Query 036912
Match_columns 445
No_of_seqs 132 out of 668
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 10:50:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036912.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036912hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eg3a2 a.39.1.7 (A:210-306) D 30.2 31 0.0022 25.8 4.6 57 87-143 3-78 (97)
2 d1v54g_ f.23.2.1 (G:) Mitochon 15.6 45 0.0033 24.2 2.7 23 416-438 14-36 (84)
3 d1v8ca2 d.129.5.1 (A:88-165) M 13.9 38 0.0027 23.4 1.7 12 297-308 49-60 (78)
4 d1xmec1 f.23.9.1 (C:2-34) Bact 13.4 70 0.0051 18.4 2.5 16 427-442 11-26 (33)
5 d2i4ra1 c.149.1.1 (A:4-79) V-t 12.1 37 0.0027 23.9 1.3 24 50-73 53-76 (76)
6 d2outa1 a.140.3.2 (A:94-131) U 12.1 33 0.0024 20.3 0.8 16 272-287 6-21 (38)
7 d1ctda_ a.39.1.5 (A:) Troponin 10.8 74 0.0054 18.7 2.1 17 363-379 2-18 (34)
8 d1f16a_ f.1.4.1 (A:) Proapopto 10.8 1.9E+02 0.014 23.6 5.8 39 386-425 132-177 (192)
9 d1wpga4 f.33.1.1 (A:1-124,A:24 8.5 1E+02 0.0073 28.8 3.4 25 409-433 401-425 (472)
10 d1y74a1 a.194.1.1 (A:17-73) Li 7.8 2.4E+02 0.017 18.4 4.0 24 88-121 26-49 (57)
No 1
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.19 E-value=31 Score=25.83 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhhhc-cCCCcHHHHHHHHH---------------HHHHHHHhcccc---cCCCChHHHHHHHHH
Q 036912 87 EHKWRYLGSLLNRLKN-TKSLGLEDFLKAVE---------------SLEIKARECFSE---TIHLGTDEFVELLVL 143 (445)
Q Consensus 87 ~~K~~~l~~~l~r~~~-~~~~~l~~~~~~i~---------------~~e~~aR~~Y~~---~~~~~~~ef~~Mlll 143 (445)
+.|.||+=..+....+ .....++.+++.+- .+|..+|+|+.. .-+.+.++|++-|..
T Consensus 3 ~dKyRYlF~qisd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~~~~~~i~~~~FL~wl~~ 78 (97)
T d1eg3a2 3 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL 78 (97)
T ss_dssp HHHHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhccCCCCcccHHHHHHHHHh
Confidence 3599999999987321 11124555555542 247888888842 234777777776653
No 2
>d1v54g_ f.23.2.1 (G:) Mitochondrial cytochrome c oxidase subunit VIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=15.65 E-value=45 Score=24.20 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=19.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 036912 416 SPWSFISALAALILLLLTVAQTV 438 (445)
Q Consensus 416 nPW~~~s~~aA~ill~lT~lQTv 438 (445)
+-|.-+|+++|+-.++++.+.++
T Consensus 14 ~lWkkis~~va~P~i~l~~~n~~ 36 (84)
T d1v54g_ 14 RTWRFLTFGLALPSVALCTLNSW 36 (84)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45889999999888888888875
No 3
>d1v8ca2 d.129.5.1 (A:88-165) MoaD-related protein, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=13.86 E-value=38 Score=23.35 Aligned_cols=12 Identities=17% Similarity=0.731 Sum_probs=10.3
Q ss_pred cEEEeccEEecC
Q 036912 297 GAIEMPTITIDD 308 (445)
Q Consensus 297 G~L~IP~L~id~ 308 (445)
|.|+||+|.|.-
T Consensus 49 gsl~ip~lrvev 60 (78)
T d1v8ca2 49 GSLSIPQLRVEV 60 (78)
T ss_dssp TTEEEEEEEEEE
T ss_pred cceecceEEEEe
Confidence 889999998764
No 4
>d1xmec1 f.23.9.1 (C:2-34) Bacterial ba3 type cytochrome c oxidase subunit IIa {Thermus thermophilus [TaxId: 274]}
Probab=13.39 E-value=70 Score=18.42 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHhh
Q 036912 427 LILLLLTVAQTVFTVY 442 (445)
Q Consensus 427 ~ill~lT~lQTv~sv~ 442 (445)
+.+|.+|++-.++.|+
T Consensus 11 i~il~l~ilvfw~gv~ 26 (33)
T d1xmec1 11 ILVLTLTILVFWLGVY 26 (33)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344455554444444
No 5
>d2i4ra1 c.149.1.1 (A:4-79) V-type ATP synthase subunit F, AtpF {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=12.14 E-value=37 Score=23.92 Aligned_cols=24 Identities=25% Similarity=0.454 Sum_probs=20.0
Q ss_pred eeecCccccccCCCCCcccEEEeC
Q 036912 50 IFRLPQSFININGKSYQPHIVSIG 73 (445)
Q Consensus 50 I~rVP~~lr~~n~~aY~P~~VSIG 73 (445)
.-++|+.+++.-.+.-.|.++.||
T Consensus 53 a~~i~~~i~~~~~~~~~P~Vi~Ig 76 (76)
T d2i4ra1 53 LKKLPPVLRREIDEKVEPTFVSVG 76 (76)
T ss_dssp STTSCHHHHTTTTTCCSSEEEEEC
T ss_pred HHHhhHHHHHHHhcCCCCEEEecC
Confidence 346788888877888999999998
No 6
>d2outa1 a.140.3.2 (A:94-131) Uncharacterized protein HI1507 in Mu-like prophage FluMu region {Haemophilus influenzae [TaxId: 727]}
Probab=12.10 E-value=33 Score=20.33 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=12.6
Q ss_pred HHHHHhCcEEeecCCC
Q 036912 272 SKLRRAGIKLNAVKAE 287 (445)
Q Consensus 272 teL~~aGV~Fk~~~~~ 287 (445)
.+|-+.||+||.+.+.
T Consensus 6 aqltergitfkqsatk 21 (38)
T d2outa1 6 AQLTERGITFKQSATK 21 (38)
T ss_dssp HHHHHHTCCCSSSCCS
T ss_pred HHHHHcCceeeccchh
Confidence 4788999999987543
No 7
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=10.78 E-value=74 Score=18.69 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=14.5
Q ss_pred ChHHHHHHHHHhccCcc
Q 036912 363 TDAEVALFINNLGKDVA 379 (445)
Q Consensus 363 sdeeva~lF~~L~~~~~ 379 (445)
|.||+|++|+-.-|+..
T Consensus 2 sEeELae~FRifDkNaD 18 (34)
T d1ctda_ 2 SEEELANAFRIFDKNAD 18 (34)
T ss_dssp HHHHHHHHHHTTCCSSS
T ss_pred CHHHHHHHHHHHccCCc
Confidence 57899999999888764
No 8
>d1f16a_ f.1.4.1 (A:) Proapoptotic molecule Bax {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.77 E-value=1.9e+02 Score=23.60 Aligned_cols=39 Identities=13% Similarity=0.365 Sum_probs=18.0
Q ss_pred cHHHHHHHHHHHhcCchHHHHH------Hhccccccch-HHHHHHHH
Q 036912 386 YLSKLFNDVHDYYSSSRHVQWA------AFKYKYFDSP-WSFISALA 425 (445)
Q Consensus 386 y~~~v~~~l~~y~~~rw~~w~a------~l~~~yf~nP-W~~~s~~a 425 (445)
+...+++-+-+|-..+-..|+. .+ .+||++| |..+++.+
T Consensus 132 ~v~~i~~~~~~fl~~~l~~WI~~~GGW~g~-~~~f~~~~w~~~~~~~ 177 (192)
T d1f16a_ 132 LIRTIMGWTLDFLRERLLGWIQDQGGWDGL-LSYFGTPTWQTVTIFV 177 (192)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHTCSTHHH-HHHCCCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHCCCHHHH-HHHcCCCchHHHHHHH
Confidence 4555555555554443333331 22 3456555 55554433
No 9
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=8.45 E-value=1e+02 Score=28.75 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=18.5
Q ss_pred hccccccchHHHHHHHHHHHHHHHH
Q 036912 409 FKYKYFDSPWSFISALAALILLLLT 433 (445)
Q Consensus 409 l~~~yf~nPW~~~s~~aA~ill~lT 433 (445)
+++..|+|+|.+++++.++++.++.
T Consensus 401 ~~~~~~~N~~l~~av~i~~~l~~~i 425 (472)
T d1wpga4 401 MRMPPWVNIWLLGSICLSMSLHFLI 425 (472)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHHHHH
T ss_pred hhcCccccHHHHHHHHHHHHHHHHH
Confidence 4567789999999998876654443
No 10
>d1y74a1 a.194.1.1 (A:17-73) Lin-7 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.83 E-value=2.4e+02 Score=18.42 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHH
Q 036912 88 HKWRYLGSLLNRLKNTKSLGLEDFLKAVESLEIK 121 (445)
Q Consensus 88 ~K~~~l~~~l~r~~~~~~~~l~~~~~~i~~~e~~ 121 (445)
.|+..++..|+. +|..+|+++-+.
T Consensus 26 ~KL~aLqkVLqS----------dF~~avREVYeh 49 (57)
T d1y74a1 26 QKLQALQRVLQS----------RFCSAIREVYEQ 49 (57)
T ss_dssp HHHHHHHHHHHS----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----------HHHHHHHHHHHH
Confidence 467777777666 677777765443
Done!