Query         036916
Match_columns 538
No_of_seqs    174 out of 1943
Neff          11.2
Searched_HMMs 29240
Date          Mon Mar 25 10:54:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036916.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036916hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3tbg_A Cytochrome P450 2D6; mo 100.0 7.4E-78 2.5E-82  603.8  41.6  464   38-533     7-477 (479)
  2 3swz_A Steroid 17-alpha-hydrox 100.0   6E-77 2.1E-81  598.7  43.2  465   39-532     6-479 (494)
  3 3pm0_A Cypib1, cytochrome P450 100.0 9.9E-77 3.4E-81  599.8  38.1  469   37-534     5-486 (507)
  4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.1E-75 7.3E-80  585.3  43.4  461   37-533     6-473 (476)
  5 2fdv_A Cytochrome P450 2A6; CY 100.0 3.1E-75 1.1E-79  582.8  41.8  460   39-533     8-474 (476)
  6 1po5_A Cytochrome P450 2B4; ox 100.0 3.3E-75 1.1E-79  582.7  41.8  460   39-533     8-474 (476)
  7 1r9o_A Cytochrome P450 2C9; mo 100.0 7.6E-75 2.6E-79  580.4  40.9  462   37-533     7-475 (477)
  8 3czh_A Cytochrome P450 2R1; vi 100.0 8.7E-75   3E-79  579.7  41.1  464   39-534    10-478 (481)
  9 2hi4_A Cytochrome P450 1A2; CY 100.0 3.6E-75 1.2E-79  585.0  37.2  460   42-532    17-488 (495)
 10 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.2E-74 4.1E-79  581.0  40.9  454   38-531    21-482 (482)
 11 3nxu_A Cytochrome P450 3A4; al 100.0 8.1E-76 2.8E-80  589.6  31.3  455   41-534    14-477 (485)
 12 3qz1_A Steroid 21-hydroxylase; 100.0   1E-75 3.5E-80  590.5  31.2  450   38-533    26-485 (496)
 13 3s79_A Cytochrome P450 19A1; o 100.0 4.7E-74 1.6E-78  579.4  39.4  452   39-535    43-499 (503)
 14 3ld6_A Lanosterol 14-alpha dem 100.0 7.3E-74 2.5E-78  570.5  30.6  440   42-534    12-456 (461)
 15 3n9y_A Cholesterol SIDE-chain  100.0 2.2E-72 7.6E-77  564.9  35.0  465   38-533     6-476 (487)
 16 2ve3_A Putative cytochrome P45 100.0   2E-71 6.8E-76  549.6  37.6  433   39-531    10-443 (444)
 17 2ij2_A Cytochrome P450 BM3; mo 100.0 3.6E-70 1.2E-74  544.3  36.1  447   42-534     4-454 (470)
 18 3mdm_A Cholesterol 24-hydroxyl 100.0 7.7E-70 2.6E-74  541.5  38.2  430   63-534    10-444 (456)
 19 2cib_A Cytochrome P450 51; hem 100.0 5.6E-70 1.9E-74  540.9  34.4  443   41-534     4-451 (455)
 20 3gw9_A Sterol 14alpha-demethyl 100.0 1.3E-69 4.3E-74  539.6  36.0  440   41-532     3-450 (450)
 21 3dbg_A Putative cytochrome P45 100.0 1.2E-69 4.1E-74  541.1  27.0  437   40-533    22-463 (467)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 2.6E-68 9.1E-73  531.0  32.3  444   38-533     8-456 (461)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 1.4E-66 4.7E-71  523.4  28.9  453   38-533    10-487 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 1.1E-66 3.6E-71  523.5  25.5  456   37-533     9-487 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 3.9E-64 1.3E-68  506.0  36.3  452   39-534    16-492 (498)
 26 2cd8_A Cytochrome P450 monooxy 100.0 4.5E-63 1.5E-67  486.5  34.8  398   40-533    25-430 (436)
 27 3b98_A Prostaglandin I2 syntha 100.0 4.3E-63 1.5E-67  495.8  30.3  440   39-533    16-472 (475)
 28 1izo_A P450bsbeta, cytochrome  100.0 8.1E-62 2.8E-66  476.7  36.5  401   49-533     8-417 (417)
 29 1ued_A P450 OXYC, P450 monooxy 100.0   3E-61   1E-65  469.7  36.0  386   39-528     8-406 (406)
 30 1jfb_A Nitric-oxide reductase  100.0 1.1E-60 3.6E-65  466.8  38.3  374   42-502     2-382 (404)
 31 3awm_A Fatty acid alpha-hydrox 100.0 2.3E-60 7.7E-65  466.2  34.7  401   43-531     4-413 (415)
 32 1n97_A CYP175A1; electron tran 100.0 1.5E-61 5.1E-66  469.7  23.6  382   46-532     4-387 (389)
 33 1cpt_A Cytochrome P450-TERP; o 100.0 1.9E-60 6.5E-65  467.8  29.1  407   39-531     4-428 (428)
 34 2zbx_A Cytochrome P450-SU1; be 100.0 5.5E-59 1.9E-63  454.7  37.1  369   41-502     5-384 (412)
 35 3aba_A Cytochrome P450; oxidor 100.0 3.4E-59 1.2E-63  454.8  34.7  376   63-532    19-403 (403)
 36 3ejb_B Biotin biosynthesis cyt 100.0 3.9E-59 1.3E-63  455.7  33.2  385   63-538    13-403 (404)
 37 1odo_A Putative cytochrome P45 100.0 7.8E-59 2.7E-63  453.3  33.7  379   63-530    15-407 (408)
 38 3a4g_A Vitamin D hydroxylase;  100.0 1.3E-58 4.6E-63  451.1  35.0  379   63-536    20-406 (411)
 39 1s1f_A Putative cytochrome P45 100.0   2E-58 6.8E-63  449.8  36.0  388   41-529     8-405 (406)
 40 3abb_A CYP105D6, cytochrome P4 100.0 3.7E-59 1.3E-63  455.6  28.6  374   63-531    24-407 (408)
 41 2zwu_A Camphor 5-monooxygenase 100.0   4E-59 1.4E-63  455.0  28.4  397   37-533     7-412 (415)
 42 2jjn_A Cytochrome P450 113A1;  100.0 5.3E-59 1.8E-63  454.9  29.2  379   63-534    28-409 (411)
 43 1gwi_A CYP154C1, cytochrome P4 100.0 4.7E-59 1.6E-63  454.6  28.3  379   63-533    17-411 (411)
 44 4fb2_A P450CIN; heme, monooxyg 100.0 8.1E-59 2.8E-63  452.0  29.4  371   63-532    19-394 (398)
 45 3tyw_A Putative cytochrome P45 100.0 9.3E-58 3.2E-62  447.0  35.3  352   63-502    29-389 (417)
 46 1q5d_A P450 epoxidase; cytochr 100.0 3.7E-58 1.2E-62  449.9  32.4  380   63-532    26-417 (419)
 47 2y5n_A MYCG, P-450-like protei 100.0 9.6E-58 3.3E-62  445.5  35.2  373   63-527    37-416 (417)
 48 2dkk_A Cytochrome P450; CYP158 100.0   5E-58 1.7E-62  446.7  32.6  374   63-531    27-410 (411)
 49 2z3t_A Cytochrome P450; monoxy 100.0 7.4E-58 2.5E-62  447.9  31.5  379   63-531    20-416 (425)
 50 3dsk_A Cytochrome P450 74A, ch 100.0 1.4E-59 4.8E-64  472.5  19.5  419   37-502    24-472 (495)
 51 2xkr_A CYP142, putative cytoch 100.0 1.4E-57 4.7E-62  443.3  32.7  374   63-532    18-395 (398)
 52 2uuq_A CYP130, cytochrome P450 100.0 5.8E-58   2E-62  447.0  30.1  386   51-531    11-413 (414)
 53 3ivy_A Cytochrome P450 CYP125; 100.0 4.5E-58 1.5E-62  450.9  28.8  393   41-533    18-430 (433)
 54 3buj_A CALO2; heme, iron, meta 100.0 1.5E-57 5.2E-62  442.9  32.2  376   63-532    13-397 (397)
 55 2xbk_A PIMD protein; epoxidati 100.0 7.8E-57 2.7E-61  436.9  36.5  365   63-527    26-403 (404)
 56 2wm5_A CYP124, putative cytoch 100.0 6.1E-57 2.1E-61  442.4  35.0  376   64-528    45-434 (435)
 57 2z36_A MOXA, cytochrome P450 t 100.0 9.4E-57 3.2E-61  438.4  35.6  375   63-529    22-408 (413)
 58 1z8o_A 6-deoxyerythronolide B  100.0 3.1E-57 1.1E-61  441.4  31.9  373   63-528    14-402 (404)
 59 3oft_A Cytochrome P450, CYP101 100.0 1.2E-57   4E-62  444.0  28.8  349   63-502    24-374 (396)
 60 3nc3_A Cytochrome P450 CYPX; c 100.0 4.6E-58 1.6E-62  451.2  25.5  386   63-530    53-440 (441)
 61 3tkt_A Cytochrome P450; aromat 100.0 2.6E-57   9E-62  447.4  30.7  384   65-530    47-449 (450)
 62 3lxh_A Cytochrome P450; heme,  100.0 3.4E-57 1.1E-61  443.7  29.1  378   63-533    38-419 (421)
 63 3oo3_A OXY protein; cytochrome 100.0 3.2E-56 1.1E-60  432.0  35.3  345   63-502    12-361 (384)
 64 3r9b_A Cytochrome P450 164A2;  100.0   5E-57 1.7E-61  442.9  29.8  380   63-531    29-417 (418)
 65 3mgx_A Putative P450 monooxyge 100.0   3E-57   1E-61  441.4  26.6  372   63-531    37-415 (415)
 66 1lfk_A OXYB, P450 monooxygenas 100.0 8.1E-57 2.8E-61  437.6  29.7  344   68-502    18-376 (398)
 67 3dan_A Cytochrome P450 74A2; A 100.0 3.4E-57 1.2E-61  452.8  26.7  418   38-502     6-454 (473)
 68 1n40_A P450 MT2, cytochrome P4 100.0 1.8E-56 6.3E-61  434.5  28.7  371   63-528    16-396 (396)
 69 3rwl_A Cytochrome P450 alkane  100.0 2.3E-55 7.8E-60  430.0  33.4  378   63-530    38-426 (426)
 70 2wiy_A XPLA-heme, cytochrome P 100.0 2.3E-54 7.9E-59  419.1  30.6  352   64-502    21-374 (394)
 71 3p3o_A Cytochrome P450; monoox 100.0 9.2E-55 3.2E-59  425.1  26.8  377   63-530    33-415 (416)
 72 1io7_A Cytochrome P450 CYP119; 100.0 3.6E-54 1.2E-58  414.4  25.7  356   66-532     2-368 (368)
 73 2rfb_A Cytochrome P450; heme,  100.0 5.6E-54 1.9E-58  408.9  23.4  319   74-502     2-324 (343)
 74 3b4x_A 367AA long hypothetical 100.0   2E-53   7E-58  408.4  24.8  353   66-530     2-366 (367)
 75 4dnj_A Putative cytochrome P45 100.0 1.9E-52 6.5E-57  407.5  28.1  386   47-530    18-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 9.9E-48 3.4E-52  373.2  30.1  374   63-528    37-413 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.1E-45 3.8E-50  350.2   2.9  315   42-502    35-361 (381)
 78 3lqv_A PRE-mRNA branch site pr  36.8 1.2E+02   0.004   21.9   7.3   58   42-104     3-66  (115)
 79 2krb_A Eukaryotic translation   34.8   1E+02  0.0034   20.5   6.5   39   66-104    21-66  (81)
 80 1m46_B IQ4, IQ4 motif from MYO  33.3      34  0.0012   16.4   2.0   12  354-365     8-19  (26)
 81 2diu_A KIAA0430 protein; struc  32.8      77  0.0026   22.5   4.7   62   50-113    12-75  (96)
 82 1s79_A Lupus LA protein; RRM,   31.0 1.1E+02  0.0037   21.8   5.6   54   51-109    15-76  (103)
 83 4f25_A Polyadenylate-binding p  30.5      77  0.0026   23.1   4.9   50   50-104     8-64  (115)
 84 3d2w_A TAR DNA-binding protein  30.2      97  0.0033   21.2   5.1   51   46-101    10-64  (89)
 85 1iqt_A AUF1, heterogeneous nuc  25.7   1E+02  0.0035   19.9   4.4   44   66-109    13-65  (75)
 86 2nlw_A Eukaryotic translation   24.2 1.9E+02  0.0065   20.4   6.1   53   49-104    17-80  (105)
 87 3beg_B Splicing factor, argini  23.6 1.8E+02  0.0062   21.0   5.9   57   50-111    19-78  (115)
 88 2mss_A Protein (musashi1); RNA  21.7 1.4E+02  0.0049   19.1   4.6   44   66-109    13-65  (75)
 89 2pe8_A Splicing factor 45; RRM  21.3 1.4E+02  0.0048   21.3   4.6   68   45-112     6-84  (105)
 90 1x4c_A Splicing factor, argini  20.2 2.4E+02  0.0081   20.0   6.8   50   50-104    18-69  (108)

No 1  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=7.4e-78  Score=603.83  Aligned_cols=464  Identities=24%  Similarity=0.405  Sum_probs=355.3

Q ss_pred             CCCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccccc
Q 036916           38 DKKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALA  117 (538)
Q Consensus        38 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~  117 (538)
                      +..++||||+++|++||++.+..  .+.+..+.+|+++||+||++++|+.++|+|+||++++++|.+++..|++|+....
T Consensus         7 s~~kLPPGP~~lP~iGn~~~~~~--~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~   84 (479)
T 3tbg_A            7 SKGKLPPGPLPLPGLGNLLHVDF--QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPI   84 (479)
T ss_dssp             --CCCCCCSCCBTTTBTGGGCCT--TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGG
T ss_pred             CCCCCCCCCCCcCcccchHhhcC--CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHH
Confidence            34468999999999999998864  5678889999999999999999999999999999999999998888988877665


Q ss_pred             chhhccC--CCceEeccCchhHHHHHhhhhhhcCCHHHHHh--cHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH
Q 036916          118 PEILGYN--YAMFGFSPYGPYWRQIRKIATLEILSNHRLEM--LKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI  193 (538)
Q Consensus       118 ~~~~~~~--~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~  193 (538)
                      ...++.+  ..++++..+|+.|+++|+++. +.|+...+..  +...+......+...+.       ...+. .+|+.++
T Consensus        85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~-~~~~~~~  155 (479)
T 3tbg_A           85 TQILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFA-------NHSGR-PFRPNGL  155 (479)
T ss_dssp             GGGGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHH-------TTTTC-CBCTHHH
T ss_pred             HHHhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHH-------hccCC-cccHHHH
Confidence            5554433  234557778999999999998 5665544432  34444444444444332       23344 7999999


Q ss_pred             HHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccc--ccccccccccccccccchHHHHHHHHHH
Q 036916          194 FNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAF--AIADSVPFLRWLDLDGIEKSMKRTAKEL  271 (538)
Q Consensus       194 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~  271 (538)
                      +..+++++++.++||.++ +..       +.......+............  ......|+..++  .....+.....+..
T Consensus       156 ~~~~~~~~~~~~~fg~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  225 (479)
T 3tbg_A          156 LDKAVSNVIASLTCGRRF-EYD-------DPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAF  225 (479)
T ss_dssp             HHHHHHHHHHHHHHSCCC-CTT-------CHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCcc-ccc-------chhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHH
Confidence            999999999999999998 433       333334444443333322211  111222333332  12234444555666


Q ss_pred             HHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 036916          272 DQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTL  350 (538)
Q Consensus       272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  350 (538)
                      .+.+.+.++.........     ....|.++.++..........+... ++++.+++.++++||+|||+++++|++++|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~-----~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~  300 (479)
T 3tbg_A          226 LTQLDELLTEHRMTWDPA-----QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMI  300 (479)
T ss_dssp             HHHHHHHHHHHHHHCCTT-----SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcc-----cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhc
Confidence            666777776666544332     3445677666653333222233334 8899999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchh
Q 036916          351 NHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKI  430 (538)
Q Consensus       351 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  430 (538)
                      +||++|+|+++||+.+++.++.++.+++.+|||++|||+||||++|+++...+|.+.+|++++||.|||||.|.++.+++
T Consensus       301 ~~P~~q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~  380 (479)
T 3tbg_A          301 LHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSV  380 (479)
T ss_dssp             HCHHHHHHHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhh
Confidence            99999999999999999998999999999999999999999999999999878888899999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCc
Q 036916          431 HRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDL  510 (538)
Q Consensus       431 ~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  510 (538)
                      ||||++|+||++|+||||+++++.   ...+..|+|||+|+|.|+|++||++|+++++|+||++|||+++++.  ..++.
T Consensus       381 h~d~~~~~dP~~F~PeRfl~~~~~---~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~  455 (479)
T 3tbg_A          381 LKDEAVWEKPFRFHPEHFLDAQGH---FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ--PRPSH  455 (479)
T ss_dssp             HTCTTTSSSTTSCCGGGGBCTTCC---BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTS--CCCCS
T ss_pred             cCChhhCCCccccCccccCCCCcc---cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCC--CCccc
Confidence            999999999999999999987532   2356789999999999999999999999999999999999998752  22344


Q ss_pred             cCccCccccccccceeeeccCCC
Q 036916          511 SEGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ....+++..| .+++|++++|++
T Consensus       456 ~~~~~~~~~P-~~~~v~~~pRs~  477 (479)
T 3tbg_A          456 HGVFAFLVSP-SPYELCAVPRHH  477 (479)
T ss_dssp             CEEESSSEEE-CCCCBEEEEC--
T ss_pred             cccceeeecC-CCeEEEEEECCC
Confidence            4455666665 689999999986


No 2  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=6e-77  Score=598.67  Aligned_cols=465  Identities=26%  Similarity=0.406  Sum_probs=373.1

Q ss_pred             CCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      ..+.||||+++|++||++.+... ...+..+.+|+++||+||++++|+.++|+|+||+++++++.+++..|++++.....
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~~-~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~   84 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPRH-GHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL   84 (494)
T ss_dssp             ------CCBCCCEEEEESSCTTS-SCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred             CCCCCCCCCCCCeEcchHHhCCC-CchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence            44579999999999999988531 35688899999999999999999999999999999999999998899888775555


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCH--HHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSN--HRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA  196 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~--~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~  196 (538)
                      ..++.++.++++..+|+.|+++|++++ +.|+.  ..+..+.+.+.++++.+++.+.+.       ++. ++|+..++..
T Consensus        85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~-~vd~~~~~~~  155 (494)
T 3swz_A           85 DIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATH-------NGQ-SIDISFPVFV  155 (494)
T ss_dssp             HHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT-------TTE-EECCHHHHHH
T ss_pred             HHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHc-------CCC-cccHHHHHHH
Confidence            555554555666778999999999998 66653  345678899999999988877542       345 8999999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHH
Q 036916          197 LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILE  276 (538)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  276 (538)
                      +++|+|+.++||.++ +..       ++....+.+....+........+.+.+|++++++.. ..+.+++..+.+.+++.
T Consensus       156 ~t~dvi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~-~~~~~~~~~~~~~~~~~  226 (494)
T 3swz_A          156 AVTNVISLICFNTSY-KNG-------DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNK-TLEKLKSHVKIRNDLLN  226 (494)
T ss_dssp             HHHHHHHHHHHSCCC-CTT-------CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCS-HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCcC-CCC-------CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcH-HHHHHHHHHHHHHHHHH
Confidence            999999999999988 332       233333444444445554445567778888877532 34566677777888888


Q ss_pred             HHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccC------CCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 036916          277 GWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEE------LPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLT  349 (538)
Q Consensus       277 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L  349 (538)
                      ..++++++....      +...|+++.|++...+.+.      ..+... ++++..++.++++||+|||+++++|++++|
T Consensus       227 ~~i~~~~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L  300 (494)
T 3swz_A          227 KILENYKEKFRS------DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFL  300 (494)
T ss_dssp             HHHHHHTTTCCT------TCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcc------cchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence            888877654322      3456999999984432211      011123 778899999999999999999999999999


Q ss_pred             HhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecch
Q 036916          350 LNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAK  429 (538)
Q Consensus       350 ~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~  429 (538)
                      ++||++|+|+++||+++++.++.++++++.+|||++|||+|+||++|+++..++|.+++|++++||.|||||.|+++.++
T Consensus       301 ~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~  380 (494)
T 3swz_A          301 LHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWA  380 (494)
T ss_dssp             HHCHHHHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHH
T ss_pred             HhCHHHHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHH
Confidence            99999999999999999998889999999999999999999999999999878999999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCC
Q 036916          430 IHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLD  509 (538)
Q Consensus       430 ~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~  509 (538)
                      +||||++|+||++|+||||+++.+.. ...+...++|||+|+|.|+|++||++|++++++.||++|+|++++++  ..+.
T Consensus       381 ~~~d~~~~~dp~~F~PeRfl~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~  457 (494)
T 3swz_A          381 LHHNEKEWHQPDQFMPERFLNPAGTQ-LISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDG--QLPS  457 (494)
T ss_dssp             HHHCTTTSSSTTSCCGGGGBCTTSSS-BCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSC--CCCC
T ss_pred             hhCCcccCCCcccCCcccccCCCCcc-ccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCC--CCCC
Confidence            99999999999999999999765321 11245689999999999999999999999999999999999998753  2234


Q ss_pred             ccCccCccccccccceeeeccCC
Q 036916          510 LSEGVGLTNLKATPLQVLLTPRL  532 (538)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~~r~  532 (538)
                      .....+++.. +.+++|++++|+
T Consensus       458 ~~~~~~~~~~-p~~~~v~~~~R~  479 (494)
T 3swz_A          458 LEGIPKVVFL-IDSFKVKIKVRQ  479 (494)
T ss_dssp             CSCEESSSEE-CCCCCEEEEECH
T ss_pred             CCCccceeec-CCCcEEEEEEcC
Confidence            4444455555 478999999994


No 3  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=9.9e-77  Score=599.83  Aligned_cols=469  Identities=24%  Similarity=0.384  Sum_probs=356.8

Q ss_pred             CCCCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc
Q 036916           37 TDKKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL  116 (538)
Q Consensus        37 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~  116 (538)
                      +++.+.||||+++|++||++.+.   .+++..+.+|+++||+||++++|+.++|+|+||++++++|.++...|++++...
T Consensus         5 ~~~~~~pPgP~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~   81 (507)
T 3pm0_A            5 TSSKGKPPGPFAWPLIGNAAAVG---QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFA   81 (507)
T ss_dssp             --------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCH
T ss_pred             cCCCCCCcCCCCCCeeCchhhcC---ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcch
Confidence            34556899999999999999886   577899999999999999999999999999999999999988878888776544


Q ss_pred             cchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHH------HHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccH
Q 036916          117 APEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHR------LEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEM  190 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~------l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl  190 (538)
                      ...... .+.+++++.+|+.|+++|++++ +.|+...      ...+.+.+.++++.+++.+.+.     ..++. ++|+
T Consensus        82 ~~~~~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~-~vd~  153 (507)
T 3pm0_A           82 SFRVVS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRG-----SADGA-FLDP  153 (507)
T ss_dssp             HHHHGG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHT-----TGGGC-CBCC
T ss_pred             HHHhhc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhh-----cccCC-CcCh
Confidence            333332 2234456778999999999997 5544322      2348899999999999988764     33455 8999


Q ss_pred             HHHHHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccc--cchHHHHHHH
Q 036916          191 KEIFNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLD--GIEKSMKRTA  268 (538)
Q Consensus       191 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~--~~~~~~~~~~  268 (538)
                      .+++..+++|+++.++||.++ +..       ++....+.+.+..+........+...+|++++++.+  ...+...+..
T Consensus       154 ~~~~~~~~~dvi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~  225 (507)
T 3pm0_A          154 RPLTVVAVANVMSAVCFGCRY-SHD-------DPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLN  225 (507)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCC-CTT-------CHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHccccC-CCC-------CHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHH
Confidence            999999999999999999998 432       344445555555555555444566677888777532  1346667777


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCC----CCCh-hhHHHHHHHHHHHhccchhHHHHH
Q 036916          269 KELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELP----SFDA-DTITKATCLALILGGTDTTTFTLT  343 (538)
Q Consensus       269 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~----~~~~-~~~i~~~~~~~~~Ag~~tta~~l~  343 (538)
                      +.+.+++.+.++++++....+     +...|+++.+++.........    +... ++++.+++.++++||+|||+++++
T Consensus       226 ~~~~~~~~~~i~~~~~~~~~~-----~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~  300 (507)
T 3pm0_A          226 RNFSNFILDKFLRHCESLRPG-----AAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQ  300 (507)
T ss_dssp             HHHHHHHHHHHHHHHHHCCTT-----CCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccccc-----cCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHH
Confidence            888888888888877654331     245789999996332221101    1123 788999999999999999999999


Q ss_pred             HHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEE
Q 036916          344 WALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRL  423 (538)
Q Consensus       344 ~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v  423 (538)
                      |++++|++||++|+++++||+++++.++.++.+++.+|||++|||+|+||++|+++..++|++.+|++++||.|||||.|
T Consensus       301 ~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v  380 (507)
T 3pm0_A          301 WLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV  380 (507)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEE
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEE
Confidence            99999999999999999999999988888999999999999999999999999999877999999999999999999999


Q ss_pred             EEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCC
Q 036916          424 FVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPG  503 (538)
Q Consensus       424 ~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~  503 (538)
                      .++.+++||||++|+||++|+||||++.++... ...+..++|||+|+|.|+|++||++|++++++.||++|+|++.++.
T Consensus       381 ~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  459 (507)
T 3pm0_A          381 FVNQWSVNHDPLKWPNPENFDPARFLDKDGLIN-KDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE  459 (507)
T ss_dssp             EEBSHHHHSCTTTCSSSSSCCGGGGBCTTSCBC-HHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTC
T ss_pred             EeChHHHhCCcccCCCcCccCCCcccCCCCccc-CCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCC
Confidence            999999999999999999999999998653211 0123579999999999999999999999999999999999987642


Q ss_pred             CCCCCCccCccCccccccccceeeeccCCCC
Q 036916          504 DTEPLDLSEGVGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  534 (538)
                         +.++....+++..| .+++|++++|+.-
T Consensus       460 ---~~~~~~~~~~~~~p-~~~~v~~~~R~~~  486 (507)
T 3pm0_A          460 ---PAKMNFSYGLTIKP-KSFKVNVTLRESM  486 (507)
T ss_dssp             ---CSCCCEEESSSEEE-CSCCEEEEESSCC
T ss_pred             ---CCCCCCCCCccccC-CCcEEEEEEcccc
Confidence               23444444566655 5789999999753


No 4  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=2.1e-75  Score=585.32  Aligned_cols=461  Identities=23%  Similarity=0.371  Sum_probs=363.9

Q ss_pred             CCCCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc
Q 036916           37 TDKKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL  116 (538)
Q Consensus        37 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~  116 (538)
                      +++.+.||||+++|++||++.+..  .+++..+.+|+++||+||++++|+.++|+|+||++++++|.++...|++++...
T Consensus         6 ~~~~~lpPgP~~~PliG~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~   83 (476)
T 3e6i_A            6 SSKGKLPPGPFPLPIIGNLFQLEL--KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP   83 (476)
T ss_dssp             ----CCCCCCCCBTTTBTGGGCCT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred             cCCCCCCcCCCCcccccChhhhcc--ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence            345678999999999999999843  577899999999999999999999999999999999999998877787766543


Q ss_pred             cchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHH--HhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH
Q 036916          117 APEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRL--EMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF  194 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~  194 (538)
                      ....+..+  + ++..+|+.|+++|++.. +.+....+  ..+.+.+.++++.+++.+.+.       .++ ++|+.+++
T Consensus        84 ~~~~~~~~--~-l~~~~g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~-~~d~~~~~  151 (476)
T 3e6i_A           84 AFHAHRDR--G-IIFNNGPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKT-------QGQ-PFDPTFLI  151 (476)
T ss_dssp             GGGGGTTS--S-STTCCSTTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT-------TTS-CBCTHHHH
T ss_pred             hhheecCC--C-EEecCCcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHh-------CCC-CcChHHHH
Confidence            33222212  3 45667999999999876 55544332  335688888888888887532       345 79999999


Q ss_pred             HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcc--cccccccc-cccccccccchHHHHHHHHHH
Q 036916          195 NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGA--FAIADSVP-FLRWLDLDGIEKSMKRTAKEL  271 (538)
Q Consensus       195 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~  271 (538)
                      ..+++|+|+.++||.++ +..       ++....+.+.+...+.....  ..+...+| ++.+++  ...++..+..+.+
T Consensus       152 ~~~~~dvi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~  221 (476)
T 3e6i_A          152 GCAPCNVIADILFRKHF-DYN-------DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEV  221 (476)
T ss_dssp             THHHHHHHHHHHHSCCC-CTT-------CHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCC-CCC-------CHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHH
Confidence            99999999999999998 432       33444555555555444322  12334455 555553  2345667778888


Q ss_pred             HHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 036916          272 DQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTL  350 (538)
Q Consensus       272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  350 (538)
                      .+++.+.++++++....      +...|+++.++....+.....+... ++++.+++.++++||+|||+++++|++++|+
T Consensus       222 ~~~~~~~i~~~~~~~~~------~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~  295 (476)
T 3e6i_A          222 KEYVSERVKEHHQSLDP------NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILM  295 (476)
T ss_dssp             HHHHHHHHHHHHHTCCT------TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCC------CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence            89999999888765433      2356899999985443321122223 7889999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchh
Q 036916          351 NHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKI  430 (538)
Q Consensus       351 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  430 (538)
                      +||++|+++++||+++++.++.++++++.+|||++|||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++
T Consensus       296 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~  375 (476)
T 3e6i_A          296 KYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSV  375 (476)
T ss_dssp             HCHHHHHHHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHH
T ss_pred             cCHHHHHHHHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHh
Confidence            99999999999999999988889999999999999999999999999997779999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCc
Q 036916          431 HRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDL  510 (538)
Q Consensus       431 ~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  510 (538)
                      ||||++|+||++|+||||+++.+.   ...+..|+|||+|+|.|+|++||++|++++++.||++|++++..+.  ..+++
T Consensus       376 ~~d~~~~~~p~~F~PeR~l~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~  450 (476)
T 3e6i_A          376 LYDNQEFPDPEKFKPEHFLNENGK---FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP--KDIDL  450 (476)
T ss_dssp             HTCTTTSSSTTSCCGGGGBCTTSS---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCT--TTCCC
T ss_pred             hCCcccCCCccccCchhhcCCCCC---ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCC--CCCCC
Confidence            999999999999999999976532   1246789999999999999999999999999999999999986442  22344


Q ss_pred             cCc-cCccccccccceeeeccCCC
Q 036916          511 SEG-VGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       511 ~~~-~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ... .+++.. +.++++++++|++
T Consensus       451 ~~~~~~~~~~-p~~~~~~~~~R~~  473 (476)
T 3e6i_A          451 SPIHIGFGCI-PPRYKLCVIPRSH  473 (476)
T ss_dssp             SCSEESSSEE-CCCCCEEEEECC-
T ss_pred             CcccCccccC-CCCeEEEEEeccc
Confidence            332 455555 4789999999976


No 5  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=3.1e-75  Score=582.78  Aligned_cols=460  Identities=22%  Similarity=0.384  Sum_probs=363.5

Q ss_pred             CCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      ..+.||||+++|++||++.+..  .+++..+.+++++||+||++++++.++|+|+||++++++|.++...|++++.....
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~   85 (476)
T 2fdv_A            8 KGKLPPGPTPLPFIGNYLQLNT--EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATF   85 (476)
T ss_dssp             CCBCCCCCCCBTTTBTGGGCCT--TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHH
T ss_pred             cCCCCCCCCCCcccccHhhcCC--cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHH
Confidence            3457899999999999998842  56788999999999999999999989999999999999998766667665543222


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHH--HhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRL--EMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA  196 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~  196 (538)
                      ..... +.++ +..+|+.|+++|+++. +.|+...+  +.+.+.+.++++.+++.+.+.       +++ ++|+.+++..
T Consensus        86 ~~~~~-~~~l-~~~~g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~-~vd~~~~~~~  154 (476)
T 2fdv_A           86 DWVFK-GYGV-VFSNGERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGT-------GGA-NIDPTFFLSR  154 (476)
T ss_dssp             HHHHT-TCSS-SSCCHHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT-------TTC-CBCCHHHHHH
T ss_pred             hhhcC-CCCe-EecCchHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhc-------CCC-ccChHHHHHH
Confidence            21211 2233 4557999999999998 77876655  678999999999999988642       244 7999999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccc--cccccccc-ccccccccchHHHHHHHHHHHH
Q 036916          197 LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAF--AIADSVPF-LRWLDLDGIEKSMKRTAKELDQ  273 (538)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~  273 (538)
                      +++|+++.++||.++ +..       ++....+.+.+..++......  .+.+.+|+ +++++  ...++..+..+.+.+
T Consensus       155 ~~~~vi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~  224 (476)
T 2fdv_A          155 TVSNVISSIVFGDRF-DYK-------DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLED  224 (476)
T ss_dssp             HHHHHHHHHHHSSCC-CTT-------CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCcC-CCC-------CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHH
Confidence            999999999999998 332       233444555555544432211  12335565 44443  234566677888889


Q ss_pred             HHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhC
Q 036916          274 ILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNH  352 (538)
Q Consensus       274 ~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~  352 (538)
                      ++.+.++++++....      +...|+++.|++...+.....+... ++++.+++.++++||+|||+++++|++++|++|
T Consensus       225 ~~~~~i~~r~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~  298 (476)
T 2fdv_A          225 FIAKKVEHNQRTLDP------NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH  298 (476)
T ss_dssp             HHHHHHHHHHTTCCT------TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhcCC------CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhC
Confidence            999999887654322      2346999999984432211112233 888999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhcc
Q 036916          353 LDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHR  432 (538)
Q Consensus       353 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~  432 (538)
                      |++|+++++||+++++.++.++.+++.+|||++|||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||
T Consensus       299 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r  378 (476)
T 2fdv_A          299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLR  378 (476)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhC
Confidence            99999999999999988778999999999999999999999999999767999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccC
Q 036916          433 DPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSE  512 (538)
Q Consensus       433 d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  512 (538)
                      ||++|+||++|+||||++..+..   ..+..++|||+|+|.|+|++||++|++++++.||++|++++.++.  ..+++..
T Consensus       379 d~~~~~dp~~F~PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~  453 (476)
T 2fdv_A          379 DPSFFSNPQDFNPQHFLNEKGQF---KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSP--KDIDVSP  453 (476)
T ss_dssp             CTTTCSSTTSCCGGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCG--GGCCCSC
T ss_pred             ChhhcCCccccCchhhCCCCCCC---CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCC--CCCCccc
Confidence            99999999999999999754211   245689999999999999999999999999999999999987652  1123333


Q ss_pred             -ccCccccccccceeeeccCCC
Q 036916          513 -GVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       513 -~~~~~~~~~~~~~~~~~~r~~  533 (538)
                       ..+++..| .++.+++++|++
T Consensus       454 ~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 2fdv_A          454 KHVGFATIP-RNYTMSFLPRHH  474 (476)
T ss_dssp             SEESSSEEC-CCCCEEEEEC--
T ss_pred             cccceeecC-CceEEEEEeccc
Confidence             45666666 789999999964


No 6  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=3.3e-75  Score=582.65  Aligned_cols=460  Identities=25%  Similarity=0.415  Sum_probs=359.1

Q ss_pred             CCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      ..+.||||+++|++||++.+..  .+++..+.+++++||+||++++|+.+.|+|+||+.++++|.++...|++++.....
T Consensus         8 ~~~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~   85 (476)
T 1po5_A            8 KGKLPPGPSPLPVLGNLLQMDR--KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVV   85 (476)
T ss_dssp             -CCCCCCSCCBTTTBTGGGCCT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGG
T ss_pred             CCCCCcCCCCCCccccHHhccC--CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence            3457899999999999998832  56788999999999999999999889999999999999998776677765432222


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHH--HHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNH--RLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA  196 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~  196 (538)
                      ..... +.+ ++..+|+.|+++|+++. +.|+..  .++.+.+.+.++++.+++.+.+.       .++ ++|+.+++..
T Consensus        86 ~~~~~-~~~-l~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~-~~d~~~~~~~  154 (476)
T 1po5_A           86 DPIFQ-GYG-VIFANGERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKS-------KGA-LLDNTLLFHS  154 (476)
T ss_dssp             CSCCS-SCC-CCCSSHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT-------TTC-CBCCHHHHHH
T ss_pred             HhhcC-CCc-eEecCCcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhc-------CCC-ccCHHHHHHH
Confidence            11111 223 35558999999999987 677665  45678899999999999888652       244 7999999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccc--cccccccc-ccccccccchHHHHHHHHHHHH
Q 036916          197 LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAF--AIADSVPF-LRWLDLDGIEKSMKRTAKELDQ  273 (538)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~  273 (538)
                      +++|+++.++||.++ +..       ++....+.+.+...+......  .+...+|+ +++++  ...++..+..+.+.+
T Consensus       155 ~~~~vi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~  224 (476)
T 1po5_A          155 ITSNIICSIVFGKRF-DYK-------DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINT  224 (476)
T ss_dssp             HHHHHHHHHHHSSCC-CTT-------CHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CCC-------CHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHH
Confidence            999999999999988 332       223333333333332111100  12234554 33333  223566777888889


Q ss_pred             HHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhC
Q 036916          274 ILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNH  352 (538)
Q Consensus       274 ~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~  352 (538)
                      ++.+.++++++....      +...|+++.|+....+.....+... ++++.+++.++++||+|||+++++|++++|++|
T Consensus       225 ~~~~~i~~r~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~  298 (476)
T 1po5_A          225 FIGQSVEKHRATLDP------SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKY  298 (476)
T ss_dssp             HHHHHHHHHHTTCCT------TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhcCC------CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhC
Confidence            999999887764322      2346899999874432211112234 788999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhcc
Q 036916          353 LDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHR  432 (538)
Q Consensus       353 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~  432 (538)
                      |++|+++++||+++++.++.++.+++.+|||++|||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||
T Consensus       299 P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~r  378 (476)
T 1po5_A          299 PHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH  378 (476)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhc
Confidence            99999999999999988778999999999999999999999999999767999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccC
Q 036916          433 DPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSE  512 (538)
Q Consensus       433 d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  512 (538)
                      ||++|+||++|+||||+++.+..   ..+..++|||+|+|.|+|++||++|+++++++||++|++++.++.  +.++...
T Consensus       379 dp~~~~dp~~F~PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~  453 (476)
T 1po5_A          379 DPRYFETPNTFNPGHFLDANGAL---KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPP--EDIDLTP  453 (476)
T ss_dssp             CTTTCSSTTSCCGGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCG--GGCCCCC
T ss_pred             CccccCCccccCchhhCCCCCCc---cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCC--CCCCccC
Confidence            99999999999999999754221   135689999999999999999999999999999999999997652  1122333


Q ss_pred             -ccCccccccccceeeeccCCC
Q 036916          513 -GVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       513 -~~~~~~~~~~~~~~~~~~r~~  533 (538)
                       ..+++..| .++.+++++|++
T Consensus       454 ~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          454 RESGVGNVP-PSYQIRFLARHH  474 (476)
T ss_dssp             CSTTSSCCC-CCCCBEEEECC-
T ss_pred             CcCceeecC-cceEEEEEecCC
Confidence             44666666 799999999975


No 7  
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=7.6e-75  Score=580.45  Aligned_cols=462  Identities=22%  Similarity=0.356  Sum_probs=352.6

Q ss_pred             CCCCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc
Q 036916           37 TDKKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL  116 (538)
Q Consensus        37 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~  116 (538)
                      ++..+.||||+++|++|+++.+..  .+++..+.+++++||+||++++++.+.|+|+||++++++|.++...|++++...
T Consensus         7 ~~~~~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~   84 (477)
T 1r9o_A            7 SGRGKLPPGPTPLPVIGNILQIGI--KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFP   84 (477)
T ss_dssp             --CCBCCCCSSSCC-----CCBCH--HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCS
T ss_pred             cCCCCCCCCCCCCceeccHhhcCC--CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcch
Confidence            334468999999999999988732  567889999999999999999998899999999999999987766677655322


Q ss_pred             cchhhccCCCceEeccCchhHHHHHhhhhhhcCCHH--HHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH
Q 036916          117 APEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNH--RLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF  194 (538)
Q Consensus       117 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~  194 (538)
                      ....... +.+ ++..+|+.|+++|+++. +.|+..  .++.+.+.+.++++.+++.+.+.       .++ ++|+.+++
T Consensus        85 ~~~~~~~-~~~-l~~~~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~-~vd~~~~~  153 (477)
T 1r9o_A           85 LAERANR-GFG-IVFSNGKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKT-------KAS-PCDPTFIL  153 (477)
T ss_dssp             CCCTTTC-TTS-STTCCHHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT-------TTS-CBCTHHHH
T ss_pred             hhhhccC-CCc-eEecCChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhc-------CCC-ccChHHHH
Confidence            1111111 123 34558999999999987 667665  34567899999999999887542       244 79999999


Q ss_pred             HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcc--ccccccccc-ccccccccchHHHHHHHHHH
Q 036916          195 NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGA--FAIADSVPF-LRWLDLDGIEKSMKRTAKEL  271 (538)
Q Consensus       195 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~-l~~~~~~~~~~~~~~~~~~~  271 (538)
                      ..+++|+|+.++||.++ +..       ++....+.+.+...+.....  ..+...+|+ +++++  ...++..+..+.+
T Consensus       154 ~~~~~~vi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp--~~~~~~~~~~~~~  223 (477)
T 1r9o_A          154 GCAPCNVICSIIFHKRF-DYK-------DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFM  223 (477)
T ss_dssp             HHHHHHHHHHHHHSCCC-CTT-------CHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT--TCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCcC-CCC-------CHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc--hHHHHHHHHHHHH
Confidence            99999999999999998 332       23334444444444432211  123345665 33333  2235666777888


Q ss_pred             HHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 036916          272 DQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTL  350 (538)
Q Consensus       272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  350 (538)
                      .+++.+.++++++....      +...|+++.|+....+.....+... ++++.+++.++++||+|||+++++|++++|+
T Consensus       224 ~~~~~~~i~~r~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~  297 (477)
T 1r9o_A          224 KSYILEKVKEHQESMDM------NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLL  297 (477)
T ss_dssp             HHHHHHHHHHHHHTCCT------TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCC------CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHH
Confidence            89999999888764322      2346999999874432211112223 7889999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchh
Q 036916          351 NHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKI  430 (538)
Q Consensus       351 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  430 (538)
                      +||++|+++++||+++++.++.++.+++.+|||++|||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++
T Consensus       298 ~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~  377 (477)
T 1r9o_A          298 KHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSV  377 (477)
T ss_dssp             HCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHH
T ss_pred             hCHHHHHHHHHHHHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHh
Confidence            99999999999999999887889999999999999999999999999997679999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCc
Q 036916          431 HRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDL  510 (538)
Q Consensus       431 ~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  510 (538)
                      ||||++|+||++|+||||++..+..   ..+..++|||+|+|.|+|++||++|+++++++||++|++++.++.  +.++.
T Consensus       378 ~rd~~~~~dP~~F~PeR~l~~~~~~---~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~  452 (477)
T 1r9o_A          378 LHDNKEFPNPEMFDPHHFLDEGGNF---KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDP--KNLDT  452 (477)
T ss_dssp             HTCTTTSSSTTSCCGGGGBCTTSCB---CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCG--GGCCC
T ss_pred             hCCcccCCCccccCccceECCCCCc---CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCC--CCCCc
Confidence            9999999999999999999754211   135689999999999999999999999999999999999987652  11223


Q ss_pred             cC-ccCccccccccceeeeccCCC
Q 036916          511 SE-GVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       511 ~~-~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      .. ..+++..| .++.+++++|.+
T Consensus       453 ~~~~~~~~~~p-~~~~~~~~~R~~  475 (477)
T 1r9o_A          453 TPVVNGFASVP-PFYQLCFIPIHH  475 (477)
T ss_dssp             CCBCCSSSCBC-CCCCEEEEECCC
T ss_pred             cCCcCceeecC-CCeEEEEEEecc
Confidence            23 44556665 789999999975


No 8  
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=8.7e-75  Score=579.68  Aligned_cols=464  Identities=24%  Similarity=0.397  Sum_probs=365.3

Q ss_pred             CCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      +.+.||||+++|++|+++.+......++..+.+++++||+||++++++.++++|+||+++++++.+++..|++++.....
T Consensus        10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~   89 (481)
T 3czh_A           10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF   89 (481)
T ss_dssp             --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHH
T ss_pred             CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHH
Confidence            45689999999999999888532112688999999999999999999999999999999999999887778776543222


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHH--HhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRL--EMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA  196 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~  196 (538)
                      ..+.. ..++++..+|+.|+++|++++ +.|+...+  ..+.+.+.++++.+++.+.+.       +++ ++|+.+++..
T Consensus        90 ~~~~~-~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-------~~~-~~d~~~~~~~  159 (481)
T 3czh_A           90 MKMTK-MGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETY-------KGR-PFDFKQLITN  159 (481)
T ss_dssp             HHHHT-TCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT-------TTC-CBCCHHHHHH
T ss_pred             HhhcC-CCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-------CCC-CcCHHHHHHH
Confidence            22221 123345678999999999998 67765433  567899999999999887542       344 7999999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccc--cccccccccccccccchHHHHHHHHHHHHH
Q 036916          197 LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFA--IADSVPFLRWLDLDGIEKSMKRTAKELDQI  274 (538)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  274 (538)
                      +++|+++.++||.++ +..       ++....+.+.+..++.......  +...+|++.+++. ...++..+..+.+.++
T Consensus       160 ~~~~vi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~  230 (481)
T 3czh_A          160 AVSNITNLIIFGERF-TYE-------DTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDF  230 (481)
T ss_dssp             HHHHHHHHHHHSSCC-CTT-------CHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCC-CCC-------CHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHH
Confidence            999999999999988 322       3344455555555554432211  3455677765542 2345667778888899


Q ss_pred             HHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhCh
Q 036916          275 LEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHL  353 (538)
Q Consensus       275 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P  353 (538)
                      +.+.++++++....      +...|+++.|++...+.....+... ++++.+++.++++||+|||+++++|++++|++||
T Consensus       231 ~~~~i~~r~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P  304 (481)
T 3czh_A          231 LSRLIEKASVNRKP------QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYP  304 (481)
T ss_dssp             HHHHHHHHHTTCCT------TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHhcCC------CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhCh
Confidence            99999887764322      2346999999984332211112233 7889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccC
Q 036916          354 DVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRD  433 (538)
Q Consensus       354 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d  433 (538)
                      ++|+++++|++++++.++.++.+++.+|||++|||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++|||
T Consensus       305 ~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rd  384 (481)
T 3czh_A          305 NIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFD  384 (481)
T ss_dssp             HHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCC
Confidence            99999999999999888889999999999999999999999999997679999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCc
Q 036916          434 PNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEG  513 (538)
Q Consensus       434 ~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  513 (538)
                      |++|+||++|+||||+++.+.   ...+..++|||+|+|.|+|++||++|+++++++||++|+++++++.   +.+....
T Consensus       385 p~~~~dP~~F~PeR~l~~~~~---~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~  458 (481)
T 3czh_A          385 EKYWRDPEVFHPERFLDSSGY---FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL---VPDLKPR  458 (481)
T ss_dssp             TTTCSSTTSCCGGGGBCTTSC---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGC---CCCCCCC
T ss_pred             cccCCCccccCCCceeCCCCC---CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCC---CCCcccC
Confidence            999999999999999975421   1356789999999999999999999999999999999999987542   1233333


Q ss_pred             cCccccccccceeeeccCCCC
Q 036916          514 VGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       514 ~~~~~~~~~~~~~~~~~r~~~  534 (538)
                      .+++.. +.++.+++++|-|-
T Consensus       459 ~~~~~~-p~~~~~~~~~~~~~  478 (481)
T 3czh_A          459 LGMTLQ-PQPYLICAERRHHH  478 (481)
T ss_dssp             SSSSCC-CCCCCBEEEECC--
T ss_pred             CCceec-CCceEEEEEecccc
Confidence            455555 47899999999764


No 9  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=3.6e-75  Score=584.97  Aligned_cols=460  Identities=26%  Similarity=0.404  Sum_probs=359.8

Q ss_pred             CCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhh
Q 036916           42 VPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEIL  121 (538)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~  121 (538)
                      .||||+++|++|+++.+.   .+++..+.+|+++||+||++++|+.++|+|+||++++++|.+++..|++++.......+
T Consensus        17 ~~PgP~~~p~~G~~~~~~---~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~   93 (495)
T 2hi4_A           17 SPPEPWGWPLLGHVLTLG---KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI   93 (495)
T ss_dssp             CCCCCCCBTTTBTHHHHT---TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS
T ss_pred             CCCCCCCCcceeeHHhcC---ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh
Confidence            349999999999999886   46788999999999999999999999999999999999998876678766543222222


Q ss_pred             ccCCCceEec-cCchhHHHHHhhhhhhcCCH---HHH---H---hcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHH
Q 036916          122 GYNYAMFGFS-PYGPYWRQIRKIATLEILSN---HRL---E---MLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMK  191 (538)
Q Consensus       122 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~~~~---~~l---~---~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~  191 (538)
                      . ++.+++++ .+|+.|+++|++++ +.|+.   ...   .   .+.+.+.++++.+++.+.+.     ..+++ ++|+.
T Consensus        94 ~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~-~~d~~  165 (495)
T 2hi4_A           94 T-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQEL-----MAGPG-HFDPY  165 (495)
T ss_dssp             T-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHH-----HHTTS-CBCHH
T ss_pred             c-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHh-----ccCCC-ccchH
Confidence            1 12333344 47999999999998 55432   222   1   67899999999999998764     23355 79999


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHH
Q 036916          192 EIFNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKEL  271 (538)
Q Consensus       192 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~  271 (538)
                      +++..+++|+++.++||.++ +..       ++....+.+.+..+............+|++++++. ...++..+..+.+
T Consensus       166 ~~~~~~~~dvi~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~  236 (495)
T 2hi4_A          166 NQVVVSVANVIGAMCFGQHF-PES-------SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRF  236 (495)
T ss_dssp             HHHHHHHHHHHHHHHHGGGS-CTT-------CHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCC-CCC-------CHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHH
Confidence            99999999999999999988 332       23333444444444443322234456787766642 2345667778888


Q ss_pred             HHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 036916          272 DQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTL  350 (538)
Q Consensus       272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  350 (538)
                      .+++.+.++++++....      +...|+++.|++...+.....+... ++++.+++.++++||+|||+++++|++++|+
T Consensus       237 ~~~~~~~i~~r~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~  310 (495)
T 2hi4_A          237 LWFLQKTVQEHYQDFDK------NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLV  310 (495)
T ss_dssp             HHHHHHHHHHHHHTCCT------TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcc------cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Confidence            89999999888764322      2346999999974332210011123 7889999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchh
Q 036916          351 NHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKI  430 (538)
Q Consensus       351 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  430 (538)
                      +||++|+++++||+++++.++.++.+++.+|||++|||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++
T Consensus       311 ~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~  390 (495)
T 2hi4_A          311 TKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQV  390 (495)
T ss_dssp             HCHHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHH
T ss_pred             hCHHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHh
Confidence            99999999999999999988889999999999999999999999999997779999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCc
Q 036916          431 HRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDL  510 (538)
Q Consensus       431 ~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~  510 (538)
                      ||||++|+||++|+||||+++++.......+..++|||+|+|.|+|++||++|++++++.||++|++++.++.  . +++
T Consensus       391 ~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~-~~~  467 (495)
T 2hi4_A          391 NHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV--K-VDL  467 (495)
T ss_dssp             HHCTTTCSSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTC--C-CCC
T ss_pred             hCCcccCCCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCC--C-CCc
Confidence            9999999999999999999754210000134678999999999999999999999999999999999987642  1 334


Q ss_pred             cCccCccccccccc-eeeeccCC
Q 036916          511 SEGVGLTNLKATPL-QVLLTPRL  532 (538)
Q Consensus       511 ~~~~~~~~~~~~~~-~~~~~~r~  532 (538)
                      ....+++..| .++ +|+++ |.
T Consensus       468 ~~~~~~~~~p-~~~~~v~~~-R~  488 (495)
T 2hi4_A          468 TPIYGLTMKH-ARCEHVQAR-RF  488 (495)
T ss_dssp             CCBCSSSCBC-CCCCCBEEE-CC
T ss_pred             cccCCceecC-CCcceEEEE-Ec
Confidence            3445666665 456 88888 73


No 10 
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.2e-74  Score=580.99  Aligned_cols=454  Identities=20%  Similarity=0.297  Sum_probs=360.2

Q ss_pred             CCCCCCCCCCcCccccccccccCC--CCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccc
Q 036916           38 DKKTVPEPGGAWPLIGHLHLLGGQ--KPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKA  115 (538)
Q Consensus        38 ~~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~  115 (538)
                      ++...+|||+++|++||++.+...  ..+.+..+.+|+++||+||++++|+.++|+|+||+++++|+.+. ..|.+++..
T Consensus        21 ~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~   99 (482)
T 3k9v_A           21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEI   99 (482)
T ss_dssp             EEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCC
T ss_pred             CCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCc
Confidence            345578999999999999888421  24678899999999999999999999999999999999999885 456666542


Q ss_pred             ccc---hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccC-CCCccccHH
Q 036916          116 LAP---EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGD-SGKALVEMK  191 (538)
Q Consensus       116 ~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~-~g~~~vdl~  191 (538)
                      ...   ......+. .++..+|+.|+++|+++++.+++...+..+.+.+.++++.+++.+.+.     .. +|+ ++|+.
T Consensus       100 ~~~~~~~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~g~-~vd~~  172 (482)
T 3k9v_A          100 KPWKAYRDHRNEAY-GLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDEL-----CDERGR-IPDLY  172 (482)
T ss_dssp             HHHHHHHHHHTCCC-CTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHH-----CCTTSC-CTTHH
T ss_pred             hHHHHHHHhcCCCC-CceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCC-CCCHH
Confidence            211   11111122 346678999999999999545688889999999999999999998765     33 455 89999


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccc--cccccccccchHHHHHHHH
Q 036916          192 EIFNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVP--FLRWLDLDGIEKSMKRTAK  269 (538)
Q Consensus       192 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~~~~~~~~~~~~~~~~  269 (538)
                      +++..+++|+++.++||.++ +......   .+....+.+.+..++.....   ...+|  ++.+++ ....+...+..+
T Consensus       173 ~~~~~~t~dvi~~~~fG~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~-~~~~~~~~~~~~  244 (482)
T 3k9v_A          173 SELNKWSFESICLVLYEKRF-GLLQKET---EEEALTFITAIKTMMSTFGK---MMVTPVELHKRLN-TKVWQAHTLAWD  244 (482)
T ss_dssp             HHHHHHHHHHHHHHHHSCCC-CSSSTTS---TTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHHT-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHccccc-CCCCCCc---chHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhcC-CHHHHHHHHHHH
Confidence            99999999999999999998 4321110   12234455555555443322   22233  222222 122345556667


Q ss_pred             HHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 036916          270 ELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLT  349 (538)
Q Consensus       270 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L  349 (538)
                      .+.+++.+.+++++++...      +...|+++.++..   .     ...++++.+++.++++||+|||+++++|++++|
T Consensus       245 ~~~~~~~~~i~~r~~~~~~------~~~~d~l~~ll~~---~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L  310 (482)
T 3k9v_A          245 TIFKSVKPCIDNRLQRYSQ------QPGADFLCDIYQQ---D-----HLSKKELYAAVTELQLAAVETTANSLMWILYNL  310 (482)
T ss_dssp             HHHHHHHHHHHHHHHHTTT------CTTSCHHHHHHHH---T-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcc------CCchHHHHHHHhc---c-----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            7778888888887754322      2346788888762   1     123778999999999999999999999999999


Q ss_pred             HhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecch
Q 036916          350 LNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAK  429 (538)
Q Consensus       350 ~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~  429 (538)
                      ++||++|+|+++||+++++.++.++.+++.+|||++|||+|+||++|+++. ++|++.+|++++||.|||||.|.++.++
T Consensus       311 ~~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~  389 (482)
T 3k9v_A          311 SRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQV  389 (482)
T ss_dssp             HTCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSG
T ss_pred             HhCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEcccc
Confidence            999999999999999999988889999999999999999999999999997 5899999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCC
Q 036916          430 IHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLD  509 (538)
Q Consensus       430 ~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~  509 (538)
                      +||||++|+||++|+||||+++...    ..+..++|||+|+|.|+|++||++|+++++++||++|++++.++   .+.+
T Consensus       390 ~~~d~~~~~~p~~F~PeRfl~~~~~----~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~  462 (482)
T 3k9v_A          390 LGSSEDNFEDSHKFRPERWLQKEKK----INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDN---EPVE  462 (482)
T ss_dssp             GGGCTTTCSSTTSCCGGGGTCTTSC----CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCC---CCCC
T ss_pred             ccCCCccCCCcCccCccccCCCCCC----CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCC---CCcc
Confidence            9999999999999999999976531    35678999999999999999999999999999999999998764   1233


Q ss_pred             ccCccCccccccccceeeeccC
Q 036916          510 LSEGVGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~~r  531 (538)
                      +  ....+..++.++.|++++|
T Consensus       463 ~--~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          463 M--LHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             E--EESSSEEESSSCCEEEEEC
T ss_pred             c--ccceeecCCCCcceEEeeC
Confidence            3  3456778889999999887


No 11 
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=8.1e-76  Score=589.56  Aligned_cols=455  Identities=22%  Similarity=0.340  Sum_probs=347.4

Q ss_pred             CCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhC-CcccccCcccccch
Q 036916           41 TVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTN-DKVFCNRIKALAPE  119 (538)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~-~~~~~~~~~~~~~~  119 (538)
                      ..||||+++|++||++.+.   ++.+.++.+|+++||+||++++|+.++|+|+||++++++|.++ ...|.+++......
T Consensus        14 ~~~PGP~~~PliGn~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~   90 (485)
T 3nxu_A           14 LGIPGPTPLPFLGNILSYH---KGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG   90 (485)
T ss_dssp             HTCCCCCCBTTTBTGGGGG---GCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG
T ss_pred             CCCCCCCCcCeecCcHHhh---cChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc
Confidence            3589999999999999986   5678899999999999999999999999999999999999887 56676655433222


Q ss_pred             hhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHH
Q 036916          120 ILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTF  199 (538)
Q Consensus       120 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~  199 (538)
                      ..+    ..++..+|+.|+++|++++ +.|+..+++.+.+.+.++++.+++.+.+.     ..++. ++|+.+++..+++
T Consensus        91 ~~~----~~l~~~~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~g~-~~d~~~~~~~~~~  159 (485)
T 3nxu_A           91 FMK----SAISIAEDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRRE-----AETGK-PVTLKDVFGAYSM  159 (485)
T ss_dssp             GGG----GSTTTCCHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHTC-CEEHHHHHHHHHH
T ss_pred             ccc----cCccccCCcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHH-----hccCC-cCcHHHHHHHHHH
Confidence            222    1246678999999999998 89999999999999999999999999764     33455 8999999999999


Q ss_pred             HHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---ccccccccccccc----cccccchHHHHHHHHHHH
Q 036916          200 NVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTG---AFAIADSVPFLRW----LDLDGIEKSMKRTAKELD  272 (538)
Q Consensus       200 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~  272 (538)
                      |+++.++||.++ +...       .....+.+.+..+.....   .......+|++.+    ++.....   +...+.+.
T Consensus       160 dvi~~~~fG~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~---~~~~~~~~  228 (485)
T 3nxu_A          160 DVITSTSFGVNI-DSLN-------NPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFP---REVTNFLR  228 (485)
T ss_dssp             HHHHHHHHSCCC-CGGG-------CTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSC---HHHHHHHH
T ss_pred             HHHHHHHcCCcc-cccc-------CCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhch---HHHHHHHH
Confidence            999999999998 3321       011122222221111000   0011122333221    1111111   22333444


Q ss_pred             HHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHh
Q 036916          273 QILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLN  351 (538)
Q Consensus       273 ~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~  351 (538)
                      +++++.++++.+..       .+...|+++.|++...+.....+... ++++.+++.++++||+|||+++++|++++|++
T Consensus       229 ~~~~~~~~~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~  301 (485)
T 3nxu_A          229 KSVKRMKESRLEDT-------QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT  301 (485)
T ss_dssp             HHHHHHHHHHHHCC----------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhcc-------CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence            55555554443211       13456999999984332211112233 78899999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhc
Q 036916          352 HLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIH  431 (538)
Q Consensus       352 ~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~  431 (538)
                      ||++|+++++|++++++.++.++++++.+|||++|||+|+||++|+++. ++|++++|++++|+.|||||.|.++.+++|
T Consensus       302 ~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~  380 (485)
T 3nxu_A          302 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALH  380 (485)
T ss_dssp             CHHHHHHHHHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHH
T ss_pred             CHHHHHHHHHHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhc
Confidence            9999999999999999988889999999999999999999999999986 599999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCcc
Q 036916          432 RDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLS  511 (538)
Q Consensus       432 ~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~  511 (538)
                      |||++|+||++|+||||+++...   ...+..++|||.|+|.|+|++||++|++++++.||++|+|++.++.  . .++.
T Consensus       381 ~d~~~~~dp~~F~PeR~l~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~-~~~~  454 (485)
T 3nxu_A          381 RDPKYWTEPEKFLPERFSKKNKD---NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET--Q-IPLK  454 (485)
T ss_dssp             TCTTTCSSTTSCCGGGGSHHHHT---TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTC--C-SSCC
T ss_pred             CChhhcCCccCcCccccCCCccc---cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCC--C-CCcc
Confidence            99999999999999999975321   1245679999999999999999999999999999999999987652  1 2233


Q ss_pred             CccCccccccccceeeeccCCCC
Q 036916          512 EGVGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~r~~~  534 (538)
                      ...+.+..++.+++|++++|+..
T Consensus       455 ~~~~~~~~p~~~~~~~~~~r~~~  477 (485)
T 3nxu_A          455 LSLGGLLQPEKPVVLKVESRDGT  477 (485)
T ss_dssp             BCSSSSCCBSSCCEEEEEEC---
T ss_pred             cCCCeeccCCCCeEEEEEEccCC
Confidence            34456677889999999999653


No 12 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1e-75  Score=590.55  Aligned_cols=450  Identities=26%  Similarity=0.435  Sum_probs=352.8

Q ss_pred             CCCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccccc
Q 036916           38 DKKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALA  117 (538)
Q Consensus        38 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~  117 (538)
                      .+.+.||||++      ++.+..  .+++..+.+|+++||+||++++|+.++|+|+||++++++|.++...|++++....
T Consensus        26 ~~~~lPPGP~~------l~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~   97 (496)
T 3qz1_A           26 RNLHLPPLVPG------FLHLLQ--PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS   97 (496)
T ss_dssp             ---CCCCBCSC------SCTTSS--SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred             cCCCCCcCCcc------ccccCC--CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence            44568899875      344432  6788999999999999999999999999999999999999988778887765443


Q ss_pred             chhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHH
Q 036916          118 PEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNAL  197 (538)
Q Consensus       118 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~  197 (538)
                      ......+..++++..+|+.|+++|++++ +.|+...++.+.+.+.++++.+++.+.+       .+++ ++|+.+++..+
T Consensus        98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~-------~~~~-~vd~~~~~~~~  168 (496)
T 3qz1_A           98 YKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRV-------QAGA-PVTIQKEFSLL  168 (496)
T ss_dssp             TTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHT-------TCSC-CCHHHHHHTHH
T ss_pred             HHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHh-------cCCC-ccCHHHHHHHH
Confidence            3322222224445545999999999998 6777666678999999999999988864       2345 89999999999


Q ss_pred             HHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcc--cccccccccccccccccchHHHHHHHHHHHHHH
Q 036916          198 TFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGA--FAIADSVPFLRWLDLDGIEKSMKRTAKELDQIL  275 (538)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~  275 (538)
                      ++|+|+.++||..-           ++....+.+.+...+.....  ..+.+.+|++++++.. ..+...+..+.+.+++
T Consensus       169 ~~dvi~~~~fG~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~-~~~~~~~~~~~~~~~~  236 (496)
T 3qz1_A          169 TCSIICYLTFGNKE-----------DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNP-GLWRLKQAIENRDHMV  236 (496)
T ss_dssp             HHHHTTTTSTTCCC-----------HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCH-HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCC-----------ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChH-HHHHHHHHHHHHHHHH
Confidence            99999999999821           34444455555444333222  2345567877777532 3566778888899999


Q ss_pred             HHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCC--CChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhCh
Q 036916          276 EGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPS--FDADTITKATCLALILGGTDTTTFTLTWALTLTLNHL  353 (538)
Q Consensus       276 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~--~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P  353 (538)
                      .+.++++++....      +...|+++.|++...+....++  ...++++.+++.++++||+|||+++++|++++|++||
T Consensus       237 ~~~i~~~~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P  310 (496)
T 3qz1_A          237 EKQLRRHKESMVA------GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHP  310 (496)
T ss_dssp             HHHHHHHHHSCCS------SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHhhccC------CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCH
Confidence            9999988775433      2456899999873222211111  2237889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC----CCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecch
Q 036916          354 DVLKKVQNELDTHIGR----ERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAK  429 (538)
Q Consensus       354 ~~~~~l~~Ei~~~~~~----~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~  429 (538)
                      ++|+|+++||+++++.    ++.+ .+++.+|||++|||+|+||++|+++..++|++++|++++|+.|||||.|.++.++
T Consensus       311 ~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~  389 (496)
T 3qz1_A          311 EIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQG  389 (496)
T ss_dssp             HHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHH
T ss_pred             HHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHH
Confidence            9999999999999986    5567 9999999999999999999999999877999999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCC
Q 036916          430 IHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLD  509 (538)
Q Consensus       430 ~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~  509 (538)
                      +||||++|+||++|+||||+++.       ....++|||+|+|.|+|++||++|+++++++||++|++++++++.  +++
T Consensus       390 ~~~d~~~~~dp~~F~PeR~l~~~-------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~  460 (496)
T 3qz1_A          390 AHLDETVWEQPHEFRPDRFLEPG-------ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGA--LPS  460 (496)
T ss_dssp             HTTCTTTSSSTTSCCCCCCC----------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCC--CCC
T ss_pred             hhCChhhcCCcccCCcccccCCC-------CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCC--CCC
Confidence            99999999999999999999754       123789999999999999999999999999999999999886532  233


Q ss_pred             ccCc--cCccccccccceeeeccCCC
Q 036916          510 LSEG--VGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       510 ~~~~--~~~~~~~~~~~~~~~~~r~~  533 (538)
                      +...  .+++..+ .++++++++|+.
T Consensus       461 ~~~~~~~~~~~~~-~~~~v~~~~R~~  485 (496)
T 3qz1_A          461 LQPDPYCGVNLKV-QPFQVRLQPRGV  485 (496)
T ss_dssp             SCCSCCCSSCCCC-CCCCCCCCCC--
T ss_pred             CCcccCcceEecC-CceEEEEEEecc
Confidence            3333  4566665 699999999964


No 13 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=4.7e-74  Score=579.45  Aligned_cols=452  Identities=21%  Similarity=0.291  Sum_probs=354.1

Q ss_pred             CCCCCCCCCcCccccccccccCC-CCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQ-KPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALA  117 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~  117 (538)
                      +.+.||||+++|++||++.+... ....+..+.+|+++||+||++++|+.++|+|+||++++++++++  .|++++....
T Consensus        43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~  120 (503)
T 3s79_A           43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKL  120 (503)
T ss_dssp             --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHH
T ss_pred             ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhh
Confidence            34589999999999999988521 01345678899999999999999999999999999999999653  5666654322


Q ss_pred             -chhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH
Q 036916          118 -PEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA  196 (538)
Q Consensus       118 -~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~  196 (538)
                       ....+..+.++++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.     .++++ .+|+.+++..
T Consensus       121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~-----~~~~~-~vdl~~~~~~  193 (503)
T 3s79_A          121 GLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEV-----TNESG-YVDVLTLLRR  193 (503)
T ss_dssp             HHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGT-----BCTTS-CBCHHHHHHH
T ss_pred             hhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCC-eEcHHHHHHH
Confidence             2333334445567778999999999998 89999999999999999998888776543     34455 7999999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHH
Q 036916          197 LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILE  276 (538)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  276 (538)
                      +++++++.++||.++ +.        ++....+.+.+.........   ...++.+.|     ..++..+..+.+.+++.
T Consensus       194 ~~~~vi~~~~fG~~~-~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~  256 (503)
T 3s79_A          194 VMLDTSNTLFLRIPL-DE--------SAIVVKIQGYFDAWQALLIK---PDIFFKISW-----LYKKYEKSVKDLKDAIE  256 (503)
T ss_dssp             HHHHHHHHHHTCCCC-CH--------HHHHHHHHHHHHHHHHHTTC---CHHHHHSGG-----GTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCccc-Cc--------hhHHHHHHHHHHHHHHHhcC---cHHHhhcch-----hHHHHHHHHHHHHHHHH
Confidence            999999999999988 21        22222233333222221110   111111112     24567778888999999


Q ss_pred             HHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHH
Q 036916          277 GWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVL  356 (538)
Q Consensus       277 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~  356 (538)
                      +.++++++....+..  .+...|+++.|++.. +..    ...++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       257 ~~i~~~~~~~~~~~~--~~~~~d~l~~ll~~~-~~~----~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~  329 (503)
T 3s79_A          257 VLIAEKRRRISTEEK--LEECMDFATELILAE-KRG----DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVE  329 (503)
T ss_dssp             HHHHHHHHHHHTCTT--TTTTCCHHHHHHHHH-HTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHhhcccc--cchHHHHHHHHHHhc-ccC----CCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHH
Confidence            999888765433211  123459999999843 221    1237788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCC
Q 036916          357 KKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNI  436 (538)
Q Consensus       357 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~  436 (538)
                      +|+++||+++++ ++.++.+++.+|||++|||+|+||++|+++.. .|.+++|++++||.|||||.|.++.+++||| ++
T Consensus       330 ~kl~~Ei~~v~~-~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~  406 (503)
T 3s79_A          330 EAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EF  406 (503)
T ss_dssp             HHHHHHHHHHTT-TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCE-EEECSSCEEETTEEECTTCEEEECHHHHTTT-SS
T ss_pred             HHHHHHHHHHhC-CCCCCHHHHhcCHHHHHHHHhhhccCCCcccc-cccccCCeeECCEEECCCCEEEeehHHhCCC-cc
Confidence            999999999998 57899999999999999999999999999986 6999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCc
Q 036916          437 WEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGL  516 (538)
Q Consensus       437 ~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  516 (538)
                      |+||++|+||||++..       ....++|||+|+|.|+|++||.+|+++++++||++|+++++++...  .+.....+.
T Consensus       407 ~~dp~~F~PeRf~~~~-------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~  477 (503)
T 3s79_A          407 FPKPNEFTLENFAKNV-------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCV--ESIQKIHDL  477 (503)
T ss_dssp             CSSTTSCCGGGGSSCC-------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCT--TTSCEEESS
T ss_pred             CCChhhCChhhcCCCC-------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCc--cccccccce
Confidence            9999999999999653       3467999999999999999999999999999999999999876322  234445577


Q ss_pred             ccccccc---ceeeeccCCCCC
Q 036916          517 TNLKATP---LQVLLTPRLHAP  535 (538)
Q Consensus       517 ~~~~~~~---~~~~~~~r~~~~  535 (538)
                      +..|..+   ++|++++|+.+.
T Consensus       478 ~~~p~~~~~~~~v~~~~R~~~~  499 (503)
T 3s79_A          478 SLHPDETKNMLEMIFTPRNSDR  499 (503)
T ss_dssp             SEEECTTSCCCCEEEEECC---
T ss_pred             eecCCCccceeeEEeccCCchh
Confidence            7777665   999999997553


No 14 
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=7.3e-74  Score=570.52  Aligned_cols=440  Identities=20%  Similarity=0.275  Sum_probs=347.2

Q ss_pred             CCCCCC-cCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccccc--c
Q 036916           42 VPEPGG-AWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALA--P  118 (538)
Q Consensus        42 ~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~--~  118 (538)
                      .||+|+ ++|++||++.+.   ++++.++.+++++||+||++++++.++|+|+||+.+++++.++...++.++....  .
T Consensus        12 ~PP~~~~~lP~iG~~~~~~---~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~   88 (461)
T 3ld6_A           12 SPPYIFSPIPFLGHAIAFG---KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT   88 (461)
T ss_dssp             CCCBCCCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred             CCCCCCCCcCeeeeHHHhh---hCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence            466665 599999999997   6789999999999999999999999999999999999999988777766543221  1


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALT  198 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~  198 (538)
                      ...+   .+++++.+|+.|+++|+++. +.|+...++.+.+.+.++++++++.+.+         +. .+|+.+.+..++
T Consensus        89 ~~~g---~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~  154 (461)
T 3ld6_A           89 PVFG---KGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE---------SG-EKNVFEALSELI  154 (461)
T ss_dssp             HHHC---TTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS---------EE-EEEHHHHHHHHH
T ss_pred             ccCC---CccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHhh---------cC-CccHHHHHHHHH
Confidence            2222   23456788999999999998 8999999999999999888887765532         22 689999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHH
Q 036916          199 FNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGW  278 (538)
Q Consensus       199 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (538)
                      +++++.++||.++.+..       .+.   +.+....+.....  .....+|.  |++.. ...+..+..+.+.+++.+.
T Consensus       155 ~~~i~~~~fG~~~~~~~-------~~~---~~~~~~~~~~~~~--~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~~~  219 (461)
T 3ld6_A          155 ILTASHCLHGKEIRSQL-------NEK---VAQLYADLDGGFS--HAAWLLPG--WLPLP-SFRRRDRAHREIKDIFYKA  219 (461)
T ss_dssp             HHHHHHHHTCHHHHHTC-------CHH---HHHHHHHHHTTSS--HHHHHSCT--TSCCH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCcchhhhh-------hhh---hhhhhhhhhhhhh--hHHHhhhh--hccCc-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999883221       222   2222222222111  11112232  22222 2455666777888888888


Q ss_pred             HHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHH
Q 036916          279 LEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLK  357 (538)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~  357 (538)
                      +++++...        +...|+++.|++ ...+   ++... ++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       220 i~~r~~~~--------~~~~d~l~~ll~-~~~~---~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~  287 (461)
T 3ld6_A          220 IQKRRQSQ--------EKIDDILQTLLD-ATYK---DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQK  287 (461)
T ss_dssp             HHHHTTCC--------CCCCSHHHHHHT-CBCT---TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHhcC--------CCCcchhhhhHH-hhhc---ccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHH
Confidence            88766532        345689999987 3322   22233 78899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCC-CCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCC
Q 036916          358 KVQNELDTHIGRE-RQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNI  436 (538)
Q Consensus       358 ~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~  436 (538)
                      ++++|++++++.+ ..++.+++++|||++|||+|+||++|+++.. .|.+++|++++||.|||||.|.++.+++||||++
T Consensus       288 kl~~Ei~~v~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~  366 (461)
T 3ld6_A          288 KCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDS  366 (461)
T ss_dssp             HHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred             HHHHHHHHHhcccccchhHHHHHHHhhhhheeeeccccCCchhcc-ccccccceeeCCcccCCCCeeeechHhhcCCccc
Confidence            9999999999874 5678999999999999999999999999875 8999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCc
Q 036916          437 WEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGL  516 (538)
Q Consensus       437 ~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  516 (538)
                      |+||++|+||||+++++.   ...+..|+|||+|+|.|+|++||++|++++++.||++|+|+++++.  . +... ..++
T Consensus       367 ~~dP~~F~PeRfl~~~~~---~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~--~-~~~~-~~~~  439 (461)
T 3ld6_A          367 WVERLDFNPDRYLQDNPA---SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY--F-PTVN-YTTM  439 (461)
T ss_dssp             CTTTTSCCGGGGGSCCHH---HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC--C-CCBC-CSSS
T ss_pred             cCCccccCccccCCCCcc---cCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCC--C-Cccc-ccce
Confidence            999999999999986531   1245689999999999999999999999999999999999998752  2 2222 2233


Q ss_pred             cccccccceeeeccCCCC
Q 036916          517 TNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       517 ~~~~~~~~~~~~~~r~~~  534 (538)
                      +. ++.++.|++++|++-
T Consensus       440 ~~-~p~~~~v~~~~Rss~  456 (461)
T 3ld6_A          440 IH-TPENPVIRYKRRSTH  456 (461)
T ss_dssp             SC-CBSSCEEEEEECC--
T ss_pred             EE-cCCceEEEEEECCCC
Confidence            33 456889999999764


No 15 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=2.2e-72  Score=564.88  Aligned_cols=465  Identities=19%  Similarity=0.216  Sum_probs=353.7

Q ss_pred             CCCCCCCCCCcCccccccccccCC--CCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccc
Q 036916           38 DKKTVPEPGGAWPLIGHLHLLGGQ--KPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKA  115 (538)
Q Consensus        38 ~~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~  115 (538)
                      ++...+|||+.+|+. +++.+...  ....+..+.+|+++||+||++++|+.+.|+|+||+++++||.+++ .|++++..
T Consensus         6 ~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~~   83 (487)
T 3n9y_A            6 RPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFLI   83 (487)
T ss_dssp             BCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCCC
T ss_pred             CCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCCC
Confidence            344568999888775 66655321  235778899999999999999999999999999999999998764 57666543


Q ss_pred             ccch--hhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH
Q 036916          116 LAPE--ILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI  193 (538)
Q Consensus       116 ~~~~--~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~  193 (538)
                      ....  ....+....++..+|+.|+++|+++++.+|+...++.+.+.+.++++++++.+.+...+. ..++. ++|+.++
T Consensus        84 ~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~-~~~~~-~vd~~~~  161 (487)
T 3n9y_A           84 PPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKA-GSGNY-SGDISDD  161 (487)
T ss_dssp             HHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHH-TSSSE-EECCHHH
T ss_pred             cHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhccc-ccCCC-CccHHHH
Confidence            2111  011111223577889999999999984469999999999999999999999987642111 12234 7999999


Q ss_pred             HHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccccccccccc--ccccccccchHHHHHHHHHH
Q 036916          194 FNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPF--LRWLDLDGIEKSMKRTAKEL  271 (538)
Q Consensus       194 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~  271 (538)
                      +..+++|+++.++||.++ +..+...   ++....+.+.+..++.....   ...+|.  +.+++. ...+...+..+.+
T Consensus       162 ~~~~t~dvi~~~~fG~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~~-~~~~~~~~~~~~~  233 (487)
T 3n9y_A          162 LFRFAFESITNVIFGERQ-GMLEEVV---NPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFRT-KTWKDHVAAWDVI  233 (487)
T ss_dssp             HHHHHHHHHHHHHHSSCC-CTTSSSC---CHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHCH-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccc-cccCCCC---ChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhccc-HHHHHHHHHHHHH
Confidence            999999999999999998 4321111   23344555555555544321   223332  222221 1233344444555


Q ss_pred             HHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHh
Q 036916          272 DQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLN  351 (538)
Q Consensus       272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~  351 (538)
                      .+++.+.++++.++...... ..+...|+++.+++   +     +...++++.+++.++++||+|||+++++|++++|++
T Consensus       234 ~~~~~~~i~~~~~~~~~~~~-~~~~~~d~l~~ll~---~-----~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~  304 (487)
T 3n9y_A          234 FSKADIYTQNFYWELRQKGS-VHHDYRGILYRLLG---D-----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMAR  304 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC-CCSSCCCHHHHHHH---S-----CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cccchHHHHHHHHh---c-----CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence            66666666655433211100 01244689999987   1     112378899999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhc
Q 036916          352 HLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIH  431 (538)
Q Consensus       352 ~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~  431 (538)
                      ||++|+|+++||+++++.++.++.+++.+|||++|||+|+||++|+++. ++|++++|++++||.|||||.|.++.+++|
T Consensus       305 ~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~  383 (487)
T 3n9y_A          305 NLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALG  383 (487)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHH
T ss_pred             ChHHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhc
Confidence            9999999999999999877777799999999999999999999999985 599999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCcc
Q 036916          432 RDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLS  511 (538)
Q Consensus       432 ~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~  511 (538)
                      |||++|+||++|+||||++..+.    ..+..++|||.|+|.|+|++||++|+++++++||++|+|++.++     .++.
T Consensus       384 ~d~~~~~dp~~F~PeR~l~~~~~----~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-----~~~~  454 (487)
T 3n9y_A          384 REPTFFFDPENFDPTRWLSKDKN----ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHL-----SDVG  454 (487)
T ss_dssp             TCTTTSSSTTSCCGGGGTCSCTT----SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTC-----CCCC
T ss_pred             CCcccCCCcccCChhhcCCCCCC----CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCC-----cccc
Confidence            99999999999999999975421    23568999999999999999999999999999999999999765     1233


Q ss_pred             CccCccccccccceeeeccCCC
Q 036916          512 EGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ...+.+..|+.++.|++++|+.
T Consensus       455 ~~~~~~~~p~~~~~~~~~~r~~  476 (487)
T 3n9y_A          455 TTFNLILMPEKPISFTFWPFNQ  476 (487)
T ss_dssp             EEESSSEEESSCCCEEEEEC--
T ss_pred             cceeeeecCCCCceeEEEECCc
Confidence            3456778888999999999953


No 16 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=2e-71  Score=549.58  Aligned_cols=433  Identities=22%  Similarity=0.294  Sum_probs=342.5

Q ss_pred             CCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      +.+.||||+++|++||++.+.   .+.+ ++.+++++||+||++++++.+.|+|+||+++++++.+++..|+.+......
T Consensus        10 ~~~~pPgp~~~P~iG~~~~~~---~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~   85 (444)
T 2ve3_A           10 SLPIPPGDFGLPWLGETLNFL---NDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTR   85 (444)
T ss_dssp             CCCCCCCCCCBTTTBTHHHHH---HCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHH
T ss_pred             CCCCCCCCCCCCccccHHHHh---cCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHH
Confidence            445799999999999998886   3345 788999999999999988888999999999999998876556533211112


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALT  198 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~  198 (538)
                      ..++.  .+ ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+..         ++ ++|+.+++..++
T Consensus        86 ~~~g~--~~-l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~vd~~~~~~~~~  151 (444)
T 2ve3_A           86 ILLGP--NA-LATQMGEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK---------AN-EVIWYPQLRRMT  151 (444)
T ss_dssp             HHHCT--TS-GGGCCHHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH---------SS-EEEHHHHHHHHH
T ss_pred             HHhCc--cc-cccCCchHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC---------CC-cEeHHHHHHHHH
Confidence            22222  12 34568999999999998 8999999999999999999999988742         34 799999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHH
Q 036916          199 FNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGW  278 (538)
Q Consensus       199 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (538)
                      ++++++++|| .+.+.        +   ..+.+.+.........      +|.  +++. ...++..+..+.+.+++.+.
T Consensus       152 ~~vi~~~~fG-~~~~~--------~---~~~~~~~~~~~~~~~~------~~~--~~p~-~~~~~~~~~~~~~~~~~~~~  210 (444)
T 2ve3_A          152 FDVAATLFMG-EKVSQ--------N---PQLFPWFETYIQGLFS------LPI--PLPN-TLFGKSQRARALLLAELEKI  210 (444)
T ss_dssp             HHHHHHHHTC-HHHHS--------C---TTHHHHHHHHHHHHSS------CCC--CSTT-SHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcC-CCccc--------H---HHHHHHHHHHHHHHhc------CCc--cCCC-cHHHHHHHHHHHHHHHHHHH
Confidence            9999999999 44111        1   1223333332222111      121  1111 11345566677788888888


Q ss_pred             HHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHH
Q 036916          279 LEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLK  357 (538)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~  357 (538)
                      +++++++.        +...|+++.|++ ..+.   ++... ++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       211 i~~r~~~~--------~~~~d~l~~ll~-~~~~---~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~  278 (444)
T 2ve3_A          211 IKARQQQP--------PSEEDALGILLA-ARDD---NNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRE  278 (444)
T ss_dssp             HHHHHTSC--------CCCSSHHHHHHH-CBCT---TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHhcCC--------CCccCHHHHHHh-cccc---CCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHH
Confidence            88876531        245689999997 3222   12223 78899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCC
Q 036916          358 KVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIW  437 (538)
Q Consensus       358 ~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~  437 (538)
                      ++++|++.+++.+ .++.+++.+|||++|||+|+||++|+++.. +|.+++|++++|+.|||||.|.++.+++||||++|
T Consensus       279 ~l~~Ei~~~~~~~-~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~  356 (444)
T 2ve3_A          279 RVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLY  356 (444)
T ss_dssp             HHHHHHHSSCCSS-CCCHHHHTTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS
T ss_pred             HHHHHHHHhccCC-CCChhhhhcChHHHHHHHHHHhcCCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhc
Confidence            9999999998764 789999999999999999999999999974 79999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCcc
Q 036916          438 EEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGLT  517 (538)
Q Consensus       438 ~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  517 (538)
                      +||++|+||||++....  ....+..++|||+|+|.|+|++||++|++++++.||++|++++.++.  + .++  ....+
T Consensus       357 ~dP~~F~PeR~l~~~~~--~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~-~~~--~~~~~  429 (444)
T 2ve3_A          357 PDPEKFDPERFTPDGSA--THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ--N-LEL--VVTPS  429 (444)
T ss_dssp             SSTTSCCGGGSSTTSTT--TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC--C-CCE--EESSS
T ss_pred             CCcCccCccccCCCCcc--cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC--C-cce--ecccc
Confidence            99999999999975421  11245679999999999999999999999999999999999987642  1 222  33456


Q ss_pred             ccccccceeeeccC
Q 036916          518 NLKATPLQVLLTPR  531 (538)
Q Consensus       518 ~~~~~~~~~~~~~r  531 (538)
                      ..+..++.|++++|
T Consensus       430 ~~~~~~l~v~~~~r  443 (444)
T 2ve3_A          430 PRPKDNLRVKLHSL  443 (444)
T ss_dssp             EEETTCCEEEEEEC
T ss_pred             ccCCCCceEEEEeC
Confidence            67788999999988


No 17 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=3.6e-70  Score=544.31  Aligned_cols=447  Identities=20%  Similarity=0.273  Sum_probs=341.8

Q ss_pred             CCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhh
Q 036916           42 VPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEIL  121 (538)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~  121 (538)
                      .||||+++|++||++.+..  ...+..+.+|+++||+||++++++.+.|+|+||+++++++.+.  .|............
T Consensus         4 ~~PGP~~~p~iG~l~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~   79 (470)
T 2ij2_A            4 EMPQPKTFGELKNLPLLNT--DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVR   79 (470)
T ss_dssp             CCCCCCCCGGGTTGGGGCS--SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHH
T ss_pred             CCCCCCCCCccccHHHHhc--ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHH
Confidence            5789999999999998853  4567889999999999999999999999999999999999653  34321211111111


Q ss_pred             ccCCCceEec-cCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHHH
Q 036916          122 GYNYAMFGFS-PYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTFN  200 (538)
Q Consensus       122 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~~  200 (538)
                      ...+.++++. .+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+      ..++. ++|+.+++..+++|
T Consensus        80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~~-~vd~~~~~~~~~~~  151 (470)
T 2ij2_A           80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWER------LNADE-HIEVPEDMTRLTLD  151 (470)
T ss_dssp             HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHT------CCTTC-CEEHHHHHHHHHHH
T ss_pred             HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHh------hCCCC-eEEHHHHHHHHHHH
Confidence            1112233233 48999999999998 7999999999999999999999987753      22344 79999999999999


Q ss_pred             HHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 036916          201 VATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLE  280 (538)
Q Consensus       201 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  280 (538)
                      +|+.++||.++.....       +....+.+.+...+.......  ...|++.+++ ....+...+..+.+.+++.+.++
T Consensus       152 vi~~~~fG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~  221 (470)
T 2ij2_A          152 TIGLCGFNYRFNSFYR-------DQPHPFITSMVRALDEAMNKL--QRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIA  221 (470)
T ss_dssp             HHHHHHHSCCCCGGGC-------SSCCHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCccccccc-------CCCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998722110       011123333333332211100  1113333332 12234556667788888888888


Q ss_pred             HHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHH
Q 036916          281 EHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKV  359 (538)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l  359 (538)
                      ++++..        ....|+++.|++ ..+..  .+... ++++.+++.++++||+|||+++++|++++|++||++|+++
T Consensus       222 ~r~~~~--------~~~~dll~~ll~-~~~~~--~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl  290 (470)
T 2ij2_A          222 DRKASG--------EQSDDLLTHMLN-GKDPE--TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA  290 (470)
T ss_dssp             HHHHHC--------CCCSSHHHHHHH-CCCTT--TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHhcc--------cCchhHHHHHHh-ccCcc--cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            776532        234689999997 32211  12233 7889999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccc-eEeCCCCEEEEecchhccCCCCC-
Q 036916          360 QNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAG-YHVPAGTRLFVNIAKIHRDPNIW-  437 (538)
Q Consensus       360 ~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g-~~ip~g~~v~~~~~~~~~d~~~~-  437 (538)
                      ++|++++++. +.++++++.+|||++|||+|+||++|+++.. +|.+.+|++++| |.|||||.|.++.+++||||++| 
T Consensus       291 ~~Ei~~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g  368 (470)
T 2ij2_A          291 AEEAARVLVD-PVPSYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWG  368 (470)
T ss_dssp             HHHHHHHCCS-SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHC
T ss_pred             HHHHHHHcCC-CCCCHHHHhCCHHHHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhC
Confidence            9999999986 4599999999999999999999999999974 899999999999 99999999999999999999999 


Q ss_pred             CCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCcc
Q 036916          438 EEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGLT  517 (538)
Q Consensus       438 ~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  517 (538)
                      +||++|+|||| +..    ....+..++|||+|+|.|+|++||++|++++++.||++|+++ .++  .  .++....+++
T Consensus       369 ~dP~~F~PeR~-~~~----~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~--~--~~~~~~~~~~  438 (470)
T 2ij2_A          369 DDVEEFRPERF-ENP----SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHT--N--YELDIKETLT  438 (470)
T ss_dssp             SCTTSCCGGGG-SSG----GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTT--C--CCCCEEESSS
T ss_pred             CCccccCcccc-CCC----CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCC--C--CccccccceE
Confidence            99999999999 321    112346789999999999999999999999999999999998 332  1  2233334566


Q ss_pred             ccccccceeeeccCCCC
Q 036916          518 NLKATPLQVLLTPRLHA  534 (538)
Q Consensus       518 ~~~~~~~~~~~~~r~~~  534 (538)
                      ..+. +++|++++|..+
T Consensus       439 ~~p~-~~~v~~~~R~~~  454 (470)
T 2ij2_A          439 LKPE-GFVVKAKSKKIP  454 (470)
T ss_dssp             EEET-TCEEEEEECCCC
T ss_pred             ecCC-CeEEEEEEccCC
Confidence            6765 999999999654


No 18 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=7.7e-70  Score=541.52  Aligned_cols=430  Identities=20%  Similarity=0.281  Sum_probs=337.2

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc--cchhhc--cCCCceEeccCchhHH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL--APEILG--YNYAMFGFSPYGPYWR  138 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~g~~w~  138 (538)
                      ..++..+.+|+++||+||++++++.+.|+|+||++++++|.++  .+..++...  .....+  ..+.++++..+|+.|+
T Consensus        10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~   87 (456)
T 3mdm_A           10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH   87 (456)
T ss_dssp             CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred             chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence            4568889999999999999999999999999999999999753  333332211  011111  1122344556899999


Q ss_pred             HHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHHHHHHHHHhccccccCCCCC
Q 036916          139 QIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTFNVATRMVVGKRLVRGGTTN  218 (538)
Q Consensus       139 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~  218 (538)
                      ++|++++ +.|+...++.+.+.+.++++.+++.+.+.     .+++. ++|+.+++..+++|+++.++||.++ +..   
T Consensus        88 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~~~-~vd~~~~~~~~~~dvi~~~~fG~~~-~~~---  156 (456)
T 3mdm_A           88 KQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAK-----ADGQT-PVSMQDMLTYTAMDILAKAAFGMET-SML---  156 (456)
T ss_dssp             HHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHT-----CSSSS-CEEHHHHHHHHHHHHHHHHHHSCCC-CGG---
T ss_pred             HHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCC-eeeHHHHHHHHHHHHHHHHHcCCCh-hhh---
Confidence            9999998 89999999999999999999999998764     44455 8999999999999999999999998 322   


Q ss_pred             CccchHHHHHHHHHHHHHHHHhccccccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhccc
Q 036916          219 HQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDL-DGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEE  297 (538)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  297 (538)
                          ......+.+.+..+......    ...|++.+++. +...+...+..+.+.+++.++++++++....+.    +..
T Consensus       157 ----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~----~~~  224 (456)
T 3mdm_A          157 ----LGAQKPLSQAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGE----EVP  224 (456)
T ss_dssp             ----GTCCHHHHHHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----CCC
T ss_pred             ----cccccHHHHHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----cch
Confidence                11112233333333322211    01233333321 112344556667778888888887766433211    235


Q ss_pred             ccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhh
Q 036916          298 NDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESD  377 (538)
Q Consensus       298 ~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  377 (538)
                      .|+++.+++. .+.     ...++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.++.++.++
T Consensus       225 ~d~l~~ll~~-~~~-----~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  298 (456)
T 3mdm_A          225 ADILTQILKA-EEG-----AQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFED  298 (456)
T ss_dssp             CCHHHHHHHH-TSS-----CSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHH
T ss_pred             hhHHHHHHHh-cCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHH
Confidence            6999999983 221     1237788999999999999999999999999999999999999999999999888999999


Q ss_pred             hcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccc
Q 036916          378 IKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDV  457 (538)
Q Consensus       378 ~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~  457 (538)
                      +.+|||++|||+|+||++|+++.. .|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||+++..    
T Consensus       299 l~~lpyl~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~----  373 (456)
T 3mdm_A          299 LGRLQYLSQVLKESLRLYPPAWGT-FRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP----  373 (456)
T ss_dssp             HHHCHHHHHHHHHHHHHCCSSCCE-EEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC----
T ss_pred             HhcCHHHHHHHHHHHHhCCCcccc-ccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC----
Confidence            999999999999999999999854 799999999999999999999999999999999999999999999997641    


Q ss_pred             cCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCccccccccceeeeccCCCC
Q 036916          458 RGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       458 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  534 (538)
                       .....++|||+|+|.|+|++||++|+++++++||++|++++.++.   +..+  ....+..++.++.+++++|...
T Consensus       374 -~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~p~~~~~~~~~~r~~~  444 (456)
T 3mdm_A          374 -KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ---RFGL--QEQATLKPLDPVLCTLRPRGWQ  444 (456)
T ss_dssp             -CCSSSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC---CCCE--EESSSEEESSCCEEEEEECCC-
T ss_pred             -CCCCcccCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC---ccee--ecceEEecCCCeEEEEEEcCCC
Confidence             245689999999999999999999999999999999999998652   1233  3355778889999999999643


No 19 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=5.6e-70  Score=540.95  Aligned_cols=443  Identities=19%  Similarity=0.290  Sum_probs=328.6

Q ss_pred             CCCCC-CCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc-
Q 036916           41 TVPEP-GGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP-  118 (538)
Q Consensus        41 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~-  118 (538)
                      +.||| |+++|++||++.+.   .+++..+.+++++||+||++++++.++++|+||+++++++.+++..|+.++..... 
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~---~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~   80 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR---TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT   80 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT---TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred             CCCCCCCCCCCCccCHHHHh---hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH
Confidence            46776 88899999999886   56788999999999999999999989999999999999998776667665433211 


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALT  198 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~  198 (538)
                      ...+   .++ + .+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.        . ++ .+|+.+++..++
T Consensus        81 ~~~g---~~~-~-~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~--------~-~~-~vd~~~~~~~~~  144 (455)
T 2cib_A           81 PIFG---EGV-V-FDASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWG--------E-AG-EIDLLDFFAELT  144 (455)
T ss_dssp             HHHC--------------------------CCHHHHHHHHHHHHHHHHHHHTTCC--------S-EE-EEEHHHHHHHHH
T ss_pred             hhcC---Ccc-c-cCcHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhC--------C-CC-cEeHHHHHHHHH
Confidence            1222   122 2 36899999999998 899999999999999999988887542        1 23 799999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHH
Q 036916          199 FNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGW  278 (538)
Q Consensus       199 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (538)
                      +++++.++||.++....       +   ..+.+.+..+....  ..+...+|+   ++.. ..++..+..+.+.+++.+.
T Consensus       145 ~~vi~~~~fG~~~~~~~-------~---~~~~~~~~~~~~~~--~~~~~~~p~---l~~~-~~~~~~~~~~~~~~~~~~~  208 (455)
T 2cib_A          145 IYTSSACLIGKKFRDQL-------D---GRFAKLYHELERGT--DPLAYVDPY---LPIE-SFRRRDEARNGLVALVADI  208 (455)
T ss_dssp             HHHHHHHHTCHHHHTTC-------C---HHHHHHHHHHHTTC--CGGGGTCTT---CSCH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcchhh-------h---HHHHHHHHHHHhhh--hHHHHhccc---CCCh-hHHHHHHHHHHHHHHHHHH
Confidence            99999999999982211       1   23333333332211  112223342   2211 2344556777888888888


Q ss_pred             HHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCC-h-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHH
Q 036916          279 LEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFD-A-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVL  356 (538)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~-~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~  356 (538)
                      ++++++.....     ....|+++.|++ ..+.+   +.. . ++++..++.++++||+|||+++++|++++|++||++|
T Consensus       209 i~~r~~~~~~~-----~~~~dll~~ll~-~~~~~---~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~  279 (455)
T 2cib_A          209 MNGRIANPPTD-----KSDRDMLDVLIA-VKAET---GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY  279 (455)
T ss_dssp             HHHHHHCC----------CCCHHHHHHH-CBCTT---SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHhcccCC-----CCcccHHHHHHH-hhhhc---CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHH
Confidence            88876532210     123499999997 32221   222 3 7889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCC
Q 036916          357 KKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNI  436 (538)
Q Consensus       357 ~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~  436 (538)
                      +++++||+++++.+..++.+++.+|||++|||+|+||++|+++. ++|.+++|++++|+.|||||.|.++.+++||||++
T Consensus       280 ~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~  358 (455)
T 2cib_A          280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPED  358 (455)
T ss_dssp             HHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCccc
Confidence            99999999999877778999999999999999999999999986 58999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCcc-CccC
Q 036916          437 WEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLS-EGVG  515 (538)
Q Consensus       437 ~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~-~~~~  515 (538)
                      |+||++|+||||++....  ....+..++|||+|+|.|+|++||++|++++++.||++|++++..+  .  .++. ...+
T Consensus       359 ~~dP~~F~PeR~l~~~~~--~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~--~--~~~~~~~~~  432 (455)
T 2cib_A          359 FPDPHDFVPARYEQPRQE--DLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP--P--ESYRNDHSK  432 (455)
T ss_dssp             SSSTTSCCGGGGSTTTCH--HHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC--G--GGCCEECSS
T ss_pred             CCCccccCcccCCCCCcc--cccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC--c--ccccccccc
Confidence            999999999999975421  0112567999999999999999999999999999999999998742  1  2221 1234


Q ss_pred             ccccccccceeeeccCCCC
Q 036916          516 LTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       516 ~~~~~~~~~~~~~~~r~~~  534 (538)
                      .+..+..+++|++++|...
T Consensus       433 ~~~~p~~~~~v~~~~R~~~  451 (455)
T 2cib_A          433 MVVQLAQPAAVRYRRRTGV  451 (455)
T ss_dssp             SSCEECSCCEEEEEEC---
T ss_pred             ccccCCCCceEEEEECccc
Confidence            4556667999999999543


No 20 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=1.3e-69  Score=539.64  Aligned_cols=440  Identities=19%  Similarity=0.259  Sum_probs=352.3

Q ss_pred             CCCCCCC-cCccccccccccCCCCccchHHHHHHHhhC-CeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           41 TVPEPGG-AWPLIGHLHLLGGQKPAAHVTLGSIADKHG-PIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        41 ~~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      +.||||+ ++|++||++.+.   .+.+.++.+|+++|| +||++++++.++|+|+||+++++++.++...|+.++.....
T Consensus         3 ~~PPg~p~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~   79 (450)
T 3gw9_A            3 KLPPVYPVTVPILGHIIQFG---KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFM   79 (450)
T ss_dssp             SCCCBCCCCSTTTBTHHHHH---HCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGG
T ss_pred             CCCCCCCCCcchhccHHHHc---cCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHH
Confidence            4677754 599999999987   567889999999999 99999999999999999999999999887778776543322


Q ss_pred             -hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHH
Q 036916          119 -EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNAL  197 (538)
Q Consensus       119 -~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~  197 (538)
                       ..++.   ++++..+|+.|+++|++++ +.|+...++.+.+.+.++++.+++...       ..+++ .+|+.+++..+
T Consensus        80 ~~~~g~---~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~-------~~~~~-~vd~~~~~~~~  147 (450)
T 3gw9_A           80 VPVFGE---GVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANW-------DKDEG-EINLLEDCSTM  147 (450)
T ss_dssp             HHHHCT---TSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHS-------CSSEE-EEEHHHHHHHH
T ss_pred             HHHhcC---CcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHh-------ccCCC-cccHHHHHHHH
Confidence             22332   3345568999999999998 899999999999999999988887221       11344 79999999999


Q ss_pred             HHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHH
Q 036916          198 TFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEG  277 (538)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~  277 (538)
                      ++++++.++||.++....         ....+.+.+..+....  ......+|++.+++.. ..++..+..+.+.+++.+
T Consensus       148 ~~~~i~~~~fG~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~~-~~~~~~~~~~~~~~~~~~  215 (450)
T 3gw9_A          148 IINTACQCLFGEDLRKRL---------DARRFAQLLAKMESSL--IPAAVFLPILLKLPLP-QSARCHEARTELQKILSE  215 (450)
T ss_dssp             HHHHHHHHHSCHHHHHHS---------CHHHHHHHHHHHHHTC--CGGGGTCGGGGGSCCH-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcchhhhh---------hhHHHHHHHHHHHhcc--ccchhcccchhccCCc-hhHHHHHHHHHHHHHHHH
Confidence            999999999999882111         1234445444443322  2344567877776532 345566778888899999


Q ss_pred             HHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHH--hChH
Q 036916          278 WLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTL--NHLD  354 (538)
Q Consensus       278 ~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~--~~P~  354 (538)
                      .++++++.....    .+...|+++.|++ ..+.+   +... ++++.+++..+++||+|||+++++|++++|+  .||+
T Consensus       216 ~i~~r~~~~~~~----~~~~~d~l~~ll~-~~~~~---~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~  287 (450)
T 3gw9_A          216 IIIARKEEEVNK----DSSTSDLLSGLLS-AVYRD---GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVK  287 (450)
T ss_dssp             HHHHHHHHHHHT----SCCCCSHHHHHHH-CBCTT---SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHH
T ss_pred             HHHHHHHhhccc----CCccchHHHHHHH-hhccC---CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchh
Confidence            998877532111    1345799999998 32221   2223 7889999999999999999999999999999  9999


Q ss_pred             HHHHHHHHHHHhhcCCCCCChhhh-cccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccC
Q 036916          355 VLKKVQNELDTHIGRERQVIESDI-KNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRD  433 (538)
Q Consensus       355 ~~~~l~~Ei~~~~~~~~~~~~~~~-~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d  433 (538)
                      +|+++++|++++   ++.++.+++ .+|||++|||+|+||++|+++.. +|++++|++++|+.|||||.|.++.+++|||
T Consensus       288 ~~~~l~~Ei~~~---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d  363 (450)
T 3gw9_A          288 HLEALRKEIEEF---PAQLNYNNVMDEMPFAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHD  363 (450)
T ss_dssp             HHHHHHHHHTTC---CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred             HHHHHHHHHHhc---cCCCChHHHHHhcHHHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCC
Confidence            999999999987   456889999 99999999999999999999864 8999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCc
Q 036916          434 PNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEG  513 (538)
Q Consensus       434 ~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  513 (538)
                      |++|+||++|+|||+..         .+..++|||+|+|.|+|++||++|++++++.||++|+|+++++..   +.... 
T Consensus       364 ~~~~~dp~~F~PeR~~~---------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~-  430 (450)
T 3gw9_A          364 EEAFPEPRRWDPERDEK---------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV---PDPDY-  430 (450)
T ss_dssp             TTTSSSTTSCCTTCCCS---------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSC---CCEET-
T ss_pred             hhhcCCccccCCCcCcC---------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCC---CCCcc-
Confidence            99999999999999321         246799999999999999999999999999999999999985421   22222 


Q ss_pred             cCcccccc-ccceeeeccCC
Q 036916          514 VGLTNLKA-TPLQVLLTPRL  532 (538)
Q Consensus       514 ~~~~~~~~-~~~~~~~~~r~  532 (538)
                      .+.+..++ .++.|++++|+
T Consensus       431 ~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          431 HTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             TSSSCEECGGGCEEEEEECC
T ss_pred             ccceecCCCCceEeEeeecC
Confidence            23556666 79999999985


No 21 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=1.2e-69  Score=541.06  Aligned_cols=437  Identities=22%  Similarity=0.359  Sum_probs=324.8

Q ss_pred             CCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCc-cccc-
Q 036916           40 KTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRI-KALA-  117 (538)
Q Consensus        40 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~-~~~~-  117 (538)
                      +.+||||+++|++||++.+.   .+++.++.++++ ||+||++++++.++++|+||+++++++.++  .|..+. .... 
T Consensus        22 ~eppPgP~~~P~iG~~~~~~---~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~   95 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLA---RDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL   95 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHH---HCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred             CCCCCCCCCCCcccchHHhc---cCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH
Confidence            56799999999999999987   577889999988 999999999999999999999999999887  442222 2111 


Q ss_pred             chhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHH
Q 036916          118 PEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNAL  197 (538)
Q Consensus       118 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~  197 (538)
                      ....+  . ..++..+|+.|+++|++++ +.|+...++.+.+.+.++++.+++.+.         +++ ++|+.+++..+
T Consensus        96 ~~~~g--~-~~l~~~dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~---------~~~-~~d~~~~~~~~  161 (467)
T 3dbg_A           96 EGLLG--K-EGVATANGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQ---------PGK-TVDATSESFRV  161 (467)
T ss_dssp             -----------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSC---------TTS-CEEHHHHHHHH
T ss_pred             HHhcC--C-CCcccCCcHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhc---------cCC-cCcHHHHHHHH
Confidence            11122  1 2346678999999999998 899999999999999999998887663         244 79999999999


Q ss_pred             HHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccccccccccc--ccccccccchHHHHHHHHHHHHHH
Q 036916          198 TFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPF--LRWLDLDGIEKSMKRTAKELDQIL  275 (538)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~  275 (538)
                      ++++++.++||.++ +         .+....+.+.+..+.....   ....+|+  +.+++. ...+...+..+.+.+++
T Consensus       162 ~~~vi~~~~~g~~~-~---------~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~  227 (467)
T 3dbg_A          162 AVRVAARCLLRGQY-M---------DERAERLCVALATVFRGMY---RRMVVPLGPLYRLPL-PANRRFNDALADLHLLV  227 (467)
T ss_dssp             HHHHHHHHHSCSSC-C---------HHHHHHHHHHHHHHHHC----------------------------CCHHHHHHHH
T ss_pred             HHHHHHHHHhCCcc-c---------chhHHHHHHHHHHHHHHHH---HHhccchhhhhhCCC-hHhHHHHHHHHHHHHHH
Confidence            99999999999988 2         2223445555544443221   1223332  233322 12345556677788888


Q ss_pred             HHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChH
Q 036916          276 EGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLD  354 (538)
Q Consensus       276 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~  354 (538)
                      .+.+++++++.        +...|+++.|++ ..+.+   +... ++++.+++..+++||+|||+++++|++++|++||+
T Consensus       228 ~~~i~~r~~~~--------~~~~dll~~ll~-~~~~~---~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~  295 (467)
T 3dbg_A          228 DEIIAERRASG--------QKPDDLLTALLE-AKDDN---GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPE  295 (467)
T ss_dssp             HHHHHHHTTCC--------SSCCSHHHHHTT-C-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHhcC--------CCchHHHHHHHh-hccCC---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHH
Confidence            88888776531        245689999987 22221   1123 78899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCC
Q 036916          355 VLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDP  434 (538)
Q Consensus       355 ~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~  434 (538)
                      +|+++++|++.++++ +.++.+++.+|||+++||+|+||++|+++. ++|++.+|++++|+.|||||.|.++.+++||||
T Consensus       296 ~~~~lr~Ei~~~~~~-~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp  373 (467)
T 3dbg_A          296 HADRIRDEVEAVTGG-RPVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDP  373 (467)
T ss_dssp             HHHHHHHHHHHHHTT-SCCCHHHHTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCT
T ss_pred             HHHHHHHHHHHHhCC-CCCCHHHHhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCc
Confidence            999999999999986 678999999999999999999999999986 589999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCcc
Q 036916          435 NIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGV  514 (538)
Q Consensus       435 ~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~  514 (538)
                      ++|+||++|||+||++....   ...+..++|||+|+|.|+|++||++|++++++.||++|++++.++.     ......
T Consensus       374 ~~~~dP~~F~PeRfl~~~~~---~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~~~~~  445 (467)
T 3dbg_A          374 KSYDDNLEFDPDRWLPERAA---NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS-----NDAVRV  445 (467)
T ss_dssp             TTCTTTTCCCGGGGSHHHHT---TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-----EEEEEE
T ss_pred             hhcCCccccCCccCCCCccc---cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC-----CCccce
Confidence            99999999999999965321   1245689999999999999999999999999999999999998651     222344


Q ss_pred             CccccccccceeeeccCCC
Q 036916          515 GLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       515 ~~~~~~~~~~~~~~~~r~~  533 (538)
                      ++++.| .++.++-..|-|
T Consensus       446 ~~~~~p-~~l~~~~~~~~~  463 (467)
T 3dbg_A          446 GITLRP-HDLLVRPVARHH  463 (467)
T ss_dssp             SSSEEE-EECEEEEEECC-
T ss_pred             eeEecC-CCCccchhhhhc
Confidence            666665 588887777755


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=2.6e-68  Score=530.98  Aligned_cols=444  Identities=20%  Similarity=0.288  Sum_probs=344.1

Q ss_pred             CCCCCCCC-CCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc
Q 036916           38 DKKTVPEP-GGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL  116 (538)
Q Consensus        38 ~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~  116 (538)
                      ...+.||| |+++|++||++.+.   .+.+.++.+++++||+||++++++.+.|+|++|+.+++++.++...+..+....
T Consensus         8 ~~~~~PPg~P~~lP~iG~l~~~~---~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~   84 (461)
T 3i3k_A            8 AGVKSPPYIFSPIPFLGHAIAFG---KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS   84 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred             CCCCCCCCCCCCCCccccHHhhc---cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence            34567888 88999999999997   567899999999999999999999999999999999999988765554432211


Q ss_pred             --cchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH
Q 036916          117 --APEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF  194 (538)
Q Consensus       117 --~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~  194 (538)
                        ....++   .++.+..+|+.|+++|+++. +.|+...++.+.+.+.+++.++++.+.+         +. .+|+.+.+
T Consensus        85 ~~~~~~~g---~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~---------~~-~~dl~~~~  150 (461)
T 3i3k_A           85 RLTTPVFG---KGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE---------SG-EKNVFEAL  150 (461)
T ss_dssp             HHHHHHHC---TTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS---------EE-EEEHHHHH
T ss_pred             HhhhhhcC---CeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh---------cC-CcCHHHHH
Confidence              111222   23445667999999999998 7899999999999999999888876532         22 58999999


Q ss_pred             HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHH
Q 036916          195 NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQI  274 (538)
Q Consensus       195 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  274 (538)
                      ..+++++++.++||.++....       .+   .+.+.+..+.....  .....+|  .|++.. ..++..+..+.+.++
T Consensus       151 ~~~~~~~~~~~~~G~~~~~~~-------~~---~~~~~~~~~~~~~~--~~~~~~P--~~l~~~-~~~~~~~~~~~~~~~  215 (461)
T 3i3k_A          151 SELIILTASHCLHGKEIRSQL-------NE---KVAQLYADLDGGFS--HAAWLLP--GWLPLP-SFRRRDRAHREIKDI  215 (461)
T ss_dssp             HHHHHHHHHHHHTCHHHHHTC-------CH---HHHHHHHHHHTTSS--HHHHHSC--TTSCCH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccHhhhhHH-------HH---HHHHHHHHHHhccc--cchhhcc--cccCCH-HHHHHHHHHHHHHHH
Confidence            999999999999998872211       11   22232222221111  1111233  233221 245566777788888


Q ss_pred             HHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhCh
Q 036916          275 LEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHL  353 (538)
Q Consensus       275 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P  353 (538)
                      +.+.++++++..        +...|+++.+++ ..++   ++... ++++..++.++++||+|||+++++|++++|++||
T Consensus       216 ~~~~i~~~~~~~--------~~~~d~l~~ll~-~~~~---~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P  283 (461)
T 3i3k_A          216 FYKAIQKRRQSQ--------EKIDDILQTLLD-ATYK---DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDK  283 (461)
T ss_dssp             HHHHHHHHTTCC--------CCCCSHHHHHHT-CBCT---TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHhcc--------cccccHHHHHHH-hhhc---cCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCH
Confidence            888888765532        245689999997 3222   12223 7789999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCC-CCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhcc
Q 036916          354 DVLKKVQNELDTHIGRE-RQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHR  432 (538)
Q Consensus       354 ~~~~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~  432 (538)
                      ++|+++++|++++++.+ ..++.+++.+|||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++|+
T Consensus       284 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~  362 (461)
T 3i3k_A          284 TLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQR  362 (461)
T ss_dssp             HHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcC
Confidence            99999999999999875 356899999999999999999999999975 5899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccC
Q 036916          433 DPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSE  512 (538)
Q Consensus       433 d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  512 (538)
                      ||++|+||++|+||||++..+.   ...+..|+|||+|+|.|+|++||.+|++++++.||++|++++.++.  . +... 
T Consensus       363 d~~~~~~p~~F~P~Rfl~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~-~~~~-  435 (461)
T 3i3k_A          363 LKDSWVERLDFNPDRYLQDNPA---SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY--F-PTVN-  435 (461)
T ss_dssp             CTTTCTTTTCCCGGGGGSCCHH---HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC--C-CCBC-
T ss_pred             CcccCCCcccCCCCCCCCCCCC---CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCC--C-CCcc-
Confidence            9999999999999999976421   1245689999999999999999999999999999999999998752  1 2232 


Q ss_pred             ccCccccccccceeeeccCCC
Q 036916          513 GVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ....+..|..++.+.=.+-.|
T Consensus       436 ~~~~~~~p~~~~~~~~~~~~~  456 (461)
T 3i3k_A          436 YTTMIHTPENPVIRYKRRSTH  456 (461)
T ss_dssp             CSSSSCCBSSCEEEEEECC--
T ss_pred             cceeecCCCCceEEeeccccc
Confidence            234456677777666544333


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1.4e-66  Score=523.38  Aligned_cols=453  Identities=18%  Similarity=0.238  Sum_probs=321.3

Q ss_pred             CCCCCCCCCCc-CccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCC-cccccCccc
Q 036916           38 DKKTVPEPGGA-WPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTND-KVFCNRIKA  115 (538)
Q Consensus        38 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~-~~~~~~~~~  115 (538)
                      ...+.||||++ +|++||++.+.   .+++.++.+++++||+||++++++.++|+|+||+.+++++.+.. ..+..+...
T Consensus        10 ~~~~~pPgp~~~~P~iG~~~~~~---~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~   86 (491)
T 3dax_A           10 RQTGEPPLENGLIPYLGCALQFG---ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA   86 (491)
T ss_dssp             CCTTCCCEEEEEESCTTTTGGGT---CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHH
T ss_pred             cCCCCCCcCCCcccchhhHHHHh---hCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHH
Confidence            34457888877 89999999886   56788999999999999999999999999999999999998764 223222211


Q ss_pred             ccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH
Q 036916          116 LAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN  195 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~  195 (538)
                      .....++.+   .+...+|+.|+++|+.+. +.|+...++.+.+.+.+.+.+++......  ......+. .+++...+.
T Consensus        87 ~~~~~~g~~---~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~-~~~l~~~~~  159 (491)
T 3dax_A           87 TSAKAFGHR---SIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSS--NSKTAAWV-TEGMYSFCY  159 (491)
T ss_dssp             HHHHHHTCC---CCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC------------CCE-EEEHHHHHH
T ss_pred             HHHHHcCCC---cccccchhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccC--CcCCCCce-eccHHHHHH
Confidence            111223322   221556889999999887 68888888888777776666665543221  00011233 689999999


Q ss_pred             HHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccccccccccccc-ccccccchHHHHHHHHHHHHH
Q 036916          196 ALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLR-WLDLDGIEKSMKRTAKELDQI  274 (538)
Q Consensus       196 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~~~~~~~~~~~~~~~~~~~~~  274 (538)
                      ++++++++.++||.++ +..       ++....+.+....+..      +...+|.+. +++.. ..+...+..+.+.+.
T Consensus       160 ~~i~~~~~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~------~~~~~p~l~~~lp~~-~~~~~~~~~~~~~~~  224 (491)
T 3dax_A          160 RVMFEAGYLTIFGRDL-TRR-------DTQKAHILNNLDNFKQ------FDKVFPALVAGLPIH-MFRTAHNAREKLAES  224 (491)
T ss_dssp             HHHHHHHHHHHHCBCS-TTG-------GGHHHHHHHHHHHHHH------HHHHHHHHHTTCCGG-GSHHHHHHHHHHHHH
T ss_pred             HHHHHHhHHHHcCccc-ccc-------cchhhhhhHHHHHHHH------HHHHhHHHHHhCCHh-hhhHHHHHHHHHHHH
Confidence            9999999999999887 221       1111111121111111      122344332 22211 223333333333322


Q ss_pred             HHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChH
Q 036916          275 LEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLD  354 (538)
Q Consensus       275 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~  354 (538)
                      +   .+++.++.        +...|+++.+++...+..    ...++++.++++++++||+|||+++++|++++|++||+
T Consensus       225 ~---~~~~~~~~--------~~~~d~l~~ll~~~~~~~----~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~  289 (491)
T 3dax_A          225 L---RHENLQKR--------ESISELISLRMFLNDTLS----TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPE  289 (491)
T ss_dssp             T---SHHHHTTC--------BSCCHHHHHHHHHHHHHB----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHH
T ss_pred             H---HHHHhhcc--------cchhHHHHHHHHHHHhcC----CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHH
Confidence            2   22222211        234689999887333221    12366788889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCC----------CCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccc----cceEeCCC
Q 036916          355 VLKKVQNELDTHIGRER----------QVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTI----AGYHVPAG  420 (538)
Q Consensus       355 ~~~~l~~Ei~~~~~~~~----------~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~----~g~~ip~g  420 (538)
                      +|+++++||+++++.++          .++.+++.+|||++|||+||||++|+ +. ++|.+.+|+++    +||.||||
T Consensus       290 ~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~G  367 (491)
T 3dax_A          290 AMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKD  367 (491)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTT
T ss_pred             HHHHHHHHHHHHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCC
Confidence            99999999999987643          35899999999999999999999975 54 58999999999    78999999


Q ss_pred             CEEEEecchhccCCCCCCCCCCCCCCccCCCCCCcc------ccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhc
Q 036916          421 TRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDID------VRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHG  494 (538)
Q Consensus       421 ~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~  494 (538)
                      |.|.++.+++|+||++|+||++|+||||+++.+...      ....+..|+|||+|+|.|+|++||++|++++++.||++
T Consensus       368 t~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~  447 (491)
T 3dax_A          368 DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSY  447 (491)
T ss_dssp             CEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEechHhhcCCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999996542111      01135689999999999999999999999999999999


Q ss_pred             ceeeCCCCCCCCCCCccC-ccCc-cccccccceeeeccCCC
Q 036916          495 FEFATPGPGDTEPLDLSE-GVGL-TNLKATPLQVLLTPRLH  533 (538)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~r~~  533 (538)
                      |+|++.++.. .++++.. ..+. +..|+.++.++++.+-|
T Consensus       448 f~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~r~~~~  487 (491)
T 3dax_A          448 FELELIEGQA-KCPPLDQSRAGLGILPPLNDIEFKYKFKHH  487 (491)
T ss_dssp             EEEEETTTTC-CCCCBCGGGTBEEECCBSSCCEEEEEECCC
T ss_pred             eeEEEccCCC-CCCCCCcccccccccCCCCCceEEEEeccc
Confidence            9999976521 1233322 1233 55777888888876654


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=1.1e-66  Score=523.45  Aligned_cols=456  Identities=17%  Similarity=0.200  Sum_probs=341.6

Q ss_pred             CCCCCCCCCCCc-CccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCC-cccccCcc
Q 036916           37 TDKKTVPEPGGA-WPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTND-KVFCNRIK  114 (538)
Q Consensus        37 ~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~-~~~~~~~~  114 (538)
                      +...+.||||++ +|++||++.+.   .+++.++.+++++||+||++++++.++++|+||+++++++.++. ..+..++.
T Consensus         9 ~~~~~~PPgp~~~lPliG~~~~~~---~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~   85 (491)
T 3v8d_A            9 RRQTGEPPLENGLIPYLGCALQFG---ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF   85 (491)
T ss_dssp             CCCTTSCCEEEEEESSTTTTGGGT---CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHH
T ss_pred             ccCCCCCCCCCCCcceeccHHHHh---cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHH
Confidence            445568999998 69999999997   68899999999999999999999999999999999999997764 23333332


Q ss_pred             cccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH
Q 036916          115 ALAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF  194 (538)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~  194 (538)
                      ......++.+   .....+|+.|+++|+.+. +.|+...++.+.+.+.+++.++++.+.....  ....+. .+++.+++
T Consensus        86 ~~~~~~~g~~---~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~--~~~~~~-~~~l~~~~  158 (491)
T 3v8d_A           86 ALSAKAFGHR---SIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNS--KTAAWV-TEGMYSFC  158 (491)
T ss_dssp             HHHHHHHTCC---CCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGG--GGCSCE-EEEHHHHH
T ss_pred             HHHHHhcCCc---ccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhccc--CCCCCc-ccCHHHHH
Confidence            2233444433   234457999999999988 7999999999999999998888864422100  001233 78999999


Q ss_pred             HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHH
Q 036916          195 NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQI  274 (538)
Q Consensus       195 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  274 (538)
                      ..+++++++..+||.++ ...       ++....+.+.+..+...      .+.+|.+.+.......++..+..+.+.++
T Consensus       159 ~~~~~~~~~~~~fG~~~-~~~-------~~~~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~  224 (491)
T 3v8d_A          159 YRVMFEAGYLTIFGRDL-TRR-------DTQKAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAES  224 (491)
T ss_dssp             HHHHHHHHHHHHHCBCC-SCG-------GGHHHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCccc-ccc-------chhhhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence            99999999999999987 221       22223333333333221      12223222111122345566666666666


Q ss_pred             HHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChH
Q 036916          275 LEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLD  354 (538)
Q Consensus       275 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~  354 (538)
                      +.+.+.+++           +...|+++.++....+..    ...++++..+++.+++||++||+.+++|++++|++||+
T Consensus       225 ~~~~~~~~~-----------~~~~d~l~~l~~~~~~~~----~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~  289 (491)
T 3v8d_A          225 LRHENLQKR-----------ESISELISLRMFLNDTLS----TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPE  289 (491)
T ss_dssp             TSHHHHTTC-----------BSCCHHHHHHHHHHHHHB----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHH
T ss_pred             HHHHHHhcc-----------ccccHHHHHHHHHhhccC----CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHH
Confidence            655444322           234689999887333322    12377899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCC----------CCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccc----cceEeCCC
Q 036916          355 VLKKVQNELDTHIGRE----------RQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTI----AGYHVPAG  420 (538)
Q Consensus       355 ~~~~l~~Ei~~~~~~~----------~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~----~g~~ip~g  420 (538)
                      +|+++++||+++++.+          ..++.+++.+|||+++||+|+||++|+ + .++|.+++|+++    +|+.||||
T Consensus       290 ~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~-~~~R~~~~d~~~~~~~~g~~ip~G  367 (491)
T 3v8d_A          290 AMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-S-LNIRTAKEDFTLHLEDGSYNIRKD  367 (491)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-E-CEEEEESSSEEEECSSCEEEECTT
T ss_pred             HHHHHHHHHHHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-C-ccceeccCCeeEeecCCcEEeCCC
Confidence            9999999999998653          457889999999999999999999984 3 347999999999    99999999


Q ss_pred             CEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccc------cCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhc
Q 036916          421 TRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDV------RGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHG  494 (538)
Q Consensus       421 ~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~  494 (538)
                      +.|.++.+++|+||++|+||++|+|+||++.++....      ...+..|+|||+|+|.|+|++||.+|++++++.||++
T Consensus       368 ~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~  447 (491)
T 3v8d_A          368 DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSY  447 (491)
T ss_dssp             CEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEecchhhcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999976532110      1235789999999999999999999999999999999


Q ss_pred             ceeeCCCCCCCC-CCCccCccCccccccccceeeeccCCC
Q 036916          495 FEFATPGPGDTE-PLDLSEGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       495 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ||+++.++.... +.+.......+..|+.++.|+++=.-|
T Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~~~~~  487 (491)
T 3v8d_A          448 FELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKFKHH  487 (491)
T ss_dssp             EEEEEC---CCCCCBCGGGTBEEECCBSSCCEEEEEECSC
T ss_pred             ceEEeCCCCCCCCCCCcccCcCcccCCCCCeEEEEEeccc
Confidence            999998753221 123322233366778888888876544


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=3.9e-64  Score=506.00  Aligned_cols=452  Identities=16%  Similarity=0.173  Sum_probs=314.5

Q ss_pred             CCCCCCCCCc-CccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcc--c
Q 036916           39 KKTVPEPGGA-WPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIK--A  115 (538)
Q Consensus        39 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~--~  115 (538)
                      ..+.||||++ +|++||++.+.   .+.+.++.+|+++||+||++++|+.++|+|+||+++++++.++...++.++.  .
T Consensus        16 ~~~~PPgp~~~~P~iG~~~~~~---~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~   92 (498)
T 3b6h_A           16 RPGEPPLDLGSIPWLGYALDFG---KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIF   92 (498)
T ss_dssp             CTTCCCEECCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHH
T ss_pred             CCCCCCCCCCCCcchhhHHHhc---cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHH
Confidence            4457899887 89999999886   4578899999999999999999999999999999999999876532322221  1


Q ss_pred             ccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH
Q 036916          116 LAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN  195 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~  195 (538)
                      .....++.   + .+..+|+.|+   +++. +.|+...++.+.+.+.+.+...+......    ....+. .+++...+.
T Consensus        93 ~~~~~~g~---~-~~~~~~~~~r---r~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~----~~~~~~-~~~l~~~~~  159 (498)
T 3b6h_A           93 LMERIFDV---Q-LPHYSPSDEK---ARMK-LTLLHRELQALTEAMYTNLHAVLLGDATE----AGSGWH-EMGLLDFSY  159 (498)
T ss_dssp             HHHHTSCC---C-CTTCCHHHHH---HHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHH----HCSSCE-EEEHHHHHH
T ss_pred             HHHHHcCC---C-ccccCHHHHH---HHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccc----cCCCcc-eecHHHHHH
Confidence            11122221   1 2344566664   4444 57888888777766666666655544321    122333 689999999


Q ss_pred             HHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccc-cccccchHHHHHHHHHHHHH
Q 036916          196 ALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRW-LDLDGIEKSMKRTAKELDQI  274 (538)
Q Consensus       196 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~  274 (538)
                      .+++++++.++||.++ +...      ........+.+..+.....  .+.+.+|++.+ +......+...+..+.+.+ 
T Consensus       160 ~vi~~~~~~~~fG~~~-~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~-  229 (498)
T 3b6h_A          160 SFLLRAGYLTLYGIEA-LPRT------HESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWK-  229 (498)
T ss_dssp             HHHHHHHHHHHHCBSC-SSCC------HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhcCccc-cccc------ccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHH-
Confidence            9999999999999987 2210      1111112222222222111  12233453322 1111111122222222222 


Q ss_pred             HHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChH
Q 036916          275 LEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLD  354 (538)
Q Consensus       275 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~  354 (538)
                        .+.+++.++.        +...|+++.+++...+.    +...++++. +++.+++||+|||+++++|++++|++||+
T Consensus       230 --~~~~~~~~~~--------~~~~d~l~~ll~~~~~~----~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~  294 (498)
T 3b6h_A          230 --LLSPARLARR--------AHRSKWLESYLLHLEEM----GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPE  294 (498)
T ss_dssp             --HTCHHHHTTC--------BSCCHHHHHHHHHHHHT----TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHH
T ss_pred             --HHHHHHHhcc--------ccHHHHHHHHHHHHHhC----CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHH
Confidence              1122222111        23468999998743322    122355666 88889999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCC-------CChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccc-----cceEeCCCCE
Q 036916          355 VLKKVQNELDTHIGRERQ-------VIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTI-----AGYHVPAGTR  422 (538)
Q Consensus       355 ~~~~l~~Ei~~~~~~~~~-------~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~-----~g~~ip~g~~  422 (538)
                      +|+++++||+++++.++.       ++.+++.+|||++|||+|+||++|+ +. ++|++.+|+++     +||.|||||.
T Consensus       295 ~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~  372 (498)
T 3b6h_A          295 ALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDR  372 (498)
T ss_dssp             HHHHHHHHHHHHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCE
T ss_pred             HHHHHHHHHHHHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCE
Confidence            999999999999986542       5899999999999999999999985 54 58999999988     7899999999


Q ss_pred             EEEecch-hccCCCCCCCCCCCCCCccCCCCCCcc------ccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc
Q 036916          423 LFVNIAK-IHRDPNIWEEPNEFRPERFLTTHKDID------VRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF  495 (538)
Q Consensus       423 v~~~~~~-~~~d~~~~~~p~~f~P~R~~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~  495 (538)
                      |.++.++ +|+||++|+||++|+||||++.++...      ....+..++|||+|+|.|+|++||++|++++++.||++|
T Consensus       373 v~~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f  452 (498)
T 3b6h_A          373 LLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHL  452 (498)
T ss_dssp             EEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTE
T ss_pred             EEeCchHhhcCCccccCChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHc
Confidence            9999999 999999999999999999997542111      011356899999999999999999999999999999999


Q ss_pred             eeeCCCCCCCCCCCccC--ccCccccccccceeeeccCCCC
Q 036916          496 EFATPGPGDTEPLDLSE--GVGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       496 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~~  534 (538)
                      |+++.++.. ..+++..  ....+..++.+++|++++|.|-
T Consensus       453 ~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  492 (498)
T 3b6h_A          453 DLELINADV-EIPEFDLSRYGFGLMQPEHDVPVRYRIRPHH  492 (498)
T ss_dssp             EEEESSTTC-CCCCBCGGGTBSSBCCBSSCCEEEEEECCC-
T ss_pred             eeEeCCCCC-CCCCCCccccccccCCCCCCccEEEEecccc
Confidence            999976521 1122221  2233457778899999998764


No 26 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=4.5e-63  Score=486.48  Aligned_cols=398  Identities=15%  Similarity=0.203  Sum_probs=303.9

Q ss_pred             CCCCCCCCcCccccccc-cccCCCCccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCccccc
Q 036916           40 KTVPEPGGAWPLIGHLH-LLGGQKPAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKALA  117 (538)
Q Consensus        40 ~~~ppgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~  117 (538)
                      ++.||||+++|++|++. .+.   .+++..+.++ ++|||||++++ ++.++|+|+||++++++|.++  .|++++....
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~---~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~   98 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFA---ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST   98 (436)
T ss_dssp             ---------CCBHHHHHHHHH---HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred             ccCCCCCCccccCCCCCcccc---cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence            34689999999999986 444   4678899999 99999999997 778899999999999999876  4666543111


Q ss_pred             chh----hccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH
Q 036916          118 PEI----LGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI  193 (538)
Q Consensus       118 ~~~----~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~  193 (538)
                      ...    ... ..+ ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+       ..++ ++|+.++
T Consensus        99 ~~~~~~~~~~-~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~-~vd~~~~  167 (436)
T 2cd8_A           99 TPLTEAEAAL-NHN-MLESDPPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLA-------APDG-RADLMES  167 (436)
T ss_dssp             SCCCTTGGGT-CCS-GGGCCTTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHT-------CTTS-CEEHHHH
T ss_pred             cccccccccc-ccc-ccccCchHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-------ccCC-CcchHHH
Confidence            111    111 122 45678999999999998 8999999999999999999999988853       1244 7999997


Q ss_pred             H-HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHH
Q 036916          194 F-NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELD  272 (538)
Q Consensus       194 ~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  272 (538)
                      + ..+++++++. +||.+.           + ....+.+.+..++.   .      .+          .++..+..+.+.
T Consensus       168 ~~~~~~~~vi~~-~~G~~~-----------~-~~~~~~~~~~~~~~---~------~~----------~~~~~~~~~~~~  215 (436)
T 2cd8_A          168 LAWPLPITVISE-LLGVPE-----------P-DRAAFRVWTDAFVF---P------DD----------PAQAQTAMAEMS  215 (436)
T ss_dssp             TTTHHHHHHHHH-HHTCCG-----------G-GHHHHHHHHHHHHS---C------SS----------TTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HhCCCH-----------H-HHHHHHHHHHHHhc---c------CC----------HHHHHHHHHHHH
Confidence            7 5799999997 799876           1 11233333333221   0      00          134566777888


Q ss_pred             HHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhC
Q 036916          273 QILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNH  352 (538)
Q Consensus       273 ~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~  352 (538)
                      +++.+.+++++++          ...|+++.|++...+..   ....++++.+++.++++||+|||+++++|++++|++|
T Consensus       216 ~~~~~~i~~r~~~----------~~~d~l~~ll~~~~~~~---~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~  282 (436)
T 2cd8_A          216 GYLSRLIDSKRGQ----------DGEDLLSALVRTSDEDG---SRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH  282 (436)
T ss_dssp             HHHHHHHHHHTTS----------CCCSHHHHHHHHHHHCT---TTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcC----------CCCCHHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence            8888888877642          23589999998432211   1123888999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhcc
Q 036916          353 LDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHR  432 (538)
Q Consensus       353 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~  432 (538)
                      |++|+++++|++                  |+++||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||
T Consensus       283 P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~r  344 (436)
T 2cd8_A          283 PDQLAALRADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR  344 (436)
T ss_dssp             HHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTT
T ss_pred             HHHHHHHhhChh------------------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCC
Confidence            999999999853                  79999999999999999667999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCcc
Q 036916          433 DPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLS  511 (538)
Q Consensus       433 d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~  511 (538)
                      ||++|+||++|+||||-            ..++|||+|+|.|+|++||++|++++++.||++| ++++..+  ...+.+ 
T Consensus       345 dp~~~~dP~~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~-  409 (436)
T 2cd8_A          345 TPERFPDPHRFDIRRDT------------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVS--PGELVW-  409 (436)
T ss_dssp             CTTTSSSTTSCCTTSCC------------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSC--GGGCCB-
T ss_pred             CcccCCCccccCCCCCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCC--Ccccee-
Confidence            99999999999999961            3579999999999999999999999999999999 6998643  111222 


Q ss_pred             CccCccccccccceeeeccCCC
Q 036916          512 EGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                       ..+.......++.|++++|++
T Consensus       410 -~~~~~~~~~~~l~v~~~~r~~  430 (436)
T 2cd8_A          410 -YPNPMIRGLKALPIRWRRGRE  430 (436)
T ss_dssp             -CCCTTBCCBSCCEEC------
T ss_pred             -ccCcccCCcceeEEEEecCcc
Confidence             234445667899999999865


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=4.3e-63  Score=495.77  Aligned_cols=440  Identities=20%  Similarity=0.264  Sum_probs=301.0

Q ss_pred             CCCCCCCCCc-CccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcc--c
Q 036916           39 KKTVPEPGGA-WPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIK--A  115 (538)
Q Consensus        39 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~--~  115 (538)
                      ..+.||||++ +|++||++.+.   .+++.++.+|+++||+||++++++.++++|+||+++++++.++.. ++.++.  .
T Consensus        16 ~~~~pPgp~~~~P~iG~~~~~~---~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~   91 (475)
T 3b98_A           16 RRNEPPLDKGMIPWLGHALEFG---KDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQV   91 (475)
T ss_dssp             CTTCCCEECCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHH
T ss_pred             CCCCCCCCCCCcchHHhHHHHh---hCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHH
Confidence            3457899887 99999999886   467899999999999999999999999999999999999987642 322211  1


Q ss_pred             ccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH
Q 036916          116 LAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN  195 (538)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~  195 (538)
                      .....++.   + .+..+|+.|   |+++. +.|+...++.+.+.+.+++..+++.+...   ....... .+++...+.
T Consensus        92 ~~~~~~g~---~-~~~~~~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~~~~~  159 (475)
T 3b98_A           92 LMKRIFNM---I-LPSHNPESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMG---LKTSEWK-KDGLFNLCY  159 (475)
T ss_dssp             HHHHTTCC---C-CTTCCHHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTT---CSSCSCE-EEEHHHHHH
T ss_pred             HHHHHhCC---C-CCCCChHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccc---cCCCCce-eehHHHHHH
Confidence            11122221   2 234456655   56665 68899999999888888887777654321   0011222 578888888


Q ss_pred             HHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHH
Q 036916          196 ALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQIL  275 (538)
Q Consensus       196 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~  275 (538)
                      .+++++++...||.+. ..        .+....+.+.+..+.         +.+|++.+....   ....+......+.+
T Consensus       160 ~~~~~~~~~~~~g~~~-~~--------~~~~~~~~~~~~~~~---------~~~p~l~~~~~~---~~~~~~~~~~~~~~  218 (475)
T 3b98_A          160 SLLFKTGYLTVFGAEN-NN--------SAALTQIYEEFRRFD---------KLLPKLARTTVN---KEEKQIASAAREKL  218 (475)
T ss_dssp             HHHHHHHHHHHHCCTT-SC--------HHHHHHHHHHHHHHH---------HHHHHHHTTCCC---HHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhheeCCcc-cc--------chhcHHHHHHHHHHH---------hhhHHHHHHhcC---hhhhHHHHHHHHHH
Confidence            8888888888888542 11        222222322222211         123322111000   01111122222222


Q ss_pred             HHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHH
Q 036916          276 EGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDV  355 (538)
Q Consensus       276 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~  355 (538)
                      .+.+.+.   ....    .+...|+++.+++...+.    +...++++. +++.+++||+|||+++++|++++|++||++
T Consensus       219 ~~~~~~~---~~~~----~~~~~d~l~~ll~~~~~~----~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~  286 (475)
T 3b98_A          219 WKWLTPS---GLDR----KPREQSWLGSYVKQLQDE----GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEA  286 (475)
T ss_dssp             HHHHSCT---TSCC----CCCTTSHHHHHHHHHHHT----TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHH---Hhhc----cccccHHHHHHHHHHHHc----CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHH
Confidence            2222111   1110    124568999999743322    223366777 889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccc-----cceEeCCCCEEEEecch-
Q 036916          356 LKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTI-----AGYHVPAGTRLFVNIAK-  429 (538)
Q Consensus       356 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~-----~g~~ip~g~~v~~~~~~-  429 (538)
                      |+++++|++  .+ +..++.+++.+|||++|||+|+||++|+ +. ++|.+++|+++     +||.|||||.|.++.++ 
T Consensus       287 ~~~l~~Ei~--~~-~~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~  361 (475)
T 3b98_A          287 LRAVREEIQ--GG-KHLRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFIS  361 (475)
T ss_dssp             HHHHHHHHC---------------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCC
T ss_pred             HHHHHHHHh--cC-CCCCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHH
Confidence            999999999  23 2356899999999999999999999986 54 58999999999     89999999999999999 


Q ss_pred             hccCCCCCCCCCCCCCCccCCCCCCcc------ccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCC
Q 036916          430 IHRDPNIWEEPNEFRPERFLTTHKDID------VRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPG  503 (538)
Q Consensus       430 ~~~d~~~~~~p~~f~P~R~~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~  503 (538)
                      +||||++|+||++||||||++.++...      ....+..++|||+|+|.|+|++||++|++++++.||++|++++.++.
T Consensus       362 ~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  441 (475)
T 3b98_A          362 PQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKN  441 (475)
T ss_dssp             CCTCTTTSSSTTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTT
T ss_pred             hcCChhhcCCcccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCC
Confidence            999999999999999999996542110      01135689999999999999999999999999999999999997652


Q ss_pred             CCCCCCccC--ccCccccccccceeeeccCCC
Q 036916          504 DTEPLDLSE--GVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       504 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      . .++++..  ....+..++.++++++++|+.
T Consensus       442 ~-~~~~~~~~~~~~~~~~p~~~~~~~~~~R~~  472 (475)
T 3b98_A          442 A-TVPLVDPSRYGFGILQPAGDLEIRYRIRFH  472 (475)
T ss_dssp             C-CCCCBCGGGTBEEECCBSSCCEEEEEEC--
T ss_pred             C-CCCCCCcccccccccCCCCCceEEEEeccc
Confidence            1 1123222  222356677899999999864


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=8.1e-62  Score=476.72  Aligned_cols=401  Identities=16%  Similarity=0.233  Sum_probs=311.3

Q ss_pred             CccccccccccCCCCccchHHHHHHHhhC-CeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc--c-chhhccC
Q 036916           49 WPLIGHLHLLGGQKPAAHVTLGSIADKHG-PIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL--A-PEILGYN  124 (538)
Q Consensus        49 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~--~-~~~~~~~  124 (538)
                      .|++||+..+.   .+++.++++++++|| |||++++++.++|+++||++++.++. . ..|+......  . ...++. 
T Consensus         8 ~P~lG~~~~~~---~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~-   81 (417)
T 1izo_A            8 DKSLDNSLTLL---KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGV-   81 (417)
T ss_dssp             CCCTTHHHHHH---HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCT-
T ss_pred             CCccchHHHHh---hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhccc-
Confidence            38999999987   578899999999998 99999988889999999999986554 3 3354332211  1 112221 


Q ss_pred             CCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHHHHHHH
Q 036916          125 YAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTFNVATR  204 (538)
Q Consensus       125 ~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~~~i~~  204 (538)
                        ..++..+|+.|+++|++++ +.|+...++.+.+.+.+.++++++.+.+         ++ ++|+.+++..+++++++.
T Consensus        82 --~~l~~~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~dl~~~~~~~~~~vi~~  148 (417)
T 1izo_A           82 --NAIQGMDGSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK---------AD-EVVLFEEAKEILCRVACY  148 (417)
T ss_dssp             --TCGGGCCHHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT---------SS-EEEHHHHHHHHHHHHHHH
T ss_pred             --cceeecCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc---------CC-CeeHHHHHHHHHHHHHHH
Confidence              2346778999999999998 8999999999999999999998887632         34 799999999999999999


Q ss_pred             HHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 036916          205 MVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQ  284 (538)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  284 (538)
                      + ||.++ +..         ....+.+.+..++.....     ..|         ......+..+.+.+++.++++++++
T Consensus       149 ~-~G~~~-~~~---------~~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~  203 (417)
T 1izo_A          149 W-AGVPL-KET---------EVKERADDFIDMVDAFGA-----VGP---------RHWKGRRARPRAEEWIEVMIEDARA  203 (417)
T ss_dssp             H-HTCCC-CTT---------THHHHHHHHHHHHHHTTC-----CSH---------HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             H-cCCCC-Cch---------HHHHHHHHHHHHHhhccc-----CCc---------cchhHHHHHHHHHHHHHHHHHHHHh
Confidence            8 69887 221         123344433333332110     111         1234556777888899999988776


Q ss_pred             hccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHH
Q 036916          285 KRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNEL  363 (538)
Q Consensus       285 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei  363 (538)
                      +...      ....|+++.|++ ..+.   ++... ++++..++.. ++||++||+++++|++++|++||++|+++++| 
T Consensus       204 ~~~~------~~~~d~l~~ll~-~~~~---~g~~l~~~~~~~~~~~-~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-  271 (417)
T 1izo_A          204 GLLK------TTSGTALHEMAF-HTQE---DGSQLDSRMAAIELIN-VLRPIVAISYFLVFSALALHEHPKYKEWLRSG-  271 (417)
T ss_dssp             TSSC------CCTTSHHHHHHH-CBCT---TSCBCCHHHHHHHHHH-HHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-
T ss_pred             hccC------CCcCCHHHHHHH-hccc---cCCCCCHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-
Confidence            4321      234689999987 3222   12223 5566655554 55999999999999999999999999999997 


Q ss_pred             HHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCC
Q 036916          364 DTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEF  443 (538)
Q Consensus       364 ~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f  443 (538)
                                      ++||+++||+|+||++|+++. ++|++.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus       272 ----------------~~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F  334 (417)
T 1izo_A          272 ----------------NSREREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEF  334 (417)
T ss_dssp             ----------------CHHHHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred             ----------------CCHHHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCcccc
Confidence                            468999999999999999997 589999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCCccccCCCCccccCCCC----CCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCcccc
Q 036916          444 RPERFLTTHKDIDVRGQNFELIPFGSG----RRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGLTNL  519 (538)
Q Consensus       444 ~P~R~~~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (538)
                      +|+||++..      ..+..++|||+|    +|.|+|++||++|++++++.||++|+++++++  .  ..+. ...++..
T Consensus       335 ~P~R~~~~~------~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~--~--~~~~-~~~~~~~  403 (417)
T 1izo_A          335 RPERFAERE------ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ--S--LHYS-LARMPSL  403 (417)
T ss_dssp             CGGGGTTCC------CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSC--C--CCCC-SSSSSCC
T ss_pred             ChhhcCCCC------CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCC--C--cCcc-cccCCCC
Confidence            999999653      245689999999    59999999999999999999999999998764  1  1221 2345677


Q ss_pred             ccccceeeeccCCC
Q 036916          520 KATPLQVLLTPRLH  533 (538)
Q Consensus       520 ~~~~~~~~~~~r~~  533 (538)
                      |+.++.|++++|.+
T Consensus       404 p~~~~~~~~~~r~~  417 (417)
T 1izo_A          404 PESGFVMSGIRRKS  417 (417)
T ss_dssp             CTTCCEEEEEEEC-
T ss_pred             CCCCceEeeeeCCC
Confidence            88899999998863


No 29 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=3e-61  Score=469.74  Aligned_cols=386  Identities=17%  Similarity=0.248  Sum_probs=303.7

Q ss_pred             CCCCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEE----c-CC-cceEEecCHHHHHHHH-hhCCccccc
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIK----L-GM-HRALIVSNWEIAKECF-TTNDKVFCN  111 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~----~-~~-~~~v~v~dpe~~~~il-~~~~~~~~~  111 (538)
                      ..++||||+++|+.     +.   .+++..+.+| ++||+||+++    + ++ .++|+|+||++++++| .++  .+++
T Consensus         8 ~~~lppgp~~~p~~-----~~---~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~   76 (406)
T 1ued_A            8 VAPLLREPANFQLR-----TN---CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTT   76 (406)
T ss_dssp             CCCEEECCTTTTCE-----ET---TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEEC
T ss_pred             CCCCcccCcccCCC-----CC---CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccc
Confidence            45678999999876     33   5778899999 9999999999    6 77 8999999999999999 554  2444


Q ss_pred             Ccccccc--hhh-cc-CCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCcc
Q 036916          112 RIKALAP--EIL-GY-NYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKAL  187 (538)
Q Consensus       112 ~~~~~~~--~~~-~~-~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~  187 (538)
                      ++.....  ... .. ... .++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+...        |+ +
T Consensus        77 ~~~~~~~~~~~~~~~~~~~-~l~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~  145 (406)
T 1ued_A           77 RPQFTQSKSGAHVEAQFVG-QISTYDPPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEAE--------GP-S  145 (406)
T ss_dssp             CCCC---------CGGGTT-CGGGCCTTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHHH--------CT-T
T ss_pred             ccccccccccccccccccc-ccccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-C
Confidence            4331111  111 00 112 245678999999999998 89999999999999999999999988643        44 7


Q ss_pred             ccHHHHHHH-HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHH
Q 036916          188 VEMKEIFNA-LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKR  266 (538)
Q Consensus       188 vdl~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~  266 (538)
                      +|+.+++.. +++++++ .+||.+.           + ....+.+.+..++..        .          ...+...+
T Consensus       146 ~d~~~~~~~~~~~~vi~-~~~G~~~-----------~-~~~~~~~~~~~~~~~--------~----------~~~~~~~~  194 (406)
T 1ued_A          146 ADLQGLFADPVGAHALC-ELLGIPR-----------D-DQREFVRRIRRNADL--------S----------RGLKARAA  194 (406)
T ss_dssp             EEHHHHTHHHHHHHHHH-HHHTCCH-----------H-HHHHHHHHHHHCC---------------------CCHHHHHH
T ss_pred             eeHHHHHHHHhHHHHHH-HHcCCCH-----------H-HHHHHHHHHHHHHhc--------c----------CCHHHHHH
Confidence            999998875 9999999 5799876           2 122333332222110        0          01245667


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHH
Q 036916          267 TAKELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWAL  346 (538)
Q Consensus       267 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l  346 (538)
                      ..+.+.+++.+.++++++.          ...|+++.|++..  +.    ...++++.+++.++++||+|||+++++|++
T Consensus       195 ~~~~~~~~~~~~i~~r~~~----------~~~d~l~~ll~~~--~~----~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l  258 (406)
T 1ued_A          195 DSAAFNRYLDNLLARQRAD----------PDDGLLGMIVRDH--GD----NVTDEELKGLCTALILGGVETVAGMIGFGV  258 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHHH--GG----GSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHhc--CC----CCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            7778888888888887652          2358999999833  11    123788999999999999999999999999


Q ss_pred             HHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEe
Q 036916          347 TLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVN  426 (538)
Q Consensus       347 ~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~  426 (538)
                      ++|++||++|+++++|++                  |+++||+|+||++|+++..++|++++|++++|+.|||||.|.++
T Consensus       259 ~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~  320 (406)
T 1ued_A          259 LALLDNPGQIELLFESPE------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCS  320 (406)
T ss_dssp             HHHHHSGGGTTHHHHCHH------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEEC
T ss_pred             HHHHhChHHHHHHHhCHH------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEec
Confidence            999999999999999865                  69999999999999999767999999999999999999999999


Q ss_pred             cchhccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCC
Q 036916          427 IAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDT  505 (538)
Q Consensus       427 ~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~  505 (538)
                      .+++||||++|+||++|+||||-            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  .
T Consensus       321 ~~~~~rdp~~~~dp~~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~  386 (406)
T 1ued_A          321 ILMANRDEALTPDPDVLDANRAA------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVP--I  386 (406)
T ss_dssp             HHHHTTCTTTSSSTTSCCTTSCC------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--G
T ss_pred             HHHhcCCchhCCChhhcCCCCCC------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCC--c
Confidence            99999999999999999999981            3579999999999999999999999999999999 7998753  1


Q ss_pred             CCCCccCccCccccccccceeee
Q 036916          506 EPLDLSEGVGLTNLKATPLQVLL  528 (538)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~  528 (538)
                      .  ++....+.+..+ .++.|++
T Consensus       387 ~--~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          387 E--EVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             G--GCCBCCSSSCCB-SCCEEEC
T ss_pred             c--cccccccccccC-CeeeeeC
Confidence            1  222334455566 7777653


No 30 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=1.1e-60  Score=466.77  Aligned_cols=374  Identities=15%  Similarity=0.173  Sum_probs=294.4

Q ss_pred             CCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcC-CcceEEecCHHHHHHHHhhCC-cccccCcccccch
Q 036916           42 VPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLG-MHRALIVSNWEIAKECFTTND-KVFCNRIKALAPE  119 (538)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~-~~~~v~v~dpe~~~~il~~~~-~~~~~~~~~~~~~  119 (538)
                      .||||+++|++|++..      +++..+.+|. +||||+++.++ +.+.++|++++.+++++.++. ..+..++......
T Consensus         2 ~pPGp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~   74 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS   74 (404)
T ss_dssp             ----CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred             CCCCCCCCCCCCCcCC------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence            5899999999999763      5677888886 69999999874 566778999999999998763 2233333221111


Q ss_pred             h----hccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH
Q 036916          120 I----LGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN  195 (538)
Q Consensus       120 ~----~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~  195 (538)
                      .    ...+.. .++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.     ..+++ ++|+.+.+.
T Consensus        75 ~~~~~~~~~~~-~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~~~-~~d~~~~~~  146 (404)
T 1jfb_A           75 ASGKQAAKAKP-TFVDMDPPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQK-----GCANG-PVDLVKEFA  146 (404)
T ss_dssp             HHHHHHTTSCC-CGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHH-----CSTTS-CEEHHHHTT
T ss_pred             ccccchhcccC-cccccCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCC-CccHHHHHH
Confidence            0    111222 345668999999999998 89999999999999999999999999765     33445 799999999


Q ss_pred             HHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHH
Q 036916          196 ALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQIL  275 (538)
Q Consensus       196 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~  275 (538)
                      ..+.++++..+||.++ +         +.   .+.+.......           .   +.   ...+...+..+.+.+++
T Consensus       147 ~~~~~~i~~~~~G~~~-~---------~~---~~~~~~~~~~~-----------~---~~---~~~~~~~~~~~~~~~~~  196 (404)
T 1jfb_A          147 LPVPSYIIYTLLGVPF-N---------DL---EYLTQQNAIRT-----------N---GS---STAREASAANQELLDYL  196 (404)
T ss_dssp             THHHHHHHHHHHTCCG-G---------GH---HHHHHHHHHHH-----------C---TT---SCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCH-H---------HH---HHHHHHHHHHh-----------c---cC---cchHHHHHHHHHHHHHH
Confidence            9999999999999887 1         11   11111111110           0   00   11345566777888888


Q ss_pred             HHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHH
Q 036916          276 EGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDV  355 (538)
Q Consensus       276 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~  355 (538)
                      .+.+++++++          ...|+++.|++.. ..   .+...++++.+++..+++||+|||+++++|++++|++||++
T Consensus       197 ~~~i~~r~~~----------~~~d~l~~ll~~~-~~---~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~  262 (404)
T 1jfb_A          197 AILVEQRLVE----------PKDDIISKLCTEQ-VK---PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQ  262 (404)
T ss_dssp             HHHHHHHHHS----------CCSSHHHHHHHHT-TT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHhC----------CCCcHHHHHHHhh-cc---CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH
Confidence            8888877652          2358999999632 21   11123788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCC
Q 036916          356 LKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPN  435 (538)
Q Consensus       356 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~  435 (538)
                      |++++++                  .+|++|||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||||+
T Consensus       263 ~~~l~~~------------------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~  324 (404)
T 1jfb_A          263 LAQLKAN------------------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEE  324 (404)
T ss_dssp             HHHHHHC------------------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTT
T ss_pred             HHHHHhC------------------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCch
Confidence            9999982                  2699999999999999999667999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          436 IWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       436 ~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                      +|+||++|+||||++..          .++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus       325 ~~~dP~~F~PeRf~~~~----------~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          325 VFENPDEFNMNRKWPPQ----------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             TSSSTTSCCTTCCCCSS----------CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             hCCChhhcCCCCCCCCC----------CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence            99999999999987532          489999999999999999999999999999999 7998654


No 31 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=2.3e-60  Score=466.18  Aligned_cols=401  Identities=15%  Similarity=0.207  Sum_probs=308.5

Q ss_pred             CCCCCcCccccccccccCCCCccchHHHHHHHhh-CCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc--c-c
Q 036916           43 PEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKH-GPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL--A-P  118 (538)
Q Consensus        43 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~--~-~  118 (538)
                      ||||   |++||+..+.   .+++.++.+++++| ||||++++++.+++++++|+.++ ++.+. ..|+.++...  . .
T Consensus         4 pPg~---P~iG~~~~~~---~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~   75 (415)
T 3awm_A            4 TPHT---KGPDETLSLL---ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQK   75 (415)
T ss_dssp             --------CCCCHHHHH---HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHT
T ss_pred             CCCC---CccchHHHHH---hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhh
Confidence            5665   8999999886   56788999999999 79999998888999999999997 66554 3455433211  1 1


Q ss_pred             hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHH
Q 036916          119 EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALT  198 (538)
Q Consensus       119 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~  198 (538)
                      ..++  . ..++..+|+.|+++|+++. +.|+...++.+.+.+.+.++++++.+.+.         + ++|+.+++..++
T Consensus        76 ~~~g--~-~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~~---------~-~vdl~~~~~~~~  141 (415)
T 3awm_A           76 TLLG--Q-GGVQGLDGETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTRK---------G-EIVFYDELHEPL  141 (415)
T ss_dssp             TTSC--S-SSGGGCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHHH---------S-EEEHHHHHHHHH
T ss_pred             hccC--C-cceeecCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhccC---------C-cEeHHHHHHHHH
Confidence            1122  1 2246778999999999998 89999999999999999999999988643         2 799999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHH
Q 036916          199 FNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGW  278 (538)
Q Consensus       199 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (538)
                      +++++.+ ||.++ +.         .....+.+.+..+.....     ...|         ...+..+..+.+.+++.+.
T Consensus       142 ~~vi~~~-~G~~~-~~---------~~~~~~~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~  196 (415)
T 3awm_A          142 TRAVCAW-AGVPL-PD---------DEAGNRAGELRALFDAAG-----SASP---------RHLWSRLARRRVDAWAKRI  196 (415)
T ss_dssp             HHHHHHH-HTCCC-CG---------GGHHHHHHHHHHHHHSTT-----CSSH---------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-cCCCC-Cc---------chHHHHHHHHHHHHHHhc-----ccCc---------hHHHHHHHHHHHHHHHHHH
Confidence            9999998 89887 21         112233333333222110     0001         1234566777888899999


Q ss_pred             HHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHH
Q 036916          279 LEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLK  357 (538)
Q Consensus       279 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~  357 (538)
                      +++++++...      ....|+++.|+. ..+.   ++... ++++..++.. ++||++||+++++|++++|++||++|+
T Consensus       197 i~~r~~~~~~------~~~~d~l~~ll~-~~~~---~g~~~~~~~~~~~~~~-~~ag~~tt~~~l~~~l~~L~~~P~~~~  265 (415)
T 3awm_A          197 IEGIRAGSIG------SGSGTAAYAIAW-HRDR---HDDLLSPHVAAVELVN-VLRPTVAIAVYITFVAHALQTCSGIRA  265 (415)
T ss_dssp             HHHHHHTSSC------CCTTSHHHHHHH-CBCT---TSCBCCHHHHHHHHHH-HHHHHHTHHHHHHHHHHHHHHSTTHHH
T ss_pred             HHHHHHhhhc------CCCCCHHHHHHh-hhhc---cCCCCCHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHhChHHHH
Confidence            9887764321      234689999987 3222   12223 5566666554 559999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCC
Q 036916          358 KVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIW  437 (538)
Q Consensus       358 ~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~  437 (538)
                      ++++|                  +||+++||+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|
T Consensus       266 ~l~~e------------------~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~  326 (415)
T 3awm_A          266 ALVQQ------------------PDYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW  326 (415)
T ss_dssp             HHHHC------------------TTHHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHH
T ss_pred             HHHHH------------------HHHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCcccc
Confidence            99996                  57999999999999999997 589999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccCCCCCCccccCCCCccccCCCC----CCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCc
Q 036916          438 EEPNEFRPERFLTTHKDIDVRGQNFELIPFGSG----RRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEG  513 (538)
Q Consensus       438 ~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  513 (538)
                      +||++|+|+||++..      ..+..++|||+|    +|.|+|++||++|++++++.||++|+++++++  .  ..+. .
T Consensus       327 ~dp~~F~P~R~~~~~------~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--~--~~~~-~  395 (415)
T 3awm_A          327 ADPQEFRPERFRAWD------EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ--D--LSID-F  395 (415)
T ss_dssp             SSTTSCCGGGGGGCC------CCSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSC--C--CCBC-T
T ss_pred             CCccccChhhcCCCC------CCCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCC--C--CCcC-c
Confidence            999999999999653      145689999999    59999999999999999999999999998654  1  1221 2


Q ss_pred             cCccccccccceeeeccC
Q 036916          514 VGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       514 ~~~~~~~~~~~~~~~~~r  531 (538)
                      ..++..|+.++.+++++.
T Consensus       396 ~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          396 ARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             TSSSCCBTTCCEEEEEES
T ss_pred             CCCccccCCCceEEEEeC
Confidence            346677888999999864


No 32 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.5e-61  Score=469.73  Aligned_cols=382  Identities=20%  Similarity=0.243  Sum_probs=296.2

Q ss_pred             CCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCc-cccc-chhhcc
Q 036916           46 GGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRI-KALA-PEILGY  123 (538)
Q Consensus        46 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~-~~~~-~~~~~~  123 (538)
                      +..+|++||++.+.   .+++.++.+++++|||||+ ++++.++++|+||+++++++.++  .|++++ .... ....+ 
T Consensus         4 ~~~~p~iGnl~~~~---~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g-   76 (389)
T 1n97_A            4 LSLREAWPYLKDLQ---QDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG-   76 (389)
T ss_dssp             CCHHHHHHHHHHHH---HCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC-
T ss_pred             cccccccccHHHHh---hChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC-
Confidence            44589999999886   4678899999999999999 88888999999999999999877  676654 2111 12222 


Q ss_pred             CCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHHHHHH
Q 036916          124 NYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTFNVAT  203 (538)
Q Consensus       124 ~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~~~i~  203 (538)
                        .+ ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.          ++ ++|+.+++..+++++++
T Consensus        77 --~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----------~~-~~dl~~~~~~~~~~vi~  141 (389)
T 1n97_A           77 --RG-LLTDWGESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR----------GE-ERDLDHEMLALSLRLLG  141 (389)
T ss_dssp             --SS-TTTCCHHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC----------SC-CEEHHHHHHHHHHHHHH
T ss_pred             --Cc-cccCCcHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc----------CC-cCcHHHHHHHHHHHHHH
Confidence              22 35568999999999998 899999999999999999988886552          34 79999999999999999


Q ss_pred             HHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 036916          204 RMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHK  283 (538)
Q Consensus       204 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  283 (538)
                      .++||.++           ++   .+.+.+..+...... .   .++.+.|++.. ..++..+..+.+.+++.+.++++ 
T Consensus       142 ~~~fG~~~-----------~~---~~~~~~~~~~~~~~~-~---~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~i~~r-  201 (389)
T 1n97_A          142 RALFGKPL-----------SP---SLAEHALKALDRIMA-Q---TRSPLALLDLA-AEARFRKDRGALYREAEALIVHP-  201 (389)
T ss_dssp             HHHHSSCC-----------CH---HHHHHHHHHHHHHHH-H---HHCGGGGGCHH-HHHHHHHHHHHHHHHHGGGTTST-
T ss_pred             HHHcCCcc-----------hH---HHHHHHHHHHHHHHH-H---HhhHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHH-
Confidence            99999988           21   334444443332211 0   11112333211 12223333333333333222211 


Q ss_pred             hhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHH
Q 036916          284 QKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNEL  363 (538)
Q Consensus       284 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei  363 (538)
                                          ++.    .      ..++++.+++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus       202 --------------------ll~----~------l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~  251 (389)
T 1n97_A          202 --------------------PLS----H------LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESE  251 (389)
T ss_dssp             --------------------TGG----G------SCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCH
T ss_pred             --------------------hcc----c------CCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence                                121    0      1277889999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCC
Q 036916          364 DTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEF  443 (538)
Q Consensus       364 ~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f  443 (538)
                      +.+.                  +||+|+||++|+++.. +|.+++|++++|+.|||||.|.++.+++|||  +|+||++|
T Consensus       252 ~~~~------------------a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F  310 (389)
T 1n97_A          252 EAAL------------------AAFQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAF  310 (389)
T ss_dssp             HHHH------------------HHHHHHHHHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSC
T ss_pred             HHHH------------------HHHHHHHhcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCcccc
Confidence            9753                  9999999999999975 9999999999999999999999999999999  99999999


Q ss_pred             CCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcceeeCCCCCCCCCCCccCccCcccccccc
Q 036916          444 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGPGDTEPLDLSEGVGLTNLKATP  523 (538)
Q Consensus       444 ~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (538)
                      +||||+++.     ...+..++|||+|+|.|+|++||++|++++++.||++|++++.++  .. +    ..+.+..+..+
T Consensus       311 ~PeR~l~~~-----~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~--~~-~----~~~~~~~p~~~  378 (389)
T 1n97_A          311 RPERFLEER-----GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPF--PR-V----LAQVTLRPEGG  378 (389)
T ss_dssp             CTTHHHHSC-----CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCC--CC-E----EESSSEEETTC
T ss_pred             CCccCCCCC-----CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCC--Cc-c----cceEEeeeCCC
Confidence            999998641     124568999999999999999999999999999999999998764  22 1    34667777789


Q ss_pred             ceeeeccCC
Q 036916          524 LQVLLTPRL  532 (538)
Q Consensus       524 ~~~~~~~r~  532 (538)
                      ++|++++|.
T Consensus       379 ~~v~~~~~~  387 (389)
T 1n97_A          379 LPARPREEV  387 (389)
T ss_dssp             CEECCBC--
T ss_pred             ceEEEeecc
Confidence            999998874


No 33 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.9e-60  Score=467.77  Aligned_cols=407  Identities=16%  Similarity=0.195  Sum_probs=304.2

Q ss_pred             CCCCCCCCCcCccccccccccCC-C-CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCcc-
Q 036916           39 KKTVPEPGGAWPLIGHLHLLGGQ-K-PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIK-  114 (538)
Q Consensus        39 ~~~~ppgp~~~p~~G~~~~~~~~-~-~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~-  114 (538)
                      ...+|||     ++|++...... . .+++..+.++.+ ||||++++. |+.++++|++++++++++++. ..|++++. 
T Consensus         4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~   76 (428)
T 1cpt_A            4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS   76 (428)
T ss_dssp             TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred             ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence            3456777     88976544211 1 246778888876 799999998 678999999999999999765 46777664 


Q ss_pred             cccc-----h-h---hcc--CCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCC
Q 036916          115 ALAP-----E-I---LGY--NYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDS  183 (538)
Q Consensus       115 ~~~~-----~-~---~~~--~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~  183 (538)
                      ....     . .   .+.  .....++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+        .
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~  147 (428)
T 1cpt_A           77 EILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD--------F  147 (428)
T ss_dssp             SSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT--------S
T ss_pred             ccCCcccccchhccccccccccccccccCChHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH--------h
Confidence            2221     1 2   221  1112345668999999999998 8999999999999999999999988753        1


Q ss_pred             CCccccHHHH-HHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchH
Q 036916          184 GKALVEMKEI-FNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEK  262 (538)
Q Consensus       184 g~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~  262 (538)
                      ++ .+|+... ...+++++|+.+ ||.+. +          . ...+.+....+.....  .....+|++.+++ ....+
T Consensus       148 ~~-~~d~~~~~~~~~~~~vi~~~-fG~~~-~----------~-~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~-~~~~~  210 (428)
T 1cpt_A          148 DG-ECDFMTDCALYYPLHVVMTA-LGVPE-D----------D-EPLMLKLTQDFFGVHE--PDEQAVAAPRQSA-DEAAR  210 (428)
T ss_dssp             SS-EEEHHHHTTTTHHHHHHHHH-HTCCG-G----------G-HHHHHHHHHTTTCC-------------------CHHH
T ss_pred             CC-CeehHHHHHhhhHHHHHHHH-cCCCH-h----------H-HHHHHHHHHHHHhccc--ccccccccccccc-hhhHH
Confidence            24 7999855 467999999999 99987 1          1 1223332222211100  1112234433321 12234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHH
Q 036916          263 SMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFT  341 (538)
Q Consensus       263 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~  341 (538)
                      +..+..+.+.+++.+.+++++++          ...|+++.|++ ..+    ++... ++++..++.++++||+|||+++
T Consensus       211 ~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll~~ll~-~~~----~~~~ls~~ei~~~~~~l~~AG~eTta~~  275 (428)
T 1cpt_A          211 RFHETIATFYDYFNGFTVDRRSC----------PKDDVMSLLAN-SKL----DGNYIDDKYINAYYVAIATAGHDTTSSS  275 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTS----------CCSSHHHHHHH-CBS----SSSBCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC----------CCCcHHHHHHh-ccc----cCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            56677778888888888877641          23589999997 322    12223 7889999999999999999999


Q ss_pred             HHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCC
Q 036916          342 LTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGT  421 (538)
Q Consensus       342 l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~  421 (538)
                      ++|++++|++||++|+++++|++                  |+++||+|+||++|+++. ++|++++|++++|+.|||||
T Consensus       276 l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt  336 (428)
T 1cpt_A          276 SGGAIIGLSRNPEQLALAKSDPA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGD  336 (428)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHHHHhCHHHHHHHHHhHH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCC
Confidence            99999999999999999999975                  799999999999999985 59999999999999999999


Q ss_pred             EEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCC
Q 036916          422 RLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATP  500 (538)
Q Consensus       422 ~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~  500 (538)
                      .|.++.+++||||++|+||++|+||||.+            .++|||+|+|.|+|++||++|++++++.||++|+ +++.
T Consensus       337 ~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  404 (428)
T 1cpt_A          337 RIMLSYPSANRDEEVFSNPDEFDITRFPN------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELS  404 (428)
T ss_dssp             EEEECHHHHTTCTTTCSSTTSCCTTCCSC------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEES
T ss_pred             EEEeCHHHhCCChhhCCChhhcCCCCCCC------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeC
Confidence            99999999999999999999999999941            2799999999999999999999999999999997 8876


Q ss_pred             CCCCCCCCCccCccCccccccccceeeeccC
Q 036916          501 GPGDTEPLDLSEGVGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  531 (538)
                      ++     ..+.  .........++.|++++|
T Consensus       405 ~~-----~~~~--~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          405 GP-----PRLV--ATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             SC-----CEEC--CCSSBCSEEECEEEEEEC
T ss_pred             CC-----cccc--cCccccCcceeeEEeeCC
Confidence            43     1121  122334457788888765


No 34 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=5.5e-59  Score=454.66  Aligned_cols=369  Identities=16%  Similarity=0.206  Sum_probs=290.7

Q ss_pred             CCCCCCCcCccccccccccCCCCccchHHHHHHHhh-CCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           41 TVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKH-GPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      ..||+|+++|.+.....+.   .+++..+.+| ++| ||||++++ ++.+.++|+||++++++|.++.  +++++.....
T Consensus         5 ~~~~~~~~~P~~~~~~~~~---~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~   78 (412)
T 2zbx_A            5 ATTPQTTDAPAFPSNRSCP---YQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNF   78 (412)
T ss_dssp             ---CCCCSSCBSSCCCSST---TSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTS
T ss_pred             CCCCCCCCCCCCCCCchhc---cChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccc
Confidence            3567777777652222333   5778899999 777 99999997 7889999999999999998753  3443321111


Q ss_pred             hhh-----cc--CCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHH
Q 036916          119 EIL-----GY--NYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMK  191 (538)
Q Consensus       119 ~~~-----~~--~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~  191 (538)
                      ...     +.  ... .++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        |+ ++|+.
T Consensus        79 ~~~~~~~~~~~~~~~-~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~d~~  147 (412)
T 2zbx_A           79 PATSPRFEAVRESPQ-AFIGLDPPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLAA--------GP-TADLV  147 (412)
T ss_dssp             CCCSGGGC----CCC-CGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-CEEHH
T ss_pred             ccccccccccccccc-ccccCCcHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHH
Confidence            100     00  112 245678999999999998 78999999999999999999999988643        44 79999


Q ss_pred             HHHHH-HHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHH
Q 036916          192 EIFNA-LTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKE  270 (538)
Q Consensus       192 ~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~  270 (538)
                      ..+.. +++++++. +||.+.           +. ...+.+.+..++..         .         .. ++..+..+.
T Consensus       148 ~~~~~~~~~~vi~~-~~G~~~-----------~~-~~~~~~~~~~~~~~---------~---------~~-~~~~~~~~~  195 (412)
T 2zbx_A          148 SQFALPVPSMVICR-LLGVPY-----------AD-HEFFQDASKRLVQS---------T---------DA-QSALTARND  195 (412)
T ss_dssp             HHTTTHHHHHHHHH-HHTCCG-----------GG-HHHHHHHHHHHHHC---------S---------SH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HcCCCH-----------HH-HHHHHHHHHHHhcc---------C---------cH-HHHHHHHHH
Confidence            98874 89999996 799876           11 12333333333220         0         01 445667778


Q ss_pred             HHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 036916          271 LDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTL  350 (538)
Q Consensus       271 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  350 (538)
                      +.+++.+.+++++++          ...|+++.|++ ..+.   .+...++++.+++..+++||+|||+++++|++++|+
T Consensus       196 ~~~~~~~~i~~r~~~----------~~~d~l~~ll~-~~~~---~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~  261 (412)
T 2zbx_A          196 LAGYLDGLITQFQTE----------PGAGLVGALVA-DQLA---NGEIDREELISTAMLLLIAGHETTASMTSLSVITLL  261 (412)
T ss_dssp             HHHHHHHHHHHHHHS----------CCSSHHHHHHH-TTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC----------CCCCHHHHHHH-hccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888888877652          23589999997 3221   111237889999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchh
Q 036916          351 NHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKI  430 (538)
Q Consensus       351 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  430 (538)
                      +||++|+++++|++                  |+++||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++
T Consensus       262 ~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~  323 (412)
T 2zbx_A          262 DHPEQYAALRADRS------------------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIA  323 (412)
T ss_dssp             TCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHH
T ss_pred             HCHHHHHHHHhChH------------------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhh
Confidence            99999999999853                  799999999999999996679999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          431 HRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       431 ~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                      ||||++|+||++|+||||.            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus       324 ~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  384 (412)
T 2zbx_A          324 NRDGTVYEDPDALDIHRSA------------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVP  384 (412)
T ss_dssp             TTCTTTSSSTTSCCTTSCC------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             cCCccccCCccccCCCCCC------------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence            9999999999999999971            3579999999999999999999999999999999 7998754


No 35 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=3.4e-59  Score=454.80  Aligned_cols=376  Identities=17%  Similarity=0.248  Sum_probs=297.8

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCcc--c-ccchhhcc--CCCceEeccCchh
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIK--A-LAPEILGY--NYAMFGFSPYGPY  136 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~g~~  136 (538)
                      .+++..+.+| ++||||+++++ ++.+.++|+||++++++|.++  .|++++.  . .....+..  .+.+ ++..+|+.
T Consensus        19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~   94 (403)
T 3aba_A           19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGS-LLWQDEPE   94 (403)
T ss_dssp             TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTC-CTTCCTTH
T ss_pred             cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccc-cccCCchh
Confidence            5678889999 89999999997 788999999999999999875  3655532  1 10000111  1222 46678999


Q ss_pred             HHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCC
Q 036916          137 WRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGG  215 (538)
Q Consensus       137 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~  215 (538)
                      |+++|++++ +.|+...++.+.+.+.++++++++.+.+.        ++ ++|+..++ ..+++++++. +||.+.    
T Consensus        95 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~----  159 (403)
T 3aba_A           95 HTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEAR--------GG-PVDLVKTFANAVPSMVISD-LFGVPV----  159 (403)
T ss_dssp             HHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHHH--------CS-CEEHHHHTTTHHHHHHHHH-HHTCCG----
T ss_pred             HHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHHHHHHHHH-HcCCCH----
Confidence            999999998 78999999999999999999999988642        34 79998766 4799999997 799886    


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhc
Q 036916          216 TTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVK  295 (538)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  295 (538)
                             +. ...+.+....++.   .     ..+          .+...+..+.+.+++.+.++++++.          
T Consensus       160 -------~~-~~~~~~~~~~~~~---~-----~~~----------p~~~~~~~~~~~~~~~~~i~~r~~~----------  203 (403)
T 3aba_A          160 -------ER-RAEFQDIAEAMMR---V-----DQD----------AAATEAAGMRLGGLLYQLVQERRAN----------  203 (403)
T ss_dssp             -------GG-HHHHHHHHHHHSB---S-----SSC----------HHHHHHHHHHHHHHHHHHHHHHHHS----------
T ss_pred             -------HH-HHHHHHHHHHHHh---c-----cCc----------HHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence                   11 1223322222111   0     001          1455667778888888888887652          


Q ss_pred             ccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 036916          296 EENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVI  374 (538)
Q Consensus       296 ~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  374 (538)
                      ...|+++.|++ ..+    ++... ++++.+++..+++||+|||+++++|++++|++||++|+++++|++          
T Consensus       204 ~~~dll~~ll~-~~~----~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------  268 (403)
T 3aba_A          204 PGDDLISALIT-TED----PDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS----------  268 (403)
T ss_dssp             CCSSHHHHHHT-SCC----TTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------
T ss_pred             CCCCHHHHHHh-hcc----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------
Confidence            23589999987 222    12223 888999999999999999999999999999999999999999864          


Q ss_pred             hhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCC
Q 036916          375 ESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKD  454 (538)
Q Consensus       375 ~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~  454 (538)
                              |+++||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||||++|+||++|+||||.     
T Consensus       269 --------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-----  335 (403)
T 3aba_A          269 --------LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP-----  335 (403)
T ss_dssp             --------GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-----
T ss_pred             --------HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC-----
Confidence                    7999999999999999966799999999999999999999999999999999999999999999983     


Q ss_pred             ccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccCC
Q 036916          455 IDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRL  532 (538)
Q Consensus       455 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  532 (538)
                             ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ..+..  ...+.......++.|++++|.
T Consensus       336 -------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~~~~--~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          336 -------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP--VEELR--FRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             -------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC--GGGSC--BCTTBSSCCBSCCEEECCCCC
T ss_pred             -------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCC--ccccc--cccCcccCCcceeEEEecCCC
Confidence                   2479999999999999999999999999999999 5998754  11122  233455567789999998873


No 36 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=3.9e-59  Score=455.71  Aligned_cols=385  Identities=16%  Similarity=0.220  Sum_probs=294.9

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc----hhhccCCCceEeccCchhHH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP----EILGYNYAMFGFSPYGPYWR  138 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~w~  138 (538)
                      .+++..+.++ ++||||+++++++.++++|+||+++++++.++ ..|++++.....    ......+.+ ++..+|+.|+
T Consensus        13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~   89 (404)
T 3ejb_B           13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQM-MLFQNQPDHR   89 (404)
T ss_dssp             HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTS-GGGCCTTHHH
T ss_pred             cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcc-hhhcCCchHH
Confidence            4677888888 58999999999999999999999999999987 567666532111    011111122 4677899999


Q ss_pred             HHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCCC
Q 036916          139 QIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGTT  217 (538)
Q Consensus       139 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~  217 (538)
                      ++|++++ +.|+...++.+.+.+.++++.+++.+.+         +. .+|+...+ ..+++++++. +||.+.      
T Consensus        90 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~------  151 (404)
T 3ejb_B           90 RLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQG---------KK-KMEVISDFAFPLASFVIAN-IIGVPE------  151 (404)
T ss_dssp             HHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTTT---------TS-EEEHHHHTHHHHHHHHHHH-HHTCCG------
T ss_pred             HHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhhh---------cC-CcchHHHHHHHHHHHHHHH-HcCCCH------
Confidence            9999998 8999999999999999999999887642         33 68986555 5689999988 589876      


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhccc
Q 036916          218 NHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEE  297 (538)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  297 (538)
                           + ....+.+....+...+.       .|..     ....+...+..+.+.+++.+.++++++          +..
T Consensus       152 -----~-~~~~~~~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~----------~~~  203 (404)
T 3ejb_B          152 -----E-DREQLKEWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKR----------HPQ  203 (404)
T ss_dssp             -----G-GHHHHHHHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH----------SCC
T ss_pred             -----H-HHHHHHHHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCc
Confidence                 1 11233333333322211       1211     112355667778888888888887764          234


Q ss_pred             ccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhh
Q 036916          298 NDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESD  377 (538)
Q Consensus       298 ~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  377 (538)
                      .|+++.|+. ..++    ....++++..++..+++||+|||+++++|++++|++||++|+++++|++             
T Consensus       204 ~d~l~~ll~-~~~~----~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------  265 (404)
T 3ejb_B          204 QDMISMLLK-GREK----DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-------------  265 (404)
T ss_dssp             SSHHHHHHH-C--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------
T ss_pred             chHHHHHHh-cccC----CCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------
Confidence            689999983 2221    1123788999999999999999999999999999999999999999976             


Q ss_pred             hcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccc
Q 036916          378 IKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDV  457 (538)
Q Consensus       378 ~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~  457 (538)
                           |+++||+|+||++|+++ .++|++++|++++|+.|||||.|.++.+++||||++|+||++|+|+||.        
T Consensus       266 -----~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~--------  331 (404)
T 3ejb_B          266 -----LIGTAVEECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP--------  331 (404)
T ss_dssp             -----GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS--------
T ss_pred             -----HHHHHHHHHHHhCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC--------
Confidence                 79999999999999999 5699999999999999999999999999999999999999999999982        


Q ss_pred             cCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccCCCCCC
Q 036916          458 RGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRLHAPL  536 (538)
Q Consensus       458 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  536 (538)
                          ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  .  +.+  ..+........+.|++++|..-|-
T Consensus       332 ----~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~--~~~--~~~~~~~~~~~lpv~~~~~~~~p~  401 (404)
T 3ejb_B          332 ----NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF--E--WRY--RPLFGFRALEELPVTFEASWSHPQ  401 (404)
T ss_dssp             ----CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC----C--CCB--CSCSSBCCBSCCEEECC-------
T ss_pred             ----CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCC--C--cee--ccCcccCCcceeEEEEeccccCcc
Confidence                2469999999999999999999999999999999 9999743  1  233  334455667899999999966555


Q ss_pred             CC
Q 036916          537 FE  538 (538)
Q Consensus       537 ~~  538 (538)
                      ||
T Consensus       402 ~~  403 (404)
T 3ejb_B          402 FE  403 (404)
T ss_dssp             --
T ss_pred             cc
Confidence            43


No 37 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=7.8e-59  Score=453.30  Aligned_cols=379  Identities=22%  Similarity=0.315  Sum_probs=296.5

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcc--cc----cc---hhhcc-CCCceEecc
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIK--AL----AP---EILGY-NYAMFGFSP  132 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~--~~----~~---~~~~~-~~~~~~~~~  132 (538)
                      .+++..+.+| ++||||+++++++.+.|+|+||++++++|.++.  +++++.  ..    ..   ...+. ... .++..
T Consensus        15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~   90 (408)
T 1odo_A           15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVE-NMFTA   90 (408)
T ss_dssp             TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCC-SGGGC
T ss_pred             CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccc-ccccc
Confidence            5778899999 999999999988889999999999999998763  333321  11    00   00100 112 24677


Q ss_pred             CchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH-HHHHHHHHHHHhcccc
Q 036916          133 YGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN-ALTFNVATRMVVGKRL  211 (538)
Q Consensus       133 ~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~-~~~~~~i~~~~fG~~~  211 (538)
                      +|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.      .+++ ++|+.+++. .+++++++. +||.+.
T Consensus        91 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~  161 (408)
T 1odo_A           91 YGPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAEL------PAGE-PVDLRQELAYPLPIAVIGH-LMGVPQ  161 (408)
T ss_dssp             CHHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHS------CTTS-CEEHHHHTTTHHHHHHHHH-HHTCCH
T ss_pred             CChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhh------cCCC-CcchHHHHhhhhHHHHHHH-HhCCCH
Confidence            8999999999998 89999999999999999999999988642      2244 799999887 599999996 799876


Q ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 036916          212 VRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDD  291 (538)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  291 (538)
                                 + ....+.+.+..++..        .      .    ..++..+..+.+.+++.+++++++++      
T Consensus       162 -----------~-~~~~~~~~~~~~~~~--------~------~----~~~~~~~~~~~~~~~~~~~i~~r~~~------  205 (408)
T 1odo_A          162 -----------D-RRDGFRALVDGVFDT--------T------L----DQAEAQANTARLYEVLDQLIAAKRAT------  205 (408)
T ss_dssp             -----------H-HHHHHHHHHHHHHCT--------T------C----CHHHHHHHHHHHHHHHHHHHHHHHHS------
T ss_pred             -----------H-HHHHHHHHHHHHhcc--------c------C----CHHHHHHHHHHHHHHHHHHHHHHhhC------
Confidence                       2 122333333332210        0      0    12455667778888888888877652      


Q ss_pred             chhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCC
Q 036916          292 QVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRE  370 (538)
Q Consensus       292 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  370 (538)
                          ...|+++.|++.. +++. .+... ++++.+++.++++||+|||+++++|++++|++||++|+++++|+       
T Consensus       206 ----~~~d~l~~ll~~~-~~~~-~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-------  272 (408)
T 1odo_A          206 ----PGDDMTSLLIAAR-DDEG-DGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE-------  272 (408)
T ss_dssp             ----CCSSHHHHHHHHH-CC------CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-------
T ss_pred             ----CCCCHHHHHHHhc-cccc-ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------
Confidence                2358999999843 2210 12223 78899999999999999999999999999999999999999974       


Q ss_pred             CCCChhhhcccHHHHHHHHhhccCCCCCCCCcceecccccccc-ceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccC
Q 036916          371 RQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIA-GYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFL  449 (538)
Q Consensus       371 ~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~  449 (538)
                                 +|+++||+|+||++|+++..++|++++|++++ |+.|||||.|.++.+++||||++|+||++|+|||| 
T Consensus       273 -----------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-  340 (408)
T 1odo_A          273 -----------VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT-  340 (408)
T ss_dssp             -----------SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS-
T ss_pred             -----------HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC-
Confidence                       26999999999999999976799999999999 99999999999999999999999999999999994 


Q ss_pred             CCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeee
Q 036916          450 TTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLL  528 (538)
Q Consensus       450 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (538)
                                 +..++|||+|+|.|+|++||++|++++++.||++| ++++..+  ..  ++....+.+..+..++.|++
T Consensus       341 -----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~--~~~~~~~~~~~~~~~l~v~~  405 (408)
T 1odo_A          341 -----------VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADP--AE--ELPPVPSLISNGHQRLPVLL  405 (408)
T ss_dssp             -----------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCT--TS--CCCBCSCSSBCCBSCCEEEC
T ss_pred             -----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCC--cc--ccccccCccccCcccceEEe
Confidence                       13589999999999999999999999999999999 7998753  11  22233455666778999988


Q ss_pred             cc
Q 036916          529 TP  530 (538)
Q Consensus       529 ~~  530 (538)
                      ++
T Consensus       406 ~~  407 (408)
T 1odo_A          406 HA  407 (408)
T ss_dssp             C-
T ss_pred             cC
Confidence            64


No 38 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.3e-58  Score=451.06  Aligned_cols=379  Identities=17%  Similarity=0.215  Sum_probs=298.2

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc-----hhhccCCCceEeccCchhH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP-----EILGYNYAMFGFSPYGPYW  137 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~w  137 (538)
                      .+++..+.+| ++|||||++++++.+.++|+||+++++++.++.  |++++.....     ......+.+ ++..+|+.|
T Consensus        20 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h   95 (411)
T 3a4g_A           20 QNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPM-MILMDPPDH   95 (411)
T ss_dssp             TCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCC-GGGCCTTHH
T ss_pred             cCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccc-cccCCchHH
Confidence            5678899999 999999999999889999999999999998763  7665532111     111111223 466789999


Q ss_pred             HHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH-HHHHHHHHHHHHHhccccccCCC
Q 036916          138 RQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI-FNALTFNVATRMVVGKRLVRGGT  216 (538)
Q Consensus       138 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~  216 (538)
                      +++|++++ +.|+...++.+.+.+.++++++++.+.+         ++ ++|+... ...+++++++.+ ||.+.     
T Consensus        96 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~vd~~~~~~~~~~~~vi~~~-~G~~~-----  158 (411)
T 3a4g_A           96 TRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT---------DG-PVDLMREYAFQIPVQVICEL-LGVPA-----  158 (411)
T ss_dssp             HHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS---------SS-CEEHHHHTTTTHHHHHHHHH-HTCCG-----
T ss_pred             HHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---------cC-CccHHHHHHHHhHHHHHHHH-hCCCH-----
Confidence            99999998 7999999999999999999998877632         23 7999755 468999999975 99887     


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcc
Q 036916          217 TNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKE  296 (538)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  296 (538)
                            ++ ...+.+....++.         ..|     +     ++..+..+.+.+++.+.++++++.          .
T Consensus       159 ------~~-~~~~~~~~~~~~~---------~~p-----~-----~~~~~~~~~~~~~~~~~i~~r~~~----------~  202 (411)
T 3a4g_A          159 ------ED-RDDFSAWSSVLVD---------DSP-----A-----DDKNAAMGKLHGYLSDLLERKRTE----------P  202 (411)
T ss_dssp             ------GG-HHHHHHHHHHHTT---------SSC-----T-----TTHHHHHHHHHHHHHHHHHHHHHS----------C
T ss_pred             ------HH-HHHHHHHHHHHhc---------cCC-----H-----HHHHHHHHHHHHHHHHHHHHHHhC----------C
Confidence                  11 1223332222211         012     0     234566777888888888877652          2


Q ss_pred             cccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCCh
Q 036916          297 ENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIE  375 (538)
Q Consensus       297 ~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  375 (538)
                      ..|+++.|++ ..+.   ++... ++++..++..+++||+|||+++++|++++|++||++|+++++|++           
T Consensus       203 ~~d~l~~ll~-~~~~---~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------  267 (411)
T 3a4g_A          203 DDALLSSLLA-VSDE---DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS-----------  267 (411)
T ss_dssp             CSSHHHHHHH-CCCT---TCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------
T ss_pred             CCCHHHHHHH-hhcc---CCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH-----------
Confidence            3589999997 3221   12223 888999999999999999999999999999999999999999864           


Q ss_pred             hhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCc
Q 036916          376 SDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDI  455 (538)
Q Consensus       376 ~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~  455 (538)
                             |+++||+|+||++|+++..++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.      
T Consensus       268 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------  334 (411)
T 3a4g_A          268 -------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA------  334 (411)
T ss_dssp             -------GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC------
T ss_pred             -------HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC------
Confidence                   8999999999999999966799999999999999999999999999999999999999999999983      


Q ss_pred             cccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccCCCC
Q 036916          456 DVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       456 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  534 (538)
                            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ...+.+  ..+.+.....++.|++++|...
T Consensus       335 ------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~~~~~--~~~~~~~~~~~lpv~~~~r~~~  404 (411)
T 3a4g_A          335 ------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVG--LDELVY--RESTLVRGLSRMPVTMGPRSAL  404 (411)
T ss_dssp             ------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GGGCCB--CCCTTBCCBSCCEEECCCCCC-
T ss_pred             ------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCC--cccccc--ccCccccCcceeEEEecCcchh
Confidence                  2479999999999999999999999999999999 6998754  111222  3344556678999999999765


Q ss_pred             CC
Q 036916          535 PL  536 (538)
Q Consensus       535 ~~  536 (538)
                      +-
T Consensus       405 ~~  406 (411)
T 3a4g_A          405 EH  406 (411)
T ss_dssp             --
T ss_pred             hc
Confidence            43


No 39 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=2e-58  Score=449.84  Aligned_cols=388  Identities=16%  Similarity=0.224  Sum_probs=298.1

Q ss_pred             CCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEc-CCcc-eEEecCHHHHHHHHhhCCcccccCcccccc
Q 036916           41 TVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKL-GMHR-ALIVSNWEIAKECFTTNDKVFCNRIKALAP  118 (538)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~-~~~~-~v~v~dpe~~~~il~~~~~~~~~~~~~~~~  118 (538)
                      +.+|+|+.+|+.++   +.   .+++.++++++ +||||+++++ ++.+ .++|+||++++++|.++  .|++++.....
T Consensus         8 ~~~~~~~~~p~~~~---~~---~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~   78 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PG---SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQ   78 (406)
T ss_dssp             CCSCCEEECCCCCC---CT---TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTT
T ss_pred             hhccCCCCCCCCcc---cc---cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCC
Confidence            46777777888766   22   56788898885 7999999996 5656 99999999999999863  56655432110


Q ss_pred             h--h---hccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH
Q 036916          119 E--I---LGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI  193 (538)
Q Consensus       119 ~--~---~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~  193 (538)
                      .  .   ....+.+ ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        ++ ++|+...
T Consensus        79 ~~~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~  147 (406)
T 1s1f_A           79 VTRLAPHFIPARGA-VGFLDPPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLRA--------GP-PADLTEA  147 (406)
T ss_dssp             BCBSSSSCSSCTTS-GGGCCTTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-SEEHHHH
T ss_pred             cccccccccccccc-cccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHH
Confidence            0  0   1111223 35668999999999999 78999999999999999999999988642        34 7999877


Q ss_pred             HH-HHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHH
Q 036916          194 FN-ALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELD  272 (538)
Q Consensus       194 ~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  272 (538)
                      +. .+++++++. +||.+. +          . ...+.+....++....        |     +     ++..+..+.+.
T Consensus       148 ~~~~~~~~vi~~-~~G~~~-~----------~-~~~~~~~~~~~~~~~~--------~-----~-----~~~~~~~~~~~  196 (406)
T 1s1f_A          148 VLSPFPIAVICE-LMGVPA-T----------D-RHSMHTWTQLILSSSH--------G-----A-----EVSERAKNEMN  196 (406)
T ss_dssp             TTTHHHHHHHHH-HHTCCG-G----------G-HHHHHHHHHHHHHHHT--------T-----C-----CCCHHHHTHHH
T ss_pred             HhhHhHHHHHHH-HhCCCH-H----------H-HHHHHHHHHHHHhccC--------C-----H-----HHHHHHHHHHH
Confidence            64 799999998 699887 1          1 1233333333332210        1     0     12334556677


Q ss_pred             HHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhC
Q 036916          273 QILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNH  352 (538)
Q Consensus       273 ~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~  352 (538)
                      +++.+.++++++.          ...|+++.|++.. ++    +...++++.+++..+++|| |||+++++|++++|++|
T Consensus       197 ~~~~~~i~~r~~~----------~~~d~l~~ll~~~-~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~  260 (406)
T 1s1f_A          197 AYFSDLIGLRSDS----------AGEDVTSLLGAAV-GR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSR  260 (406)
T ss_dssp             HHHHHHHHTSCCS----------CCCSHHHHHHHHH-HT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhC----------CCCCHHHHHHHhh-cc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHC
Confidence            7777777765431          2358999999842 21    1123788999999999999 99999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCC-CCcceeccccccccceEeCCCCEEEEecchhc
Q 036916          353 LDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAP-LSIPHESMEDCTIAGYHVPAGTRLFVNIAKIH  431 (538)
Q Consensus       353 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~-~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~  431 (538)
                      |++|+++++|++                  |+++||+|+||++|+++ ..++|.+++|++++|+.|||||.|.++.+++|
T Consensus       261 P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~  322 (406)
T 1s1f_A          261 PELAERLRSEPE------------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAAN  322 (406)
T ss_dssp             HHHHHHHHHCGG------------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHT
T ss_pred             HHHHHHHHhCHH------------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhc
Confidence            999999999965                  79999999999999999 55699999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCc
Q 036916          432 RDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDL  510 (538)
Q Consensus       432 ~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~  510 (538)
                      |||++|+||++|+||||.            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ..  ++
T Consensus       323 rdp~~~~dP~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~--~~  386 (406)
T 1s1f_A          323 RDPEVFPDPDRIDFERSP------------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVA--PE--DV  386 (406)
T ss_dssp             TCTTTSSSTTSCCTTC--------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSC--GG--GS
T ss_pred             CCcccCCCcceeCCCCCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCC--Cc--cc
Confidence            999999999999999995            2469999999999999999999999999999999 7999764  11  22


Q ss_pred             cCccCccccccccceeeec
Q 036916          511 SEGVGLTNLKATPLQVLLT  529 (538)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~  529 (538)
                      ....+........+.|++.
T Consensus       387 ~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          387 PFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             CBCSSCSBCCBSCCEEECC
T ss_pred             eeccCcccCCcceeEEeeC
Confidence            2233444555678888763


No 40 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=3.7e-59  Score=455.63  Aligned_cols=374  Identities=15%  Similarity=0.223  Sum_probs=291.1

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCccc-ccch--hhcc----CCCceEeccCc
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKA-LAPE--ILGY----NYAMFGFSPYG  134 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~-~~~~--~~~~----~~~~~~~~~~g  134 (538)
                      .+++..+.+| ++||||+++++ ++.++|+|+||+.++++|.++.  +++++.. ....  .+..    ...+ ++..+|
T Consensus        24 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g   99 (408)
T 3abb_A           24 YQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFP-LIGVDD   99 (408)
T ss_dssp             TSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCT-TTTCCT
T ss_pred             cCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccc-cccCCc
Confidence            5678899999 89999999997 7889999999999999998753  4433320 0100  0110    1112 456789


Q ss_pred             hhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH-HHHHHHHHHHHhcccccc
Q 036916          135 PYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN-ALTFNVATRMVVGKRLVR  213 (538)
Q Consensus       135 ~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~  213 (538)
                      +.|+++|++++ +.|+...++.+.+.+.++++++++.+..        .|+ ++|+..++. .+++++++. +||.+.  
T Consensus       100 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~g~-~~d~~~~~~~~~~~~vi~~-~~G~~~--  166 (408)
T 3abb_A          100 PVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA--------KGP-GADLVSAFALPVPSVAICE-LLGVPY--  166 (408)
T ss_dssp             THHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH--------TCS-CEEHHHHTTTHHHHHHHHH-HHTCCG--
T ss_pred             hHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--------cCC-CeehHHHHHHHHHHHHHHH-HhCCCH--
Confidence            99999999998 7999999999999999999999998863        244 799999886 488999997 799876  


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcch
Q 036916          214 GGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQV  293 (538)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (538)
                               +. ...+.+.+..++..        ..+           +...+..+.+.+++.+.++++++.        
T Consensus       167 ---------~~-~~~~~~~~~~~~~~--------~~~-----------~~~~~~~~~~~~~~~~~i~~r~~~--------  209 (408)
T 3abb_A          167 ---------GD-HDFFEECSRNFVGA--------ATS-----------AEADAAFGELYTYLHGLVGRKQAE--------  209 (408)
T ss_dssp             ---------GG-HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS--------
T ss_pred             ---------HH-HHHHHHHHHHHhcc--------cch-----------HHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence                     11 12233333222210        001           112234556777888888876652        


Q ss_pred             hcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCC
Q 036916          294 VKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQV  373 (538)
Q Consensus       294 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  373 (538)
                        ...|+++.|++...+.    +...++++..++..+++||+|||+++++|++++|++||++|+++++|++         
T Consensus       210 --~~~d~l~~ll~~~~~~----~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------  274 (408)
T 3abb_A          210 --PEDGLLDELIARQLEE----GDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG---------  274 (408)
T ss_dssp             --CCSSHHHHHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH---------
T ss_pred             --CCCCHHHHHHhcccCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------
Confidence              2358999999843211    1123888999999999999999999999999999999999999998764         


Q ss_pred             ChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCC
Q 036916          374 IESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHK  453 (538)
Q Consensus       374 ~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~  453 (538)
                               |+++||+|+||++|+++ .++|++.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.    
T Consensus       275 ---------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----  340 (408)
T 3abb_A          275 ---------AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA----  340 (408)
T ss_dssp             ---------HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC----
T ss_pred             ---------hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC----
Confidence                     79999999999999999 6799999999999999999999999999999999999999999999961    


Q ss_pred             CccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccC
Q 036916          454 DIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       454 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  531 (538)
                              ..++|||+|+|.|+|++||++|++++++.||++| ++++..+  .....+  ..+.+......+.|++++|
T Consensus       341 --------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~--~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          341 --------RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVP--LDEVPI--KAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             --------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GGGSCB--CCTTSCCSBSCCEEECSCC
T ss_pred             --------CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCC--cccccc--ccCcccCCcceeEEEeCCC
Confidence                    3579999999999999999999999999999999 8998653  111222  2344455678899999876


No 41 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=4e-59  Score=454.97  Aligned_cols=397  Identities=13%  Similarity=0.153  Sum_probs=305.2

Q ss_pred             CCCCCCCCCCCcCccc--cccccccCC--CCccchHHHHHHHhhC--CeeEEEcCCcceEEecCHHHHHHHHhhCCcccc
Q 036916           37 TDKKTVPEPGGAWPLI--GHLHLLGGQ--KPAAHVTLGSIADKHG--PIFMIKLGMHRALIVSNWEIAKECFTTNDKVFC  110 (538)
Q Consensus        37 ~~~~~~ppgp~~~p~~--G~~~~~~~~--~~~~~~~~~~~~~~yG--~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~  110 (538)
                      ..+.++||||.+.|..  +.+-.+...  ..+++..+.+|+ +||  |||+++..+ +.++|+|+++++++|.+. ..|+
T Consensus         7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f~   83 (415)
T 2zwu_A            7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHFS   83 (415)
T ss_dssp             ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTEE
T ss_pred             cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-cccC
Confidence            4466789999988864  443212111  246788888885 799  999998333 699999999999999754 4677


Q ss_pred             cCc-ccccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCcccc
Q 036916          111 NRI-KALAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVE  189 (538)
Q Consensus       111 ~~~-~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vd  189 (538)
                      +++ ...... ... +.+.++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        +  ++|
T Consensus        84 ~~~~~~~~~~-~~~-~~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--------~--~~d  150 (415)
T 2zwu_A           84 SECPFIPREA-GEA-YDFIPTSMDPPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRPQ--------G--QCN  150 (415)
T ss_dssp             TTSCSSSHHH-HHH-CCCTTTTCCTTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGGG--------T--EEE
T ss_pred             CCcccCCCCc-ccc-ccccCccCCCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--Ccc
Confidence            665 111111 111 122035568999999999998 89999999999999999999999887532        2  699


Q ss_pred             HHHHH-HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHH
Q 036916          190 MKEIF-NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTA  268 (538)
Q Consensus       190 l~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  268 (538)
                      +..++ ..+++++++.+ ||.++           +. ...+.+....++..        ..|.           +..+..
T Consensus       151 ~~~~~~~~~~~~vi~~~-~G~~~-----------~~-~~~~~~~~~~~~~~--------~~P~-----------~~~~~~  198 (415)
T 2zwu_A          151 FTEDYAEPFPIRIFMLL-AGLPE-----------ED-IPHLKYLTDQMTRP--------DGSM-----------TFAEAK  198 (415)
T ss_dssp             HHHHTTTHHHHHHHHHH-HTCCG-----------GG-HHHHHHHHHHHHSC--------CSSS-----------CHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-cCCCH-----------HH-HHHHHHHHHHHHhc--------cCHH-----------HHHHHH
Confidence            99865 78999999998 99987           21 12333333332211        0121           345566


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHH
Q 036916          269 KELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTL  348 (538)
Q Consensus       269 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~  348 (538)
                      +.+.+++.+.+++++++          ...|+++.|++ ..+.   .....++++..++..+++||+|||+++++|++++
T Consensus       199 ~~~~~~~~~~i~~r~~~----------~~~dll~~ll~-~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~  264 (415)
T 2zwu_A          199 EALYDYLIPIIEQRRQK----------PGTDAISIVAN-GQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEF  264 (415)
T ss_dssp             HHHHHHHHHHHHHHHHS----------CCSSHHHHHHT-CEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhC----------CCCCHHHHHHH-hhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence            77888888888887652          23589999987 2221   1112378899999999999999999999999999


Q ss_pred             HHhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecc
Q 036916          349 TLNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIA  428 (538)
Q Consensus       349 L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~  428 (538)
                      |++||++|+++++|++                  |+++||+|+||++|+++ .+ |.+++|++++|+.||||+.|.++.+
T Consensus       265 L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~  324 (415)
T 2zwu_A          265 LAKSPEHRQELIERPE------------------RIPAACEELLRRFSLVA-DG-RILTSDYEFHGVQLKKGDQILLPQM  324 (415)
T ss_dssp             HHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHTCCBC-CE-EEESSCEEETTEEECTTCEEECCHH
T ss_pred             HHhCHHHHHHHHhCHH------------------HHHHHHHHHHhhcCCcC-Cc-eeeCCCEEECCEEECCCCEEEeCch
Confidence            9999999999999964                  89999999999999999 57 9999999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCCCCCCC
Q 036916          429 KIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATPGPGDTEP  507 (538)
Q Consensus       429 ~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~~~~~~  507 (538)
                      ++||||++|+||++|+||||-            ..++|||+|+|.|+|++||++|++++++.||++|+ +++.++     
T Consensus       325 ~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----  387 (415)
T 2zwu_A          325 LSGLDERENACPMHVDFSRQK------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG-----  387 (415)
T ss_dssp             HHHHCTTTSSSTTSCCTTCSS------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT-----
T ss_pred             hhCCCchhCCCccccCCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC-----
Confidence            999999999999999999961            24799999999999999999999999999999998 998763     


Q ss_pred             CCccCccCccccccccceeeeccCCC
Q 036916          508 LDLSEGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ..+. ..+.+.....++.|++++|..
T Consensus       388 ~~~~-~~~~~~~~~~~lpv~~~~r~~  412 (415)
T 2zwu_A          388 AQIQ-HKSGIVSGVQALPLVWDPATT  412 (415)
T ss_dssp             CCCC-EECSSBCEESCCEEECCGGGC
T ss_pred             cccc-cCCccccCcceeEEEEecCCC
Confidence            1221 223445566899999998865


No 42 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=5.3e-59  Score=454.94  Aligned_cols=379  Identities=16%  Similarity=0.199  Sum_probs=292.6

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHHh
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRK  142 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~  142 (538)
                      .+++.++.++++ ||||   +.++.+.++|+||+++++++.+. ..|++++....... .... ..++..+|+.|+++|+
T Consensus        28 ~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~-~~~~-~~~~~~~g~~~~~~R~  100 (411)
T 2jjn_A           28 TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVIEGA-SPTP-GMIHEIDPPEHRALRK  100 (411)
T ss_dssp             HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGSTTC-CCCT-TCGGGCCTTHHHHHHH
T ss_pred             cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccCCcc-cccc-cccccCCchHHHHHHH
Confidence            356778888876 9998   55667899999999999999875 46776653221111 1112 2345668999999999


Q ss_pred             hhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH-HHHHHHHHHHHHHhccccccCCCCCCcc
Q 036916          143 IATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI-FNALTFNVATRMVVGKRLVRGGTTNHQE  221 (538)
Q Consensus       143 ~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~  221 (538)
                      +++ +.|+...++.+.+.+.++++++++.           .++ ++|+... ...+++++++.+ ||.+. +..      
T Consensus       101 ~~~-~~fs~~~l~~~~~~i~~~~~~ll~~-----------~~~-~~d~~~~~~~~~~~~vi~~~-fG~~~-~~~------  159 (411)
T 2jjn_A          101 VVS-SAFTPRTISDLEPRIRDVTRSLLAD-----------AGE-SFDLVDVLAFPLPVTIVAEL-LGLPP-MDH------  159 (411)
T ss_dssp             HHH-HHSCHHHHHTTHHHHHHHHHHHHHT-----------SCS-EEEHHHHTTTHHHHHHHHHH-HTCCS-CCC------
T ss_pred             Hhh-hhcCHHHHHHHHHHHHHHHHHHHhc-----------CCC-ceeHHHHHHHHHHHHHHHHH-cCCCH-HHH------
Confidence            998 8999999999999999999888865           133 7999955 468999999998 99987 221      


Q ss_pred             chHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHH
Q 036916          222 IDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFM  301 (538)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l  301 (538)
                       + .   +.+....+....        .|.  +++ +...++..+..+.+.+++.+.+++++++          ...|++
T Consensus       160 -~-~---~~~~~~~~~~~~--------~~~--~~~-p~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d~l  213 (411)
T 2jjn_A          160 -E-Q---FGDWSGALVDIQ--------MDD--PTD-PALAERIADVLNPLTAYLKARCAERRAD----------PGDDLI  213 (411)
T ss_dssp             -S-T---TCCHHHHHHHSC--------CSC--TTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHH
T ss_pred             -H-H---HHHHHHHHHhcc--------Ccc--ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHH
Confidence             1 1   111222222211        111  110 1223456677778888888888877651          236899


Q ss_pred             HHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcc
Q 036916          302 DVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKN  380 (538)
Q Consensus       302 ~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  380 (538)
                      +.|++ ..+    ++... ++++..++..+++||+|||+++++|++++|++||++|+++++|++                
T Consensus       214 ~~ll~-~~~----~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------  272 (411)
T 2jjn_A          214 SRLVL-AEV----DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG----------------  272 (411)
T ss_dssp             HHHHH-CCB----TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG----------------
T ss_pred             HHHHh-ccc----CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------
Confidence            99997 322    12223 788999999999999999999999999999999999999999975                


Q ss_pred             cHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCC
Q 036916          381 LVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQ  460 (538)
Q Consensus       381 lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~  460 (538)
                        |+++||+|+||++|+++. ++|++++|++++|+.|||||.|.++.+++||||++|+||++|+||||.+          
T Consensus       273 --~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------  339 (411)
T 2jjn_A          273 --RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG----------  339 (411)
T ss_dssp             --GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS----------
T ss_pred             --hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC----------
Confidence              899999999999999995 6999999999999999999999999999999999999999999999842          


Q ss_pred             CCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCCCCCCCCCccCccCccccccccceeeeccCCCC
Q 036916          461 NFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRLHA  534 (538)
Q Consensus       461 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  534 (538)
                      ...++|||+|+|.|+|++||++|++++++.||++|+ +++.++  .   .+....+.......++.|+++++...
T Consensus       340 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~---~~~~~~~~~~~~~~~lpv~~~~~~r~  409 (411)
T 2jjn_A          340 GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRD--D---ERLRHFEQIVLGTRHLPVLAGSSPRQ  409 (411)
T ss_dssp             SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCS--S---CCCCBCCSSSSSBSCCEEECSCCTTC
T ss_pred             CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCC--C---ceeccccccccCcceeEEEecCCCCC
Confidence            125799999999999999999999999999999996 999743  1   22112233445567889999887543


No 43 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=4.7e-59  Score=454.63  Aligned_cols=379  Identities=20%  Similarity=0.268  Sum_probs=297.0

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCccccc-------c---hhhcc-C-CCceE
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKALA-------P---EILGY-N-YAMFG  129 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~-------~---~~~~~-~-~~~~~  129 (538)
                      .+++..+.++ ++||||+++++ ++.++|+|+||++++++|.++.  +++++....       .   ..++. . .. .+
T Consensus        17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l   92 (411)
T 1gwi_A           17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR-SM   92 (411)
T ss_dssp             SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS-SG
T ss_pred             CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc-cc
Confidence            5678889999 99999999997 7889999999999999998763  333321000       0   01100 1 12 24


Q ss_pred             eccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH-HHHHHHHHHHHhc
Q 036916          130 FSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN-ALTFNVATRMVVG  208 (538)
Q Consensus       130 ~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~-~~~~~~i~~~~fG  208 (538)
                      +..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+        +++ ++|+..++. .+++++++. +||
T Consensus        93 ~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--------~~~-~~d~~~~~~~~~~~~vi~~-~~G  161 (411)
T 1gwi_A           93 LTVDGAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA--------DGG-VVDLKAAFAYPLPMYVVAD-LMG  161 (411)
T ss_dssp             GGCCHHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC--------SCC-CEEHHHHTTTHHHHHHHHH-HHT
T ss_pred             ccCCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH--------cCC-CcchHHHHhhHHHHHHHHH-HhC
Confidence            6778999999999998 8999999999999999999988876631        244 799998886 599999995 799


Q ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 036916          209 KRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRIS  288 (538)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  288 (538)
                      .+.           +. ...+.+....++..        .      .    ..++..+..+.+.+++.++++++++.   
T Consensus       162 ~~~-----------~~-~~~~~~~~~~~~~~--------~------~----~~~~~~~~~~~~~~~~~~~i~~r~~~---  208 (411)
T 1gwi_A          162 IEE-----------AR-LPRLKVLFEKFFST--------Q------T----PPEEVVATLTELASIMTDTVAAKRAA---  208 (411)
T ss_dssp             CCG-----------GG-HHHHHHHHHHHHCT--------T------S----CHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred             CCH-----------HH-HHHHHHHHHHHhcc--------C------C----ChHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence            876           11 12333333332210        0      0    12456667778888888888877652   


Q ss_pred             CCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhc
Q 036916          289 SDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIG  368 (538)
Q Consensus       289 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  368 (538)
                             ...|+++.|++ ..++   .....++++.+++..+++||+|||+++++|++++|++||++|+++++|+     
T Consensus       209 -------~~~d~l~~ll~-~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----  272 (411)
T 1gwi_A          209 -------PGDDLTSALIQ-ASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE-----  272 (411)
T ss_dssp             -------CCSSHHHHHHH-CCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS-----
T ss_pred             -------CCCCHHHHHHH-hccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh-----
Confidence                   23589999997 3221   1112388899999999999999999999999999999999999999874     


Q ss_pred             CCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCC-CCCCCCCCCc
Q 036916          369 RERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIW-EEPNEFRPER  447 (538)
Q Consensus       369 ~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R  447 (538)
                                   +|+++||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||||++| +||++|+|||
T Consensus       273 -------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR  339 (411)
T 1gwi_A          273 -------------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTR  339 (411)
T ss_dssp             -------------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTC
T ss_pred             -------------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCC
Confidence                         26999999999999999976799999999999999999999999999999999999 9999999999


Q ss_pred             cCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCcccccccccee
Q 036916          448 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQV  526 (538)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (538)
                      |.+           ..++|||+|+|.|+|++||++|++++++.||++| ++++..+  ..  ++....+.+..+..++.|
T Consensus       340 f~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~--~~~~~~~~~~~~~~~lpv  404 (411)
T 1gwi_A          340 TSG-----------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVP--AA--ELRNKPVVTQNDLFELPV  404 (411)
T ss_dssp             CCS-----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GG--GCCBCSCTTBCCBSCCEE
T ss_pred             CCC-----------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCC--cc--cccccccccccCcceeEE
Confidence            942           3579999999999999999999999999999999 7998653  11  122233445566789999


Q ss_pred             eeccCCC
Q 036916          527 LLTPRLH  533 (538)
Q Consensus       527 ~~~~r~~  533 (538)
                      ++++|.|
T Consensus       405 ~~~~r~~  411 (411)
T 1gwi_A          405 RLAHHHH  411 (411)
T ss_dssp             ESSCC--
T ss_pred             EecCCCC
Confidence            9999965


No 44 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=8.1e-59  Score=451.98  Aligned_cols=371  Identities=13%  Similarity=0.175  Sum_probs=296.1

Q ss_pred             CccchHHHHHHHhh--CCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHH
Q 036916           63 PAAHVTLGSIADKH--GPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQI  140 (538)
Q Consensus        63 ~~~~~~~~~~~~~y--G~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~  140 (538)
                      .+++.++.+|+++|  |||+++++++ +.++|+||+.+++++.+ ...|++++......... .+...++..+|+.|+++
T Consensus        19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~   95 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYETG-EFELMMAGQDDPVHKKY   95 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC-----CCCTTTTCCTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCCCc-ccccCcccCCchHHHHH
Confidence            57899999999999  9999999875 69999999999999954 45677765533211111 12223467789999999


Q ss_pred             HhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCCCCC
Q 036916          141 RKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGTTNH  219 (538)
Q Consensus       141 R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  219 (538)
                      |+++. +.|+...++.+.+.+.++++.+++.+.+         +. .+|+...+ ..+++++++. +||.+.        
T Consensus        96 R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~--------  155 (398)
T 4fb2_A           96 RQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE---------LG-EGDAATWLANEIPARLTAI-LLGLPP--------  155 (398)
T ss_dssp             HHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT---------TT-EEEHCCCCCTTHHHHHHHH-HTTSCG--------
T ss_pred             HHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh---------cC-CccHHHHHHHHHHHHHHHH-HcCCCH--------
Confidence            99998 8999999999999999999999877642         22 57875554 6899999998 789876        


Q ss_pred             ccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhccccc
Q 036916          220 QEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEEND  299 (538)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d  299 (538)
                         + ....+.+....++.           +.        ......+..+.+.+++.+.+++++++          ...|
T Consensus       156 ---~-~~~~~~~~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d  202 (398)
T 4fb2_A          156 ---E-DGDTYRRWVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTN----------PGND  202 (398)
T ss_dssp             ---G-GHHHHHHHHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSS
T ss_pred             ---H-HHHHHHHHHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCC
Confidence               1 12334444443332           10        12356677788888999999887762          3468


Q ss_pred             HHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhh
Q 036916          300 FMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDI  378 (538)
Q Consensus       300 ~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  378 (538)
                      +++.|++ ..++    +... ++++..++..+++||+|||+++++|++++|++||++|+++++|++              
T Consensus       203 ~l~~ll~-~~~~----~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------  263 (398)
T 4fb2_A          203 IMSRVIM-SKID----GESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE--------------  263 (398)
T ss_dssp             HHHHHHH-CCBT----TBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------
T ss_pred             HHHHHHH-cccC----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------
Confidence            9999998 3221    2223 888999999999999999999999999999999999999999976              


Q ss_pred             cccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCcccc
Q 036916          379 KNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVR  458 (538)
Q Consensus       379 ~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~  458 (538)
                          |+++||+|+||++|+++  ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.         
T Consensus       264 ----~l~a~i~E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------  328 (398)
T 4fb2_A          264 ----LIPNAVDELLRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP---------  328 (398)
T ss_dssp             ----GHHHHHHHHHHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS---------
T ss_pred             ----HHHHHHHHHHHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC---------
Confidence                68999999999999998  589999999999999999999999999999999999999999999982         


Q ss_pred             CCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccCC
Q 036916          459 GQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRL  532 (538)
Q Consensus       459 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  532 (538)
                         ..++|||+|+|.|+|++||.+|++++++.||++| ++++.++  .+ ..+  ....+ .....+.|++++|.
T Consensus       329 ---~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~-~~~--~~~~~-~~~~~lpv~~~~~~  394 (398)
T 4fb2_A          329 ---NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPN--KE-CEW--LMGQV-AGMLHVPIIFPKGK  394 (398)
T ss_dssp             ---CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTT--SC-CEE--ECSSB-CEEEECEEECCCCC
T ss_pred             ---CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCC--CC-cee--ccccc-cccceeEEEEcCCC
Confidence               3579999999999999999999999999999999 9999865  21 222  22323 33467889988874


No 45 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=9.3e-58  Score=447.04  Aligned_cols=352  Identities=18%  Similarity=0.230  Sum_probs=287.1

Q ss_pred             CccchHHHHHHHhhCCeeEEEcC-CcceEEecCHHHHHHHHhhCCcccccCcccc----cchhh--ccCCCceEeccCch
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLG-MHRALIVSNWEIAKECFTTNDKVFCNRIKAL----APEIL--GYNYAMFGFSPYGP  135 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~-~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~g~  135 (538)
                      .+++..+.+|+++ |||++++++ +.++++|+||+++++++.++  .|+.++...    .....  .......++..+|+
T Consensus        29 ~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  105 (417)
T 3tyw_A           29 FAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP  105 (417)
T ss_dssp             TSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred             cCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCCc
Confidence            6788999999998 999999986 48899999999999999886  566543211    11111  00112234677899


Q ss_pred             hHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccC
Q 036916          136 YWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRG  214 (538)
Q Consensus       136 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~  214 (538)
                      .|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        |+ ++|+..++ ..+++++++.+ ||.++ +.
T Consensus       106 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~d~~~~~~~~~~~~vi~~~-~G~~~-~~  173 (417)
T 3tyw_A          106 EHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLAA--------GG-PVDLVSAYANAVSTSVICEL-LGIPR-HD  173 (417)
T ss_dssp             HHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHTHHHHHHHHHHHH-HTCCT-TT
T ss_pred             HHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhh--------CC-CcchHHHHHHHHHHHHHHHH-hCCCH-HH
Confidence            9999999998 89999999999999999999999998764        54 79999988 57899999987 99887 22


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchh
Q 036916          215 GTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVV  294 (538)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  294 (538)
                              .+   .+.+....+...         .+         ..+...+..+.+.+++.+.+++++++         
T Consensus       174 --------~~---~~~~~~~~~~~~---------~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~---------  215 (417)
T 3tyw_A          174 --------LE---FFRDVTRISGSR---------NS---------TAEQVSEALGGLFGLLGGLVAERREE---------  215 (417)
T ss_dssp             --------TT---HHHHHHHHHHSS---------SS---------CTTHHHHHHHHHHHHHHHHHHHHHSS---------
T ss_pred             --------HH---HHHHHHHHHhcc---------cC---------CHHHHHHHHHHHHHHHHHHHHHHhhC---------
Confidence                    11   122222222110         01         12456677788888888888877652         


Q ss_pred             cccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 036916          295 KEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVI  374 (538)
Q Consensus       295 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  374 (538)
                       ...|+++.|++...++    +...++++..++..+++||+|||+++++|++++|++||++|+++++|++          
T Consensus       216 -~~~d~l~~ll~~~~~~----~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------  280 (417)
T 3tyw_A          216 -PRDDLISKLVTDHLVP----GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD----------  280 (417)
T ss_dssp             -CCSSHHHHHHHHTTTT----TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG----------
T ss_pred             -CCCCHHHHHHHhcccC----CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH----------
Confidence             3469999999832221    1123788999999999999999999999999999999999999999965          


Q ss_pred             hhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCC
Q 036916          375 ESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKD  454 (538)
Q Consensus       375 ~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~  454 (538)
                              |+++||+|+||++|+++..++|++++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.     
T Consensus       281 --------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----  347 (417)
T 3tyw_A          281 --------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD-----  347 (417)
T ss_dssp             --------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC-----
T ss_pred             --------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC-----
Confidence                    7999999999999999986789999999999999999999999999999999999999999999993     


Q ss_pred             ccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          455 IDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       455 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                             ..++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus       348 -------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          348 -------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             -------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             -------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence                   3479999999999999999999999999999999 9999754


No 46 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=3.7e-58  Score=449.88  Aligned_cols=380  Identities=18%  Similarity=0.241  Sum_probs=299.4

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcc-----cc-c--chhhccC-CCceEeccC
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIK-----AL-A--PEILGYN-YAMFGFSPY  133 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~~  133 (538)
                      .+++.++.++ ++||||++ + ++.+.++|+||++++++|.++.  |++++.     .. .  ...++.. + ..++..+
T Consensus        26 ~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~   99 (419)
T 1q5d_A           26 EDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKK-YGLFGLP   99 (419)
T ss_dssp             TCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHH-HSTTTSC
T ss_pred             hChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcc-cccccCC
Confidence            5678889998 78999999 6 6678999999999999998874  777651     10 0  0111100 1 1235668


Q ss_pred             chhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH-HHHHHHHHHHHHHhccccc
Q 036916          134 GPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI-FNALTFNVATRMVVGKRLV  212 (538)
Q Consensus       134 g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~-~~~~~~~~i~~~~fG~~~~  212 (538)
                      |+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+        .+  ++|+... ...+++++++.+ ||.+. 
T Consensus       100 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--------~~--~~d~~~~~~~~~~~~vi~~~-fG~~~-  166 (419)
T 1q5d_A          100 PEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG--------QE--EFDVVRDYAEGIPMRAISAL-LKVPA-  166 (419)
T ss_dssp             HHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT--------SS--CEETTTTTGGGSHHHHHHHH-TTCCG-
T ss_pred             chHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh--------cC--CCCHHHHHHHHHHHHHHHHH-hCCCH-
Confidence            999999999998 8999999999999999999999987742        22  6898864 489999999998 99887 


Q ss_pred             cCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 036916          213 RGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQ  292 (538)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  292 (538)
                      +          . ...+.+....+......    ..+|+.     +...++..+..+.+.+++.+.+++++++       
T Consensus       167 ~----------~-~~~~~~~~~~~~~~~~~----~~~P~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------  219 (419)
T 1q5d_A          167 E----------C-DEKFRRFGSATARALGV----GLVPRV-----DEETKTLVASVTEGLALLHGVLDERRRN-------  219 (419)
T ss_dssp             G----------G-HHHHHHHHHHHHHHTTT----TTSSCC-----CSCHHHHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred             H----------H-HHHHHHHHHHHHHhccc----ccccCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence            2          1 12344444444432211    122321     1223566777888889999999887652       


Q ss_pred             hhcccc-cHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC
Q 036916          293 VVKEEN-DFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRER  371 (538)
Q Consensus       293 ~~~~~~-d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  371 (538)
                         ... |+++.|++.. +..   ....++++..++..+++||+|||+++++|++++|++||++|+++++|++       
T Consensus       220 ---~~~~dll~~ll~~~-~~~---~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------  285 (419)
T 1q5d_A          220 ---PLENDVLTMLLQAE-ADG---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-------  285 (419)
T ss_dssp             ---CCSSCHHHHHHHHH-HSS---TTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------
T ss_pred             ---CCCCCHHHHHHhhh-ccC---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------
Confidence               234 8999999843 211   1123788999999999999999999999999999999999999999843       


Q ss_pred             CCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCC
Q 036916          372 QVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTT  451 (538)
Q Consensus       372 ~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~  451 (538)
                                 |+++||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||-  
T Consensus       286 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--  352 (419)
T 1q5d_A          286 -----------LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT--  352 (419)
T ss_dssp             -----------GHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred             -----------HHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC--
Confidence                       8999999999999999966799999999999999999999999999999999999999999999941  


Q ss_pred             CCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeecc
Q 036916          452 HKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTP  530 (538)
Q Consensus       452 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (538)
                                ..++|||+|+|.|+|++||++|++++++.||++| ++++.++     ..+  ..+.+.....++.|++++
T Consensus       353 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~~--~~~~~~~~~~~l~v~~~~  415 (419)
T 1q5d_A          353 ----------SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET-----PVF--GYHPAFRNIESLNVILKP  415 (419)
T ss_dssp             ----------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-----CEE--CCCSSBCCEEECEEESSC
T ss_pred             ----------CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC-----ccc--ccccccCCCceeEEEEec
Confidence                      3579999999999999999999999999999999 8999764     222  224456667899999999


Q ss_pred             CC
Q 036916          531 RL  532 (538)
Q Consensus       531 r~  532 (538)
                      |.
T Consensus       416 r~  417 (419)
T 1q5d_A          416 SK  417 (419)
T ss_dssp             C-
T ss_pred             CC
Confidence            86


No 47 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=9.6e-58  Score=445.55  Aligned_cols=373  Identities=15%  Similarity=0.247  Sum_probs=291.2

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCccc-ccchhhcc--CCCceEeccCchhHH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKA-LAPEILGY--NYAMFGFSPYGPYWR  138 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~g~~w~  138 (538)
                      .+++..+.+| ++||||+++++ ++.+.++|+||+.++++|.++  .|++++.. .....+..  .+.+ ++..+|+.|+
T Consensus        37 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~-l~~~dg~~h~  112 (417)
T 2y5n_A           37 LTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGG-LLSMDPPEHS  112 (417)
T ss_dssp             CCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCS-GGGCCTTHHH
T ss_pred             cCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccccccc-CccCCchHHH
Confidence            5678899999 89999999997 788999999999999999875  35554422 11100111  1223 3567899999


Q ss_pred             HHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH-HHHHHHHHHHHhccccccCCCC
Q 036916          139 QIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN-ALTFNVATRMVVGKRLVRGGTT  217 (538)
Q Consensus       139 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~  217 (538)
                      ++|++++ +.|+...++.+.+.+.++++++++.+.+.        +. ++|+...+. .+++++++. +||.+.      
T Consensus       113 ~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~-~vdl~~~~~~~~~~~vi~~-~~G~~~------  175 (417)
T 2y5n_A          113 RLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAAT--------GQ-PADLVAMFARQLPVRVICE-LLGVPS------  175 (417)
T ss_dssp             HHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHTTTTHHHHHHHH-HHTCCG------
T ss_pred             HHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhC--------CC-CeeHHHHHHHHhHHHHHHH-HcCCCH------
Confidence            9999998 78999999999999999999999988643        32 599997764 699999997 699877      


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhccc
Q 036916          218 NHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEE  297 (538)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  297 (538)
                           +. ...+.+....++.         ...    .    ..++..+..+.+.+++.+.++++++.          ..
T Consensus       176 -----~~-~~~~~~~~~~~~~---------~~~----~----~~~~~~~~~~~l~~~~~~~i~~r~~~----------~~  222 (417)
T 2y5n_A          176 -----AD-HDRFTRWSGAFLS---------TAE----V----TAEEMQEAAEQAYAYMGDLIDRRRKE----------PT  222 (417)
T ss_dssp             -----GG-HHHHHHHHHTTST---------TCC----C----CHHHHHHHHHHHHHHHHHHHHHHHHS----------CC
T ss_pred             -----HH-HHHHHHHHHHHhc---------ccC----C----CHHHHHHHHHHHHHHHHHHHHHHHhC----------CC
Confidence                 11 1222222211111         000    0    12456677778888888888887652          23


Q ss_pred             ccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhh
Q 036916          298 NDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESD  377 (538)
Q Consensus       298 ~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  377 (538)
                      .|+++.|++ ..+.   .....++++..++..+++||+|||+++++|++++|++||++|+++++|++             
T Consensus       223 ~dll~~ll~-~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------  285 (417)
T 2y5n_A          223 DDLVSALVQ-ARDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE-------------  285 (417)
T ss_dssp             SSHHHHHHH-CCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------
T ss_pred             CCHHHHHHh-hhcc---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------
Confidence            589999997 3221   11123888999999999999999999999999999999999999999854             


Q ss_pred             hcccHHHHHHHHhhccCCCCCC-CCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCcc
Q 036916          378 IKNLVYLQAIVKETLRLCPAAP-LSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDID  456 (538)
Q Consensus       378 ~~~lp~l~~~i~E~lRl~p~~~-~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~  456 (538)
                           |+++||+|+||++|+++ ..++|++++|++++|+.|||||.|.++.+++||||++|+||++|+||||.       
T Consensus       286 -----~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------  353 (417)
T 2y5n_A          286 -----LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP-------  353 (417)
T ss_dssp             -----GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS-------
T ss_pred             -----HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC-------
Confidence                 79999999999999999 55699999999999999999999999999999999999999999999983       


Q ss_pred             ccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceee
Q 036916          457 VRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVL  527 (538)
Q Consensus       457 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (538)
                           ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ..++.+  ..+........+.|+
T Consensus       354 -----~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~~~~~--~~~~~~~~~~~lpv~  416 (417)
T 2y5n_A          354 -----NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIP--ETQLRW--SEGMLLRGPLELPVV  416 (417)
T ss_dssp             -----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GGGCCB--CCCSSBCCBSCCEEE
T ss_pred             -----CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCC--Ccccee--ccCcccCCcceeEEe
Confidence                 2479999999999999999999999999999999 5998764  111222  233444455666665


No 48 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=5e-58  Score=446.70  Aligned_cols=374  Identities=15%  Similarity=0.200  Sum_probs=294.7

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCC--cceEEecCHHHHHHHHhhCCcccccCcccc-----cchhhccCCCceEeccCch
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGM--HRALIVSNWEIAKECFTTNDKVFCNRIKAL-----APEILGYNYAMFGFSPYGP  135 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~--~~~v~v~dpe~~~~il~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~  135 (538)
                      .+++..+++++ +||||+++++++  .+.++|++|+++++++.++  .|++++...     .....+..+. .++..+|+
T Consensus        27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~-~l~~~dg~  102 (411)
T 2dkk_A           27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPG-SLAFADQP  102 (411)
T ss_dssp             SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTT-CSTTCCTT
T ss_pred             ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhcccc-ccccCCch
Confidence            45668898887 899999999764  6799999999999999874  465543221     1111111022 24667899


Q ss_pred             hHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH-HHHHHHHHHHHhccccccC
Q 036916          136 YWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN-ALTFNVATRMVVGKRLVRG  214 (538)
Q Consensus       136 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~  214 (538)
                      .|+++|++++ +.|+...++.+.+.+.+.++++++.+.+.        |. ++|+..++. .+++++++. +||.+.   
T Consensus       103 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------g~-~~dl~~~~~~~~~~~vi~~-l~G~~~---  168 (411)
T 2dkk_A          103 DHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILAE--------GP-PADLVERVLEPFPIAVVSE-VMGVPA---  168 (411)
T ss_dssp             HHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-CEEHHHHTTTHHHHHHHHH-HHTCCS---
T ss_pred             HHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CeehHHHHHHHHHHHHHHH-HhCCCH---
Confidence            9999999998 78999999999999999999999998754        44 799998776 699999998 599887   


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchh
Q 036916          215 GTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVV  294 (538)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  294 (538)
                              +. ...+.+..    ..+     ....+         ..++..+..+.+.+++.+.+++++++         
T Consensus       169 --------~~-~~~~~~~~----~~~-----~~~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~---------  212 (411)
T 2dkk_A          169 --------AD-RERVHSWT----RQI-----ISTSG---------GAEAAERAKRGLYGWITETVRARAGS---------  212 (411)
T ss_dssp             --------SH-HHHHHHHH----GGG-----CSSCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC---------
T ss_pred             --------HH-HHHHHHHH----HHH-----Hhccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence                    21 11222211    111     01111         12456667777888888888765541         


Q ss_pred             cccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 036916          295 KEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVI  374 (538)
Q Consensus       295 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  374 (538)
                       ...|+++.|++. .++    ....++++.+++..+++|| |||+.+++|++++|++||++|+++++|++          
T Consensus       213 -~~~dll~~ll~~-~~~----~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------  275 (411)
T 2dkk_A          213 -EGGDVYSMLGAA-VGR----GEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG----------  275 (411)
T ss_dssp             -CSSCHHHHHHHH-HHT----TSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT----------
T ss_pred             -CCCCHHHHHHHh-cCC----CCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------
Confidence             235899999984 221    1123778999999999999 99999999999999999999999999975          


Q ss_pred             hhhhcccHHHHHHHHhhccCCCCCCCC-cceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCC
Q 036916          375 ESDIKNLVYLQAIVKETLRLCPAAPLS-IPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHK  453 (538)
Q Consensus       375 ~~~~~~lp~l~~~i~E~lRl~p~~~~~-~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~  453 (538)
                              |+++||+|+||++|+++.. ++|++++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.    
T Consensus       276 --------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----  343 (411)
T 2dkk_A          276 --------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----  343 (411)
T ss_dssp             --------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----
T ss_pred             --------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----
Confidence                    7899999999999999955 699999999999999999999999999999999999999999999995    


Q ss_pred             CccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccC
Q 036916          454 DIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       454 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  531 (538)
                              ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ..++.+  ..+.......++.|++++|
T Consensus       344 --------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~--~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          344 --------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVP--AEQVAW--RRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             --------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC--GGGCCB--CCSSSBCCBSCCEEECCCC
T ss_pred             --------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCC--cccccc--ccCcccCCcceeEEEeccC
Confidence                    2479999999999999999999999999999999 8999764  111222  2344556678999999887


No 49 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=7.4e-58  Score=447.90  Aligned_cols=379  Identities=17%  Similarity=0.219  Sum_probs=288.7

Q ss_pred             CccchHHHHHHHhhCCeeEEEcC--CcceEEecCHHHHHHHHhhCCcccccCccc-------c---cc---h-hhccCCC
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLG--MHRALIVSNWEIAKECFTTNDKVFCNRIKA-------L---AP---E-ILGYNYA  126 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~--~~~~v~v~dpe~~~~il~~~~~~~~~~~~~-------~---~~---~-~~~~~~~  126 (538)
                      .+++.++.++. +||||+++++|  +.++++|+||+.+++++.++  .|++++..       .   ..   . .....+.
T Consensus        20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (425)
T 2z3t_A           20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN   96 (425)
T ss_dssp             HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred             cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence            45678888886 49999999987  67899999999999999875  57766431       0   00   0 0111112


Q ss_pred             ceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHH
Q 036916          127 MFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRM  205 (538)
Q Consensus       127 ~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~  205 (538)
                      + ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+        .|  ++|+...+ ..+++++++.+
T Consensus        97 ~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--------~g--~~dl~~~~~~~~~~~vi~~~  164 (425)
T 2z3t_A           97 W-LVFLDPPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA--------QR--RPDLVEGFAAPLPILVISAL  164 (425)
T ss_dssp             C-GGGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT--------SS--SCBHHHHTTTHHHHHHHHHH
T ss_pred             c-cccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--------cC--CccHHHHHHHHHHHHHHHHH
Confidence            3 35567999999999998 8999999999999999999999988743        23  68998755 78999999998


Q ss_pred             HhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 036916          206 VVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQK  285 (538)
Q Consensus       206 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  285 (538)
                       ||.+.           ++ ...+.+....+....      ..+|    ++ +...++..+..+.+.+++.+.++++++ 
T Consensus       165 -~G~~~-----------~~-~~~~~~~~~~~~~~~------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~-  219 (425)
T 2z3t_A          165 -LGIPE-----------ED-HTWLRANAVALQEAS------TTRA----RD-GRGYARAEAASQEFTRYFRREVDRRGG-  219 (425)
T ss_dssp             -HTCCG-----------GG-HHHHHHHHHHHHTTC------TTCC----C----HHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             -hCCCH-----------HH-HHHHHHHHHHHHhhc------cccC----CC-HHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence             99887           11 123333333332211      1112    10 112345566677777777777766543 


Q ss_pred             ccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHH
Q 036916          286 RISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDT  365 (538)
Q Consensus       286 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~  365 (538)
                               +...|+++.|++...++    ....++++.+++..+++||+|||+++++|++++|++||++|+++++|++ 
T Consensus       220 ---------~~~~dll~~ll~~~~~~----~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-  285 (425)
T 2z3t_A          220 ---------DDRDDLLTLLVRARDTG----SPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE-  285 (425)
T ss_dssp             -------------CHHHHHHHHHHTT----CCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG-
T ss_pred             ---------CCCCCHHHHHHHhhccC----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH-
Confidence                     12468999999843221    1123788999999999999999999999999999999999999999864 


Q ss_pred             hhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCC
Q 036916          366 HIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRP  445 (538)
Q Consensus       366 ~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P  445 (538)
                                       |+++||+|+||++|+++ .++|++++|++++|+.||||+.|.++.+++||||++|+||++|+|
T Consensus       286 -----------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P  347 (425)
T 2z3t_A          286 -----------------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDV  347 (425)
T ss_dssp             -----------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCT
T ss_pred             -----------------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCC
Confidence                             89999999999999999 669999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccc
Q 036916          446 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPL  524 (538)
Q Consensus       446 ~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (538)
                      +||.            ..++|||+|+|.|+|++||++|++++++.||++| +++ .++  .. ..+  ..+.+.....++
T Consensus       348 eR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~--~~-~~~--~~~~~~~~~~~l  409 (425)
T 2z3t_A          348 HRAA------------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGA--HE-VEY--ADDMVFHGPTRL  409 (425)
T ss_dssp             TSCS------------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSC--EE-EEE--CSCSSBCCEEEE
T ss_pred             CCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCC--Cc-ccc--ccccccCCccee
Confidence            9995            2479999999999999999999999999999999 899 654  11 122  234455667888


Q ss_pred             eeeeccC
Q 036916          525 QVLLTPR  531 (538)
Q Consensus       525 ~~~~~~r  531 (538)
                      .|++++.
T Consensus       410 pv~~~~~  416 (425)
T 2z3t_A          410 LLDLPDA  416 (425)
T ss_dssp             EECCC--
T ss_pred             eEEecch
Confidence            8888765


No 50 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.4e-59  Score=472.45  Aligned_cols=419  Identities=14%  Similarity=0.143  Sum_probs=293.6

Q ss_pred             CCCCCCCCCCCcCccccccccccC--CCCccchHHHHHHHhhCC-eeEEEcCCcce-------EEecCHHHHHHHHhhCC
Q 036916           37 TDKKTVPEPGGAWPLIGHLHLLGG--QKPAAHVTLGSIADKHGP-IFMIKLGMHRA-------LIVSNWEIAKECFTTND  106 (538)
Q Consensus        37 ~~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~-v~~i~~~~~~~-------v~v~dpe~~~~il~~~~  106 (538)
                      ..+.+.||||.++|++|+++.+..  ...+++.++.++.++||+ ||++++++.++       +++.|++..+.++....
T Consensus        24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~  103 (495)
T 3dsk_A           24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK  103 (495)
T ss_dssp             CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence            345678999999999999987741  125778999999999999 99999998888       66777777766664421


Q ss_pred             ----cccccCcccccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccC
Q 036916          107 ----KVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGD  182 (538)
Q Consensus       107 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~  182 (538)
                          ..+........ ..++......++..+|+.|+++|+++. +.|+... ..+.+.+.++++++++.|.+.     ..
T Consensus       104 v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~-----~~  175 (495)
T 3dsk_A          104 VEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKE-----LS  175 (495)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHH-----HH
T ss_pred             ccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHH-----hc
Confidence                11211111112 344422223345678999999999998 7787654 888999999999999988764     12


Q ss_pred             CCCccccHHHHHHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccccccccccccc-ccccccch
Q 036916          183 SGKALVEMKEIFNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLR-WLDLDGIE  261 (538)
Q Consensus       183 ~g~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~~~~~~~~  261 (538)
                      +++ ++|+.+++..+++++++.++||.+.....      ....   +...+.......       ..|.+. .++     
T Consensus       176 ~~~-~vdl~~~~~~~~~~~i~~~~~G~~~~~~~------~~~~---~~~~~~~~~~~~-------~~p~~~~~~p-----  233 (495)
T 3dsk_A          176 LKG-KADFGGSSDGTAFNFLARAFYGTNPADTK------LKAD---APGLITKWVLFN-------LHPLLSIGLP-----  233 (495)
T ss_dssp             HHS-SEESHHHHHHHHHHHHHHHHHSCCGGGST------TTTC---HHHHHHHHHHHH-------HGGGCCCSSC-----
T ss_pred             cCC-CccHHHHHHHHHHHHHHHHHcCCCcchhh------hhhh---HHHHHHHHHHHh-------hhhHhHhccH-----
Confidence            234 79999999999999999999999872210      0111   122222221111       112111 111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCcc----hhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHH-HHhccc
Q 036916          262 KSMKRTAKELDQILEGWLEEHKQKRISSDDQ----VVKEENDFMDVMLSALADAEELPSFDADTITKATCLAL-ILGGTD  336 (538)
Q Consensus       262 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~-~~Ag~~  336 (538)
                                 .++.+++.+++.........    ..+.-.+.++.+++.. ++.   + ..++++..+++.+ ++||+|
T Consensus       234 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~---~-l~~~ei~~~~~~~l~~ag~~  297 (495)
T 3dsk_A          234 -----------RVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEA-DKL---G-ISREEATHNLLFATCFNTWG  297 (495)
T ss_dssp             -----------HHHHHHHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHH-HHT---T-CCHHHHHHHHHHHHHTTHHH
T ss_pred             -----------HHHHHHHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHH-HhC---C-CCHHHHHHHHHHHHHHHhhh
Confidence                       11111211111000000000    0001113334555533 211   1 2266677655555 499999


Q ss_pred             hhHHHHHHHHHHHHh-ChHHHHHHHHHHHHhhcCC-CCCChhhhcccHHHHHHHHhhccCCCCCCCCcceecccccccc-
Q 036916          337 TTTFTLTWALTLTLN-HLDVLKKVQNELDTHIGRE-RQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIA-  413 (538)
Q Consensus       337 tta~~l~~~l~~L~~-~P~~~~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~-  413 (538)
                      ||+.+++|++++|+. ||++|+++++|++++++.+ +.++.+++.+|||+++||+|+||++|+++.. .|.+.+|+++. 
T Consensus       298 tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~a~~d~~l~~  376 (495)
T 3dsk_A          298 GMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQ-YGRAKKDLVIES  376 (495)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEEEC
T ss_pred             hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCcccc-ceeecCCeEecc
Confidence            999999999999996 9999999999999998764 6799999999999999999999999999987 57799999994 


Q ss_pred             ---ceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCc--cc--cCCCCccccCCCCCCCCCChHHHHHHHHH
Q 036916          414 ---GYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDI--DV--RGQNFELIPFGSGRRGCPGISFALQVLLL  486 (538)
Q Consensus       414 ---g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~--~~--~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  486 (538)
                         ||.||||+.|.++.+++||||++|+||++|+|+||++.++..  ..  -+....+++||+|+|.|+|++||.+|+++
T Consensus       377 ~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~  456 (495)
T 3dsk_A          377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARL  456 (495)
T ss_dssp             SSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHH
T ss_pred             CCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHH
Confidence               999999999999999999999999999999999999752100  00  01122456666777999999999999999


Q ss_pred             HHHHHHhcceeeCCCC
Q 036916          487 TLASLLHGFEFATPGP  502 (538)
Q Consensus       487 ~l~~ll~~~~~~~~~~  502 (538)
                      +++.||++|++...++
T Consensus       457 ~l~~ll~~f~~~~~~~  472 (495)
T 3dsk_A          457 FVIEIFRRYDSFDIEV  472 (495)
T ss_dssp             HHHHHHHHEEEEEEEE
T ss_pred             HHHHHHHHCceEeCCC
Confidence            9999999999877653


No 51 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.4e-57  Score=443.27  Aligned_cols=374  Identities=15%  Similarity=0.169  Sum_probs=294.3

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHHh
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRK  142 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~  142 (538)
                      .+++.++.++++ |||||++.  . +.++|+||+++++++.++. .|++++... ....  .+. .++..+|+.|+++|+
T Consensus        18 ~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~-~l~~~~g~~h~~~R~   88 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALP-MMIDMDDPAHLLRRK   88 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCS-SGGGCCTTHHHHHHH
T ss_pred             cChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--ccc-cccccCchHHHHHHH
Confidence            567889999987 99999664  3 7999999999999998763 677665322 1111  122 245668999999999


Q ss_pred             hhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHH-HHHHHHHHHHHHHHhccccccCCCCCCcc
Q 036916          143 IATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKE-IFNALTFNVATRMVVGKRLVRGGTTNHQE  221 (538)
Q Consensus       143 ~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~-~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  221 (538)
                      +++ +.|+...++.+.+.+.++++++++.+.+         ++ .+|+.. +...+++++++.+ ||.+. +        
T Consensus        89 ~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~d~~~~~~~~~~~~vi~~~-fG~~~-~--------  147 (398)
T 2xkr_A           89 LVN-AGFTRKRVKDKEASIAALCDTLIDAVCE---------RG-ECDFVRDLAAPLPMAVIGDM-LGVRP-E--------  147 (398)
T ss_dssp             HHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT---------TS-EEEHHHHTTTHHHHHHHHHH-HTCCG-G--------
T ss_pred             Hhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh---------cC-CccHHHHHHHHHHHHHHHHH-hCCCH-H--------
Confidence            998 8999999999999999999999887642         23 699994 5568999999998 99987 1        


Q ss_pred             chHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHH
Q 036916          222 IDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFM  301 (538)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l  301 (538)
                        . ...+.+....+....        .|.  +++  ...++..+..+.+.+++.+.++++++.          ...|++
T Consensus       148 --~-~~~~~~~~~~~~~~~--------~~~--~~p--~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll  202 (398)
T 2xkr_A          148 --Q-RDMFLRWSDDLVTFL--------SSH--VSQ--EDFQITMDAFAAYNDFTRATIAARRAD----------PTDDLV  202 (398)
T ss_dssp             --G-HHHHHHHHHHHHHHH--------TSC--CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHH
T ss_pred             --H-HHHHHHHHHHHHhcc--------Ccc--cch--hhHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHH
Confidence              1 123344444333321        111  111  123456677778888888888887651          246899


Q ss_pred             HHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcc
Q 036916          302 DVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKN  380 (538)
Q Consensus       302 ~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  380 (538)
                      +.|++ ..+    ++... ++++..++..+++||+|||+++++|++++|++||++|+++++|++                
T Consensus       203 ~~ll~-~~~----~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------  261 (398)
T 2xkr_A          203 SVLVS-SEV----DGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS----------------  261 (398)
T ss_dssp             HHHHH-CCB----TTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG----------------
T ss_pred             HHHHH-hhc----cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence            99997 322    12223 888999999999999999999999999999999999999999976                


Q ss_pred             cHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCC
Q 036916          381 LVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQ  460 (538)
Q Consensus       381 lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~  460 (538)
                        |+++||+|+||++|+++. ++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||..          
T Consensus       262 --~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------  328 (398)
T 2xkr_A          262 --LLPGAIEEMLRWTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------  328 (398)
T ss_dssp             --GHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------
T ss_pred             --HHHHHHHHHHhhcccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------
Confidence              799999999999999997 6999999999999999999999999999999999999999999999842          


Q ss_pred             CCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCcc-CccCccccccccceeeeccCC
Q 036916          461 NFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLS-EGVGLTNLKATPLQVLLTPRL  532 (538)
Q Consensus       461 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~  532 (538)
                        .++|||+|+|.|+|++||++|++++++.||++| ++++.++     ..+. ...+.......++.|++++|.
T Consensus       329 --~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-----~~~~~~~~~~~~~~~~~lpv~~~p~~  395 (398)
T 2xkr_A          329 --SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVAD-----DSVLPLRPANFVSGLESMPVVFTPSP  395 (398)
T ss_dssp             --CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCT-----TCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred             --CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCC-----cceecccCcccccCccceeEEecCCC
Confidence              379999999999999999999999999999999 5999743     1221 012333445678888888774


No 52 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=5.8e-58  Score=447.02  Aligned_cols=386  Identities=16%  Similarity=0.204  Sum_probs=296.6

Q ss_pred             cccccccccCC--CCccchHHHHHHHhhCCee-----EEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc--cc-hh
Q 036916           51 LIGHLHLLGGQ--KPAAHVTLGSIADKHGPIF-----MIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL--AP-EI  120 (538)
Q Consensus        51 ~~G~~~~~~~~--~~~~~~~~~~~~~~yG~v~-----~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~--~~-~~  120 (538)
                      +.|+.+++...  ..+++.+++++. +||||+     ++++  .+.++|+||+++++++.++ ..|++++...  .. ..
T Consensus        11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~   86 (414)
T 2uuq_A           11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELE   86 (414)
T ss_dssp             --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHH
T ss_pred             hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccc
Confidence            34555555322  256788888885 789999     7776  6799999999999999986 5677765432  11 12


Q ss_pred             h-c-cCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHH-HHHHHH
Q 036916          121 L-G-YNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMK-EIFNAL  197 (538)
Q Consensus       121 ~-~-~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~-~~~~~~  197 (538)
                      + + ..+.+ ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        +  .+|+. +++..+
T Consensus        87 ~~~~~~~~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~--~vdl~~~~~~~~  154 (414)
T 2uuq_A           87 MIGLHDTPP-MVMQDPPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRAN--------G--GGDIVTELFKPL  154 (414)
T ss_dssp             HHTCSSSCC-GGGCCTTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHT--------T--EEEHHHHTTTHH
T ss_pred             ccccccccc-cccCCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhc--------C--CccHHHHHHHHh
Confidence            2 2 22223 35568999999999998 89999999999999999999999988642        2  69997 556799


Q ss_pred             HHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccccccccc-ccccccccccchHHHHHHHHHHHHHHH
Q 036916          198 TFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSV-PFLRWLDLDGIEKSMKRTAKELDQILE  276 (538)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~  276 (538)
                      ++++++. +||.++ +          + ...+.+....++..       ..+ |..         ....+..+.+.+++.
T Consensus       155 ~~~vi~~-~~G~~~-~----------~-~~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~  205 (414)
T 2uuq_A          155 PSMVVAH-YLGVPE-E----------D-WTQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFT  205 (414)
T ss_dssp             HHHHHHH-HTTCCG-G----------G-HHHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHH
T ss_pred             HHHHHHH-HhCCCH-H----------H-HHHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHH
Confidence            9999998 699887 2          1 12233333333321       011 210         123345667778888


Q ss_pred             HHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHH
Q 036916          277 GWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDV  355 (538)
Q Consensus       277 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~  355 (538)
                      +.+++++++          ...|+++.|++ ..+.+  ++... ++++..++..+++||+|||+++++|++++|++||++
T Consensus       206 ~~i~~r~~~----------~~~dll~~ll~-~~~~~--~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~  272 (414)
T 2uuq_A          206 GLIERRRTE----------PADDAISHLVA-AGVGA--DGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQ  272 (414)
T ss_dssp             HHHHHHTTS----------CCSSHHHHHHH-TTTTC--TTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHhC----------CCCCHHHHHHh-ccccc--CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHH
Confidence            888876542          23589999997 32210  12234 788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCC
Q 036916          356 LKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPN  435 (538)
Q Consensus       356 ~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~  435 (538)
                      |+++++|++                  |+++||+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||+
T Consensus       273 ~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~  333 (414)
T 2uuq_A          273 RRLLLDDPE------------------GIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDER  333 (414)
T ss_dssp             HHHHHHCGG------------------GHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHH
T ss_pred             HHHHHhCHH------------------HHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHH
Confidence            999999863                  89999999999999999 66999999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCc
Q 036916          436 IW-EEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEG  513 (538)
Q Consensus       436 ~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~  513 (538)
                      +| +||++|+||||.            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++    ++.+  .
T Consensus       334 ~~G~dP~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~~~~--~  395 (414)
T 2uuq_A          334 QYGPDAAELDVTRCP------------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES----RIVW--S  395 (414)
T ss_dssp             HHCTTTTSCCTTCCC------------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----GCEE--C
T ss_pred             HhCCCchhcCCCCCC------------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----Cccc--c
Confidence            99 999999999984            2479999999999999999999999999999999 6998732    1222  2


Q ss_pred             cCccccccccceeeeccC
Q 036916          514 VGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       514 ~~~~~~~~~~~~~~~~~r  531 (538)
                      .+.+..+..++.|++++|
T Consensus       396 ~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          396 GGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             CCSSBCCEEECEEEEC--
T ss_pred             ccccccCcceeEEEecCC
Confidence            344566778999999887


No 53 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=4.5e-58  Score=450.90  Aligned_cols=393  Identities=14%  Similarity=0.149  Sum_probs=298.0

Q ss_pred             CCCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEE--------cCCcceEEecCHHHHHHHHhhCCcccccC
Q 036916           41 TVPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIK--------LGMHRALIVSNWEIAKECFTTNDKVFCNR  112 (538)
Q Consensus        41 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~--------~~~~~~v~v~dpe~~~~il~~~~~~~~~~  112 (538)
                      ..|++|.++++++......   .+++..+.++ ++||||+++.        +|+.++++|++|+++++++++. ..|+.+
T Consensus        18 ~~p~~~~~~~~~~~~~~~~---~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~   92 (433)
T 3ivy_A           18 PSPNLPPGFDFTDPAIYAE---RLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSY   92 (433)
T ss_dssp             --CCCCTTCCTTCHHHHTT---CCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEEST
T ss_pred             CCCCCCCCCCCCCHHHhhc---CCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCC
Confidence            4566776777666554332   4678899999 8899999998        4447899999999999999765 567766


Q ss_pred             cccccch--------hhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 036916          113 IKALAPE--------ILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSG  184 (538)
Q Consensus       113 ~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g  184 (538)
                      +......        ...... ..++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        +
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~  162 (433)
T 3ivy_A           93 ENGVIPRFKNDIAREDIEVQR-FVMLNMDAPHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAAA--------G  162 (433)
T ss_dssp             TTCSCCCCCTTCCHHHHHGGG-GSGGGCCTTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHHH--------C
T ss_pred             ccccccccccccccccccccc-CCccccChHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhhC--------C
Confidence            5432221        111111 2346778999999999998 89999999999999999999999988643        2


Q ss_pred             CccccHHHHH-HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHH
Q 036916          185 KALVEMKEIF-NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKS  263 (538)
Q Consensus       185 ~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~  263 (538)
                        .+|+..++ ..+++++++.+ ||.+.            +....+.+....+        .....|....       ..
T Consensus       163 --~~d~~~~~~~~~~~~vi~~l-~G~~~------------~~~~~~~~~~~~~--------~~~~~p~~~~-------~~  212 (433)
T 3ivy_A          163 --SGDFVEQVSCELPLQAIAGL-LGVPQ------------EDRGKLFHWSNEM--------TGNEDPEYAH-------ID  212 (433)
T ss_dssp             --EEEHHHHTTSHHHHHHHHHH-HTCCH------------HHHHHHHHHHTTC--------SCCCCGGGTT-------CC
T ss_pred             --CeeHHHHHHHHHHHHHHHHH-cCCCH------------HHHHHHHHHHHHH--------hccCCchhhh-------HH
Confidence              68999988 99999999996 88654            2222222221111        1111222111       13


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHH
Q 036916          264 MKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTL  342 (538)
Q Consensus       264 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l  342 (538)
                      ..+..+.+.+++.++++++++          +...|+++.|++ ..+    ++... ++++..++..+++||+|||++++
T Consensus       213 ~~~~~~~~~~~~~~~i~~r~~----------~~~~dll~~ll~-~~~----~~~~ls~~ei~~~~~~ll~AG~dTTa~~l  277 (433)
T 3ivy_A          213 PKASSAELIGYAMKMAEEKAK----------NPADDIVTQLIQ-ADI----DGEKLSDDEFGFFVVMLAVAGNETTRNSI  277 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-----------------CHHHHHS-CC------CCCCCHHHHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc----------CCCCcHHHHHHh-hhc----CCCCCCHHHHHHHHHHHHHhhhHHHHHHH
Confidence            456677788888888887654          234589999987 222    12233 88899999999999999999999


Q ss_pred             HHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCE
Q 036916          343 TWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTR  422 (538)
Q Consensus       343 ~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~  422 (538)
                      +|++++|++||++|+++++|++                    ++||+|+||++|+++. ++|.+++|++++|+.||||+.
T Consensus       278 ~~~l~~L~~~P~~~~~l~~E~~--------------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~  336 (433)
T 3ivy_A          278 TQGMMAFAEHPDQWELYKKVRP--------------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQR  336 (433)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHCC--------------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCE
T ss_pred             HHHHHHHHHCHHHHHHHHhCcc--------------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCE
Confidence            9999999999999999999975                    6899999999999987 489999999999999999999


Q ss_pred             EEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCC-CCCCCCCChHHHHHHHHHHHHHHHhcce-eeCC
Q 036916          423 LFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFG-SGRRGCPGISFALQVLLLTLASLLHGFE-FATP  500 (538)
Q Consensus       423 v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~  500 (538)
                      |.++.+++||||++|+||++|+|+||.            ..++||| +|+|.|+|++||++|++++++.||++|+ +++.
T Consensus       337 V~~~~~~~~rdp~~f~dp~~F~p~R~~------------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~  404 (433)
T 3ivy_A          337 VVMFYRSANFDEEVFQDPFTFNILRNP------------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPI  404 (433)
T ss_dssp             EEEEHHHHTTCTTTSSSTTSCCTTCCS------------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred             EEEChhhhcCCchhCCCcCccCCCCCC------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEEC
Confidence            999999999999999999999999993            2479999 9999999999999999999999999999 9997


Q ss_pred             CCCCCCCCCccCccCccccccccceeeeccCCC
Q 036916          501 GPGDTEPLDLSEGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                      ++  .   ...  .+........+.|++++|..
T Consensus       405 ~~--~---~~~--~~~~~~g~~~lpv~~~~R~~  430 (433)
T 3ivy_A          405 SA--P---ERL--RSGWLNGIKHWQVDYTGRCP  430 (433)
T ss_dssp             SC--C---EEC--CCSSBCCEEECEEESCC---
T ss_pred             CC--C---cee--ccCcccCcceeEEEEecccc
Confidence            54  1   111  12223334688999998864


No 54 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=1.5e-57  Score=442.86  Aligned_cols=376  Identities=18%  Similarity=0.192  Sum_probs=293.6

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc-cc------hhhccCCCceEeccCch
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL-AP------EILGYNYAMFGFSPYGP  135 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~g~  135 (538)
                      .+++.+++++ ++||||++ +  +.+.++|+||++++++|.++  .|++++... ..      ...+..+.+ ++..+|+
T Consensus        13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~   85 (397)
T 3buj_A           13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDI-ILFQDEP   85 (397)
T ss_dssp             HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTC-GGGCCTT
T ss_pred             cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccc-cccCCch
Confidence            3567778776 58999998 6  47899999999999999863  465543211 00      111110122 3566899


Q ss_pred             hHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHH-HHHHHHHHHHHHHhccccccC
Q 036916          136 YWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEI-FNALTFNVATRMVVGKRLVRG  214 (538)
Q Consensus       136 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~  214 (538)
                      .|+++|++++ +.|+...++.+.+.+.++++++++.+.+         ++ ++|+... ...+++++++.+ ||.+. + 
T Consensus        86 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~dl~~~~~~~~~~~vi~~~-~G~~~-~-  151 (397)
T 3buj_A           86 DHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA---------RG-AMDVVDELAYPLALRAVLGL-LGLPA-A-  151 (397)
T ss_dssp             HHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT---------TT-EEEHHHHTHHHHHHHHHHHH-HTCCG-G-
T ss_pred             hHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh---------cC-CeehHHHHHHHhHHHHHHHH-hCCCH-H-
Confidence            9999999998 7999999999999999999999988753         23 7998755 578999999998 99987 1 


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchh
Q 036916          215 GTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVV  294 (538)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  294 (538)
                               . ...+.+....+.....        +.   ++ +...++..+..+.+.+++.+.++++++.         
T Consensus       152 ---------~-~~~~~~~~~~~~~~~~--------~~---~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------  200 (397)
T 3buj_A          152 ---------D-WGAVGRWSRDVGRTLD--------RG---AS-AEDMRRGHAAIAEFADYVERALARRRRE---------  200 (397)
T ss_dssp             ---------G-HHHHHHHHHHHHGGGC--------SS---CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred             ---------H-HHHHHHHHHHHHhhcC--------CC---CC-hHHHHHHHHHHHHHHHHHHHHHHHHHcC---------
Confidence                     1 1233333333322111        00   11 1123456667778888888888887653         


Q ss_pred             cccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 036916          295 KEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVI  374 (538)
Q Consensus       295 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  374 (538)
                       ...|+++.|++.. +.    +...++++.+++..+++||+|||+++++|++++|++||++|+++++|++          
T Consensus       201 -~~~dll~~ll~~~-~~----~~ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~----------  264 (397)
T 3buj_A          201 -GGEDLLALMLDAH-DR----GLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD----------  264 (397)
T ss_dssp             -CCCSHHHHHHHHH-HT----TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG----------
T ss_pred             -CCCCHHHHHHHhh-hc----CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH----------
Confidence             2358999999843 21    1123888999999999999999999999999999999999999999964          


Q ss_pred             hhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCC
Q 036916          375 ESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKD  454 (538)
Q Consensus       375 ~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~  454 (538)
                              |+++||+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+||||.     
T Consensus       265 --------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-----  330 (397)
T 3buj_A          265 --------LLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP-----  330 (397)
T ss_dssp             --------GHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC-----
T ss_pred             --------HHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC-----
Confidence                    89999999999999999 6699999999999999999999999999999999999999999999994     


Q ss_pred             ccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccCC
Q 036916          455 IDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRL  532 (538)
Q Consensus       455 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  532 (538)
                             ..++|||+|+|.|+|++||++|++++++.| ++| ++++.++  ..++.+  ..+.+..++.++.|++++|.
T Consensus       331 -------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~--~~~~~~--~~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          331 -------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCA--SDALAY--QPRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             -------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSC--STTCCB--CSCSSCCCBSCCEEECCTTC
T ss_pred             -------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCC--Cccccc--ccccccCCCcceeEEecCCC
Confidence                   236999999999999999999999999999 999 8999764  121222  33455667789999999884


No 55 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=7.8e-57  Score=436.87  Aligned_cols=365  Identities=17%  Similarity=0.226  Sum_probs=287.4

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCcccc--cchhhccCCCce-EeccCc----
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKAL--APEILGYNYAMF-GFSPYG----  134 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~g----  134 (538)
                      .+++.++.++ ++||||+++++ ++.+.++|+||+++++++.++  .|++++...  ..... . +.+. ++..+|    
T Consensus        26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~-~~~~~l~~~~g~~~~  100 (404)
T 2xbk_A           26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-R-SPFLDLLISDADAES  100 (404)
T ss_dssp             TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-C-CHHHHTTCBCSCHHH
T ss_pred             cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-c-cccccceeeCCCCCC
Confidence            5678899999 89999999996 788999999999999999875  355544321  11111 1 1221 355678    


Q ss_pred             --hhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhcccc
Q 036916          135 --PYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRL  211 (538)
Q Consensus       135 --~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~  211 (538)
                        +.|+++|++++ +.|+...++.+.+.+.++++++++.+..        .|+ ++|+...+ ..+++++++. +||.+.
T Consensus       101 ~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--------~g~-~~d~~~~~~~~~~~~vi~~-~~G~~~  169 (404)
T 2xbk_A          101 GRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA--------QGP-PGDLHGELTVPFALTVLCE-VIGVPP  169 (404)
T ss_dssp             HHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH--------TCS-SEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred             CCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--------cCC-CeeHHHHHHHHHHHHHHHH-HhCCCH
Confidence              99999999998 7899999999999999999999998864        244 79998766 5699999997 799876


Q ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 036916          212 VRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDD  291 (538)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  291 (538)
                                 +. ...+.+.+..++.   .     ..|           .+..+..+.+.+++.+.++++++.      
T Consensus       170 -----------~~-~~~~~~~~~~~~~---~-----~~~-----------p~~~~~~~~~~~~~~~~i~~r~~~------  212 (404)
T 2xbk_A          170 -----------QR-RAELTTLLAGIAK---L-----DDR-----------EGAVRAQDDLFGYVAGLVEHKRAE------  212 (404)
T ss_dssp             -----------GG-HHHHHHHHHHHTB---S-----SCH-----------HHHHHHHHHHHHHHHHHHHHHHHS------
T ss_pred             -----------HH-HHHHHHHHHHHHh---c-----cCc-----------HHHHHHHHHHHHHHHHHHHHHHhC------
Confidence                       11 1223332222211   0     001           145566777888888888877652      


Q ss_pred             chhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC
Q 036916          292 QVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRER  371 (538)
Q Consensus       292 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  371 (538)
                          ...|+++.| +   +     +...++++..++.++++||+|||+++++|++++|++||++|+++++|++       
T Consensus       213 ----~~~dll~~l-~---~-----~~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------  272 (404)
T 2xbk_A          213 ----PGPDIISRL-N---D-----GELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-------  272 (404)
T ss_dssp             ----CCSSHHHHH-H---S-----SSCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-------
T ss_pred             ----CCCCHHHHh-h---c-----CCCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------
Confidence                234788887 2   1     2123788999999999999999999999999999999999999999975       


Q ss_pred             CCChhhhcccHHHHHHHHhhccCCCCCC-CCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCC
Q 036916          372 QVIESDIKNLVYLQAIVKETLRLCPAAP-LSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLT  450 (538)
Q Consensus       372 ~~~~~~~~~lp~l~~~i~E~lRl~p~~~-~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~  450 (538)
                                 |+++||+|+||++|+++ ..++|++.+|++++|+.|||||.|.++.+++||||++|+||++|+||||. 
T Consensus       273 -----------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-  340 (404)
T 2xbk_A          273 -----------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP-  340 (404)
T ss_dssp             -----------HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS-
T ss_pred             -----------HHHHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC-
Confidence                       79999999999999999 55699999999999999999999999999999999999999999999983 


Q ss_pred             CCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceee
Q 036916          451 THKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVL  527 (538)
Q Consensus       451 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (538)
                                 ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ...+.  ...+.+......+.|+
T Consensus       341 -----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~~~~--~~~~~~~~~~~~lpv~  403 (404)
T 2xbk_A          341 -----------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELP--VEQLR--LKEGQLSGGFAELRVV  403 (404)
T ss_dssp             -----------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GGGCC--BCSSBTTCCBSCCEEE
T ss_pred             -----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCC--CCcce--eccCcccCCcceeeee
Confidence                       2479999999999999999999999999999999 7998764  11122  2334444555666665


No 56 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=6.1e-57  Score=442.42  Aligned_cols=376  Identities=11%  Similarity=0.147  Sum_probs=296.6

Q ss_pred             ccchHHHHHHHhhCCeeEEEcC-------CcceEEecCHHHHHHHHhhCCcccccCccc--c-cchhhccCCCceEeccC
Q 036916           64 AAHVTLGSIADKHGPIFMIKLG-------MHRALIVSNWEIAKECFTTNDKVFCNRIKA--L-APEILGYNYAMFGFSPY  133 (538)
Q Consensus        64 ~~~~~~~~~~~~yG~v~~i~~~-------~~~~v~v~dpe~~~~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~  133 (538)
                      +++..+.+|+ +||||++++++       +.++++|+||++++++|.++ ..|++++..  . ....++..+.+ ++..+
T Consensus        45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~d  121 (435)
T 2wm5_A           45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVLD  121 (435)
T ss_dssp             HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGCC
T ss_pred             ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccCC
Confidence            5677888885 69999999986       56899999999999999886 467776532  1 11111111122 35568


Q ss_pred             chhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccc
Q 036916          134 GPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLV  212 (538)
Q Consensus       134 g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~  212 (538)
                      |+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.     . ++. ++|+..++ ..+++++++.+ ||.++ 
T Consensus       122 g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~-~~~-~vd~~~~~~~~~~~~vi~~~-~G~~~-  191 (435)
T 2wm5_A          122 DPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIAN-----N-PDR-QADLVSELAGPLPLQIICDM-MGIPK-  191 (435)
T ss_dssp             TTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHH-----C-TTS-EEEHHHHTTTHHHHHHHHHH-HTCCG-
T ss_pred             cHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----C-CCC-cEehHHHHHHHHHHHHHHHH-cCCCH-
Confidence            999999999998 89999999999999999999999998764     2 234 79999866 78999999999 99987 


Q ss_pred             cCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 036916          213 RGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQ  292 (538)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  292 (538)
                      +          . ...+.+....++...        .|.+  .   ...++..+..+.+.+++.+.+++++++       
T Consensus       192 ~----------~-~~~~~~~~~~~~~~~--------~p~~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~-------  240 (435)
T 2wm5_A          192 A----------D-HQRIFHWTNVILGFG--------DPDL--A---TDFDEFMQVSADIGAYATALAEDRRVN-------  240 (435)
T ss_dssp             G----------G-HHHHHHHHHHHHHTT--------CTTS--C---CCHHHHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred             H----------H-HHHHHHHHHHHhccC--------Ccch--h---hhHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence            2          1 123444444333321        1321  1   123566777888889999999887652       


Q ss_pred             hhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC
Q 036916          293 VVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRER  371 (538)
Q Consensus       293 ~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  371 (538)
                         ...|+++.|++ ..+.    +... ++++..++..+++||+|||+.+++|++++|++||++|+++++|++       
T Consensus       241 ---~~~dll~~ll~-~~~~----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------  305 (435)
T 2wm5_A          241 ---HHDDLTSSLVE-AEVD----GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-------  305 (435)
T ss_dssp             ---CCSSHHHHHHH-CCBT----TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-------
T ss_pred             ---CCCCHHHHHHh-hhcc----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-------
Confidence               23689999997 3221    2223 788999999999999999999999999999999999999999987       


Q ss_pred             CCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCC
Q 036916          372 QVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTT  451 (538)
Q Consensus       372 ~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~  451 (538)
                                +|+++||+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+||||-  
T Consensus       306 ----------~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~--  372 (435)
T 2wm5_A          306 ----------GLAPTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNP--  372 (435)
T ss_dssp             ----------HHHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCCS--
T ss_pred             ----------hHHHHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCCC--
Confidence                      389999999999999999 5699999999999999999999999999999999999999999999941  


Q ss_pred             CCCccccCCCCccccCCC-CCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCCCCCCCCCccCccCccccccccceeee
Q 036916          452 HKDIDVRGQNFELIPFGS-GRRGCPGISFALQVLLLTLASLLHGFE-FATPGPGDTEPLDLSEGVGLTNLKATPLQVLL  528 (538)
Q Consensus       452 ~~~~~~~~~~~~~~~Fg~-G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (538)
                                ..++|||+ |+|.|+|++||++|++++++.||++|+ +++.++     ..+.  .+........+.|++
T Consensus       373 ----------~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~-----~~~~--~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          373 ----------NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEE-----PARL--LSQFIHGIKTLPVTW  434 (435)
T ss_dssp             ----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-----CEEC--CCSSBCCEEECEEEC
T ss_pred             ----------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCC-----cccc--ccccccCccceeEEe
Confidence                      24799999 999999999999999999999999997 998753     2221  222333446666665


No 57 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=9.4e-57  Score=438.36  Aligned_cols=375  Identities=16%  Similarity=0.211  Sum_probs=289.3

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCccccc-c---hhhcc-----CCCceEecc
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIKALA-P---EILGY-----NYAMFGFSP  132 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~-~---~~~~~-----~~~~~~~~~  132 (538)
                      .+++.++.+|. +||||+++++ |+.++++|+||+++++++.++  .|++++.... .   .....     .+.+.++..
T Consensus        22 ~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   98 (413)
T 2z36_A           22 FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGM   98 (413)
T ss_dssp             TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGC
T ss_pred             cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccccc
Confidence            57788999997 7899999997 788999999999999999874  4666542211 0   00011     122313566


Q ss_pred             CchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHH-HHHHHHHHHHHhcccc
Q 036916          133 YGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFN-ALTFNVATRMVVGKRL  211 (538)
Q Consensus       133 ~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~-~~~~~~i~~~~fG~~~  211 (538)
                      +|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+       .+++ ++|+...+. .+++++++. +||.+.
T Consensus        99 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~  168 (413)
T 2z36_A           99 DGAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLA-------TDQR-PVDLVQALSLPVPSLVICE-LLGVPY  168 (413)
T ss_dssp             CHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT-------CSCS-SEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred             CchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHH-------hcCC-CccHHHHHhhhhHHHHHHH-HhCCCH
Confidence            8999999999998 7899999999999999999999987742       1244 799987665 699999998 589876


Q ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 036916          212 VRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDD  291 (538)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  291 (538)
                                 +. ...+......++         ...         . .++..+..+.+.+++.+.+++++++      
T Consensus       169 -----------~~-~~~~~~~~~~~~---------~~~---------~-~~~~~~~~~~~~~~~~~~i~~r~~~------  211 (413)
T 2z36_A          169 -----------TD-HDFFQSRTTMMV---------SRT---------S-MEDRRRAFAELRAYIDDLITRKESE------  211 (413)
T ss_dssp             -----------GG-HHHHHHHHHHTT---------CSS---------C-HHHHHHHHHHHHHHHHHHHHHHHSS------
T ss_pred             -----------HH-HHHHHHHHHHHh---------ccc---------C-cHHHHHHHHHHHHHHHHHHHHHHhC------
Confidence                       11 112222221110         000         0 0455667778888888888877642      


Q ss_pred             chhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCC
Q 036916          292 QVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRER  371 (538)
Q Consensus       292 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  371 (538)
                          ...|+++.|++...++.    ...++++..++..+++||+|||+++++|++++|++||++|+++++|++       
T Consensus       212 ----~~~dll~~ll~~~~~~~----~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------  276 (413)
T 2z36_A          212 ----PGDDLFSRQIARQRQEG----TLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG-------  276 (413)
T ss_dssp             ----CCSSHHHHHHHHHHHHS----CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------
T ss_pred             ----CCCCHHHHHHHhhcCCC----CCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH-------
Confidence                23589999998422211    123788999999999999999999999999999999999999999964       


Q ss_pred             CCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCC
Q 036916          372 QVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTT  451 (538)
Q Consensus       372 ~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~  451 (538)
                                 |+++||+|+||++|+++..++|++++|++++|+.|||||.|.++.+++||||++|+||++|+||||.  
T Consensus       277 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~--  343 (413)
T 2z36_A          277 -----------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA--  343 (413)
T ss_dssp             -----------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC--
T ss_pred             -----------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC--
Confidence                       7999999999999999966799999999999999999999999999999999999999999999983  


Q ss_pred             CCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeec
Q 036916          452 HKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLT  529 (538)
Q Consensus       452 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  529 (538)
                                ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ...+.+  ..+........+.|++.
T Consensus       344 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~~~~~--~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          344 ----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP--MEDVPF--KGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             ----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC--GGGSCB--CTTSSSCCBSCCEEECC
T ss_pred             ----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC--ccccee--cccccccCcceeeEEee
Confidence                      2469999999999999999999999999999999 5898764  111223  22333333456666553


No 58 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=3.1e-57  Score=441.40  Aligned_cols=373  Identities=17%  Similarity=0.218  Sum_probs=293.0

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCccc--c-----cc--hhh-cc----CCCce
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKA--L-----AP--EIL-GY----NYAMF  128 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~--~-----~~--~~~-~~----~~~~~  128 (538)
                      .+++.++.++ ++||||+++++++.+.++|+||+++++++.++  .|++++..  .     ..  ..+ ..    .+.+ 
T Consensus        14 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   89 (404)
T 1z8o_A           14 VDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN-   89 (404)
T ss_dssp             SSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS-
T ss_pred             cCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc-
Confidence            5678899999 99999999999888999999999999999876  46665432  1     00  011 00    1222 


Q ss_pred             EeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHh
Q 036916          129 GFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVV  207 (538)
Q Consensus       129 ~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~f  207 (538)
                      ++..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.        . ++ ++|+...+ ..+++++++. +|
T Consensus        90 l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~--------~-~~-~~d~~~~~~~~~~~~vi~~-~~  157 (404)
T 1z8o_A           90 MGTSDPPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVG--------D-SG-VVDIVDRFAHPLPIKVICE-LL  157 (404)
T ss_dssp             GGGCCTTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSC--------S-SS-EEEHHHHTTTHHHHHHHHH-HT
T ss_pred             cccCCCcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhh--------h-cC-CcchHHHHhHHHHHHHHHH-Hh
Confidence            35668999999999998 899999999999999999998887653        1 44 79998765 6899999997 59


Q ss_pred             ccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 036916          208 GKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRI  287 (538)
Q Consensus       208 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  287 (538)
                      |.+..+.            ..+.+.+..++.    .    ..|        . .++..+..+.+.+++.+.+++++++  
T Consensus       158 G~~~~~~------------~~~~~~~~~~~~----~----~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~--  206 (404)
T 1z8o_A          158 GVDEKYR------------GEFGRWSSEILV----M----DPE--------R-AEQRGQAAREVVNFILDLVERRRTE--  206 (404)
T ss_dssp             TCCGGGT------------TTHHHHHHHHHC----C----CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             CCCHHHH------------HHHHHHHHHHhc----c----CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence            9877211            122232322221    0    001        1 3556677778888888888887652  


Q ss_pred             CCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 036916          288 SSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHI  367 (538)
Q Consensus       288 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  367 (538)
                              ...|+++.|++...+.   .....++++..++..+++||+|||+++++|++++|++||++|+++++|++   
T Consensus       207 --------~~~dll~~ll~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---  272 (404)
T 1z8o_A          207 --------PGDDLLSALIRVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS---  272 (404)
T ss_dssp             --------CCSSHHHHHHHCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---
T ss_pred             --------CCCCHHHHHHhhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---
Confidence                    2358999998720221   11123788999999999999999999999999999999999999999854   


Q ss_pred             cCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCc
Q 036916          368 GRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPER  447 (538)
Q Consensus       368 ~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R  447 (538)
                                     |+++||+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+|
T Consensus       273 ---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR  336 (404)
T 1z8o_A          273 ---------------ALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR  336 (404)
T ss_dssp             ---------------GHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTS
T ss_pred             ---------------hHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCC
Confidence                           79999999999999999 66999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCcccccccccee
Q 036916          448 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQV  526 (538)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (538)
                      |.            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ...+.+  ..+.+.....+++|
T Consensus       337 ~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~--~~~~~~~~~~~l~v  400 (404)
T 1z8o_A          337 DT------------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID--ADDVVW--RRSLLLRGIDHLPV  400 (404)
T ss_dssp             CC------------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GGGCCC--CCCSSSCCCSCCEE
T ss_pred             CC------------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCC--CCccee--ccccccCCcceeEE
Confidence            83            2479999999999999999999999999999999 5998754  111222  33445566678888


Q ss_pred             ee
Q 036916          527 LL  528 (538)
Q Consensus       527 ~~  528 (538)
                      ++
T Consensus       401 ~~  402 (404)
T 1z8o_A          401 RL  402 (404)
T ss_dssp             ET
T ss_pred             Ee
Confidence            76


No 59 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.2e-57  Score=444.04  Aligned_cols=349  Identities=17%  Similarity=0.244  Sum_probs=281.1

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHHh
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRK  142 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~  142 (538)
                      .+++.++.+|+++ |||++++.++ +.++|+||+++++++.+. ..|++++............ ..++..+|+.|+++|+
T Consensus        24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~~g~~h~~~R~   99 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQ-FIPLQQDGAEHKAFRT   99 (396)
T ss_dssp             TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHC-CTTTTCCHHHHHHHHH
T ss_pred             cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccc-cCccccCCcHHHHHHH
Confidence            5789999999999 9999998874 589999999999999765 5677665322222211111 2346778999999999


Q ss_pred             hhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCCCCCcc
Q 036916          143 IATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGTTNHQE  221 (538)
Q Consensus       143 ~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  221 (538)
                      +++ +.|+...++.+.+.+.++++++++.+.+.        +  .+|+...+ ..++.++++. +||.+.          
T Consensus       100 ~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--------~--~~d~~~~~~~~~~~~v~~~-~~G~~~----------  157 (396)
T 3oft_A          100 PVM-KGLASRFVVALEPKVQAVARKLMESLRPR--------G--SCDFVSDFAEILPLNIFLT-LIDVPL----------  157 (396)
T ss_dssp             HHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGGG--------S--EEEHHHHTTTTHHHHHHHH-HTTCCG----------
T ss_pred             Hhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhhc--------C--CccHHHHHHHHHHHHHHHH-HcCCCH----------
Confidence            998 89999999999999999999999887532        3  58887666 4566666665 688765          


Q ss_pred             chHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHH
Q 036916          222 IDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFM  301 (538)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l  301 (538)
                        +....+.+....++...                   ..+...+..+.+.+++.+.++++++.          ...|++
T Consensus       158 --~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d~l  206 (396)
T 3oft_A          158 --EDRPRLRQLGVQLTRPD-------------------GSMTVEQLKQAADDYLWPFIEKRMAQ----------PGDDLF  206 (396)
T ss_dssp             --GGHHHHHHHHHHHHSCC-------------------SSCCHHHHHHHHHHHHHHHHHHHHHS----------CCSSHH
T ss_pred             --HHHHHHHHHHHHHhCCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHH
Confidence              12233333333322100                   01335567778888899999887763          346899


Q ss_pred             HHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhccc
Q 036916          302 DVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNL  381 (538)
Q Consensus       302 ~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~l  381 (538)
                      +.|++ ..++   .....++++..++..+++||+|||+++++|++++|++||++|+++++|++                 
T Consensus       207 ~~ll~-~~~~---~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------  265 (396)
T 3oft_A          207 SRILS-EPVG---GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-----------------  265 (396)
T ss_dssp             HHHHT-SCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------
T ss_pred             HHHHH-hhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------
Confidence            99997 3221   11123788999999999999999999999999999999999999999976                 


Q ss_pred             HHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCC
Q 036916          382 VYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQN  461 (538)
Q Consensus       382 p~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~  461 (538)
                       |+++||+|+||++|++  .++|++++|++++|+.||||+.|.++.+++||||++|+||++|+|+||++          +
T Consensus       266 -~l~a~i~E~lRl~p~~--~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~----------~  332 (396)
T 3oft_A          266 -LIPAAADELMRRYPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA----------P  332 (396)
T ss_dssp             -GHHHHHHHHHHHCCCB--EEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC----------G
T ss_pred             -hHHHHHHHHHHhcCcc--cCceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC----------C
Confidence             7999999999999999  45899999999999999999999999999999999999999999999963          3


Q ss_pred             CccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          462 FELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       462 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                      ..++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus       333 ~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~  374 (396)
T 3oft_A          333 IRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPD  374 (396)
T ss_dssp             GGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSS
T ss_pred             CCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence            4689999999999999999999999999999999 9999864


No 60 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=4.6e-58  Score=451.19  Aligned_cols=386  Identities=16%  Similarity=0.203  Sum_probs=286.1

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHHh
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRK  142 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~  142 (538)
                      .+++.+++++ ++||||+++..++  .++|++|+++++++.++.. |++++.........  +.+.++..+|+.|+++|+
T Consensus        53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~--~~~~l~~~dg~~h~~~Rr  126 (441)
T 3nc3_A           53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVM--RGPVLAQMHGKEHSAKRR  126 (441)
T ss_dssp             HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSC--C-------------CCHH
T ss_pred             cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-cccccccccccccc--CCCccccCCcHHHHHHHH
Confidence            4567778776 6899999987655  8999999999999988744 76655432221111  122356778999999999


Q ss_pred             hhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHH-HHHHHHHHHHHHHHHhccccccCCCCCCcc
Q 036916          143 IATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMK-EIFNALTFNVATRMVVGKRLVRGGTTNHQE  221 (538)
Q Consensus       143 ~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  221 (538)
                      +++ +.|+...++.+.+.+.++++++++.+.+         ++ .+|+. ++...+++++++. +||.+.          
T Consensus       127 ~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~-~~dl~~~~~~~~~~~vi~~-l~G~~~----------  184 (441)
T 3nc3_A          127 IVV-RSFIGDALDHLSPLIKQNAENLLAPYLE---------RG-KSDLVNDFGKTFAVCVTMD-MLGLDK----------  184 (441)
T ss_dssp             HHH-HHHHHTHHHHHHHHHHHHHHHHHTTTTT---------TT-EEECCCCCHHHHHHHHHHH-HTTCCG----------
T ss_pred             HHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---------cC-CCcHHHHHHHHHHHHHHHH-HcCCCH----------
Confidence            998 8999999999999999999998876642         23 68875 4455689999998 589876          


Q ss_pred             chHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHH
Q 036916          222 IDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFM  301 (538)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l  301 (538)
                       + ....+.+....+.........    +       ....+...+..+.+.+++.+.++++++          +...|++
T Consensus       185 -~-~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~----------~~~~Dll  241 (441)
T 3nc3_A          185 -R-DHEKISEWHSGVADFITSISQ----S-------PEARAHSLWCSEQLSQYLMPVIKERRV----------NPGSDLI  241 (441)
T ss_dssp             -G-GHHHHHHHHHHHHHHHHCSCC----C-------HHHHHHHHHHHHHHHHHHHHHHHHHTT----------SCCSSHH
T ss_pred             -H-HHHHHHHHHHHHHHhcccccC----C-------hHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCCCHH
Confidence             1 123344444444443221100    0       111345566777888888888887764          2345899


Q ss_pred             HHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhccc
Q 036916          302 DVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNL  381 (538)
Q Consensus       302 ~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~l  381 (538)
                      +.|++...++    ....++++.+++..+++||+|||+++++|++++|++||++|+++++|+                  
T Consensus       242 ~~Ll~~~~~~----~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------  299 (441)
T 3nc3_A          242 SILCTSEYEG----MALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------  299 (441)
T ss_dssp             HHHCC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------
T ss_pred             HHHHHhhccC----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------
Confidence            9998732211    112388899999999999999999999999999999999999999985                  


Q ss_pred             HHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCC
Q 036916          382 VYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQN  461 (538)
Q Consensus       382 p~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~  461 (538)
                      +|+++||+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||+....  .....+
T Consensus       300 ~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~--~~~~~~  376 (441)
T 3nc3_A          300 SLVPRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIK--SAFSGA  376 (441)
T ss_dssp             GGHHHHHHHHHHHSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGG--GTTSSS
T ss_pred             HHHHHHHHHhhhcCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccc--cccCCC
Confidence            4899999999999999997 5899999999999999999999999999999999999999999999976532  111225


Q ss_pred             CccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeecc
Q 036916          462 FELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTP  530 (538)
Q Consensus       462 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (538)
                      ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  .  ..+  ..+.+......+.|++++
T Consensus       377 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~--~~~--~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          377 ARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEED--F--CYA--ESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             CSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTT--C--CCC--EECSSBCEESCCEEECC-
T ss_pred             CCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC--C--ccc--ccCccccCcceeEEEEec
Confidence            6899999999999999999999999999999999 9999764  1  122  233445556788888753


No 61 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=2.6e-57  Score=447.38  Aligned_cols=384  Identities=16%  Similarity=0.200  Sum_probs=293.0

Q ss_pred             cchHHHHHHHhhCCee--EEE-cCCcceEEecCHHHHHHHHhhCCcccccCcccccchhh-----------cc-CCCceE
Q 036916           65 AHVTLGSIADKHGPIF--MIK-LGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEIL-----------GY-NYAMFG  129 (538)
Q Consensus        65 ~~~~~~~~~~~yG~v~--~i~-~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~  129 (538)
                      ++..++++ ++||||+  +++ +++.++++|++++++++++++. ..|++++........           +. .....+
T Consensus        47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l  124 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL  124 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred             chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence            67788888 6799999  888 6778999999999999999776 667776643321111           00 011235


Q ss_pred             eccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhc
Q 036916          130 FSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVG  208 (538)
Q Consensus       130 ~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG  208 (538)
                      +..+|+.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        ++ ++|+...+ ..+++++|+.+ ||
T Consensus       125 ~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--------~~-~~dl~~~~~~~~~~~vi~~l-~G  193 (450)
T 3tkt_A          125 VQMDAPKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLGA--------GE-EGDFMALVAAPYPLHVVMQI-LG  193 (450)
T ss_dssp             GGCCTTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHHT--------CS-EEEHHHHTTTHHHHHHHHHH-TT
T ss_pred             ccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CEeeHHHHHHHHHHHHHHHH-cC
Confidence            6778999999999998 89999999999999999999999988652        44 79998888 69999999985 89


Q ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 036916          209 KRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLD-LDGIEKSMKRTAKELDQILEGWLEEHKQKRI  287 (538)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  287 (538)
                      .+.           + ....+.+....++...    .....++..++. .....+...+..+.+.+++.+++++++++  
T Consensus       194 ~~~-----------~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--  255 (450)
T 3tkt_A          194 VPP-----------E-DEPKMLFLTQQMFGGQ----DEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN--  255 (450)
T ss_dssp             CCG-----------G-GHHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             CCh-----------h-HHHHHHHHHHHHhccc----cchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence            765           1 1223333333222111    111122222221 11234566777888888999999887652  


Q ss_pred             CCCcchhcccccHHHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHh
Q 036916          288 SSDDQVVKEENDFMDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTH  366 (538)
Q Consensus       288 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~  366 (538)
                              ..+|+++.|++ ..+.    +... ++++..++..+++||+|||+++++|++++|++||++|+++++|++  
T Consensus       256 --------~~~dll~~ll~-~~~~----~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--  320 (450)
T 3tkt_A          256 --------PTDDVATVIAN-AVVD----GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN--  320 (450)
T ss_dssp             --------CCSSHHHHHHT-CEET----TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--
T ss_pred             --------CCCCHHHHHHh-cccc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH--
Confidence                    34589999987 3221    1123 788999999999999999999999999999999999999999964  


Q ss_pred             hcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCC
Q 036916          367 IGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPE  446 (538)
Q Consensus       367 ~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~  446 (538)
                                      |+++||+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+
T Consensus       321 ----------------~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~Pe  383 (450)
T 3tkt_A          321 ----------------LLPGIVEEAIRWTTPVQ-HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPT  383 (450)
T ss_dssp             ----------------GHHHHHHHHHHHHCSBC-EEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTT
T ss_pred             ----------------HHHHHHHHHHHhCCCcc-CcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCC
Confidence                            79999999999999999 5699999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCCCCCCCCCccCccCccccccccce
Q 036916          447 RFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATPGPGDTEPLDLSEGVGLTNLKATPLQ  525 (538)
Q Consensus       447 R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  525 (538)
                      ||.            ..++|||+|+|.|+|++||++|++++++.||++|+ +++.++     ..+.  .+........+.
T Consensus       384 R~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~~--~~~~~~g~~~lp  444 (450)
T 3tkt_A          384 RPA------------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGE-----PKRV--NSTFVGGFKSLP  444 (450)
T ss_dssp             SCT------------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSC-----CEEC--CCSSBCCEEECE
T ss_pred             CCC------------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCC-----cccc--cCcccCCcccce
Confidence            952            24799999999999999999999999999999998 777643     1221  122223345677


Q ss_pred             eeecc
Q 036916          526 VLLTP  530 (538)
Q Consensus       526 ~~~~~  530 (538)
                      |++++
T Consensus       445 v~~~~  449 (450)
T 3tkt_A          445 MRWKA  449 (450)
T ss_dssp             EEEEE
T ss_pred             EEEec
Confidence            77653


No 62 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=3.4e-57  Score=443.67  Aligned_cols=378  Identities=15%  Similarity=0.166  Sum_probs=293.5

Q ss_pred             CccchHHHHHHHhhC-CeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHH
Q 036916           63 PAAHVTLGSIADKHG-PIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIR  141 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG-~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R  141 (538)
                      .+++.++.++++++| ||+++..++ +.++|+||+.+++++++. ..|++++...........+ ..++..+|+.|+++|
T Consensus        38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~dg~~h~~~R  114 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYD-MVPTKLDPPEHTPYR  114 (421)
T ss_dssp             GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCC-CTTTTCCTTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccc-cCCccCCcHHHHHHH
Confidence            467889999987766 899998765 589999999999999554 5677665332222111111 234677899999999


Q ss_pred             hhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCCCCCc
Q 036916          142 KIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGTTNHQ  220 (538)
Q Consensus       142 ~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  220 (538)
                      ++++ +.|+...++.+.+.+.++++++++.+.+         ++ .+|+...+ ..++.++++. +||.+.         
T Consensus       115 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---------~~-~~d~~~~~~~~~~~~v~~~-~~G~~~---------  173 (421)
T 3lxh_A          115 KAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD---------RG-HCEFGSEFSTVFPVRVFLA-LAGLPV---------  173 (421)
T ss_dssp             HHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT---------TS-EEEHHHHTTTTHHHHHHHH-HHTCCG---------
T ss_pred             HHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh---------cC-CeehHHHHHHHHHHHHHHH-HcCCCH---------
Confidence            9998 8999999999999999999998877642         23 68876655 5577777765 588776         


Q ss_pred             cchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccH
Q 036916          221 EIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDF  300 (538)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~  300 (538)
                         +....+.+....++...      ..+|.       ...+...+..+.+.+++.+.++++++.          ...|+
T Consensus       174 ---~~~~~~~~~~~~~~~~~------~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dl  227 (421)
T 3lxh_A          174 ---EDATKLGLLANEMTRPS------GNTPE-------EQGRSLEAANKGFFEYVAPIIAARRGG----------SGTDL  227 (421)
T ss_dssp             ---GGHHHHHHHHHHHHSCC------CSSHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTC----------CCCSH
T ss_pred             ---HHHHHHHHHHHHHhccc------cCCCc-------hhHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCH
Confidence               12233444443333211      11111       124566777888888999888877652          34689


Q ss_pred             HHHHHHHHhcccCCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhc
Q 036916          301 MDVMLSALADAEELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIK  379 (538)
Q Consensus       301 l~~ll~~~~~~~~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~  379 (538)
                      ++.|++ ..++    +... ++++..++..+++||+|||+++++|++++|++||++|+++++|++               
T Consensus       228 l~~ll~-~~~~----~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------  287 (421)
T 3lxh_A          228 ITRILN-VEID----GKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL---------------  287 (421)
T ss_dssp             HHHHHT-SCBT----TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH---------------
T ss_pred             HHHHHh-hhcc----CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------
Confidence            999997 2221    2223 888999999999999999999999999999999999999999987               


Q ss_pred             ccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccC
Q 036916          380 NLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRG  459 (538)
Q Consensus       380 ~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~  459 (538)
                         |+++||+|+||++|++  .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||           
T Consensus       288 ---~l~a~i~E~lRl~p~~--~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~-----------  351 (421)
T 3lxh_A          288 ---KLQRGVEELFRRFAVV--SDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR-----------  351 (421)
T ss_dssp             ---HHHHHHHHHHHHCCCB--EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS-----------
T ss_pred             ---HHHHHHHHHHHhcCcc--CCceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC-----------
Confidence               7999999999999999  458999999999999999999999999999999999999999999995           


Q ss_pred             CCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccCCC
Q 036916          460 QNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRLH  533 (538)
Q Consensus       460 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  533 (538)
                       +..++|||+|+|.|+|++||++|++++++.||++| ++++.++  .+ ..+  ..+.+ .....+.|++++|..
T Consensus       352 -~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~--~~-~~~--~~~~~-~~~~~lpv~~~p~~~  419 (421)
T 3lxh_A          352 -DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDR--AV-PIY--HSGIV-AAVENIPLEWEPQRV  419 (421)
T ss_dssp             -CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTT--CC-CEE--ECSSB-CEEECCEEECCCC--
T ss_pred             -CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCC--CC-cee--ccccc-cCceeeeEEEecccc
Confidence             34689999999999999999999999999999999 9999764  11 222  22333 334679999998853


No 63 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=3.2e-56  Score=432.01  Aligned_cols=345  Identities=15%  Similarity=0.187  Sum_probs=283.7

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCC----cceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGM----HRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWR  138 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~----~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~  138 (538)
                      .+++..+.++ ++||||+++++++    .++++|+||+++++++++. ..|++++......... ...+.++..+|+.|+
T Consensus        12 ~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~~   88 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRA-LLPGILQAYDPPDHT   88 (384)
T ss_dssp             TEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----C-CCTTCGGGCCTTHHH
T ss_pred             cChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCcccccccccc-ccccccccCCChhHH
Confidence            6789999999 5999999999876    7999999999999999554 6777766533221111 122345677899999


Q ss_pred             HHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHHHHHHHHHhccccccCCCCC
Q 036916          139 QIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTFNVATRMVVGKRLVRGGTTN  218 (538)
Q Consensus       139 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~  218 (538)
                      ++|++++ +.|+..+++.+.+.+.++++.+++.+.+.        ++ ++|+.+++...+.+.+...+||.+.       
T Consensus        89 ~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~~~~~~~~v~~~~~G~~~-------  151 (384)
T 3oo3_A           89 RLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFESV--------GA-PVDFVRHAAWPIPAYIACEFLGVPR-------  151 (384)
T ss_dssp             HHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHS--------CS-SEEHHHHTTTHHHHHHHHHHHTCCG-------
T ss_pred             HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHHHHHHHHHHcCCCH-------
Confidence            9999998 89999999999999999999999988642        44 7999999999888888888999887       


Q ss_pred             CccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccc
Q 036916          219 HQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEEN  298 (538)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  298 (538)
                          +. ...+.+.+..++.                   ....+...+..+.+.+++.+.++++++          +...
T Consensus       152 ----~~-~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~~~  197 (384)
T 3oo3_A          152 ----DD-QAELSRMIRESRE-------------------SRLPRQRTLSGLGIVNYTKRLTSGKRR----------DPGD  197 (384)
T ss_dssp             ----GG-HHHHHHHHHHHHH-------------------CSCHHHHHHHHHHHHHHHHHHHHHHHH----------SCCS
T ss_pred             ----HH-HHHHHHHHHHHhc-------------------cCChHHHHHHHHHHHHHHHHHHHHHHh----------CCCC
Confidence                11 1234444443332                   012355667778888899998887765          2346


Q ss_pred             cHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhh
Q 036916          299 DFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDI  378 (538)
Q Consensus       299 d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  378 (538)
                      |+++.|++. ...     ...++++..++..+++||+|||+++++|++++|++||++|+++++|++.             
T Consensus       198 d~l~~ll~~-~~~-----~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-------------  258 (384)
T 3oo3_A          198 GMIGVIVRE-HGA-----EISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-------------  258 (384)
T ss_dssp             SHHHHHHHH-HGG-----GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-------------
T ss_pred             CHHHHHHHh-cCC-----CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-------------
Confidence            999999984 211     1237889999999999999999999999999999999999999999874             


Q ss_pred             cccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCcccc
Q 036916          379 KNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVR  458 (538)
Q Consensus       379 ~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~  458 (538)
                           +++||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++||     +||++|+|+||          
T Consensus       259 -----l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~----------  318 (384)
T 3oo3_A          259 -----IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE----------  318 (384)
T ss_dssp             -----HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS----------
T ss_pred             -----HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC----------
Confidence                 8999999999999998777999999999999999999999999999999     99999999996          


Q ss_pred             CCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          459 GQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       459 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                        +..++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus       319 --~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  361 (384)
T 3oo3_A          319 --KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVP  361 (384)
T ss_dssp             --CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             --CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCC
Confidence              24579999999999999999999999999999999 9999865


No 64 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=5e-57  Score=442.87  Aligned_cols=380  Identities=18%  Similarity=0.246  Sum_probs=292.7

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc-hhhc------cCCCceEeccCch
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP-EILG------YNYAMFGFSPYGP  135 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~g~  135 (538)
                      .+++.+++++ ++||||++++.|   .++|+||+++++++++. ..+++++..... ...+      ......++..+|+
T Consensus        29 ~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  103 (418)
T 3r9b_A           29 ADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDPP  103 (418)
T ss_dssp             TCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCCTT
T ss_pred             cCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcCCc
Confidence            6788889888 578999998765   89999999999999775 344454432211 1111      0111234667899


Q ss_pred             hHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccC
Q 036916          136 YWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRG  214 (538)
Q Consensus       136 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~  214 (538)
                      .|+++|++++ +.|+...++.+.+.+.++++++++ +.        + ++ .+|+...+ ..+++++++. +||.+. + 
T Consensus       104 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~--------~-~~-~~d~~~~~~~~~~~~vi~~-~~G~~~-~-  168 (418)
T 3r9b_A          104 DHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AV--------D-GP-EFNLIDNLAYPLPVAVICR-LLGVPI-E-  168 (418)
T ss_dssp             HHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TC--------C-SS-EEEHHHHTTTHHHHHHHHH-HHTCCG-G-
T ss_pred             hHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hh--------c-cC-CeehHHHHhCcCCHHHHHH-HcCCCH-H-
Confidence            9999999998 899999999999999999999987 53        2 23 68976555 6899999999 899887 1 


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchh
Q 036916          215 GTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVV  294 (538)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  294 (538)
                               . ...+.+....+......      .+.+.+++ ....+...+..+.+.+++.+.+++++++         
T Consensus       169 ---------~-~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~---------  222 (418)
T 3r9b_A          169 ---------D-EPKFSRASALLAAALDP------FLALTGET-SDLFDEQMKAGMWLRDYLRALIDERRRT---------  222 (418)
T ss_dssp             ---------G-HHHHHHHHHHHHHTTSC------HHHHHSSC-CTTHHHHHHHHHHHHHHHHHHHHHTTTS---------
T ss_pred             ---------H-HHHHHHHHHHHHhhcCc------cccccccC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence                     1 12333333333322211      11111111 2234667778888888888888876542         


Q ss_pred             cccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 036916          295 KEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVI  374 (538)
Q Consensus       295 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  374 (538)
                       ...|+++.|++...+..    ...++++..++..+++||+|||+++++|++++|++||++|+++++|++          
T Consensus       223 -~~~d~l~~ll~~~~~~~----~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------  287 (418)
T 3r9b_A          223 -PGEDLMSGLVAVEESGD----QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS----------  287 (418)
T ss_dssp             -CCSSHHHHHHHHHHHSS----SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG----------
T ss_pred             -CCccHHHHHHHhhhccC----CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH----------
Confidence             34689999998422221    123888999999999999999999999999999999999999999976          


Q ss_pred             hhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCC
Q 036916          375 ESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKD  454 (538)
Q Consensus       375 ~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~  454 (538)
                              |+++||+|+||++|+++.. .|++++|++++|+.||||+.|.++.+++||||++|+||++|+|+|+      
T Consensus       288 --------~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~------  352 (418)
T 3r9b_A          288 --------RASAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA------  352 (418)
T ss_dssp             --------GHHHHHHHHHHHSCSBCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS------
T ss_pred             --------hHHHHHHHHHHhCCccccc-eeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC------
Confidence                    7999999999999999985 7999999999999999999999999999999999999999999992      


Q ss_pred             ccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccC
Q 036916          455 IDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       455 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  531 (538)
                            ...++|||+|+|.|+|++||++|++++++.||++| ++++.++     +.+  ..+.+......+.|++++|
T Consensus       353 ------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~--~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          353 ------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE-----PEY--KRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             ------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-----CEE--CSCSSBCCEEECEEEC---
T ss_pred             ------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC-----Ccc--ccCCcccCcceeEEEecCC
Confidence                  23579999999999999999999999999999999 8998754     222  3344566678899999876


No 65 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=3e-57  Score=441.44  Aligned_cols=372  Identities=16%  Similarity=0.201  Sum_probs=290.3

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCC--cceEEecCHHHHHHHHhhCCcccccCcccccchhhcc--CC-CceEeccCchhH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGM--HRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGY--NY-AMFGFSPYGPYW  137 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~--~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~g~~w  137 (538)
                      .+++..++++.+ ||||+++...+  .+.++|++++++++++++. ..|++++..........  .. ...++..+|+.|
T Consensus        37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  114 (415)
T 3mgx_A           37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH  114 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred             CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence            467888998887 99999997444  7899999999999999655 45776654322211110  01 223577889999


Q ss_pred             HHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCC
Q 036916          138 RQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGT  216 (538)
Q Consensus       138 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~  216 (538)
                      +++|++++ +.|+...++.+.+.+.++++++++.+.+         ++ .+|+..++ ..+++++|+. +||.+.     
T Consensus       115 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---------~~-~~dl~~~~~~~~~~~vi~~-l~G~~~-----  177 (415)
T 3mgx_A          115 RKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD---------GE-VCDAATAIGPRIPAAVVCE-ILGVPA-----  177 (415)
T ss_dssp             HHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS---------SS-CEESTTTTTTHHHHHHHHH-HHTCCG-----
T ss_pred             HHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---------cC-CcchHHHHHHHHHHHHHHH-HcCCCH-----
Confidence            99999998 8999999999999999999988876532         23 68999887 6799999998 588765     


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcc
Q 036916          217 TNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKE  296 (538)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  296 (538)
                            + ....+.+....+....        .|..  .+     ....+..+.+.+++.+.+++++++          .
T Consensus       178 ------~-~~~~~~~~~~~~~~~~--------~~~~--~~-----~~~~~~~~~l~~~~~~~i~~rr~~----------~  225 (415)
T 3mgx_A          178 ------E-DEDMLIDLTNHAFGGE--------DELF--DG-----MTPRQAHTEILVYFDELITARRKE----------P  225 (415)
T ss_dssp             ------G-GHHHHHHHHHHHTSCC--------C------C-----CCHHHHHHHHHHHHHHHHHHHHHS----------C
T ss_pred             ------H-HHHHHHHHHHHHHccc--------Cccc--ch-----HHHHHHHHHHHHHHHHHHHHHHhC----------C
Confidence                  1 2233443333332210        1110  00     012256677888888888887652          3


Q ss_pred             cccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChh
Q 036916          297 ENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIES  376 (538)
Q Consensus       297 ~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  376 (538)
                      ..|+++.|++ ..       ...++++..++..+++||+|||+++++|++++|++||++|+++++|+             
T Consensus       226 ~~dll~~ll~-~~-------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-------------  284 (415)
T 3mgx_A          226 GDDLVSTLVT-DD-------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-------------  284 (415)
T ss_dssp             CSSHHHHHHH-CT-------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-------------
T ss_pred             CCCHHHHHHh-CC-------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-------------
Confidence            4589999987 21       12378899999999999999999999999999999999999999986             


Q ss_pred             hhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCcc
Q 036916          377 DIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDID  456 (538)
Q Consensus       377 ~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~  456 (538)
                           ||+++||+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||.       
T Consensus       285 -----~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~-------  351 (415)
T 3mgx_A          285 -----ADVDTVVEEVLRWTSPAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP-------  351 (415)
T ss_dssp             -----SCHHHHHHHHHHHHCCBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS-------
T ss_pred             -----HhHHHHHHHHHHhcCcccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC-------
Confidence                 5999999999999999985 599999999999999999999999999999999999999999999973       


Q ss_pred             ccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeeccC
Q 036916          457 VRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPR  531 (538)
Q Consensus       457 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  531 (538)
                           ..++|||+|+|.|+|++||++|++++++.||++| ++++.++     +...  .+........+.|++++|
T Consensus       352 -----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~~--~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          352 -----NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLERE-----PAWL--RAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             -----CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-----CEEC--SCSSBCCEEECEEEEEEC
T ss_pred             -----CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCC-----cccc--cCCcccCceeeeEEEecC
Confidence                 2479999999999999999999999999999999 8998754     1221  222334457888888876


No 66 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=8.1e-57  Score=437.58  Aligned_cols=344  Identities=15%  Similarity=0.225  Sum_probs=272.9

Q ss_pred             HHHHHHHhhCCeeEEEcC-Cc---ceEEecCHHHHHHHH-hhCCcccccCccc------c-cchhhc-cCCCceEeccCc
Q 036916           68 TLGSIADKHGPIFMIKLG-MH---RALIVSNWEIAKECF-TTNDKVFCNRIKA------L-APEILG-YNYAMFGFSPYG  134 (538)
Q Consensus        68 ~~~~~~~~yG~v~~i~~~-~~---~~v~v~dpe~~~~il-~~~~~~~~~~~~~------~-~~~~~~-~~~~~~~~~~~g  134 (538)
                      .+.+|+++ |||++++++ +.   ++|+|+||+++++++ .++  .|+.++..      . ...... ..+.+ ++..+|
T Consensus        18 ~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g   93 (398)
T 1lfk_A           18 PADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ--QFSTRRRWDPRDEIGGKGIFRPRELVGN-LMDYDP   93 (398)
T ss_dssp             ECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT--TEEECTTCCC-------------CCTTC-GGGCCT
T ss_pred             hhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc--ccccccccccccccCCcccccccccccC-ccccCC
Confidence            34457776 999999875 44   799999999999999 543  46655431      0 110100 11222 355689


Q ss_pred             hhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH-HHHHHHHHHHhcccccc
Q 036916          135 PYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA-LTFNVATRMVVGKRLVR  213 (538)
Q Consensus       135 ~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~  213 (538)
                      +.|+++|++++ +.|+...++.+.+.+.++++++++.+.+.        ++ ++|+.+++.. +++++++. +||.++  
T Consensus        94 ~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~--  160 (398)
T 1lfk_A           94 PEHTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMERA--------GS-PADLIAFVADKVPGAVLCE-LVGVPR--  160 (398)
T ss_dssp             THHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHH--------CS-SEEHHHHTTTTHHHHHHHH-HHTCCG--
T ss_pred             HHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHHHHHHHHH-HcCCCH--
Confidence            99999999998 78999999999999999999999988643        44 7999999987 88999987 689887  


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcch
Q 036916          214 GGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQV  293 (538)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (538)
                               ++ ...+.+....++.         .         ....++..+..+.+.+++.+.++++++.        
T Consensus       161 ---------~~-~~~~~~~~~~~~~---------~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------  204 (398)
T 1lfk_A          161 ---------DD-RDMFMKLCHGHLD---------A---------SLSQKRRAALGDKFSRYLLAMIARERKE--------  204 (398)
T ss_dssp             ---------GG-HHHHHHHHHHTTC---------T---------TSCHHHHHHHHHHHHHHHHHHHHHHHHS--------
T ss_pred             ---------HH-HHHHHHHHHHHHh---------c---------ccchHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence                     21 1223222221110         0         0123556677788888999998887652        


Q ss_pred             hcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCC
Q 036916          294 VKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQV  373 (538)
Q Consensus       294 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  373 (538)
                        ...|+++.|++.. +.     ...++++..++..+++||+|||+++++|++++|++||++|+++++|++         
T Consensus       205 --~~~dll~~ll~~~-~~-----~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------  267 (398)
T 1lfk_A          205 --PGEGMIGAVVAEY-GD-----DATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------  267 (398)
T ss_dssp             --CCSSHHHHHHHHH-GG-----GSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH---------
T ss_pred             --CCCCHHHHHHHhc-CC-----CCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------
Confidence              2358999999833 11     123788999999999999999999999999999999999999999975         


Q ss_pred             ChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCC
Q 036916          374 IESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHK  453 (538)
Q Consensus       374 ~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~  453 (538)
                               |+++||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.    
T Consensus       268 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----  334 (398)
T 1lfk_A          268 ---------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----  334 (398)
T ss_dssp             ---------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----
T ss_pred             ---------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----
Confidence                     7999999999999999966799999999999999999999999999999999999999999999983    


Q ss_pred             CccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          454 DIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       454 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                              ..++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus       335 --------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  376 (398)
T 1lfk_A          335 --------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADP  376 (398)
T ss_dssp             --------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESST
T ss_pred             --------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCC
Confidence                    2479999999999999999999999999999999 8998753


No 67 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=3.4e-57  Score=452.76  Aligned_cols=418  Identities=13%  Similarity=0.137  Sum_probs=287.6

Q ss_pred             CCCCCCCCCCcCccccccccccCC--CC-ccchHHHHHHHhhCC-eeEEEcCCc-------ceEEecCHHHHHHHHhhC-
Q 036916           38 DKKTVPEPGGAWPLIGHLHLLGGQ--KP-AAHVTLGSIADKHGP-IFMIKLGMH-------RALIVSNWEIAKECFTTN-  105 (538)
Q Consensus        38 ~~~~~ppgp~~~p~~G~~~~~~~~--~~-~~~~~~~~~~~~yG~-v~~i~~~~~-------~~v~v~dpe~~~~il~~~-  105 (538)
                      .+.+.||||.++|++|++..+...  .. +++.++.+++++||+ ||++++++.       ..|++.|.+..+.++... 
T Consensus         6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~   85 (473)
T 3dan_A            6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK   85 (473)
T ss_dssp             SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence            355678999999999999886311  14 678899999999999 999998643       344555655554554311 


Q ss_pred             ---CcccccCcccccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccC
Q 036916          106 ---DKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGD  182 (538)
Q Consensus       106 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~  182 (538)
                         ...+...... ....++......++..+|+.|+++|+++. +.|+.. +..+.+.+.++++++++.+.+.     ..
T Consensus        86 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~~-~~~~~~~i~~~~~~ll~~~~~~-----~~  157 (473)
T 3dan_A           86 VEKKDLFTGTYMP-STKLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKNS-SNRVIPQFETTYTELFEGLEAE-----LA  157 (473)
T ss_dssp             EECSSCTTSSSCC-CGGGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHH-----HH
T ss_pred             eeccccccccccC-CccccCCCcceeeeCCCcHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHH-----hc
Confidence               1112111111 11223322223346678999999999998 788884 8999999999999999988753     22


Q ss_pred             CCCccccHHHHHHHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhccccccccccccc-ccccccch
Q 036916          183 SGKALVEMKEIFNALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLR-WLDLDGIE  261 (538)
Q Consensus       183 ~g~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~~~~~~~~  261 (538)
                      +++ ++|+.+++..+++++++.++||.++....      ..+....+   .......       ...|.+. .++     
T Consensus       158 ~~~-~vdl~~~~~~~~~~~i~~~~~G~~~~~~~------~~~~~~~~---~~~~~~~-------~~~p~~~~~lp-----  215 (473)
T 3dan_A          158 KNG-KAAFNDVGEQAAFRFLGRAYFNSNPEETK------LGTSAPTL---ISSWVLF-------NLAPTLDLGLP-----  215 (473)
T ss_dssp             HHS-CEECHHHHHHHHHHHHHHHHHSCCGGGST------TTTCHHHH---HHHHHHH-------HHGGGCCCSCC-----
T ss_pred             cCC-cccHHHHHHHHHHHHHHHHHcCCCCCchh------hhhhHHHH---HHHHHHH-------hccchhhhcch-----
Confidence            233 79999999999999999999999883210      01111112   1111110       1112211 111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc----cCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHH-Hhccc
Q 036916          262 KSMKRTAKELDQILEGWLEEHKQKR----ISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALI-LGGTD  336 (538)
Q Consensus       262 ~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~-~Ag~~  336 (538)
                                 .++...+.+++...    ....+...+.-.|+++.+++...+.    + ..++++..+++.++ +||++
T Consensus       216 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~-l~~~ei~~~~l~~~g~~~~~  279 (473)
T 3dan_A          216 -----------WFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAEKL----G-VPKDEAVHNILFAVCFNTFG  279 (473)
T ss_dssp             -----------HHHHHHHHSSSCCCGGGTHHHHHHHHHHHHHHCHHHHHHHHHH----T-CCHHHHHHHHHHHHHTHHHH
T ss_pred             -----------HHHHHHHhhhccchHhhhhhchhhhHHHHHHHHHHHHHhHhhc----C-CCHHHHHHHHHHHHHHhccc
Confidence                       01111111110000    0000000001124455566522221    1 22667777766666 88888


Q ss_pred             hhHHHHHHHHHHHHh-ChHHHHHHHHHHHHhhcC-C-CCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccc-
Q 036916          337 TTTFTLTWALTLTLN-HLDVLKKVQNELDTHIGR-E-RQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTI-  412 (538)
Q Consensus       337 tta~~l~~~l~~L~~-~P~~~~~l~~Ei~~~~~~-~-~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~-  412 (538)
                      ||+++++|++++|++ ||++|+++++|++.+++. + +.++.+++.+|||+++||+|+||++|+++.. .|.+++|+++ 
T Consensus       280 tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~  358 (473)
T 3dan_A          280 GVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQ-YGKAKSNFTIE  358 (473)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEEE
T ss_pred             cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccc-cccccCCcEee
Confidence            999999999999999 899999999999999765 3 6899999999999999999999999999987 4668999999 


Q ss_pred             ---cceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCcc-c--cCCCCccccCCCCCCCCCChHHHHHHHHH
Q 036916          413 ---AGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDID-V--RGQNFELIPFGSGRRGCPGISFALQVLLL  486 (538)
Q Consensus       413 ---~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~-~--~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  486 (538)
                         +|+.||||+.|.++.+++||||++|+||++|||+||++...... .  -+....+++||+|+|.|+|++||.+|+++
T Consensus       359 ~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~  438 (473)
T 3dan_A          359 SHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRL  438 (473)
T ss_dssp             CSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHH
T ss_pred             cCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHH
Confidence               99999999999999999999999999999999999997621100 0  01112355566666999999999999999


Q ss_pred             HHHHHHhcceeeCCCC
Q 036916          487 TLASLLHGFEFATPGP  502 (538)
Q Consensus       487 ~l~~ll~~~~~~~~~~  502 (538)
                      +++.||++|++...++
T Consensus       439 ~l~~ll~~f~~~~~~~  454 (473)
T 3dan_A          439 FVIELFRRYDSFEIEL  454 (473)
T ss_dssp             HHHHHHHHEEEEEEEE
T ss_pred             HHHHHHHhCCeEEccC
Confidence            9999999999766543


No 68 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=1.8e-56  Score=434.47  Aligned_cols=371  Identities=15%  Similarity=0.192  Sum_probs=282.1

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccc-c-Cccc--ccc---hhhccCCCceEeccCc
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFC-N-RIKA--LAP---EILGYNYAMFGFSPYG  134 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~-~-~~~~--~~~---~~~~~~~~~~~~~~~g  134 (538)
                      .+++..+.+| ++||||+++++ ++.+.|+|+||+++++++.++  .|+ + ++..  ...   ......+.++ +..  
T Consensus        16 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~--   89 (396)
T 1n40_A           16 DRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNM-GNI--   89 (396)
T ss_dssp             SSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHH-HHH--
T ss_pred             cCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhh-hhH--
Confidence            5678899999 99999999997 788999999999999999875  355 4 3321  111   0111011222 222  


Q ss_pred             hhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhcccccc
Q 036916          135 PYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVR  213 (538)
Q Consensus       135 ~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~  213 (538)
                       .|+++|++++ +.|+.. ++.+.+.+.++++++++.+.+.        ++ ++|+...+ ..+++++++. +||.+.  
T Consensus        90 -~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~~--------~~-~~d~~~~~~~~~~~~vi~~-~~G~~~--  154 (396)
T 1n40_A           90 -ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLITE--------GA-PADLRNDFADPLATALHCK-VLGIPQ--  154 (396)
T ss_dssp             -HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHHH--------CS-CEETTTTTHHHHHHHHHHH-HHTCCG--
T ss_pred             -HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHhc--------CC-CccHHHHHHHHhHHHHHHH-HhCCCh--
Confidence             8999999998 789988 9999999999999999988652        34 79998665 4799999998 899887  


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcch
Q 036916          214 GGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQV  293 (538)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (538)
                               ++ ...+.+....++..   .   ...|          .++..+..+.+ +++.+.++      ..     
T Consensus       155 ---------~~-~~~~~~~~~~~~~~---~---~~~p----------~~~~~~~~~~~-~~~~~~i~------~~-----  196 (396)
T 1n40_A          155 ---------ED-GPKLFRSLSIAFMS---S---ADPI----------PAAKINWDRDI-EYMAGILE------NP-----  196 (396)
T ss_dssp             ---------GG-HHHHHHTHHHHTBC---C---SSCC----------HHHHHHHHHHH-HHHHHHHH------CT-----
T ss_pred             ---------hh-HHHHHHHHHHHhcc---c---cCCC----------HHHHHHHHHHH-HHHHHHHh------CC-----
Confidence                     21 12233333222111   0   0011          13445555666 67766665      11     


Q ss_pred             hcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCC
Q 036916          294 VKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQV  373 (538)
Q Consensus       294 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  373 (538)
                       ....|+++.|++...+++  .....++++..++..+++||+|||+++++|++++|++||++|+++++|++         
T Consensus       197 -~~~~dll~~ll~~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------  264 (396)
T 1n40_A          197 -NITTGLMGELSRLRKDPA--YSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE---------  264 (396)
T ss_dssp             -TCCSHHHHHHHHHHTSGG--GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------
T ss_pred             -CCCCCHHHHHHHhhcccc--cCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH---------
Confidence             134689999998431211  11123788999999999999999999999999999999999999999864         


Q ss_pred             ChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCC
Q 036916          374 IESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHK  453 (538)
Q Consensus       374 ~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~  453 (538)
                               |+++||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+|+||.+   
T Consensus       265 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---  332 (396)
T 1n40_A          265 ---------LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---  332 (396)
T ss_dssp             ---------GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---
T ss_pred             ---------HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---
Confidence                     79999999999999999667999999999999999999999999999999999999999999999963   


Q ss_pred             CccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeee
Q 036916          454 DIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLL  528 (538)
Q Consensus       454 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (538)
                              ..++|||+|+|.|+|++||++|++++++.||++| ++++.++  ..  ++....+........+.|++
T Consensus       333 --------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~--~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          333 --------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVP--ID--QLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             --------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC--GG--GCCBCCSBSBCCBSCCEEEC
T ss_pred             --------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCC--cc--ccccccccccCCcceeeeeC
Confidence                    3579999999999999999999999999999999 5998764  11  12223344445556666653


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=2.3e-55  Score=430.02  Aligned_cols=378  Identities=15%  Similarity=0.147  Sum_probs=288.2

Q ss_pred             CccchHHHHHHHhhCCeeEEEc-CCcceEEecCHHHHHHHHhhCCcccccCcc---cccch-----hhccCCCceEeccC
Q 036916           63 PAAHVTLGSIADKHGPIFMIKL-GMHRALIVSNWEIAKECFTTNDKVFCNRIK---ALAPE-----ILGYNYAMFGFSPY  133 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~-~~~~~v~v~dpe~~~~il~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~  133 (538)
                      .+++..+.++.++ |||+++.. ++.+.++|++++++++++.+. ..|+.++.   .....     .........++..+
T Consensus        38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  115 (426)
T 3rwl_A           38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD  115 (426)
T ss_dssp             TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred             CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence            4578888888876 99999987 456799999999999999887 44555431   11111     00111112346778


Q ss_pred             chhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccc
Q 036916          134 GPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLV  212 (538)
Q Consensus       134 g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~  212 (538)
                      |+.|+++|++++ +.|+...++.+.+.+.+.++++++.+.         +++ ++|+...+ ..+++++++. +||.+. 
T Consensus       116 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~---------~~~-~~dl~~~~~~~~~~~vi~~-l~G~~~-  182 (426)
T 3rwl_A          116 RPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLP---------VGE-EFDWVDRVSIEITTQMLAT-LFDFPF-  182 (426)
T ss_dssp             TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSC---------SSS-CEEHHHHTHHHHHHHHHHH-HHTCCG-
T ss_pred             chHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhh---------cCC-CcchHHHHHHHHHHHHHHH-HcCCCH-
Confidence            999999999998 899999999999999999988887652         234 79987777 5788888775 899876 


Q ss_pred             cCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 036916          213 RGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQ  292 (538)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  292 (538)
                      ..           ...+.+...    .+..      .+....   ....+...+..+.+.+++.+++++++..       
T Consensus       183 ~~-----------~~~~~~~~~----~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------  231 (426)
T 3rwl_A          183 EE-----------RRKLTRWSD----VTTA------APGGGV---VESWDQRKTELLECAAYFQVLWNERVNK-------  231 (426)
T ss_dssp             GG-----------THHHHHHHH----HHTC------CTTSSS---CSSHHHHHHHHHHHHHHHHHHHHHHHTS-------
T ss_pred             HH-----------HHHHHHHHH----HHHh------ccCccc---cccHHHHHHHHHHHHHHHHHHHHHHhhc-------
Confidence            11           112222211    1111      010001   1123455667788888888888876321       


Q ss_pred             hhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCC
Q 036916          293 VVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQ  372 (538)
Q Consensus       293 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  372 (538)
                        +...|+++.|++ ..+..   + ..++++..++..+++||+|||+++++|++++|++||++|+++++|++        
T Consensus       232 --~~~~dll~~ll~-~~~~~---~-ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~--------  296 (426)
T 3rwl_A          232 --DPGNDLISMLAH-SPATR---N-MTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA--------  296 (426)
T ss_dssp             --CCCSSHHHHHHH-CGGGG---G-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred             --CCCCCHHHHHHh-cccCC---C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH--------
Confidence              245699999998 32221   1 23788999999999999999999999999999999999999999853        


Q ss_pred             CChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCC
Q 036916          373 VIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTH  452 (538)
Q Consensus       373 ~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~  452 (538)
                                |+++||+|+||++|+++. ++|++++|++++|+.||||+.|.++.+++||||++|+||++|||+||.+  
T Consensus       297 ----------~l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~--  363 (426)
T 3rwl_A          297 ----------LVETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP--  363 (426)
T ss_dssp             ----------GHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT--
T ss_pred             ----------hHHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC--
Confidence                      899999999999999997 5899999999999999999999999999999999999999999999943  


Q ss_pred             CCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeecc
Q 036916          453 KDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTP  530 (538)
Q Consensus       453 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (538)
                               ..++|||+|+|.|+|++||++|++++++.||++| ++++.++     ....  .+........+.|++++
T Consensus       364 ---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~~--~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          364 ---------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAE-----PERV--RSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             ---------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSC-----CEEC--CCSSBCCEEECEEEEEC
T ss_pred             ---------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCC-----Cccc--ccccccCcceeeEEEeC
Confidence                     3579999999999999999999999999999999 9998754     1121  22233444677777754


No 70 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=2.3e-54  Score=419.10  Aligned_cols=352  Identities=16%  Similarity=0.191  Sum_probs=274.4

Q ss_pred             ccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc-cchhhccCCCceEeccCchhHHHHHh
Q 036916           64 AAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL-APEILGYNYAMFGFSPYGPYWRQIRK  142 (538)
Q Consensus        64 ~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~R~  142 (538)
                      +++..+.++.+ +|||+++..|   .++|++++.+++++.+.  .|+.++... ...... .. ..++..+|+.|+++|+
T Consensus        21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~-~~-~~l~~~dg~~h~~~R~   92 (394)
T 2wiy_A           21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAV-AS-DTALGSDPPHHTVLRR   92 (394)
T ss_dssp             CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGG-GG-GSGGGCCTTHHHHHHH
T ss_pred             CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchh-cc-cccccCCchHHHHHHH
Confidence            56778888866 5899987543   78999999999999764  354332111 111111 11 2346778999999999


Q ss_pred             hhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHHHHHHHHHHHHhccccccCCCCCCccc
Q 036916          143 IATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNALTFNVATRMVVGKRLVRGGTTNHQEI  222 (538)
Q Consensus       143 ~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  222 (538)
                      +++ +.|+...++.+.+.+.+.++++++.+.         .++ ++|+...+..+++++++..+||.+. +         
T Consensus        93 ~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~---------~~~-~~d~~~~~~~~~~~vi~~~~~G~~~-~---------  151 (394)
T 2wiy_A           93 QTN-KWFTPKLVDGWVRTTRELVGDLLDGVE---------AGQ-VIEARRDLAVVPTHVTMARVLQLPE-D---------  151 (394)
T ss_dssp             HHH-TTCSHHHHHHHTHHHHHHHHHHHHTCC---------TTC-CEEHHHHHTHHHHHHHHHHHHTCCC-C---------
T ss_pred             HHH-hccCHHHHHHHHHHHHHHHHHHHHHHh---------ccC-CeeHHHHHHhhhHHHHHHHHcCCCH-h---------
Confidence            998 899999999999999888888876552         244 7999999999999999999999876 1         


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHHH
Q 036916          223 DEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFMD  302 (538)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~  302 (538)
                       + ...+.+.+.....   .   ....|..      ....+..+..+.+.+++.+.+++++.+          ..+|+++
T Consensus       152 -~-~~~~~~~~~~~~~---~---~~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~----------~~~dll~  207 (394)
T 2wiy_A          152 -D-ADAVMEAMFEAML---M---QSAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVN----------PGDGLAD  207 (394)
T ss_dssp             -C-HHHHHHHHHHHHG---G---GSSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHH
T ss_pred             -H-HHHHHHHHHHHHH---h---ccCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcC----------CCCcHHH
Confidence             1 1223322221111   0   0111211      112344556677888888888877642          2358999


Q ss_pred             HHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcccH
Q 036916          303 VMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNLV  382 (538)
Q Consensus       303 ~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp  382 (538)
                      .|++.. ++    +...++++.+++..+++||+|||+++++|++++|++||++|+++++|++                  
T Consensus       208 ~Ll~~~-~~----~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------  264 (394)
T 2wiy_A          208 SLLDAA-RA----GEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES------------------  264 (394)
T ss_dssp             HHHHHH-HT----TSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------
T ss_pred             HHHHhh-hc----CCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH------------------
Confidence            999843 22    1123788999999999999999999999999999999999999999864                  


Q ss_pred             HHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCCC
Q 036916          383 YLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNF  462 (538)
Q Consensus       383 ~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~  462 (538)
                      |+++||+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||++.          .
T Consensus       265 ~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~----------~  333 (394)
T 2wiy_A          265 ARAAIINEMVRMDPPQLS-FLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA----------S  333 (394)
T ss_dssp             GHHHHHHHHHHHSCSBCE-EEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG----------S
T ss_pred             hHHHHHHHHHhhCCCccC-eeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC----------C
Confidence            789999999999999985 58999999999999999999999999999999999999999999999742          2


Q ss_pred             ccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCC
Q 036916          463 ELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATPGP  502 (538)
Q Consensus       463 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~  502 (538)
                      .++|||+|+|.|+|++||++|++++++.||++|+ +++.++
T Consensus       334 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~  374 (394)
T 2wiy_A          334 RNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE  374 (394)
T ss_dssp             CCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSC
T ss_pred             CccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence            4799999999999999999999999999999998 998753


No 71 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=9.2e-55  Score=425.05  Aligned_cols=377  Identities=18%  Similarity=0.208  Sum_probs=285.1

Q ss_pred             CccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccch----hhccCCCceEeccCchhHH
Q 036916           63 PAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPE----ILGYNYAMFGFSPYGPYWR  138 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~w~  138 (538)
                      .+++.+  ++.++||||++++.++.. ++|++++++++++.++...+..+.......    .........++..+|+.|+
T Consensus        33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  109 (416)
T 3p3o_A           33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADHR  109 (416)
T ss_dssp             TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHHHH
T ss_pred             cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhcCccccCCchHHH
Confidence            456666  555689999999987666 999999999999988742221111000000    0000011235778899999


Q ss_pred             HHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCCC
Q 036916          139 QIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGTT  217 (538)
Q Consensus       139 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~  217 (538)
                      ++|++++ +.|+...++.+.+.+.++++++++.+ .        +|  .+|+...+ ..+++++++. +||.+.      
T Consensus       110 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~--------~g--~~d~~~~~~~~~~~~vi~~-l~G~~~------  170 (416)
T 3p3o_A          110 RLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P--------QG--DFDFVQHFPHPLPALVMCQ-LLGFPL------  170 (416)
T ss_dssp             HHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C--------SS--SEEHHHHTTTHHHHHHHHH-HHTCCG------
T ss_pred             HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c--------cC--CccHHHHHHHHHHHHHHHH-HhCCCH------
Confidence            9999998 89999999999999999999988776 2        23  58865555 5699999998 588876      


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhccc
Q 036916          218 NHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEE  297 (538)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  297 (538)
                           ++ ...+.+....+...         +...   ......+...+..+.+.+++.+.++++++.          ..
T Consensus       171 -----~~-~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~----------~~  222 (416)
T 3p3o_A          171 -----ED-YDTVGRLSIETNLG---------LALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE----------PG  222 (416)
T ss_dssp             -----GG-HHHHHHHHHTTCGG---------GTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS----------CC
T ss_pred             -----HH-HHHHHHHHHHHHhh---------cccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC----------CC
Confidence                 11 12232222211111         1100   011234566778888899999999887762          34


Q ss_pred             ccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhh
Q 036916          298 NDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESD  377 (538)
Q Consensus       298 ~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  377 (538)
                      .|+++.|++...+.     ...++++..++..+++||+|||+++++|++++|++||++|+++++|++             
T Consensus       223 ~dll~~ll~~~~~~-----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-------------  284 (416)
T 3p3o_A          223 DDLTSDIVRAFHDG-----VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-------------  284 (416)
T ss_dssp             SSHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------
T ss_pred             ccHHHHHHHhhccC-----CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------
Confidence            68999999843221     123888999999999999999999999999999999999999999875             


Q ss_pred             hcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccc
Q 036916          378 IKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDV  457 (538)
Q Consensus       378 ~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~  457 (538)
                           |+++||+|+||++|+++..++|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||.+       
T Consensus       285 -----~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~-------  352 (416)
T 3p3o_A          285 -----LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE-------  352 (416)
T ss_dssp             -----GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS-------
T ss_pred             -----HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC-------
Confidence                 79999999999999997777999999999999999999999999999999999999999999999732       


Q ss_pred             cCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCCCCCCCCCccCccCccccccccceeeecc
Q 036916          458 RGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTP  530 (538)
Q Consensus       458 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (538)
                          ..++|||+|+|.|+|++||++|++++++.||++|+ +++.++     ..+.  .+........+.|++++
T Consensus       353 ----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-----~~~~--~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          353 ----APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE-----ITWR--HELGVAGPDALPLRFGA  415 (416)
T ss_dssp             ----SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC-----CEEC--CCTTCCCEEECEEEESC
T ss_pred             ----CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC-----Ccee--cCCCccCcceeeEEEec
Confidence                35799999999999999999999999999999995 888754     2222  22233344667777753


No 72 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=3.6e-54  Score=414.39  Aligned_cols=356  Identities=15%  Similarity=0.218  Sum_probs=272.6

Q ss_pred             chHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcc--c-ccch----h--hccCCCceEeccCchh
Q 036916           66 HVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIK--A-LAPE----I--LGYNYAMFGFSPYGPY  136 (538)
Q Consensus        66 ~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~--~-~~~~----~--~~~~~~~~~~~~~g~~  136 (538)
                      +..++++ ++||||+++  +  +.++|+||+++++++.+. ..|++++.  . ....    .  ++...+..++..+|+.
T Consensus         2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~   75 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPL   75 (368)
T ss_dssp             HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTH
T ss_pred             CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCChH
Confidence            4567777 589999987  4  589999999999999875 46776653  1 0110    1  1110102245668999


Q ss_pred             HHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCC
Q 036916          137 WRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGG  215 (538)
Q Consensus       137 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~  215 (538)
                      |+++|++++ +.|+...++.+.+.+.++++++++.+ +.        |  .+|+.+++ ..+++++++.+ ||.+.    
T Consensus        76 h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~~--------g--~~d~~~~~~~~~~~~vi~~~-~G~~~----  138 (368)
T 1io7_A           76 HDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-DP--------R--EDDIVKKLAVPLPIIVISKI-LGLPI----  138 (368)
T ss_dssp             HHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-CT--------T--SEEHHHHTTTHHHHHHHHHH-HTCCG----
T ss_pred             HHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-hc--------C--CccHHHHHHHHHHHHHHHHH-hCCCH----
Confidence            999999998 89999999999999999999888776 31        3  59999877 78999999998 99887    


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhc
Q 036916          216 TTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVK  295 (538)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  295 (538)
                             +. ...+.+....+.      ... ..|.        ..++..+..+.+.+++.+.+        .       
T Consensus       139 -------~~-~~~~~~~~~~~~------~~~-~~p~--------~~~~~~~~~~~~~~~~~~~i--------~-------  180 (368)
T 1io7_A          139 -------ED-KEKFKEWSDLVA------FRL-GKPG--------EIFELGKKYLELIGYVKDHL--------N-------  180 (368)
T ss_dssp             -------GG-HHHHHHHGGGCT------TSC-CCTT--------CHHHHHHHHHHHHHHHHHHT--------T-------
T ss_pred             -------HH-HHHHHHHHHHHH------hcc-CChH--------HHHHHHHHHHHHHHHHHHHh--------C-------
Confidence                   21 112222111110      000 0121        12344555566666666655        1       


Q ss_pred             ccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCCh
Q 036916          296 EENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIE  375 (538)
Q Consensus       296 ~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  375 (538)
                      ...|+++.|++.         ...++++.+++..+++||+|||+++++|++++|++|| +|+++++| +           
T Consensus       181 ~~~d~l~~ll~~---------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~-----------  238 (368)
T 1io7_A          181 SGTEVVSRVVNS---------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N-----------  238 (368)
T ss_dssp             SSCHHHHHHHTS---------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T-----------
T ss_pred             CCCCHHHHHHhc---------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c-----------
Confidence            235899999862         1237889999999999999999999999999999999 99999999 2           


Q ss_pred             hhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCc
Q 036916          376 SDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDI  455 (538)
Q Consensus       376 ~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~  455 (538)
                             |+++||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+|||+-      
T Consensus       239 -------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------  304 (368)
T 1io7_A          239 -------LYLKAIEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNP------  304 (368)
T ss_dssp             -------CHHHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCS------
T ss_pred             -------hHHHHHHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCCC------
Confidence                   68999999999999999 5699999999999999999999999999999999999999999999941      


Q ss_pred             cccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcce-eeCCCCCCCCCCCccCccCccccccccceeeeccCC
Q 036916          456 DVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGFE-FATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTPRL  532 (538)
Q Consensus       456 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  532 (538)
                            ..++|||+|+|.|+|++||++|++++++.||++|+ +++.+.      .+.  .+.......++.|++++|+
T Consensus       305 ------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~------~~~--~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          305 ------NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDT------EKV--PNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             ------CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEEE------EEC--CCSSBCCEEEEEEEEEC--
T ss_pred             ------CCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecCc------eec--cCCcccCCceeEEEeccCC
Confidence                  24799999999999999999999999999999996 998641      121  1233455678999999884


No 73 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=5.6e-54  Score=408.89  Aligned_cols=319  Identities=16%  Similarity=0.169  Sum_probs=248.7

Q ss_pred             HhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHHhhhhhhcCCHHH
Q 036916           74 DKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHR  153 (538)
Q Consensus        74 ~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~  153 (538)
                      ++||||+++   |  .++|+||+++++++.++ ..|++++......   ..+.+ ++..+|+.|+++|++++ +.|+...
T Consensus         2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~---~~~~~-l~~~~g~~~~~~R~~~~-~~fs~~~   70 (343)
T 2rfb_A            2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN---AGGIS-FITMDNPEHKEFRDISA-PYFLPSK   70 (343)
T ss_dssp             -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCG-GGGCCHHHHHHHHHHHH-HHHSHHH
T ss_pred             CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC---ccccc-cccCCchHHHHHHHHhh-hhcCHHH
Confidence            579999976   3  89999999999999876 4677665211111   12223 35668999999999998 8999999


Q ss_pred             HHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHH
Q 036916          154 LEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKA  232 (538)
Q Consensus       154 l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  232 (538)
                      ++.+.+.+.++++++++.+.             ++|+.+++ ..+++++++.+ ||.+. +          + ...+.+.
T Consensus        71 l~~~~~~i~~~~~~l~~~l~-------------~~d~~~~~~~~~~~~vi~~~-~G~~~-~----------~-~~~~~~~  124 (343)
T 2rfb_A           71 INDYKDFIEETSNDLIKNID-------------NKDIISEYAVRLPVNIISKI-LGIPD-S----------D-MPLFKLW  124 (343)
T ss_dssp             HGGGHHHHHHHHHHHHTTCT-------------TSCHHHHTTTHHHHHHHHHH-HTCCG-G----------G-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcc-------------ccCHHHHHhhhhhHHHHHHH-cCCCH-H----------H-HHHHHHH
Confidence            99999999999888876542             48998865 89999999998 99887 1          1 1233333


Q ss_pred             HHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhccc
Q 036916          233 IRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAE  312 (538)
Q Consensus       233 ~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  312 (538)
                      ...++..        ..|.+.      ..++. +..+.+.+++.+.+                 ..| ++.|++ ...  
T Consensus       125 ~~~~~~~--------~~p~~~------~~~~~-~~~~~~~~~~~~~i-----------------~~d-l~~ll~-~~~--  168 (343)
T 2rfb_A          125 SDYIIGN--------KRDENF------NYVNN-RMVSRLLEIFKSDS-----------------HGI-INVLAG-SSL--  168 (343)
T ss_dssp             HHHHHTS--------CCSSHH------HHHHH-HHHHHHHHHHHSCC-----------------SSH-HHHHHT-CBC--
T ss_pred             HHHHhhc--------cCcchh------hHHHH-HHHHHHHHHHHHHH-----------------hcc-HHHHHh-hhc--
Confidence            3332221        112210      11222 33334444333322                 246 888886 221  


Q ss_pred             CCCCCCh-hhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhh
Q 036916          313 ELPSFDA-DTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKET  391 (538)
Q Consensus       313 ~~~~~~~-~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~  391 (538)
                        ++... ++++..++..+++||+|||+++++|++++|++||++|+++++|+                     ++||+|+
T Consensus       169 --~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~  225 (343)
T 2rfb_A          169 --KNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEET  225 (343)
T ss_dssp             --SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHH
T ss_pred             --CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHH
Confidence              12223 78899999999999999999999999999999999999999985                     7999999


Q ss_pred             ccCCCCC-CCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCC
Q 036916          392 LRLCPAA-PLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSG  470 (538)
Q Consensus       392 lRl~p~~-~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G  470 (538)
                      ||++|++ + .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+||||             ..++|||.|
T Consensus       226 lRl~p~~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-------------~~~~~FG~G  291 (343)
T 2rfb_A          226 LRYYSPIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-------------EMHLAFGIG  291 (343)
T ss_dssp             HHHSCSBCC-BCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-------------SCCCTTCCS
T ss_pred             HhhCccccc-ccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-------------CCCccCCCC
Confidence            9999999 8 569999999999999999999999999999999999999999999995             146999999


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhcce-eeCCCC
Q 036916          471 RRGCPGISFALQVLLLTLASLLHGFE-FATPGP  502 (538)
Q Consensus       471 ~r~C~G~~~A~~e~~~~l~~ll~~~~-~~~~~~  502 (538)
                      +|.|+|++||++|++++++.|+++|+ +++.++
T Consensus       292 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  324 (343)
T 2rfb_A          292 IHMCLGAPLARLEASIALNDILNHFKRIKIDYK  324 (343)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred             CccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence            99999999999999999999999996 998763


No 74 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=2e-53  Score=408.36  Aligned_cols=353  Identities=17%  Similarity=0.170  Sum_probs=270.4

Q ss_pred             chHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc---c-----c-hhhccC-CCceEeccCch
Q 036916           66 HVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL---A-----P-EILGYN-YAMFGFSPYGP  135 (538)
Q Consensus        66 ~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~---~-----~-~~~~~~-~~~~~~~~~g~  135 (538)
                      +..+.++ ++||||++++ |   .++|+||++++++|.++ ..|++++...   .     . ...+.. ..+ ++..+|+
T Consensus         2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg~   74 (367)
T 3b4x_A            2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYT-MLTSDPP   74 (367)
T ss_dssp             HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSS-GGGCCTT
T ss_pred             CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccc-cccCCch
Confidence            3456777 4799999887 3   89999999999999876 4676654211   1     1 111110 123 3556899


Q ss_pred             hHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHH-HHHHHHHHHHHHhccccccC
Q 036916          136 YWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIF-NALTFNVATRMVVGKRLVRG  214 (538)
Q Consensus       136 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~  214 (538)
                      .|+++|++++ +.|+...++.  +.+.++++++++.+.          |  .+|+...+ ..+++++++. +||.+ .+ 
T Consensus        75 ~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~----------g--~~d~~~~~~~~~~~~vi~~-~~G~~-~~-  136 (367)
T 3b4x_A           75 LHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD----------E--EFDVIESFAIPLPILVISK-MLGIN-PD-  136 (367)
T ss_dssp             HHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC----------S--EEEHHHHTTTHHHHHHHHH-HHTCC-CC-
T ss_pred             hHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc----------C--CcchHHHHHHhhHHHHHHH-HcCCC-Cc-
Confidence            9999999998 7899988877  888888887776542          3  59999765 7999999999 79987 21 


Q ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchh
Q 036916          215 GTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVV  294 (538)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  294 (538)
                              .+   .+.+....+.....      ..|..        .+.. +..+.+.+++.+.++++++.         
T Consensus       137 --------~~---~~~~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~---------  181 (367)
T 3b4x_A          137 --------VK---KVKDWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKGK---------  181 (367)
T ss_dssp             --------HH---HHHHHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTTT---------
T ss_pred             --------HH---HHHHHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhcC---------
Confidence                    22   23333333322111      12211        1112 45667778888888776542         


Q ss_pred             cccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCC
Q 036916          295 KEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVI  374 (538)
Q Consensus       295 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  374 (538)
                       ...|+++.|++.         ...++++.+++..+++||+|||+++++|++++|++ |++|+++++|++          
T Consensus       182 -~~~dll~~ll~~---------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~----------  240 (367)
T 3b4x_A          182 -EIVDLTGKIANS---------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA----------  240 (367)
T ss_dssp             -CCSSHHHHHHTS---------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS----------
T ss_pred             -CCCCHHHHHHhc---------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc----------
Confidence             235899999872         12378899999999999999999999999999999 999999999954          


Q ss_pred             hhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCC
Q 036916          375 ESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKD  454 (538)
Q Consensus       375 ~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~  454 (538)
                                ++||+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.     
T Consensus       241 ----------~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-----  304 (367)
T 3b4x_A          241 ----------LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP-----  304 (367)
T ss_dssp             ----------HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS-----
T ss_pred             ----------hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC-----
Confidence                      799999999999999 5699999999999999999999999999999999999999999999984     


Q ss_pred             ccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeeecc
Q 036916          455 IDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLLTP  530 (538)
Q Consensus       455 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (538)
                             ..++|||+|+|.|+|++||++|++++++.||++| ++++.++      .+.  .+........+.|++++
T Consensus       305 -------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~------~~~--~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          305 -------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK------EKI--DNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             -------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE------EEC--CCSSBCSEEEEEEEEEE
T ss_pred             -------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc------ccc--ccccccCcceEEEEecC
Confidence                   2479999999999999999999999999999999 6998752      121  13334445677777743


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=1.9e-52  Score=407.52  Aligned_cols=386  Identities=16%  Similarity=0.211  Sum_probs=272.9

Q ss_pred             CcCccccc---cccccCCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccc---hh
Q 036916           47 GAWPLIGH---LHLLGGQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAP---EI  120 (538)
Q Consensus        47 ~~~p~~G~---~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~---~~  120 (538)
                      .++|.+|-   ...+.   .+++..++++. ++|||+++  .+.++++|++++++++++.+.. .|+........   ..
T Consensus        18 ~~~P~~~~dp~~~~~~---~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~   90 (412)
T 4dnj_A           18 AGVPHLGIDPFALDYF---ADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKE   90 (412)
T ss_dssp             TTSCEECCCTTSHHHH---HSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTS
T ss_pred             CCCCccCCCCCCHHHH---hCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccc
Confidence            35676662   12233   46777888875 47999865  5667899999999999997763 44432221111   11


Q ss_pred             hccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccH-HHHHHHHHH
Q 036916          121 LGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEM-KEIFNALTF  199 (538)
Q Consensus       121 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl-~~~~~~~~~  199 (538)
                      ......+.++..+|+.|+++|++++ +.|+.++++.+.+.+.+.++++++.+.+.        ++ .+|+ .++...+.+
T Consensus        91 ~~~~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~--------~~-~~D~v~~~~~~~~~  160 (412)
T 4dnj_A           91 KPWRPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLAR--------GG-NIDAIADLAEAYPL  160 (412)
T ss_dssp             CCSSCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHHT--------TS-EEETCCCCCCHHHH
T ss_pred             ccccCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhcc--------CC-CceeHHHHHhhhhH
Confidence            1112223456778999999999998 89999999999999999999999888653        33 4564 455566777


Q ss_pred             HHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHH
Q 036916          200 NVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWL  279 (538)
Q Consensus       200 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  279 (538)
                      ++++.+ +|.+..+         .+.   +......+......                  .....+........+...+
T Consensus       161 ~~i~~l-~g~~~~~---------~~~---~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~  209 (412)
T 4dnj_A          161 SVFPDA-MGLKQEG---------REN---LLPYAGLVFNAFGP------------------PNELRQSAIERSAPHQAYV  209 (412)
T ss_dssp             HHHHHH-HTCCSTT---------GGG---HHHHHHHHHHHTSC------------------SSHHHHHHHHTCHHHHHHH
T ss_pred             hHHHHH-cCCchhh---------hhh---hhhhhhcccccccc------------------cHHHHHHHHHHHHHHHHHH
Confidence            777765 4544311         111   12222222222110                  0011111111222222333


Q ss_pred             HHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHH
Q 036916          280 EEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKV  359 (538)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l  359 (538)
                      .+..++..        ...+.++.++....+.    ....++++..++..+++||+|||+++++|++++|++||++|+|+
T Consensus       210 ~~~~~~~~--------~~~~~~~~l~~~~~~~----~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~L  277 (412)
T 4dnj_A          210 AEQCQRPN--------LAPGGFGACIHAFSDT----GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARL  277 (412)
T ss_dssp             HHHTSGGG--------SCTTSHHHHHHHTTTT----TSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHhhc--------cccccchhhhHhhhhc----cchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHH
Confidence            33322221        1224455555523222    11237889999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCC
Q 036916          360 QNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEE  439 (538)
Q Consensus       360 ~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  439 (538)
                      ++|.                  .|+.++++|++|++|+++.. +|.+++|++++|+.||||+.|.++.+++||||++|+|
T Consensus       278 r~~~------------------~~~~~~~eE~lR~~pp~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~d  338 (412)
T 4dnj_A          278 RADP------------------SLARNAFEEAVRFESPVQTF-FRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDD  338 (412)
T ss_dssp             HHCG------------------GGHHHHHHHHHHHHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSS
T ss_pred             HhCc------------------cccccccceeeeecCCcccc-cccCCCCeEECCccCCCCCeEEeehhhccCChhhCCC
Confidence            9864                  37899999999999999865 8999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccc
Q 036916          440 PNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTN  518 (538)
Q Consensus       440 p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~  518 (538)
                      |++|+|+||.            ..++|||+|+|.|+|++||++|++++++.||++| ++++.++     ..+  ..+.+.
T Consensus       339 P~~F~PeR~~------------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~-----~~~--~~~~~~  399 (412)
T 4dnj_A          339 PDRYDITRKT------------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP-----LKR--RFNNTL  399 (412)
T ss_dssp             TTSCCTTSCC------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-----CEE--EECSSB
T ss_pred             ccccCCCCCC------------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC-----Cee--ecCCCc
Confidence            9999999973            2469999999999999999999999999999999 8998754     222  234445


Q ss_pred             cccccceeeecc
Q 036916          519 LKATPLQVLLTP  530 (538)
Q Consensus       519 ~~~~~~~~~~~~  530 (538)
                      .....+.|++++
T Consensus       400 rg~~~LpV~~tP  411 (412)
T 4dnj_A          400 RGLESLPIQLTP  411 (412)
T ss_dssp             EEEEECEEEEEE
T ss_pred             cCCcceeEEEEe
Confidence            556788888865


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=9.9e-48  Score=373.16  Aligned_cols=374  Identities=14%  Similarity=0.159  Sum_probs=266.3

Q ss_pred             CccchHHHHHHHhhC-CeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccccchhhccCCCceEeccCchhHHHHH
Q 036916           63 PAAHVTLGSIADKHG-PIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKALAPEILGYNYAMFGFSPYGPYWRQIR  141 (538)
Q Consensus        63 ~~~~~~~~~~~~~yG-~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R  141 (538)
                      .+++..++++.++.+ ++++...+ ....+|+.++++++++.+. ..|+........ ..+..........+++.|+++|
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~-~~~~~~~~~~~~~D~p~H~r~R  113 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSDP-TRFSSEVIFLPK-EAGEKAQMVPTKMDPPEHTPYR  113 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTCT-TTEESSCCSSST-TSSCSSCTTTTTCCTTTHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcCc-hhccCCCccccc-ccccccccCcccCCcHHHHHHH
Confidence            456777888776654 45554333 3678999999999999875 456554322111 1122222234566899999999


Q ss_pred             hhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHHHHHHH-HHHHHHHHHHhccccccCCCCCCc
Q 036916          142 KIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMKEIFNA-LTFNVATRMVVGKRLVRGGTTNHQ  220 (538)
Q Consensus       142 ~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~  220 (538)
                      ++++ +.|+.+.++.+.+.+.+.++++++.+.+.        |  .+|+...+.. +.+.+++ .++|...         
T Consensus       114 rll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~~--------g--~~D~v~~~a~~l~~~vi~-~llg~~~---------  172 (417)
T 4dxy_A          114 KALD-KGLNLAKIRKVEDKVREVASSLIDSFAAR--------G--ECDFAAEYAELFPVHVFM-ALADLPL---------  172 (417)
T ss_dssp             HHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHTT--------S--EEEHHHHTTTTHHHHHHH-HHTTCCG---------
T ss_pred             HHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhhc--------C--CeeeHHHHHhhhHHHHHH-HHcCCCH---------
Confidence            9998 89999999999999999999999887542        3  5787666544 4455554 5677765         


Q ss_pred             cchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhhccCCCcchhcccccH
Q 036916          221 EIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKELDQILEGWLEEHKQKRISSDDQVVKEENDF  300 (538)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~  300 (538)
                         +....+.+....+....      ...|       ...........+.+..++.+++++++.          +..+|+
T Consensus       173 ---~d~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~~~~~~~~~~~li~~rr~----------~~~ddl  226 (417)
T 4dxy_A          173 ---EDIPVLSEYARQMTRPE------GNTP-------EEMATDLEAGNNGFYAYVDPIIRARVG----------GDGDDL  226 (417)
T ss_dssp             ---GGHHHHHHHHHHHHSCC------CSSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTT----------CCCCSH
T ss_pred             ---HHHHHHHhhhhhhcccc------ccCh-------HHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCccch
Confidence               12223333332222110      0000       112344556667777888888877654          244688


Q ss_pred             HHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHHhChHHHHHHHHHHHHhhcCCCCCChhhhcc
Q 036916          301 MDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTLNHLDVLKKVQNELDTHIGRERQVIESDIKN  380 (538)
Q Consensus       301 l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  380 (538)
                      ++.|+. ....   .....++++..++..+++||+|||+++++|++++|++||++++++++|...+              
T Consensus       227 ~s~L~~-~~~~---~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~--------------  288 (417)
T 4dxy_A          227 ITLMVN-SEIN---GERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL--------------  288 (417)
T ss_dssp             HHHHHT-CEET---TEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH--------------
T ss_pred             hhhhcc-cccc---CCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc--------------
Confidence            998886 2221   1112388899999999999999999999999999999999999999986642              


Q ss_pred             cHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchhccCCCCCCCCCCCCCCccCCCCCCccccCC
Q 036916          381 LVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKIHRDPNIWEEPNEFRPERFLTTHKDIDVRGQ  460 (538)
Q Consensus       381 lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~  460 (538)
                          ..++ |.+|++++++. +.|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+|+            
T Consensus       289 ----~~av-ee~~~~~~~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~------------  350 (417)
T 4dxy_A          289 ----MRGA-EEMFRRFPVVS-EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR------------  350 (417)
T ss_dssp             ----HHTH-HHHHHHSCCBE-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------------
T ss_pred             ----ccce-eeeeccccccc-cccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC------------
Confidence                2233 44444454443 48999999999999999999999999999999999999999999993            


Q ss_pred             CCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCCCCCCCCCccCccCccccccccceeee
Q 036916          461 NFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGPGDTEPLDLSEGVGLTNLKATPLQVLL  528 (538)
Q Consensus       461 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (538)
                      +..++|||+|+|.|+|++||++|++++|+.||++| ++++.++  .  ..+. ..+.+ .....+.|++
T Consensus       351 ~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~--~--~~~~-~~~~~-~g~~~LPv~~  413 (417)
T 4dxy_A          351 SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEG--E--TPIY-HSGIV-AAVENVPLVW  413 (417)
T ss_dssp             CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTT--C--CCEE-ECSSB-CEEECCEEEC
T ss_pred             CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCC--C--Ceee-cCCcc-cCceeeeEEe
Confidence            24579999999999999999999999999999999 9999764  2  1221 22222 3345677766


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.1e-45  Score=350.18  Aligned_cols=315  Identities=13%  Similarity=0.114  Sum_probs=213.0

Q ss_pred             CCCC-CCcCcccccccccc--CCCCccchHHHHHHHhhCCeeEEEcCCcceEEecCHHHHHHHHhhCCcccccCcccc-c
Q 036916           42 VPEP-GGAWPLIGHLHLLG--GQKPAAHVTLGSIADKHGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFCNRIKAL-A  117 (538)
Q Consensus        42 ~ppg-p~~~p~~G~~~~~~--~~~~~~~~~~~~~~~~yG~v~~i~~~~~~~v~v~dpe~~~~il~~~~~~~~~~~~~~-~  117 (538)
                      +||| +.++|++|+...+.  ....+++..+++++++  ||+++.   .+.++|++++.+++++.++  .|+.++... .
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~  107 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE  107 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence            4556 33679999765531  1225678889998876  998764   4689999999999999874  465543211 0


Q ss_pred             c------hhhccCCCceEeccCchhHHHHHhhhhhhcCCHHHHHhcHHHHHHHHHHHHHHHHHHHhhhccCCCCccccHH
Q 036916          118 P------EILGYNYAMFGFSPYGPYWRQIRKIATLEILSNHRLEMLKHVRESEVRTSMKELYDEWMKLRGDSGKALVEMK  191 (538)
Q Consensus       118 ~------~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~li~~l~~~~~~~~~~~g~~~vdl~  191 (538)
                      .      ..... ..+ ++..+|+.|       + +.|+     . .+.+.+.++++++.+.          |  .+|+.
T Consensus       108 ~~~~~~~~~~~~-~~~-l~~~dg~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~----------g--~~Dl~  159 (381)
T 2yjn_B          108 WMRAAGAPPAEW-AQP-FRDVHAASW-------E-GEVP-----D-VGELAESFAGLLPGAG----------A--RLDLV  159 (381)
T ss_dssp             HHHHHTCCHHHH-THH-HHHHHHCCC-------C-SCCC-----C-CSCHHHHTSTTSCC------------------CC
T ss_pred             cccccccccchh-hhh-hhhCCchhh-------h-hccC-----C-hHHHHHHHHHHHHhcc----------C--cchHH
Confidence            0      00001 112 345568888       3 6677     3 6777777777776553          2  58888


Q ss_pred             HHH-HHHHHHHHHHHHhccccccCCCCCCccchHHHHHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHH
Q 036916          192 EIF-NALTFNVATRMVVGKRLVRGGTTNHQEIDEENNRCRKAIRKLMELTGAFAIADSVPFLRWLDLDGIEKSMKRTAKE  270 (538)
Q Consensus       192 ~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~  270 (538)
                      ..+ ..+++++|+.+ ||.+. +          +.  .+.+.+......          +    +. ....+   +..  
T Consensus       160 ~~~a~~l~~~vi~~l-~G~~~-~----------~~--~~~~~~~~~~~~----------~----~~-~~~~~---~~~--  205 (381)
T 2yjn_B          160 GDFAWQVPVQGMTAV-LGAAG-V----------LR--GAAWDARVSLDA----------Q----LS-PQQLA---VTE--  205 (381)
T ss_dssp             CCCCTHHHHHHHHTC-------C----------CH--HHHHHHTTHHHH----------T----TS-CCCHH---HHH--
T ss_pred             HHHHHHHHHHHHHHH-cCCCH-H----------HH--HHHHHHHHhccC----------C----CC-HHHHH---HHH--
Confidence            665 69999999985 99887 1          11  121111100000          0    00 00000   000  


Q ss_pred             HHHHHHHHHHHHHhhccCCCcchhcccccHHHHHHHHHhcccCCCCCChhhHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 036916          271 LDQILEGWLEEHKQKRISSDDQVVKEENDFMDVMLSALADAEELPSFDADTITKATCLALILGGTDTTTFTLTWALTLTL  350 (538)
Q Consensus       271 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  350 (538)
                                                  +.++.++              +    +++..+++||+|||+.+++|++++|+
T Consensus       206 ----------------------------~~~~~l~--------------~----~~~~~ll~aG~eTt~~~l~~~l~~L~  239 (381)
T 2yjn_B          206 ----------------------------AAVAALP--------------A----DPALRALFAGAEMTANTVVDAVLAVS  239 (381)
T ss_dssp             ----------------------------HHHHHCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------------------------HHHHHHH--------------H----HHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence                                        0000000              0    35789999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhcCCCCCChhhhcccHHHHHHHHhhccCCCCCCCCcceeccccccccceEeCCCCEEEEecchh
Q 036916          351 NHLDVLKKVQNELDTHIGRERQVIESDIKNLVYLQAIVKETLRLCPAAPLSIPHESMEDCTIAGYHVPAGTRLFVNIAKI  430 (538)
Q Consensus       351 ~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~~~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  430 (538)
                      +||++|+++++|++                  |+++||+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++
T Consensus       240 ~~P~~~~~l~~e~~------------------~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~  300 (381)
T 2yjn_B          240 AEPGLAERIADDPA------------------AAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAA  300 (381)
T ss_dssp             HCHHHHHHHHHCCC--------------------HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHH
T ss_pred             HCHHHHHHHhhCHH------------------HHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHH
Confidence            99999999999865                  899999999999999996 58999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccCCCCCCCCCChHHHHHHHHHHHHHHHhcc-eeeCCCC
Q 036916          431 HRDPNIWEEPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLTLASLLHGF-EFATPGP  502 (538)
Q Consensus       431 ~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~~-~~~~~~~  502 (538)
                      ||||++|+||++|||+||.+           ..+++||+| |.|+|++||.+|++++++.|+++| ++++.++
T Consensus       301 ~rDp~~~~dp~~F~p~R~~~-----------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~  361 (381)
T 2yjn_B          301 NRDPEVFAEPDRLDVDRPDA-----------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP  361 (381)
T ss_dssp             TTCTTTSSSTTSCCSSCSCC-----------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred             cCCcccCCCccccCCCCCCC-----------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence            99999999999999999963           357999999 999999999999999999999999 9999764


No 78 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=36.81  E-value=1.2e+02  Score=21.91  Aligned_cols=58  Identities=21%  Similarity=0.158  Sum_probs=39.9

Q ss_pred             CCCCCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcC------CcceEEecCHHHHHHHHhh
Q 036916           42 VPEPGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLG------MHRALIVSNWEIAKECFTT  104 (538)
Q Consensus        42 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~------~~~~v~v~dpe~~~~il~~  104 (538)
                      .||.|..--++|++..-.     ..+.+.++..+||+|..+.+.      +.-+|-..+++.+...+..
T Consensus         3 ~~~~~~~~l~V~nlp~~~-----t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~   66 (115)
T 3lqv_A            3 LPPEVNRILYIRNLPYKI-----TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH   66 (115)
T ss_dssp             CCTTCCSEEEEESCCTTC-----CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence            345554455777765322     245688888999999888762      2346778899999888863


No 79 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=34.76  E-value=1e+02  Score=20.49  Aligned_cols=39  Identities=15%  Similarity=-0.072  Sum_probs=30.5

Q ss_pred             chHHHHHHHhhCCeeEEEcC-------CcceEEecCHHHHHHHHhh
Q 036916           66 HVTLGSIADKHGPIFMIKLG-------MHRALIVSNWEIAKECFTT  104 (538)
Q Consensus        66 ~~~~~~~~~~yG~v~~i~~~-------~~~~v~v~dpe~~~~il~~  104 (538)
                      .+.++++..+||+|..+.+.       +.-+|-..+++.++..+..
T Consensus        21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~   66 (81)
T 2krb_A           21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   66 (81)
T ss_dssp             HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence            46678888999999998875       2346777899999988864


No 80 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=33.31  E-value=34  Score=16.43  Aligned_cols=12  Identities=33%  Similarity=0.620  Sum_probs=9.8

Q ss_pred             HHHHHHHHHHHH
Q 036916          354 DVLKKVQNELDT  365 (538)
Q Consensus       354 ~~~~~l~~Ei~~  365 (538)
                      ..|.++|+|+.+
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            578999999875


No 81 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.76  E-value=77  Score=22.49  Aligned_cols=62  Identities=15%  Similarity=0.124  Sum_probs=40.7

Q ss_pred             ccccccccccCCCCccchHHHHHHHhhC-CeeEEEcCCcceEEecCHHHHHHHHhh-CCcccccCc
Q 036916           50 PLIGHLHLLGGQKPAAHVTLGSIADKHG-PIFMIKLGMHRALIVSNWEIAKECFTT-NDKVFCNRI  113 (538)
Q Consensus        50 p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~v~~i~~~~~~~v~v~dpe~~~~il~~-~~~~~~~~~  113 (538)
                      -+++|+..-.. .......+.++..+|| +|..+ .+|.-+|...|.+.++..++. ++..+-+|+
T Consensus        12 lYV~NL~~~~~-~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~   75 (96)
T 2diu_A           12 LYVYNLPANKD-GKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR   75 (96)
T ss_dssp             EEEESCCTTSC-HHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred             EEEeCCCCcCC-HHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence            34677654321 0112334778889995 99988 568889999999999988864 333443443


No 82 
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.02  E-value=1.1e+02  Score=21.81  Aligned_cols=54  Identities=15%  Similarity=0.158  Sum_probs=37.1

Q ss_pred             cccccccccCCCCccchHHHHHHHhhCCeeEEEcC--------CcceEEecCHHHHHHHHhhCCccc
Q 036916           51 LIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLG--------MHRALIVSNWEIAKECFTTNDKVF  109 (538)
Q Consensus        51 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~--------~~~~v~v~dpe~~~~il~~~~~~~  109 (538)
                      ++|++..-     -..+.+.++-.+||+|..+.+.        |.-+|...+++.++..+..++..+
T Consensus        15 fV~~Lp~~-----~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~   76 (103)
T 1s79_A           15 YIKGFPTD-----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKY   76 (103)
T ss_dssp             EEECCCTT-----CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCC
T ss_pred             EEECCCCC-----CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEE
Confidence            55665432     2245688888999999888764        234677789999999887443333


No 83 
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=30.54  E-value=77  Score=23.10  Aligned_cols=50  Identities=16%  Similarity=0.050  Sum_probs=35.9

Q ss_pred             ccccccccccCCCCccchHHHHHHHhhCCeeEEEcCC-------cceEEecCHHHHHHHHhh
Q 036916           50 PLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGM-------HRALIVSNWEIAKECFTT  104 (538)
Q Consensus        50 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~-------~~~v~v~dpe~~~~il~~  104 (538)
                      -++|++..-.     -.+.++++-.+||+|..+.+..       .-+|-..+++.++..+..
T Consensus         8 lfV~nLp~~~-----te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~   64 (115)
T 4f25_A            8 IFIKNLDKSI-----DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK   64 (115)
T ss_dssp             EEEESCCTTC-----CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred             EEECCCCCCC-----CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence            3667664322     2467888899999998877632       247888899999998864


No 84 
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=30.21  E-value=97  Score=21.23  Aligned_cols=51  Identities=10%  Similarity=0.047  Sum_probs=35.7

Q ss_pred             CCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcC----CcceEEecCHHHHHHH
Q 036916           46 GGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLG----MHRALIVSNWEIAKEC  101 (538)
Q Consensus        46 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~----~~~~v~v~dpe~~~~i  101 (538)
                      |...-++|++..-.     ..+.++++..+||+|..+.+.    |.-+|-..+++.++.+
T Consensus        10 ~~~~l~V~~Lp~~~-----te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~   64 (89)
T 3d2w_A           10 HGSKVFVGRCTEDM-----TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL   64 (89)
T ss_dssp             -CCEEEEESCCTTC-----CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCCC-----CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence            33344667765332     245788889999999999875    3456778899998854


No 85 
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=25.72  E-value=1e+02  Score=19.92  Aligned_cols=44  Identities=14%  Similarity=0.072  Sum_probs=31.8

Q ss_pred             chHHHHHHHhhCCeeEEEcCC---------cceEEecCHHHHHHHHhhCCccc
Q 036916           66 HVTLGSIADKHGPIFMIKLGM---------HRALIVSNWEIAKECFTTNDKVF  109 (538)
Q Consensus        66 ~~~~~~~~~~yG~v~~i~~~~---------~~~v~v~dpe~~~~il~~~~~~~  109 (538)
                      .+.++++..+||+|..+.+..         .-+|-..+++.++..+......+
T Consensus        13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~   65 (75)
T 1iqt_A           13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNV   65 (75)
T ss_dssp             HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCB
T ss_pred             HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeE
Confidence            456788888999998887632         33566789999999887643333


No 86 
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=24.19  E-value=1.9e+02  Score=20.37  Aligned_cols=53  Identities=15%  Similarity=0.039  Sum_probs=37.3

Q ss_pred             CccccccccccCCCCc----cchHHHHHHHhhCCeeEEEcC-------CcceEEecCHHHHHHHHhh
Q 036916           49 WPLIGHLHLLGGQKPA----AHVTLGSIADKHGPIFMIKLG-------MHRALIVSNWEIAKECFTT  104 (538)
Q Consensus        49 ~p~~G~~~~~~~~~~~----~~~~~~~~~~~yG~v~~i~~~-------~~~~v~v~dpe~~~~il~~  104 (538)
                      --++|++..-.   ..    ..+.++++..+||+|..+.+.       |.-+|-..+++.++..+..
T Consensus        17 ~l~V~nLp~~~---~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~   80 (105)
T 2nlw_A           17 VIVVDNVPQVG---PDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   80 (105)
T ss_dssp             EEEEESCCCCC---TTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred             EEEEeCCCcch---hhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence            34677776322   11    346688888999999998875       3446777888888888874


No 87 
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=23.63  E-value=1.8e+02  Score=21.00  Aligned_cols=57  Identities=11%  Similarity=0.049  Sum_probs=39.2

Q ss_pred             ccccccccccCCCCccchHHHHHHHhhCCeeEEEcC--CcceEEecCHHHHHHHHhh-CCccccc
Q 036916           50 PLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLG--MHRALIVSNWEIAKECFTT-NDKVFCN  111 (538)
Q Consensus        50 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~--~~~~v~v~dpe~~~~il~~-~~~~~~~  111 (538)
                      -++|++..-.     ..+.++++..+||+|..+.+.  +.-+|-..+++.++..+.. +...+.+
T Consensus        19 l~V~nLp~~~-----t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g   78 (115)
T 3beg_B           19 VVVSGLPPSG-----SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS   78 (115)
T ss_dssp             EEEEECCSSC-----CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred             EEEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence            3567665322     245688889999999988874  3456778899999988874 3334444


No 88 
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=21.74  E-value=1.4e+02  Score=19.14  Aligned_cols=44  Identities=7%  Similarity=-0.013  Sum_probs=31.2

Q ss_pred             chHHHHHHHhhCCeeEEEcCC---------cceEEecCHHHHHHHHhhCCccc
Q 036916           66 HVTLGSIADKHGPIFMIKLGM---------HRALIVSNWEIAKECFTTNDKVF  109 (538)
Q Consensus        66 ~~~~~~~~~~yG~v~~i~~~~---------~~~v~v~dpe~~~~il~~~~~~~  109 (538)
                      .+.++++-.+||+|..+.+..         .-+|-..+++.++..+..++..+
T Consensus        13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~   65 (75)
T 2mss_A           13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEI   65 (75)
T ss_dssp             HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCS
T ss_pred             HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEE
Confidence            456788888999998887642         23466779999998886443333


No 89 
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=21.28  E-value=1.4e+02  Score=21.35  Aligned_cols=68  Identities=16%  Similarity=0.039  Sum_probs=39.0

Q ss_pred             CCCcCccccccccccCCCCccchHHHHHHHhhCCeeEEEcCC----------cceEEecCHHHHHHHHhh-CCcccccC
Q 036916           45 PGGAWPLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLGM----------HRALIVSNWEIAKECFTT-NDKVFCNR  112 (538)
Q Consensus        45 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~~----------~~~v~v~dpe~~~~il~~-~~~~~~~~  112 (538)
                      .|...-+++|+..-.....+..+-+++...+||.|..+++..          .-+|-..+++.+...... ++..|.+|
T Consensus         6 ~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr   84 (105)
T 2pe8_A            6 CPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR   84 (105)
T ss_dssp             SCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred             CCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence            344455666665321111334567777788999998887531          124556788888877754 33444433


No 90 
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.23  E-value=2.4e+02  Score=19.96  Aligned_cols=50  Identities=8%  Similarity=-0.042  Sum_probs=36.7

Q ss_pred             ccccccccccCCCCccchHHHHHHHhhCCeeEEEcC--CcceEEecCHHHHHHHHhh
Q 036916           50 PLIGHLHLLGGQKPAAHVTLGSIADKHGPIFMIKLG--MHRALIVSNWEIAKECFTT  104 (538)
Q Consensus        50 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~v~~i~~~--~~~~v~v~dpe~~~~il~~  104 (538)
                      -++|++..-     -..+.++++..+||+|..+.+.  +.-+|-..+++.++..+..
T Consensus        18 l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~   69 (108)
T 1x4c_A           18 VVVSGLPPS-----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK   69 (108)
T ss_dssp             EEEESCCSS-----CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred             EEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence            356666522     2356788889999999888764  4567778899999998874


Done!