Query         036917
Match_columns 280
No_of_seqs    141 out of 1553
Neff          10.5
Searched_HMMs 46136
Date          Fri Mar 29 06:41:02 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036917.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036917hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.2E-48   7E-53  336.7  20.4  239   24-268    24-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 1.1E-42 2.4E-47  298.7  20.0  238   26-268    31-499 (499)
  3 PLN02687 flavonoid 3'-monooxyg 100.0 2.4E-42 5.2E-47  307.7  22.1  244   25-268    33-509 (517)
  4 PLN02183 ferulate 5-hydroxylas 100.0 3.7E-42 7.9E-47  306.4  22.1  261    9-270    19-514 (516)
  5 PLN03234 cytochrome P450 83B1; 100.0   5E-42 1.1E-46  304.8  22.6  256   12-267    14-498 (499)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 7.4E-42 1.6E-46  303.2  22.5  249   17-268    22-497 (504)
  7 PLN03112 cytochrome P450 famil 100.0 1.4E-41 3.1E-46  302.9  22.6  252   23-274    29-514 (514)
  8 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-41 2.7E-46  304.3  21.6  247   24-273    55-539 (543)
  9 PLN02394 trans-cinnamate 4-mon 100.0 3.4E-41 7.4E-46  299.8  22.9  249   18-268    22-502 (503)
 10 PLN00168 Cytochrome P450; Prov 100.0 9.4E-41   2E-45  297.6  20.2  243   24-269    33-518 (519)
 11 PLN02966 cytochrome P450 83A1  100.0 4.6E-40   1E-44  292.1  22.9  255   12-268    15-498 (502)
 12 PTZ00404 cytochrome P450; Prov 100.0 1.8E-40   4E-45  293.6  18.7  236   20-267    23-482 (482)
 13 PLN02290 cytokinin trans-hydro 100.0 3.6E-39 7.8E-44  287.6  17.8  235   24-269    40-516 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 4.6E-39   1E-43  283.3  17.7  237   28-269     1-465 (466)
 15 PLN02774 brassinosteroid-6-oxi 100.0 2.6E-38 5.7E-43  278.2  18.2  229   22-266    27-462 (463)
 16 PLN02500 cytochrome P450 90B1  100.0 3.1E-38 6.6E-43  279.8  17.1  232   22-266    34-488 (490)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 1.5E-37 3.2E-42  274.2  17.2  236   24-269    33-497 (497)
 18 PLN02196 abscisic acid 8'-hydr 100.0 4.4E-37 9.5E-42  270.4  17.2  226   23-266    32-461 (463)
 19 PLN03018 homomethionine N-hydr 100.0 2.9E-36 6.3E-41  268.4  22.2  114  156-272   410-528 (534)
 20 PF00067 p450:  Cytochrome P450 100.0 5.5E-38 1.2E-42  275.7   8.1  230   28-264     1-463 (463)
 21 PLN03141 3-epi-6-deoxocathaste 100.0 1.2E-36 2.5E-41  267.2  16.3  102  156-269   350-451 (452)
 22 PLN02987 Cytochrome P450, fami 100.0   2E-36 4.4E-41  265.9  17.5  105  156-268   365-469 (472)
 23 PLN02302 ent-kaurenoic acid ox 100.0 6.6E-36 1.4E-40  265.3  19.5  230   23-269    39-489 (490)
 24 PLN02169 fatty acid (omega-1)- 100.0 1.3E-35 2.9E-40  262.8  18.3  107  156-267   391-499 (500)
 25 KOG0684 Cytochrome P450 [Secon 100.0 1.8E-35 3.8E-40  244.5  14.8  109  156-268   373-485 (486)
 26 KOG0159 Cytochrome P450 CYP11/ 100.0 3.1E-35 6.6E-40  248.4  16.4  234   28-269    52-519 (519)
 27 PLN03195 fatty acid omega-hydr 100.0 7.9E-35 1.7E-39  259.6  17.3  108  156-268   408-516 (516)
 28 PLN02738 carotene beta-ring hy 100.0 7.9E-34 1.7E-38  256.0  17.5  226   37-270   142-597 (633)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.3E-33 2.9E-38  249.8  16.4  109  156-269   373-483 (489)
 30 PLN02426 cytochrome P450, fami 100.0 8.1E-31 1.7E-35  232.2  18.1  111  156-269   390-501 (502)
 31 PLN02648 allene oxide synthase 100.0 8.8E-29 1.9E-33  216.8  12.0   83  156-238   373-462 (480)
 32 COG2124 CypX Cytochrome P450 [  99.9 2.3E-24 4.9E-29  186.5  14.6   96  156-267   315-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  64.4       5 0.00011   24.3   1.5    9  181-189    43-51  (59)
 34 PF05393 Hum_adeno_E3A:  Human   52.5      19 0.00041   23.6   2.7    8   31-38     64-71  (94)
 35 PF09201 SRX:  SRX;  InterPro:   50.5      16 0.00036   26.3   2.4   21  209-229    19-39  (148)
 36 PHA02902 putative IMV membrane  47.5      46   0.001   20.4   3.7   11   29-40     33-43  (70)
 37 KOG3506 40S ribosomal protein   37.6      16 0.00035   21.6   0.7   11  201-211    12-22  (56)
 38 PF15050 SCIMP:  SCIMP protein   35.2      66  0.0014   22.6   3.4   17   25-41     67-84  (133)
 39 PF05084 GRA6:  Granule antigen  32.9      76  0.0016   23.6   3.6   19   15-33    166-184 (215)
 40 PF12444 Sox_N:  Sox developmen  27.9      42 0.00092   22.0   1.5   21  218-238    60-80  (84)
 41 PF05568 ASFV_J13L:  African sw  27.5      44 0.00096   24.3   1.7   14   10-23     42-55  (189)
 42 PF02663 FmdE:  FmdE, Molybdenu  27.0      57  0.0012   23.3   2.3   20  208-227     5-24  (131)
 43 COG2101 SPT15 TATA-box binding  23.7      23 0.00051   26.7  -0.3   35  179-213    35-69  (185)
 44 PF06129 Chordopox_G3:  Chordop  21.7      89  0.0019   21.7   2.2   21    1-21      1-21  (109)
 45 PF15442 DUF4629:  Domain of un  21.3      42 0.00092   24.6   0.7   10  206-215   127-136 (150)
 46 KOG3302 TATA-box binding prote  20.1      26 0.00057   26.9  -0.6   36  177-212    48-83  (200)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.2e-48  Score=336.68  Aligned_cols=239  Identities=42%  Similarity=0.804  Sum_probs=207.3

Q ss_pred             CCCCCCCCCCCCccccccCCCCc-hhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCC-ccccc
Q 036917           24 RFNLPPGPRPLPIVGNLYDIKPV-RFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHR-SRSAA   88 (280)
Q Consensus        24 ~~~~pPgP~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~-~~~~~   88 (280)
                      +.++||||.+||+|||++++... +|+.+.+|+++|||||++             +.++|++++++..|++||. .....
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            37999999999999999999776 999999999999999987             9999999999999999997 23447


Q ss_pred             cccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCC-CCeee--------------ee
Q 036917           89 KFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCT-DPHNF--------------VA  153 (280)
Q Consensus        89 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~~--------------~~  153 (280)
                      .+..++.+++++.||+.|+.+||++...+++.+.++.......++++.+++.+.+... ..+++              +.
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHH
Confidence            7777778999999999999999999999999999999988889999999999986111 34444              11


Q ss_pred             ec------------------------------------------------------------------------------
Q 036917          154 FT------------------------------------------------------------------------------  155 (280)
Q Consensus       154 ~~------------------------------------------------------------------------------  155 (280)
                      ++                                                                              
T Consensus       184 fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~  263 (489)
T KOG0156|consen  184 FGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEG  263 (489)
T ss_pred             hCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence            11                                                                              


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~  343 (489)
T KOG0156|consen  264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLP  343 (489)
T ss_pred             CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhc
Confidence                                                                                            


Q ss_pred             --------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCC
Q 036917          156 --------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHD  197 (280)
Q Consensus       156 --------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~  197 (280)
                                                            ||||.|+++.|++|+||.+|+||++|+||||++++ +.+...
T Consensus       344 ~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~  422 (489)
T KOG0156|consen  344 KLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLD  422 (489)
T ss_pred             cCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCc
Confidence                                                  99999999999999999999999999999999985 222356


Q ss_pred             CccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          198 FRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       198 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                      ..++|||.|+|.|||..+|++++.+++++|+++|+|+++++    +++.++.. +++.+..|+.....+|.
T Consensus       423 ~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  423 FKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             eEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCcceeeeecCC
Confidence            68999999999999999999999999999999999999977    44555554 66777789999888874


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-42  Score=298.68  Aligned_cols=238  Identities=24%  Similarity=0.364  Sum_probs=186.1

Q ss_pred             CCCCCCCCCCccccccCCC--C-chhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCcccccc
Q 036917           26 NLPPGPRPLPIVGNLYDIK--P-VRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAAK   89 (280)
Q Consensus        26 ~~pPgP~~~p~lG~~~~~~--~-~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~~   89 (280)
                      +-.|||+++|++||+..+.  + ........|.++ |+++.+             +++++|+++++++|.+|......+.
T Consensus        31 rGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~-~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~  109 (499)
T KOG0158|consen   31 RGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKY-RPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP  109 (499)
T ss_pred             CCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcC-CCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence            3458999999999999883  2 233334444444 998887             9999999999999999641111111


Q ss_pred             ccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCCC--Ceee--------------ee
Q 036917           90 FSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCTD--PHNF--------------VA  153 (280)
Q Consensus        90 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~--~~~~--------------~~  153 (280)
                      -......-++...|++||++|..++ +.|++++++.+.+.+++++.++++.+.+....  .+++              +.
T Consensus       110 ~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~A  188 (499)
T KOG0158|consen  110 EDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCA  188 (499)
T ss_pred             CCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhh
Confidence            1112223345556999999999999 99999999999999999999999999886442  2221              11


Q ss_pred             ec------------------------------------------------------------------------------
Q 036917          154 FT------------------------------------------------------------------------------  155 (280)
Q Consensus       154 ~~------------------------------------------------------------------------------  155 (280)
                      ++                                                                              
T Consensus       189 fG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~~~r~D  268 (499)
T KOG0158|consen  189 FGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKENIERND  268 (499)
T ss_pred             cccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence            11                                                                              


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       269 fi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd  348 (499)
T KOG0158|consen  269 FIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYD  348 (499)
T ss_pred             HHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHH
Confidence                                                                                            


Q ss_pred             -----------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCC
Q 036917          156 -----------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMK  194 (280)
Q Consensus       156 -----------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~  194 (280)
                                                               +||+.|.+++|++|+||++||||++|+||||.+++.+ .
T Consensus       349 ~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~  427 (499)
T KOG0158|consen  349 SLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-S  427 (499)
T ss_pred             HHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-c
Confidence                                                     8999999999999999999999999999999987765 3


Q ss_pred             CCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       195 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                      ..+..|+|||.|||.|+|++||.+|+|++|+.||++|+++.... +..+ ......++++.|.+++.+++++|+
T Consensus       428 ~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  428 RHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TIIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-ccCc-ccCCccceeeecCCceEEEEEeCC
Confidence            36679999999999999999999999999999999999998874 2222 222223778889899999999985


No 3  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.4e-42  Score=307.65  Aligned_cols=244  Identities=40%  Similarity=0.815  Sum_probs=195.5

Q ss_pred             CCCCCCCCCCCccccccCCCCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCcccccccc
Q 036917           25 FNLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAAKFS   91 (280)
Q Consensus        25 ~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~~~~   91 (280)
                      .++||||.++|++||++++..+++..+.+|+++||++|++             +.+++++.++...|.+++.......+.
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~  112 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMA  112 (517)
T ss_pred             CCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhc
Confidence            3689999999999999998778999999999999999886             999999998888898887654444444


Q ss_pred             CCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhc-CCCCeee------ee--------ec-
Q 036917           92 RDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKD-CTDPHNF------VA--------FT-  155 (280)
Q Consensus        92 ~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~~~~------~~--------~~-  155 (280)
                      ..+.+++++.+|+.|+++|+++.+++|+..+++.+.+.+++++.++++.+.+. .++.+++      .+        ++ 
T Consensus       113 ~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  192 (517)
T PLN02687        113 YNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGR  192 (517)
T ss_pred             cCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCc
Confidence            33346677777999999999998678999999999998888888888877542 1122222      00        00 


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d  272 (517)
T PLN02687        193 RVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKD  272 (517)
T ss_pred             cccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       273 ~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  352 (517)
T PLN02687        273 LLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESD  352 (517)
T ss_pred             HHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHH
Confidence                                                                                            


Q ss_pred             ----------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcC---
Q 036917          156 ----------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVD---  192 (280)
Q Consensus       156 ----------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~---  192 (280)
                                                              |+||.|.++.|++|+||++|+||++|+||||++++..   
T Consensus       353 l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~  432 (517)
T PLN02687        353 LPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGV  432 (517)
T ss_pred             hhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCcccc
Confidence                                                    9999999999999999999999999999999975422   


Q ss_pred             -CCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          193 -MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       193 -~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                       .+..++.++|||.|+|.|+|++||++|+++++|.|+++|+|++.++....++......++++.+..++.++++||+
T Consensus       433 ~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        433 DVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             ccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence             1224558999999999999999999999999999999999999876422234333345666667789999999995


No 4  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.7e-42  Score=306.41  Aligned_cols=261  Identities=39%  Similarity=0.742  Sum_probs=187.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcC
Q 036917            9 SIIFIILAYKLYQRLRFNLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHD   75 (280)
Q Consensus         9 l~~~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~   75 (280)
                      +.+++++.+..+.+++.++||||.++|++||++++....+..+.+|+++||++|++             +.+++++.+++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~   98 (516)
T PLN02183         19 ISLFLFLGLISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQD   98 (516)
T ss_pred             HHHHHHHHHHhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhh
Confidence            34444444455566677899999999999999888666778999999999999987             89999999888


Q ss_pred             CCCCCCCCccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCCC--------
Q 036917           76 QQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCTD--------  147 (280)
Q Consensus        76 ~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~--------  147 (280)
                      ..|..++.......+..+..+.+++.+|+.|+++|+++..++|+.+.++.+.+.+ ++++.+++.+....++        
T Consensus        99 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~  177 (516)
T PLN02183         99 SVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELI  177 (516)
T ss_pred             hhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHH
Confidence            8888887544333333222355677779999999999644778776665544322 1222222222100000        


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          148 --------------------------------------------------------------------------------  147 (280)
Q Consensus       148 --------------------------------------------------------------------------------  147 (280)
                                                                                                      
T Consensus       178 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  257 (516)
T PLN02183        178 FTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQK  257 (516)
T ss_pred             HHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                                                                                            


Q ss_pred             -------------Ceee----e-------------------eec------------------------------------
Q 036917          148 -------------PHNF----V-------------------AFT------------------------------------  155 (280)
Q Consensus       148 -------------~~~~----~-------------------~~~------------------------------------  155 (280)
                                   .-++    +                   .++                                    
T Consensus       258 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pev  337 (516)
T PLN02183        258 RKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPED  337 (516)
T ss_pred             hcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHH
Confidence                         0000    0                   011                                    


Q ss_pred             -------------------------------------------------------------CCcceEEEeeehhccCCCC
Q 036917          156 -------------------------------------------------------------LSGSNIHVNVWAVARDPAV  174 (280)
Q Consensus       156 -------------------------------------------------------------pkgt~v~~~~~~~~~d~~~  174 (280)
                                                                                   ||||.|.++.|++|+||++
T Consensus       338 q~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~  417 (516)
T PLN02183        338 LKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNS  417 (516)
T ss_pred             HHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccc
Confidence                                                                         9999999999999999999


Q ss_pred             CCCCCCCCCCcccccCcCC-CCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCcc
Q 036917          175 WKDPLEFRPERFFEEDVDM-KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLV  253 (280)
Q Consensus       175 ~~~~~~F~peR~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  253 (280)
                      |+||++|+||||++++... ....+.++|||+|+|.|+|++||++|+++++|.++++|+|++.++....++.....++.+
T Consensus       418 ~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  497 (516)
T PLN02183        418 WEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLT  497 (516)
T ss_pred             cCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccc
Confidence            9999999999999755422 234568999999999999999999999999999999999999876422223333334555


Q ss_pred             ccccCCceEeeeecCCC
Q 036917          254 TYMKTPLQAVPTPRLPS  270 (280)
Q Consensus       254 ~~~~~~~~~~~~~R~~~  270 (280)
                      ..+..++.+.+++|..+
T Consensus       498 ~~~~~~~~~~~~~r~~~  514 (516)
T PLN02183        498 APRATRLVAVPTYRLQC  514 (516)
T ss_pred             cccCCCcEEEeecCCCC
Confidence            55667899999999554


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5e-42  Score=304.84  Aligned_cols=256  Identities=38%  Similarity=0.736  Sum_probs=198.2

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCccccccCCCC-chhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCC
Q 036917           12 FIILAYKLYQRLRFNLPPGPRPLPIVGNLYDIKP-VRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQ   77 (280)
Q Consensus        12 ~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~~~-~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~   77 (280)
                      +++++++...+++.+.||||.++|++||++++.. +++.++.+++++||++|++             +.+++++.++...
T Consensus        14 ~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~   93 (499)
T PLN03234         14 AAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLN   93 (499)
T ss_pred             HHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCcc
Confidence            3334444444556688999999999999999954 7888999999999999876             9999999988888


Q ss_pred             CCCCCCccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcC--CCCeee----
Q 036917           78 LADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDC--TDPHNF----  151 (280)
Q Consensus        78 f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~----  151 (280)
                      |..++.......+...+..+.+..+++.|+.+|+.+..++|++.+++.+.+.++++++++++.+.+..  ++.+++    
T Consensus        94 f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~  173 (499)
T PLN03234         94 FTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELL  173 (499)
T ss_pred             ccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHH
Confidence            88887543333322222344455668899999998655899999999999999999999999886432  222322    


Q ss_pred             ----------eeec------------------------------------------------------------------
Q 036917          152 ----------VAFT------------------------------------------------------------------  155 (280)
Q Consensus       152 ----------~~~~------------------------------------------------------------------  155 (280)
                                ..++                                                                  
T Consensus       174 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~  253 (499)
T PLN03234        174 LSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDE  253 (499)
T ss_pred             HHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence                      0000                                                                  


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       254 ~~~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~  333 (499)
T PLN03234        254 TLDPNRPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVI  333 (499)
T ss_pred             HHhhcccCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence                                                                                            


Q ss_pred             --------------------------------------------------CCcceEEEeeehhccCCCCC-CCCCCCCCC
Q 036917          156 --------------------------------------------------LSGSNIHVNVWAVARDPAVW-KDPLEFRPE  184 (280)
Q Consensus       156 --------------------------------------------------pkgt~v~~~~~~~~~d~~~~-~~~~~F~pe  184 (280)
                                                                        ||||.|.++.|++|+||++| +||++|+||
T Consensus       334 ~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~Pe  413 (499)
T PLN03234        334 GDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE  413 (499)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCch
Confidence                                                              99999999999999999999 899999999


Q ss_pred             cccccCcC--CCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceE
Q 036917          185 RFFEEDVD--MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQA  262 (280)
Q Consensus       185 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (280)
                      ||++++..  .+..++.++|||.|+|.|+|+++|++|+++++|.++++|+|++.++..+..+..+...++...+...+.+
T Consensus       414 R~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (499)
T PLN03234        414 RFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVL  493 (499)
T ss_pred             hhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEE
Confidence            99976433  2334668999999999999999999999999999999999999877433344555556777767667777


Q ss_pred             eeeec
Q 036917          263 VPTPR  267 (280)
Q Consensus       263 ~~~~R  267 (280)
                      ..+.|
T Consensus       494 ~~~~~  498 (499)
T PLN03234        494 APTKH  498 (499)
T ss_pred             EeecC
Confidence            66554


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=7.4e-42  Score=303.16  Aligned_cols=249  Identities=38%  Similarity=0.734  Sum_probs=196.7

Q ss_pred             HHHHhcCCCCCCCCCCCCCccccccCCCCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCC
Q 036917           17 YKLYQRLRFNLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHR   83 (280)
Q Consensus        17 ~~~~~~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~   83 (280)
                      ..++.+.+.++||||.++|++||++.+...++.++.+|+++||+|+++             +.+++++.++.+.|.+++.
T Consensus        22 ~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~  101 (504)
T PLN00110         22 RSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPP  101 (504)
T ss_pred             HHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            344556677899999999999999888777899999999999999887             9999999988888888875


Q ss_pred             ccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcC--CCCeee----------
Q 036917           84 SRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDC--TDPHNF----------  151 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~----------  151 (280)
                      .........+..+.+++.+|+.|+++|+++++.+|+..+++.+.+.+.+++..+++.+.+..  +..+++          
T Consensus       102 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  181 (504)
T PLN00110        102 NAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMAN  181 (504)
T ss_pred             ccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHH
Confidence            44322222222345666779999999999985689999999888887777777777664421  121221          


Q ss_pred             ----e-----eec-------------------------------------------------------------------
Q 036917          152 ----V-----AFT-------------------------------------------------------------------  155 (280)
Q Consensus       152 ----~-----~~~-------------------------------------------------------------------  155 (280)
                          .     .++                                                                   
T Consensus       182 vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  261 (504)
T PLN00110        182 MIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH  261 (504)
T ss_pred             HHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence                0     000                                                                   


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       262 ~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~  341 (504)
T PLN00110        262 ERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLV  341 (504)
T ss_pred             ccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence                                                                                            


Q ss_pred             -------------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcC
Q 036917          156 -------------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVD  192 (280)
Q Consensus       156 -------------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~  192 (280)
                                                                 ||||.|.++.|++|+||++|+||++|+||||++++..
T Consensus       342 ~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~  421 (504)
T PLN00110        342 ESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNA  421 (504)
T ss_pred             HHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCc
Confidence                                                       9999999999999999999999999999999965432


Q ss_pred             C---CCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          193 M---KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       193 ~---~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                      .   +.+.+.++|||.|+|.|+|++||++|+++++|.|+++|+|++.++   .+++.....++++.+..++.+++++|+
T Consensus       422 ~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        422 KIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDG---VELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             ccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCC---CccCcccccccccccCCCceEeeccCC
Confidence            1   112357999999999999999999999999999999999999876   344444445778888899999999996


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.4e-41  Score=302.86  Aligned_cols=252  Identities=37%  Similarity=0.759  Sum_probs=196.4

Q ss_pred             CCCCCCCCCCCCCccccccCCCCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCcccccc
Q 036917           23 LRFNLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAAK   89 (280)
Q Consensus        23 ~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~~   89 (280)
                      ...+.||||.++|++||++++..+++..+.+|+++||++|++             +.+++++.+++..|.+++.......
T Consensus        29 ~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~  108 (514)
T PLN03112         29 KSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVH  108 (514)
T ss_pred             CCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccccee
Confidence            344788999999999999998777899999999999999865             9999999988888988775433222


Q ss_pred             ccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcC--CCCeee--------------ee
Q 036917           90 FSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDC--TDPHNF--------------VA  153 (280)
Q Consensus        90 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~--------------~~  153 (280)
                      ...+...++++.+|+.|+.+|+++.+++|+..+++.+.+.+.++++.+++.+.+..  +..+++              ..
T Consensus       109 ~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  188 (514)
T PLN03112        109 LAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRML  188 (514)
T ss_pred             eccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHH
Confidence            12222244566679999999999765789999999988888888888877654321  111111              00


Q ss_pred             ----e--------c------------------------------------------------------------------
Q 036917          154 ----F--------T------------------------------------------------------------------  155 (280)
Q Consensus       154 ----~--------~------------------------------------------------------------------  155 (280)
                          +        .                                                                  
T Consensus       189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  268 (514)
T PLN03112        189 LGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKL  268 (514)
T ss_pred             cCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence                0        0                                                                  


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       269 ~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t  348 (514)
T PLN03112        269 PGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQ  348 (514)
T ss_pred             cCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCC
Confidence                                                                                            


Q ss_pred             -------------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcC
Q 036917          156 -------------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVD  192 (280)
Q Consensus       156 -------------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~  192 (280)
                                                                 ||||.|.++.|++|+||++|+||++|+||||..+++.
T Consensus       349 ~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~  428 (514)
T PLN03112        349 ESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGS  428 (514)
T ss_pred             hhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCC
Confidence                                                       9999999999999999999999999999997654321


Q ss_pred             ---C-CCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          193 ---M-KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       193 ---~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                         . ....+.++|||.|+|.|+|++||++|++++++.++++|+|++.++....++......++.+++.+++.+.++||+
T Consensus       429 ~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        429 RVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             ccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence               1 123457999999999999999999999999999999999998866322234444445677777889999999999


Q ss_pred             CCcchh
Q 036917          269 PSHLYK  274 (280)
Q Consensus       269 ~~~~~~  274 (280)
                      .-++|+
T Consensus       509 ~~~~~~  514 (514)
T PLN03112        509 APHLYG  514 (514)
T ss_pred             cccccC
Confidence            888875


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.2e-41  Score=304.31  Aligned_cols=247  Identities=28%  Similarity=0.549  Sum_probs=191.8

Q ss_pred             CCCCCCCCCCCCccccccCCCC-c-hhHHHHHHHHHhC-ccchH-------------HHHHHHHHHcCCCCCCCCCcccc
Q 036917           24 RFNLPPGPRPLPIVGNLYDIKP-V-RFRCFAEWAQQYG-QSFRF-------------ELAREVLKEHDQQLADRHRSRSA   87 (280)
Q Consensus        24 ~~~~pPgP~~~p~lG~~~~~~~-~-~~~~~~~~~~kyG-~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~   87 (280)
                      +.++||||.++|++||++++.. . .+..+.+|.++|| +|+++             +.+++++.+++..|.+|+.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            4478999999999999988843 2 4678999999999 78776             99999999999999999865444


Q ss_pred             ccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhc--CCCCeee--------------
Q 036917           88 AKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKD--CTDPHNF--------------  151 (280)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~~~--------------  151 (280)
                      ..++.+..+++++.+|+.|+++|+++++.++++...+.+.+.++++++.+++.+.+.  .++++++              
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            445444335677778999999999997667776666666666666666666554321  1111111              


Q ss_pred             ------e-e-----------------------------e---------------c-------------------------
Q 036917          152 ------V-A-----------------------------F---------------T-------------------------  155 (280)
Q Consensus       152 ------~-~-----------------------------~---------------~-------------------------  155 (280)
                            . .                             +               .                         
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  294 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIK  294 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  0 0                             0               0                         


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       295 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~  374 (543)
T PLN02971        295 MWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK  374 (543)
T ss_pred             HHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence                                                                                            


Q ss_pred             ------------------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCccc
Q 036917          156 ------------------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFF  187 (280)
Q Consensus       156 ------------------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l  187 (280)
                                                                      ||||.|+++.|++|+||++|+||++|+||||+
T Consensus       375 ~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl  454 (543)
T PLN02971        375 ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHL  454 (543)
T ss_pred             CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCC
Confidence                                                            99999999999999999999999999999999


Q ss_pred             ccCcCC--CCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeee
Q 036917          188 EEDVDM--KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPT  265 (280)
Q Consensus       188 ~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (280)
                      +++.+.  ...++.++|||.|+|.|+|++||+.|+++++|+|+++|+|++..+.  ..+++++.++ ++-..+++.+.++
T Consensus       455 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~  531 (543)
T PLN02971        455 NECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMVGE  531 (543)
T ss_pred             CCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceeeee
Confidence            754321  2245689999999999999999999999999999999999988653  3566666666 5545579999999


Q ss_pred             ecCCCcch
Q 036917          266 PRLPSHLY  273 (280)
Q Consensus       266 ~R~~~~~~  273 (280)
                      ||..+.+|
T Consensus       532 ~~~~~~~~  539 (543)
T PLN02971        532 LRLSEDLY  539 (543)
T ss_pred             ecCCcccc
Confidence            99887776


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.4e-41  Score=299.79  Aligned_cols=249  Identities=37%  Similarity=0.678  Sum_probs=194.5

Q ss_pred             HHHhcCCCCCCCCCCCCCccccccCCCCc-hhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCC
Q 036917           18 KLYQRLRFNLPPGPRPLPIVGNLYDIKPV-RFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHR   83 (280)
Q Consensus        18 ~~~~~~~~~~pPgP~~~p~lG~~~~~~~~-~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~   83 (280)
                      +....++.+.||||+++|++||++++..+ .+..+.+|+++||+||++             +.+++++.+++..|.+++.
T Consensus        22 ~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~  101 (503)
T PLN02394         22 SKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTR  101 (503)
T ss_pred             HHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Confidence            33345667899999999999999888544 578999999999999876             8999999888887887764


Q ss_pred             ccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcC---CCCeee---------
Q 036917           84 SRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDC---TDPHNF---------  151 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~~---------  151 (280)
                      ......+...+.+.+++.+|+.|+++|+.+..+.|+..+++.+.+.++++++++++.+.+..   +..+++         
T Consensus       102 ~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~  181 (503)
T PLN02394        102 NVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMY  181 (503)
T ss_pred             cchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHH
Confidence            44434333333356667779999999999865889998898888888888888888776432   111221         


Q ss_pred             -----eeec-----------------------------------------------------------------------
Q 036917          152 -----VAFT-----------------------------------------------------------------------  155 (280)
Q Consensus       152 -----~~~~-----------------------------------------------------------------------  155 (280)
                           +.++                                                                       
T Consensus       182 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        182 NIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 0000                                                                       


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  341 (503)
T PLN02394        262 LMSAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG  341 (503)
T ss_pred             HhhhccCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence                                                                                            


Q ss_pred             -----------------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccc
Q 036917          156 -----------------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFE  188 (280)
Q Consensus       156 -----------------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~  188 (280)
                                                                     |+||.|.++.|++|+||++|+||++|+||||++
T Consensus       342 ~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~  421 (503)
T PLN02394        342 NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLE  421 (503)
T ss_pred             CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCC
Confidence                                                           999999999999999999999999999999997


Q ss_pred             cCcC--CCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCC-CccccccCCceEeee
Q 036917          189 EDVD--MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENP-GLVTYMKTPLQAVPT  265 (280)
Q Consensus       189 ~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  265 (280)
                      ++..  .+.....++|||.|+|.|+|++||++|+++++|.++++|+|++.++.  ..++..+.. ++...++.++++++.
T Consensus       422 ~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  499 (503)
T PLN02394        422 EEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ--SKIDVSEKGGQFSLHIAKHSTVVFK  499 (503)
T ss_pred             CCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC--CcCccccccCceeeccCCCceEEee
Confidence            6432  22345689999999999999999999999999999999999987763  134445444 355546679999999


Q ss_pred             ecC
Q 036917          266 PRL  268 (280)
Q Consensus       266 ~R~  268 (280)
                      ||+
T Consensus       500 ~r~  502 (503)
T PLN02394        500 PRS  502 (503)
T ss_pred             cCC
Confidence            997


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=9.4e-41  Score=297.57  Aligned_cols=243  Identities=26%  Similarity=0.510  Sum_probs=187.1

Q ss_pred             CCCCCCCCCCCCccccccCCC---CchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCcccc
Q 036917           24 RFNLPPGPRPLPIVGNLYDIK---PVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSA   87 (280)
Q Consensus        24 ~~~~pPgP~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~   87 (280)
                      ..++||||+++|++||++.+.   .+++..+.+|+++||++|++             +.+++++.++...|++++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            457899999999999998663   35788999999999999887             89999999989989888764433


Q ss_pred             ccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCC--CCeee--------------
Q 036917           88 AKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCT--DPHNF--------------  151 (280)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~~--------------  151 (280)
                      ..++.+...+.+..+|+.|+++||.+..++|+..+++.+.+.+.++++.+++.+.+..+  ..+++              
T Consensus       113 ~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~  192 (519)
T PLN00168        113 RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVL  192 (519)
T ss_pred             hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence            34443222233346799999999855448999998998888888877777776643211  10110              


Q ss_pred             -----------------------------------------------------------------------ee-------
Q 036917          152 -----------------------------------------------------------------------VA-------  153 (280)
Q Consensus       152 -----------------------------------------------------------------------~~-------  153 (280)
                                                                                             ..       
T Consensus       193 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  272 (519)
T PLN00168        193 MCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGG  272 (519)
T ss_pred             HHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Confidence                                                                                   00       


Q ss_pred             ---------e-c--------------------------------------------------------------------
Q 036917          154 ---------F-T--------------------------------------------------------------------  155 (280)
Q Consensus       154 ---------~-~--------------------------------------------------------------------  155 (280)
                               . +                                                                    
T Consensus       273 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  352 (519)
T PLN00168        273 EPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTG  352 (519)
T ss_pred             ccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence                     0 0                                                                    


Q ss_pred             --------------------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCc
Q 036917          156 --------------------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPER  185 (280)
Q Consensus       156 --------------------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR  185 (280)
                                                                        ||||.|.++.+++|+||++|+||++|+|||
T Consensus       353 ~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeR  432 (519)
T PLN00168        353 DDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPER  432 (519)
T ss_pred             CCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCccc
Confidence                                                              999999999999999999999999999999


Q ss_pred             ccccCcC-----CCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCc
Q 036917          186 FFEEDVD-----MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPL  260 (280)
Q Consensus       186 ~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
                      |++++..     ...+++.++|||.|+|.|+|++||++|++++++.++++|+|++.++   .+++.....+++..+.+++
T Consensus       433 f~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~  509 (519)
T PLN00168        433 FLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG---DEVDFAEKREFTTVMAKPL  509 (519)
T ss_pred             CCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC---CcCChhhhceeEEeecCCc
Confidence            9975321     1123457999999999999999999999999999999999999876   3344333334566667899


Q ss_pred             eEeeeecCC
Q 036917          261 QAVPTPRLP  269 (280)
Q Consensus       261 ~~~~~~R~~  269 (280)
                      .+++++|+.
T Consensus       510 ~~~~~~R~~  518 (519)
T PLN00168        510 RARLVPRRT  518 (519)
T ss_pred             EEEEEeccC
Confidence            999999974


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.6e-40  Score=292.13  Aligned_cols=255  Identities=38%  Similarity=0.767  Sum_probs=192.6

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCccccccCC-CCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCC
Q 036917           12 FIILAYKLYQRLRFNLPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQ   77 (280)
Q Consensus        12 ~~~~~~~~~~~~~~~~pPgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~   77 (280)
                      ++++++....+...++||||.++|++||++++ ..+++.++.+|+++||++|++             +.+++++.+++..
T Consensus        15 ~~~~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~   94 (502)
T PLN02966         15 LLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVN   94 (502)
T ss_pred             HHHHHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCccc
Confidence            33333444444455789999999999999988 457899999999999999854             8999999987877


Q ss_pred             CCCCCCccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcC--CCCeee----
Q 036917           78 LADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDC--TDPHNF----  151 (280)
Q Consensus        78 f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~----  151 (280)
                      |.+++..........+...+.++.+|+.|+.+|+++.+++|+..+++.+.+.+++.+.++++.+.+..  ++.+++    
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~  174 (502)
T PLN02966         95 FADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELM  174 (502)
T ss_pred             ccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHH
Confidence            87665433333322222344556668999999999554899999999999999999999988886432  222222    


Q ss_pred             ----------eeec------------------------------------------------------------------
Q 036917          152 ----------VAFT------------------------------------------------------------------  155 (280)
Q Consensus       152 ----------~~~~------------------------------------------------------------------  155 (280)
                                ..++                                                                  
T Consensus       175 ~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  254 (502)
T PLN02966        175 LTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNE  254 (502)
T ss_pred             HHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence                      0000                                                                  


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       255 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  334 (502)
T PLN02966        255 TLDPKRVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYM  334 (502)
T ss_pred             HHhccccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------CCcceEEEeeehhccCCCCC-CCCCCCC
Q 036917          156 ----------------------------------------------------LSGSNIHVNVWAVARDPAVW-KDPLEFR  182 (280)
Q Consensus       156 ----------------------------------------------------pkgt~v~~~~~~~~~d~~~~-~~~~~F~  182 (280)
                                                                          ||||.|.++.|++|+||++| +||++|+
T Consensus       335 ~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~  414 (502)
T PLN02966        335 KEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFR  414 (502)
T ss_pred             cccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCC
Confidence                                                                99999999999999999999 9999999


Q ss_pred             CCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceE
Q 036917          183 PERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQA  262 (280)
Q Consensus       183 peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (280)
                      ||||++++......+..++|||+|+|.|+|++||++|+++++|.++++|+|++.++...+.++.+...++...+.+++  
T Consensus       415 PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--  492 (502)
T PLN02966        415 PERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHL--  492 (502)
T ss_pred             hhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCe--
Confidence            999997544322345689999999999999999999999999999999999998874333455555556655444455  


Q ss_pred             eeeecC
Q 036917          263 VPTPRL  268 (280)
Q Consensus       263 ~~~~R~  268 (280)
                      ++++|.
T Consensus       493 ~~~~~~  498 (502)
T PLN02966        493 KLVPEK  498 (502)
T ss_pred             EEEEEe
Confidence            455554


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.8e-40  Score=293.64  Aligned_cols=236  Identities=22%  Similarity=0.438  Sum_probs=189.5

Q ss_pred             HhcCCCCCCCCCCCCCccccccCCCCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCccc
Q 036917           20 YQRLRFNLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRS   86 (280)
Q Consensus        20 ~~~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~   86 (280)
                      +.+.+.+.+|||.++|++||++++..+++..+.+|+++||++|++             +.+++++.++...|.+++....
T Consensus        23 ~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         23 YKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            334455778999999999999999778999999999999999886             8999999887777877765433


Q ss_pred             cccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhc--CCCCeee-------------
Q 036917           87 AAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKD--CTDPHNF-------------  151 (280)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~~~-------------  151 (280)
                      ...... +.++.+. +|+.|+++|++++ +.|+..+++.+.+.+.+.+..+++.+.+.  .++.+++             
T Consensus       103 ~~~~~~-~~~l~~~-~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        103 IKHGTF-YHGIVTS-SGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             eeeecc-CCceecc-ChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Confidence            221111 3355544 5999999999998 89999999999999999999999988642  2222332             


Q ss_pred             -------e---e--e----c------------------------------------------------------------
Q 036917          152 -------V---A--F----T------------------------------------------------------------  155 (280)
Q Consensus       152 -------~---~--~----~------------------------------------------------------------  155 (280)
                             .   .  .    .                                                            
T Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  259 (482)
T PTZ00404        180 KYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP  259 (482)
T ss_pred             HHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence                   0   0  0    0                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       260 ~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l  339 (482)
T PTZ00404        260 EVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDR  339 (482)
T ss_pred             CCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCcccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCC
Q 036917          156 ----------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKG  195 (280)
Q Consensus       156 ----------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~  195 (280)
                                                              ||||.|.++.+++|+||++|+||++|+||||+++.     
T Consensus       340 ~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----  414 (482)
T PTZ00404        340 QSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----  414 (482)
T ss_pred             ccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----
Confidence                                                    99999999999999999999999999999998642     


Q ss_pred             CCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeec
Q 036917          196 HDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPR  267 (280)
Q Consensus       196 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  267 (280)
                      ....++|||.|+|.|+|++||++|++++++.++++|+|++.++   .++......++++. +.++.+.+++|
T Consensus       415 ~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~---~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        415 SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG---KKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC---CCCCcccccceeec-CCCceeeeecC
Confidence            3458999999999999999999999999999999999998766   33333334566665 57899999987


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.6e-39  Score=287.57  Aligned_cols=235  Identities=23%  Similarity=0.423  Sum_probs=181.3

Q ss_pred             CCCCCCCCCCCCccccccCCCC-------------------chhHHHHHHHHHhCccchH-------------HHHHHHH
Q 036917           24 RFNLPPGPRPLPIVGNLYDIKP-------------------VRFRCFAEWAQQYGQSFRF-------------ELAREVL   71 (280)
Q Consensus        24 ~~~~pPgP~~~p~lG~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~-------------~~~~~il   71 (280)
                      +.+.||||+++|++||++++..                   .....+.+|+++||++|++             +.+++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            3456899999999999988732                   2223578999999998876             9999999


Q ss_pred             HHcCCCCCCCCCccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcC---CCC
Q 036917           72 KEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDC---TDP  148 (280)
Q Consensus        72 ~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~  148 (280)
                      .++ ..+.+++...........+.++.++ +|+.|+++|++++ +.|+..+++.+.+.+.++++++++.+.+..   +..
T Consensus       120 ~~~-~~~~~r~~~~~~~~~~~~g~~l~~~-~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKY-NTVTGKSWLQQQGTKHFIGRGLLMA-NGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcC-CCCCCCcchhhhHHHHHhcCCcccc-CchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            876 4455565322111111112355554 5999999999998 889999999999999999999999987532   123


Q ss_pred             eee--------------eeec-----------------------------------------------------------
Q 036917          149 HNF--------------VAFT-----------------------------------------------------------  155 (280)
Q Consensus       149 ~~~--------------~~~~-----------------------------------------------------------  155 (280)
                      +++              +.++                                                           
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  276 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQ  276 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            333              0000                                                           


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~E  356 (516)
T PLN02290        277 SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAE  356 (516)
T ss_pred             HHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             -----------------------------------------------------CCcceEEEeeehhccCCCCC-CCCCCC
Q 036917          156 -----------------------------------------------------LSGSNIHVNVWAVARDPAVW-KDPLEF  181 (280)
Q Consensus       156 -----------------------------------------------------pkgt~v~~~~~~~~~d~~~~-~~~~~F  181 (280)
                                                                           ||||.|.++.|++|+||++| +||++|
T Consensus       357 i~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F  436 (516)
T PLN02290        357 VAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEF  436 (516)
T ss_pred             HHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhc
Confidence                                                                 99999999999999999999 899999


Q ss_pred             CCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCce
Q 036917          182 RPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQ  261 (280)
Q Consensus       182 ~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (280)
                      +||||++++..   ....++|||.|+|.|+|++||++|++++++.++++|+|++.++.   +.  .....+++.|.++++
T Consensus       437 ~PeRfl~~~~~---~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~---~~--~~~~~~~~~p~~~~~  508 (516)
T PLN02290        437 NPDRFAGRPFA---PGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY---RH--APVVVLTIKPKYGVQ  508 (516)
T ss_pred             CccccCCCCCC---CCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc---cc--CccceeeecCCCCCe
Confidence            99999954321   23479999999999999999999999999999999999988762   21  112357778889999


Q ss_pred             EeeeecCC
Q 036917          262 AVPTPRLP  269 (280)
Q Consensus       262 ~~~~~R~~  269 (280)
                      +++++|+|
T Consensus       509 ~~~~~~~~  516 (516)
T PLN02290        509 VCLKPLNP  516 (516)
T ss_pred             EEEEeCCC
Confidence            99999986


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.6e-39  Score=283.26  Aligned_cols=237  Identities=27%  Similarity=0.524  Sum_probs=186.5

Q ss_pred             CCCCCCCCccccccCCC-CchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCccccccccCC
Q 036917           28 PPGPRPLPIVGNLYDIK-PVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAAKFSRD   93 (280)
Q Consensus        28 pPgP~~~p~lG~~~~~~-~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~~~~~~   93 (280)
                      ||||+++|++||++++. .+++..+.+|+++||++|++             +.+++++.++...|.+++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999999985 56899999999999999987             99999999999999888654433434433


Q ss_pred             CCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhc----CCCCeee------------------
Q 036917           94 GKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKD----CTDPHNF------------------  151 (280)
Q Consensus        94 ~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~----~~~~~~~------------------  151 (280)
                      +..+.+.++|+.|+++|+.+.+++++...++.+.+.+++.+..+++.+.+.    +++.+++                  
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            334556667999999999887678888777877777777777766666432    1222221                  


Q ss_pred             ---ee---------------ec----------------------------------------------------------
Q 036917          152 ---VA---------------FT----------------------------------------------------------  155 (280)
Q Consensus       152 ---~~---------------~~----------------------------------------------------------  155 (280)
                         ..               +.                                                          
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence               00               00                                                          


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       241 ~~~~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~l~~l  320 (466)
T PLN02655        241 GEERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDERVTEEDLPNL  320 (466)
T ss_pred             CCCcccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCHHHHhcC
Confidence                                                                                            


Q ss_pred             ------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCc
Q 036917          156 ------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFR  199 (280)
Q Consensus       156 ------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~  199 (280)
                                                          ||||.|+++.+++|+|+++|+||++|+||||++++.... ..+.
T Consensus       321 ~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~-~~~~  399 (466)
T PLN02655        321 PYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESA-DMYK  399 (466)
T ss_pred             hHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccC-Cccc
Confidence                                                999999999999999999999999999999997543221 3468


Q ss_pred             cccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          200 LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       200 ~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      ++|||.|+|.|+|++||+.|++++++.|+++|+|++.++.   . ......++++.+.+++.+++++|+.
T Consensus       400 ~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        400 TMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD---E-EKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             ccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC---c-cccchhheeEeecCCcEEEEeecCC
Confidence            9999999999999999999999999999999999997662   1 1122346777788999999999864


No 15 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.6e-38  Score=278.25  Aligned_cols=229  Identities=20%  Similarity=0.331  Sum_probs=176.6

Q ss_pred             cCCCCCCCCCCCCCccccccCCCCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCccccc
Q 036917           22 RLRFNLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAA   88 (280)
Q Consensus        22 ~~~~~~pPgP~~~p~lG~~~~~~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~   88 (280)
                      ..++++||||+++|++||++.+..+++.++.+++++||++|++             +.+++++.++...|..+.......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            4456889999999999999888667788999999999999988             999999987776664332222223


Q ss_pred             cccCCCCceEEccCCchHHHHHhhhhhcccChHHHhh-hhHHHHHHHHHHHHHHhhcCCCCeeee--------------e
Q 036917           89 KFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEA-LRPIREDEVTAMVESIFKDCTDPHNFV--------------A  153 (280)
Q Consensus        89 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~--------------~  153 (280)
                      .++.  .++.. .+|+.|+.+|++++ ++|++..++. +.+.+.+.++++++.+...  +.+++.              .
T Consensus       107 ~lg~--~~~~~-~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~  180 (463)
T PLN02774        107 ILGT--CNIAA-VHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDGL--KTIDIQEKTKEMALLSALKQI  180 (463)
T ss_pred             HhCc--cchhh-cCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCCC--CCEEeeHHHHHHHHHHHHHHH
Confidence            3332  24444 45999999999998 8999998886 6788888888887776431  122220              0


Q ss_pred             ec------------------------------------------------------------------------------
Q 036917          154 FT------------------------------------------------------------------------------  155 (280)
Q Consensus       154 ~~------------------------------------------------------------------------------  155 (280)
                      ++                                                                              
T Consensus       181 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~~~  260 (463)
T PLN02774        181 AGTLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETHTDMLGYLMRKEGNRYKL  260 (463)
T ss_pred             cCCCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhCccCCCCC
Confidence            00                                                                              


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       261 s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~  340 (463)
T PLN02774        261 TDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLA  340 (463)
T ss_pred             CHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcC
Confidence                                                                                            


Q ss_pred             ---------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHH
Q 036917          156 ---------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQ  214 (280)
Q Consensus       156 ---------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~  214 (280)
                                           ||||.|+++.+++|+||++|+||++|+||||++++...  . ..++|||+|+|.|+|++
T Consensus       341 P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~--~-~~~lpFG~G~r~C~G~~  417 (463)
T PLN02774        341 TIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLES--H-NYFFLFGGGTRLCPGKE  417 (463)
T ss_pred             CCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCC--C-ccccCcCCCCCcCCcHH
Confidence                                 99999999999999999999999999999999654221  2 36999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeee
Q 036917          215 LGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTP  266 (280)
Q Consensus       215 ~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (280)
                      ||++|++++++.|+++|+|++.++   .++...   . +..+.++++++++|
T Consensus       418 ~A~~e~~~~la~Ll~~f~~~~~~~---~~~~~~---~-~~~p~~g~~~~~~~  462 (463)
T PLN02774        418 LGIVEISTFLHYFVTRYRWEEVGG---DKLMKF---P-RVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHHHHHHHHHHHHhceEEECCC---CccccC---C-CCCCCCCceEEeee
Confidence            999999999999999999999876   332221   2 23356899999875


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.1e-38  Score=279.82  Aligned_cols=232  Identities=20%  Similarity=0.322  Sum_probs=173.5

Q ss_pred             cCCCCCCCCCCCCCccccccCC-C----CchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCC
Q 036917           22 RLRFNLPPGPRPLPIVGNLYDI-K----PVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHR   83 (280)
Q Consensus        22 ~~~~~~pPgP~~~p~lG~~~~~-~----~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~   83 (280)
                      +.+.++||||+++|++||++.+ .    ..++.++.+++++||++|++             +.+++++.+++..|.++..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            3445789999999999997654 1    35678899999999999987             8999999988777765432


Q ss_pred             ccccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhh-hhHHHHHHHHHHHHHHhhcCCCCeee-----------
Q 036917           84 SRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEA-LRPIREDEVTAMVESIFKDCTDPHNF-----------  151 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~-----------  151 (280)
                      ......++.  .++.+. +|+.|+++|++++ +.|+..+++. +.+.+.+.+..+++.+.+.  ..+++           
T Consensus       114 ~~~~~~~g~--~~~~~~-~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        114 RSIGGILGK--WSMLVL-VGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKEN--STFSAQDEAKKFTFNL  187 (490)
T ss_pred             hHHHHHhCc--cccccc-CCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCCC--CCEEehHHHHHHHHHH
Confidence            222223331  245555 5999999999998 8899888876 4566666666666655321  12222           


Q ss_pred             ---eeec-------------------------------------------------------------------------
Q 036917          152 ---VAFT-------------------------------------------------------------------------  155 (280)
Q Consensus       152 ---~~~~-------------------------------------------------------------------------  155 (280)
                         ..++                                                                         
T Consensus       188 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~  267 (490)
T PLN02500        188 MAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLG  267 (490)
T ss_pred             HHHHHhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHH
Confidence               0000                                                                         


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       268 ~ll~~~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~  347 (490)
T PLN02500        268 WVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQ  347 (490)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHH
Confidence                                                                                            


Q ss_pred             -------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCC------CCCC
Q 036917          156 -------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMK------GHDF  198 (280)
Q Consensus       156 -------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~------~~~~  198 (280)
                                                     ||||.|+++.|++|+||++|+||++|+||||++++...+      ..++
T Consensus       348 avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~  427 (490)
T PLN02500        348 CVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTN  427 (490)
T ss_pred             HHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCC
Confidence                                           999999999999999999999999999999997543211      2456


Q ss_pred             ccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeee
Q 036917          199 RLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTP  266 (280)
Q Consensus       199 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (280)
                      .++|||+|+|.|+|++||++|++++++.++++|+|++.++.   +...   ..... +++++.|++++
T Consensus       428 ~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~---~~~~---~~~~~-~~~~l~~~~~~  488 (490)
T PLN02500        428 NFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD---QAFA---FPFVD-FPKGLPIRVRR  488 (490)
T ss_pred             CCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC---ccee---ccccc-CCCCceEEEEe
Confidence            89999999999999999999999999999999999987763   2111   12233 34688888765


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.5e-37  Score=274.21  Aligned_cols=236  Identities=29%  Similarity=0.522  Sum_probs=186.9

Q ss_pred             CCCCCCCCCCCCccccccCCC---CchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCcc-c
Q 036917           24 RFNLPPGPRPLPIVGNLYDIK---PVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSR-S   86 (280)
Q Consensus        24 ~~~~pPgP~~~p~lG~~~~~~---~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~-~   86 (280)
                      ....||||.+||++|+++++.   .....++.++..+||++|+.             +.+++++.++.+.+...+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            567889999999999999983   35778899999999988877             889999965555444333333 2


Q ss_pred             c-ccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCCCC-eee------eeec---
Q 036917           87 A-AKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCTDP-HNF------VAFT---  155 (280)
Q Consensus        87 ~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~------~~~~---  155 (280)
                      . ..++   .++++.+ |+.|+.+||+++ ++|+...++.+.....+.+..+...+....... +++      .+++   
T Consensus       113 ~~~~lG---~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWLG---DGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHhc---CccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHH
Confidence            2 3443   3667777 999999999999 999999999888777776666555544322111 322      0000   


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       268 ~~~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~  347 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEK  347 (497)
T ss_pred             ccchhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhh
Confidence                                                                                            


Q ss_pred             ----------------------------------------CCcceEEEeeehhccCCCCCC-CCCCCCCCcccccCcCCC
Q 036917          156 ----------------------------------------LSGSNIHVNVWAVARDPAVWK-DPLEFRPERFFEEDVDMK  194 (280)
Q Consensus       156 ----------------------------------------pkgt~v~~~~~~~~~d~~~~~-~~~~F~peR~l~~~~~~~  194 (280)
                                                              |||+.|.++++++|||+.+|+ ||++|+||||++++....
T Consensus       348 ~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~  427 (497)
T KOG0157|consen  348 LDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAK  427 (497)
T ss_pred             hhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCC
Confidence                                                    999999999999999999996 999999999997655545


Q ss_pred             CCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          195 GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       195 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      .+++.|+|||+|+|.|+|++||++||+++++.++++|+|++..+.   .  ......+++.+.++++|+++||..
T Consensus       428 ~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~---~--~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  428 RHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD---K--PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             CCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC---C--ceeeeEEEEEecCCeEEEEEeCCC
Confidence            567899999999999999999999999999999999999999873   2  444467889999999999999963


No 18 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4.4e-37  Score=270.40  Aligned_cols=226  Identities=21%  Similarity=0.341  Sum_probs=176.0

Q ss_pred             CCCCCCCCCCCCCccccccCC-CCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCccccc
Q 036917           23 LRFNLPPGPRPLPIVGNLYDI-KPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAA   88 (280)
Q Consensus        23 ~~~~~pPgP~~~p~lG~~~~~-~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~   88 (280)
                      ++.+.||||.++|++||++++ .++++.++.+++++||+++++             +.+++++.++.+.|.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            345788999999999999876 678999999999999999886             999999987777663  2221111


Q ss_pred             cccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCCCCeee--------------eee
Q 036917           89 KFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCTDPHNF--------------VAF  154 (280)
Q Consensus        89 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~--------------~~~  154 (280)
                      ....+..++.+. +|+.|+++|+++. +.|++.+++.+.+.+++.+.++++.+..   +.++.              ..+
T Consensus       110 ~~~~g~~~l~~~-~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~---~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        110 ERMLGKQAIFFH-QGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWEG---TQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             HHHcCccccccc-CcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCCC---CeEEeHHHHHHHHHHHHHHHHc
Confidence            111112244444 5999999999999 8999999999999999998888887632   11221              000


Q ss_pred             c-------------------------------------------------------------------------------
Q 036917          155 T-------------------------------------------------------------------------------  155 (280)
Q Consensus       155 ~-------------------------------------------------------------------------------  155 (280)
                      +                                                                               
T Consensus       185 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~~~l~~~e  264 (463)
T PLN02196        185 GKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGSSHNDLLGSFMGDKEGLTDEQ  264 (463)
T ss_pred             CCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHhcCCCCCHHH
Confidence            0                                                                               


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       265 i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~  344 (463)
T PLN02196        265 IADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILS  344 (463)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcc
Confidence                                                                                            


Q ss_pred             -----------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHH
Q 036917          156 -----------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGIN  218 (280)
Q Consensus       156 -----------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~  218 (280)
                                       ||||.|.++.+++|+|+++|+||++|+||||+.+.     .+..++|||.|+|.|+|+++|+.
T Consensus       345 ~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~  419 (463)
T PLN02196        345 FTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKL  419 (463)
T ss_pred             ccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHH
Confidence                             99999999999999999999999999999998632     34589999999999999999999


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeee
Q 036917          219 LVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTP  266 (280)
Q Consensus       219 e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (280)
                      |++++++.|+++|+|++.+++    ....  ...+..|..++.|+++.
T Consensus       420 e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        420 EISVLIHHLTTKYRWSIVGTS----NGIQ--YGPFALPQNGLPIALSR  461 (463)
T ss_pred             HHHHHHHHHHHhcEEEEcCCC----CceE--EcccccCCCCceEEEec
Confidence            999999999999999987652    2222  23344577888888753


No 19 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.9e-36  Score=268.35  Aligned_cols=114  Identities=33%  Similarity=0.651  Sum_probs=92.4

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCC-----CCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMK-----GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHH  230 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~  230 (280)
                      ||||.|.++.|++|+||++|+||++|+||||+++++..+     ..+..++|||.|+|.|+|++||++|+++++++++++
T Consensus       410 pkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~  489 (534)
T PLN03018        410 PKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQG  489 (534)
T ss_pred             CCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999997543211     244689999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecCCCcc
Q 036917          231 FAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLPSHL  272 (280)
Q Consensus       231 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~  272 (280)
                      |+|++.++.  .+++.....+.+. .+.++.++++||...++
T Consensus       490 f~~~~~~~~--~~~~~~~~~~~~~-~p~~~~v~~~~R~~~~~  528 (534)
T PLN03018        490 FNWKLHQDF--GPLSLEEDDASLL-MAKPLLLSVEPRLAPNL  528 (534)
T ss_pred             ceEEeCCCC--CCCCcccccccee-cCCCeEEEEEecccccc
Confidence            999987652  1333333334444 45799999999954433


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=5.5e-38  Score=275.70  Aligned_cols=230  Identities=33%  Similarity=0.607  Sum_probs=182.0

Q ss_pred             CCCCCCCCccccccCCC--CchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCcccccc--c
Q 036917           28 PPGPRPLPIVGNLYDIK--PVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAAK--F   90 (280)
Q Consensus        28 pPgP~~~p~lG~~~~~~--~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~~--~   90 (280)
                      ||||+++|++||++++.  +.++..+.+++++||+||++             +.+++++..+...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999985  78899999999999999998             9999999887777776544333322  1


Q ss_pred             cCCCCceEEccCCchHHHHHhhhhhcccChH-HHhhhhHHHHHHHHHHHHHHhhcCCCC--eee--------------ee
Q 036917           91 SRDGKDLIWADYGPHYVKVRKVCTLELFTPK-RLEALRPIREDEVTAMVESIFKDCTDP--HNF--------------VA  153 (280)
Q Consensus        91 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~--~~~--------------~~  153 (280)
                      ...+.++.+.+ ++.|+.+|+.+. +.|+.. .+ .+.+.+++.++.+++.+.+..+..  +++              ..
T Consensus        81 ~~~~~~l~~~~-~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGLFFSD-GERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSSTTSS-HHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc-cccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            22234555555 799999999999 777777 66 899999999999999998877654  444              01


Q ss_pred             ec------------------------------------------------------------------------------
Q 036917          154 FT------------------------------------------------------------------------------  155 (280)
Q Consensus       154 ~~------------------------------------------------------------------------------  155 (280)
                      ++                                                                              
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  237 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDES  237 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSSS
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            11                                                                              


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       238 ~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  317 (463)
T PF00067_consen  238 RRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFED  317 (463)
T ss_dssp             CSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCC
Q 036917          156 ----------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKG  195 (280)
Q Consensus       156 ----------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~  195 (280)
                                                              ||||.|.++.+++|+||++|+||++|+||||++++.....
T Consensus       318 l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~  397 (463)
T PF00067_consen  318 LSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNR  397 (463)
T ss_dssp             HGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                                    9999999999999999999999999999999998773333


Q ss_pred             CCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCC-CccccccCCceEee
Q 036917          196 HDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENP-GLVTYMKTPLQAVP  264 (280)
Q Consensus       196 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  264 (280)
                      ....++|||.|+|.|+|++||+.|++++++.+|++|+|++.++.   +....... ++.. ++.+++|+|
T Consensus       398 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  398 PSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGS---EPEPQEQQNGFLL-PPKPLKVKF  463 (463)
T ss_dssp             SSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTS---SGGEEECSCSSSE-EESSSEEEE
T ss_pred             ccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCC---CCCCccccCceEe-eCCCcEEeC
Confidence            56689999999999999999999999999999999999997763   33333222 3444 557888875


No 21 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.2e-36  Score=267.15  Aligned_cols=102  Identities=27%  Similarity=0.449  Sum_probs=89.4

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccC
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP  235 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~  235 (280)
                      ||||.|+++.+++|+|+++|+||++|+||||++++.    .++.++|||+|+|.|+|++||++|+++++|.|+++|+|++
T Consensus       350 PkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~  425 (452)
T PLN03141        350 PKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVA  425 (452)
T ss_pred             CCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeec
Confidence            999999999999999999999999999999997532    3458999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          236 PEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      .++   ..+.     ..++.+.+++.|++++|+.
T Consensus       426 ~~~---~~~~-----~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        426 EED---TIVN-----FPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             CCC---Ceee-----cccccCCCCceEEEEeCCC
Confidence            765   2221     2466777899999999964


No 22 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2e-36  Score=265.93  Aligned_cols=105  Identities=25%  Similarity=0.395  Sum_probs=90.8

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccC
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP  235 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~  235 (280)
                      ||||.|+++.+++|+||++|+||++|+||||++++.... ..+.++|||+|+|.|+|++||+.|++++++.|+++|+|++
T Consensus       365 p~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~-~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  443 (472)
T PLN02987        365 PKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTV-PSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVP  443 (472)
T ss_pred             CCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCC-CCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEE
Confidence            999999999999999999999999999999997543322 3457999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          236 PEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                      ..+   .++..    ..++.|.+++.+++++|.
T Consensus       444 ~~~---~~~~~----~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        444 AEQ---DKLVF----FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCC---Cceee----cccccCCCCceEEEEecc
Confidence            766   33222    347778889999999995


No 23 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=6.6e-36  Score=265.34  Aligned_cols=230  Identities=22%  Similarity=0.319  Sum_probs=175.9

Q ss_pred             CCCCCCCCCCCCCccccccCC-----CCchhHHHHHHHHHhCc--cchH-------------HHHHHHHHHcCCCCCCCC
Q 036917           23 LRFNLPPGPRPLPIVGNLYDI-----KPVRFRCFAEWAQQYGQ--SFRF-------------ELAREVLKEHDQQLADRH   82 (280)
Q Consensus        23 ~~~~~pPgP~~~p~lG~~~~~-----~~~~~~~~~~~~~kyG~--v~~~-------------~~~~~il~~~~~~f~~r~   82 (280)
                      ...++||||.++|++||++++     ..+++.++.+++++||+  ++++             +.+++++.++ +.|.++.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            344789999999999999876     35789999999999997  6764             8999999754 4454443


Q ss_pred             CccccccccCCCCceEEccCCchHHHHHhhhhhccc-ChHHHhhhhHHHHHHHHHHHHHHhhcCCCCeee----------
Q 036917           83 RSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELF-TPKRLEALRPIREDEVTAMVESIFKDCTDPHNF----------  151 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~----------  151 (280)
                      .......++.   ......+|+.|+++|+.+. +.| ++.+++.+.+.+.+.+.++++.+....  .+++          
T Consensus       118 ~~~~~~~~g~---~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~--~v~~~~~~~~~~~~  191 (490)
T PLN02302        118 PESTVELIGR---KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSKMG--EIEFLTELRKLTFK  191 (490)
T ss_pred             chhHHHHhcc---ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcCCC--CEehHHHHHHHHHH
Confidence            2222222221   2233345999999999999 666 578889899998888888887764321  1222          


Q ss_pred             ----eeec------------------------------------------------------------------------
Q 036917          152 ----VAFT------------------------------------------------------------------------  155 (280)
Q Consensus       152 ----~~~~------------------------------------------------------------------------  155 (280)
                          ..++                                                                        
T Consensus       192 vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~  271 (490)
T PLN02302        192 IIMYIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDL  271 (490)
T ss_pred             HHHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHH
Confidence                0000                                                                        


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       272 ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lp  351 (490)
T PLN02302        272 LLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKME  351 (490)
T ss_pred             HHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcCh
Confidence                                                                                            


Q ss_pred             ----------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCccc
Q 036917          156 ----------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFRLL  201 (280)
Q Consensus       156 ----------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~~~  201 (280)
                                                        ||||.|.++.+++|+|+++|+||++|+||||++.+.    .+..++
T Consensus       352 yl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~----~~~~~~  427 (490)
T PLN02302        352 YLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP----KAGTFL  427 (490)
T ss_pred             HHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC----CCCCcc
Confidence                                              999999999999999999999999999999996432    445899


Q ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          202 PFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       202 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      |||.|+|.|+|++||++|++++++.++++|+|++.++.    ....  ...+..|.+++.+++++|+.
T Consensus       428 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        428 PFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCCCCCCCceEEEEeccC
Confidence            99999999999999999999999999999999987652    1122  12346677899999999875


No 24 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.3e-35  Score=262.84  Aligned_cols=107  Identities=24%  Similarity=0.564  Sum_probs=92.6

Q ss_pred             CCcceEEEeeehhccCCCCC-CCCCCCCCCcccccCcCCC-CCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccc
Q 036917          156 LSGSNIHVNVWAVARDPAVW-KDPLEFRPERFFEEDVDMK-GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW  233 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~-~~~~~F~peR~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~  233 (280)
                      ||||.|.++.|++||||++| +||++|+||||+++++... ..++.++|||+|+|.|+|++||++|++++++.++++|+|
T Consensus       391 pkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~  470 (500)
T PLN02169        391 DAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDF  470 (500)
T ss_pred             CCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEE
Confidence            99999999999999999999 8999999999997654332 236789999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCceEeeeec
Q 036917          234 APPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPR  267 (280)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  267 (280)
                      ++.++   .++.  ...++++.+.+++.+++++|
T Consensus       471 ~~~~~---~~~~--~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        471 KVIEG---HKIE--AIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEcCC---CCcc--cccceEEecCCCEEEEEEeC
Confidence            98765   2332  23457778889999999987


No 25 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-35  Score=244.48  Aligned_cols=109  Identities=28%  Similarity=0.567  Sum_probs=95.7

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCC----CCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHc
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMK----GHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF  231 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~----~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f  231 (280)
                      |+|..|.+++..+|+||++|+||++|+|+||++++++.+    .-.+.++|||+|+|.|||+.||++|+++++..+|++|
T Consensus       373 p~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~f  452 (486)
T KOG0684|consen  373 PKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHF  452 (486)
T ss_pred             CCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999998877653    2345689999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          232 AWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                      |+++.++. -.+++.+   .+++.|.++++++.|.|+
T Consensus       453 dleLid~~-~P~~d~s---~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  453 DLELIDGP-FPEVDYS---RMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             ceeecCCC-CCCCCHH---HhhcCCCCCceEEEeecC
Confidence            99999872 2334333   668889999999999886


No 26 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.1e-35  Score=248.38  Aligned_cols=234  Identities=24%  Similarity=0.399  Sum_probs=189.7

Q ss_pred             CCCCCCCCccccccCC----CCchhHHHHHHHHHhCccchH--------------HHHHHHHHHcCCCCCCCC-Ccc---
Q 036917           28 PPGPRPLPIVGNLYDI----KPVRFRCFAEWAQQYGQSFRF--------------ELAREVLKEHDQQLADRH-RSR---   85 (280)
Q Consensus        28 pPgP~~~p~lG~~~~~----~~~~~~~~~~~~~kyG~v~~~--------------~~~~~il~~~~~~f~~r~-~~~---   85 (280)
                      .|||.++|++|.+..+    ..+-|+.....+++||+||+.              +.+..++.. ...+..|| ...   
T Consensus        52 IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~-EG~~P~Rp~~~~~w~  130 (519)
T KOG0159|consen   52 IPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRN-EGKYPFRPLLIEPWV  130 (519)
T ss_pred             cCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhc-CCCCCCcccccchhh
Confidence            4899999999999843    467788899999999999987              666666654 44456664 211   


Q ss_pred             ccccccCCCCceEEccCCchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhcCCC-----Ceee---------
Q 036917           86 SAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKDCTD-----PHNF---------  151 (280)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~---------  151 (280)
                      ......+...|+++.. |+.|.+.|..+++.++.+++++.|.+..++++++++..+.+..+.     ..|+         
T Consensus       131 ~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl  209 (519)
T KOG0159|consen  131 AYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL  209 (519)
T ss_pred             hhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence            1233344444555555 999999999999999999999999999999999999999865442     1122         


Q ss_pred             -----eeec-----------------------------------------------------------------------
Q 036917          152 -----VAFT-----------------------------------------------------------------------  155 (280)
Q Consensus       152 -----~~~~-----------------------------------------------------------------------  155 (280)
                           +.++                                                                       
T Consensus       210 Esi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l  289 (519)
T KOG0159|consen  210 ESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEEL  289 (519)
T ss_pred             HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 0111                                                                       


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       290 ~~~~~~~~~~~~~l~~~L~~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~  369 (519)
T KOG0159|consen  290 EKQDSAGSEYTGSLLELLLRKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELT  369 (519)
T ss_pred             HhccccccchhHHHHHHHHHccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccc
Confidence                                                                                            


Q ss_pred             ------------------------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCC
Q 036917          156 ------------------------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDM  193 (280)
Q Consensus       156 ------------------------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~  193 (280)
                                                                ||||.|.++.+++.+||++|++|++|+||||++++. .
T Consensus       370 ~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~  448 (519)
T KOG0159|consen  370 QKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-K  448 (519)
T ss_pred             hHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-C
Confidence                                                      999999999999999999999999999999999885 3


Q ss_pred             CCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          194 KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       194 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      +.++..++|||.|+|+|+|++||.+||.+.|+.++++|+++..+.   .++..  ...++..|..++.++|++|.+
T Consensus       449 ~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~---~pv~~--~~~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  449 TIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE---EPVEY--VYRFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             CCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC---CCccc--eeEEEEcCCCCcceeeeeCCC
Confidence            448889999999999999999999999999999999999999876   34444  467888899999999999974


No 27 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=7.9e-35  Score=259.61  Aligned_cols=108  Identities=21%  Similarity=0.375  Sum_probs=90.8

Q ss_pred             CCcceEEEeeehhccCCCCC-CCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHcccc
Q 036917          156 LSGSNIHVNVWAVARDPAVW-KDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWA  234 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~-~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~  234 (280)
                      ||||.|.++.|++|+||++| +||++|+||||++++......++.++|||.|+|.|+|++||++|++++++.++++|+|+
T Consensus       408 pkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~  487 (516)
T PLN03195        408 KAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQ  487 (516)
T ss_pred             CCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeE
Confidence            99999999999999999999 99999999999964322222456799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCceEeeeecC
Q 036917          235 PPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRL  268 (280)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  268 (280)
                      +.++   .++..  ....++.+.+++.|+++||+
T Consensus       488 ~~~~---~~~~~--~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        488 LVPG---HPVKY--RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             ecCC---Cccee--eeeeEEecCCCEEEEEEeCC
Confidence            8765   23322  23455667789999999985


No 28 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.9e-34  Score=256.00  Aligned_cols=226  Identities=21%  Similarity=0.355  Sum_probs=175.7

Q ss_pred             cccccCC-CCchhHHHHHHHHHhCccchH-------------HHHHHHHHHcCCCCCCCCCccccccccCCCCceEEccC
Q 036917           37 VGNLYDI-KPVRFRCFAEWAQQYGQSFRF-------------ELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADY  102 (280)
Q Consensus        37 lG~~~~~-~~~~~~~~~~~~~kyG~v~~~-------------~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~  102 (280)
                      +||+..+ .+..+..+.+|+++||+||++             +.+++++..+...|..++.........  +.++++. +
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~~l~~~-d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GKGLIPA-D  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CCceecC-C
Confidence            4666666 566789999999999999987             889999987777676654322222211  2355544 5


Q ss_pred             CchHHHHHhhhhhcccChHHHhhhhHHHHHHHHHHHHHHhhc--CCCCeee--------------eeec-----------
Q 036917          103 GPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFKD--CTDPHNF--------------VAFT-----------  155 (280)
Q Consensus       103 g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~~~--------------~~~~-----------  155 (280)
                      ++.|+.+|+.++ +.|+...++.+.+.+.+.++.+++.+.+.  .+..+++              ..|+           
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~  297 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTG  297 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchH
Confidence            999999999999 89999999999999999999999888653  2333333              0000           


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil  377 (633)
T PLN02738        298 IVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSIL  377 (633)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHH
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 036917          156 --------------------------------------------------------------------------------  155 (280)
Q Consensus       156 --------------------------------------------------------------------------------  155 (280)
                                                                                                      
T Consensus       378 ~~Ll~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIk  457 (633)
T PLN02738        378 HFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVIN  457 (633)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHH
Confidence                                                                                            


Q ss_pred             ---------------------------CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCc--CCCCCCCccccCCCC
Q 036917          156 ---------------------------LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDV--DMKGHDFRLLPFGAG  206 (280)
Q Consensus       156 ---------------------------pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~--~~~~~~~~~~~Fg~G  206 (280)
                                                 ||||.|.++.|.+|+||++|+||++|+||||+.++.  .....+..++|||.|
T Consensus       458 EtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G  537 (633)
T PLN02738        458 ESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGG  537 (633)
T ss_pred             HHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCC
Confidence                                       999999999999999999999999999999985422  122345689999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHHHccccCCCCCCCCCCCCCCCCCccccccCCceEeeeecCCC
Q 036917          207 RRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLPS  270 (280)
Q Consensus       207 ~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~  270 (280)
                      +|.|+|++||++|++++||.|+++|+|++..+.  .++  ....++++.+.+++.|++++|.+.
T Consensus       538 ~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~--~~~--~~~~~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        538 PRKCVGDMFASFENVVATAMLVRRFDFQLAPGA--PPV--KMTTGATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC--CCc--ccccceEEeeCCCcEEEEEECCCC
Confidence            999999999999999999999999999998763  222  222356677778999999999654


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.3e-33  Score=249.83  Aligned_cols=109  Identities=28%  Similarity=0.473  Sum_probs=92.1

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcC--CCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccc
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVD--MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW  233 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~  233 (280)
                      |+||.|.++.+++|+||++|+||++|+||||+.++..  ....+..++|||.|+|.|+|++||++|++++++.|+++|+|
T Consensus       373 p~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~  452 (489)
T PLN02936        373 NAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDL  452 (489)
T ss_pred             CCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeE
Confidence            9999999999999999999999999999999965432  12234589999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          234 APPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      ++.++   .++...  .++++.+.+++.|+++||.-
T Consensus       453 ~~~~~---~~~~~~--~~~~~~~~~~~~v~~~~R~~  483 (489)
T PLN02936        453 ELVPD---QDIVMT--TGATIHTTNGLYMTVSRRRV  483 (489)
T ss_pred             EecCC---Ccccee--cceEEeeCCCeEEEEEeeeC
Confidence            98876   333322  34666677899999999853


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.97  E-value=8.1e-31  Score=232.20  Aligned_cols=111  Identities=24%  Similarity=0.429  Sum_probs=92.3

Q ss_pred             CCcceEEEeeehhccCCCCC-CCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHcccc
Q 036917          156 LSGSNIHVNVWAVARDPAVW-KDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWA  234 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~-~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~  234 (280)
                      ||||.|.++.|++||||++| +||++|+||||++++......++.++|||.|+|.|+|++||++|++++++.++++|+|+
T Consensus       390 p~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~  469 (502)
T PLN02426        390 AKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIE  469 (502)
T ss_pred             CCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEE
Confidence            99999999999999999999 99999999999974322223456799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCceEeeeecCC
Q 036917          235 PPEGVKPEEIDMSENPGLVTYMKTPLQAVPTPRLP  269 (280)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  269 (280)
                      +.++.  .+ ......++++.+.+++.|++++|+.
T Consensus       470 ~~~~~--~~-~~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        470 VVGRS--NR-APRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             EecCC--CC-CCcccceeEEecCCCEEEEEEEccC
Confidence            86542  11 1122235677888999999999964


No 31 
>PLN02648 allene oxide synthase
Probab=99.96  E-value=8.8e-29  Score=216.75  Aligned_cols=83  Identities=20%  Similarity=0.333  Sum_probs=69.3

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCC------CCCccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKG------HDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLH  229 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~------~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~  229 (280)
                      |||+.|+++.+++|+||++|+||++|+||||++++.....      .....++||+|+|.|+|++||++|++++++.|++
T Consensus       373 pkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~  452 (480)
T PLN02648        373 KKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFL  452 (480)
T ss_pred             CCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999875432110      0112333477889999999999999999999999


Q ss_pred             Hcc-ccCCCC
Q 036917          230 HFA-WAPPEG  238 (280)
Q Consensus       230 ~f~-~~~~~~  238 (280)
                      +|+ |++.++
T Consensus       453 ~f~~~~l~~~  462 (480)
T PLN02648        453 RYDSFEIEVD  462 (480)
T ss_pred             HhCEEeecCC
Confidence            998 998877


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92  E-value=2.3e-24  Score=186.46  Aligned_cols=96  Identities=29%  Similarity=0.384  Sum_probs=80.8

Q ss_pred             CCcceEEEeeehhccCCCCCCCCCCCCCCcccccCcCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHccccC
Q 036917          156 LSGSNIHVNVWAVARDPAVWKDPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP  235 (280)
Q Consensus       156 pkgt~v~~~~~~~~~d~~~~~~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~  235 (280)
                      |||+.|+++.++.||||+.|++|++|||+||.          ..|+|||+|+|.|+|++||++|++++++.++++|++..
T Consensus       315 p~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~  384 (411)
T COG2124         315 PAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLL  384 (411)
T ss_pred             CCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhh
Confidence            99999999999999999999999999999996          47999999999999999999999999999999999988


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCceEeeeec
Q 036917          236 PEGVKPEEIDMSENPGLVTYMKTPLQAVPTPR  267 (280)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  267 (280)
                      ..++  ....    ...+..+.++..+.++.|
T Consensus       385 ~~~~--~~~~----~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         385 LAEP--PPLV----RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cCCC--CCcc----ccccccCCCcceeeeecC
Confidence            7651  1111    234444556666666654


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=64.41  E-value=5  Score=24.33  Aligned_cols=9  Identities=33%  Similarity=0.671  Sum_probs=6.7

Q ss_pred             CCCCccccc
Q 036917          181 FRPERFFEE  189 (280)
Q Consensus       181 F~peR~l~~  189 (280)
                      -||||||.-
T Consensus        43 PDPERWLP~   51 (59)
T PF08492_consen   43 PDPERWLPK   51 (59)
T ss_pred             CCccccCch
Confidence            389999853


No 34 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=52.51  E-value=19  Score=23.63  Aligned_cols=8  Identities=38%  Similarity=0.845  Sum_probs=5.4

Q ss_pred             CCCCCccc
Q 036917           31 PRPLPIVG   38 (280)
Q Consensus        31 P~~~p~lG   38 (280)
                      |-.-|+||
T Consensus        64 PIYrPvI~   71 (94)
T PF05393_consen   64 PIYRPVIG   71 (94)
T ss_pred             Cccccccc
Confidence            45567887


No 35 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=50.49  E-value=16  Score=26.29  Aligned_cols=21  Identities=19%  Similarity=0.561  Sum_probs=15.1

Q ss_pred             CCccHHHHHHHHHHHHHHHHH
Q 036917          209 VCPGAQLGINLVTSMLGHLLH  229 (280)
Q Consensus       209 ~C~G~~~A~~e~~~~l~~ll~  229 (280)
                      .|.|++||..++-.+|..++.
T Consensus        19 N~~gKKFsE~QiN~FIs~lIt   39 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLIT   39 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHhc
Confidence            499999999999999999964


No 36 
>PHA02902 putative IMV membrane protein; Provisional
Probab=47.47  E-value=46  Score=20.38  Aligned_cols=11  Identities=27%  Similarity=0.453  Sum_probs=4.4

Q ss_pred             CCCCCCCccccc
Q 036917           29 PGPRPLPIVGNL   40 (280)
Q Consensus        29 PgP~~~p~lG~~   40 (280)
                      |+-...+ +|..
T Consensus        33 P~~~d~~-~~~~   43 (70)
T PHA02902         33 PDDRDER-FGDT   43 (70)
T ss_pred             CCCcccc-cccc
Confidence            4433333 4443


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=37.60  E-value=16  Score=21.57  Aligned_cols=11  Identities=45%  Similarity=0.948  Sum_probs=9.3

Q ss_pred             ccCCCCCCCCc
Q 036917          201 LPFGAGRRVCP  211 (280)
Q Consensus       201 ~~Fg~G~r~C~  211 (280)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999986


No 38 
>PF15050 SCIMP:  SCIMP protein
Probab=35.21  E-value=66  Score=22.61  Aligned_cols=17  Identities=29%  Similarity=0.393  Sum_probs=11.6

Q ss_pred             CCCCCCCC-CCCcccccc
Q 036917           25 FNLPPGPR-PLPIVGNLY   41 (280)
Q Consensus        25 ~~~pPgP~-~~p~lG~~~   41 (280)
                      ..+||.|+ +.++.|+..
T Consensus        67 ~~LPpLPPRg~~s~~~~s   84 (133)
T PF15050_consen   67 VQLPPLPPRGSPSPEDSS   84 (133)
T ss_pred             CCCCCCCCCCCCCccccC
Confidence            45777755 678888763


No 39 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=32.90  E-value=76  Score=23.58  Aligned_cols=19  Identities=26%  Similarity=0.466  Sum_probs=10.7

Q ss_pred             HHHHHHhcCCCCCCCCCCC
Q 036917           15 LAYKLYQRLRFNLPPGPRP   33 (280)
Q Consensus        15 ~~~~~~~~~~~~~pPgP~~   33 (280)
                      +++++.+++..+.||-|.+
T Consensus       166 L~~~F~RR~~rrsppepsg  184 (215)
T PF05084_consen  166 LTWFFLRRTGRRSPPEPSG  184 (215)
T ss_pred             HHHHHHHhhccCCCCCCCC
Confidence            3334444555677777763


No 40 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=27.93  E-value=42  Score=22.05  Aligned_cols=21  Identities=10%  Similarity=0.301  Sum_probs=18.6

Q ss_pred             HHHHHHHHHHHHHccccCCCC
Q 036917          218 NLVTSMLGHLLHHFAWAPPEG  238 (280)
Q Consensus       218 ~e~~~~l~~ll~~f~~~~~~~  238 (280)
                      ..|+-++..+|+-|||.|+..
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            568889999999999999875


No 41 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=27.48  E-value=44  Score=24.26  Aligned_cols=14  Identities=36%  Similarity=0.384  Sum_probs=5.6

Q ss_pred             HHHHHHHHHHHhcC
Q 036917           10 IIFIILAYKLYQRL   23 (280)
Q Consensus        10 ~~~~~~~~~~~~~~   23 (280)
                      +++++++.++..++
T Consensus        42 iiiiivli~lcssR   55 (189)
T PF05568_consen   42 IIIIIVLIYLCSSR   55 (189)
T ss_pred             HHHHHHHHHHHhhh
Confidence            33344444443333


No 42 
>PF02663 FmdE:  FmdE, Molybdenum formylmethanofuran dehydrogenase operon ;  InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].  This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=27.00  E-value=57  Score=23.33  Aligned_cols=20  Identities=35%  Similarity=0.748  Sum_probs=16.2

Q ss_pred             CCCccHHHHHHHHHHHHHHH
Q 036917          208 RVCPGAQLGINLVTSMLGHL  227 (280)
Q Consensus       208 r~C~G~~~A~~e~~~~l~~l  227 (280)
                      |.|||.-+++.....++..|
T Consensus         5 H~Cpgl~~G~r~~~~a~~~l   24 (131)
T PF02663_consen    5 HLCPGLALGYRMAKYALEEL   24 (131)
T ss_dssp             S--HHHHHHHHHHHHHHHHH
T ss_pred             CcCccHHHHHHHHHHHHHHc
Confidence            78999999999998888887


No 43 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=23.72  E-value=23  Score=26.70  Aligned_cols=35  Identities=31%  Similarity=0.517  Sum_probs=24.4

Q ss_pred             CCCCCCcccccCcCCCCCCCccccCCCCCCCCccH
Q 036917          179 LEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPGA  213 (280)
Q Consensus       179 ~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  213 (280)
                      -+|+|++|-.==-.........+-|..|+-.|-|.
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGa   69 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGA   69 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEecc
Confidence            47999998432112222445799999999999994


No 44 
>PF06129 Chordopox_G3:  Chordopoxvirus G3 protein;  InterPro: IPR010367 This family consists of several poxvirus specific G3 proteins. The function of this family is unknown.
Probab=21.73  E-value=89  Score=21.68  Aligned_cols=21  Identities=29%  Similarity=0.467  Sum_probs=13.6

Q ss_pred             CccchHHHHHHHHHHHHHHHh
Q 036917            1 MALPLIPLSIIFIILAYKLYQ   21 (280)
Q Consensus         1 m~~~~~~~l~~~~~~~~~~~~   21 (280)
                      |+++.+++++++++..|+...
T Consensus         1 m~ll~l~ffi~Fl~~~Y~~~y   21 (109)
T PF06129_consen    1 MWLLYLIFFILFLVLCYFFNY   21 (109)
T ss_pred             CcHHHHHHHHHHHHHHHHHhh
Confidence            666777777776666665543


No 45 
>PF15442 DUF4629:  Domain of unknown function (DUF4629)
Probab=21.30  E-value=42  Score=24.63  Aligned_cols=10  Identities=30%  Similarity=0.694  Sum_probs=8.6

Q ss_pred             CCCCCccHHH
Q 036917          206 GRRVCPGAQL  215 (280)
Q Consensus       206 G~r~C~G~~~  215 (280)
                      =||.|+|+++
T Consensus       127 kPRs~LgMHM  136 (150)
T PF15442_consen  127 KPRSCLGMHM  136 (150)
T ss_pred             CcccccchHH
Confidence            4899999986


No 46 
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=20.11  E-value=26  Score=26.92  Aligned_cols=36  Identities=28%  Similarity=0.551  Sum_probs=22.7

Q ss_pred             CCCCCCCCcccccCcCCCCCCCccccCCCCCCCCcc
Q 036917          177 DPLEFRPERFFEEDVDMKGHDFRLLPFGAGRRVCPG  212 (280)
Q Consensus       177 ~~~~F~peR~l~~~~~~~~~~~~~~~Fg~G~r~C~G  212 (280)
                      .--+|+|.||-.==-...+..-...-|+.|+=.|-|
T Consensus        48 ~N~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctg   83 (200)
T KOG3302|consen   48 RNAEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTG   83 (200)
T ss_pred             cccccCcccccEEEEEEcCCceEEEEecCCcEEEec
Confidence            445799999842111111222356789999999998


Done!