCGGGE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcE
Confidence 45799999999999999887432 2357888888731 11111111 12221112
Q ss_pred eEEecccCCcccCC--C-----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHH
Q 036911 127 CFIAGIPGSFYGRL--F-----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSE 199 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--f-----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~ 199 (359)
.++. |+..+.+ + +++++|++++.. | ..++..||+.-.+
T Consensus 125 ~~~~---gda~~~l~~l~~~~~~~~~fD~I~~d~---~-----------------------------~~~~~~~l~~~~~ 169 (237)
T 3c3y_A 125 NFIE---SDAMLALDNLLQGQESEGSYDFGFVDA---D-----------------------------KPNYIKYHERLMK 169 (237)
T ss_dssp EEEE---SCHHHHHHHHHHSTTCTTCEEEEEECS---C-----------------------------GGGHHHHHHHHHH
T ss_pred EEEE---cCHHHHHHHHHhccCCCCCcCEEEECC---c-----------------------------hHHHHHHHHHHHH
Confidence 2333 3443321 1 367899999742 2 1234468888889
Q ss_pred hhccCceEEEEEe
Q 036911 200 EILSGGHVLLSII 212 (359)
Q Consensus 200 EL~pGG~l~~~~~ 212 (359)
-|+|||++++...
T Consensus 170 ~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 170 LVKVGGIVAYDNT 182 (237)
T ss_dssp HEEEEEEEEEECT
T ss_pred hcCCCeEEEEecC
Confidence 9999999988654
No 214
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.45 E-value=0.00031 Score=63.13 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=60.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+++. ..+++..|+.. ......++ ..+...+-
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~-----------------~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~~ 142 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV-----------------AGEVWTFEAVE-----------EFYKTAQKNLKKFNLGKNV 142 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-----------------SSEEEEECSCH-----------HHHHHHHHHHHHTTCCTTE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-----------------CCEEEEEecCH-----------HHHHHHHHHHHHcCCCCcE
Confidence 3579999999999998877622 15788888642 11111111 11211111
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.+ +.+++.+.+++++++|+++++ .|. .. .+|+.-.+-|+|||+
T Consensus 143 ~~---~~~d~~~~~~~~~~~D~v~~~--------~~~-~~-------------------------~~l~~~~~~L~~gG~ 185 (248)
T 2yvl_A 143 KF---FNVDFKDAEVPEGIFHAAFVD--------VRE-PW-------------------------HYLEKVHKSLMEGAP 185 (248)
T ss_dssp EE---ECSCTTTSCCCTTCBSEEEEC--------SSC-GG-------------------------GGHHHHHHHBCTTCE
T ss_pred EE---EEcChhhcccCCCcccEEEEC--------CcC-HH-------------------------HHHHHHHHHcCCCCE
Confidence 22 335666544477899999983 121 11 256677889999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
+++...
T Consensus 186 l~~~~~ 191 (248)
T 2yvl_A 186 VGFLLP 191 (248)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999884
No 215
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.45 E-value=3.4e-05 Score=68.25 Aligned_cols=101 Identities=10% Similarity=-0.054 Sum_probs=60.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
+.+|+|+|||+|..|+.+++.+ ++..+|+..|+.. ......++ ..+...+-.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v~ 111 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAI--------------SISSRVVMIDPDR-----------DNVEHARRMLHDNGLIDRVE 111 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTS--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHHSGGGGEE
T ss_pred CCEEEEEcCCccHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHCCCCceEE
Confidence 5799999999999998876221 2247888888741 11111111 112110112
Q ss_pred EEecccCCcccC-CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 128 FIAGIPGSFYGR-LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 128 f~~~v~gsFy~~-lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
++. ++..+. ...++ +|++++... ..+...+|+.-.+-|+|||+
T Consensus 112 ~~~---~d~~~~~~~~~~-fD~v~~~~~--------------------------------~~~~~~~l~~~~~~LkpgG~ 155 (210)
T 3c3p_A 112 LQV---GDPLGIAAGQRD-IDILFMDCD--------------------------------VFNGADVLERMNRCLAKNAL 155 (210)
T ss_dssp EEE---SCHHHHHTTCCS-EEEEEEETT--------------------------------TSCHHHHHHHHGGGEEEEEE
T ss_pred EEE---ecHHHHhccCCC-CCEEEEcCC--------------------------------hhhhHHHHHHHHHhcCCCeE
Confidence 333 455432 22346 999998521 11344588888899999999
Q ss_pred EEEEEe
Q 036911 207 VLLSII 212 (359)
Q Consensus 207 l~~~~~ 212 (359)
+++...
T Consensus 156 lv~~~~ 161 (210)
T 3c3p_A 156 LIAVNA 161 (210)
T ss_dssp EEEESS
T ss_pred EEEECc
Confidence 988544
No 216
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.44 E-value=0.00053 Score=62.64 Aligned_cols=127 Identities=14% Similarity=0.146 Sum_probs=79.5
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+...+|+|+|||||..++.++ +. .|..+|+..|+.. ......+. ..+.. .
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~AvDi~~-----------~al~~A~~N~~~~gl~-~ 72 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLL--------QM-------GYCDFAIAGEVVN-----------GPYQSALKNVSEHGLT-S 72 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHH--------HT-------TCEEEEEEEESSH-----------HHHHHHHHHHHHTTCT-T
T ss_pred CCCCEEEEECCchHHHHHHHH--------Hh-------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCC-C
Confidence 345799999999999999887 22 2446899999842 12122221 12321 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.+- ...|+.++.+.|...+|+++++-. | ..-...+|....+-|+++|
T Consensus 73 ~I~--~~~gD~l~~~~~~~~~D~IviaGm---------------------G----------g~lI~~IL~~~~~~l~~~~ 119 (230)
T 3lec_A 73 KID--VRLANGLSAFEEADNIDTITICGM---------------------G----------GRLIADILNNDIDKLQHVK 119 (230)
T ss_dssp TEE--EEECSGGGGCCGGGCCCEEEEEEE---------------------C----------HHHHHHHHHHTGGGGTTCC
T ss_pred cEE--EEECchhhccccccccCEEEEeCC---------------------c----------hHHHHHHHHHHHHHhCcCC
Confidence 122 234677776666557998875211 0 1123457777777789999
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcCCceEEeEEEEE
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTEGSFNIRRFDIH 280 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~Gsf~i~~~e~~ 280 (359)
+|+++-. . ..++++.++.+.| |.|..-...
T Consensus 120 ~lIlqp~---~-----------------------------------------~~~~lr~~L~~~G-f~i~~E~lv 149 (230)
T 3lec_A 120 TLVLQPN---N-----------------------------------------REDDLRKWLAAND-FEIVAEDIL 149 (230)
T ss_dssp EEEEEES---S-----------------------------------------CHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEEECC---C-----------------------------------------ChHHHHHHHHHCC-CEEEEEEEE
Confidence 9887762 1 1457888888888 888776643
No 217
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.40 E-value=0.001 Score=60.47 Aligned_cols=104 Identities=11% Similarity=0.101 Sum_probs=61.0
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+...+|+|+|||||..++.++ +. .|..+|+..|+.. ......+. ..+...+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~~-----------~al~~A~~N~~~~gl~~~ 67 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELV--------ER-------GQIKSAIAGEVVE-----------GPYQSAVKNVEAHGLKEK 67 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESSH-----------HHHHHHHHHHHHTTCTTT
T ss_pred CCCCEEEEeCCCcHHHHHHHH--------Hh-------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCce
Confidence 345799999999999999887 22 2557899999742 11121221 1222111
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
-.+ ..|+.++.+-+...+|.++.+-. | ..-...+|..-.+-|+|||
T Consensus 68 i~~---~~~d~l~~l~~~~~~D~IviaG~---------------------G----------g~~i~~Il~~~~~~L~~~~ 113 (225)
T 3kr9_A 68 IQV---RLANGLAAFEETDQVSVITIAGM---------------------G----------GRLIARILEEGLGKLANVE 113 (225)
T ss_dssp EEE---EECSGGGGCCGGGCCCEEEEEEE---------------------C----------HHHHHHHHHHTGGGCTTCC
T ss_pred EEE---EECchhhhcccCcCCCEEEEcCC---------------------C----------hHHHHHHHHHHHHHhCCCC
Confidence 122 23455554433336887775211 0 1123458888788899999
Q ss_pred eEEEEEe
Q 036911 206 HVLLSII 212 (359)
Q Consensus 206 ~l~~~~~ 212 (359)
+|+++-.
T Consensus 114 ~lVlq~~ 120 (225)
T 3kr9_A 114 RLILQPN 120 (225)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9988653
No 218
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.38 E-value=0.00037 Score=69.07 Aligned_cols=127 Identities=16% Similarity=0.114 Sum_probs=71.2
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..|..+++.. +..+|+.+|....=... ....+. ..+. ...++.
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~---------------~~~~v~a~D~~~~~l~~-------~~~~~~-~~g~--~~~~~~ 301 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVA---------------PEAQVVAVDIDEQRLSR-------VYDNLK-RLGM--KATVKQ 301 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHC---------------TTCEEEEEESSTTTHHH-------HHHHHH-HTTC--CCEEEE
T ss_pred cCeEEEECCCchHHHHHHHHHc---------------CCCEEEEECCCHHHHHH-------HHHHHH-HcCC--CeEEEe
Confidence 4699999999999999887332 23789999985421111 111111 1222 223333
Q ss_pred cccCCcccCC--CCCCceeEEEe---cccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 131 GIPGSFYGRL--FPNKSLHFVHS---SYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 131 ~v~gsFy~~l--fp~~S~d~~~S---~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
+++.... ++++++|+|++ ++....+.+.|..... ++...+ ..-.+....+|+.-.+-|+|||
T Consensus 302 ---~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~-----~~~~~~-----~~l~~~q~~~L~~a~~~LkpGG 368 (429)
T 1sqg_A 302 ---GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL-----RRDRDI-----PELAQLQSEILDAIWPHLKTGG 368 (429)
T ss_dssp ---CCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH-----CCTTHH-----HHHHHHHHHHHHHHGGGEEEEE
T ss_pred ---CchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhc-----CCHHHH-----HHHHHHHHHHHHHHHHhcCCCC
Confidence 4554332 56689999997 3444444444431110 000000 0001122578888889999999
Q ss_pred eEEEEEecCC
Q 036911 206 HVLLSIIGND 215 (359)
Q Consensus 206 ~l~~~~~g~~ 215 (359)
+|++++....
T Consensus 369 ~lvystcs~~ 378 (429)
T 1sqg_A 369 TLVYATCSVL 378 (429)
T ss_dssp EEEEEESCCC
T ss_pred EEEEEECCCC
Confidence 9999886543
No 219
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.38 E-value=0.00063 Score=63.14 Aligned_cols=103 Identities=17% Similarity=0.010 Sum_probs=64.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+.+++.. +..+|+..|+.. .....++. .++.. +.
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~---------------~~~~V~~vD~s~-----------~av~~a~~n~~~n~l~-~~ 171 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS---------------KPKLVYAIEKNP-----------TAYHYLCENIKLNKLN-NV 171 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT---------------CCSEEEEEECCH-----------HHHHHHHHHHHHTTCS-SE
T ss_pred CCCEEEEecCcCCHHHHHHHHhC---------------CCCEEEEEeCCH-----------HHHHHHHHHHHHcCCC-CE
Confidence 45799999999999999887332 236899999741 12122221 12221 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+. |+..+. ...+++|++++.. |.... .+|..-.+.|+|||+
T Consensus 172 ~~~~---~d~~~~-~~~~~~D~Vi~d~--------p~~~~-------------------------~~l~~~~~~LkpgG~ 214 (272)
T 3a27_A 172 IPIL---ADNRDV-ELKDVADRVIMGY--------VHKTH-------------------------KFLDKTFEFLKDRGV 214 (272)
T ss_dssp EEEE---SCGGGC-CCTTCEEEEEECC--------CSSGG-------------------------GGHHHHHHHEEEEEE
T ss_pred EEEE---CChHHc-CccCCceEEEECC--------cccHH-------------------------HHHHHHHHHcCCCCE
Confidence 3444 455443 1257899998852 22111 266666789999999
Q ss_pred EEEEEecCCC
Q 036911 207 VLLSIIGNDR 216 (359)
Q Consensus 207 l~~~~~g~~~ 216 (359)
++++.....+
T Consensus 215 l~~s~~~~~~ 224 (272)
T 3a27_A 215 IHYHETVAEK 224 (272)
T ss_dssp EEEEEEEEGG
T ss_pred EEEEEcCccc
Confidence 9999886644
No 220
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.36 E-value=0.00043 Score=64.60 Aligned_cols=130 Identities=10% Similarity=0.056 Sum_probs=77.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~ 125 (359)
+.+.+|+|||||+|+.++.++ ...|..+++..|.-. ...+..+.. .|. +
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~---------------~~~p~a~y~a~DId~-----------~~le~a~~~l~~~g~--~ 182 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWM---------------GLPAETVYIASDIDA-----------RLVGFVDEALTRLNV--P 182 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTT---------------TCCTTCEEEEEESBH-----------HHHHHHHHHHHHTTC--C
T ss_pred CCCceeeeeccCccHHHHHHH---------------hhCCCCEEEEEeCCH-----------HHHHHHHHHHHhcCC--C
Confidence 457899999999999999776 123678999999731 121222211 222 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
..+.. .++-... |+...|++.++-++|-|.+-..... | .--+.|+|||
T Consensus 183 ~~~~v---~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g--------------------------~--~ll~aL~~~~ 230 (281)
T 3lcv_B 183 HRTNV---ADLLEDR-LDEPADVTLLLKTLPCLETQQRGSG--------------------------W--EVIDIVNSPN 230 (281)
T ss_dssp EEEEE---CCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHH--------------------------H--HHHHHSSCSE
T ss_pred ceEEE---eeecccC-CCCCcchHHHHHHHHHhhhhhhHHH--------------------------H--HHHHHhCCCC
Confidence 12211 3554444 7788999999999999977443111 2 3356788877
Q ss_pred eEEEEEecCCCCCCCCchhHHHHHHHHHHHHHH-hcc
Q 036911 206 HVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVL-EGL 241 (359)
Q Consensus 206 ~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~-eGl 241 (359)
.+ +++.-+.= .+++..+.+.-.+.|...+. .|.
T Consensus 231 vv-VSfp~ksl--~Grs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 231 IV-VTFPTKSL--GQRSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp EE-EEEECC---------CHHHHHHHHHHHHHHHHTC
T ss_pred EE-Eeccchhh--cCCCcchhhHHHHHHHHHHHhcCC
Confidence 65 67765433 33335566677777766554 554
No 221
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.35 E-value=0.00028 Score=65.10 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=52.7
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHh---hCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~ 125 (359)
+.+.+|+|+|||+|+.++..+ +...++..|+.. ...+.++.. .+. +
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~------------------~~~~y~a~DId~-----------~~i~~ar~~~~~~g~--~ 152 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER------------------GIASVWGCDIHQ-----------GLGDVITPFAREKDW--D 152 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT------------------TCSEEEEEESBH-----------HHHHHHHHHHHHTTC--E
T ss_pred CCCCeEEEecCCccHHHHHhc------------------cCCeEEEEeCCH-----------HHHHHHHHHHHhcCC--C
Confidence 457899999999999888664 458899999742 122222221 121 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCC
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPE 163 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~ 163 (359)
-.|.. +++...+ |+.++|++.++-++|-|.+...
T Consensus 153 ~~~~v---~D~~~~~-~~~~~DvvLllk~lh~LE~q~~ 186 (253)
T 3frh_A 153 FTFAL---QDVLCAP-PAEAGDLALIFKLLPLLEREQA 186 (253)
T ss_dssp EEEEE---CCTTTSC-CCCBCSEEEEESCHHHHHHHST
T ss_pred ceEEE---eecccCC-CCCCcchHHHHHHHHHhhhhch
Confidence 12222 3665555 5569999999999999987665
No 222
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.35 E-value=0.0002 Score=66.48 Aligned_cols=123 Identities=10% Similarity=-0.044 Sum_probs=67.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|..+++.. +...+|+.+|+.. .....++. ..+. .++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~--------------~~~~~v~avD~~~-----------~~l~~~~~~~~~~g~--~~v 136 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLM--------------KNKGTIVAVEISK-----------TRTKALKSNINRMGV--LNT 136 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHT--------------TTCSEEEEEESCH-----------HHHHHHHHHHHHTTC--CSE
T ss_pred cCEEEEeCCCccHHHHHHHHHc--------------CCCCEEEEECCCH-----------HHHHHHHHHHHHhCC--CcE
Confidence 5699999999999999887332 1237899999742 11111211 1222 122
Q ss_pred EEecccCCcccCCC----CCCceeEEEec---ccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHh
Q 036911 128 FIAGIPGSFYGRLF----PNKSLHFVHSS---YSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEE 200 (359)
Q Consensus 128 f~~~v~gsFy~~lf----p~~S~d~~~S~---~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~E 200 (359)
- .+.+++..... +++++|+|++. +.+..+.+.| .|+...+ ..-..+...+|+.-.+-
T Consensus 137 ~--~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p---------~~~~~~~-----~~~~~~~~~~l~~~~~~ 200 (274)
T 3ajd_A 137 I--IINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNR---------NVSEEDI-----KYCSLRQKELIDIGIDL 200 (274)
T ss_dssp E--EEESCHHHHHHHHHHTTCCEEEEEEEECCC---------------------HHHH-----TGGGTCHHHHHHHHHHH
T ss_pred E--EEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCC---------CCCHHHH-----HHHHHHHHHHHHHHHHh
Confidence 1 22345544333 36789999984 2222222222 0111100 00134567889888999
Q ss_pred hccCceEEEEEecCCC
Q 036911 201 ILSGGHVLLSIIGNDR 216 (359)
Q Consensus 201 L~pGG~l~~~~~g~~~ 216 (359)
|+|||+|++++.....
T Consensus 201 LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 201 LKKDGELVYSTCSMEV 216 (274)
T ss_dssp EEEEEEEEEEESCCCT
T ss_pred CCCCCEEEEEECCCCh
Confidence 9999999998865533
No 223
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.28 E-value=0.00061 Score=62.80 Aligned_cols=103 Identities=11% Similarity=0.105 Sum_probs=63.0
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
+...+|+|+|||+|..++.++ +. .|..+|+..|+.. ......+. ..+.. .
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~~-----------~al~~A~~N~~~~gl~-~ 72 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAV--------KN-------QTASFAIAGEVVD-----------GPFQSAQKQVRSSGLT-E 72 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESSH-----------HHHHHHHHHHHHTTCT-T
T ss_pred CCCCEEEEECCccHHHHHHHH--------Hh-------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCC-c
Confidence 345799999999999999887 22 2446899999842 11122221 12321 1
Q ss_pred CeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 126 PCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 126 ~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.+ ....|+.++.+.|..++|+++++-. | ..-...+|....+-|+++|
T Consensus 73 ~I--~v~~gD~l~~~~~~~~~D~Iviagm---------------------G----------g~lI~~IL~~~~~~L~~~~ 119 (244)
T 3gnl_A 73 QI--DVRKGNGLAVIEKKDAIDTIVIAGM---------------------G----------GTLIRTILEEGAAKLAGVT 119 (244)
T ss_dssp TE--EEEECSGGGGCCGGGCCCEEEEEEE---------------------C----------HHHHHHHHHHTGGGGTTCC
T ss_pred eE--EEEecchhhccCccccccEEEEeCC---------------------c----------hHHHHHHHHHHHHHhCCCC
Confidence 12 2234676776666556999886211 0 1123457777778889999
Q ss_pred eEEEEE
Q 036911 206 HVLLSI 211 (359)
Q Consensus 206 ~l~~~~ 211 (359)
+|+++-
T Consensus 120 ~lIlq~ 125 (244)
T 3gnl_A 120 KLILQP 125 (244)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 998875
No 224
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.26 E-value=0.0007 Score=68.29 Aligned_cols=104 Identities=12% Similarity=0.130 Sum_probs=59.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..++.++ +. +..+|+..|+. . ..... .... ...+...+-.|+
T Consensus 159 ~~~VLDiGcGtG~la~~la--------~~--------~~~~V~gvD~s--~---~l~~A---~~~~-~~~gl~~~v~~~- 212 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAS--T---MAQHA---EVLV-KSNNLTDRIVVI- 212 (480)
T ss_dssp TCEEEEESCSTTHHHHHHH--------HT--------TCSEEEEEECH--H---HHHHH---HHHH-HHTTCTTTEEEE-
T ss_pred CCEEEEecCcccHHHHHHH--------Hc--------CCCEEEEEEcH--H---HHHHH---HHHH-HHcCCCCcEEEE-
Confidence 5799999999999887664 21 33689988973 1 10100 0111 112221122333
Q ss_pred cccCCcccCCCCCCceeEEEeccccc-ccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLH-WLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLL 209 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alh-Wls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~ 209 (359)
.+++.+..+| +++|+++|+..++ |... +....|..-.+-|+|||+|++
T Consensus 213 --~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e----------------------------~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 213 --PGKVEEVSLP-EQVDIIISEPMGYMLFNE----------------------------RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp --ESCTTTCCCS-SCEEEEECCCCHHHHTCH----------------------------HHHHHHHHGGGGEEEEEEEES
T ss_pred --ECchhhCccC-CCeEEEEEeCchHhcCcH----------------------------HHHHHHHHHHHhcCCCCEEEE
Confidence 3676654444 6899999976643 4211 112234444589999999985
Q ss_pred EE
Q 036911 210 SI 211 (359)
Q Consensus 210 ~~ 211 (359)
..
T Consensus 262 ~~ 263 (480)
T 3b3j_A 262 TI 263 (480)
T ss_dssp CE
T ss_pred Ee
Confidence 44
No 225
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.26 E-value=0.00014 Score=64.92 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=61.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+.+++.+ ++..+++..|+.. ......++ ..+...+-
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~-----------~~~~~a~~~~~~~g~~~~i 123 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALAL--------------PADGRVVTCEVDA-----------QPPELGRPLWRQAEAEHKI 123 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESCS-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEEcCCccHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHCCCCCeE
Confidence 35799999999999998876221 2247888889742 11111111 12221122
Q ss_pred eEEecccCCcccCC--CC-C---CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHh
Q 036911 127 CFIAGIPGSFYGRL--FP-N---KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEE 200 (359)
Q Consensus 127 ~f~~~v~gsFy~~l--fp-~---~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~E 200 (359)
.++. +++.+.+ ++ . +++|++++... ..++..+++.-.+-
T Consensus 124 ~~~~---~d~~~~~~~~~~~~~~~~~D~v~~d~~--------------------------------~~~~~~~l~~~~~~ 168 (229)
T 2avd_A 124 DLRL---KPALETLDELLAAGEAGTFDVAVVDAD--------------------------------KENCSAYYERCLQL 168 (229)
T ss_dssp EEEE---SCHHHHHHHHHHTTCTTCEEEEEECSC--------------------------------STTHHHHHHHHHHH
T ss_pred EEEE---cCHHHHHHHHHhcCCCCCccEEEECCC--------------------------------HHHHHHHHHHHHHH
Confidence 3333 4443221 11 1 78999998432 12344578888899
Q ss_pred hccCceEEEEEe
Q 036911 201 ILSGGHVLLSII 212 (359)
Q Consensus 201 L~pGG~l~~~~~ 212 (359)
|+|||++++...
T Consensus 169 L~pgG~lv~~~~ 180 (229)
T 2avd_A 169 LRPGGILAVLRV 180 (229)
T ss_dssp EEEEEEEEEECC
T ss_pred cCCCeEEEEECC
Confidence 999999998654
No 226
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.26 E-value=0.00015 Score=65.48 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=61.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
+.+|+|+|||+|..|+.+++.+ ++..+++..|+.. ......++ ..+....-.
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~iD~~~-----------~~~~~a~~~~~~~g~~~~i~ 127 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQL--------------PPDGQIIACDQDP-----------NATAIAKKYWQKAGVAEKIS 127 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESCH-----------HHHHHHHHHHHHHTCGGGEE
T ss_pred CCEEEEecCCCCHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcEE
Confidence 5699999999999998887221 2246888888741 11111111 112211112
Q ss_pred EEecccCCccc---CC-CCC--CceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhh
Q 036911 128 FIAGIPGSFYG---RL-FPN--KSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEI 201 (359)
Q Consensus 128 f~~~v~gsFy~---~l-fp~--~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL 201 (359)
++. ++..+ .+ +.+ +++|++++... ..++..+|+.-.+-|
T Consensus 128 ~~~---~d~~~~l~~l~~~~~~~~fD~V~~d~~--------------------------------~~~~~~~l~~~~~~L 172 (232)
T 3cbg_A 128 LRL---GPALATLEQLTQGKPLPEFDLIFIDAD--------------------------------KRNYPRYYEIGLNLL 172 (232)
T ss_dssp EEE---SCHHHHHHHHHTSSSCCCEEEEEECSC--------------------------------GGGHHHHHHHHHHTE
T ss_pred EEE---cCHHHHHHHHHhcCCCCCcCEEEECCC--------------------------------HHHHHHHHHHHHHHc
Confidence 333 44432 11 223 78999997532 113445888888999
Q ss_pred ccCceEEEEEecC
Q 036911 202 LSGGHVLLSIIGN 214 (359)
Q Consensus 202 ~pGG~l~~~~~g~ 214 (359)
+|||++++.....
T Consensus 173 kpgG~lv~~~~~~ 185 (232)
T 3cbg_A 173 RRGGLMVIDNVLW 185 (232)
T ss_dssp EEEEEEEEECTTG
T ss_pred CCCeEEEEeCCCc
Confidence 9999999865433
No 227
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.25 E-value=0.00066 Score=63.56 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=25.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
..+|+|+|||+|..++.+.. . |..+|+..|+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~--------~--------~~~~v~~vDis 155 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAK--------F--------SDAIVFATDVS 155 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHH--------H--------SSCEEEEEESC
T ss_pred CCEEEEEeCchhHHHHHHHH--------C--------CCCEEEEEECC
Confidence 46999999999999887761 1 34789999974
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.23 E-value=0.0036 Score=54.48 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=44.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..+..+. +. +..+++..|+.. ......+.... +-.|+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~~--------~~~~v~~vD~~~-----------~~~~~a~~~~~---~~~~~ 100 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------LL--------GAESVTAFDIDP-----------DAIETAKRNCG---GVNFM 100 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------HT--------TBSEEEEEESCH-----------HHHHHHHHHCT---TSEEE
T ss_pred CCCEEEEEeCCccHHHHHHH--------Hc--------CCCEEEEEECCH-----------HHHHHHHHhcC---CCEEE
Confidence 45799999999999888765 21 224688888731 12222222111 22343
Q ss_pred ecccCCcccCCCCCCceeEEEeccccccccc
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQ 160 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~ 160 (359)
. +++.. +| +++|+++++-.+||+++
T Consensus 101 ~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 101 V---ADVSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp E---CCGGG--CC-CCEEEEEECCCC-----
T ss_pred E---CcHHH--CC-CCeeEEEECCCchhccC
Confidence 3 56654 24 79999999999999765
No 229
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.21 E-value=0.0011 Score=66.17 Aligned_cols=125 Identities=16% Similarity=0.066 Sum_probs=69.2
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|..+++.+ +...+|+.+|+... ....++. ..|. .++
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~--------------~~~~~v~a~D~s~~-----------~l~~~~~~~~~~g~--~~v 312 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELM--------------KNKGKIYAFDVDKM-----------RMKRLKDFVKRMGI--KIV 312 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------------TTCSEEEEECSCHH-----------HHHHHHHHHHHTTC--CSE
T ss_pred cCEEEEeCCCccHHHHHHHHHc--------------CCCCEEEEEcCCHH-----------HHHHHHHHHHHcCC--CcE
Confidence 4699999999999999887332 12378999997521 1111211 1222 222
Q ss_pred EEecccCCcccCC--CCCCceeEEEe---cccccccccCCCCccccCCCCCCCcceeecCCCCcccc-HHHHHHHHHHhh
Q 036911 128 FIAGIPGSFYGRL--FPNKSLHFVHS---SYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRD-FTLFLTSRSEEI 201 (359)
Q Consensus 128 f~~~v~gsFy~~l--fp~~S~d~~~S---~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d-~~~fL~~Ra~EL 201 (359)
- .+.+++.... ++++++|.|++ ++.+.-+.+.|..... ++...+ ....+ -..+|+.-.+-|
T Consensus 313 ~--~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~-----~~~~~~------~~l~~~q~~iL~~a~~~L 379 (450)
T 2yxl_A 313 K--PLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWR-----LREDKI------NEMSQLQRELLESAARLV 379 (450)
T ss_dssp E--EECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH-----CCTTSH------HHHHHHHHHHHHHHHTTE
T ss_pred E--EEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhh-----CCHHHH------HHHHHHHHHHHHHHHHhc
Confidence 2 2334554333 55588999997 3333333333331110 000000 00011 156788888899
Q ss_pred ccCceEEEEEecCC
Q 036911 202 LSGGHVLLSIIGND 215 (359)
Q Consensus 202 ~pGG~l~~~~~g~~ 215 (359)
+|||+|+++.....
T Consensus 380 kpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 380 KPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEEEEEEEESCCC
T ss_pred CCCcEEEEEeCCCC
Confidence 99999999886554
No 230
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.19 E-value=0.00072 Score=68.19 Aligned_cols=126 Identities=10% Similarity=0.038 Sum_probs=70.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|..+++.+ .+..+|+.+|+... ....++. ..|.. +-.
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~--------------~~~g~V~avDis~~-----------~l~~~~~n~~r~g~~-nv~ 171 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARM--------------NNEGAILANEFSAS-----------RVKVLHANISRCGIS-NVA 171 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHT--------------TTCSEEEEECSSHH-----------HHHHHHHHHHHHTCC-SEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEECCHH-----------HHHHHHHHHHHcCCC-cEE
Confidence 5799999999999999887432 23478999997421 1111211 12321 112
Q ss_pred EEecccCCcccCCC-CCCceeEEEe---cccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 128 FIAGIPGSFYGRLF-PNKSLHFVHS---SYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 128 f~~~v~gsFy~~lf-p~~S~d~~~S---~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
++. ++...... +++++|.|++ ++...-+.+.|..... |....+. .-...-..+|..-.+-|+|
T Consensus 172 ~~~---~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~-----~~~~~~~-----~l~~~q~~iL~~a~~~Lkp 238 (479)
T 2frx_A 172 LTH---FDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKN-----WSPESNQ-----EIAATQRELIDSAFHALRP 238 (479)
T ss_dssp EEC---CCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS-----CCHHHHH-----HHHHHHHHHHHHHHHHEEE
T ss_pred EEe---CCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhh-----cCHhHHH-----HHHHHHHHHHHHHHHhcCC
Confidence 333 44433222 4678999998 3444444444432110 0000000 0011224678777889999
Q ss_pred CceEEEEEecCC
Q 036911 204 GGHVLLSIIGND 215 (359)
Q Consensus 204 GG~l~~~~~g~~ 215 (359)
||+|+.++....
T Consensus 239 GG~LvysTcs~~ 250 (479)
T 2frx_A 239 GGTLVYSTCTLN 250 (479)
T ss_dssp EEEEEEEESCCS
T ss_pred CCEEEEecccCC
Confidence 999999886543
No 231
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.19 E-value=0.00049 Score=66.04 Aligned_cols=116 Identities=16% Similarity=0.060 Sum_probs=66.6
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCC-CC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNF-GP 126 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~-~~ 126 (359)
..+|+|+|||+|..++.++. . ..+|+..|+.. ......+. ..+... +-
T Consensus 154 ~~~VLDlgcGtG~~sl~la~--------~---------ga~V~~VD~s~-----------~al~~a~~n~~~~gl~~~~v 205 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAA--------A---------GAEVTHVDASK-----------KAIGWAKENQVLAGLEQAPI 205 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------T---------TCEEEEECSCH-----------HHHHHHHHHHHHHTCTTSCE
T ss_pred CCcEEEcccccCHHHHHHHH--------c---------CCEEEEEECCH-----------HHHHHHHHHHHHcCCCccce
Confidence 47999999999999988762 1 14889999742 11111111 122211 12
Q ss_pred eEEecccCCcccCCC----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 127 CFIAGIPGSFYGRLF----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.|+. ++....+. ..+++|+|++. |+..... .++.++ ...+++..+|+.-.+-|+
T Consensus 206 ~~i~---~D~~~~l~~~~~~~~~fD~Ii~d---------PP~~~~~-----~~~~~~-----~~~~~~~~ll~~~~~~Lk 263 (332)
T 2igt_A 206 RWIC---EDAMKFIQREERRGSTYDIILTD---------PPKFGRG-----THGEVW-----QLFDHLPLMLDICREILS 263 (332)
T ss_dssp EEEC---SCHHHHHHHHHHHTCCBSEEEEC---------CCSEEEC-----TTCCEE-----EHHHHHHHHHHHHHHTBC
T ss_pred EEEE---CcHHHHHHHHHhcCCCceEEEEC---------CccccCC-----chHHHH-----HHHHHHHHHHHHHHHhcC
Confidence 3433 45544322 15789999983 2211100 001111 114567789988889999
Q ss_pred cCceEEEEEecCCC
Q 036911 203 SGGHVLLSIIGNDR 216 (359)
Q Consensus 203 pGG~l~~~~~g~~~ 216 (359)
|||+++++......
T Consensus 264 pgG~lli~~~~~~~ 277 (332)
T 2igt_A 264 PKALGLVLTAYSIR 277 (332)
T ss_dssp TTCCEEEEEECCTT
T ss_pred cCcEEEEEECCCCC
Confidence 99998888765543
No 232
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.10 E-value=0.0004 Score=69.84 Aligned_cols=119 Identities=16% Similarity=0.065 Sum_probs=68.6
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|..+++.+ +...+|+.+|+.. .....++. ..|. .-.
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~--------------~~~g~V~AvDis~-----------~~l~~a~~n~~r~G~--~v~ 154 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARM--------------GGKGLLLANEVDG-----------KRVRGLLENVERWGA--PLA 154 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------------TTCSEEEEECSCH-----------HHHHHHHHHHHHHCC--CCE
T ss_pred CCEEEEEcCCcCHHHHHHHHhC--------------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCC--eEE
Confidence 5799999999999999887433 2236899999742 11111211 1232 122
Q ss_pred EEecccCCcccCC-CCCCceeEEEe---cccccccccCCCCccccCCCCCCCcceeecCCCCc-----cccHHHHHHHHH
Q 036911 128 FIAGIPGSFYGRL-FPNKSLHFVHS---SYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPV-----GRDFTLFLTSRS 198 (359)
Q Consensus 128 f~~~v~gsFy~~l-fp~~S~d~~~S---~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~-----~~d~~~fL~~Ra 198 (359)
++ -++..... +.++++|.|++ ++..--+.+.|..... .++. .+.-..+|..-.
T Consensus 155 ~~---~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~---------------~~~~~~~~l~~~Q~~iL~~a~ 216 (464)
T 3m6w_A 155 VT---QAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARH---------------WGPSAPKRMAEVQKALLAQAS 216 (464)
T ss_dssp EE---CSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGG---------------CCTTHHHHHHHHHHHHHHHHH
T ss_pred EE---ECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhh---------------cCHHHHHHHHHHHHHHHHHHH
Confidence 33 34544322 24689999996 2222222233321110 0111 222267888888
Q ss_pred HhhccCceEEEEEecC
Q 036911 199 EEILSGGHVLLSIIGN 214 (359)
Q Consensus 199 ~EL~pGG~l~~~~~g~ 214 (359)
+-|+|||+|+.++...
T Consensus 217 ~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 217 RLLGPGGVLVYSTCTF 232 (464)
T ss_dssp TTEEEEEEEEEEESCC
T ss_pred HhcCCCcEEEEEeccC
Confidence 8999999999987654
No 233
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.08 E-value=0.0018 Score=60.05 Aligned_cols=100 Identities=10% Similarity=-0.023 Sum_probs=57.8
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhc-ccchHHHHHHhhCCCCCCe
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKS-LPGFYEKLKEVKGSNFGPC 127 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~-l~~~~~~~~~~~~~~~~~~ 127 (359)
+++.+|+|+|||+|..+..++ + . + .+++..|+-. +.-.+.+. ++.....+ ...+-.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll--------~-------~-~-~~v~~veid~-~~i~~ar~~~~~~~~~~-----~~~rv~ 127 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLF--------K-------Y-D-THIDFVQADE-KILDSFISFFPHFHEVK-----NNKNFT 127 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHT--------T-------S-S-CEEEEECSCH-HHHGGGTTTSTTHHHHH-----TCTTEE
T ss_pred CCCCEEEEEeCCcCHHHHHHH--------h-------C-C-CEEEEEECCH-HHHHHHHHHHHhhcccc-----CCCeEE
Confidence 456899999999998877665 1 1 4 6788888742 11111111 11100000 011223
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
++. ++..+-+ +++|+|++..+ + |. .|++.-.+-|+|||+|
T Consensus 128 ~~~---~D~~~~~---~~fD~Ii~d~~-----d-p~----------------------------~~~~~~~~~L~pgG~l 167 (262)
T 2cmg_A 128 HAK---QLLDLDI---KKYDLIFCLQE-----P-DI----------------------------HRIDGLKRMLKEDGVF 167 (262)
T ss_dssp EES---SGGGSCC---CCEEEEEESSC-----C-CH----------------------------HHHHHHHTTEEEEEEE
T ss_pred EEe---chHHHHH---hhCCEEEECCC-----C-hH----------------------------HHHHHHHHhcCCCcEE
Confidence 333 3433322 88999998521 1 11 2888889999999999
Q ss_pred EEEE
Q 036911 208 LLSI 211 (359)
Q Consensus 208 ~~~~ 211 (359)
++..
T Consensus 168 v~~~ 171 (262)
T 2cmg_A 168 ISVA 171 (262)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9875
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.01 E-value=0.00037 Score=65.27 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=48.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC---CCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG---SNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~---~~~~~ 126 (359)
...+|+|+|||+|..|..+++.. .+|+..|+.. .....++.... ...+-
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~-----------------~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~v 79 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKA-----------------KKVVACELDP-----------RLVAELHKRVQGTPVASKL 79 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHS-----------------SEEEEEESCH-----------HHHHHHHHHHTTSTTGGGE
T ss_pred CCCEEEEEcCcccHHHHHHHhhC-----------------CEEEEEECCH-----------HHHHHHHHHHHhcCCCCce
Confidence 35799999999999999887321 4677778631 12222222111 10011
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccC
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQV 161 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~ 161 (359)
.+ +.+++....+| ++|.++++...||.+.+
T Consensus 80 ~~---~~~D~~~~~~~--~fD~vv~nlpy~~~~~~ 109 (285)
T 1zq9_A 80 QV---LVGDVLKTDLP--FFDTCVANLPYQISSPF 109 (285)
T ss_dssp EE---EESCTTTSCCC--CCSEEEEECCGGGHHHH
T ss_pred EE---EEcceecccch--hhcEEEEecCcccchHH
Confidence 23 33677654444 79999999998886543
No 235
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.96 E-value=0.017 Score=50.27 Aligned_cols=78 Identities=18% Similarity=0.098 Sum_probs=45.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhC-CCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG-SNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~-~~~~~~f 128 (359)
...+|+|+|||+|..+..+. +. .+ .+++..|+.. ......+.... ...+-.+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~--------~~-------~~-~~v~~vD~~~-----------~~~~~a~~~~~~~~~~~~~ 101 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGAL--------LL-------GA-KEVICVEVDK-----------EAVDVLIENLGEFKGKFKV 101 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT-------TC-SEEEEEESCH-----------HHHHHHHHHTGGGTTSEEE
T ss_pred CcCEEEEeeCCCCHHHHHHH--------Hc-------CC-CEEEEEECCH-----------HHHHHHHHHHHHcCCCEEE
Confidence 35799999999999888775 21 12 4688888731 11111221110 0001223
Q ss_pred EecccCCcccCCCCCCceeEEEeccccccccc
Q 036911 129 IAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQ 160 (359)
Q Consensus 129 ~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~ 160 (359)
+ .+++.. +| +++|+++++-.+|+.++
T Consensus 102 ~---~~d~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 102 F---IGDVSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp E---ESCGGG--CC-CCCSEEEECCCCSSSST
T ss_pred E---ECchHH--cC-CCCCEEEEcCCCccccC
Confidence 3 356655 23 58999999888887653
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.96 E-value=0.0035 Score=59.96 Aligned_cols=125 Identities=8% Similarity=0.034 Sum_probs=71.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..+..+.+.+ .+.. ....+++..|+-. . .....+. ..+. ..
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~----~~~~------~~~~~v~GiDi~~--~---------~~~~a~~n~~~~g~--~~ 186 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQL----ELKG------DVDVHASGVDVDD--L---------LISLALVGADLQRQ--KM 186 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHH----HTTS------SCEEEEEEEESCH--H---------HHHHHHHHHHHHTC--CC
T ss_pred CCCEEEeCCCCccHHHHHHHHHH----HHhc------CCCceEEEEECCH--H---------HHHHHHHHHHhCCC--Cc
Confidence 46899999999999888777544 1100 1237889889731 1 1111111 1122 22
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHH-HHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFT-LFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~-~fL~~Ra~EL~pGG 205 (359)
.++ .|++.. ..+..++|+|+++--+++...-. .. ..+.. .......+.. .|+..-.+-|+|||
T Consensus 187 ~i~---~~D~l~-~~~~~~fD~Ii~NPPfg~~~~~~---~~---~~~~~------~~~~g~~~~~~~~l~~~~~~Lk~gG 250 (344)
T 2f8l_A 187 TLL---HQDGLA-NLLVDPVDVVISDLPVGYYPDDE---NA---KTFEL------CREEGHSFAHFLFIEQGMRYTKPGG 250 (344)
T ss_dssp EEE---ESCTTS-CCCCCCEEEEEEECCCSEESCHH---HH---TTSTT------CCSSSCEEHHHHHHHHHHHTEEEEE
T ss_pred eEE---ECCCCC-ccccCCccEEEECCCCCCcCchh---hh---hhccc------cCCCCcchHHHHHHHHHHHHhCCCC
Confidence 233 345544 33568899999987776643210 00 00000 0111233443 58888889999999
Q ss_pred eEEEEEec
Q 036911 206 HVLLSIIG 213 (359)
Q Consensus 206 ~l~~~~~g 213 (359)
++++++..
T Consensus 251 ~~~~v~p~ 258 (344)
T 2f8l_A 251 YLFFLVPD 258 (344)
T ss_dssp EEEEEEEG
T ss_pred EEEEEECc
Confidence 99999853
No 237
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.82 E-value=0.00062 Score=64.42 Aligned_cols=80 Identities=13% Similarity=0.023 Sum_probs=51.4
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
...+|+|+|||+|..|..+++. ..+|+..|+-. .+...+++..... +++-
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~-----------------~~~V~aVEid~-----------~li~~a~~~~~~~-~~v~- 99 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN-----------------AKKVYVIEIDK-----------SLEPYANKLKELY-NNIE- 99 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-----------------SSEEEEEESCG-----------GGHHHHHHHHHHC-SSEE-
T ss_pred CcCEEEEECCCchHHHHHHHhc-----------------CCEEEEEECCH-----------HHHHHHHHHhccC-CCeE-
Confidence 3569999999999999988732 15677777642 2222222211000 1221
Q ss_pred ecccCCcccCCCCCCceeEEEeccccccccc
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQ 160 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhWls~ 160 (359)
.+.|++....+++.++|.++++...||-+.
T Consensus 100 -vi~gD~l~~~~~~~~fD~Iv~NlPy~is~p 129 (295)
T 3gru_A 100 -IIWGDALKVDLNKLDFNKVVANLPYQISSP 129 (295)
T ss_dssp -EEESCTTTSCGGGSCCSEEEEECCGGGHHH
T ss_pred -EEECchhhCCcccCCccEEEEeCcccccHH
Confidence 234688777788888999999988888543
No 238
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.82 E-value=0.0096 Score=55.76 Aligned_cols=102 Identities=8% Similarity=-0.087 Sum_probs=60.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|+.|+.++ .+ ...+|+.+|+-. .....++. .++.. ..+
T Consensus 126 g~~VlD~~aG~G~~~i~~a--------~~--------g~~~V~avD~np-----------~a~~~~~~N~~~N~v~-~~v 177 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA--------VY--------GKAKVIAIEKDP-----------YTFKFLVENIHLNKVE-DRM 177 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH--------HH--------TCCEEEEECCCH-----------HHHHHHHHHHHHTTCT-TTE
T ss_pred CCEEEEecCcCcHHHHHHH--------Hh--------cCCeEEEEECCH-----------HHHHHHHHHHHHcCCC-CcE
Confidence 5799999999999999776 22 126799999831 11121221 12222 222
Q ss_pred EEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceE
Q 036911 128 FIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHV 207 (359)
Q Consensus 128 f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l 207 (359)
-+ +.++... +.+.+.+|.|+.. .|.... .||..--+-|+|||.+
T Consensus 178 ~~--~~~D~~~-~~~~~~~D~Vi~~--------~p~~~~-------------------------~~l~~a~~~lk~gG~i 221 (278)
T 3k6r_A 178 SA--YNMDNRD-FPGENIADRILMG--------YVVRTH-------------------------EFIPKALSIAKDGAII 221 (278)
T ss_dssp EE--ECSCTTT-CCCCSCEEEEEEC--------CCSSGG-------------------------GGHHHHHHHEEEEEEE
T ss_pred EE--EeCcHHH-hccccCCCEEEEC--------CCCcHH-------------------------HHHHHHHHHcCCCCEE
Confidence 22 2355532 3456789988763 233211 1565556779999999
Q ss_pred EEEEecCCC
Q 036911 208 LLSIIGNDR 216 (359)
Q Consensus 208 ~~~~~g~~~ 216 (359)
.+-.+...+
T Consensus 222 h~~~~~~e~ 230 (278)
T 3k6r_A 222 HYHNTVPEK 230 (278)
T ss_dssp EEEEEEEGG
T ss_pred EEEeeeccc
Confidence 887665543
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.82 E-value=0.0019 Score=62.89 Aligned_cols=113 Identities=13% Similarity=0.111 Sum_probs=66.5
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+.+++. ..+|+..|+.. ...+..+. .++.. +-
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-----------------~~~v~~vD~s~-----------~~~~~a~~n~~~n~~~-~~ 259 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-----------------FREVVAVDSSA-----------EALRRAEENARLNGLG-NV 259 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-----------------EEEEEEEESCH-----------HHHHHHHHHHHHTTCT-TE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-----------------CCEEEEEECCH-----------HHHHHHHHHHHHcCCC-Cc
Confidence 3579999999999999888622 15788888741 11111211 12221 12
Q ss_pred eEEecccCCcccCCC----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 127 CFIAGIPGSFYGRLF----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.|+. ++..+.+. .+.++|+|++ +.|..... +..+ ....+++..++..-.+-|+
T Consensus 260 ~~~~---~d~~~~~~~~~~~~~~fD~Ii~--------dpP~~~~~-------~~~~-----~~~~~~~~~~l~~~~~~Lk 316 (382)
T 1wxx_A 260 RVLE---ANAFDLLRRLEKEGERFDLVVL--------DPPAFAKG-------KKDV-----ERAYRAYKEVNLRAIKLLK 316 (382)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEE--------CCCCSCCS-------TTSH-----HHHHHHHHHHHHHHHHTEE
T ss_pred eEEE---CCHHHHHHHHHhcCCCeeEEEE--------CCCCCCCC-------hhHH-----HHHHHHHHHHHHHHHHhcC
Confidence 3333 45544322 2578999997 33321110 0000 0114677889999999999
Q ss_pred cCceEEEEEecC
Q 036911 203 SGGHVLLSIIGN 214 (359)
Q Consensus 203 pGG~l~~~~~g~ 214 (359)
|||.|+++....
T Consensus 317 pgG~l~~~~~~~ 328 (382)
T 1wxx_A 317 EGGILATASCSH 328 (382)
T ss_dssp EEEEEEEEECCT
T ss_pred CCCEEEEEECCC
Confidence 999999887543
No 240
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.79 E-value=7.3e-05 Score=68.24 Aligned_cols=20 Identities=25% Similarity=0.315 Sum_probs=17.9
Q ss_pred CcceEEeecCCCCcchHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~ 69 (359)
...+|+|+|||+|..|..+.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~ 48 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLA 48 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHH
Confidence 45799999999999999887
No 241
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.71 E-value=0.0023 Score=62.16 Aligned_cols=97 Identities=13% Similarity=0.036 Sum_probs=56.2
Q ss_pred HHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCC
Q 036911 18 YANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDL 97 (359)
Q Consensus 18 Y~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDL 97 (359)
|...+.++..++..+..+. . +...+|+|+|||+|..++.++... +..+++..|+
T Consensus 196 ~~~~a~l~~~la~~l~~~~-~----------~~~~~vLD~gCGsG~~~i~~a~~~---------------~~~~v~g~Di 249 (373)
T 3tm4_A 196 YDHPAHLKASIANAMIELA-E----------LDGGSVLDPMCGSGTILIELALRR---------------YSGEIIGIEK 249 (373)
T ss_dssp SCCTTCCCHHHHHHHHHHH-T----------CCSCCEEETTCTTCHHHHHHHHTT---------------CCSCEEEEES
T ss_pred ccCCCCccHHHHHHHHHhh-c----------CCCCEEEEccCcCcHHHHHHHHhC---------------CCCeEEEEeC
Confidence 4445555555555544332 1 345799999999999888776211 2247888887
Q ss_pred CCCchhhhhhcccchHHHHHH---hhCCCCCCeEEecccCCcccCCCCCCceeEEEeccc
Q 036911 98 PGNDFNTIFKSLPGFYEKLKE---VKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYS 154 (359)
Q Consensus 98 p~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~a 154 (359)
.. ......+. ..+....-.|.. +++.+..++++++|+++++--
T Consensus 250 s~-----------~~l~~A~~n~~~~gl~~~i~~~~---~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 250 YR-----------KHLIGAEMNALAAGVLDKIKFIQ---GDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CH-----------HHHHHHHHHHHHTTCGGGCEEEE---CCGGGGGGTCSCEEEEEEECC
T ss_pred CH-----------HHHHHHHHHHHHcCCCCceEEEE---CChhhCCcccCCcCEEEECCC
Confidence 42 11111111 122211223433 678777778899999999543
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.71 E-value=0.005 Score=58.86 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=60.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+. ++ ...+|+..|+.. .....++. .++...+-
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-----------------~~~~V~~vD~s~-----------~ai~~a~~n~~~n~l~~~v 245 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-----------------NAKKIYAIDINP-----------HAIELLKKNIKLNKLEHKI 245 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-----------------TSSEEEEEESCH-----------HHHHHHHHHHHHTTCTTTE
T ss_pred CCCEEEEccCccCHHHHh-cc-----------------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCCCcE
Confidence 357999999999999886 51 137899999741 11121221 12221122
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
.|+. ++....+ +++|++++. .|.... .|+..-.+-|+|||+
T Consensus 246 ~~~~---~D~~~~~---~~fD~Vi~d--------pP~~~~-------------------------~~l~~~~~~L~~gG~ 286 (336)
T 2yx1_A 246 IPIL---SDVREVD---VKGNRVIMN--------LPKFAH-------------------------KFIDKALDIVEEGGV 286 (336)
T ss_dssp EEEE---SCGGGCC---CCEEEEEEC--------CTTTGG-------------------------GGHHHHHHHEEEEEE
T ss_pred EEEE---CChHHhc---CCCcEEEEC--------CcHhHH-------------------------HHHHHHHHHcCCCCE
Confidence 3443 5655444 889999973 232111 267777788999999
Q ss_pred EEEEEecCC
Q 036911 207 VLLSIIGND 215 (359)
Q Consensus 207 l~~~~~g~~ 215 (359)
+++..+...
T Consensus 287 l~~~~~~~~ 295 (336)
T 2yx1_A 287 IHYYTIGKD 295 (336)
T ss_dssp EEEEEEESS
T ss_pred EEEEEeecC
Confidence 999887664
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.67 E-value=0.0058 Score=59.47 Aligned_cols=120 Identities=10% Similarity=0.105 Sum_probs=65.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
..+|+|+|||+|..++.+++.. .+..+++..|+-..=. . . . .+..+
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~--------------~~~~~i~gvDi~~~~~-------~-~---a-------~~~~~-- 85 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAH--------------GTAYRFVGVEIDPKAL-------D-L---P-------PWAEG-- 85 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHH--------------CSCSEEEEEESCTTTC-------C-C---C-------TTEEE--
T ss_pred CCEEEECCCCChHHHHHHHHHh--------------CCCCeEEEEECCHHHH-------H-h---C-------CCCcE--
Confidence 4699999999999888776432 1347888888742200 0 0 0 01112
Q ss_pred cccCCcccCCCCCCceeEEEeccccccccc-------CCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhcc
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQ-------VPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILS 203 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~-------~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~p 203 (359)
+.+++.. ..+++++|+|+++=-...... ++....+. +. .. ..........+..|+..-.+-|+|
T Consensus 86 -~~~D~~~-~~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~----~~--~~-~~~~~~~~~~~~~fl~~~~~~Lk~ 156 (421)
T 2ih2_A 86 -ILADFLL-WEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDL----YK--KA-FSTWKGKYNLYGAFLEKAVRLLKP 156 (421)
T ss_dssp -EESCGGG-CCCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHH----HH--HH-CTTCCTTCCHHHHHHHHHHHHEEE
T ss_pred -EeCChhh-cCccCCCCEEEECcCccCcccccccccccCHHHHHH----HH--Hh-hhcccCCccHHHHHHHHHHHHhCC
Confidence 2356654 335679999999521111111 11100000 00 00 000001123455789888899999
Q ss_pred CceEEEEEec
Q 036911 204 GGHVLLSIIG 213 (359)
Q Consensus 204 GG~l~~~~~g 213 (359)
||++++.+..
T Consensus 157 ~G~~~~i~p~ 166 (421)
T 2ih2_A 157 GGVLVFVVPA 166 (421)
T ss_dssp EEEEEEEEEG
T ss_pred CCEEEEEECh
Confidence 9999999874
No 244
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.65 E-value=0.0049 Score=60.48 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=64.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|+.++. . . ..|+..|+.. ...+..+. .++.. ..
T Consensus 215 g~~VLDlg~GtG~~sl~~a~--------~-------g--a~V~avDis~-----------~al~~a~~n~~~ng~~--~~ 264 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAAR--------K-------G--AYALAVDKDL-----------EALGVLDQAALRLGLR--VD 264 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHH--------T-------T--CEEEEEESCH-----------HHHHHHHHHHHHHTCC--CE
T ss_pred CCeEEEcccchhHHHHHHHH--------c-------C--CeEEEEECCH-----------HHHHHHHHHHHHhCCC--Cc
Confidence 57999999999999998762 1 1 3388899852 11121211 12321 22
Q ss_pred EEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 128 FIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 128 f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
+.. ++..+.+ ..++.+|+|++. |+.... ++..+ ....+++..++..-.+-|+|||+
T Consensus 265 ~~~---~D~~~~l~~~~~~fD~Ii~d---------pP~f~~------~~~~~-----~~~~~~~~~ll~~a~~~LkpGG~ 321 (393)
T 4dmg_A 265 IRH---GEALPTLRGLEGPFHHVLLD---------PPTLVK------RPEEL-----PAMKRHLVDLVREALRLLAEEGF 321 (393)
T ss_dssp EEE---SCHHHHHHTCCCCEEEEEEC---------CCCCCS------SGGGH-----HHHHHHHHHHHHHHHHTEEEEEE
T ss_pred EEE---ccHHHHHHHhcCCCCEEEEC---------CCcCCC------CHHHH-----HHHHHHHHHHHHHHHHhcCCCCE
Confidence 333 4544322 113449999973 321111 00000 01156788899888999999999
Q ss_pred EEEEEecC
Q 036911 207 VLLSIIGN 214 (359)
Q Consensus 207 l~~~~~g~ 214 (359)
|++.....
T Consensus 322 Lv~~s~s~ 329 (393)
T 4dmg_A 322 LWLSSCSY 329 (393)
T ss_dssp EEEEECCT
T ss_pred EEEEECCC
Confidence 99766543
No 245
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.63 E-value=0.0059 Score=59.16 Aligned_cols=102 Identities=10% Similarity=0.025 Sum_probs=63.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+| |+|..++.+. .. .|..+|+..|+.. ......++ ..+.. +
T Consensus 173 ~~~VLDlG-G~G~~~~~la--------~~-------~~~~~v~~vDi~~-----------~~l~~a~~~~~~~g~~--~- 222 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALM--------LS-------GLPKRIAVLDIDE-----------RLTKFIEKAANEIGYE--D- 222 (373)
T ss_dssp TCEEEEES-CTTCHHHHHH--------HH-------TCCSEEEEECSCH-----------HHHHHHHHHHHHHTCC--C-
T ss_pred CCEEEEEC-CCCHHHHHHH--------Hh-------CCCCEEEEEECCH-----------HHHHHHHHHHHHcCCC--C-
Confidence 57999999 9999988775 22 1347899999841 11111111 12321 2
Q ss_pred EEecccCCcccCC-C-CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 128 FIAGIPGSFYGRL-F-PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 128 f~~~v~gsFy~~l-f-p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
+..+.+++...+ . +++++|+|+++.-+++. +...||+.-.+-|+|||
T Consensus 223 -v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~------------------------------~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 223 -IEIFTFDLRKPLPDYALHKFDTFITDPPETLE------------------------------AIRAFVGRGIATLKGPR 271 (373)
T ss_dssp -EEEECCCTTSCCCTTTSSCBSEEEECCCSSHH------------------------------HHHHHHHHHHHTBCSTT
T ss_pred -EEEEEChhhhhchhhccCCccEEEECCCCchH------------------------------HHHHHHHHHHHHcccCC
Confidence 223446776522 1 34699999997554442 12458988899999999
Q ss_pred eE-EEEEec
Q 036911 206 HV-LLSIIG 213 (359)
Q Consensus 206 ~l-~~~~~g 213 (359)
++ ++++..
T Consensus 272 ~~~~~~~~~ 280 (373)
T 2qm3_A 272 CAGYFGITR 280 (373)
T ss_dssp CEEEEEECT
T ss_pred eEEEEEEec
Confidence 65 666543
No 246
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.57 E-value=0.0011 Score=66.48 Aligned_cols=124 Identities=12% Similarity=0.017 Sum_probs=66.8
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCCe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGPC 127 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~~ 127 (359)
..+|+|+|||+|..|..+++.+ ....+|+.+|+... ....++. ..|. .++
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~--------------~~~g~V~AvDis~~-----------rl~~~~~n~~r~g~--~nv 158 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQM--------------KGKGLLVTNEIFPK-----------RAKILSENIERWGV--SNA 158 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH--------------TTCSEEEEECSSHH-----------HHHHHHHHHHHHTC--SSE
T ss_pred CCEEEEECCCcCHHHHHHHHHc--------------CCCCEEEEEeCCHH-----------HHHHHHHHHHHcCC--Cce
Confidence 5799999999999999887544 13478999998421 1111211 1232 222
Q ss_pred EEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCc-----cccHHHHHHHHHHhh
Q 036911 128 FIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPV-----GRDFTLFLTSRSEEI 201 (359)
Q Consensus 128 f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~-----~~d~~~fL~~Ra~EL 201 (359)
-+ +.++..... ..++++|.|++ +.|+.-... ..-+....+. .++. ...-..+|..-.+-|
T Consensus 159 ~v--~~~Da~~l~~~~~~~FD~Il~--------DaPCSg~G~--~rr~p~~~~~--~~~~~~~~l~~~Q~~iL~~a~~~L 224 (456)
T 3m4x_A 159 IV--TNHAPAELVPHFSGFFDRIVV--------DAPCSGEGM--FRKDPNAIKE--WTEESPLYCQKRQQEILSSAIKML 224 (456)
T ss_dssp EE--ECCCHHHHHHHHTTCEEEEEE--------ECCCCCGGG--TTTCHHHHHH--CCTTHHHHHHHHHHHHHHHHHHTE
T ss_pred EE--EeCCHHHhhhhccccCCEEEE--------CCCCCCccc--cccCHHHhhh--cCHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 224443222 23589999987 334311100 0000000000 0111 222347888888899
Q ss_pred ccCceEEEEEecCC
Q 036911 202 LSGGHVLLSIIGND 215 (359)
Q Consensus 202 ~pGG~l~~~~~g~~ 215 (359)
+|||+|+.++....
T Consensus 225 kpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 225 KNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEEEEEEEESCCC
T ss_pred CCCcEEEEEEeecc
Confidence 99999999886543
No 247
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.54 E-value=0.0022 Score=65.82 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=51.9
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFG 125 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~ 125 (359)
..+.+|||+|||.|..|..++ +. -.+|+.-|+.. ......+. +.+. ..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la--------~~---------ga~V~giD~~~-----------~~i~~a~~~a~~~~~-~~ 115 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA--------SK---------GATIVGIDFQQ-----------ENINVCRALAEENPD-FA 115 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCH-----------HHHHHHHHHHHTSTT-SE
T ss_pred CCCCeEEEECCCCcHHHHHHH--------hC---------CCEEEEECCCH-----------HHHHHHHHHHHhcCC-Cc
Confidence 347899999999999988876 22 27899999752 11111111 1121 12
Q ss_pred CeEEecccCCcccC--CCCCCceeEEEeccccccccc
Q 036911 126 PCFIAGIPGSFYGR--LFPNKSLHFVHSSYSLHWLSQ 160 (359)
Q Consensus 126 ~~f~~~v~gsFy~~--lfp~~S~d~~~S~~alhWls~ 160 (359)
--|..+ +..+. .++++++|+|++.-.||++.+
T Consensus 116 ~~~~~~---~~~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 116 AEFRVG---RIEEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp EEEEEC---CHHHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred eEEEEC---CHHHHhhhccCCCccEEEECcchhcCCC
Confidence 234443 44332 356789999999999999876
No 248
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.49 E-value=0.0043 Score=64.61 Aligned_cols=133 Identities=10% Similarity=0.052 Sum_probs=76.0
Q ss_pred HHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 19 ANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 19 ~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
-+...+|+++...+++++.+. ....+..+|+|+|||+|+.+...++.. ++. .-.+.||.-+-
T Consensus 332 vKy~~Ye~AI~~Al~d~~~~~------~~~~~~~vVldVGaGrGpLv~~al~A~-----a~~------~~~vkVyAVEk- 393 (637)
T 4gqb_A 332 IKYSQYQQAIYKCLLDRVPEE------EKDTNVQVLMVLGAGRGPLVNASLRAA-----KQA------DRRIKLYAVEK- 393 (637)
T ss_dssp HHHHHHHHHHHHHHHHHSCGG------GTTTCEEEEEEESCTTSHHHHHHHHHH-----HHT------TCEEEEEEEES-
T ss_pred hhHHHHHHHHHHHHHHhhhhc------cccCCCcEEEEECCCCcHHHHHHHHHH-----Hhc------CCCcEEEEEEC-
Confidence 356677777776665544321 011246789999999999877666443 211 12367887775
Q ss_pred CCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcce
Q 036911 99 GNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHI 178 (359)
Q Consensus 99 ~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i 178 (359)
|.-..+ ..+..+.+++. .. |..+.|+..+- -+|..+|+++| -||-.. ..|++
T Consensus 394 -np~A~~-------a~~~v~~N~~~-dk--VtVI~gd~eev-~LPEKVDIIVS----EwMG~f----------Ll~E~-- 445 (637)
T 4gqb_A 394 -NPNAVV-------TLENWQFEEWG-SQ--VTVVSSDMREW-VAPEKADIIVS----ELLGSF----------ADNEL-- 445 (637)
T ss_dssp -CHHHHH-------HHHHHHHHTTG-GG--EEEEESCTTTC-CCSSCEEEEEC----CCCBTT----------BGGGC--
T ss_pred -CHHHHH-------HHHHHHhccCC-Ce--EEEEeCcceec-cCCcccCEEEE----EcCccc----------ccccC--
Confidence 221111 11122334442 12 34456777544 44578999999 554321 11222
Q ss_pred eecCCCCccccHHHHHHHHHHhhccCceEE
Q 036911 179 CMAKTSPVGRDFTLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 179 ~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~ 208 (359)
.-..|-+|.+=|||||.|+
T Consensus 446 -----------mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 446 -----------SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp -----------HHHHHHHHGGGEEEEEEEE
T ss_pred -----------CHHHHHHHHHhcCCCcEEc
Confidence 1136789999999999984
No 249
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.42 E-value=0.011 Score=57.77 Aligned_cols=113 Identities=10% Similarity=0.081 Sum_probs=65.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCC-CC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNF-GP 126 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~-~~ 126 (359)
..+|+|+|||+|..|+.+++ . ...+|+..|+.. ...+..+. .++... +-
T Consensus 213 ~~~VLDl~cGtG~~sl~la~--------~--------ga~~V~~vD~s~-----------~al~~A~~N~~~n~~~~~~v 265 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAM--------G--------GAMATTSVDLAK-----------RSRALSLAHFEANHLDMANH 265 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHH--------T--------TBSEEEEEESCT-----------THHHHHHHHHHHTTCCCTTE
T ss_pred CCeEEEEeeccCHHHHHHHH--------C--------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCCccce
Confidence 46999999999999988762 1 114788999753 12222221 122211 22
Q ss_pred eEEecccCCcccCCC----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 127 CFIAGIPGSFYGRLF----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.|+. ++..+.+- ...++|+|++. |+.... +++ ......+++..+++.-.+-|+
T Consensus 266 ~~~~---~D~~~~l~~~~~~~~~fD~Ii~D---------PP~~~~------~~~-----~~~~~~~~~~~ll~~~~~~L~ 322 (385)
T 2b78_A 266 QLVV---MDVFDYFKYARRHHLTYDIIIID---------PPSFAR------NKK-----EVFSVSKDYHKLIRQGLEILS 322 (385)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEEC---------CCCC----------------CCCCHHHHHHHHHHHHHHTEE
T ss_pred EEEE---CCHHHHHHHHHHhCCCccEEEEC---------CCCCCC------Chh-----hHHHHHHHHHHHHHHHHHhcC
Confidence 3444 45443221 14589999982 322110 001 011225677888888889999
Q ss_pred cCceEEEEEec
Q 036911 203 SGGHVLLSIIG 213 (359)
Q Consensus 203 pGG~l~~~~~g 213 (359)
|||.++++...
T Consensus 323 pgG~l~~~~~~ 333 (385)
T 2b78_A 323 ENGLIIASTNA 333 (385)
T ss_dssp EEEEEEEEECC
T ss_pred CCcEEEEEeCC
Confidence 99999988743
No 250
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.36 E-value=0.0024 Score=58.23 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=54.1
Q ss_pred chHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEec
Q 036911 16 TSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLN 95 (359)
Q Consensus 16 ~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~n 95 (359)
.+|.+|-..+..+++.+...+. .....+|+|+|||+|..|..+++.. .+|+..
T Consensus 6 k~~gQ~fl~d~~~~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~l~~~~-----------------~~v~~v 58 (244)
T 1qam_A 6 IKHSQNFITSKHNIDKIMTNIR----------LNEHDNIFEIGSGKGHFTLELVQRC-----------------NFVTAI 58 (244)
T ss_dssp ----CCBCCCHHHHHHHHTTCC----------CCTTCEEEEECCTTSHHHHHHHHHS-----------------SEEEEE
T ss_pred ccCCccccCCHHHHHHHHHhCC----------CCCCCEEEEEeCCchHHHHHHHHcC-----------------CeEEEE
Confidence 4566666666655544332111 1235799999999999999887321 567888
Q ss_pred CCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCC-CceeEEEecccccc
Q 036911 96 DLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPN-KSLHFVHSSYSLHW 157 (359)
Q Consensus 96 DLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~-~S~d~~~S~~alhW 157 (359)
|+.. .....++...... +++ ..+.|++.+..+++ .++ .++|+...+|
T Consensus 59 D~~~-----------~~~~~a~~~~~~~-~~v--~~~~~D~~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 59 EIDH-----------KLCKTTENKLVDH-DNF--QVLNKDILQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CSCH-----------HHHHHHHHHTTTC-CSE--EEECCCGGGCCCCSSCCC-EEEEECCGGG
T ss_pred ECCH-----------HHHHHHHHhhccC-CCe--EEEEChHHhCCcccCCCe-EEEEeCCccc
Confidence 8631 2222222221111 222 22347887777764 455 5777766655
No 251
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.33 E-value=0.0059 Score=59.54 Aligned_cols=115 Identities=15% Similarity=0.085 Sum_probs=66.2
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNFGP 126 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~~~ 126 (359)
...+|+|+|||+|..|+.++ +. ...+|+..|+.. ......+. .++...+-
T Consensus 217 ~~~~VLDl~~G~G~~~~~la--------~~--------g~~~v~~vD~s~-----------~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAA--------IA--------GADEVIGIDKSP-----------RAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHH--------HT--------TCSEEEEEESCH-----------HHHHHHHHHHHHTTCGGGE
T ss_pred CCCeEEEecCCCCHHHHHHH--------HC--------CCCEEEEEeCCH-----------HHHHHHHHHHHHcCCCccc
Confidence 35799999999999998776 21 125788888741 11111111 11211012
Q ss_pred eEEecccCCcccCCC----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 127 CFIAGIPGSFYGRLF----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.|+. ++..+.+. +.+++|+|++ +.|.... ++..+ ....+++..++..-.+-|+
T Consensus 270 ~~~~---~d~~~~~~~~~~~~~~fD~Vi~--------dpP~~~~-------~~~~~-----~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 270 KFIV---GSAFEEMEKLQKKGEKFDIVVL--------DPPAFVQ-------HEKDL-----KAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEE--------CCCCSCS-------SGGGH-----HHHHHHHHHHHHHHHTTEE
T ss_pred eEEE---CCHHHHHHHHHhhCCCCCEEEE--------CCCCCCC-------CHHHH-----HHHHHHHHHHHHHHHHhcC
Confidence 3433 45543322 2578999997 2232110 01000 0014677889998899999
Q ss_pred cCceEEEEEecC
Q 036911 203 SGGHVLLSIIGN 214 (359)
Q Consensus 203 pGG~l~~~~~g~ 214 (359)
|||.|+++....
T Consensus 327 pgG~lv~~~~~~ 338 (396)
T 2as0_A 327 DGGILVTCSCSQ 338 (396)
T ss_dssp EEEEEEEEECCT
T ss_pred CCcEEEEEECCC
Confidence 999998887544
No 252
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.17 E-value=0.0044 Score=58.34 Aligned_cols=103 Identities=12% Similarity=0.091 Sum_probs=53.3
Q ss_pred CcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEE
Q 036911 14 GDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVF 93 (359)
Q Consensus 14 g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~ 93 (359)
-..+|.+|-..+..+++.+...+. .....+|+|+|||+|..|..++ ++ ..+|+
T Consensus 16 ~~k~~Gq~fl~~~~i~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~La--------~~---------~~~v~ 68 (299)
T 2h1r_A 16 NLYFQGQHLLKNPGILDKIIYAAK----------IKSSDIVLEIGCGTGNLTVKLL--------PL---------AKKVI 68 (299)
T ss_dssp -------CEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHHT--------TT---------SSEEE
T ss_pred chhccccceecCHHHHHHHHHhcC----------CCCcCEEEEEcCcCcHHHHHHH--------hc---------CCEEE
Confidence 344555555555555444332211 1235799999999999999876 11 25788
Q ss_pred ecCCCCCchhhhhhcccchHHHHHHh---hCCCCCCeEEecccCCcccCCCCCCceeEEEeccccccccc
Q 036911 94 LNDLPGNDFNTIFKSLPGFYEKLKEV---KGSNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQ 160 (359)
Q Consensus 94 ~nDLp~NDFn~lF~~l~~~~~~~~~~---~~~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~ 160 (359)
..|+.. .....++.. .+. +++ ..+.+++.... ..++|+++++...||.+.
T Consensus 69 ~vDi~~-----------~~~~~a~~~~~~~~~--~~v--~~~~~D~~~~~--~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 69 TIDIDS-----------RMISEVKKRCLYEGY--NNL--EVYEGDAIKTV--FPKFDVCTANIPYKISSP 121 (299)
T ss_dssp EECSCH-----------HHHHHHHHHHHHTTC--CCE--EC----CCSSC--CCCCSEEEEECCGGGHHH
T ss_pred EEECCH-----------HHHHHHHHHHHHcCC--Cce--EEEECchhhCC--cccCCEEEEcCCcccccH
Confidence 888741 122222211 121 122 22346775543 348999999999888654
No 253
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.00 E-value=0.0022 Score=59.84 Aligned_cols=108 Identities=13% Similarity=0.036 Sum_probs=61.3
Q ss_pred eeccCCCCcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCC
Q 036911 7 LCMNGGRGDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNRE 86 (359)
Q Consensus 7 l~M~gG~g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~ 86 (359)
+...|=....+|-+|-..+..+++++...+. ..+ . +|+|+|||+|..|..+++ +
T Consensus 14 ~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~---------~~~-~-~VLEIG~G~G~lt~~L~~--------~------- 67 (271)
T 3fut_A 14 LERHGLFADKRFGQNFLVSEAHLRRIVEAAR---------PFT-G-PVFEVGPGLGALTRALLE--------A------- 67 (271)
T ss_dssp HHHTTCCCSTTSSCCEECCHHHHHHHHHHHC---------CCC-S-CEEEECCTTSHHHHHHHH--------T-------
T ss_pred HHhcCCCccccCCccccCCHHHHHHHHHhcC---------CCC-C-eEEEEeCchHHHHHHHHH--------c-------
Confidence 3444444455666666655556555433221 123 4 999999999999998872 2
Q ss_pred CCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCCCC-ceeEEEecccccc
Q 036911 87 APMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFPNK-SLHFVHSSYSLHW 157 (359)
Q Consensus 87 ~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp~~-S~d~~~S~~alhW 157 (359)
..+|+..|+-. .+...+++.... .++ ..+.|++....+++. ..|.++++.-.+.
T Consensus 68 --~~~V~avEid~-----------~~~~~l~~~~~~--~~v--~vi~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 68 --GAEVTAIEKDL-----------RLRPVLEETLSG--LPV--RLVFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp --TCCEEEEESCG-----------GGHHHHHHHTTT--SSE--EEEESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred --CCEEEEEECCH-----------HHHHHHHHhcCC--CCE--EEEECChhhCChhhccCccEEEecCcccc
Confidence 15677778642 222333332221 122 233478877666643 5788888654443
No 254
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.87 E-value=0.0086 Score=58.40 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=65.4
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCC-CCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGS-NFGP 126 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~-~~~~ 126 (359)
..+|+|+|||+|..|+.+++ . ...+|+..|+.. ...+..+. .++. ..+-
T Consensus 221 ~~~VLDl~cG~G~~sl~la~--------~--------g~~~V~~vD~s~-----------~al~~a~~n~~~ngl~~~~v 273 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALM--------G--------GCSQVVSVDTSQ-----------EALDIARQNVELNKLDLSKA 273 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHH--------T--------TCSEEEEEESCH-----------HHHHHHHHHHHHTTCCGGGE
T ss_pred CCeEEEeeccCCHHHHHHHH--------C--------CCCEEEEEECCH-----------HHHHHHHHHHHHcCCCccce
Confidence 46999999999999998762 1 125788888741 11111111 1121 1012
Q ss_pred eEEecccCCcccCCC----CCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhc
Q 036911 127 CFIAGIPGSFYGRLF----PNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEIL 202 (359)
Q Consensus 127 ~f~~~v~gsFy~~lf----p~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~ 202 (359)
.|+. ++..+.+. ...++|+|++. .|..... +.. .....+++..++..-.+.|+
T Consensus 274 ~~~~---~D~~~~~~~~~~~~~~fD~Ii~d--------pP~~~~~-------~~~-----~~~~~~~~~~~l~~~~~~Lk 330 (396)
T 3c0k_A 274 EFVR---DDVFKLLRTYRDRGEKFDVIVMD--------PPKFVEN-------KSQ-----LMGACRGYKDINMLAIQLLN 330 (396)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEEC--------CSSTTTC-------SSS-----SSCCCTHHHHHHHHHHHTEE
T ss_pred EEEE---CCHHHHHHHHHhcCCCCCEEEEC--------CCCCCCC-------hhH-----HHHHHHHHHHHHHHHHHhcC
Confidence 3444 45543321 14689999982 2321110 110 01124678889988899999
Q ss_pred cCceEEEEEec
Q 036911 203 SGGHVLLSIIG 213 (359)
Q Consensus 203 pGG~l~~~~~g 213 (359)
|||.++++...
T Consensus 331 pgG~l~~~~~~ 341 (396)
T 3c0k_A 331 EGGILLTFSCS 341 (396)
T ss_dssp EEEEEEEEECC
T ss_pred CCcEEEEEeCC
Confidence 99999988743
No 255
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.86 E-value=0.065 Score=54.74 Aligned_cols=140 Identities=14% Similarity=0.172 Sum_probs=69.2
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH-hhCCCCCCe
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE-VKGSNFGPC 127 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~-~~~~~~~~~ 127 (359)
+...+|+|.+||||...+.+.+.+.+.-..............+++..|+- .. ++- ..+... ..+.. .+
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid--~~-~~~------lA~~Nl~l~gi~-~~- 311 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESN--PT-TWK------LAAMNMVIRGID-FN- 311 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCC--HH-HHH------HHHHHHHHTTCC-CB-
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCC--HH-HHH------HHHHHHHHhCCC-cc-
Confidence 34459999999999887766655533221110000000013788888873 11 100 000000 01211 11
Q ss_pred EEecccCCcc-cCCCCCCceeEEEec--ccc-cccccCCCCccccCCCCCCCcceeecC--------CCCc-cccHHHHH
Q 036911 128 FIAGIPGSFY-GRLFPNKSLHFVHSS--YSL-HWLSQVPEGLVSESGVPLNKGHICMAK--------TSPV-GRDFTLFL 194 (359)
Q Consensus 128 f~~~v~gsFy-~~lfp~~S~d~~~S~--~al-hWls~~p~~~~~~~~~~~n~g~i~~~~--------~~~~-~~d~~~fL 194 (359)
+.-..|++. ...++...+|+|+++ +.. .|-... +. +..+ +..+ ..+. ..++ .|+
T Consensus 312 -i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~---~~-------~d~r-~~~g~~~~~~~~~~~~~~~~~-~Fl 378 (544)
T 3khk_A 312 -FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEK---LA-------DDPR-WTINTNGEKRILTPPTGNANF-AWM 378 (544)
T ss_dssp -CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGG---GT-------TCGG-GEECCC--CEECCCCTTCTHH-HHH
T ss_pred -cceeccchhcCcccccccccEEEECCCcCCccccchh---hh-------hhhh-hhcCcccccccccCCCcchhH-HHH
Confidence 111345544 444677899999995 222 232210 00 0011 1111 1111 3344 699
Q ss_pred HHHHHhhccCceEEEEEe
Q 036911 195 TSRSEEILSGGHVLLSII 212 (359)
Q Consensus 195 ~~Ra~EL~pGG~l~~~~~ 212 (359)
..-.+-|+|||+++++++
T Consensus 379 ~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 379 LHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHhccCceEEEEec
Confidence 999999999999999985
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.81 E-value=0.022 Score=56.45 Aligned_cols=131 Identities=9% Similarity=0.002 Sum_probs=64.8
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhcc--CCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCCC-
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLN--REAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSNF- 124 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~--~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~~- 124 (359)
..+|+|.|||||...+.+.+.+. +...... ...+..+++..|+-. ......+. ..+...
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~----~~~~~~~~~~~~~~~~i~G~Ei~~-----------~~~~lA~~nl~l~g~~~~ 236 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMK----GQSASKEKRDFLRDKALHGVDNTP-----------LVVTLASMNLYLHGIGTD 236 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHH----TCC-CCHHHHHHHHTTEEEEESCH-----------HHHHHHHHHHHHTTCCSS
T ss_pred CCEEeccCCCcchHHHHHHHHHH----HhcCCHHHHHhhcCeEEEEEeCCH-----------HHHHHHHHHHHHhCCCcC
Confidence 46999999999998777765542 1100000 000236788888631 11110110 112210
Q ss_pred CCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC
Q 036911 125 GPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG 204 (359)
Q Consensus 125 ~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG 204 (359)
..-+. .|++..... ..++|+|+++--++-...... .+.+..... +....-..|++.-.+-|+||
T Consensus 237 ~~~i~---~gD~l~~~~-~~~fD~Iv~NPPf~~~~~~~~--------~~~~~~~~~----~~~~~~~~fl~~~~~~Lk~g 300 (445)
T 2okc_A 237 RSPIV---CEDSLEKEP-STLVDVILANPPFGTRPAGSV--------DINRPDFYV----ETKNNQLNFLQHMMLMLKTG 300 (445)
T ss_dssp CCSEE---ECCTTTSCC-SSCEEEEEECCCSSCCCTTCC--------CCCCTTSSS----CCSCHHHHHHHHHHHHEEEE
T ss_pred CCCEe---eCCCCCCcc-cCCcCEEEECCCCCCcccccc--------hhhHhhcCC----CCcchHHHHHHHHHHHhccC
Confidence 11222 355554433 348999999733221111100 001111100 11122347898888999999
Q ss_pred ceEEEEEe
Q 036911 205 GHVLLSII 212 (359)
Q Consensus 205 G~l~~~~~ 212 (359)
|+++++++
T Consensus 301 G~~a~V~p 308 (445)
T 2okc_A 301 GRAAVVLP 308 (445)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEC
Confidence 99999985
No 257
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.73 E-value=0.023 Score=59.78 Aligned_cols=116 Identities=15% Similarity=0.160 Sum_probs=67.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH---hhCCC-CCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE---VKGSN-FGP 126 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~---~~~~~-~~~ 126 (359)
..+|+|+|||||..|+.++ .. .. .+|+..|+.. ...+..+. .++.. .+-
T Consensus 540 g~~VLDlg~GtG~~sl~aa--------~~-------ga-~~V~aVD~s~-----------~al~~a~~N~~~ngl~~~~v 592 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAG--------LG-------GA-RSTTTVDMSR-----------TYLEWAERNLRLNGLTGRAH 592 (703)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HT-------TC-SEEEEEESCH-----------HHHHHHHHHHHHTTCCSTTE
T ss_pred CCcEEEeeechhHHHHHHH--------HC-------CC-CEEEEEeCCH-----------HHHHHHHHHHHHcCCCccce
Confidence 4699999999999988765 11 12 5689999852 12122221 12322 122
Q ss_pred eEEecccCCcccCC-CCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCc
Q 036911 127 CFIAGIPGSFYGRL-FPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGG 205 (359)
Q Consensus 127 ~f~~~v~gsFy~~l-fp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG 205 (359)
.|+. ++.++.+ ...+++|+|++ + |+..... +.. ...-...+++..++..-.+-|+|||
T Consensus 593 ~~i~---~D~~~~l~~~~~~fD~Ii~--------D-PP~f~~~------~~~---~~~~~~~~~~~~ll~~a~~~LkpgG 651 (703)
T 3v97_A 593 RLIQ---ADCLAWLREANEQFDLIFI--------D-PPTFSNS------KRM---EDAFDVQRDHLALMKDLKRLLRAGG 651 (703)
T ss_dssp EEEE---SCHHHHHHHCCCCEEEEEE--------C-CCSBC----------------CCBHHHHHHHHHHHHHHHEEEEE
T ss_pred EEEe---cCHHHHHHhcCCCccEEEE--------C-CccccCC------ccc---hhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3444 4554422 24578999998 2 3322210 000 0001126788889988899999999
Q ss_pred eEEEEEecC
Q 036911 206 HVLLSIIGN 214 (359)
Q Consensus 206 ~l~~~~~g~ 214 (359)
+|++++..+
T Consensus 652 ~L~~s~~~~ 660 (703)
T 3v97_A 652 TIMFSNNKR 660 (703)
T ss_dssp EEEEEECCT
T ss_pred EEEEEECCc
Confidence 999887554
No 258
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.70 E-value=0.027 Score=51.94 Aligned_cols=23 Identities=26% Similarity=0.365 Sum_probs=20.0
Q ss_pred CcceEEeecCCCCcchHHHHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEI 72 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~i 72 (359)
...+|+|+|||+|.|++.+++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHH
Confidence 46899999999999999887544
No 259
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=95.61 E-value=0.029 Score=52.39 Aligned_cols=48 Identities=6% Similarity=0.034 Sum_probs=33.2
Q ss_pred CCCCCCceeEEEeccccc----ccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccC-ceEEEEEec
Q 036911 139 RLFPNKSLHFVHSSYSLH----WLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSG-GHVLLSIIG 213 (359)
Q Consensus 139 ~lfp~~S~d~~~S~~alh----Wls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pG-G~l~~~~~g 213 (359)
+.++++.+|+|.|-.|.+ |..+. .-+ ..|+.-.+-|+|| |.+++-.+-
T Consensus 134 ~~l~~~~~DlVlsD~apnsG~~~~D~~--------------------------rs~-~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGESSSSSVTEGE--------------------------RTV-RVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TTSCCCCCSEEEECCCCCCSCHHHHHH--------------------------HHH-HHHHHHHHHHTTCCSEEEEEESC
T ss_pred hhcCCCCccEEEecCccCcCchHHHHH--------------------------HHH-HHHHHHHHHhCCCCCeEEEEecC
Confidence 457788999999987766 32220 000 1255667889999 999998876
No 260
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.48 E-value=0.024 Score=56.13 Aligned_cols=32 Identities=25% Similarity=0.074 Sum_probs=24.8
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
...+|+|+|||+|..|+.+++ . ..+|+..|+.
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~--------~---------~~~V~gvD~s 321 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAK--------R---------GFNVKGFDSN 321 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHH--------T---------TCEEEEEESC
T ss_pred CCCEEEEeeccchHHHHHHHH--------c---------CCEEEEEECC
Confidence 357999999999999998762 1 1578888874
No 261
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=95.31 E-value=0.062 Score=56.41 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=57.2
Q ss_pred HHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 19 ANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 19 ~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
.+...+|+++..+++.+..+ ..+...|+|+|||+|+.+...+...-.+ ...++. +.......||..+-.
T Consensus 387 vRy~~Y~~AI~~al~d~~~~---------~~~~~VVldVGaGtGpLs~~al~A~~~a-~~~~~~-~~~~~~~kVyAVEkn 455 (745)
T 3ua3_A 387 IKYDVYGEAVVGALKDLGAD---------GRKTVVIYLLGGGRGPIGTKILKSEREY-NNTFRQ-GQESLKVKLYIVEKN 455 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---------CCSEEEEEEESCTTCHHHHHHHHHHHHH-HHHHST-TSCCCEEEEEEEECC
T ss_pred hhHHHHHHHHHHHHHHhhcc---------cCCCcEEEEECCCCCHHHHHHHHHHHHh-Cccccc-cccccccEEEEEeCC
Confidence 45566676666655554321 1235789999999999987655443211 101111 111123788888862
Q ss_pred CCchhhhhhcccchHHHHHHhhCCCCCCeEEecccCCcccCCCC-----CCceeEEEe
Q 036911 99 GNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIAGIPGSFYGRLFP-----NKSLHFVHS 151 (359)
Q Consensus 99 ~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~~v~gsFy~~lfp-----~~S~d~~~S 151 (359)
.|-.-+ . +....+++... |..+.|+..+--+| +..+|+++|
T Consensus 456 p~A~~~-------l--~~~~~Ng~~d~---VtVI~gd~eev~lp~~~~~~ekVDIIVS 501 (745)
T 3ua3_A 456 PNAIVT-------L--KYMNVRTWKRR---VTIIESDMRSLPGIAKDRGFEQPDIIVS 501 (745)
T ss_dssp HHHHHH-------H--HHHHHHTTTTC---SEEEESCGGGHHHHHHHTTCCCCSEEEE
T ss_pred hHHHHH-------H--HHHHhcCCCCe---EEEEeCchhhcccccccCCCCcccEEEE
Confidence 111100 0 01112343312 22345666554454 789999999
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.25 E-value=0.024 Score=55.24 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=26.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
..+|+|+|||+|..++.+++.+ +...|+.+|+-
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~---------------~~~~V~avDi~ 80 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET---------------PAEEVWLNDIS 80 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS---------------SCSEEEEEESC
T ss_pred CCEEEECCCchhHHHHHHHHhC---------------CCCeEEEEECC
Confidence 4799999999999999887432 23679999984
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.17 E-value=0.014 Score=53.86 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=17.8
Q ss_pred CcceEEeecCCCCcchHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~ 69 (359)
...+|+|+|||+|..|..++
T Consensus 29 ~~~~VLEIG~G~G~lt~~La 48 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLL 48 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHT
T ss_pred CcCEEEEEcccccHHHHHHH
Confidence 35799999999999999887
No 264
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=95.04 E-value=0.17 Score=49.84 Aligned_cols=32 Identities=25% Similarity=0.130 Sum_probs=25.1
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
...+|+|+|||+|..|+.+.+. ..+|+..|..
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~-----------------~~~V~gvD~s 317 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQ-----------------AASVVGVEGV 317 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTT-----------------SSEEEEEESC
T ss_pred CCCEEEECCCCCCHHHHHHHhh-----------------CCEEEEEeCC
Confidence 3569999999999999988611 2678888874
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=94.75 E-value=0.051 Score=52.75 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=25.3
Q ss_pred CCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 49 PECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
+++.+|+|+|||+|..+..++ ++ ++ .+|...|+-
T Consensus 187 p~pkrVL~IGgG~G~~arell--------k~-------~~-~~Vt~VEID 220 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIV--------KL-------KP-KMVTMVEID 220 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHH--------TT-------CC-SEEEEEESC
T ss_pred CCCCEEEEEECChhHHHHHHH--------HC-------CC-CEEEEEECC
Confidence 568999999999999877665 21 23 677777873
No 266
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=94.72 E-value=0.16 Score=51.80 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=68.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHH-hhCCCCCCeE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKE-VKGSNFGPCF 128 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~-~~~~~~~~~f 128 (359)
...+|+|.+||||...+.+.+.+ + .....+++..|+-. . ++- ..+... ..|......-
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l----~--------~~~~~~i~G~Eid~--~-~~~------lA~~Nl~l~gi~~~~~~ 279 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYS----R--------QPQTVVYFGQELNT--S-TYN------LARMNMILHGVPIENQF 279 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHC----S--------CTTTCEEEEEESCH--H-HHH------HHHHHHHHTTCCGGGEE
T ss_pred CCCEEeecccchhHHHHHHHHHH----H--------hccCceEEEEECcH--H-HHH------HHHHHHHHcCCCcCccc
Confidence 35799999999999877766433 1 11347889888731 1 100 000000 0121101111
Q ss_pred EecccCCcccC---CCCCCceeEEEec--ccccccccCCCCccccCCCCCCCcceeecC-CCCc-cccHHHHHHHHHHhh
Q 036911 129 IAGIPGSFYGR---LFPNKSLHFVHSS--YSLHWLSQVPEGLVSESGVPLNKGHICMAK-TSPV-GRDFTLFLTSRSEEI 201 (359)
Q Consensus 129 ~~~v~gsFy~~---lfp~~S~d~~~S~--~alhWls~~p~~~~~~~~~~~n~g~i~~~~-~~~~-~~d~~~fL~~Ra~EL 201 (359)
-..|++... .++...+|+|+++ |...|-..- ....+ +.|.. .+ ..+. ..|+ .|+..-.+-|
T Consensus 280 --I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~-~~~~d---~rf~~-----~G~~~~~s~~~~-~Fl~~~l~~L 347 (542)
T 3lkd_A 280 --LHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASS-GFMDD---PRFSP-----FGKLAPKSKADF-AFLLHGYYHL 347 (542)
T ss_dssp --EEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCG-GGGGS---TTTGG-----GSSCCCTTCCHH-HHHHHHHHTB
T ss_pred --eEecceecccccccccccccEEEecCCcCCccccch-hhhhh---hhhhh-----hhhcCCCchhhH-HHHHHHHHHh
Confidence 123555544 2567899999996 334442110 00000 00100 01 1111 3344 6999999999
Q ss_pred c-cCceEEEEEec
Q 036911 202 L-SGGHVLLSIIG 213 (359)
Q Consensus 202 ~-pGG~l~~~~~g 213 (359)
+ |||+++++++.
T Consensus 348 k~~gGr~a~VlP~ 360 (542)
T 3lkd_A 348 KQDNGVMAIVLPH 360 (542)
T ss_dssp CTTTCEEEEEEET
T ss_pred CCCceeEEEEecc
Confidence 9 99999999863
No 267
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=94.29 E-value=0.48 Score=46.16 Aligned_cols=21 Identities=19% Similarity=0.151 Sum_probs=16.9
Q ss_pred CcceEEeecCCCCcchHHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLLW 70 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~ 70 (359)
...+|+|.|||||...+..+.
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 357899999999988776654
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=93.79 E-value=0.19 Score=49.19 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=38.6
Q ss_pred CCCcchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcce
Q 036911 12 GRGDTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQ 91 (359)
Q Consensus 12 G~g~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~ 91 (359)
|.....|+-+...=+.....+...+... .....+|+|++||+|..++.+++.. ....+
T Consensus 22 ~~~~~Ffn~~~~~nR~l~~~~~~~~~~~--------~~~g~~VLDlfaGtG~~sl~aa~~~--------------~ga~~ 79 (392)
T 3axs_A 22 SDMPVFYNPRMRVNRDLAVLGLEYLCKK--------LGRPVKVADPLSASGIRAIRFLLET--------------SCVEK 79 (392)
T ss_dssp TTCCSSCCGGGHHHHHHHHHHHHHHHHH--------HCSCEEEEESSCTTSHHHHHHHHHC--------------SCEEE
T ss_pred CCCCEEEcCCcHHHHHHHHHHHHHHhhc--------cCCCCEEEECCCcccHHHHHHHHhC--------------CCCCE
Confidence 4456778555554444433222222110 0124799999999999999887331 01268
Q ss_pred EEecCCC
Q 036911 92 VFLNDLP 98 (359)
Q Consensus 92 v~~nDLp 98 (359)
|+.+|+-
T Consensus 80 V~avDi~ 86 (392)
T 3axs_A 80 AYANDIS 86 (392)
T ss_dssp EEEECSC
T ss_pred EEEEECC
Confidence 9999984
No 269
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=93.69 E-value=0.059 Score=49.43 Aligned_cols=16 Identities=13% Similarity=0.073 Sum_probs=14.8
Q ss_pred cceEEeecCCCCcchH
Q 036911 51 CLKIADLGCSSGPNTL 66 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~ 66 (359)
..+|+|+|||+|..|.
T Consensus 22 ~~~VLEIG~G~G~lt~ 37 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE 37 (252)
T ss_dssp TCCEEEECCTTTTTHH
T ss_pred cCEEEEECCCCcHHHH
Confidence 4689999999999999
No 270
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=93.39 E-value=0.43 Score=46.34 Aligned_cols=22 Identities=18% Similarity=0.146 Sum_probs=17.6
Q ss_pred CcceEEeecCCCCcchHHHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLLWE 71 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ 71 (359)
...+|+|.|||||..++..+..
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHH
Confidence 3578999999999988776543
No 271
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=93.19 E-value=0.48 Score=46.05 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=16.5
Q ss_pred cceEEeecCCCCcchHHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLLW 70 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~ 70 (359)
...|+|.+||||...+..+.
T Consensus 195 ~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHH
Confidence 57899999999988776653
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=93.11 E-value=0.14 Score=52.23 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhccCceEEEEEe
Q 036911 191 TLFLTSRSEEILSGGHVLLSII 212 (359)
Q Consensus 191 ~~fL~~Ra~EL~pGG~l~~~~~ 212 (359)
..|+..-.+-|+|||+++++++
T Consensus 292 ~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 292 LCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEec
Confidence 3789888999999999999986
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=93.07 E-value=0.022 Score=53.24 Aligned_cols=47 Identities=9% Similarity=0.130 Sum_probs=29.2
Q ss_pred cchHHHhhHHHHHHHHHhHHHHHHHHHHhhhcCCCCcceEEeecCCCCcchHHHHHH
Q 036911 15 DTSYANNSKIQKRAMLTAKPILQDSIKKLYCNRLPECLKIADLGCSSGPNTLSLLWE 71 (359)
Q Consensus 15 ~~sY~~ns~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaDlGCs~G~nt~~l~~~ 71 (359)
..+|.+|-..+..+++.+...+. .....+|+|+|||+|..|..+++.
T Consensus 17 ~k~~GQ~fL~d~~i~~~iv~~~~----------~~~~~~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 17 RKRFGQNFLVDHGVIDAIVAAIR----------PERGERMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp -CCCSCCEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHHHHH
T ss_pred cccCCccccCCHHHHHHHHHhcC----------CCCcCEEEEEccccHHHHHHHHHh
Confidence 34555555555555544332211 123579999999999999988843
No 274
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=92.58 E-value=0.28 Score=46.30 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=27.1
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
..+|+|+|||+|..|..+++.+ .+..+|+.+|+.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~--------------~~~g~V~a~D~~ 136 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALL--------------KNQGKIFAFDLD 136 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH--------------TTCSEEEEEESC
T ss_pred CCEEEEeCCChhHHHHHHHHHh--------------CCCCEEEEEeCC
Confidence 4699999999999999887443 134789999974
No 275
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=92.07 E-value=0.11 Score=48.49 Aligned_cols=19 Identities=26% Similarity=0.384 Sum_probs=16.2
Q ss_pred cceEEeecCCCCcchHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~ 69 (359)
..+|+|||||.|..+.-++
T Consensus 91 ~~~VLDLGaAPGGWsQvAa 109 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAA 109 (282)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHH
Confidence 4599999999999887665
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=92.04 E-value=1.3 Score=47.24 Aligned_cols=23 Identities=22% Similarity=0.193 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhccCceEEEEEe
Q 036911 190 FTLFLTSRSEEILSGGHVLLSII 212 (359)
Q Consensus 190 ~~~fL~~Ra~EL~pGG~l~~~~~ 212 (359)
...|+..-.+-|+|||++++.++
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEC
Confidence 56799888999999999999986
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=91.80 E-value=0.023 Score=52.05 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=25.3
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
...+|+|+|||+|..|..++ ++ +..+|+.-|+-
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~--------~~--------~~~~v~avEid 63 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLL--------QH--------PLKKLYVIELD 63 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHT--------TS--------CCSEEEEECCC
T ss_pred CcCEEEEEcCchHHHHHHHH--------Hc--------CCCeEEEEECC
Confidence 35799999999999998886 21 23678888874
No 278
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=90.95 E-value=0.8 Score=43.25 Aligned_cols=103 Identities=17% Similarity=0.291 Sum_probs=57.1
Q ss_pred CCcceEEeecC------CCCcchHHHHHHHHHHHHHHhhhccCCCCc-ceEEecCCCCCchhhhhhcccchHHHHHHhhC
Q 036911 49 PECLKIADLGC------SSGPNTLSLLWEIIDTIDGTCKRLNREAPM-YQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKG 121 (359)
Q Consensus 49 ~~~~~IaDlGC------s~G~nt~~l~~~ii~~i~~~~~~~~~~~p~-~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~ 121 (359)
|...+|+|+|+ +-|. .++ ++. .|+ ..|+-+|| ||+.+.
T Consensus 108 p~gmrVLDLGA~s~kg~APGS---~VL-------r~~-------~p~g~~VVavDL--~~~~sd---------------- 152 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT---AVL-------RQW-------LPTGTLLVDSDL--NDFVSD---------------- 152 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH---HHH-------HHH-------SCTTCEEEEEES--SCCBCS----------------
T ss_pred cCCCEEEeCCCCCCCCCCCcH---HHH-------HHh-------CCCCcEEEEeeC--cccccC----------------
Confidence 66899999996 6554 122 111 244 48888998 555431
Q ss_pred CCCCCeEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHH-HHHHHHHHh
Q 036911 122 SNFGPCFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFT-LFLTSRSEE 200 (359)
Q Consensus 122 ~~~~~~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~-~fL~~Ra~E 200 (359)
.++++. |++. .+...+.+|+|+|=.| |. .. |.+ .........+. .-|..-.+-
T Consensus 153 ---a~~~Iq---GD~~-~~~~~~k~DLVISDMA-------PN-tT---------G~~--D~d~~Rs~~L~ElALdfA~~~ 206 (344)
T 3r24_A 153 ---ADSTLI---GDCA-TVHTANKWDLIISDMY-------DP-RT---------KHV--TKENDSKEGFFTYLCGFIKQK 206 (344)
T ss_dssp ---SSEEEE---SCGG-GEEESSCEEEEEECCC-------CT-TS---------CSS--CSCCCCCCTHHHHHHHHHHHH
T ss_pred ---CCeEEE---cccc-ccccCCCCCEEEecCC-------CC-cC---------Ccc--ccchhHHHHHHHHHHHHHHHh
Confidence 235555 4543 3445688999999333 21 11 110 00000112222 234333456
Q ss_pred hccCceEEEEEe
Q 036911 201 ILSGGHVLLSII 212 (359)
Q Consensus 201 L~pGG~l~~~~~ 212 (359)
|+|||.|++=.|
T Consensus 207 LkpGGsFvVKVF 218 (344)
T 3r24_A 207 LALGGSIAVKIT 218 (344)
T ss_dssp EEEEEEEEEEEC
T ss_pred CcCCCEEEEEEe
Confidence 999999999887
No 279
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.89 E-value=1 Score=42.63 Aligned_cols=33 Identities=21% Similarity=0.143 Sum_probs=23.8
Q ss_pred cceeecCCCCc--cccH-HHHHHHHHHhhccCceEE
Q 036911 176 GHICMAKTSPV--GRDF-TLFLTSRSEEILSGGHVL 208 (359)
Q Consensus 176 g~i~~~~~~~~--~~d~-~~fL~~Ra~EL~pGG~l~ 208 (359)
+.+|..+++|. -+=| ..+|+.-++-++|||.|+
T Consensus 188 Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 188 DAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp EEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred eEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 46777777776 1223 358888899999999874
No 280
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=89.45 E-value=0.36 Score=45.41 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=18.2
Q ss_pred CCcceEEeecCCCCcchHHHH
Q 036911 49 PECLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 49 ~~~~~IaDlGCs~G~nt~~l~ 69 (359)
....+|+|||||.|..|..++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~ 100 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAA 100 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHH
T ss_pred CCCCEEEEcCCCCCHHHHHHH
Confidence 456899999999999988776
No 281
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=89.31 E-value=0.28 Score=46.16 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=26.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
..+|+|+|||+|..|..+++.. |..+|+..|+.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~---------------~~~~VigvD~d 59 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHC---------------PGCRIIGIDVD 59 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHC---------------TTCEEEEEESC
T ss_pred CCEEEEEeCCcCHHHHHHHHHC---------------CCCEEEEEECC
Confidence 4699999999999999887332 34788988974
No 282
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=88.66 E-value=0.44 Score=40.39 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=25.4
Q ss_pred CcceEEeecCCCCc-chHHHHHHHHHHHHHHhhhccCCCCcceEEecCCC
Q 036911 50 ECLKIADLGCSSGP-NTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLP 98 (359)
Q Consensus 50 ~~~~IaDlGCs~G~-nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp 98 (359)
.+.+|+|+|||+|. ++..|.++ ..+.|+..|+-
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~----------------~g~~V~atDIn 68 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH----------------SKVDLVLTDIK 68 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH----------------SCCEEEEECSS
T ss_pred CCCcEEEEccCCChHHHHHHHHh----------------CCCeEEEEECC
Confidence 35799999999994 88887621 13889999974
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=87.80 E-value=1.4 Score=42.84 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=47.0
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEE
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFI 129 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~ 129 (359)
.-.+++|+||+.|.-|-.++ ++ ...|+..|.- +.- ..+... .+-.++
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~--------~r---------g~~V~aVD~~-----------~l~-~~l~~~----~~V~~~ 257 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLV--------KR---------NMWVYSVDNG-----------PMA-QSLMDT----GQVTWL 257 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT---------TCEEEEECSS-----------CCC-HHHHTT----TCEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHH--------HC---------CCEEEEEEhh-----------hcC-hhhccC----CCeEEE
Confidence 35899999999999998876 22 2689999953 111 112111 012333
Q ss_pred ecccCCcccCCCCCCceeEEEecccccc
Q 036911 130 AGIPGSFYGRLFPNKSLHFVHSSYSLHW 157 (359)
Q Consensus 130 ~~v~gsFy~~lfp~~S~d~~~S~~alhW 157 (359)
.++.+....+.+.+|+++|=.+.+|
T Consensus 258 ---~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 258 ---REDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp ---CSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred ---eCccccccCCCCCcCEEEEcCCCCh
Confidence 3677776777788999999666554
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=85.46 E-value=8.8 Score=35.54 Aligned_cols=21 Identities=10% Similarity=0.002 Sum_probs=17.6
Q ss_pred CcceEEeecCCCCcchHHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLLW 70 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~ 70 (359)
.+.+|+|+||+.|..++.+.+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~ 126 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRG 126 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHH
T ss_pred CCCcEEEeecCchHHHHHHHH
Confidence 468999999999998887653
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=85.38 E-value=4.8 Score=37.64 Aligned_cols=120 Identities=9% Similarity=0.061 Sum_probs=64.7
Q ss_pred CCCcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhc-ccchHHHHHHhhCCCCCC
Q 036911 48 LPECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKS-LPGFYEKLKEVKGSNFGP 126 (359)
Q Consensus 48 ~~~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~-l~~~~~~~~~~~~~~~~~ 126 (359)
.|++.+||=+|-|.|.....++ +. ++..++...|+-. ..-.+.+. +|. +....-++++-
T Consensus 81 ~p~pk~VLIiGgGdG~~~revl--------k~-------~~v~~v~~VEID~-~Vv~~a~~~lp~----~~~~~~~dpRv 140 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVT--------RH-------KNVESITMVEIDA-GVVSFCRQYLPN----HNAGSYDDPRF 140 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHH--------TC-------TTCCEEEEEESCH-HHHHHHHHHCHH----HHTTGGGCTTE
T ss_pred CCCCCeEEEECCCchHHHHHHH--------Hc-------CCcceEEEEcCCH-HHHHHHHhcCcc----ccccccCCCcE
Confidence 3678999999999998776665 21 2335666666631 01011100 010 00000012232
Q ss_pred eEEecccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCce
Q 036911 127 CFIAGIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGH 206 (359)
Q Consensus 127 ~f~~~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~ 206 (359)
-.+.+.+..|-++ .++++|+|+.=..=.+ ..+..+ +.+ .|++...+-|+|||.
T Consensus 141 ~v~~~Dg~~~l~~--~~~~yDvIi~D~~dp~--~~~~~L-------~t~----------------eFy~~~~~~L~p~Gv 193 (294)
T 3o4f_A 141 KLVIDDGVNFVNQ--TSQTFDVIISDCTDPI--GPGESL-------FTS----------------AFYEGCKRCLNPGGI 193 (294)
T ss_dssp EEEESCTTTTTSC--SSCCEEEEEESCCCCC--CTTCCS-------SCC----------------HHHHHHHHTEEEEEE
T ss_pred EEEechHHHHHhh--ccccCCEEEEeCCCcC--CCchhh-------cCH----------------HHHHHHHHHhCCCCE
Confidence 3344455555433 5678999998432111 001111 111 499999999999999
Q ss_pred EEEEEecC
Q 036911 207 VLLSIIGN 214 (359)
Q Consensus 207 l~~~~~g~ 214 (359)
|+......
T Consensus 194 ~v~q~~sp 201 (294)
T 3o4f_A 194 FVAQNGVC 201 (294)
T ss_dssp EEEEEEES
T ss_pred EEEecCCc
Confidence 99876544
No 286
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=81.43 E-value=8.9 Score=40.06 Aligned_cols=20 Identities=20% Similarity=0.214 Sum_probs=16.5
Q ss_pred cceEEeecCCCCcchHHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLLW 70 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~ 70 (359)
..+|+|.+||||...+..+.
T Consensus 191 ~~~llDP~CGSGt~lIeAa~ 210 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAM 210 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHH
Confidence 56899999999988776653
No 287
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=80.77 E-value=3.5 Score=42.74 Aligned_cols=23 Identities=26% Similarity=0.400 Sum_probs=20.5
Q ss_pred CcceEEeecCCCCcchHHHHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEI 72 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~i 72 (359)
..++|+|+|.|+|.|.+.+++..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~ 80 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDF 80 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHHH
Confidence 47999999999999999998664
No 288
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=80.37 E-value=0.59 Score=42.75 Aligned_cols=19 Identities=16% Similarity=0.184 Sum_probs=17.1
Q ss_pred cceEEeecCCCCcchHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~ 69 (359)
..+|+|+|||+|..|+.+.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA 102 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLA 102 (258)
T ss_dssp CCCEEETTCTTCHHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHH
Confidence 4699999999999999886
No 289
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=77.61 E-value=2.6 Score=38.94 Aligned_cols=22 Identities=9% Similarity=0.196 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhccCceEEEEEe
Q 036911 191 TLFLTSRSEEILSGGHVLLSII 212 (359)
Q Consensus 191 ~~fL~~Ra~EL~pGG~l~~~~~ 212 (359)
..+++.-.+-|+|||.+++...
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEC
Confidence 4566666788999999998874
No 290
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=74.27 E-value=2.2 Score=40.78 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=16.5
Q ss_pred cceEEeecCCCCcchHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~ 69 (359)
..+|+|+|||+|..|+.+.
T Consensus 214 ~~~vLDl~cG~G~~~l~la 232 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALA 232 (369)
T ss_dssp CSEEEEESCTTSHHHHHHG
T ss_pred CCEEEEccCCCCHHHHHHH
Confidence 3679999999999999765
No 291
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=69.71 E-value=5.7 Score=47.60 Aligned_cols=109 Identities=11% Similarity=0.102 Sum_probs=45.5
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCCchhhhhhcccchHHHHHHhhCCCCCCeEEe
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGNDFNTIFKSLPGFYEKLKEVKGSNFGPCFIA 130 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~NDFn~lF~~l~~~~~~~~~~~~~~~~~~f~~ 130 (359)
.++|+++|.|+|..|..+++.+ .. .+....+..+.|....-|...-. .|. .+.-..+. +
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l----~~------~~~~~~~yt~td~s~~~~~~a~~---~f~-~~di~~~~-----~-- 1299 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALL----NT------QPVMDLDYTATDRNPQALEAAQA---KLE-QLHVTQGQ-----W-- 1299 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHT----TT------SSSCEEEEEEECSSSSSTTTTTT---THH-HHTEEEEC-----C--
T ss_pred CceEEEECCCccHHHHHHHHhh----cc------cCcccceEEEecCChHHHHHHHH---Hhh-hccccccc-----c--
Confidence 6899999999999887666443 10 01113578888876432211110 010 01000000 0
Q ss_pred cccCCcccCCCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHHHHHHHhhccCceEEEE
Q 036911 131 GIPGSFYGRLFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFLTSRSEEILSGGHVLLS 210 (359)
Q Consensus 131 ~v~gsFy~~lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL~~Ra~EL~pGG~l~~~ 210 (359)
-+.+ .+.|.++++|+++.+..||=..++.. .|+...+-|+|||+|++.
T Consensus 1300 -d~~~--~~~~~~~~ydlvia~~vl~~t~~~~~-----------------------------~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1300 -DPAN--PAPGSLGKADLLVCNCALATLGDPAV-----------------------------AVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp -CSSC--CCC-----CCEEEEECC-------------------------------------------------CCEEEEE
T ss_pred -cccc--cccCCCCceeEEEEcccccccccHHH-----------------------------HHHHHHHhcCCCcEEEEE
Confidence 0000 02234568999999988885333322 344456678999999886
Q ss_pred Ee
Q 036911 211 II 212 (359)
Q Consensus 211 ~~ 212 (359)
-.
T Consensus 1348 e~ 1349 (2512)
T 2vz8_A 1348 TL 1349 (2512)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 292
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=67.61 E-value=2 Score=42.14 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=16.5
Q ss_pred cceEEeecCCCCcchHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~ 69 (359)
..+|+|+|||+|..++.+.
T Consensus 94 g~~VLDLgcG~G~~al~LA 112 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALM 112 (410)
T ss_dssp TCEEEESSCSSSHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHH
Confidence 4689999999999988765
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=66.05 E-value=29 Score=34.82 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=17.0
Q ss_pred cceEEeecCCCCcchHHHHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLLWEI 72 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~i 72 (359)
..+|+|-.||||..-+...+.+
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l 239 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHL 239 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHH
T ss_pred CCEEEeCCCCcchHHHHHHHHH
Confidence 4599999999998766655444
No 294
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=64.85 E-value=2.5 Score=38.68 Aligned_cols=18 Identities=17% Similarity=0.278 Sum_probs=17.0
Q ss_pred ceEEeecCCCCcchHHHH
Q 036911 52 LKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 52 ~~IaDlGCs~G~nt~~l~ 69 (359)
.+|+|+|||+|..|+.++
T Consensus 90 ~~VLDl~~G~G~dal~lA 107 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLA 107 (258)
T ss_dssp CCEEETTCTTCHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHH
Confidence 799999999999999887
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=57.33 E-value=5.5 Score=37.49 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=25.0
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGN 100 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~N 100 (359)
..+|+|||||.|..|.-.+ .. ..+ -.|+.-|+-.+
T Consensus 95 ~~~VlDLGaapGGwsq~~~--------~~------~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMA--------TQ------KRV-QEVRGYTKGGP 129 (321)
T ss_dssp CEEEEEETCTTCHHHHHHT--------TC------TTE-EEEEEECCCST
T ss_pred CCEEEEeCCCCCcHHHHHH--------hh------cCC-CEEEEEEcCCC
Confidence 4599999999999987554 11 122 46888898765
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=56.80 E-value=9.4 Score=35.69 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=18.1
Q ss_pred cHHHHHHHHHHhhccCceEEEEEec
Q 036911 189 DFTLFLTSRSEEILSGGHVLLSIIG 213 (359)
Q Consensus 189 d~~~fL~~Ra~EL~pGG~l~~~~~g 213 (359)
.+...|+.-.+-|+|||.+++...-
T Consensus 62 ~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 62 WFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHCcCCcEEEEEECC
Confidence 3445555557789999999988753
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=56.56 E-value=7.5 Score=35.54 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=24.7
Q ss_pred cceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCCC
Q 036911 51 CLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPGN 100 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~N 100 (359)
..+|+|||||.|..|.-.+ .. ..+ -.|+.-|+-..
T Consensus 79 g~~VvDLGaapGGWSq~~a--------~~------~g~-~~V~avdvG~~ 113 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCA--------GL------KKV-TEVRGYTKGGP 113 (267)
T ss_dssp CEEEEEESCTTSHHHHHHH--------TS------TTE-EEEEEECCCST
T ss_pred CCEEEEcCCCCCcHHHHHH--------Hh------cCC-CEEEEEecCCC
Confidence 4599999999999987554 11 123 47888888543
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=51.45 E-value=8.7 Score=35.33 Aligned_cols=19 Identities=11% Similarity=0.024 Sum_probs=15.6
Q ss_pred cceEEeecCCCCcchHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~ 69 (359)
.-+|+|++||+|..++..+
T Consensus 236 ~~~vlD~f~GsGt~~~~a~ 254 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAA 254 (297)
T ss_dssp TCEEEETTCTTTHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 4689999999998777654
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=48.34 E-value=15 Score=32.94 Aligned_cols=20 Identities=5% Similarity=0.144 Sum_probs=14.5
Q ss_pred HHHHHHHHhhccCceEEEEE
Q 036911 192 LFLTSRSEEILSGGHVLLSI 211 (359)
Q Consensus 192 ~fL~~Ra~EL~pGG~l~~~~ 211 (359)
.+|+.-.+-|+|||.+++..
T Consensus 55 ~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 55 RWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCeEEEEEc
Confidence 34444467799999998875
No 300
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=43.85 E-value=21 Score=33.29 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=29.9
Q ss_pred CCCCCceeEEEecccccccccCCCCccccCCCCCCCcceeecCCCCccccHHHHH----HHHHHhhccCceEEEEEe
Q 036911 140 LFPNKSLHFVHSSYSLHWLSQVPEGLVSESGVPLNKGHICMAKTSPVGRDFTLFL----TSRSEEILSGGHVLLSII 212 (359)
Q Consensus 140 lfp~~S~d~~~S~~alhWls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~d~~~fL----~~Ra~EL~pGG~l~~~~~ 212 (359)
.+|++++|+|+. .||||.+. ..-....+|..++ ..-.+-|+|||.+++..-
T Consensus 53 ~l~~~svDlI~t------------------DPPY~~~~----d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 53 KLPDDSVQLIIC------------------DPPYNIML----ADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp TSCTTCEEEEEE------------------CCCSBCCG----GGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hCccCCcCEEEE------------------CCCCCCCC----CCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 357789999998 24454431 0000133444444 444667999999988753
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=41.76 E-value=2.1e+02 Score=26.28 Aligned_cols=76 Identities=7% Similarity=-0.081 Sum_probs=41.9
Q ss_pred ccHHHHHHHHHHhhccCceEEEEEecCCCCCCCCchhHHHHHHHHHHHHHHhccchhh-hhc-cCCcCc-cCCC-HHHHH
Q 036911 188 RDFTLFLTSRSEEILSGGHVLLSIIGNDRKPGDPRCTGWELLGVTLNDMVLEGLVEEA-KVD-WFNLPY-YAPS-PEEVR 263 (359)
Q Consensus 188 ~d~~~fL~~Ra~EL~pGG~l~~~~~g~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e-~~d-~f~~P~-y~~s-~~E~~ 263 (359)
++-..+|+.-++-+.||+.+++..+..+. +. .. ...+.|+.+.+-... +.+ .+ .|+ ++++ .+|+.
T Consensus 195 ~~~~~ll~~l~~~~~~gs~l~~d~~~~~~----~~--~~----~~~~~~~~~~~~~~g~~~~~~l-~~~~~~~~~~~~~~ 263 (310)
T 2uyo_A 195 TAQDGLFTEIGGLSAVGSRIAVETSPLHG----DE--WR----EQMQLRFRRVSDALGFEQAVDV-QELIYHDENRAVVA 263 (310)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEECCCTTC----SH--HH----HHHHHHHHHHHC------------CCTTCCTTCCCHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEecCCCC----cc--hh----HHHHHHHHHHHHHcCCcCCCCc-cccccCCCChHHHH
Confidence 35566887767777899999999876542 10 00 112233311110100 000 11 233 4468 89999
Q ss_pred HHHhcCCceEEe
Q 036911 264 HVIQTEGSFNIR 275 (359)
Q Consensus 264 ~~i~~~Gsf~i~ 275 (359)
+.+.+.| |++.
T Consensus 264 ~~f~~~G-~~~~ 274 (310)
T 2uyo_A 264 DWLNRHG-WRAT 274 (310)
T ss_dssp HHHTTTT-EEEE
T ss_pred HHHHHCc-Cccc
Confidence 9999999 9876
No 302
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=40.87 E-value=54 Score=31.22 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhccCceEEEEEecCCC
Q 036911 191 TLFLTSRSEEILSGGHVLLSIIGNDR 216 (359)
Q Consensus 191 ~~fL~~Ra~EL~pGG~l~~~~~g~~~ 216 (359)
..+|..-.+-|+|||+||-++..-..
T Consensus 264 ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 264 VQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred HHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 35676667778999999999876654
No 303
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=39.09 E-value=17 Score=33.38 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=16.4
Q ss_pred CcceEEeecCCCCcchHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~ 69 (359)
...+|+||||+-|.=|.-.+
T Consensus 73 pg~~VVDLGaAPGGWSQvAa 92 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAA 92 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHT
T ss_pred CCCEEEEcCCCCCHHHHHHh
Confidence 36899999999999776554
No 304
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=35.45 E-value=24 Score=32.71 Aligned_cols=20 Identities=10% Similarity=-0.090 Sum_probs=17.9
Q ss_pred cceEEeecCCCCcchHHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLLW 70 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~ 70 (359)
...++|.+||.|.-|..+++
T Consensus 23 gg~~VD~T~G~GGHS~~il~ 42 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILE 42 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHH
Confidence 46999999999999998884
No 305
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=35.13 E-value=35 Score=34.88 Aligned_cols=23 Identities=26% Similarity=0.365 Sum_probs=20.5
Q ss_pred CcceEEeecCCCCcchHHHHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEI 72 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~i 72 (359)
..++|+|+|-|+|.|.+..++..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~ 88 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAF 88 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHH
T ss_pred CceEEEEeCCchHHHHHHHHHHH
Confidence 47999999999999999998664
No 306
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=31.37 E-value=58 Score=31.40 Aligned_cols=22 Identities=14% Similarity=0.080 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhccCceEEEEEe
Q 036911 191 TLFLTSRSEEILSGGHVLLSII 212 (359)
Q Consensus 191 ~~fL~~Ra~EL~pGG~l~~~~~ 212 (359)
+.|++...+-|+|||.|+....
T Consensus 311 ~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 311 RLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEecC
Confidence 4689999999999999987653
No 307
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=28.53 E-value=37 Score=25.16 Aligned_cols=32 Identities=25% Similarity=0.501 Sum_probs=25.4
Q ss_pred ccCCcCccCCCHHHHHHHHh----cCCceEEeEEEEE
Q 036911 248 DWFNLPYYAPSPEEVRHVIQ----TEGSFNIRRFDIH 280 (359)
Q Consensus 248 d~f~~P~y~~s~~E~~~~i~----~~Gsf~i~~~e~~ 280 (359)
.+|-+|.|..|+||-..+-+ +.| |.|.++..-
T Consensus 45 ~s~EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVRPe 80 (84)
T 2lmc_A 45 HSFEVPIYAETLDEALELAEWQYVPAG-FEVTRVRPC 80 (84)
T ss_dssp CEEEEEECCSSHHHHHHHHHHTTGGGT-CEEEEEEEE
T ss_pred ceEEEeeecccHHHHHHHHHHHhhhcc-ceEEEeccc
Confidence 46789999999999888776 346 999888643
No 308
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=26.52 E-value=46 Score=29.01 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhccchhhhhccCCcCccCCCHHHHHHHHhcC
Q 036911 225 GWELLGVTLNDMVLEGLVEEAKVDWFNLPYYAPSPEEVRHVIQTE 269 (359)
Q Consensus 225 ~~~~l~~al~~mv~eGli~~e~~d~f~~P~y~~s~~E~~~~i~~~ 269 (359)
.|+-+-+-++.|+.+|.|+++..+.+ .+..+++|+.+.|+++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~~~i---~~~d~~~e~~~~l~~~ 199 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAMDSL---VVVDNVEAALEACAPE 199 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHHHTS---EEESSHHHHHHHHSCC
T ss_pred cchHHHHHHHHHHHCCCCCHHHCCeE---EEeCCHHHHHHHHhcC
Confidence 67777777789999999999976644 5788999999888753
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=25.38 E-value=34 Score=32.62 Aligned_cols=21 Identities=24% Similarity=0.159 Sum_probs=18.8
Q ss_pred cceEEeecCCCCcchHHHHHH
Q 036911 51 CLKIADLGCSSGPNTLSLLWE 71 (359)
Q Consensus 51 ~~~IaDlGCs~G~nt~~l~~~ 71 (359)
..+|+|+|.|.|..|..|++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~ 79 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNK 79 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHhh
Confidence 478999999999999999864
No 310
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=23.82 E-value=4.3e+02 Score=24.36 Aligned_cols=35 Identities=29% Similarity=0.367 Sum_probs=25.9
Q ss_pred CcceEEeecCCCCcchHHHHHHHHHHHHHHhhhccCCCCcceEEecCCCC
Q 036911 50 ECLKIADLGCSSGPNTLSLLWEIIDTIDGTCKRLNREAPMYQVFLNDLPG 99 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~~~ii~~i~~~~~~~~~~~p~~~v~~nDLp~ 99 (359)
....|+.||||-..-...+... .+.+.+|=-|+|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~---------------~~~~~~~EvD~P~ 131 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQM---------------FPHLAYVDIDYNE 131 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHH---------------CTTEEEEEEECHH
T ss_pred CCcEEEEeCCCCccHHHHhcCc---------------CCCCEEEECCCHH
Confidence 3579999999999888777521 1357888788873
No 311
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=22.95 E-value=93 Score=29.96 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=18.4
Q ss_pred CCCcceEEeecCCCCcchHHHHHH
Q 036911 48 LPECLKIADLGCSSGPNTLSLLWE 71 (359)
Q Consensus 48 ~~~~~~IaDlGCs~G~nt~~l~~~ 71 (359)
.|.+++|+|+|.|+|.+..-++..
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~ 101 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRA 101 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCcEEEEECCCcchHHHHHHHH
Confidence 456899999999999866555543
No 312
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=20.82 E-value=48 Score=30.71 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=24.7
Q ss_pred cccHHHHHHHHHHhhccCceEEEEEecC
Q 036911 187 GRDFTLFLTSRSEEILSGGHVLLSIIGN 214 (359)
Q Consensus 187 ~~d~~~fL~~Ra~EL~pGG~l~~~~~g~ 214 (359)
...+..+|..-..-|+|||+|++..+-.
T Consensus 209 L~~L~~~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 209 LNALKEFLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCc
Confidence 7889999999899999999999888744
No 313
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=20.12 E-value=64 Score=28.67 Aligned_cols=20 Identities=15% Similarity=-0.006 Sum_probs=15.5
Q ss_pred CcceEEeecCCCCcchHHHH
Q 036911 50 ECLKIADLGCSSGPNTLSLL 69 (359)
Q Consensus 50 ~~~~IaDlGCs~G~nt~~l~ 69 (359)
..-.|+|..||+|..++...
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~ 231 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAK 231 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHH
Confidence 34689999999998666543
Done!