BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036917
(280 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R CPG Q +
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACPGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G I V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 356 GDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 413
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 414 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 467
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACEGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD VW D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD VW D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIEETLTLKPKGFVIKAKSKKIPLGGIPSP 462
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGKQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 353 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 410
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 411 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 464
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 353 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 410
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 411 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 464
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 353 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 410
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 411 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 464
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETQLLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGIPSP 461
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 408
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN-----PGLVTYMKT---PLQAVPTP 266
+ T +LG +L HF + E E+D+ E G V K+ PL +P+P
Sbjct: 409 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSP 462
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQ 214
G+ + N+ +V +D AVW+ P +D +GH + LPF AGRR C G
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 215 LGINLVTSMLGHLLHHFAWAPPEG 238
L + LL HF+++ P G
Sbjct: 426 LARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQ 214
G+ + N+ +V +D AVW+ P +D +GH + LPF AGRR C G
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEP 425
Query: 215 LGINLVTSMLGHLLHHFAWAPPEG 238
L + LL HF+++ P G
Sbjct: 426 LARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ PFG G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PFGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ P+G G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PYGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 27 LPPGPRPLPIVGNL--YDIKPVRFRCFAEWAQQYGQSFR-------------FELAREVL 71
LPPGP PLPI+GN+ D+K + + F +++ YG F +E +E L
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDI-CKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEAL 69
Query: 72 KEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRK--VCTLELFTPKRLEALRPI 129
++ ++ + R S + + ++ G +I ++ G + ++R+ + TL F + ++
Sbjct: 70 IDNGEEFSGRGNSPISQRITK-GLGIISSN-GKRWKEIRRFSLTTLRNFGMGK-RSIEDR 126
Query: 130 REDEVTAMVESIFKDCTDP 148
++E +VE + K P
Sbjct: 127 VQEEAHCLVEELRKTKASP 145
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 161 IHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDM--KGHDFRLLPFGAGRRVCPGAQLGIN 218
+ VN W V DP +W+DP D K +++ FG G+R C G L
Sbjct: 383 VFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKW 442
Query: 219 LVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLV 253
+ L LL ++ P GVK +D++ GL
Sbjct: 443 EIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLT 474
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ P+G G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PWGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ P G G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PHGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 217
G + V + + RD +W D + + H F+ P G G+R C G Q +
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PAGNGQRACIGQQFAL 407
Query: 218 NLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 252
+ T +LG +L HF + E E+D+ E L
Sbjct: 408 HEATLVLGMMLKHFDF---EDHTNYELDIKETLTL 439
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
4- Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
4- Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 27 LPPGPRPLPIVGNLYDIKPVRF-RCFAEWAQQYGQSFRFELARE 69
LPPGP PLPI+GNL+ ++ + F AQ++G F + +
Sbjct: 11 LPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQ 54
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 202 PFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
PF G+RVC G L + +L +L HF P V P++ID+S
Sbjct: 408 PFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL--VDPKDIDLS 451
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 24 RFNLPPGPRPLPIVGNL--YDIKPVRFRCFAEWAQQYGQSFR--FELAR-------EVLK 72
R LPPGP PLP++GN+ DIK V + ++ YG F F L R EV+K
Sbjct: 9 RGKLPPGPTPLPVIGNILQIDIKDVS-KSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVK 67
Query: 73 EHDQQLADRHRSRS---AAKFSRDGKDLIWADYGPHYVKVRKVCTLEL 117
E L + R A+ + G +++++ G + ++R+ + L
Sbjct: 68 EALIDLGEEFSGRGHFPLAERANRGFGIVFSN-GKRWKEIRRFSLMTL 114
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 161 IHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLV 220
+ V ++A+ RDPA + P D D+ FR L FG G R C G ++ +
Sbjct: 376 VQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEM 433
Query: 221 TSMLGHLLHHF 231
T L H+L +F
Sbjct: 434 TLFLIHILENF 444
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 LPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRFEL-AREVLKEHDQQLADRHRS 84
LPPGP PLP++GNL + + R F ++YG F L +R V+
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 85 RSAAKFSRDGK----DLIWADYG 103
A FS GK D I+ YG
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYG 93
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 135 TAMVESIFKDCTDPHNFVAFTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMK 194
T ++ F+ P N F + S +H DP ++ P + +K
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALH--------DPRYFETPNTFNPGHFLDANGALK 402
Query: 195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
++ +PF G+R+C G + + +L +F+ A P V PE+ID++
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 LPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRFEL-AREVLKEHDQQLADRHRS 84
LPPGP PLP++GNL + + R F ++YG F L +R V+
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 85 RSAAKFSRDGK----DLIWADYG 103
A FS GK D I+ YG
Sbjct: 71 DQAEAFSGRGKIAVVDPIFQGYG 93
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 135 TAMVESIFKDCTDPHNFVAFTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMK 194
T ++ F+ P N F + S +H DP ++ P + +K
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALH--------DPRYFETPNTFNPGHFLDANGALK 402
Query: 195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
++ +PF G+R+C G + + +L +F+ A P V PE+ID++
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 27 LPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP++GNL + + R F ++YG F L VL D + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYG 103
D+ A FS GK D I+ YG
Sbjct: 71 DQ-----AEAFSGRGKIAVVDPIFQGYG 93
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 135 TAMVESIFKDCTDPHNFVAFTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMK 194
T ++ F+ P N F + S +H DP ++ P + +K
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALH--------DPRYFETPNTFNPGHFLDANGALK 402
Query: 195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
++ +PF G+R+C G + + +L +F+ A P V PE+ID++
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 27 LPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP++GNL + + R F ++YG F L VL D + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYG 103
D+ A FS GK D I+ YG
Sbjct: 71 DQ-----AEAFSGRGKIAVVDPIFQGYG 93
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 135 TAMVESIFKDCTDPHNFVAFTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMK 194
T ++ F+ P N F + S +H DP ++ P + +K
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALH--------DPRYFETPNTFNPGHFLDANGALK 402
Query: 195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
++ +PF G+R+C G + + +L +F+ A P V PE+ID++
Sbjct: 403 RNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 27 LPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP++GNL + + R F ++YG F L VL D + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYG 103
D+ A FS GK D I+ YG
Sbjct: 71 DQ-----AEAFSGRGKIAVVDPIFQGYG 93
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 135 TAMVESIFKDCTDPHNFVAFTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMK 194
T ++ F+ P N F + S +H DP ++ P + +K
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALH--------DPRYFETPNTFNPGHFLDANGALK 402
Query: 195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
++ +PF G+R+C G + + +L +F+ A P V PE+ID++
Sbjct: 403 RNE-GFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLT 452
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDM-KGHDFRLLPFGAGRRVCPGAQLG 216
G + VN W + D +W +P D + K +++ FG G+R C G +
Sbjct: 377 GRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIA 436
Query: 217 INLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLV 253
V L LL ++ P GVK +DM+ GL
Sbjct: 437 RWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGLT 470
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
Query: 28 PPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRFELA-------------REVLKEH 74
PPGP P++GN + FA A++YG F+ L + L +
Sbjct: 11 PPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQ 70
Query: 75 DQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRK 111
ADR S ++ + G+ + + Y H+ R+
Sbjct: 71 GSAFADR-PSFASFRVVSGGRSMAFGHYSEHWKVQRR 106
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 136 AMVESIFKDCTDPHNFVAFTL-------SGSNIHVNVWAVARDPAVWKDPLXXXXXXXXX 188
AM S F T PH A T + + VN W+V DP W +P
Sbjct: 348 AMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLD 407
Query: 189 XD-VDMKGHDFRLLPFGAGRRVCPGAQLG---INLVTSMLGH 226
D + K R++ F G+R C G +L + L S+L H
Sbjct: 408 KDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAH 449
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 27 LPPGPRPLPIVGNLYDIKPVR-FRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP +GN + + + + +++YG F L VL HD + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYGPHYVKVRKVCTLELFTPKRLEAL 126
D+ A +FS G+ D ++ YG + + L F+ L
Sbjct: 71 DQ-----AEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGF 116
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 27 LPPGPRPLPIVGNLYDIKPVR-FRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP +GN + + + + +++YG F L VL HD + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYGPHYVKVRKVCTLELFT 119
D+ A +FS G+ D ++ YG + + L F+
Sbjct: 71 DQ-----AEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFS 109
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 27 LPPGPRPLPIVGNLYDIKPVR-FRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP +GN + + + + +++YG F L VL HD + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYGPHYVKVRKVCTLELFT 119
D+ A +FS G+ D ++ YG + + L F+
Sbjct: 71 DQ-----AEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFS 109
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 27 LPPGPRPLPIVGNLYDIKPVR-FRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP +GN + + + + +++YG F L VL HD + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYGPHYVKVRKVCTLELFT 119
D+ A +FS G+ D ++ YG + + L F+
Sbjct: 71 DQ-----AEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFS 109
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 27 LPPGPRPLPIVGNLYDIKPVR-FRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP +GN + + + + +++YG F L VL HD + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYGPHYVKVRKVCTLELFT 119
D+ A +FS G+ D ++ YG + + L F+
Sbjct: 71 DQ-----AEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFS 109
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 27 LPPGPRPLPIVGNLYDIKPVR-FRCFAEWAQQYGQSFRFELARE---VLKEHD---QQLA 79
LPPGP PLP +GN + + + + +++YG F L VL HD + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 80 DRHRSRSAAKFSRDGK----DLIWADYGPHYVKVRKVCTLELFT 119
D+ A +FS G+ D ++ YG + + L F+
Sbjct: 71 DQ-----AEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFS 109
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 27 LPPGPRPLPIVGNLYDIKPVRF-RCFAEWAQQYGQSFR-------------FELAREVLK 72
LPPGP P PI+GN+ I + ++++ YG F +E +E L
Sbjct: 11 LPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALV 70
Query: 73 EHDQQLADR 81
+ ++ A R
Sbjct: 71 DLGEEFAGR 79
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 154 FTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGA 213
F G++I ++ +V D + +P + K D+ +PF AG+R+C G
Sbjct: 359 FIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGE 417
Query: 214 QLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
L + L +L +F V+P+++D++
Sbjct: 418 GLARMELFLFLTSILQNFKLQ--SLVEPKDLDIT 449
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 154 FTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGA 213
F G + + +A+ RDP W +P + D + PFG+G R C G
Sbjct: 367 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGM 425
Query: 214 QLGINLVTSMLGHLLHHFAWAP 235
+ + + L +L +F++ P
Sbjct: 426 RFALMNMKLALIRVLQNFSFKP 447
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 154 FTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGA 213
F G + + +A+ RDP W +P + D + PFG+G R C G
Sbjct: 366 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGM 424
Query: 214 QLGINLVTSMLGHLLHHFAWAP 235
+ + + L +L +F++ P
Sbjct: 425 RFALMNMKLALIRVLQNFSFKP 446
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 154 FTLSGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGA 213
F G + + +A+ RDP W +P + D + PFG+G R C G
Sbjct: 365 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGM 423
Query: 214 QLGINLVTSMLGHLLHHFAWAP 235
+ + + L +L +F++ P
Sbjct: 424 RFALMNMKLALIRVLQNFSFKP 445
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 200 LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 247
+PF G+R+C G + + +L +F+ A P V PE+ID++
Sbjct: 407 FIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP--VAPEDIDLT 452
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 24 RFNLPPGPRPLPIVGNLYD--IKPVRFRCFAEWAQQYGQSFR-------------FELAR 68
R LPPGP PLP++GN+ IK + + ++ YG F +E +
Sbjct: 9 RGKLPPGPTPLPVIGNILQIGIKDIS-KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVK 67
Query: 69 EVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLEL 117
E L + ++ + R A + +R G +++++ G + ++R+ + L
Sbjct: 68 EALIDLGEEFSGRGIFPLAERANR-GFGIVFSN-GKKWKEIRRFSLMTL 114
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 171 DPAVWKDPLXXXXXXXXXXDVDMKGH--------DFRLLPFGAGRRVCPGAQLGINLVTS 222
DP ++ DPL + K + +PFG+G +CPG I+ +
Sbjct: 380 DPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQ 439
Query: 223 MLGHLLHHFAWAPPEG 238
L +L +F EG
Sbjct: 440 FLILMLSYFELELIEG 455
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 171 DPAVWKDPLXXXXXXXXXXDVDMKGH--------DFRLLPFGAGRRVCPGAQLGINLVTS 222
DP ++ DPL + K + +PFG+G +CPG I+ +
Sbjct: 380 DPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQ 439
Query: 223 MLGHLLHHFAWAPPEG 238
L +L +F EG
Sbjct: 440 FLILMLSYFELELIEG 455
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGR----RVCPGA 213
G+++ ++++ DP +W P + ++ F ++P G G CPG
Sbjct: 311 GTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENL----FDMIPQGGGHAEKGHRCPGE 366
Query: 214 QLGINLVTSMLGHLLHHFAWAPPE 237
+ I ++ + L L+H + PE
Sbjct: 367 GITIEVMKASLDFLVHQIEYDVPE 390
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 201 LPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW---APPEGVKPEEIDM 246
+PFGAGR C GA I + ++ LL + + PPE + + M
Sbjct: 385 IPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 201 LPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWA---PPEGVKPEEIDM 246
+PFGAGR C GA I + ++ LL + + PPE + + M
Sbjct: 385 IPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 201 LPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW---APPEGVKPEEIDM 246
+PFGAGR C GA I + ++ LL + + PPE + + M
Sbjct: 385 IPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 201 LPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW---APPEGVKPEEIDM 246
+PFGAGR C GA I + ++ LL + + PPE + + M
Sbjct: 385 IPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQ 214
G+ + N+++V D W+DP +D G+ + L+PF GRR C G
Sbjct: 371 GTTVITNLYSVHFDEKYWRDP----EVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 426
Query: 215 LGINLVTSMLGHLLHHFAWAPPEGVKPE 242
L + LL F P + P+
Sbjct: 427 LARMEMFLFFTALLQRFHLHFPHELVPD 454
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQ 214
G+ + N+++V D W+DP +D G+ + L+PF GRR C G
Sbjct: 371 GTTVITNLYSVHFDEKYWRDP----EVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEH 426
Query: 215 LGINLVTSMLGHLLHHFAWAPPEGVKPE 242
L + LL F P + P+
Sbjct: 427 LARMEMFLFFTALLQRFHLHFPHELVPD 454
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Query: 28 PPGPRPLPIVGNLYD--IKPVRFRCFAEWAQQYGQSFR-------------FELAREVLK 72
PPGP PLP++GN+ IK + + ++ YG F +E +E L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDIS-KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 69
Query: 73 EHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLEL 117
+ ++ + R A + +R G +++++ G + ++R+ + L
Sbjct: 70 DLGEEFSGRGIFPLAERANR-GFGIVFSN-GKKWKEIRRFSLMTL 112
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 202 PFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEI----DMSENPGLVTYMK 257
PFG G R C G + + ++ ++L LL F +G E I D+S +P K
Sbjct: 429 PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPD---ETK 485
Query: 258 TPLQAVPTPR 267
L+ + TPR
Sbjct: 486 NMLEMIFTPR 495
>pdb|1DQ3|A Chain A, Crystal Structure Of An Archaeal Intein-Encoded Homing
Endonuclease Pi-Pfui
Length = 454
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 45 PVRFRCFAEWAQQYGQSFRFELAREVLKEHDQQLA 79
P+ F F EWA +YG F+ ++ + +D++++
Sbjct: 341 PLNFNAFKEWASEYGVEFKTNGSQTIAIINDERIS 375
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 158 GSNIHVNVWAVARDPAVWKDPLXXXXXXXXX-XDVDMKGHDFRLLPFGAGRRVCPGAQLG 216
G+ + +N+WA+ + W P + LPFGAG R C G L
Sbjct: 371 GTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILA 430
Query: 217 INLVTSMLGHLLHHFAWAPPE 237
+ ++ LL F P+
Sbjct: 431 RQELFLIMAWLLQRFDLEVPD 451
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 157 SGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPG 212
+G+ + V ++++ R+ A++ P D+ G +F +PFG G R C G
Sbjct: 373 AGTLVQVFLYSLGRNAALFPRP--ERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 29 PGPRPLPIVGNLYDI-----KPVRFRCFAEWAQQYGQSFRFELA 67
PGP P++G+L +I + AE+ ++YGQ FR +L
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLG 70
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 201 LPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPP 236
L FG G RVC G L + +L LL F PP
Sbjct: 418 LAFGCGARVCLGESLARLELFVVLARLLQAFTLLPP 453
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 104 PHYVKVRKVCTLELFTPKRLEALRPIREDEVTA 136
P + ++RK+ + E FT +R+EA+RP R +++TA
Sbjct: 95 PTHTRLRKLVSQE-FTVRRVEAMRP-RVEQITA 125
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 104 PHYVKVRKVCTLELFTPKRLEALRPIREDEVTA 136
P + ++RK+ + E FT +R+EA+RP R +++TA
Sbjct: 96 PTHTRLRKLVSQE-FTVRRVEAMRP-RVEQITA 126
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 27.3 bits (59), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 104 PHYVKVRKVCTLELFTPKRLEALRPIREDEVTA 136
P + ++RK+ + E FT +R+EA+RP R +++TA
Sbjct: 95 PTHTRLRKLVSQE-FTVRRVEAMRP-RVEQITA 125
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 104 PHYVKVRKVCTLELFTPKRLEALRPIREDEVTA 136
P + ++RK+ + E FT +R+EA+RP R +++TA
Sbjct: 96 PTHTRLRKLVSQE-FTVRRVEAMRP-RVEQITA 126
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 104 PHYVKVRKVCTLELFTPKRLEALRPIREDEVTA 136
P + ++RK+ + E FT +R+EA+RP R +++TA
Sbjct: 96 PTHTRLRKLVSQE-FTVRRVEAMRP-RVEQITA 126
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 104 PHYVKVRKVCTLELFTPKRLEALRPIREDEVTA 136
P + ++RK+ + E FT +R+EA+RP R +++TA
Sbjct: 95 PTHTRLRKLVSQE-FTVRRVEAMRP-RVEQITA 125
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,577,760
Number of Sequences: 62578
Number of extensions: 346226
Number of successful extensions: 924
Number of sequences better than 100.0: 96
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 823
Number of HSP's gapped (non-prelim): 122
length of query: 280
length of database: 14,973,337
effective HSP length: 98
effective length of query: 182
effective length of database: 8,840,693
effective search space: 1609006126
effective search space used: 1609006126
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)