Query 036921
Match_columns 527
No_of_seqs 196 out of 1437
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:59:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036921.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036921hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3khd_A Pyruvate kinase; malari 100.0 8E-138 3E-142 1108.5 50.0 490 4-526 23-520 (520)
2 3gg8_A Pyruvate kinase; malari 100.0 2E-135 7E-140 1089.2 53.9 488 7-526 14-511 (511)
3 4drs_A Pyruvate kinase; glycol 100.0 1E-134 4E-139 1089.3 55.5 486 12-526 27-526 (526)
4 3gr4_A Pyruvate kinase isozyme 100.0 2E-133 7E-138 1080.4 55.6 478 23-526 57-550 (550)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 9E-134 3E-138 1075.5 51.7 476 23-526 15-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 2E-131 7E-136 1079.1 52.2 472 23-527 18-495 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 2E-130 7E-135 1046.8 52.0 463 27-525 1-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 3E-127 1E-131 1048.7 54.7 468 27-526 2-475 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 6E-127 2E-131 1011.7 47.6 442 26-523 13-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 3E-125 9E-130 1014.8 47.6 475 25-525 16-500 (500)
11 1izc_A Macrophomate synthase i 99.7 2.3E-18 7.8E-23 178.0 6.2 149 210-374 108-302 (339)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.6 1.7E-16 5.7E-21 160.8 7.0 128 208-350 100-261 (287)
13 2vws_A YFAU, 2-keto-3-deoxy su 99.6 1.9E-16 6.4E-21 158.8 6.8 127 209-350 80-240 (267)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 6.5E-16 2.2E-20 154.4 9.7 127 210-350 79-239 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 9.7E-16 3.3E-20 152.7 8.8 125 209-350 81-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.5 7.8E-15 2.7E-19 148.2 9.7 133 206-347 81-221 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.3 9.8E-12 3.3E-16 127.7 9.9 135 201-347 117-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 5.4E-11 1.8E-15 121.9 9.7 132 205-346 113-255 (316)
19 3qqw_A Putative citrate lyase; 99.1 4.4E-10 1.5E-14 115.9 11.5 135 205-347 94-255 (332)
20 1u5h_A CITE; TIM barrel, struc 99.0 4.4E-10 1.5E-14 112.8 9.4 125 206-347 71-209 (273)
21 2ols_A Phosphoenolpyruvate syn 99.0 4.8E-10 1.6E-14 127.7 9.9 135 204-349 622-779 (794)
22 3r4i_A Citrate lyase; TIM beta 99.0 7.4E-10 2.5E-14 114.5 8.4 134 207-346 95-253 (339)
23 2hwg_A Phosphoenolpyruvate-pro 98.9 3.4E-09 1.2E-13 116.3 10.7 134 203-348 368-527 (575)
24 2wqd_A Phosphoenolpyruvate-pro 98.9 3.6E-09 1.2E-13 116.1 10.0 132 204-347 371-528 (572)
25 3oyz_A Malate synthase; TIM ba 98.8 9.6E-09 3.3E-13 108.2 9.9 134 205-347 94-259 (433)
26 3cuz_A MSA, malate synthase A; 98.3 9.5E-06 3.3E-10 87.8 16.0 255 18-359 79-371 (532)
27 1vbg_A Pyruvate,orthophosphate 98.3 1.1E-06 3.7E-11 100.7 8.9 137 202-349 680-862 (876)
28 1kbl_A PPDK, pyruvate phosphat 98.2 2.8E-06 9.5E-11 97.3 9.0 136 202-348 673-855 (873)
29 3cux_A Malate synthase; TIM ba 97.7 0.00018 6.1E-09 77.9 11.9 123 218-347 202-364 (528)
30 1p7t_A MSG, malate synthase G; 97.6 8.2E-05 2.8E-09 82.1 7.3 135 208-347 371-536 (731)
31 1h6z_A Pyruvate phosphate diki 97.3 0.0016 5.5E-08 74.7 13.6 139 199-348 697-881 (913)
32 2x0s_A Pyruvate phosphate diki 95.9 0.055 1.9E-06 62.5 13.6 115 223-348 727-881 (913)
33 1jqo_A Phosphoenolpyruvate car 95.1 0.07 2.4E-06 61.5 10.6 108 220-327 528-653 (970)
34 4af0_A Inosine-5'-monophosphat 94.9 0.43 1.5E-05 51.7 15.2 125 204-347 278-413 (556)
35 3odm_A Pepcase, PEPC, phosphoe 94.7 0.048 1.7E-06 58.8 7.2 108 219-326 138-274 (560)
36 1jqn_A Pepcase, PEPC, phosphoe 94.2 0.058 2E-06 61.8 6.8 152 219-370 467-638 (883)
37 3f4w_A Putative hexulose 6 pho 93.6 0.4 1.4E-05 44.8 10.5 134 212-368 70-208 (211)
38 1vp8_A Hypothetical protein AF 93.2 2.6 9E-05 39.6 15.0 119 393-514 27-167 (201)
39 4fo4_A Inosine 5'-monophosphat 92.7 2 7E-05 44.3 15.1 120 208-347 109-240 (366)
40 3ble_A Citramalate synthase fr 92.6 2 6.9E-05 43.6 14.8 159 203-370 37-211 (337)
41 1ydn_A Hydroxymethylglutaryl-C 92.5 1.7 6E-05 43.0 13.9 155 204-369 23-196 (295)
42 3usb_A Inosine-5'-monophosphat 91.6 2 6.7E-05 46.3 14.0 126 205-348 254-389 (511)
43 3inp_A D-ribulose-phosphate 3- 91.4 0.78 2.7E-05 44.8 9.6 138 211-367 101-243 (246)
44 1t57_A Conserved protein MTH16 91.1 5.3 0.00018 37.7 14.3 119 393-514 35-174 (206)
45 4avf_A Inosine-5'-monophosphat 90.9 1.8 6E-05 46.4 12.6 123 206-347 228-361 (490)
46 3khj_A Inosine-5-monophosphate 90.8 3.1 0.00011 42.7 14.0 118 209-347 107-236 (361)
47 3ovp_A Ribulose-phosphate 3-ep 90.7 0.55 1.9E-05 45.2 7.7 132 216-370 83-220 (228)
48 1h1y_A D-ribulose-5-phosphate 90.6 1.7 5.7E-05 41.4 11.0 133 215-368 82-222 (228)
49 4fxs_A Inosine-5'-monophosphat 90.5 3.1 0.0001 44.6 14.1 123 206-347 230-363 (496)
50 2ftp_A Hydroxymethylglutaryl-C 90.4 4.3 0.00015 40.4 14.2 169 188-369 16-200 (302)
51 3ffs_A Inosine-5-monophosphate 90.3 1.6 5.6E-05 45.5 11.4 117 210-347 147-275 (400)
52 1ydo_A HMG-COA lyase; TIM-barr 90.3 8 0.00027 38.7 16.1 159 203-369 24-198 (307)
53 3eeg_A 2-isopropylmalate synth 90.1 6.8 0.00023 39.6 15.5 167 189-370 15-193 (325)
54 3rmj_A 2-isopropylmalate synth 89.7 11 0.00039 38.7 17.0 167 189-370 21-199 (370)
55 1gte_A Dihydropyrimidine dehyd 89.5 2 6.9E-05 50.1 12.5 126 206-348 647-817 (1025)
56 2fli_A Ribulose-phosphate 3-ep 89.3 2.8 9.4E-05 39.2 11.3 133 215-366 79-217 (220)
57 2cw6_A Hydroxymethylglutaryl-C 89.3 2.5 8.5E-05 42.1 11.5 170 189-370 14-198 (298)
58 3ctl_A D-allulose-6-phosphate 89.2 2.6 8.9E-05 40.6 11.1 134 216-368 76-218 (231)
59 3ewb_X 2-isopropylmalate synth 89.1 18 0.00063 35.8 17.6 167 188-369 13-191 (293)
60 2z6i_A Trans-2-enoyl-ACP reduc 88.9 2.8 9.6E-05 42.3 11.7 105 215-347 83-191 (332)
61 1jcn_A Inosine monophosphate d 88.7 6.1 0.00021 42.2 14.8 122 208-348 256-388 (514)
62 1p1x_A Deoxyribose-phosphate a 88.4 2.1 7.3E-05 42.1 10.0 148 202-369 23-192 (260)
63 3r2g_A Inosine 5'-monophosphat 88.3 4.2 0.00014 41.9 12.5 121 206-347 99-228 (361)
64 1tqj_A Ribulose-phosphate 3-ep 87.6 0.88 3E-05 43.7 6.6 130 215-365 80-219 (230)
65 3cu2_A Ribulose-5-phosphate 3- 87.4 2.5 8.5E-05 40.9 9.6 136 210-366 83-235 (237)
66 3igs_A N-acetylmannosamine-6-p 87.2 5.7 0.0002 38.1 12.1 133 209-369 91-229 (232)
67 3bo9_A Putative nitroalkan dio 86.6 5.7 0.0002 39.9 12.3 106 215-347 97-205 (326)
68 1n7k_A Deoxyribose-phosphate a 86.4 2.1 7.2E-05 41.5 8.5 141 202-368 31-192 (234)
69 1w8s_A FBP aldolase, fructose- 86.1 8.1 0.00028 37.7 12.7 128 205-347 39-179 (263)
70 3qja_A IGPS, indole-3-glycerol 85.8 7 0.00024 38.5 12.2 126 215-365 130-260 (272)
71 1y0e_A Putative N-acetylmannos 85.6 8.3 0.00028 35.9 12.2 134 210-365 79-219 (223)
72 3q58_A N-acetylmannosamine-6-p 85.6 4.2 0.00014 39.0 10.1 129 209-365 91-225 (229)
73 3ajx_A 3-hexulose-6-phosphate 85.6 3.1 0.00011 38.4 9.1 129 215-365 72-204 (207)
74 1vhc_A Putative KHG/KDPG aldol 85.3 4.3 0.00015 38.8 10.0 108 205-346 27-136 (224)
75 3jr2_A Hexulose-6-phosphate sy 85.2 2.3 7.8E-05 40.1 8.0 130 215-368 78-214 (218)
76 3nvt_A 3-deoxy-D-arabino-heptu 84.6 5.6 0.00019 41.3 11.2 107 215-347 164-283 (385)
77 3g8r_A Probable spore coat pol 84.5 8.5 0.00029 39.4 12.3 95 232-356 77-174 (350)
78 1f76_A Dihydroorotate dehydrog 84.4 11 0.00039 37.6 13.3 115 218-347 163-318 (336)
79 4e38_A Keto-hydroxyglutarate-a 84.2 5.5 0.00019 38.4 10.2 103 224-346 37-153 (232)
80 1rpx_A Protein (ribulose-phosp 83.8 5.5 0.00019 37.5 10.1 135 211-365 83-225 (230)
81 1at0_A 17-hedgehog; developmen 83.5 4.1 0.00014 36.2 8.5 66 108-185 58-134 (145)
82 4g9p_A 4-hydroxy-3-methylbut-2 83.5 6.6 0.00023 40.9 11.0 97 209-312 41-142 (406)
83 1nvm_A HOA, 4-hydroxy-2-oxoval 83.5 15 0.00053 37.1 13.9 149 204-370 27-191 (345)
84 1geq_A Tryptophan synthase alp 83.3 15 0.00052 34.8 13.1 118 210-347 99-220 (248)
85 1zco_A 2-dehydro-3-deoxyphosph 83.1 15 0.00051 35.9 13.0 119 215-359 45-178 (262)
86 3vnd_A TSA, tryptophan synthas 83.0 5.1 0.00018 39.4 9.7 115 215-347 118-235 (267)
87 1mxs_A KDPG aldolase; 2-keto-3 82.5 14 0.00049 35.2 12.4 107 206-346 37-145 (225)
88 1vcv_A Probable deoxyribose-ph 82.3 1.8 6.3E-05 41.7 6.0 150 202-371 12-182 (226)
89 1ub3_A Aldolase protein; schif 82.3 1.3 4.4E-05 42.6 4.9 144 202-367 14-173 (220)
90 1jub_A Dihydroorotate dehydrog 82.0 9.2 0.00032 37.8 11.3 146 206-372 105-291 (311)
91 3bw2_A 2-nitropropane dioxygen 81.7 17 0.00059 36.9 13.5 106 215-347 117-237 (369)
92 2gjl_A Hypothetical protein PA 81.7 11 0.00037 37.7 11.8 105 215-347 91-201 (328)
93 1wbh_A KHG/KDPG aldolase; lyas 81.6 11 0.00039 35.5 11.3 108 205-346 26-135 (214)
94 1wa3_A 2-keto-3-deoxy-6-phosph 81.4 13 0.00044 34.2 11.4 107 205-347 20-131 (205)
95 3nav_A Tryptophan synthase alp 81.0 7.3 0.00025 38.4 9.9 113 215-347 120-237 (271)
96 1vs1_A 3-deoxy-7-phosphoheptul 80.7 15 0.00052 36.2 12.2 105 232-362 88-196 (276)
97 1yad_A Regulatory protein TENI 80.7 26 0.00089 32.5 13.5 129 216-368 84-213 (221)
98 1eep_A Inosine 5'-monophosphat 80.5 13 0.00044 38.4 12.2 119 208-347 154-285 (404)
99 3oa3_A Aldolase; structural ge 80.0 3.4 0.00012 41.2 7.1 145 202-368 69-229 (288)
100 2qjg_A Putative aldolase MJ040 79.9 41 0.0014 32.2 15.0 128 215-369 107-259 (273)
101 3ivs_A Homocitrate synthase, m 79.7 32 0.0011 36.0 14.9 165 187-369 46-221 (423)
102 1tqx_A D-ribulose-5-phosphate 79.2 5.4 0.00019 38.2 8.2 128 221-368 86-222 (227)
103 2c6q_A GMP reductase 2; TIM ba 79.0 24 0.00083 35.8 13.5 122 208-348 119-253 (351)
104 2wqp_A Polysialic acid capsule 78.7 18 0.0006 37.1 12.1 98 231-357 89-188 (349)
105 2ekc_A AQ_1548, tryptophan syn 78.7 9.3 0.00032 37.2 9.8 112 215-347 117-234 (262)
106 3kws_A Putative sugar isomeras 78.5 24 0.00081 33.7 12.7 148 208-361 39-214 (287)
107 4fxs_A Inosine-5'-monophosphat 77.7 4.7 0.00016 43.1 8.0 53 27-79 217-269 (496)
108 1vrd_A Inosine-5'-monophosphat 77.1 27 0.00091 36.9 13.6 120 209-347 239-369 (494)
109 3tha_A Tryptophan synthase alp 76.9 9.9 0.00034 37.1 9.3 112 215-347 111-227 (252)
110 3ngj_A Deoxyribose-phosphate a 76.1 7.3 0.00025 37.8 8.0 148 202-367 38-197 (239)
111 2h6r_A Triosephosphate isomera 75.7 6.3 0.00021 37.4 7.4 127 216-363 78-215 (219)
112 3r12_A Deoxyribose-phosphate a 75.5 7 0.00024 38.4 7.8 144 202-367 54-213 (260)
113 1ep3_A Dihydroorotate dehydrog 75.0 25 0.00087 34.3 12.0 130 206-353 110-276 (311)
114 1qop_A Tryptophan synthase alp 74.5 9.5 0.00033 37.1 8.6 112 215-347 117-234 (268)
115 3dwg_A Cysteine synthase B; su 74.4 18 0.00063 36.1 10.9 120 295-440 84-212 (325)
116 1zfj_A Inosine monophosphate d 73.2 49 0.0017 34.7 14.5 123 207-347 233-365 (491)
117 1q6o_A Humps, 3-keto-L-gulonat 72.5 12 0.0004 35.0 8.5 129 217-368 77-212 (216)
118 1ypf_A GMP reductase; GUAC, pu 72.2 17 0.00058 36.6 10.1 121 206-348 105-240 (336)
119 1xi3_A Thiamine phosphate pyro 72.2 26 0.00088 32.0 10.7 123 216-368 82-211 (215)
120 3ngf_A AP endonuclease, family 71.5 39 0.0013 31.9 12.2 134 207-349 23-185 (269)
121 2qr6_A IMP dehydrogenase/GMP r 71.3 35 0.0012 34.9 12.4 109 217-348 175-307 (393)
122 2yw3_A 4-hydroxy-2-oxoglutarat 71.1 29 0.00098 32.4 10.8 97 214-346 32-130 (207)
123 1ka9_F Imidazole glycerol phos 70.9 23 0.00079 33.4 10.3 131 210-362 88-241 (252)
124 2e6f_A Dihydroorotate dehydrog 70.7 17 0.00057 35.9 9.5 146 206-372 105-293 (314)
125 1mzh_A Deoxyribose-phosphate a 70.7 64 0.0022 30.4 13.3 144 202-365 15-170 (225)
126 1thf_D HISF protein; thermophI 70.5 17 0.00057 34.4 9.2 132 210-363 87-241 (253)
127 3exr_A RMPD (hexulose-6-phosph 69.8 43 0.0015 31.6 11.8 133 217-368 79-217 (221)
128 2v82_A 2-dehydro-3-deoxy-6-pho 68.9 44 0.0015 30.6 11.5 125 211-370 72-203 (212)
129 3zwt_A Dihydroorotate dehydrog 68.8 39 0.0013 34.6 12.0 119 218-348 174-328 (367)
130 3cqj_A L-ribulose-5-phosphate 68.7 30 0.001 33.2 10.7 126 214-350 37-197 (295)
131 3tsm_A IGPS, indole-3-glycerol 68.4 36 0.0012 33.4 11.2 123 215-364 137-266 (272)
132 1me8_A Inosine-5'-monophosphat 67.1 63 0.0022 34.3 13.7 119 210-347 245-381 (503)
133 1jcn_A Inosine monophosphate d 67.0 9.7 0.00033 40.7 7.3 51 29-79 243-293 (514)
134 2tps_A Protein (thiamin phosph 66.1 77 0.0026 29.1 12.7 123 216-369 90-222 (227)
135 1h1y_A D-ribulose-5-phosphate 66.1 48 0.0016 31.0 11.3 131 209-368 22-169 (228)
136 3rcm_A TATD family hydrolase; 65.6 31 0.0011 33.9 10.2 104 207-314 17-135 (287)
137 3vnd_A TSA, tryptophan synthas 65.6 17 0.00057 35.7 8.1 92 208-312 34-153 (267)
138 4fo4_A Inosine 5'-monophosphat 65.2 10 0.00034 39.0 6.7 49 31-79 98-146 (366)
139 3m47_A Orotidine 5'-phosphate 64.9 34 0.0012 32.4 10.0 125 217-368 88-223 (228)
140 4ef8_A Dihydroorotate dehydrog 64.8 34 0.0011 34.9 10.5 115 218-347 153-306 (354)
141 3ndz_A Endoglucanase D; cellot 64.7 13 0.00046 37.3 7.5 57 37-95 39-105 (345)
142 3sz8_A 2-dehydro-3-deoxyphosph 64.6 51 0.0018 32.6 11.4 106 217-348 48-169 (285)
143 3usb_A Inosine-5'-monophosphat 64.6 10 0.00035 40.7 6.8 54 26-79 241-294 (511)
144 1ujp_A Tryptophan synthase alp 63.9 16 0.00053 35.9 7.5 113 215-347 114-229 (271)
145 3fs2_A 2-dehydro-3-deoxyphosph 63.8 54 0.0018 32.7 11.4 104 218-347 70-189 (298)
146 4avf_A Inosine-5'-monophosphat 63.5 11 0.00038 40.1 6.9 53 27-79 215-267 (490)
147 3lab_A Putative KDPG (2-keto-3 63.4 27 0.00094 33.2 8.9 38 297-347 96-139 (217)
148 1wv2_A Thiazole moeity, thiazo 63.0 1.2E+02 0.004 29.7 14.9 142 205-368 85-237 (265)
149 1tvn_A Cellulase, endoglucanas 62.3 12 0.00042 36.3 6.5 54 40-95 38-101 (293)
150 4aec_A Cysteine synthase, mito 62.0 44 0.0015 35.0 11.0 122 296-440 187-315 (430)
151 1ko7_A HPR kinase/phosphatase; 61.9 7 0.00024 39.4 4.7 86 249-354 48-157 (314)
152 1yxy_A Putative N-acetylmannos 61.9 38 0.0013 31.6 9.7 131 209-366 91-231 (234)
153 1vr6_A Phospho-2-dehydro-3-deo 61.2 37 0.0013 34.7 9.9 89 232-346 156-246 (350)
154 4af0_A Inosine-5'-monophosphat 61.2 9 0.00031 41.5 5.5 60 20-79 259-319 (556)
155 2nv1_A Pyridoxal biosynthesis 61.0 75 0.0026 31.2 12.1 122 215-369 36-173 (305)
156 1h5y_A HISF; histidine biosynt 60.9 36 0.0012 31.6 9.4 68 263-349 157-229 (253)
157 3icg_A Endoglucanase D; cellul 60.7 15 0.00052 39.1 7.4 55 40-96 45-109 (515)
158 3daq_A DHDPS, dihydrodipicolin 60.6 68 0.0023 31.4 11.6 94 214-313 30-135 (292)
159 1vli_A Spore coat polysacchari 60.6 24 0.00083 36.5 8.5 87 233-346 101-191 (385)
160 3fkr_A L-2-keto-3-deoxyarabona 60.1 48 0.0017 32.9 10.5 96 214-314 36-145 (309)
161 3khj_A Inosine-5-monophosphate 60.1 12 0.00041 38.3 6.1 46 32-79 98-143 (361)
162 3ndo_A Deoxyribose-phosphate a 60.1 15 0.00051 35.4 6.4 146 202-368 24-188 (231)
163 2ztj_A Homocitrate synthase; ( 59.7 1.6E+02 0.0054 30.1 18.4 164 189-369 12-185 (382)
164 3qja_A IGPS, indole-3-glycerol 59.6 44 0.0015 32.6 10.0 100 216-348 81-190 (272)
165 3ks6_A Glycerophosphoryl diest 59.4 27 0.00091 33.4 8.2 105 221-366 133-244 (250)
166 2czd_A Orotidine 5'-phosphate 59.1 36 0.0012 31.5 8.8 125 211-367 70-205 (208)
167 3m5v_A DHDPS, dihydrodipicolin 59.0 67 0.0023 31.7 11.3 90 273-371 42-134 (301)
168 2cu0_A Inosine-5'-monophosphat 58.9 1E+02 0.0035 32.4 13.4 118 209-348 230-358 (486)
169 3qze_A DHDPS, dihydrodipicolin 58.5 66 0.0023 32.0 11.2 94 214-313 51-156 (314)
170 3tml_A 2-dehydro-3-deoxyphosph 58.4 51 0.0018 32.7 10.2 106 217-348 45-172 (288)
171 3dx5_A Uncharacterized protein 58.1 82 0.0028 29.7 11.5 117 214-337 22-162 (286)
172 1egz_A Endoglucanase Z, EGZ, C 58.0 13 0.00043 36.1 5.7 53 41-95 39-99 (291)
173 3qc0_A Sugar isomerase; TIM ba 58.0 14 0.00048 34.8 5.9 122 214-337 25-168 (275)
174 3t05_A Pyruvate kinase, PK; te 57.8 1.7E+02 0.0058 32.0 15.0 97 205-306 217-358 (606)
175 3f2b_A DNA-directed DNA polyme 57.8 2.3E+02 0.008 33.0 16.8 123 214-340 139-350 (1041)
176 3s5o_A 4-hydroxy-2-oxoglutarat 57.7 74 0.0025 31.5 11.4 95 214-313 42-149 (307)
177 3kts_A Glycerol uptake operon 57.5 75 0.0026 29.6 10.6 142 251-438 10-156 (192)
178 1rd5_A Tryptophan synthase alp 57.4 40 0.0014 32.3 9.1 113 216-347 114-230 (262)
179 1vzw_A Phosphoribosyl isomeras 57.3 24 0.00081 33.3 7.4 120 210-354 88-229 (244)
180 4d9b_A D-cysteine desulfhydras 57.1 1.6E+02 0.0054 29.3 14.3 42 399-440 185-234 (342)
181 1eep_A Inosine 5'-monophosphat 56.9 13 0.00044 38.4 5.8 51 29-79 141-191 (404)
182 2a4a_A Deoxyribose-phosphate a 56.8 38 0.0013 33.5 8.9 151 202-370 43-215 (281)
183 1mdl_A Mandelate racemase; iso 56.7 19 0.00066 36.2 7.0 61 29-94 133-197 (359)
184 3b0p_A TRNA-dihydrouridine syn 56.5 55 0.0019 33.0 10.4 124 207-347 70-225 (350)
185 3l55_A B-1,4-endoglucanase/cel 56.5 17 0.00058 36.9 6.5 57 37-95 49-113 (353)
186 1edg_A Endoglucanase A; family 55.5 21 0.00073 36.1 7.1 57 37-95 58-123 (380)
187 3w01_A Heptaprenylglyceryl pho 55.4 1.5E+02 0.005 28.4 12.7 159 263-461 26-204 (235)
188 3luf_A Two-component system re 55.4 1E+02 0.0035 29.0 11.7 33 304-348 71-104 (259)
189 3o63_A Probable thiamine-phosp 55.3 47 0.0016 31.9 9.2 120 217-369 109-241 (243)
190 1xky_A Dihydrodipicolinate syn 55.1 84 0.0029 31.0 11.2 94 214-313 40-145 (301)
191 3m5v_A DHDPS, dihydrodipicolin 54.6 73 0.0025 31.4 10.7 94 214-313 35-141 (301)
192 3q58_A N-acetylmannosamine-6-p 54.5 1.4E+02 0.0049 28.1 12.7 111 205-346 34-155 (229)
193 3b4u_A Dihydrodipicolinate syn 54.2 1.5E+02 0.0051 28.9 12.9 98 214-313 31-140 (294)
194 3pc3_A CG1753, isoform A; CBS, 54.2 53 0.0018 35.0 10.2 124 297-440 126-256 (527)
195 2ovl_A Putative racemase; stru 54.1 20 0.00067 36.4 6.6 62 29-93 133-198 (371)
196 3i65_A Dihydroorotate dehydrog 54.1 92 0.0032 32.4 11.7 119 217-347 208-374 (415)
197 1xm3_A Thiazole biosynthesis p 54.1 83 0.0029 30.3 10.9 57 305-373 176-233 (264)
198 4f3y_A DHPR, dihydrodipicolina 54.0 1.1E+02 0.0039 29.7 11.8 83 264-374 65-148 (272)
199 3l21_A DHDPS, dihydrodipicolin 53.8 68 0.0023 31.7 10.4 93 214-312 43-146 (304)
200 3oix_A Putative dihydroorotate 53.7 63 0.0021 32.8 10.2 149 205-373 139-325 (345)
201 3l6b_A Serine racemase; pyrido 53.2 1.8E+02 0.0063 28.9 13.7 115 297-440 89-211 (346)
202 2gdq_A YITF; mandelate racemas 53.2 36 0.0012 34.7 8.4 63 29-94 123-192 (382)
203 2p10_A MLL9387 protein; putati 53.1 62 0.0021 32.1 9.6 66 273-347 184-259 (286)
204 2oog_A Glycerophosphoryl diest 53.1 98 0.0034 29.9 11.3 102 222-363 172-278 (287)
205 1aj0_A DHPS, dihydropteroate s 53.0 35 0.0012 33.7 7.9 68 29-98 14-102 (282)
206 3ayr_A Endoglucanase; TIM barr 52.9 28 0.00095 35.2 7.5 54 40-95 62-125 (376)
207 2v03_A Cysteine synthase B; py 52.9 67 0.0023 31.4 10.1 116 298-440 75-200 (303)
208 2wkj_A N-acetylneuraminate lya 52.8 1.3E+02 0.0046 29.5 12.4 94 214-313 39-145 (303)
209 1f6k_A N-acetylneuraminate lya 52.6 1.7E+02 0.0059 28.4 13.2 94 214-313 31-137 (293)
210 2wkj_A N-acetylneuraminate lya 52.3 1.5E+02 0.0051 29.1 12.6 94 267-371 39-137 (303)
211 1tv5_A Dhodehase, dihydroorota 52.1 78 0.0027 33.2 10.9 88 250-349 296-404 (443)
212 1o60_A 2-dehydro-3-deoxyphosph 52.1 85 0.0029 31.0 10.6 89 232-346 75-165 (292)
213 1ve1_A O-acetylserine sulfhydr 51.7 1.7E+02 0.0059 28.3 12.9 116 298-440 76-201 (304)
214 2qkf_A 3-deoxy-D-manno-octulos 51.7 1E+02 0.0036 30.1 11.2 89 232-346 72-162 (280)
215 3si9_A DHDPS, dihydrodipicolin 51.4 86 0.0029 31.2 10.7 94 214-313 50-155 (315)
216 2o55_A Putative glycerophospho 51.3 18 0.00063 34.6 5.5 57 296-368 201-258 (258)
217 3hgm_A Universal stress protei 51.2 23 0.00078 29.7 5.6 40 397-437 98-146 (147)
218 3glc_A Aldolase LSRF; TIM barr 50.8 62 0.0021 32.1 9.4 155 261-438 70-229 (295)
219 1vzw_A Phosphoribosyl isomeras 50.6 22 0.00075 33.5 5.9 120 215-354 40-173 (244)
220 1j0a_A 1-aminocyclopropane-1-c 50.5 68 0.0023 31.6 9.8 124 296-440 84-216 (325)
221 3bdk_A D-mannonate dehydratase 50.1 63 0.0021 33.3 9.6 154 207-363 31-276 (386)
222 2yxg_A DHDPS, dihydrodipicolin 49.9 1.2E+02 0.004 29.6 11.3 94 214-313 28-133 (289)
223 3gg8_A Pyruvate kinase; malari 49.9 2.6E+02 0.0089 29.9 14.5 96 205-305 232-372 (511)
224 2y88_A Phosphoribosyl isomeras 49.8 27 0.00093 32.7 6.4 115 210-349 87-227 (244)
225 2xio_A Putative deoxyribonucle 49.6 30 0.001 33.8 6.9 101 208-314 28-148 (301)
226 3gr4_A Pyruvate kinase isozyme 49.6 1.1E+02 0.0039 33.0 11.8 101 201-306 261-407 (550)
227 2ehh_A DHDPS, dihydrodipicolin 49.6 1.2E+02 0.0043 29.5 11.4 94 214-313 28-133 (294)
228 3i65_A Dihydroorotate dehydrog 49.5 34 0.0012 35.7 7.5 102 202-309 278-402 (415)
229 1rvk_A Isomerase/lactonizing e 49.5 31 0.0011 35.0 7.2 48 44-94 155-208 (382)
230 3lmz_A Putative sugar isomeras 49.5 1.1E+02 0.0038 28.4 10.8 92 209-314 32-134 (257)
231 3tbh_A O-acetyl serine sulfhyd 49.3 88 0.003 31.1 10.4 120 295-440 83-212 (334)
232 1vc4_A Indole-3-glycerol phosp 49.2 52 0.0018 31.7 8.4 124 215-363 123-252 (254)
233 3l12_A Putative glycerophospho 49.1 82 0.0028 31.0 10.1 50 296-365 257-307 (313)
234 2r8w_A AGR_C_1641P; APC7498, d 49.0 1.3E+02 0.0045 30.1 11.7 93 214-312 62-165 (332)
235 4djd_D C/Fe-SP, corrinoid/iron 49.0 1.7E+02 0.0059 29.3 12.4 149 206-369 141-316 (323)
236 1h1n_A Endo type cellulase ENG 48.7 20 0.00069 35.1 5.5 52 42-95 33-94 (305)
237 3h5d_A DHDPS, dihydrodipicolin 48.7 64 0.0022 32.0 9.2 97 210-313 32-141 (311)
238 2nx9_A Oxaloacetate decarboxyl 48.6 2.3E+02 0.0078 29.8 13.9 151 203-370 26-200 (464)
239 2v9d_A YAGE; dihydrodipicolini 48.5 88 0.003 31.5 10.3 94 214-313 59-164 (343)
240 2z08_A Universal stress protei 48.4 38 0.0013 28.2 6.5 41 397-438 87-136 (137)
241 3e96_A Dihydrodipicolinate syn 48.0 1.3E+02 0.0045 29.7 11.5 94 214-313 40-144 (316)
242 1nu5_A Chloromuconate cycloiso 48.0 28 0.00096 35.2 6.6 47 44-93 148-195 (370)
243 1vrd_A Inosine-5'-monophosphat 47.9 23 0.00078 37.4 6.1 50 30-79 226-275 (494)
244 1tzz_A Hypothetical protein L1 47.9 30 0.001 35.4 6.8 47 45-94 172-218 (392)
245 3ipw_A Hydrolase TATD family p 47.7 26 0.00088 35.3 6.1 108 206-314 51-176 (325)
246 4dwd_A Mandelate racemase/muco 47.6 59 0.002 33.4 9.0 64 28-94 124-199 (393)
247 3igs_A N-acetylmannosamine-6-p 47.4 1.9E+02 0.0064 27.3 13.5 111 205-346 34-155 (232)
248 2htm_A Thiazole biosynthesis p 47.3 1.1E+02 0.0037 30.0 10.2 81 273-368 146-228 (268)
249 1tkk_A Similar to chloromucona 47.2 35 0.0012 34.4 7.1 47 44-93 146-192 (366)
250 2ehh_A DHDPS, dihydrodipicolin 47.2 1.6E+02 0.0054 28.8 11.8 94 267-371 28-126 (294)
251 3tva_A Xylose isomerase domain 47.0 1.9E+02 0.0064 27.2 12.9 110 215-337 29-174 (290)
252 3flu_A DHDPS, dihydrodipicolin 47.0 1.8E+02 0.006 28.5 12.1 88 273-371 42-133 (297)
253 2rfg_A Dihydrodipicolinate syn 46.9 1.1E+02 0.0038 30.0 10.6 94 214-313 28-133 (297)
254 2oz8_A MLL7089 protein; struct 46.6 28 0.00096 35.6 6.4 63 29-94 132-198 (389)
255 2yxg_A DHDPS, dihydrodipicolin 45.8 1.7E+02 0.0057 28.5 11.7 94 267-371 28-126 (289)
256 2pqm_A Cysteine synthase; OASS 45.8 1E+02 0.0035 30.8 10.3 117 298-440 92-218 (343)
257 2q02_A Putative cytoplasmic pr 45.8 1.8E+02 0.0063 26.8 12.7 33 214-246 26-64 (272)
258 2r8w_A AGR_C_1641P; APC7498, d 45.6 1.6E+02 0.0054 29.4 11.7 94 267-371 62-160 (332)
259 3khd_A Pyruvate kinase; malari 45.6 2.6E+02 0.009 29.9 13.8 96 205-305 241-381 (520)
260 2v5j_A 2,4-dihydroxyhept-2-ENE 45.6 1.1E+02 0.0039 29.9 10.4 86 238-347 30-118 (287)
261 1f76_A Dihydroorotate dehydrog 45.5 22 0.00076 35.5 5.3 74 203-283 221-322 (336)
262 3qvq_A Phosphodiesterase OLEI0 45.4 36 0.0012 32.5 6.5 102 222-365 145-249 (252)
263 2vc6_A MOSA, dihydrodipicolina 45.3 1.3E+02 0.0045 29.3 10.8 93 214-312 28-131 (292)
264 1z7w_A Cysteine synthase; tran 45.3 1.2E+02 0.0041 29.8 10.6 121 297-440 80-207 (322)
265 3cpr_A Dihydrodipicolinate syn 45.2 1.9E+02 0.0063 28.4 12.0 94 214-313 44-149 (304)
266 3hqn_D Pyruvate kinase, PK; TI 45.2 2.2E+02 0.0076 30.3 13.1 102 200-306 210-357 (499)
267 3tak_A DHDPS, dihydrodipicolin 45.2 1.9E+02 0.0066 28.1 12.0 94 214-313 29-134 (291)
268 3cpr_A Dihydrodipicolinate syn 45.0 2E+02 0.007 28.1 12.2 94 267-371 44-142 (304)
269 3flu_A DHDPS, dihydrodipicolin 44.7 1.6E+02 0.0056 28.7 11.5 94 214-313 35-140 (297)
270 3eul_A Possible nitrate/nitrit 44.5 96 0.0033 25.8 8.6 76 404-500 56-136 (152)
271 3gg7_A Uncharacterized metallo 44.5 35 0.0012 33.0 6.3 96 208-314 15-126 (254)
272 2qdd_A Mandelate racemase/muco 44.5 35 0.0012 34.6 6.7 60 29-93 134-197 (378)
273 1f6k_A N-acetylneuraminate lya 44.5 1.9E+02 0.0064 28.2 11.8 95 266-371 30-130 (293)
274 1xwy_A DNAse TATD, deoxyribonu 44.4 1.3E+02 0.0043 28.1 10.3 101 208-314 20-133 (264)
275 2cks_A Endoglucanase E-5; carb 44.3 34 0.0012 33.4 6.3 53 41-95 43-102 (306)
276 1w8s_A FBP aldolase, fructose- 44.2 48 0.0016 32.1 7.3 47 44-90 96-144 (263)
277 1xky_A Dihydrodipicolinate syn 44.2 1.7E+02 0.0059 28.6 11.5 94 267-371 40-138 (301)
278 1mjh_A Protein (ATP-binding do 44.2 46 0.0016 28.5 6.6 41 397-438 108-157 (162)
279 3hgj_A Chromate reductase; TIM 44.0 2E+02 0.007 28.7 12.3 131 203-347 141-318 (349)
280 3glc_A Aldolase LSRF; TIM barr 44.0 2E+02 0.0067 28.4 11.8 130 216-369 134-279 (295)
281 1ece_A Endocellulase E1; glyco 43.9 17 0.00058 36.1 4.1 52 43-96 47-118 (358)
282 1rpx_A Protein (ribulose-phosp 43.4 1.5E+02 0.0053 27.3 10.6 111 209-347 26-147 (230)
283 1p5j_A L-serine dehydratase; l 43.4 2.3E+02 0.0079 28.5 12.7 116 297-440 106-231 (372)
284 3qfe_A Putative dihydrodipicol 43.2 1.4E+02 0.0047 29.7 10.7 94 214-312 39-144 (318)
285 1y7l_A O-acetylserine sulfhydr 43.0 1.3E+02 0.0043 29.5 10.4 118 298-440 76-204 (316)
286 3sjn_A Mandelate racemase/muco 42.9 42 0.0014 34.1 7.0 49 43-94 151-201 (374)
287 2gou_A Oxidoreductase, FMN-bin 42.9 1.5E+02 0.0051 30.0 11.1 57 273-348 264-323 (365)
288 2v9d_A YAGE; dihydrodipicolini 42.7 1.4E+02 0.0049 30.0 10.8 94 267-371 59-157 (343)
289 3daq_A DHDPS, dihydrodipicolin 42.6 2.5E+02 0.0084 27.3 12.5 94 267-371 30-128 (292)
290 1bxb_A Xylose isomerase; xylos 42.5 2.6E+02 0.0089 28.0 12.9 145 214-362 40-233 (387)
291 3nco_A Endoglucanase fncel5A; 42.5 45 0.0016 32.6 7.0 53 41-95 42-104 (320)
292 2jep_A Xyloglucanase; family 5 42.4 48 0.0016 33.5 7.3 53 41-95 70-132 (395)
293 4h27_A L-serine dehydratase/L- 42.3 1.8E+02 0.0061 29.3 11.6 115 297-439 106-230 (364)
294 3b4u_A Dihydrodipicolinate syn 42.1 1.8E+02 0.0062 28.3 11.3 93 267-370 31-129 (294)
295 1qpo_A Quinolinate acid phosph 42.0 39 0.0013 33.4 6.3 64 209-280 204-270 (284)
296 2dpr_A CON-T(K7GLA); conantoxi 41.9 19 0.00065 22.0 2.4 16 66-81 2-17 (26)
297 3zwt_A Dihydroorotate dehydrog 41.8 48 0.0016 33.9 7.1 101 202-308 229-354 (367)
298 3ngj_A Deoxyribose-phosphate a 41.7 1.3E+02 0.0044 28.9 9.8 89 321-421 89-180 (239)
299 2v82_A 2-dehydro-3-deoxy-6-pho 41.7 2E+02 0.0069 26.0 12.6 98 215-346 27-127 (212)
300 1kbi_A Cytochrome B2, L-LCR; f 41.6 93 0.0032 33.2 9.6 95 231-348 331-433 (511)
301 3qze_A DHDPS, dihydrodipicolin 41.6 1.6E+02 0.0054 29.1 10.9 88 273-371 58-149 (314)
302 3na8_A Putative dihydrodipicol 41.6 1.4E+02 0.0048 29.6 10.5 94 214-313 52-157 (315)
303 2f6u_A GGGPS, (S)-3-O-geranylg 41.5 31 0.0011 33.2 5.3 49 30-78 8-59 (234)
304 3dz1_A Dihydrodipicolinate syn 41.4 2E+02 0.0068 28.4 11.5 86 273-371 43-132 (313)
305 3kht_A Response regulator; PSI 41.3 1.2E+02 0.0042 24.7 8.8 114 230-369 13-128 (144)
306 3tnj_A Universal stress protei 41.2 35 0.0012 28.8 5.2 41 397-438 97-145 (150)
307 1o5k_A DHDPS, dihydrodipicolin 40.8 1.5E+02 0.0051 29.2 10.5 94 214-313 40-145 (306)
308 2og9_A Mandelate racemase/muco 40.7 42 0.0014 34.3 6.6 62 29-93 148-214 (393)
309 2rfg_A Dihydrodipicolinate syn 40.7 1.5E+02 0.0051 29.0 10.4 94 267-371 28-126 (297)
310 2qul_A D-tagatose 3-epimerase; 40.6 89 0.0031 29.4 8.6 131 214-350 24-186 (290)
311 3tak_A DHDPS, dihydrodipicolin 40.6 2.1E+02 0.0071 27.8 11.4 88 273-371 36-127 (291)
312 2e28_A Pyruvate kinase, PK; al 40.6 3.5E+02 0.012 29.4 14.0 101 200-305 191-338 (587)
313 2w6r_A Imidazole glycerol phos 40.5 1.1E+02 0.0037 28.9 9.2 41 304-356 197-238 (266)
314 2whl_A Beta-mannanase, baman5; 40.4 24 0.00083 34.2 4.5 52 42-95 33-86 (294)
315 1jbq_A B, cystathionine beta-s 40.4 1.1E+02 0.0039 31.8 9.9 124 297-440 174-304 (435)
316 1viz_A PCRB protein homolog; s 40.2 26 0.0009 33.8 4.6 49 30-78 8-59 (240)
317 3aof_A Endoglucanase; glycosyl 40.1 41 0.0014 32.6 6.2 52 42-95 35-96 (317)
318 3stp_A Galactonate dehydratase 40.0 42 0.0015 34.7 6.5 65 29-94 167-238 (412)
319 2egu_A Cysteine synthase; O-ac 39.4 1.5E+02 0.0051 28.8 10.2 120 297-440 78-204 (308)
320 3ffs_A Inosine-5-monophosphate 39.3 27 0.00092 36.3 4.8 43 34-78 139-181 (400)
321 3ble_A Citramalate synthase fr 39.3 2.2E+02 0.0076 28.3 11.6 134 211-365 101-266 (337)
322 2gn0_A Threonine dehydratase c 39.3 2.9E+02 0.01 27.2 13.3 117 297-440 101-223 (342)
323 3eod_A Protein HNR; response r 39.0 83 0.0028 25.2 7.1 63 401-475 43-110 (130)
324 3si9_A DHDPS, dihydrodipicolin 38.9 1.9E+02 0.0064 28.7 10.9 145 273-438 57-208 (315)
325 2ojp_A DHDPS, dihydrodipicolin 38.9 1.4E+02 0.0046 29.2 9.8 93 267-370 29-126 (292)
326 1vyr_A Pentaerythritol tetrani 38.7 1.9E+02 0.0065 29.2 11.1 124 203-348 150-324 (364)
327 3na8_A Putative dihydrodipicol 38.6 1.7E+02 0.0057 29.0 10.4 88 273-371 59-150 (315)
328 1ceo_A Cellulase CELC; glycosy 38.6 41 0.0014 33.1 6.0 52 41-94 29-90 (343)
329 1o66_A 3-methyl-2-oxobutanoate 38.5 2.7E+02 0.0093 27.3 11.6 127 204-346 22-180 (275)
330 3gh5_A HEX1, beta-hexosaminida 38.3 2E+02 0.0068 30.8 11.6 139 203-347 252-414 (525)
331 2dum_A Hypothetical protein PH 38.2 64 0.0022 27.8 6.6 41 397-438 105-154 (170)
332 1zcc_A Glycerophosphodiester p 38.2 54 0.0019 31.1 6.5 54 294-367 180-236 (248)
333 1i60_A IOLI protein; beta barr 38.1 2E+02 0.0067 26.6 10.6 95 214-312 21-141 (278)
334 2g0w_A LMO2234 protein; putati 38.1 1.4E+02 0.0049 28.4 9.8 33 214-246 43-81 (296)
335 1tdj_A Biosynthetic threonine 38.1 3.9E+02 0.013 28.4 14.5 115 298-440 93-214 (514)
336 3l21_A DHDPS, dihydrodipicolin 38.1 2.6E+02 0.009 27.3 11.8 89 273-371 50-141 (304)
337 7a3h_A Endoglucanase; hydrolas 37.9 31 0.0011 33.7 4.9 54 40-95 43-102 (303)
338 2ojp_A DHDPS, dihydrodipicolin 37.7 1.3E+02 0.0043 29.4 9.3 93 214-312 29-132 (292)
339 2hmc_A AGR_L_411P, dihydrodipi 37.7 2.2E+02 0.0076 28.6 11.3 95 214-314 54-159 (344)
340 3o1n_A 3-dehydroquinate dehydr 37.6 2.2E+02 0.0074 27.7 10.9 146 204-368 116-274 (276)
341 3fdx_A Putative filament prote 37.5 60 0.0021 26.9 6.1 41 397-438 94-142 (143)
342 3tr9_A Dihydropteroate synthas 37.2 3.3E+02 0.011 27.2 12.2 200 192-415 34-273 (314)
343 3s3t_A Nucleotide-binding prot 37.1 56 0.0019 27.2 5.9 41 397-438 95-145 (146)
344 1tv5_A Dhodehase, dihydroorota 37.1 61 0.0021 34.1 7.2 102 202-309 306-430 (443)
345 2zds_A Putative DNA-binding pr 37.1 1.3E+02 0.0043 29.1 9.3 138 214-361 22-226 (340)
346 3d0c_A Dihydrodipicolinate syn 36.9 1.7E+02 0.0057 29.0 10.1 94 214-313 40-144 (314)
347 4eiv_A Deoxyribose-phosphate a 36.8 71 0.0024 31.8 7.1 156 201-369 36-208 (297)
348 1j6o_A TATD-related deoxyribon 36.8 1.6E+02 0.0054 27.8 9.7 102 207-314 27-141 (268)
349 3l5l_A Xenobiotic reductase A; 36.7 1.6E+02 0.0054 29.7 10.1 129 203-347 147-325 (363)
350 1jak_A Beta-N-acetylhexosamini 36.6 2.9E+02 0.01 29.3 12.6 79 267-350 303-397 (512)
351 1o5k_A DHDPS, dihydrodipicolin 36.6 1.8E+02 0.0061 28.6 10.3 93 267-370 40-137 (306)
352 3n9k_A Glucan 1,3-beta-glucosi 36.5 28 0.00095 36.0 4.4 51 42-94 75-134 (399)
353 3tj4_A Mandelate racemase; eno 36.2 1.6E+02 0.0055 29.6 10.1 62 30-94 138-205 (372)
354 1vjz_A Endoglucanase; TM1752, 36.0 61 0.0021 31.9 6.8 53 40-94 36-98 (341)
355 3dz1_A Dihydrodipicolinate syn 35.9 3.2E+02 0.011 26.8 12.6 93 214-313 36-141 (313)
356 3vav_A 3-methyl-2-oxobutanoate 35.5 3.3E+02 0.011 26.7 11.8 94 204-312 34-147 (275)
357 3f6p_A Transcriptional regulat 35.4 1.1E+02 0.0038 24.3 7.3 62 401-475 38-104 (120)
358 1tq8_A Hypothetical protein RV 35.3 58 0.002 28.4 5.8 40 398-438 108-156 (163)
359 2y1h_A Putative deoxyribonucle 35.2 50 0.0017 31.3 5.8 103 208-314 21-147 (272)
360 3pzt_A Endoglucanase; alpha/be 35.1 39 0.0014 33.6 5.2 54 40-95 68-127 (327)
361 2osx_A Endoglycoceramidase II; 35.0 43 0.0015 35.1 5.7 53 40-94 65-126 (481)
362 1p0k_A Isopentenyl-diphosphate 34.9 1.6E+02 0.0054 29.3 9.7 30 307-348 251-281 (349)
363 1g01_A Endoglucanase; alpha/be 34.8 36 0.0012 34.2 4.9 53 41-95 54-112 (364)
364 2rdx_A Mandelate racemase/muco 34.6 53 0.0018 33.3 6.1 61 29-93 134-196 (379)
365 2yci_X 5-methyltetrahydrofolat 34.5 42 0.0014 32.8 5.1 49 44-94 38-86 (271)
366 1dbw_A Transcriptional regulat 34.5 1.6E+02 0.0053 23.4 8.1 60 404-475 42-106 (126)
367 3no3_A Glycerophosphodiester p 34.4 62 0.0021 30.5 6.3 50 296-365 185-235 (238)
368 2vc6_A MOSA, dihydrodipicolina 34.4 1.8E+02 0.0061 28.3 9.8 94 267-371 28-126 (292)
369 2zbt_A Pyridoxal biosynthesis 34.4 1.3E+02 0.0044 29.1 8.8 38 331-368 222-259 (297)
370 3r2g_A Inosine 5'-monophosphat 34.3 33 0.0011 35.2 4.4 46 34-79 93-138 (361)
371 1k77_A EC1530, hypothetical pr 34.3 2.5E+02 0.0084 25.7 10.5 31 215-246 23-53 (260)
372 1ub3_A Aldolase protein; schif 34.2 1.1E+02 0.0038 28.9 7.9 104 323-438 67-182 (220)
373 2pp0_A L-talarate/galactarate 34.2 62 0.0021 33.1 6.6 62 29-93 161-227 (398)
374 2ftp_A Hydroxymethylglutaryl-C 34.2 3.3E+02 0.011 26.5 11.8 108 330-438 86-209 (302)
375 2q3b_A Cysteine synthase A; py 34.2 3.2E+02 0.011 26.4 11.7 117 298-440 81-207 (313)
376 1zzm_A Putative deoxyribonucle 33.9 1.4E+02 0.0049 27.7 8.8 94 215-314 27-135 (259)
377 3ijp_A DHPR, dihydrodipicolina 33.8 3.3E+02 0.011 26.7 11.6 84 264-375 80-164 (288)
378 1rqb_A Transcarboxylase 5S sub 33.8 4.7E+02 0.016 28.0 14.3 189 203-420 43-255 (539)
379 1h4p_A Glucan 1,3-beta-glucosi 33.6 33 0.0011 35.3 4.5 52 42-95 75-136 (408)
380 3eb2_A Putative dihydrodipicol 33.4 1.4E+02 0.0048 29.3 8.8 93 214-312 32-135 (300)
381 3noy_A 4-hydroxy-3-methylbut-2 33.4 2.1E+02 0.0071 29.3 10.1 143 208-369 48-202 (366)
382 3toy_A Mandelate racemase/muco 33.3 1.5E+02 0.0052 30.1 9.4 62 28-94 155-221 (383)
383 1v8a_A Hydroxyethylthiazole ki 33.3 57 0.002 31.5 5.9 49 263-316 47-96 (265)
384 1xim_A D-xylose isomerase; iso 33.2 3.8E+02 0.013 26.8 13.1 145 215-363 41-234 (393)
385 2qjg_A Putative aldolase MJ040 33.1 83 0.0029 30.0 7.0 45 43-87 102-148 (273)
386 2r91_A 2-keto-3-deoxy-(6-phosp 33.1 3.4E+02 0.012 26.2 11.8 93 214-313 26-129 (286)
387 1rh9_A Endo-beta-mannanase; en 33.1 76 0.0026 31.5 7.0 50 43-94 45-106 (373)
388 3vup_A Beta-1,4-mannanase; TIM 33.0 39 0.0013 32.0 4.6 49 43-93 45-110 (351)
389 4e7p_A Response regulator; DNA 32.8 1.1E+02 0.0037 25.5 7.0 62 402-475 59-125 (150)
390 1xla_A D-xylose isomerase; iso 32.7 1.5E+02 0.0052 29.9 9.3 147 210-361 37-232 (394)
391 2bdq_A Copper homeostasis prot 32.7 3.1E+02 0.01 26.1 10.6 115 303-438 50-184 (224)
392 3b2n_A Uncharacterized protein 32.7 1.7E+02 0.0057 23.6 8.1 60 404-475 44-108 (133)
393 2d73_A Alpha-glucosidase SUSB; 32.6 2.1E+02 0.0072 32.0 10.8 102 205-312 370-506 (738)
394 4d9i_A Diaminopropionate ammon 32.5 2.5E+02 0.0087 28.4 11.0 120 297-440 125-260 (398)
395 1v71_A Serine racemase, hypoth 32.5 3.2E+02 0.011 26.6 11.4 117 297-440 87-209 (323)
396 3dzv_A 4-methyl-5-(beta-hydrox 32.4 66 0.0023 31.5 6.2 50 262-316 48-98 (273)
397 1eye_A DHPS 1, dihydropteroate 32.4 70 0.0024 31.5 6.3 68 28-98 4-92 (280)
398 1tmy_A CHEY protein, TMY; chem 32.4 1.7E+02 0.0059 22.8 7.9 59 405-475 43-106 (120)
399 1tx2_A DHPS, dihydropteroate s 32.3 1.1E+02 0.0036 30.4 7.7 69 28-98 38-127 (297)
400 3ozy_A Putative mandelate race 32.1 83 0.0028 32.1 7.2 60 30-94 139-203 (389)
401 2aam_A Hypothetical protein TM 32.0 1.4E+02 0.0048 29.7 8.6 91 215-312 130-245 (309)
402 1o4u_A Type II quinolic acid p 32.0 37 0.0013 33.6 4.2 64 209-280 203-269 (285)
403 3gl9_A Response regulator; bet 31.6 1.8E+02 0.0063 23.0 8.1 62 402-475 39-107 (122)
404 1uuq_A Mannosyl-oligosaccharid 31.6 74 0.0025 32.8 6.7 49 44-94 66-132 (440)
405 2nli_A Lactate oxidase; flavoe 31.5 1.4E+02 0.0049 30.2 8.8 88 231-347 217-313 (368)
406 3fkr_A L-2-keto-3-deoxyarabona 31.3 3.4E+02 0.012 26.5 11.4 87 273-371 43-137 (309)
407 3fij_A LIN1909 protein; 11172J 31.3 1.5E+02 0.005 28.2 8.4 47 266-312 55-113 (254)
408 3p6l_A Sugar phosphate isomera 31.2 1.7E+02 0.0059 27.0 8.8 85 214-312 29-133 (262)
409 1ve5_A Threonine deaminase; ri 31.1 3.4E+02 0.012 26.2 11.3 117 298-440 79-204 (311)
410 3tsm_A IGPS, indole-3-glycerol 31.1 3.8E+02 0.013 26.0 11.5 98 217-347 89-196 (272)
411 3fg9_A Protein of universal st 30.8 55 0.0019 27.8 4.8 41 397-438 106-155 (156)
412 2rkb_A Serine dehydratase-like 30.6 3.8E+02 0.013 25.9 12.7 114 298-440 68-191 (318)
413 2nql_A AGR_PAT_674P, isomerase 30.5 63 0.0022 32.8 5.9 61 29-94 152-216 (388)
414 4hty_A Cellulase; (alpha/beta) 30.5 65 0.0022 32.3 5.9 53 41-95 86-143 (359)
415 3dlo_A Universal stress protei 30.4 1E+02 0.0035 26.4 6.6 41 397-438 105-154 (155)
416 2nuw_A 2-keto-3-deoxygluconate 30.4 3.8E+02 0.013 25.9 11.9 93 214-313 27-130 (288)
417 3ih1_A Methylisocitrate lyase; 30.3 1.4E+02 0.0046 29.8 8.1 79 249-347 158-243 (305)
418 1jmv_A USPA, universal stress 30.3 83 0.0028 26.0 5.8 41 397-438 90-136 (141)
419 3fok_A Uncharacterized protein 30.3 3E+02 0.01 27.4 10.5 153 279-436 53-241 (307)
420 2y5s_A DHPS, dihydropteroate s 30.3 77 0.0026 31.4 6.2 68 28-98 21-109 (294)
421 1x1o_A Nicotinate-nucleotide p 30.1 63 0.0022 31.9 5.6 63 208-279 205-268 (286)
422 1o58_A O-acetylserine sulfhydr 30.1 2.3E+02 0.0079 27.4 9.8 116 298-440 79-205 (303)
423 2uva_G Fatty acid synthase bet 30.0 1.4E+02 0.0049 37.4 9.8 118 210-346 657-794 (2060)
424 2gm3_A Unknown protein; AT3G01 29.9 67 0.0023 27.9 5.3 41 397-438 112-161 (175)
425 2p8b_A Mandelate racemase/muco 29.8 97 0.0033 31.1 7.1 46 44-93 147-192 (369)
426 3nbm_A PTS system, lactose-spe 29.7 32 0.0011 28.9 2.9 66 230-312 18-83 (108)
427 2qr3_A Two-component system re 29.6 2.2E+02 0.0074 22.8 8.6 61 403-475 41-111 (140)
428 1oy0_A Ketopantoate hydroxymet 29.5 4.1E+02 0.014 26.0 11.3 128 204-346 39-198 (281)
429 3cny_A Inositol catabolism pro 29.2 1.4E+02 0.0049 28.1 8.0 95 214-312 38-159 (301)
430 3kts_A Glycerol uptake operon 29.2 2.6E+02 0.0088 25.9 9.3 125 207-369 17-148 (192)
431 1q77_A Hypothetical protein AQ 29.1 42 0.0014 27.9 3.6 41 397-438 97-137 (138)
432 1ypf_A GMP reductase; GUAC, pu 28.9 46 0.0016 33.3 4.5 47 33-79 98-146 (336)
433 3jug_A Beta-mannanase; TIM-bar 28.9 45 0.0015 33.7 4.4 51 44-96 58-110 (345)
434 1z41_A YQJM, probable NADH-dep 28.9 4.1E+02 0.014 26.2 11.6 128 204-347 134-307 (338)
435 3o63_A Probable thiamine-phosp 28.7 1.2E+02 0.0041 28.9 7.2 44 43-86 46-98 (243)
436 2nzl_A Hydroxyacid oxidase 1; 28.7 1.1E+02 0.0039 31.3 7.5 95 231-348 240-337 (392)
437 3a5f_A Dihydrodipicolinate syn 28.6 1.7E+02 0.0057 28.5 8.4 94 214-313 29-134 (291)
438 3ddm_A Putative mandelate race 28.6 83 0.0029 32.2 6.4 48 43-94 160-207 (392)
439 3grc_A Sensor protein, kinase; 28.6 2.3E+02 0.0078 22.8 9.7 62 401-475 42-112 (140)
440 3kru_A NADH:flavin oxidoreduct 28.5 3.4E+02 0.012 27.2 10.9 129 203-347 132-307 (343)
441 2hk0_A D-psicose 3-epimerase; 28.5 3.8E+02 0.013 25.3 12.5 130 212-350 42-204 (309)
442 1w3i_A EDA, 2-keto-3-deoxy glu 28.3 4.1E+02 0.014 25.7 11.9 93 214-313 27-130 (293)
443 3mqt_A Mandelate racemase/muco 28.3 1.9E+02 0.0067 29.3 9.2 63 29-94 132-208 (394)
444 1xi3_A Thiamine phosphate pyro 28.3 1.3E+02 0.0046 27.0 7.3 47 43-91 29-75 (215)
445 3if2_A Aminotransferase; YP_26 28.1 90 0.0031 31.4 6.6 50 32-82 368-439 (444)
446 1gte_A Dihydropyrimidine dehyd 28.0 2.9E+02 0.01 31.8 11.6 86 250-347 634-735 (1025)
447 3r0j_A Possible two component 28.0 3.1E+02 0.011 25.0 10.0 62 402-475 60-126 (250)
448 2y88_A Phosphoribosyl isomeras 27.9 44 0.0015 31.2 3.9 61 215-283 39-107 (244)
449 4h83_A Mandelate racemase/muco 27.8 1.9E+02 0.0064 29.4 8.9 64 29-95 151-218 (388)
450 2qgy_A Enolase from the enviro 27.8 90 0.0031 31.7 6.5 48 44-94 155-202 (391)
451 1h5y_A HISF; histidine biosynt 27.8 79 0.0027 29.2 5.7 79 215-310 162-251 (253)
452 4e4u_A Mandalate racemase/muco 27.8 2.6E+02 0.0089 28.6 10.1 66 29-94 124-209 (412)
453 2pgw_A Muconate cycloisomerase 27.7 1.6E+02 0.0054 29.7 8.4 95 204-312 201-297 (384)
454 3i4k_A Muconate lactonizing en 27.7 2.5E+02 0.0086 28.3 9.9 101 204-318 205-307 (383)
455 2z6i_A Trans-2-enoyl-ACP reduc 27.7 4.4E+02 0.015 25.8 13.1 123 192-348 11-138 (332)
456 2e7c_A Myosin-binding protein 27.6 49 0.0017 26.6 3.7 81 94-182 20-101 (118)
457 4g9p_A 4-hydroxy-3-methylbut-2 27.5 81 0.0028 32.8 6.0 50 42-94 40-89 (406)
458 1ivn_A Thioesterase I; hydrola 27.4 86 0.0029 27.4 5.6 52 262-313 50-106 (190)
459 2c0h_A Mannan endo-1,4-beta-ma 27.4 58 0.002 31.9 4.9 49 43-93 48-111 (353)
460 3f6c_A Positive transcription 27.4 1.3E+02 0.0043 24.2 6.3 76 405-501 42-122 (134)
461 2poz_A Putative dehydratase; o 27.2 83 0.0029 31.9 6.1 50 45-94 144-207 (392)
462 3bjs_A Mandelate racemase/muco 26.9 1.1E+02 0.0038 31.6 7.1 47 44-94 191-237 (428)
463 1vhn_A Putative flavin oxidore 26.9 1.3E+02 0.0045 29.6 7.4 99 229-348 108-214 (318)
464 3i4k_A Muconate lactonizing en 26.8 1E+02 0.0036 31.2 6.8 62 31-95 139-203 (383)
465 1srr_A SPO0F, sporulation resp 26.8 2.2E+02 0.0075 22.3 7.7 59 405-475 43-106 (124)
466 3gd6_A Muconate cycloisomerase 26.8 99 0.0034 31.5 6.6 61 30-94 128-195 (391)
467 1yx1_A Hypothetical protein PA 26.7 1.5E+02 0.0052 27.5 7.6 31 215-246 31-64 (264)
468 4e8g_A Enolase, mandelate race 26.7 1.2E+02 0.0042 30.9 7.3 60 30-94 154-218 (391)
469 3nl6_A Thiamine biosynthetic b 26.6 96 0.0033 33.4 6.7 45 43-87 28-72 (540)
470 4h3d_A 3-dehydroquinate dehydr 26.6 4.3E+02 0.015 25.2 15.7 136 195-347 20-176 (258)
471 2gl5_A Putative dehydratase pr 26.4 1.4E+02 0.0047 30.5 7.6 66 29-94 129-226 (410)
472 2k8i_A SLYD, peptidyl-prolyl C 26.4 2E+02 0.0069 25.9 7.9 87 109-205 51-143 (171)
473 1yxy_A Putative N-acetylmannos 26.3 3.8E+02 0.013 24.5 10.9 110 208-348 37-163 (234)
474 1sjd_A N-acylamino acid racema 26.3 2.8E+02 0.0096 27.5 9.9 100 204-318 194-295 (368)
475 3tfx_A Orotidine 5'-phosphate 26.3 3.9E+02 0.013 25.7 10.4 127 217-367 80-236 (259)
476 3mil_A Isoamyl acetate-hydroly 26.3 78 0.0027 28.5 5.2 53 261-313 58-120 (240)
477 3qho_A Endoglucanase, 458AA lo 26.2 60 0.0021 34.1 4.9 50 43-94 87-155 (458)
478 3sgz_A Hydroxyacid oxidase 2; 26.2 2.8E+02 0.0094 28.1 9.7 30 307-348 272-302 (352)
479 1izc_A Macrophomate synthase i 26.1 3.1E+02 0.011 27.4 10.1 88 238-347 28-124 (339)
480 2gjl_A Hypothetical protein PA 26.1 4.6E+02 0.016 25.5 15.5 109 215-350 34-148 (328)
481 2zad_A Muconate cycloisomerase 26.1 1.3E+02 0.0045 29.8 7.3 46 44-94 145-190 (345)
482 1y0e_A Putative N-acetylmannos 26.1 3.7E+02 0.013 24.3 16.0 111 207-347 23-146 (223)
483 3h5d_A DHDPS, dihydrodipicolin 25.9 3.7E+02 0.012 26.4 10.5 91 267-371 35-134 (311)
484 2pz0_A Glycerophosphoryl diest 25.9 60 0.0021 30.8 4.5 49 296-364 200-249 (252)
485 3g0t_A Putative aminotransfera 25.9 82 0.0028 31.5 5.7 50 32-82 374-436 (437)
486 3knb_A Titin; IG-like, titin, 25.8 1.2E+02 0.004 23.9 5.7 73 106-185 13-89 (100)
487 3qr3_A Endoglucanase EG-II; TI 25.8 42 0.0014 33.8 3.5 53 42-96 45-107 (340)
488 3dwg_A Cysteine synthase B; su 25.7 3.5E+02 0.012 26.5 10.3 10 505-514 178-187 (325)
489 3a5f_A Dihydrodipicolinate syn 25.7 2.4E+02 0.0082 27.4 9.0 86 273-369 36-125 (291)
490 1jw9_B Molybdopterin biosynthe 25.6 1.8E+02 0.0061 27.5 7.9 65 235-312 87-151 (249)
491 2ox4_A Putative mandelate race 25.6 1.5E+02 0.005 30.2 7.6 51 44-94 152-217 (403)
492 3hv2_A Response regulator/HD d 25.5 2.8E+02 0.0096 22.8 8.8 61 403-475 52-118 (153)
493 2qr6_A IMP dehydrogenase/GMP r 25.4 1.5E+02 0.0052 30.0 7.7 67 215-287 227-314 (393)
494 3mkc_A Racemase; metabolic pro 25.3 2.1E+02 0.0072 29.1 8.8 62 30-94 138-213 (394)
495 3a24_A Alpha-galactosidase; gl 25.3 2.4E+02 0.0081 31.1 9.5 99 205-312 308-423 (641)
496 3koj_A Uncharacterized protein 25.3 1.9E+02 0.0064 24.2 6.9 24 136-164 65-88 (108)
497 1wa3_A 2-keto-3-deoxy-6-phosph 25.3 3.6E+02 0.012 24.0 12.5 121 211-368 75-201 (205)
498 4dpp_A DHDPS 2, dihydrodipicol 25.3 2.9E+02 0.01 28.0 9.7 91 214-312 87-188 (360)
499 1bqc_A Protein (beta-mannanase 25.2 47 0.0016 32.1 3.7 49 44-94 36-86 (302)
500 3cz5_A Two-component response 25.2 1.6E+02 0.0055 24.3 6.8 62 402-475 44-110 (153)
No 1
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.8e-138 Score=1108.46 Aligned_cols=490 Identities=36% Similarity=0.606 Sum_probs=451.6
Q ss_pred ccceeecccccccccccCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHH-H
Q 036921 4 SHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVK-T 82 (527)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~-~ 82 (527)
+||+|.. ++|.++|+|++|+.+.|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ +
T Consensus 23 ~~~~~~~-~~~~~i~~~~~~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~ 101 (520)
T 3khd_A 23 SMQSAAN-ITLRQILEPNNVNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELR 101 (520)
T ss_dssp CHHHHHT-CCHHHHSCCC-CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHC
T ss_pred cccccCC-cCHHHhcCCCCCcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 4666666 9999999998888899999999999999999999999999999999999999999999999999999999 7
Q ss_pred cCCceEEEecCCCCeEEeeeCCCCcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEE
Q 036921 83 TKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTS 162 (527)
Q Consensus 83 ~~~~v~i~~Dl~GpkiR~~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~ 162 (527)
+|+|++||+|||||||||+...+++++|++|++++|+++....|+.+.|+++|++|++++++||+||+| ||+|.|+
T Consensus 102 ~~~~vaIllDl~GPkIR~G~~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~Ilid----DG~i~l~ 177 (520)
T 3khd_A 102 PNCLLGMLLDTKGPEIRTGFLKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIA----DGSVSCK 177 (520)
T ss_dssp SSCCCEEEEECCCCCEEBCEEC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEET----TTTEEEE
T ss_pred cCCceEEEEeCCCCeEEeeccCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEe----CCEEEEE
Confidence 999999999999999999766555569999999999998556788999999999999999999999999 9999999
Q ss_pred EEEEEEEeeCCeEEEEEEeCcEecCCCcccccCCccccCCCCCHhhHHHH-HhhcccccccEEEecCCCCHHHHHHHHHH
Q 036921 163 VWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVI-SSWGVQNKIDFLSLSYTRHAEDVRQAREY 241 (527)
Q Consensus 163 V~l~~~~~~~~~v~~~v~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di-~~~~~~~g~d~I~~sfV~s~~dv~~lr~~ 241 (527)
| .+++++.+.|+|++||.| +++||||+||..+++|+||+||++|| . |++++|+|||++||||+++||+++|++
T Consensus 178 V----~~~~~~~v~~~V~~gG~L-~~~KgvNlPg~~~~lp~lTekD~~dl~~-f~~~~~vD~Ia~SFVr~a~Dv~~~r~~ 251 (520)
T 3khd_A 178 V----LETHEDHVITEVLNSAVI-GERKNMNLPNVKVDLPIISEKDKNDILN-FAIPMGCNFIAASFIQSADDVRLIRNL 251 (520)
T ss_dssp E----EEECSSCEEEEECC-CCC-CSSCEEECTTSCCCSCSSCHHHHHHHHH-THHHHTCCEEEETTCCSHHHHHHHHHH
T ss_pred E----EEEECCEEEEEEEeCeEE-eCCceeecCCCcCCCCCCCHHHHHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHH
Confidence 9 556789999999999999 99999999999999999999999999 7 999999999999999999999999999
Q ss_pred HHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhh
Q 036921 242 LSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMT 320 (527)
Q Consensus 242 l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~ 320 (527)
|.+.| .++.|||||||++||+|+|||++++|||||||||||+|+|+++||.+||+||++||++|||||+ |||||||+
T Consensus 252 l~~~g--~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi 329 (520)
T 3khd_A 252 LGPRG--RHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMT 329 (520)
T ss_dssp HTTTT--TTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGG
T ss_pred HHhcC--CCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHh
Confidence 99888 7899999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred cCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHH
Q 036921 321 DNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASS 400 (527)
Q Consensus 321 ~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~ 400 (527)
+||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|...|+......+.+.+..++||.+
T Consensus 330 ~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~a 409 (520)
T 3khd_A 330 KNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARS 409 (520)
T ss_dssp TCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHH
T ss_pred cCCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988877765443344566789999999
Q ss_pred HHHHHHhcCCcEEEEECCCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCC
Q 036921 401 AVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAES 480 (527)
Q Consensus 401 av~~a~~~~a~~Ivv~T~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~ 480 (527)
|+++|.+++|++|++||.||+||+++|||||.|||||+ |++++++|||+|+|||+|++++..
T Consensus 410 a~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~-------------T~~~~~~r~l~L~~GV~p~~~~~~----- 471 (520)
T 3khd_A 410 AVETAESIQASLIIALTETGYTARLIAKYKPSCTILAL-------------SASDSTVKCLNVHRGVTCIKVGSF----- 471 (520)
T ss_dssp HHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEE-------------ESCHHHHHHGGGSTTEEEEECCSC-----
T ss_pred HHHHHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEE-------------cCCHHHHHHHhccCCeEEEEeCCC-----
Confidence 99999999999999999999999999999999999999 689999999999999999998754
Q ss_pred CccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec-----CCCceEEEEEeC
Q 036921 481 TNATNESVLKVALDHGKASGVIKSHDRVVVCQKV-----GDASVVKIIELE 526 (527)
Q Consensus 481 ~~~~~e~~i~~a~~~a~e~g~v~~GD~VVvv~g~-----g~tn~ikv~~v~ 526 (527)
.+.+++++.+++++++.|++++||.||+++|+ |+||++||+.|+
T Consensus 472 --~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~~G~TN~lrv~~v~ 520 (520)
T 3khd_A 472 --QGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQIE 520 (520)
T ss_dssp --CCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC-CCSSTTCEEEEEEEECC
T ss_pred --CCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEeC
Confidence 57899999999999999999999999999997 799999999873
No 2
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=2.1e-135 Score=1089.20 Aligned_cols=488 Identities=36% Similarity=0.626 Sum_probs=452.5
Q ss_pred eeecccccccccccCC-CCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHc-C
Q 036921 7 LLEEPIRMASILEPSK-ASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTT-K 84 (527)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~-~ 84 (527)
+....++|.++|.|.+ ...+.|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++ |
T Consensus 14 ~~~~~~~l~~i~~~~~~~~~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~ 93 (511)
T 3gg8_A 14 LYFQGIRMSQILEPRSEEDWTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE 93 (511)
T ss_dssp -------CTTTTCCCCHHHHTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccccchhhhcCcccccccccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 3444599999999954 4468899999999999999999999999999999999999999999999999999999998 9
Q ss_pred CceEEEecCCCCeEEeeeCCC-CcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEE
Q 036921 85 KLCAVMLDTVGPELQVVNKSE-KAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSV 163 (527)
Q Consensus 85 ~~v~i~~Dl~GpkiR~~~~~~-~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V 163 (527)
+|++|++||+||||||+...+ +++.|++|++++|+++....|+.+.|+++|++|++++++||+||+| ||+|.|+|
T Consensus 94 ~~vaIl~Dl~GPkIR~g~~~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid----DG~i~l~V 169 (511)
T 3gg8_A 94 ARLAILLDTKGPEIRTGFLKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIA----DGSLSVKV 169 (511)
T ss_dssp CCCEEEEECCCCCCBBCC-----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEET----TTTEEEEE
T ss_pred CceEEEEECCCCEEecccCCCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEE----CCEEEEEE
Confidence 999999999999999976654 4799999999999998556789999999999999999999999999 99999999
Q ss_pred EEEEEEeeCCeEEEEEEeCcEecCCCcccccCCccccCCCCCHhhHHHH-HhhcccccccEEEecCCCCHHHHHHHHHHH
Q 036921 164 WLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVI-SSWGVQNKIDFLSLSYTRHAEDVRQAREYL 242 (527)
Q Consensus 164 ~l~~~~~~~~~v~~~v~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di-~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l 242 (527)
.+++++.+.|+|++||.| +++||||+||..+++|+||+||++|| . |++++|+|||++||||+++||+++|++|
T Consensus 170 ----~~v~~~~i~~~V~~gG~L-~~~KgvNlPg~~~~lp~lTekD~~Dl~~-f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l 243 (511)
T 3gg8_A 170 ----VEVGSDYVITQAQNTATI-GERKNMNLPNVKVQLPVIGEKDKHDILN-FGIPMGCNFIAASFVQSADDVRYIRGLL 243 (511)
T ss_dssp ----EEECSSEEEEEESSCEEE-CSSCBEECTTCCCCSCSSCHHHHHHHHH-TTTTTTCCEEEETTCCSHHHHHHHHHHH
T ss_pred ----EEEeCCEEEEEEEeCeEE-cCCcceecCCCccCCCCCCHHHHHHHHH-HHHHcCCCEEEEcCCCCHHHHHHHHHHH
Confidence 556889999999999999 99999999999999999999999999 7 9999999999999999999999999999
Q ss_pred HHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhc
Q 036921 243 SKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTD 321 (527)
Q Consensus 243 ~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~ 321 (527)
.+.| .++.|||||||++|++|+|+|++++|||||||||||+|+|++++|.+||+|+++|+++|||||+ |||||||++
T Consensus 244 ~~~~--~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~ 321 (511)
T 3gg8_A 244 GPRG--RHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIK 321 (511)
T ss_dssp TGGG--TTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGT
T ss_pred HhcC--CCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhc
Confidence 9988 7899999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHH
Q 036921 322 NLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSA 401 (527)
Q Consensus 322 ~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~a 401 (527)
||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|...|+........+.+..++||.+|
T Consensus 322 ~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa 401 (511)
T 3gg8_A 322 NPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAA 401 (511)
T ss_dssp CSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998887777554433445567899999999
Q ss_pred HHHHHhcCCcEEEEECCCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCC
Q 036921 402 VRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAEST 481 (527)
Q Consensus 402 v~~a~~~~a~~Ivv~T~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~ 481 (527)
+++|.+++|++|++||.||+||+++|||||.|||||+ |++++++|||+|+|||+|++++..
T Consensus 402 ~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP~~PIia~-------------T~~~~~~r~l~L~~GV~p~~~~~~------ 462 (511)
T 3gg8_A 402 VETAECVNAAIILALTETGQTARLIAKYRPMQPILAL-------------SASESTIKHLQVIRGVTTMQVPSF------ 462 (511)
T ss_dssp HHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEE-------------ESCHHHHHHGGGSTTEEEEECCC-------
T ss_pred HHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEE-------------cCCHHHHHHhhccCCeEEEEeCCC------
Confidence 9999999999999999999999999999999999999 689999999999999999998754
Q ss_pred ccCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec-----CCCceEEEEEeC
Q 036921 482 NATNESVLKVALDHGKASGVIKSHDRVVVCQKV-----GDASVVKIIELE 526 (527)
Q Consensus 482 ~~~~e~~i~~a~~~a~e~g~v~~GD~VVvv~g~-----g~tn~ikv~~v~ 526 (527)
.+.++++..|+++++++|++++||.||+++|+ |+||++||+.|+
T Consensus 463 -~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 463 -QGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp --CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC------CCEEEEEEECC
T ss_pred -CCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEcC
Confidence 57899999999999999999999999999997 799999999875
No 3
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.2e-134 Score=1089.31 Aligned_cols=486 Identities=36% Similarity=0.599 Sum_probs=447.7
Q ss_pred cccccccccCCCCC-CCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHH-HcCCceEE
Q 036921 12 IRMASILEPSKASF-FPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVK-TTKKLCAV 89 (527)
Q Consensus 12 ~~~~~~~~~~~~~~-~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~-~~~~~v~i 89 (527)
++|..++.|..... +.|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++ ++|+|++|
T Consensus 27 ~~~~~~~~~~~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~~vaI 106 (526)
T 4drs_A 27 LGMDKICSPLADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGI 106 (526)
T ss_dssp HHHHHC---------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTTCCCEE
T ss_pred ccchhhhcccccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 55667777766433 78999999999999999999999999999999999999999999999999999987 58999999
Q ss_pred EecCCCCeEEeeeCC-CCcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEE
Q 036921 90 MLDTVGPELQVVNKS-EKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVS 168 (527)
Q Consensus 90 ~~Dl~GpkiR~~~~~-~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~ 168 (527)
++||+||||||+... +++++|++||+|+|+++....|+.+.++++|++|++++++||+||+| ||+|.|+| .
T Consensus 107 l~Dl~GPkIR~g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid----DG~i~l~V----~ 178 (526)
T 4drs_A 107 MLDTKGPEIRTGMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIA----DGSLSTQV----L 178 (526)
T ss_dssp EEECCCSCCBBCCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEET----TTTEEEEE----E
T ss_pred EEECCCCeeEEEecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEe----CCCceEEE----E
Confidence 999999999997654 45799999999999998767789999999999999999999999999 99999999 5
Q ss_pred EeeCCeEEEEEEeCcEecCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCC-
Q 036921 169 EVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGD- 247 (527)
Q Consensus 169 ~~~~~~v~~~v~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~- 247 (527)
+++++.+.|+|.+||.| +++||||+||..+++|+||+||++|+.+|++++|+|||++||||+++||.++|++|.+.|.
T Consensus 179 ~v~~~~i~~~V~~gG~L-~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~ 257 (526)
T 4drs_A 179 EIGDDFIVCKVLNSVTI-GERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQY 257 (526)
T ss_dssp EECSSEEEEECCSCCEE-CSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTT
T ss_pred EEeCCeEEEEeccCccc-cccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcc
Confidence 56889999999999999 9999999999999999999999999435999999999999999999999999999998762
Q ss_pred ----CCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcC
Q 036921 248 ----LSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDN 322 (527)
Q Consensus 248 ----~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~ 322 (527)
..+++||||||+++|++|+|+|++++|||||||||||+|+|+|+||.+||+||++|+++|||||+ |||||||++|
T Consensus 258 ~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~n 337 (526)
T 4drs_A 258 SNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKS 337 (526)
T ss_dssp TTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSS
T ss_pred cccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhC
Confidence 13689999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHH
Q 036921 323 LRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAV 402 (527)
Q Consensus 323 p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av 402 (527)
|+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|...|+......+.+.+..++||.+|+
T Consensus 338 p~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~ 417 (526)
T 4drs_A 338 NRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAV 417 (526)
T ss_dssp SSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988887666556667788999999999
Q ss_pred HHHHhcCCcEEEEECCCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCc
Q 036921 403 RAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTN 482 (527)
Q Consensus 403 ~~a~~~~a~~Ivv~T~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~ 482 (527)
++|.+++|++|++||.||+||+++|||||.|||||+ |++++++|||+|+|||+|++++..
T Consensus 418 ~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~-------------T~~~~~~r~l~L~wGV~p~~~~~~------- 477 (526)
T 4drs_A 418 ESAHDVNAKLIITITETGNTARLISKYRPSQTIIAC-------------TAKPEVARGLKIARGVKTYVLNSI------- 477 (526)
T ss_dssp HHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEE-------------ESCHHHHHHGGGSTTEEEEECSCC-------
T ss_pred HHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEE-------------CCCHHHHHhhhccCCeEEEEeCCC-------
Confidence 999999999999999999999999999999999999 689999999999999999998755
Q ss_pred cCHHHHHHHHHHHHHHcCCCCCCCEEEEEEec-----CCCceEEEEEeC
Q 036921 483 ATNESVLKVALDHGKASGVIKSHDRVVVCQKV-----GDASVVKIIELE 526 (527)
Q Consensus 483 ~~~e~~i~~a~~~a~e~g~v~~GD~VVvv~g~-----g~tn~ikv~~v~ 526 (527)
.+.+++++.|+++++++|++++||.||+++|+ |+||+|||++|.
T Consensus 478 ~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 478 HHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp CCHHHHHHHHHHHHHHTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence 67899999999999999999999999999997 899999999874
No 4
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=2e-133 Score=1080.39 Aligned_cols=478 Identities=35% Similarity=0.577 Sum_probs=449.7
Q ss_pred CCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHH------cCCceEEEecCCCC
Q 036921 23 ASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGP 96 (527)
Q Consensus 23 ~~~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~------~~~~v~i~~Dl~Gp 96 (527)
++...|||||||||||+|+++|+|++|+++||||||||||||++|+|.++|+++|+++++ +++|++|++||+||
T Consensus 57 ~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~~~vaIllDlkGP 136 (550)
T 3gr4_A 57 PPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGP 136 (550)
T ss_dssp CCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCEEEEECCCS
T ss_pred CCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccCceEEEEEeCCCC
Confidence 345789999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred eEEeeeCCC---CcEEeecCCEEEEeeCCC--CCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEee
Q 036921 97 ELQVVNKSE---KAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVK 171 (527)
Q Consensus 97 kiR~~~~~~---~~i~l~~G~~v~l~~~~~--~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~ 171 (527)
||||+...+ ++++|++|++|+|+++.. ..|+.+.++++|++|++++++||+||+| ||+|.|+| .+++
T Consensus 137 kIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid----DG~i~l~V----~~v~ 208 (550)
T 3gr4_A 137 EIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVD----DGLISLQV----KQKG 208 (550)
T ss_dssp CCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEET----TTTEEEEE----EEEC
T ss_pred EEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEe----CCEEEEEE----EEEe
Confidence 999976532 479999999999998753 3688899999999999999999999999 99999999 5568
Q ss_pred CCeEEEEEEeCcEecCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCc
Q 036921 172 GNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQT 251 (527)
Q Consensus 172 ~~~v~~~v~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~ 251 (527)
++.+.|+|++||.| +++||||+||..+++|+||+||++||+ |++++|+|||++|||++++|++++|++|.+.| .++
T Consensus 209 ~~~v~~~V~~gG~L-~s~KgvNlPg~~l~lpalTekD~~dl~-f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g--~~i 284 (550)
T 3gr4_A 209 ADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDLK-FGVEQDVDMVFASFIRKASDVHEVRKVLGEKG--KNI 284 (550)
T ss_dssp SSEEEEEEEECEEE-CSSCBEECTTSCCCCCSSCHHHHHHHH-HHHHTTCSEEEETTCCSHHHHHHHHHHHTTTT--TTS
T ss_pred CCEEEEEEEeCcEE-cCCceeecCCCccCCCCCCHHHHHHHH-HHHHcCCCEEEecCCCCHHHHHHHHHHHHhcC--CCc
Confidence 89999999999999 999999999999999999999999996 99999999999999999999999999999888 789
Q ss_pred eEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhh
Q 036921 252 QIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEA 330 (527)
Q Consensus 252 ~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv 330 (527)
.|||||||++||+|+|||++++|||||||||||+|+|++++|.+||+|+++||++|||||+ |||||||++||+|||||+
T Consensus 285 ~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEv 364 (550)
T 3gr4_A 285 KIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEG 364 (550)
T ss_dssp EEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCC
Q 036921 331 TDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKA 410 (527)
Q Consensus 331 ~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a 410 (527)
+||||||+||+||+|||+|||.|+||+|||++|++||+++|+..+|...|..+....+.+.+..++||.+|+++|.+++|
T Consensus 365 sDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a 444 (550)
T 3gr4_A 365 SDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCS 444 (550)
T ss_dssp HHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999888777654433445667899999999999999999
Q ss_pred cEEEEECCCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHH
Q 036921 411 SVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLK 490 (527)
Q Consensus 411 ~~Ivv~T~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~ 490 (527)
++|++||.||+||+++|||||.|||||+ |++++++|||+|+|||+|++++.....+ |.++.+++++
T Consensus 445 ~aIv~~T~SG~TA~~iSr~RP~~PIia~-------------T~~~~~aR~l~L~~GV~P~~~~~~~~~~-~~~~~d~~~~ 510 (550)
T 3gr4_A 445 GAIIVLTKSGRSAHQVARYRPRAPIIAV-------------TRNPQTARQAHLYRGIFPVLCKDPVQEA-WAEDVDLRVN 510 (550)
T ss_dssp SCEEEECSSSHHHHHHHTTCCSSCEEEE-------------ESCHHHHHHGGGSTTEEEEECCSCCCSS-HHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHhhCCCCCEEEE-------------cCCHHHHHHHhccCCeEEEEeccccccc-ccCCHHHHHH
Confidence 9999999999999999999999999999 6799999999999999999987654333 3567899999
Q ss_pred HHHHHHHHcCCCCCCCEEEEEEec----CCCceEEEEEeC
Q 036921 491 VALDHGKASGVIKSHDRVVVCQKV----GDASVVKIIELE 526 (527)
Q Consensus 491 ~a~~~a~e~g~v~~GD~VVvv~g~----g~tn~ikv~~v~ 526 (527)
.|+++++++|++++||.||+++|+ |+||++||+.|.
T Consensus 511 ~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 511 FAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp HHHHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred HHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 999999999999999999999997 899999999873
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=8.7e-134 Score=1075.50 Aligned_cols=476 Identities=33% Similarity=0.575 Sum_probs=443.5
Q ss_pred CCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeEEeee
Q 036921 23 ASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN 102 (527)
Q Consensus 23 ~~~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~~~ 102 (527)
|+..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++++++|+|++|++|||||||||+.
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~ 94 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQ 94 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCcEEEEEeCCCCEEeeec
Confidence 44578999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCC-CcEEeecCCEEEEeeCC--CCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEee-CCeEEEE
Q 036921 103 KSE-KAISLKADGSVVLTPDC--GQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVK-GNDVTCV 178 (527)
Q Consensus 103 ~~~-~~i~l~~G~~v~l~~~~--~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~-~~~v~~~ 178 (527)
..+ +++ |++|++++|+++. ...|+.+.++++|++|++++++||+||+| ||+|.|+| ++ ++ ++.+.|+
T Consensus 95 ~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilid----DG~i~l~V-~~---~~~~~~i~~~ 165 (499)
T 3hqn_D 95 FVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYID----DGILILQV-QS---HEDEQTLECT 165 (499)
T ss_dssp BGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEET----TTTEEEEE-EE---EEETTEEEEE
T ss_pred cCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEe----CCEEEEEE-EE---EcCCCeEEEE
Confidence 544 357 9999999999874 34688899999999999999999999999 99999999 54 44 6789999
Q ss_pred EEeCcEecCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeec
Q 036921 179 IKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIE 258 (527)
Q Consensus 179 v~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIE 258 (527)
|++||.| +++||||+||..+++|+||+||++||+ |++++|+|+|++|||++++|++++|++|.+.| .++.||||||
T Consensus 166 v~~gG~L-~~~KgvNlPg~~~~lp~ltekD~~dl~-~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~--~~i~IiaKIE 241 (499)
T 3hqn_D 166 VTNSHTI-SDRRGVNLPGCDVDLPAVSAKDRVDLQ-FGVEQGVDMIFASFIRSAEQVGDVRKALGPKG--RDIMIICKIE 241 (499)
T ss_dssp ECSCEEE-ETTCBEECTTSCCCCCSSCHHHHHHHH-HHHHTTCSEEEETTCCSHHHHHHHHHHHCGGG--TTSEEEEEEC
T ss_pred EEeCcEe-eCCCceecCCCCCCCCCCCHHHHHHHH-HHHHcCCCEEEecCCCCHHHHHHHHHHHHhcC--CCCeEEEEEC
Confidence 9999999 999999999999999999999999996 99999999999999999999999999999888 7899999999
Q ss_pred ChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH
Q 036921 259 NIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 259 t~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav 337 (527)
|++|++|+|||++++|||||||||||+|+|++++|.+||+|+++||++|||||+ |||||||++||+|||||++||||||
T Consensus 242 ~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV 321 (499)
T 3hqn_D 242 NHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAV 321 (499)
T ss_dssp SHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHH
T ss_pred CHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEEC
Q 036921 338 LDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFT 417 (527)
Q Consensus 338 ~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T 417 (527)
+||+||+|||+|||.|+||+|||++|++||+++|+.++|...|.......+.+.+..++||.+|+++|.+++|++|++||
T Consensus 322 ~dG~DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T 401 (499)
T 3hqn_D 322 FNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLS 401 (499)
T ss_dssp HHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HcCCcEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999999999999999999999999999999998887776544444455678999999999999999999999999
Q ss_pred CCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHHHHHHHHH
Q 036921 418 SSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGK 497 (527)
Q Consensus 418 ~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~~a~~~a~ 497 (527)
.||+||+++|||||.|||||+ |++++++|||+|+|||+|++++.....+ .++.+++++.++++++
T Consensus 402 ~SG~tA~~isr~RP~~pIia~-------------T~~~~~~r~l~L~~GV~p~~~~~~~~~~--~~~~d~~~~~a~~~~~ 466 (499)
T 3hqn_D 402 NTGRSARLVAKYRPNCPIVCV-------------TTRLQTCRQLNITQGVESVFFDADKLGH--DEGKEHRVAAGVEFAK 466 (499)
T ss_dssp SSSHHHHHHHHTCCSSCEEEE-------------ESCHHHHHHGGGSTTEEEEECCHHHHCC--CTTCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHhhCCCCCEEEE-------------cCCHHHHHHhhccCCeEEEEeccccccc--cCCHHHHHHHHHHHHH
Confidence 999999999999999999999 6899999999999999999986431100 1367889999999999
Q ss_pred HcCCCCCCCEEEEEEec----CCCceEEEEEeC
Q 036921 498 ASGVIKSHDRVVVCQKV----GDASVVKIIELE 526 (527)
Q Consensus 498 e~g~v~~GD~VVvv~g~----g~tn~ikv~~v~ 526 (527)
+.|++++||.||+++|+ |+||++||+.|+
T Consensus 467 ~~g~~~~GD~vVv~~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 467 SKGYVQTGDYCVVIHADHKVKGYANQTRILLVE 499 (499)
T ss_dssp HTTSCCTTCEEEEEEECC-----CEEEEEEECC
T ss_pred HcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 99999999999999998 899999999875
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=2e-131 Score=1079.15 Aligned_cols=472 Identities=33% Similarity=0.574 Sum_probs=446.3
Q ss_pred CCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeEEeee
Q 036921 23 ASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN 102 (527)
Q Consensus 23 ~~~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~~~ 102 (527)
++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|+++|++++++|+|++|++||+||||||+.
T Consensus 18 ~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~~vail~Dl~GPkiR~g~ 97 (606)
T 3t05_A 18 GSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHN 97 (606)
T ss_dssp ----CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCC
T ss_pred CcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEeec
Confidence 34467999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEeeCCeEEEEEEeC
Q 036921 103 KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNT 182 (527)
Q Consensus 103 ~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~~~v~~~v~~~ 182 (527)
..+++++|++|++++|+.+. ..|+.+.++++|++|++++++||+||+| ||+|.|+| .++ +++++.+.|+|++|
T Consensus 98 ~~~~~i~L~~G~~~~lt~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilid----DG~i~l~V-~~~-~~~~~~v~~~V~~g 170 (606)
T 3t05_A 98 MKDGIIELERGNEVIVSMNE-VEGTPEKFSVTYENLINDVQVGSYILLD----DGLIELQV-KDI-DHAKKEVKCDILNS 170 (606)
T ss_dssp BTTSEEECCSSCEEEEESSC-CCBCSSEEEBSCTTHHHHCCTTCEEEET----TTTEEEEE-EEE-ETTTTEEEEEECSC
T ss_pred CCCCCEEEcCCCEEEEEecC-cCCCCCEEEeccHHHHHhcCCCCEEEEe----CCeEEEEE-EEE-EecCCEEEEEEEEC
Confidence 76678999999999999986 5788899999999999999999999999 99999999 653 46889999999999
Q ss_pred cEecCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHh
Q 036921 183 ATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEG 262 (527)
Q Consensus 183 G~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~a 262 (527)
|.| +++||||+||..+++|+||+||++||+ |++++|+|||++||||+++||+++|++|.+.| .++.|||||||++|
T Consensus 171 G~L-~~~KgvNlPg~~~~lp~ltekD~~dl~-f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~--~~i~IiaKIE~~ea 246 (606)
T 3t05_A 171 GEL-KNKKGVNLPGVRVSLPGITEKDAEDIR-FGIKENVDFIAASFVRRPSDVLEIREILEEQK--ANISVFPKIENQEG 246 (606)
T ss_dssp CEE-ETTCBEECSSSCCCCCSSCHHHHHHHH-HHHHTTCSEEEETTCCSHHHHHHHHHHHHHTT--CCCEEEECCCSHHH
T ss_pred eEE-eCCceEECCCCccCCCCCChhHHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHHHHhcC--CCCeEEEEeCCHHH
Confidence 999 999999999999999999999999996 99999999999999999999999999999998 79999999999999
Q ss_pred HhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCC
Q 036921 263 LTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGS 341 (527)
Q Consensus 263 v~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~ 341 (527)
++|+|||++++|||||||||||+|+|++++|.+||+|+++|+++|||||+ |||||||++||+|||||++||||||+||+
T Consensus 247 v~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGa 326 (606)
T 3t05_A 247 IDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGT 326 (606)
T ss_dssp HHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCcH
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGR 421 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~ 421 (527)
||+|||+|||.|+||+|||++|++||+++|+..+|...|+.... ..+.+..++||.+|+++|.+++|++|++||.||+
T Consensus 327 DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ 404 (606)
T 3t05_A 327 DAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTK--LVETSLVNAIGISVAHTALNLNVKAIVAATESGS 404 (606)
T ss_dssp SEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHH--HSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSH
T ss_pred CEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhcc--ccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCch
Confidence 99999999999999999999999999999999888776654322 1245788999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHHHHHHHHHHcCC
Q 036921 422 AARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGV 501 (527)
Q Consensus 422 tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~~a~~~a~e~g~ 501 (527)
||+++|||||.|||||+ |++++++|||+|+|||+|++++.. .+.++++..++++++++|+
T Consensus 405 ta~~isr~RP~~pIia~-------------t~~~~~~r~l~L~~GV~p~~~~~~-------~~~~~~~~~a~~~~~~~g~ 464 (606)
T 3t05_A 405 TARTISKYRPHSDIIAV-------------TPSEETARQCSIVWGVQPVVKKGR-------KSTDALLNNAVATAVETGR 464 (606)
T ss_dssp HHHHHHHTCCSSEEEEE-------------ESCHHHHHHHHTSSSEEEEECCCC-------SSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhhCCCCCEEEE-------------cCCHHHHHhhhccCCeEEEEeCCC-------CCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999 689999999999999999998754 5789999999999999999
Q ss_pred CCCCCEEEEEEec-----CCCceEEEEEeCC
Q 036921 502 IKSHDRVVVCQKV-----GDASVVKIIELED 527 (527)
Q Consensus 502 v~~GD~VVvv~g~-----g~tn~ikv~~v~~ 527 (527)
+++||.||+++|+ |+||++||+.|++
T Consensus 465 ~~~GD~vVi~~G~p~g~~g~tN~~~v~~v~~ 495 (606)
T 3t05_A 465 VTNGDLIIITAGVPTGETGTTNMMKIHLVGD 495 (606)
T ss_dssp CCTTCEEEEEECSSTTTCSSCCEEEEEECCC
T ss_pred CCCCCEEEEEeCccCCCCCCccceEEEEecc
Confidence 9999999999997 8999999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=2e-130 Score=1046.78 Aligned_cols=463 Identities=34% Similarity=0.594 Sum_probs=420.1
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeEEeeeCC-C
Q 036921 27 PAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKS-E 105 (527)
Q Consensus 27 ~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~~~~~-~ 105 (527)
.|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++|++||+||||||+... +
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 80 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG 80 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCCceEEEEeCCCCEEEEEecCCC
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999997665 5
Q ss_pred CcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEeeCCeEEEEEEeCcEe
Q 036921 106 KAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 185 (527)
Q Consensus 106 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~~~v~~~v~~~G~l 185 (527)
+++.|++|++++|+.+....|+.+.++++|++|++++++||+||+| ||+|.|+| .+++++.+.|+|++||.|
T Consensus 81 ~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilid----DG~i~l~V----~~~~~~~i~~~v~~gG~L 152 (470)
T 1e0t_A 81 NDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVD----DGLIGMEV----TAIEGNKVICKVLNNGDL 152 (470)
T ss_dssp CCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEET----TTTEEEEE----EEEETTEEEEEECSCEEE
T ss_pred CceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEe----CCEEEEEE----EEEeCCeEEEEEecCcEE
Confidence 6799999999999998445688899999999999999999999999 99999999 456889999999999999
Q ss_pred cCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHc-CCCCCceEEEeecChHhHh
Q 036921 186 AGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKL-GDLSQTQIFAKIENIEGLT 264 (527)
Q Consensus 186 ~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~-~~~~~~~IiaKIEt~~av~ 264 (527)
+++||||+||..+++|+||++|.+||+ |++++|+|+|++|||++++|+++++++|.+. | .++.|||||||++|++
T Consensus 153 -~~~KgvNlPg~~~~lp~ltekD~~Di~-~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~--~~i~IiakIEt~eav~ 228 (470)
T 1e0t_A 153 -GENKGVNLPGVSIALPALAEKDKQDLI-FGCEQGVDFVAASFIRKRSDVIEIREHLKAHGG--ENIHIISKIENQEGLN 228 (470)
T ss_dssp -CSSCEEECSSCCCCCCSSCHHHHHHHH-HHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTC--TTCEEEEEECSHHHHH
T ss_pred -eCCceeecCCCcCCCCCCCcCCHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcC--CCceEEEEECCHHHHH
Confidence 999999999999999999999999996 9999999999999999999999999999988 7 7899999999999999
Q ss_pred hHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcE
Q 036921 265 HFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDA 343 (527)
Q Consensus 265 nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~ 343 (527)
|+|+|++++|||||||||||+|+|+++++.+||+|+.+||++|||+|+ |||||||++||+|||||++||+|||+||+||
T Consensus 229 nldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~Da 308 (470)
T 1e0t_A 229 NFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDA 308 (470)
T ss_dssp THHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSE
T ss_pred hHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccE
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred EEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCcHHH
Q 036921 344 ILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAA 423 (527)
Q Consensus 344 imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~tA 423 (527)
+|||+|||.|+||+|||++|++||+++|+.++|...|.... .+.+..++||.+|+++|.+++|++|++||.||+||
T Consensus 309 vMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~----~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta 384 (470)
T 1e0t_A 309 VMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDN----RKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSA 384 (470)
T ss_dssp EEECCC------CHHHHHHHHHHHHHHHTTCCCCCC-------------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhc----cccchHHHHHHHHHHHHHhcCCCEEEEECCChhHH
Confidence 99999999999999999999999999999876654443211 12346799999999999999999999999999999
Q ss_pred HHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHHHHHHHHHHcCCCC
Q 036921 424 RLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIK 503 (527)
Q Consensus 424 ~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~~a~~~a~e~g~v~ 503 (527)
+++|||||.|||||+ |++++++|||+|+|||+|++++.. ++.+++++.++++++++|+++
T Consensus 385 ~~isr~RP~~pI~a~-------------t~~~~~~r~l~l~~GV~p~~~~~~-------~~~~~~~~~a~~~~~~~g~~~ 444 (470)
T 1e0t_A 385 RAVRKYFPDATILAL-------------TTNEKTAHQLVLSKGVVPQLVKEI-------TSTDDFYRLGKELALQSGLAH 444 (470)
T ss_dssp HHHHTTCCSSBEEEE-------------ESCHHHHHHGGGSTTEEEEECSCC-------CSHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHhhCCCCCEEEE-------------CCCHHHHHHhhhhccceEEEecCC-------CCHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999 679999999999999999998754 578999999999999999999
Q ss_pred CCCEEEEEEec----CCCceEEEEEe
Q 036921 504 SHDRVVVCQKV----GDASVVKIIEL 525 (527)
Q Consensus 504 ~GD~VVvv~g~----g~tn~ikv~~v 525 (527)
+||.||+++|+ |+||++||+.+
T Consensus 445 ~GD~vvv~~g~~~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 445 KGDVVVMVSGALVPSGTTNTASVHVL 470 (470)
T ss_dssp TTCEEEEEECSSSCTTCCCEEEEEEC
T ss_pred CcCEEEEEeCCCCCCCccceEEEEEC
Confidence 99999999986 89999999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=3.5e-127 Score=1048.70 Aligned_cols=468 Identities=35% Similarity=0.577 Sum_probs=439.1
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeEEeeeCCCC
Q 036921 27 PAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEK 106 (527)
Q Consensus 27 ~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~~~~~~~ 106 (527)
+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++|+|++|++||+||||||+...++
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~~~v~il~Dl~GPkiR~g~~~~~ 81 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENG 81 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTTS
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeCCCCEEEEeccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999877666
Q ss_pred cEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEeeCCeEEEEEEeCcEec
Q 036921 107 AISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLA 186 (527)
Q Consensus 107 ~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~~~v~~~v~~~G~l~ 186 (527)
++.|++|++++|+.+. ..|+.+.++++|++|++++++||+||+| ||+|.|+| ++++ .+++.+.|+|++||.|
T Consensus 82 ~i~l~~G~~~~l~~~~-~~g~~~~i~v~y~~l~~~v~~G~~ilid----DG~i~l~V-~~~~-~~~~~i~~~v~~gg~l- 153 (587)
T 2e28_A 82 AIELKEGSKLVISMSE-VLGTPEKISVTYPSLIDDVSVGAKILLD----DGLISLEV-NAVD-KQAGEIVTTVLNGGVL- 153 (587)
T ss_dssp CBCCCSSCEEEEESSC-CCCCSSEEEBSCTTSTTTCCTTCEEEET----TTTEEEEE-EEEE-TTTTEEEEECCSCCCB-
T ss_pred cEEEecCCEEEEEecC-cCCCCCEEecchHHHHhhcCCCCEEEEe----CCEEEEEE-EEEe-cCCCeEEEEEecCCEE-
Confidence 8999999999999975 4688899999999999999999999999 99999999 4431 1788999999999999
Q ss_pred CCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhH
Q 036921 187 GSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHF 266 (527)
Q Consensus 187 ~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nl 266 (527)
+++||||+||..+++|+||++|.+||+ |++++|+|+|++|||++++|++++++++.++|. +++.||||||+++|++|+
T Consensus 154 ~~~KgvnlPg~~~~lp~ltekD~~di~-~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~-~~~~iiakIE~~eav~nl 231 (587)
T 2e28_A 154 KNKKGVNVPGVKVNLPGITEKDRADIL-FGIRQGIDFIAASFVRRASDVLEIRELLEAHDA-LHIQIIAKIENEEGVANI 231 (587)
T ss_dssp CSSCBEECTTSCCCCCSCCHHHHHHHH-HHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTC-TTSEEEEEECSHHHHHTH
T ss_pred cCCceeecCCCcCCCCCCCcccHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCC-CCceEEEEECCHHHHHhH
Confidence 999999999999999999999999996 999999999999999999999999999998872 389999999999999999
Q ss_pred HHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEE
Q 036921 267 DEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAIL 345 (527)
Q Consensus 267 deI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~im 345 (527)
|||++++|||||||||||+|+|++++|.+||+|+++|+++|||||+ |||||||++||+|||||++||+|||+||+||+|
T Consensus 232 deIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavM 311 (587)
T 2e28_A 232 DEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVM 311 (587)
T ss_dssp HHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceee
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred eCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCcHHHHH
Q 036921 346 LGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARL 425 (527)
Q Consensus 346 Ls~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~tA~~ 425 (527)
||+|||.|+||+|||++|++||+++|+.++|...|+.... ..+.+..++||.+|+++|.+++|++|++||.||+||++
T Consensus 312 LSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~ 389 (587)
T 2e28_A 312 LSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTK--ESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQM 389 (587)
T ss_dssp ESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHH
T ss_pred ecccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhc--ccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHH
Confidence 9999999999999999999999999998776544443221 12236789999999999999999999999999999999
Q ss_pred HHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHHHHHHHHHHcCCCCCC
Q 036921 426 IAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASGVIKSH 505 (527)
Q Consensus 426 is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~~a~~~a~e~g~v~~G 505 (527)
+|||||.|||||+ |++++++|||+|+|||+|++++.. ++.+++++.+++++++.|++++|
T Consensus 390 isr~Rp~~pI~a~-------------t~~~~~~r~l~l~~GV~p~~~~~~-------~~~~~~~~~a~~~~~~~G~~k~G 449 (587)
T 2e28_A 390 VAKYRPKAPIIAV-------------TSNEAVSRRLALVWGVYTKEAPHV-------NTTDEMLDVAVDAAVRSGLVKHG 449 (587)
T ss_dssp HHHTCCSSCEEEE-------------ESSHHHHHHGGGSTTEEEEECCCC-------CSHHHHHHHHHHHHHHHTCCCTT
T ss_pred HHhcCCCCCEEEE-------------CCCHHHHHHHHHhcCceEEecccc-------CCHHHHHHHHHHHHHhCCccccc
Confidence 9999999999999 679999999999999999998754 57899999999999999999999
Q ss_pred CEEEEEEec-----CCCceEEEEEeC
Q 036921 506 DRVVVCQKV-----GDASVVKIIELE 526 (527)
Q Consensus 506 D~VVvv~g~-----g~tn~ikv~~v~ 526 (527)
|.|++++|. |.||++|+..++
T Consensus 450 D~VVItqG~P~g~~G~TN~LkI~~Vg 475 (587)
T 2e28_A 450 DLVVITAGVPVGETGSTNLMKVHVIS 475 (587)
T ss_dssp CEEEEEECSSCSSCCCCCEEEEEECS
T ss_pred ceEEEecCcccCcCCCCceEEEEEEe
Confidence 999999985 789999998764
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=5.9e-127 Score=1011.73 Aligned_cols=442 Identities=24% Similarity=0.347 Sum_probs=420.6
Q ss_pred CCCCeEEEEecCCCCCCHH--HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCeEEeeeC
Q 036921 26 FPAMTKIVGTLGPKSRSVD--VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNK 103 (527)
Q Consensus 26 ~~~~tkIi~TiGp~~~~~~--~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~GpkiR~~~~ 103 (527)
.+|||||||||||+|+++| +|++|+++ |||||||||||++|+|+++++++|++++++|+|++|++||+||||||+..
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g~~vaIl~Dl~GPkIR~g~~ 91 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKNRPLAVIVDLKGPSIRVGST 91 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBCCBC
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCceEEEEeCCCCEEEECCC
Confidence 5699999999999999999 99999999 99999999999999999999999999999999999999999999999776
Q ss_pred CCCcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEeeCCeEEEEEEeCc
Q 036921 104 SEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTA 183 (527)
Q Consensus 104 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~~~v~~~v~~~G 183 (527)
. +++|++|++++|+++.. .++ +.++++|++|++++++||+||+| ||+|.|+| .+++++.+.|+|++||
T Consensus 92 ~--~v~L~~G~~~~lt~~~~-~~~-~~i~v~y~~l~~~v~~G~~Ilid----DG~i~l~V----~~~~~~~v~~~V~~gG 159 (461)
T 3qtg_A 92 S--PINVQEGEVVKFKLSDK-SDG-TYIPVPNKAFFSAVEQNDVILML----DGRLRLKV----TNTGSDWIEAVAESSG 159 (461)
T ss_dssp S--CEEECTTCEEEEEECSB-CCS-SSEEECCHHHHHHCCTTCEEEEG----GGTEEEEE----EEECSSEEEEEESSCE
T ss_pred C--CEEEeCCCEEEEEecCC-CCC-cEEEcchHHHHhhcCCCCEEEEe----CCEEEEEE----EEEECCEEEEEEEECC
Confidence 3 49999999999998763 344 78999999999999999999999 99999999 5568899999999999
Q ss_pred EecCCCcccccCCccccCCCCCHhhHHHHHh--hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChH
Q 036921 184 TLAGSLFTLHASQIRIELPTLSDKDKEVISS--WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIE 261 (527)
Q Consensus 184 ~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~--~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~ 261 (527)
.| +++||||+||..+++|+||+||++|| + |++++|+|+|++|||++++|++++|++|.+.| .++.|||||||++
T Consensus 160 ~L-~~~KgvNlPg~~~~lp~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g--~~~~iiaKIE~~e 235 (461)
T 3qtg_A 160 VI-TGGKAIVVEGKDYDISTPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELG--FQSQVAVKIETKG 235 (461)
T ss_dssp EE-CTTCBEEETTCCCCCCSSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTT--CCCEEEEEECSHH
T ss_pred Ee-cCCCceecCCCCCCCCCCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcC--CCceEEEEECCHH
Confidence 99 99999999999999999999999999 6 89999999999999999999999999999998 7899999999999
Q ss_pred hHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhC
Q 036921 262 GLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDG 340 (527)
Q Consensus 262 av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g 340 (527)
|++|+|||++++|||||||||||+|+|++++|.+||+|+++|+++|||||+ |||||||++||+|||||++||+|||+||
T Consensus 236 av~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dG 315 (461)
T 3qtg_A 236 AVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMG 315 (461)
T ss_dssp HHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCc
Q 036921 341 SDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSG 420 (527)
Q Consensus 341 ~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG 420 (527)
+||+|||+|||.|+||+|||++|++||+++|+...|. +.+.+..+++|.+|+++|.+++|+ |++||.||
T Consensus 316 aDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~----------~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T~SG 384 (461)
T 3qtg_A 316 VDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQS----------PLLQNSRDRFAKGLVELAQDLGAN-ILVFSMSG 384 (461)
T ss_dssp CSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCCCC----------CCCCSHHHHHHHHHHHHHHHHTCE-EEEECSSS
T ss_pred CcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhhhc----------cCCCCHHHHHHHHHHHHHHhcCCC-EEEECCCc
Confidence 9999999999999999999999999999999986551 234578899999999999999999 99999999
Q ss_pred HHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHHHHHHHHHHcC
Q 036921 421 RAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKASG 500 (527)
Q Consensus 421 ~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~~a~~~a~e~g 500 (527)
+||+++|||||.|||||+ |++++++|||+|+|||+|++++ . .+.|++++.+.+++++.|
T Consensus 385 ~tA~~vsr~RP~~pIia~-------------T~~~~~~r~l~l~~GV~p~~~~-~-------~~~d~~~~~a~~~~~~~g 443 (461)
T 3qtg_A 385 TLARRIAKFRPRGVVYVG-------------TPNVRVARSLSIVWALEPLYIP-A-------ENYEEGLEKLISLKGTTP 443 (461)
T ss_dssp HHHHHHHTTCCSSCEEEE-------------ESCHHHHHHHTTSTTEEEEECC-C-------SSHHHHHHHHHHHHCCSS
T ss_pred HHHHHHHhhCCCCCEEEe-------------CCCHHHHhhceeccceEEEEeC-C-------CCHHHHHHHHHHHHHHCC
Confidence 999999999999999999 6899999999999999999987 3 578999999999998888
Q ss_pred CCCCCCEEEEEEec-CCCceEEEE
Q 036921 501 VIKSHDRVVVCQKV-GDASVVKII 523 (527)
Q Consensus 501 ~v~~GD~VVvv~g~-g~tn~ikv~ 523 (527)
||+++|. |+||++||.
T Consensus 444 -------vvit~g~p~~TN~~~v~ 460 (461)
T 3qtg_A 444 -------FVATYGIRGGVHSVKVK 460 (461)
T ss_dssp -------EEEEECCTTSCCEEEEE
T ss_pred -------EEEEeccCCCCeEEEEE
Confidence 8888888 999999985
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=2.8e-125 Score=1014.84 Aligned_cols=475 Identities=31% Similarity=0.556 Sum_probs=441.9
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcC-CceEEEecCCCCeEEeeeC
Q 036921 25 FFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQVVNK 103 (527)
Q Consensus 25 ~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~-~~v~i~~Dl~GpkiR~~~~ 103 (527)
..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++++++| +|++|++||+||||||+..
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 356999999999999999999999999999999999999999999999999999999999 9999999999999999765
Q ss_pred CCC-cEEeecCCEEEEeeCCC--CCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEe-eCCeEEEEE
Q 036921 104 SEK-AISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV-KGNDVTCVI 179 (527)
Q Consensus 104 ~~~-~i~l~~G~~v~l~~~~~--~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~-~~~~v~~~v 179 (527)
.++ ++.|++|++++|+++.. ..|+.+.++++|++|++++++||+||+| ||+|.|+| .++ +++.+.|+|
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilid----DG~i~l~V----~~~~~~~~v~~~v 167 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVD----DGVLSFQV----LEVVDDKTLKVKA 167 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEET----TTTEEEEC----CBCCC--CEEEEB
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEe----CCEEEEEE----EEEccCCeEEEEE
Confidence 543 79999999999999753 3688889999999999999999999999 99999999 556 778999999
Q ss_pred EeCcEecCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecC
Q 036921 180 KNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIEN 259 (527)
Q Consensus 180 ~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt 259 (527)
++||.| +++||||+||..+++|+||++|.+||+ |+++.|+|+|++|||++++|++++++++.+.| .++.|||||||
T Consensus 168 ~~gG~L-~~~KgvNlPg~~~~lp~lt~~D~~DI~-~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~--~~i~IiakIEt 243 (500)
T 1a3w_A 168 LNAGKI-CSHKGVNLPGTDVDLPALSEKDKEDLR-FGVKNGVHMVFASFIRTANDVLTIREVLGEQG--KDVKIIVKIEN 243 (500)
T ss_dssp CSCCCC-CSSCBEECTTCCCCCCSSCHHHHHHHH-HHHHHTCSEEEECSCCSHHHHHHHHHHHHHHH--TTSEEEEEECS
T ss_pred ecCCEE-eCCCCCcCCCCccCCCCCChhHHHHHH-HHHHcCCCEEEECCCCCHHHHHHHHHHHHhcC--CCcEEEEEECC
Confidence 999999 999999999999999999999999996 89999999999999999999999999999887 78999999999
Q ss_pred hHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH
Q 036921 260 IEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL 338 (527)
Q Consensus 260 ~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~ 338 (527)
++|++|+++|++++|||||||||||+|+|.++++.+|++|+.+||++|||+|+ |||||||+.+|.|||||++|++|++.
T Consensus 244 ~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~ 323 (500)
T 1a3w_A 244 QQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAIL 323 (500)
T ss_dssp SHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHH
T ss_pred hHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECC
Q 036921 339 DGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTS 418 (527)
Q Consensus 339 ~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~ 418 (527)
+|+|++|||+||+.|+||+|||++|++||+++|+.++|...|.......+.+.+..++||.+|+++|.+++|++|++||.
T Consensus 324 ~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~ 403 (500)
T 1a3w_A 324 DGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLST 403 (500)
T ss_dssp HTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECS
T ss_pred hCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999999999999999999999999999999998877665654321122234678999999999999999999999999
Q ss_pred CcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCCCCccCHHHHHHHHHHHHHH
Q 036921 419 SGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTNATNESVLKVALDHGKA 498 (527)
Q Consensus 419 sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~~~~~~~e~~i~~a~~~a~e 498 (527)
||+||+++|||||+|||||+ |++++++|||+|+|||+|++++.....+ |.++.+++++.+++++++
T Consensus 404 sG~ta~~isr~RP~~pI~a~-------------t~~~~~~r~l~l~~GV~p~~~~~~~~~~-~~~~~~~~~~~a~~~~~~ 469 (500)
T 1a3w_A 404 SGTTPRLVSKYRPNCPIILV-------------TRCPRAARFSHLYRGVFPFVFEKEPVSD-WTDDVEARINFGIEKAKE 469 (500)
T ss_dssp SSHHHHHHHHTCCSSCEEEE-------------ESCTTHHHHGGGSTTEEEEECCSCCCSC-TTTHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHhhCCCCCEEEE-------------cCCHHHHHhhhhhCCeEEEEeccccccc-ccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999 6799999999999999999987643333 356789999999999999
Q ss_pred cCCCCCCCEEEEEEec----CCCceEEEEEe
Q 036921 499 SGVIKSHDRVVVCQKV----GDASVVKIIEL 525 (527)
Q Consensus 499 ~g~v~~GD~VVvv~g~----g~tn~ikv~~v 525 (527)
+|++++||.||+++|+ |+||++||+.+
T Consensus 470 ~g~~~~GD~vvv~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 470 FGILKKGDTYVSIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp TTCSCTTCEEEEEECCCTTTCCCCEEEEEEC
T ss_pred CCCCCCcCEEEEEecccCCCCCCceEEEEEC
Confidence 9999999999999997 89999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.72 E-value=2.3e-18 Score=178.05 Aligned_cols=149 Identities=15% Similarity=0.143 Sum_probs=126.5
Q ss_pred HHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHc--CC----------------------------CCCceEEEeecC
Q 036921 210 EVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKL--GD----------------------------LSQTQIFAKIEN 259 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~--~~----------------------------~~~~~IiaKIEt 259 (527)
.+|+ ++++.|+++|++|||+|++|++++++++... |. +.++.|+++|||
T Consensus 108 ~di~-~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt 186 (339)
T 1izc_A 108 VSLS-TALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIES 186 (339)
T ss_dssp HHHH-HHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECS
T ss_pred HHHH-HHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEECh
Confidence 4775 6789999999999999999999999988531 10 024789999999
Q ss_pred hHhHhhHHHHHHh--CCEEEEeCCCCcCC--------CCc---hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCC
Q 036921 260 IEGLTHFDEILQA--ADGIILSRGNLGID--------LPP---EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRP 325 (527)
Q Consensus 260 ~~av~nldeI~~~--sDgImIaRgDLg~e--------~~~---~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~P 325 (527)
++|++|+++|+++ .|+++||++||+.+ +|. +.+..++++++.+|+++|||++. +. .|
T Consensus 187 ~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~~---------d~ 257 (339)
T 1izc_A 187 VKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGAL---------SV 257 (339)
T ss_dssp HHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEECS---------SG
T ss_pred HHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEecC---------CH
Confidence 9999999999975 69999999999999 886 78999999999999999999976 42 22
Q ss_pred ChHhhhhHHHHHHhCCcEEEeCCcccc--CCChHHHHHHHHHHHHHHhhcc
Q 036921 326 TRAEATDVANAVLDGSDAILLGAETLR--GLYPVETISIVGKICAEAEKVF 374 (527)
Q Consensus 326 traEv~Dv~nav~~g~D~imLs~Eta~--G~yP~e~V~~~~~i~~~aE~~~ 374 (527)
.++.+++..|+|+++++.++.. +.| .+.|+++++|+.++|...
T Consensus 258 -----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~ 302 (339)
T 1izc_A 258 -----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQG 302 (339)
T ss_dssp -----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC--
T ss_pred -----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 5778899999999999998876 666 788999999998877753
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.63 E-value=1.7e-16 Score=160.76 Aligned_cols=128 Identities=19% Similarity=0.223 Sum_probs=105.3
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHH-----cCC--------------------CCCceEEEeecChHh
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSK-----LGD--------------------LSQTQIFAKIENIEG 262 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~-----~~~--------------------~~~~~IiaKIEt~~a 262 (527)
|..+|+ ++++.|+++|++|||+|++|++++++.+.. +|. +.++.|++||||++|
T Consensus 100 d~~di~-~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~a 178 (287)
T 2v5j_A 100 DPVQIK-QLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREA 178 (287)
T ss_dssp CHHHHH-HHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHH
T ss_pred CHHHHH-HHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHH
Confidence 345785 678999999999999999999999887531 110 024789999999999
Q ss_pred HhhHHHHHHh--CCEEEEeCCCCcCCCCc------hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhH
Q 036921 263 LTHFDEILQA--ADGIILSRGNLGIDLPP------EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDV 333 (527)
Q Consensus 263 v~nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv 333 (527)
++|+++|+++ .|+++||++||+.++|. +++..++++++.+|+++|||+++ +. .| ...
T Consensus 179 v~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~~---------d~-----~~a 244 (287)
T 2v5j_A 179 MKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIA---------NE-----QLA 244 (287)
T ss_dssp HHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEECC---------CH-----HHH
T ss_pred HHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEecC---------CH-----HHH
Confidence 9999999985 59999999999999986 57999999999999999999986 32 23 234
Q ss_pred HHHHHhCCcEEEeCCcc
Q 036921 334 ANAVLDGSDAILLGAET 350 (527)
Q Consensus 334 ~nav~~g~D~imLs~Et 350 (527)
..++..|++.+.++.++
T Consensus 245 ~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 245 KRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHTTCSEEEEEEHH
T ss_pred HHHHHhCCCEEEECcHH
Confidence 56788999999888653
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.63 E-value=1.9e-16 Score=158.80 Aligned_cols=127 Identities=21% Similarity=0.273 Sum_probs=105.0
Q ss_pred HHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHH-----cCC--------------------CCCceEEEeecChHhH
Q 036921 209 KEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSK-----LGD--------------------LSQTQIFAKIENIEGL 263 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~-----~~~--------------------~~~~~IiaKIEt~~av 263 (527)
..+|+ ++++.|+|+|++|||+|++|++++.+.+.. +|. +.++.++++|||++|+
T Consensus 80 ~~~i~-~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 80 KPLIK-QVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp HHHHH-HHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred HHHHH-HHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 36675 678999999999999999999999887631 000 0247899999999999
Q ss_pred hhHHHHHHh--CCEEEEeCCCCcCCCCc------hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH
Q 036921 264 THFDEILQA--ADGIILSRGNLGIDLPP------EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA 334 (527)
Q Consensus 264 ~nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~ 334 (527)
+|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++ +. .| ....
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~~---------d~-----~~a~ 224 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV---------AP-----DMAQ 224 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEECS---------SH-----HHHH
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEecC---------CH-----HHHH
Confidence 999999987 69999999999999987 57999999999999999999986 32 22 2446
Q ss_pred HHHHhCCcEEEeCCcc
Q 036921 335 NAVLDGSDAILLGAET 350 (527)
Q Consensus 335 nav~~g~D~imLs~Et 350 (527)
.++..|++.+..+.++
T Consensus 225 ~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 225 QCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHTTCCEEEEEEHH
T ss_pred HHHHCCCCEEEEchHH
Confidence 6788999999888553
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.62 E-value=6.5e-16 Score=154.40 Aligned_cols=127 Identities=19% Similarity=0.218 Sum_probs=106.5
Q ss_pred HHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHc--C-----------------------CCCCceEEEeecChHhHh
Q 036921 210 EVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKL--G-----------------------DLSQTQIFAKIENIEGLT 264 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~--~-----------------------~~~~~~IiaKIEt~~av~ 264 (527)
.||+ ++++.|+|+|++|||+|++|++++.+.++.. | .+.++.++++|||++|+.
T Consensus 79 ~di~-~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~ 157 (261)
T 3qz6_A 79 AHVQ-RLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVE 157 (261)
T ss_dssp HHHH-HHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred HHHH-HHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHH
Confidence 5775 6799999999999999999999999887320 0 014689999999999999
Q ss_pred hHHHHHHh--CCEEEEeCCCCcCCCCc------hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH
Q 036921 265 HFDEILQA--ADGIILSRGNLGIDLPP------EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN 335 (527)
Q Consensus 265 nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n 335 (527)
|+++|+++ .|+++||++||+.+++. +.+..++++++.+|+++|||+++ .. .|..++ ..
T Consensus 158 ~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~~---------~~~~~~----~~ 224 (261)
T 3qz6_A 158 DIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFTA---------ADAAKM----GW 224 (261)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEES---------SCGGGG----HH
T ss_pred HHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeC---------CHHHHH----HH
Confidence 99999954 69999999999999987 37999999999999999999987 53 454432 45
Q ss_pred HHHhCCcEEEeCCcc
Q 036921 336 AVLDGSDAILLGAET 350 (527)
Q Consensus 336 av~~g~D~imLs~Et 350 (527)
.+..|++.+.++.++
T Consensus 225 ~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 225 AVERGAQMLLWSGDV 239 (261)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHCCCCEEEEhhHH
Confidence 578899999999775
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.60 E-value=9.7e-16 Score=152.67 Aligned_cols=125 Identities=17% Similarity=0.230 Sum_probs=105.6
Q ss_pred HHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHH--------------------------cCCCCCceEEEeecChHh
Q 036921 209 KEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSK--------------------------LGDLSQTQIFAKIENIEG 262 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~--------------------------~~~~~~~~IiaKIEt~~a 262 (527)
..+|+ ++++.|+++|++|||+|++|++++++.+.. .+ .++.++++|||++|
T Consensus 81 ~~~i~-~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~--~~~~v~~~IEt~~a 157 (256)
T 1dxe_A 81 PVIIK-RLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSN--KNITILVQIESQQG 157 (256)
T ss_dssp HHHHH-HHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHT--TSCEEEEEECSHHH
T ss_pred HHHHH-HHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcC--cccEEEEEECCHHH
Confidence 34475 678999999999999999999999988741 12 56889999999999
Q ss_pred HhhHHHHHHh--CCEEEEeCCCCcCCCCc------hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhH
Q 036921 263 LTHFDEILQA--ADGIILSRGNLGIDLPP------EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDV 333 (527)
Q Consensus 263 v~nldeI~~~--sDgImIaRgDLg~e~~~------~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv 333 (527)
+.|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++ +. .| .+.
T Consensus 158 v~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~~---------d~-----~~~ 223 (256)
T 1dxe_A 158 VDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP---------VE-----ADA 223 (256)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEECC---------SH-----HHH
T ss_pred HHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEecC---------CH-----HHH
Confidence 9999999984 69999999999999987 57999999999999999999986 32 12 244
Q ss_pred HHHHHhCCcEEEeCCcc
Q 036921 334 ANAVLDGSDAILLGAET 350 (527)
Q Consensus 334 ~nav~~g~D~imLs~Et 350 (527)
..++..|++.+.++.++
T Consensus 224 ~~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 224 RRYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHHTTCCEEEEEEHH
T ss_pred HHHHHcCCCEEEechHH
Confidence 66788999999888654
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.55 E-value=7.8e-15 Score=148.17 Aligned_cols=133 Identities=15% Similarity=0.120 Sum_probs=107.8
Q ss_pred HhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh--CCEEEEeCCCC
Q 036921 206 DKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA--ADGIILSRGNL 283 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~--sDgImIaRgDL 283 (527)
+++..||. ++++ |+|+|++|||+|++|++++++++...| .++.++++|||++|+.|+++|+.. .|+++||++||
T Consensus 81 ~~~~~dl~-~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g--~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL 156 (284)
T 1sgj_A 81 PYFEDDLS-VLTP-ELSGVVVPKLEMGAEARQVAQMLQERS--LPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDY 156 (284)
T ss_dssp TTHHHHGG-GCCT-TSSEEEECSCCSHHHHHHHHHHHHHTT--CCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHH
T ss_pred HhHHHHHH-HHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcC--CCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHH
Confidence 45788996 7889 999999999999999999999998776 678999999999999999999963 49999999999
Q ss_pred cCCCCc------hhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 284 GIDLPP------EKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 284 g~e~~~------~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+.+++. +.+..++++++.+|+++|||++.+ +...+ .-...=..+...+...|+||=+.-
T Consensus 157 ~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~-v~~~~----~d~~~l~~~~~~~~~~Gf~Gk~~i 221 (284)
T 1sgj_A 157 TTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI-VVTAL----NDPETFRADAEQGRALGYSGKLCI 221 (284)
T ss_dssp HHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC-CCCCC----SCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC-CcCCC----CCHHHHHHHHHHHHhCCCCccccc
Confidence 999987 679999999999999999999641 11011 000111145567788999876554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.26 E-value=9.8e-12 Score=127.74 Aligned_cols=135 Identities=15% Similarity=0.123 Sum_probs=108.5
Q ss_pred CCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHH-------cCC--CCCceEEEeecChHhHhhHHHHHH
Q 036921 201 LPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSK-------LGD--LSQTQIFAKIENIEGLTHFDEILQ 271 (527)
Q Consensus 201 lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~-------~~~--~~~~~IiaKIEt~~av~nldeI~~ 271 (527)
-|.+...|.+.|. .+.+.|.+.|++|||+|++|++++++++.. .|. +.++.++++|||+.|+.|+++|++
T Consensus 117 ~p~~~~~ql~Ai~-ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~ 195 (324)
T 2xz9_A 117 RPDIFKTQLRAIL-RASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAK 195 (324)
T ss_dssp CHHHHHHHHHHHH-HHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTT
T ss_pred chhhHHHHHHHHH-HHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHH
Confidence 3456677888886 678899999999999999998888887742 231 136899999999999999999999
Q ss_pred hCCEEEEeCCCCcC-CCC---------------chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH
Q 036921 272 AADGIILSRGNLGI-DLP---------------PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA 334 (527)
Q Consensus 272 ~sDgImIaRgDLg~-e~~---------------~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~ 334 (527)
+.|++.||..||+. .++ -+.|..+.++++.+|+++|||+.+ .++ .. .| ..+.
T Consensus 196 ~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~----~~--dp-----~~~~ 264 (324)
T 2xz9_A 196 EVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEM----AG--DP-----LAAV 264 (324)
T ss_dssp TCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG----GG--CH-----HHHH
T ss_pred hCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCcc----CC--CH-----HHHH
Confidence 99999999999995 333 246888999999999999999998 763 11 22 3446
Q ss_pred HHHHhCCcEEEeC
Q 036921 335 NAVLDGSDAILLG 347 (527)
Q Consensus 335 nav~~g~D~imLs 347 (527)
.++..|+|.+..+
T Consensus 265 ~l~~lG~~~~si~ 277 (324)
T 2xz9_A 265 ILLGLGLDEFSMS 277 (324)
T ss_dssp HHHHHTCCEEEEC
T ss_pred HHHHCCCCEEEEC
Confidence 6778899997666
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.17 E-value=5.4e-11 Score=121.86 Aligned_cols=132 Identities=22% Similarity=0.287 Sum_probs=103.5
Q ss_pred CHhhHHHHHhhcccccc--cEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhC---CEEEEe
Q 036921 205 SDKDKEVISSWGVQNKI--DFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAA---DGIILS 279 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~--d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~s---DgImIa 279 (527)
|++...||. ..++.|. |+|++|+|++++|++.+.+++...+ .++.++++|||++|+.|+++|++++ |++++|
T Consensus 113 t~~~~~Dl~-~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~--~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G 189 (316)
T 3qll_A 113 TRAGIEDIH-ALLECGSLPDYLVLPKTESAAHLQILDRLMMFAG--SDTRLIGIIESVRGLNAVESIAAATPKLAGLIFG 189 (316)
T ss_dssp SHHHHHHHH-HHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC----CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEEC
T ss_pred CchhHHHHH-HHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEEC
Confidence 466677886 5678774 9999999999999999999987665 5789999999999999999999843 799999
Q ss_pred CCCCcCCCCc----hhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHh--hhhHHHHHHhCCcEEEe
Q 036921 280 RGNLGIDLPP----EKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAE--ATDVANAVLDGSDAILL 346 (527)
Q Consensus 280 RgDLg~e~~~----~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraE--v~Dv~nav~~g~D~imL 346 (527)
..||..+++. +.+.++..+++.+|+++|+++|.+- ...+ ...| ..+...+...|++|=+.
T Consensus 190 ~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~v-~~~~------~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 190 AADMAADIGAASTWEPLALARARLVSACAMNGIPAIDAP-FFDV------HDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEECC-CSCS------SCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeecc-ccCc------CCHHHHHHHHHHHHHCCCCeEEe
Confidence 9999998876 4677888999999999999996521 1101 1111 24666777889987554
No 19
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.07 E-value=4.4e-10 Score=115.87 Aligned_cols=135 Identities=11% Similarity=0.060 Sum_probs=99.3
Q ss_pred CHhhHHHHHhhcccc---cccEEEecCCCCHHHHHHHHHHHHHc----CCCCCceEEEeecChHhHhhHHHHHHhC--CE
Q 036921 205 SDKDKEVISSWGVQN---KIDFLSLSYTRHAEDVRQAREYLSKL----GDLSQTQIFAKIENIEGLTHFDEILQAA--DG 275 (527)
Q Consensus 205 t~~D~~di~~~~~~~---g~d~I~~sfV~s~~dv~~lr~~l~~~----~~~~~~~IiaKIEt~~av~nldeI~~~s--Dg 275 (527)
|++-..||. ..++. |+|+|++|+|++++|++.+.+++... |....+.++++|||++|+.|+++|++.. |+
T Consensus 94 t~~~~~DL~-av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~ 172 (332)
T 3qqw_A 94 HPAWRQDVD-IIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEV 172 (332)
T ss_dssp STTHHHHHH-HHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEE
T ss_pred ChHHHHHHH-HHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCE
Confidence 344455664 34554 99999999999999999999888643 3223688999999999999999999543 89
Q ss_pred EEEeCCCCcCCCCc---------------hhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHh--hhhHHHHH-
Q 036921 276 IILSRGNLGIDLPP---------------EKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAE--ATDVANAV- 337 (527)
Q Consensus 276 ImIaRgDLg~e~~~---------------~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraE--v~Dv~nav- 337 (527)
+++|.+||..+++. +.+..+..+++.+|+++|+++|.+-.. .-...| ..+...+.
T Consensus 173 L~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~v~~-------d~~D~~gl~~~~~~~~~ 245 (332)
T 3qqw_A 173 LDFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHNVCL-------NLKDAEVIASDACRARN 245 (332)
T ss_dssp EEECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEECCCS-------CSSCHHHHHHHHHHHHH
T ss_pred EEEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccCCcc-------cccCHHHHHHHHHHHHH
Confidence 99999999888764 126778889999999999998752110 011112 14456666
Q ss_pred HhCCcEEEeC
Q 036921 338 LDGSDAILLG 347 (527)
Q Consensus 338 ~~g~D~imLs 347 (527)
..|+||-+.-
T Consensus 246 ~lGf~Gk~~I 255 (332)
T 3qqw_A 246 EFGFLRMWSI 255 (332)
T ss_dssp HHCCCEEEES
T ss_pred hCCCCccccc
Confidence 6799976553
No 20
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.03 E-value=4.4e-10 Score=112.79 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=97.1
Q ss_pred HhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhC--CEEEEeCCCC
Q 036921 206 DKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAA--DGIILSRGNL 283 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~s--DgImIaRgDL 283 (527)
++-..||. ..++.|+|+|++|+|+|++|++.+. ++.++++|||++|+.|+++|+... ||+++|+.||
T Consensus 71 ~~~~~dl~-~~~~~g~~gi~lPKv~s~~~v~~~~----------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl 139 (273)
T 1u5h_A 71 ADQARDLE-ALAGTAYTTVMLPKAESAAQVIELA----------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDL 139 (273)
T ss_dssp HHHHHHHH-HHHTSCCCEEEETTCCCHHHHHTTT----------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHH
T ss_pred hHHHHHHH-HHHhcCCCEEEeCCCCCHHHHHHHh----------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHH
Confidence 45567775 5688999999999999999999763 478999999999999999999643 7999999999
Q ss_pred cCCCCch-----------hHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHh-hhhHHHHHHhCCcEEEeC
Q 036921 284 GIDLPPE-----------KVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAE-ATDVANAVLDGSDAILLG 347 (527)
Q Consensus 284 g~e~~~~-----------~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraE-v~Dv~nav~~g~D~imLs 347 (527)
+.++|.. .+..+..+++.+|+++|++++.+-. ......+- ..+...+...|+||-+.-
T Consensus 140 ~~~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v~------~~~~d~~gl~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 140 IATLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAVH------LDILDVEGLQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp HHHHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECCC------SCTTCHHHHHHHHHHHHHHTCSEEEES
T ss_pred HHHhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCCc------CCCCCHHHHHHHHHHHHhCCCCceeec
Confidence 9888752 3778889999999999999864210 00111111 145667788899987774
No 21
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.01 E-value=4.8e-10 Score=127.68 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=109.8
Q ss_pred CCHhhHHHHHhhccc-cc--ccEEEecCCCCHHHHHHHHHHHHHcCCC--CC-ceEEEeecChHhHhhHHHHHHhCCEEE
Q 036921 204 LSDKDKEVISSWGVQ-NK--IDFLSLSYTRHAEDVRQAREYLSKLGDL--SQ-TQIFAKIENIEGLTHFDEILQAADGII 277 (527)
Q Consensus 204 lt~~D~~di~~~~~~-~g--~d~I~~sfV~s~~dv~~lr~~l~~~~~~--~~-~~IiaKIEt~~av~nldeI~~~sDgIm 277 (527)
+.+.+.+.|. .+.+ .| .+.|++|||+|+++++.+++++...|.. .+ +.++++||++.|+.|+|+|+++.|++.
T Consensus 622 ~~~~ql~Ai~-ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~s 700 (794)
T 2ols_A 622 CFALECKALK-RVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFS 700 (794)
T ss_dssp HHHHHHHHHH-HHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEE
T ss_pred HHHHHHHHHH-HHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 4455777776 4677 67 7999999999999999999999876631 23 889999999999999999999999999
Q ss_pred EeCCCCcCC-CCc---------------hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhC
Q 036921 278 LSRGNLGID-LPP---------------EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDG 340 (527)
Q Consensus 278 IaRgDLg~e-~~~---------------~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g 340 (527)
||..||+.. ++. +.|..+.++++.+||++|||+.+ .++-- + .| ..+..++..|
T Consensus 701 iGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~---~--dp-----~~~~~~~~~G 770 (794)
T 2ols_A 701 IGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPS---D--HP-----DFAKWLVEEG 770 (794)
T ss_dssp EEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHH---H--CH-----HHHHHHHHHT
T ss_pred ECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCC---C--CH-----HHHHHHHHCC
Confidence 999999987 664 46889999999999999999998 76410 0 11 2246678889
Q ss_pred CcEEEeCCc
Q 036921 341 SDAILLGAE 349 (527)
Q Consensus 341 ~D~imLs~E 349 (527)
+|.+.++..
T Consensus 771 ~~~~s~~p~ 779 (794)
T 2ols_A 771 IESVSLNPD 779 (794)
T ss_dssp CCEEEECGG
T ss_pred CCEEEECHh
Confidence 999988743
No 22
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.97 E-value=7.4e-10 Score=114.48 Aligned_cols=134 Identities=13% Similarity=0.113 Sum_probs=94.4
Q ss_pred hhHHHHHhhccc---ccccEEEecCCCCHHHHHHHHHHHHHc----CCCCCceEEEeecChHhHhhHHHHHHhC--CEEE
Q 036921 207 KDKEVISSWGVQ---NKIDFLSLSYTRHAEDVRQAREYLSKL----GDLSQTQIFAKIENIEGLTHFDEILQAA--DGII 277 (527)
Q Consensus 207 ~D~~di~~~~~~---~g~d~I~~sfV~s~~dv~~lr~~l~~~----~~~~~~~IiaKIEt~~av~nldeI~~~s--DgIm 277 (527)
+-..||. ..++ .|+|+|++|+|++++|++.+.+++... |....+.++++|||++|+.|+++|++.. |+++
T Consensus 95 ~~~~DL~-al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~ 173 (339)
T 3r4i_A 95 HWRDDVR-LILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALS 173 (339)
T ss_dssp THHHHHH-HHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEE
T ss_pred HHHHHHH-HhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEE
Confidence 3345554 3344 389999999999999999999887642 3224688999999999999999999543 8999
Q ss_pred EeCCCCcCCCCch---------------hHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHHHH-HhCC
Q 036921 278 LSRGNLGIDLPPE---------------KVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAV-LDGS 341 (527)
Q Consensus 278 IaRgDLg~e~~~~---------------~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~nav-~~g~ 341 (527)
+|.+||..+++.. .+..+..+++.+|+++|++++.+- ...| ..+. .-..+...+. ..|+
T Consensus 174 ~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~v-~~d~-~D~~---gl~~~~~~~~~~lGf 248 (339)
T 3r4i_A 174 FGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHNV-STEV-RDMS---VVANDAARARNEFGY 248 (339)
T ss_dssp ECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEECC-CCCS-SCHH---HHHHHHHHHHHTTCC
T ss_pred ECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccCC-CcCC-CChH---HHHHHHHHHHHhCCC
Confidence 9999999888641 256788899999999999986511 1011 1111 1112444554 5799
Q ss_pred cEEEe
Q 036921 342 DAILL 346 (527)
Q Consensus 342 D~imL 346 (527)
||=+.
T Consensus 249 ~Gk~~ 253 (339)
T 3r4i_A 249 TRMWS 253 (339)
T ss_dssp SEEEE
T ss_pred Cccee
Confidence 87554
No 23
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.90 E-value=3.4e-09 Score=116.28 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=106.6
Q ss_pred CCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHH-------HcCC--CCCceEEEeecChHhHhhHHHHHHhC
Q 036921 203 TLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLS-------KLGD--LSQTQIFAKIENIEGLTHFDEILQAA 273 (527)
Q Consensus 203 ~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~-------~~~~--~~~~~IiaKIEt~~av~nldeI~~~s 273 (527)
.+...+.+.|. .+.+.|...|++|||+|+++++++++++. ..|. ++++.+.++||++.|+.++|+|++..
T Consensus 368 ~if~~QlrAi~-rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 446 (575)
T 2hwg_A 368 EILRDQLRAIL-RASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEV 446 (575)
T ss_dssp HHHHHHHHHHH-HHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTC
T ss_pred HHHHHHHHHHH-HHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 34445667775 56788999999999999999988888774 2232 13688999999999999999999999
Q ss_pred CEEEEeCCCCcC----------CCCc------hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHH
Q 036921 274 DGIILSRGNLGI----------DLPP------EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANA 336 (527)
Q Consensus 274 DgImIaRgDLg~----------e~~~------~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~na 336 (527)
|++.||..||+. .++. +.|..+.++++.+|+++|||+.+ .++ - ..|. .+...
T Consensus 447 Df~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~----a--gdp~-----~~~~l 515 (575)
T 2hwg_A 447 DFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGEL----A--GDER-----ATLLL 515 (575)
T ss_dssp SEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTT----T--TCTT-----THHHH
T ss_pred CEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCC----C--CCHH-----HHHHH
Confidence 999999999988 4442 57888999999999999999998 652 2 2342 33567
Q ss_pred HHhCCcEEEeCC
Q 036921 337 VLDGSDAILLGA 348 (527)
Q Consensus 337 v~~g~D~imLs~ 348 (527)
+..|.|.+..+.
T Consensus 516 ~~lG~~~~S~~p 527 (575)
T 2hwg_A 516 LGMGLDEFSMSA 527 (575)
T ss_dssp HHTTCCEEEECG
T ss_pred HHCCCCEEEECc
Confidence 788999977763
No 24
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.88 E-value=3.6e-09 Score=116.09 Aligned_cols=132 Identities=11% Similarity=0.034 Sum_probs=104.6
Q ss_pred CCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHH-------HcCC--CCCceEEEeecChHhHhhHHHHHHhCC
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLS-------KLGD--LSQTQIFAKIENIEGLTHFDEILQAAD 274 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~-------~~~~--~~~~~IiaKIEt~~av~nldeI~~~sD 274 (527)
+..-+.+.|. .+.+.|...|++|||+|+++++++++++. +.|. ++++.+.++||++.|+.++|+|++..|
T Consensus 371 if~~QlrAi~-rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vD 449 (572)
T 2wqd_A 371 IFRPQLRALL-RASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVD 449 (572)
T ss_dssp HHHHHHHHHH-HHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCS
T ss_pred HHHHHHHHHH-HHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCC
Confidence 3444567775 56889999999999999999999888763 2231 136899999999999999999999999
Q ss_pred EEEEeCCCCcCC-CC---------------chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH
Q 036921 275 GIILSRGNLGID-LP---------------PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 275 gImIaRgDLg~e-~~---------------~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav 337 (527)
++.||..||+.- ++ -+.|..+.++++.+|+++|||+.+ .++ - ..|.-+ ...+
T Consensus 450 f~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~----a--gdp~~~-----~~l~ 518 (572)
T 2wqd_A 450 FFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEM----A--GDETAI-----PLLL 518 (572)
T ss_dssp EEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG----G--GCTTTH-----HHHH
T ss_pred EEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCc----c--CCHHHH-----HHHH
Confidence 999999999821 11 146888999999999999999998 653 2 244333 5677
Q ss_pred HhCCcEEEeC
Q 036921 338 LDGSDAILLG 347 (527)
Q Consensus 338 ~~g~D~imLs 347 (527)
..|.|.+..+
T Consensus 519 ~lG~~~~S~~ 528 (572)
T 2wqd_A 519 GLGLDEFSMS 528 (572)
T ss_dssp HHTCCEEEEC
T ss_pred HCCCCEEEec
Confidence 8899999877
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.81 E-value=9.6e-09 Score=108.15 Aligned_cols=134 Identities=11% Similarity=0.005 Sum_probs=103.9
Q ss_pred CHh-hHHHHHhhccc------ccccEEEecCCCCHHHHHHHHHHHHH----cCCC-CCceEEEeecChHh---HhhHHHH
Q 036921 205 SDK-DKEVISSWGVQ------NKIDFLSLSYTRHAEDVRQAREYLSK----LGDL-SQTQIFAKIENIEG---LTHFDEI 269 (527)
Q Consensus 205 t~~-D~~di~~~~~~------~g~d~I~~sfV~s~~dv~~lr~~l~~----~~~~-~~~~IiaKIEt~~a---v~nldeI 269 (527)
|++ ...||. ..+. .++|+|++|+|++++|+..+..+|.. .|.. ..+.++++|||++| +.|+++|
T Consensus 94 T~~~~~~DL~-al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eI 172 (433)
T 3oyz_A 94 TRYQGFQHML-DITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDE 172 (433)
T ss_dssp HHHHHHHHHH-HHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHH
T ss_pred ChhccHHHHH-HHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHH
Confidence 455 677785 4555 78999999999999999999888753 2321 26889999999999 9999999
Q ss_pred HHhC-------CEEEEeCCCCcCCCCch-------hHHHHHHHHHHHHHHcCCcEEE--ecchhhhhcCCCCChHh-hhh
Q 036921 270 LQAA-------DGIILSRGNLGIDLPPE-------KVFLFQKAALYKCNMAGKPAVV--TRVVDSMTDNLRPTRAE-ATD 332 (527)
Q Consensus 270 ~~~s-------DgImIaRgDLg~e~~~~-------~v~~~qk~Ii~~c~~~gKpvi~--Tq~LeSM~~~p~PtraE-v~D 332 (527)
+.++ +|+++|+.||+.+++.. .+..+..+++.+|+++|+++|. +.-+. ..+- ..+
T Consensus 173 Aaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDgV~~di~--------D~egL~~e 244 (433)
T 3oyz_A 173 MGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGPYDDIR--------DVEGYRER 244 (433)
T ss_dssp HHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEECCCCCTT--------CHHHHHHH
T ss_pred HhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccccccCCC--------CHHHHHHH
Confidence 9874 69999999999888763 4778889999999999999876 32221 1111 146
Q ss_pred HHHHHHhCCcEEEeC
Q 036921 333 VANAVLDGSDAILLG 347 (527)
Q Consensus 333 v~nav~~g~D~imLs 347 (527)
...+...|++|-+.=
T Consensus 245 a~~ar~lGF~GK~~I 259 (433)
T 3oyz_A 245 MTDNQAKGMLGIWSL 259 (433)
T ss_dssp HHHHHTTTCCEEEEC
T ss_pred HHHHHhCCCCceEec
Confidence 677888999987663
No 26
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=98.30 E-value=9.5e-06 Score=87.82 Aligned_cols=255 Identities=15% Similarity=0.112 Sum_probs=151.0
Q ss_pred cccCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCCCe
Q 036921 18 LEPSKASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPE 97 (527)
Q Consensus 18 ~~~~~~~~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gpk 97 (527)
..|.|+....||+-|. ||.+. +++.+-+.+|++++=++|--+....|+.+++--..+.+.+...+.
T Consensus 79 va~~p~~l~~rRs~L~---~P~~r--km~~kAl~sgAD~vi~DlEDaVap~~k~~~~ar~~l~~al~~~~~--------- 144 (532)
T 3cuz_A 79 IRGIPADLEDRRVEIT---GPVER--KMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTIS--------- 144 (532)
T ss_dssp CSCCCGGGSCCSEEEE---EECCH--HHHHHHHTSSSSEEEEESSTTCCCCHHHHHHHHHHHHHHHTTCCE---------
T ss_pred cCCCChhhhhceeEEE---ccCCH--HHHHHHHhcCCCEEEEcCccCCCccccchHHHHHHHHHHHhccCc---------
Confidence 4577777788888885 68765 899999999999999999999987777655433333332221110
Q ss_pred EEeeeCCCCcEEeecCCEEEEeeCCCCCCCCcEEeeccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEeeCCeEEE
Q 036921 98 LQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTC 177 (527)
Q Consensus 98 iR~~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~~~v~~ 177 (527)
+.=..|..+.|..+. ..+.| -+-++ +.-...|
T Consensus 145 ----------~~~~~G~~~~l~~~~------~~l~v-----------------R~~g~-~~~e~~V-------------- 176 (532)
T 3cuz_A 145 ----------YTNEAGKIYQLKPNP------AVLIC-----------------RVRGL-HLPEKHV-------------- 176 (532)
T ss_dssp ----------EECTTSCEEECCSSC------CEEEE-----------------ECCCT-TCEEEEE--------------
T ss_pred ----------ccCCCCceeeccCCc------ceeee-----------------ecCCC-CCCeeEE--------------
Confidence 000122222221100 01111 00000 1001011
Q ss_pred EEEeCcEecCCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHH----cCCC-CCce
Q 036921 178 VIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSK----LGDL-SQTQ 252 (527)
Q Consensus 178 ~v~~~G~l~~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~----~~~~-~~~~ 252 (527)
. .| |...|+.-++.--...+|.+.+.. ...| ++|.+|++++++|++.+.+++.. .|.. ..++
T Consensus 177 R-iN---------g~~~p~~l~D~~l~~~~Dl~~l~~--~g~g-~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtik 243 (532)
T 3cuz_A 177 T-WR---------GEAIPGSLFDFALYFFHNYQALLA--KGSG-PYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIK 243 (532)
T ss_dssp E-ET---------TEEEEHHHHHHHHHHHHHHHHHHH--TTCC-CEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSE
T ss_pred E-EC---------CCcCchHHHHHHHHHHHHHHHHHc--CCCC-CeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceE
Confidence 0 01 122233323321123344444421 1234 99999999999999999887752 2321 3588
Q ss_pred EEEeecChHhHhhHHHHHHh-CC---EEEEeCCCCcCCCCch--------------------hHHHHHHHHH-HHHHHcC
Q 036921 253 IFAKIENIEGLTHFDEILQA-AD---GIILSRGNLGIDLPPE--------------------KVFLFQKAAL-YKCNMAG 307 (527)
Q Consensus 253 IiaKIEt~~av~nldeI~~~-sD---gImIaRgDLg~e~~~~--------------------~v~~~qk~Ii-~~c~~~g 307 (527)
+.+.|||..|+.|++||+.+ ++ |+..|+.|+..++ +. .+..+..+++ .+|+++|
T Consensus 244 i~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~-i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G 322 (532)
T 3cuz_A 244 ATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSY-IKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRG 322 (532)
T ss_dssp EEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHH-HHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHH-HhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999986 44 9999999988766 21 2445555554 9999999
Q ss_pred CcEEE--ecchhhhhcCCCCCh--H----hhhhHHHHHHhCCcEEEeCCccccCCChHHH
Q 036921 308 KPAVV--TRVVDSMTDNLRPTR--A----EATDVANAVLDGSDAILLGAETLRGLYPVET 359 (527)
Q Consensus 308 Kpvi~--Tq~LeSM~~~p~Ptr--a----Ev~Dv~nav~~g~D~imLs~Eta~G~yP~e~ 359 (527)
++.|. +-++.. ..|.. + =..|...+..+|+||-+.- +|-++
T Consensus 323 ~~aIdGm~a~~p~----kD~e~~~~~~~~l~~dk~~~~~~GfdGkwvi-------HP~qv 371 (532)
T 3cuz_A 323 AFAMGGMAAFIPS----KDEEHNNQVLNKVKADKSLEANNGHDGTWIA-------HPGLA 371 (532)
T ss_dssp CEEEEEEECBCCC----SSGGGCHHHHHHHHHHHHHHHHHTCSEEEES-------SGGGH
T ss_pred CCCccCccccCCC----CChhHHHHHHHHHHHHHHHHHHCCCCccccC-------CHHHH
Confidence 99876 332210 01111 1 1245666888999998885 67555
No 27
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.29 E-value=1.1e-06 Score=100.74 Aligned_cols=137 Identities=15% Similarity=0.102 Sum_probs=101.2
Q ss_pred CCCCHhhHHHHHhhcc---ccccc---EEEecCCCCHHHHHHHHHHHHH--------cCCCCCceEEEeecChHhHhhHH
Q 036921 202 PTLSDKDKEVISSWGV---QNKID---FLSLSYTRHAEDVRQAREYLSK--------LGDLSQTQIFAKIENIEGLTHFD 267 (527)
Q Consensus 202 p~lt~~D~~di~~~~~---~~g~d---~I~~sfV~s~~dv~~lr~~l~~--------~~~~~~~~IiaKIEt~~av~nld 267 (527)
|.+.+-..+.|...+. +.|.+ .|++|||+++++++.+++++.. .|...++.+.++||++.|+.+++
T Consensus 680 peif~~QlrAi~~Aa~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~ad 759 (876)
T 1vbg_A 680 PELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVAD 759 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHH
Confidence 3444445555542212 22654 6999999999999999987642 24224688999999999999999
Q ss_pred HHHHhCCEEEEeCCCCc-CCCCc----------------------------hhHHHHHHHHHHHHHHc--CCcEEE-ecc
Q 036921 268 EILQAADGIILSRGNLG-IDLPP----------------------------EKVFLFQKAALYKCNMA--GKPAVV-TRV 315 (527)
Q Consensus 268 eI~~~sDgImIaRgDLg-~e~~~----------------------------~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~ 315 (527)
+|++..|++.||..||. ..++. +.|..+.+.++++|+++ |||+.+ .++
T Consensus 760 eIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~ 839 (876)
T 1vbg_A 760 EIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEH 839 (876)
T ss_dssp HHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGG
T ss_pred HHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCc
Confidence 99999999999999998 33332 35777888999999998 999999 763
Q ss_pred hhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCc
Q 036921 316 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAE 349 (527)
Q Consensus 316 LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~E 349 (527)
+. +-.-+...+..|.|-+-+|..
T Consensus 840 ---------~g--dP~~~~~l~~~Gl~~vS~sp~ 862 (876)
T 1vbg_A 840 ---------GG--EPSSVAFFAKAGLDYVSCSPF 862 (876)
T ss_dssp ---------GG--SHHHHHHHHHTTCSEEEECGG
T ss_pred ---------CC--CHHHHHHHHHcCCCEEEECcc
Confidence 22 222335577889999988843
No 28
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.17 E-value=2.8e-06 Score=97.32 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=100.9
Q ss_pred CCCCHhhHHHHHhhccc---c-ccc---EEEecCCCCHHHHHHHHHHHHH--------cCCCCCceEEEeecChHhHhhH
Q 036921 202 PTLSDKDKEVISSWGVQ---N-KID---FLSLSYTRHAEDVRQAREYLSK--------LGDLSQTQIFAKIENIEGLTHF 266 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~---~-g~d---~I~~sfV~s~~dv~~lr~~l~~--------~~~~~~~~IiaKIEt~~av~nl 266 (527)
|.+.+-..+.|...+.. . |.+ .|++|||+++++++.+++++.+ .|...++.|.++||++.|+.++
T Consensus 673 peif~~QlrAi~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~a 752 (873)
T 1kbl_A 673 PEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTA 752 (873)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHH
Confidence 44445555555422222 1 754 7999999999999999987642 2422468899999999999999
Q ss_pred HHHHHhCCEEEEeCCCCc-CCCCc----------------------------hhHHHHHHHHHHHHHHc--CCcEEE-ec
Q 036921 267 DEILQAADGIILSRGNLG-IDLPP----------------------------EKVFLFQKAALYKCNMA--GKPAVV-TR 314 (527)
Q Consensus 267 deI~~~sDgImIaRgDLg-~e~~~----------------------------~~v~~~qk~Ii~~c~~~--gKpvi~-Tq 314 (527)
++|++..|++.||..||. ..++. +.|..+.+.++++|+++ |+|+.+ .+
T Consensus 753 d~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe 832 (873)
T 1kbl_A 753 DAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGE 832 (873)
T ss_dssp HHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSG
T ss_pred HHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCC
Confidence 999999999999999998 44333 34666778999999998 899999 77
Q ss_pred chhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 315 VVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 315 ~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
+ +. +-.-+...+..|.|-+-+|.
T Consensus 833 ~---------~g--dP~~~~~l~~~Gl~~vS~sp 855 (873)
T 1kbl_A 833 H---------GG--DPSSVEFCHKVGLNYVSCSP 855 (873)
T ss_dssp G---------GG--SHHHHHHHHHTTCSEEEECG
T ss_pred C---------CC--CHHHHHHHHHcCCCEEEECh
Confidence 3 22 22223556788999998873
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.69 E-value=0.00018 Score=77.90 Aligned_cols=123 Identities=16% Similarity=0.197 Sum_probs=89.6
Q ss_pred cccccEEEecCCCCHHHHHHHHHHHHHc----CCC-CCceEEEeecChHhHhhHHHHHHh-C---CEEEEeCCCCcCCCC
Q 036921 218 QNKIDFLSLSYTRHAEDVRQAREYLSKL----GDL-SQTQIFAKIENIEGLTHFDEILQA-A---DGIILSRGNLGIDLP 288 (527)
Q Consensus 218 ~~g~d~I~~sfV~s~~dv~~lr~~l~~~----~~~-~~~~IiaKIEt~~av~nldeI~~~-s---DgImIaRgDLg~e~~ 288 (527)
..|+ +|.+|++++++|++.+.+++... |.. ..+++.+.|||..|+-|++||+.. + -|+..||.|+..++.
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 4676 99999999999999998877532 321 368999999999999999999976 3 499999999876553
Q ss_pred c--------------------hhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCCh-----------HhhhhHHHHH
Q 036921 289 P--------------------EKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTR-----------AEATDVANAV 337 (527)
Q Consensus 289 ~--------------------~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~Ptr-----------aEv~Dv~nav 337 (527)
. +-+...++.++.+|+++|++.|. .|- .+ .|.+ .=..|-....
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIg-Gm~-a~----ip~~~D~~~n~~~~~~~~~dk~~~~ 354 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIG-GMA-AQ----IPIKNNPEANEAAFEKVRADKEREA 354 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC-------------------------CHHHHHHHHHH
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCcc-ccc-cc----CcCcCChHHHHHHHHHHHHHHHHHH
Confidence 1 12455667788999999999875 111 12 2322 1125556688
Q ss_pred HhCCcEEEeC
Q 036921 338 LDGSDAILLG 347 (527)
Q Consensus 338 ~~g~D~imLs 347 (527)
.+|+||-+.-
T Consensus 355 ~~GfdGkwvi 364 (528)
T 3cux_A 355 LDGHDGTWVA 364 (528)
T ss_dssp HHTCSBEEES
T ss_pred hCCCCccccc
Confidence 8999998886
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.58 E-value=8.2e-05 Score=82.11 Aligned_cols=135 Identities=9% Similarity=0.025 Sum_probs=93.9
Q ss_pred hHHHHHhhccc--ccccEEEecCCCCHHHHHHHHHHHHH----cCCC-CCceEEEeecChHhHhhHHHHHH-hC---CEE
Q 036921 208 DKEVISSWGVQ--NKIDFLSLSYTRHAEDVRQAREYLSK----LGDL-SQTQIFAKIENIEGLTHFDEILQ-AA---DGI 276 (527)
Q Consensus 208 D~~di~~~~~~--~g~d~I~~sfV~s~~dv~~lr~~l~~----~~~~-~~~~IiaKIEt~~av~nldeI~~-~s---DgI 276 (527)
-..|++ ..+. .|.++|.+|++++++|+..+.+++.. .|.+ ..+++.+.|||+.|+-|++||+. ++ -|+
T Consensus 371 ~~hDl~-al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gL 449 (731)
T 1p7t_A 371 ALYDLK-VQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFI 449 (731)
T ss_dssp HHHHHH-HCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEE
T ss_pred HHhhHH-HHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEE
Confidence 456664 3343 35899999999999999999888752 2321 36899999999999999999985 33 499
Q ss_pred EEeCCCCcCCC-Cc----------------hhHHHHHHHHHH---HHHHcCCcEEEecchhhhhcCCCCChHhhhhHHHH
Q 036921 277 ILSRGNLGIDL-PP----------------EKVFLFQKAALY---KCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANA 336 (527)
Q Consensus 277 mIaRgDLg~e~-~~----------------~~v~~~qk~Ii~---~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~na 336 (527)
..|+.|+..++ .. +-+...++..+. +|+++|++.|.-.| -..|.-...=..|-...
T Consensus 450 n~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgkGm----~a~p~dmeg~~~dk~~~ 525 (731)
T 1p7t_A 450 NTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGM----WAMPDLMADMYSQKGDQ 525 (731)
T ss_dssp EECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEECC----CCCTTCHHHHHHHTHHH
T ss_pred EcCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccccc----ccChhhHHHHHHHHHHH
Confidence 99999987774 21 112234455555 89999999885122 22222212222555667
Q ss_pred HHhCCcEEEeC
Q 036921 337 VLDGSDAILLG 347 (527)
Q Consensus 337 v~~g~D~imLs 347 (527)
...|+||-++-
T Consensus 526 ~~~GfdGkwVi 536 (731)
T 1p7t_A 526 LRAGANTAWVP 536 (731)
T ss_dssp HHTTCSEEEES
T ss_pred HhCCCCCcccC
Confidence 88999998886
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.30 E-value=0.0016 Score=74.72 Aligned_cols=139 Identities=15% Similarity=0.058 Sum_probs=103.0
Q ss_pred ccCCCCCHhhHHHHHhhcc---ccccc---EEEecCCCCHHHHHHHHHHHH--------HcCCCCCceEEEeecChHhHh
Q 036921 199 IELPTLSDKDKEVISSWGV---QNKID---FLSLSYTRHAEDVRQAREYLS--------KLGDLSQTQIFAKIENIEGLT 264 (527)
Q Consensus 199 ~~lp~lt~~D~~di~~~~~---~~g~d---~I~~sfV~s~~dv~~lr~~l~--------~~~~~~~~~IiaKIEt~~av~ 264 (527)
+..|.+.+-..+.|.+.+. +.|.+ .|++|||++.++++.+++.+. +.|...++++-.+||++.|.-
T Consensus 697 l~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal 776 (913)
T 1h6z_A 697 ITYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAV 776 (913)
T ss_dssp HHSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHH
Confidence 3456666666777753322 23644 799999999999999998753 335334688999999999999
Q ss_pred hHHHHHHhCCEEEEeCCCCcCCC-Cc----------------------------hhHHHHHHHHHHHHHH--cCCcEEE-
Q 036921 265 HFDEILQAADGIILSRGNLGIDL-PP----------------------------EKVFLFQKAALYKCNM--AGKPAVV- 312 (527)
Q Consensus 265 nldeI~~~sDgImIaRgDLg~e~-~~----------------------------~~v~~~qk~Ii~~c~~--~gKpvi~- 312 (527)
.+|+|++.+|++=||-.||.--+ ++ +.|..+.+.++++|++ .|+||.+
T Consensus 777 ~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgIC 856 (913)
T 1h6z_A 777 TADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGIC 856 (913)
T ss_dssp THHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 99999999999999999975211 11 3566778889999997 6999999
Q ss_pred ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 313 TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 313 Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
.|+ |... .-+...+..|.|-+-+|.
T Consensus 857 GE~---------~gdP--~~~~~l~~~Gid~vS~sp 881 (913)
T 1h6z_A 857 GEH---------GGDP--ATIGFCHKVGLDYVSCSP 881 (913)
T ss_dssp SGG---------GGCH--HHHHHHHHHTCSEEEECG
T ss_pred CCC---------CCCH--HHHHHHHHcCCCEEEECc
Confidence 774 2222 223556778999999983
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=95.93 E-value=0.055 Score=62.52 Aligned_cols=115 Identities=17% Similarity=0.083 Sum_probs=84.4
Q ss_pred EEEecCCCCHHHHHHHHHHHH--------HcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCc-----CCC--
Q 036921 223 FLSLSYTRHAEDVRQAREYLS--------KLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLG-----IDL-- 287 (527)
Q Consensus 223 ~I~~sfV~s~~dv~~lr~~l~--------~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg-----~e~-- 287 (527)
.|++|||++.++++.+++.+. +.|...+++|-.+||.+.+.-.+|+|++.+|++=||-.||. ++=
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 599999999999998886542 33432467899999999999999999999999999999974 221
Q ss_pred -----------------Cc-----hhHHHHHHHHHHHHHHcC--CcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCc
Q 036921 288 -----------------PP-----EKVFLFQKAALYKCNMAG--KPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSD 342 (527)
Q Consensus 288 -----------------~~-----~~v~~~qk~Ii~~c~~~g--Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D 342 (527)
|+ +-|..+.+..+++||+++ +||.+ .|+ |... .-+...+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~---------~gdP--~~~~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEH---------GGDP--ATIGFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGG---------GGCH--HHHHHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCc---------ccCH--HHHHHHHHcCCC
Confidence 00 134455566666666665 58888 774 3322 223567788999
Q ss_pred EEEeCC
Q 036921 343 AILLGA 348 (527)
Q Consensus 343 ~imLs~ 348 (527)
-+-+|.
T Consensus 876 ~~S~sP 881 (913)
T 2x0s_A 876 YVSCSP 881 (913)
T ss_dssp EEEECG
T ss_pred EEEECh
Confidence 999983
No 33
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=95.14 E-value=0.07 Score=61.52 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=91.9
Q ss_pred cccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhC-------------CEEEEeCCCCcCC
Q 036921 220 KIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAA-------------DGIILSRGNLGID 286 (527)
Q Consensus 220 g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~s-------------DgImIaRgDLg~e 286 (527)
.+..+++||.++++||.++--+.++.|....+.|+.-.||.+.++|.++|++.- =-||+|..|=+-+
T Consensus 528 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD 607 (970)
T 1jqo_A 528 SFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKD 607 (970)
T ss_dssp TEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHH
T ss_pred hhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeccccccc
Confidence 366789999999999999999999888545689999999999999999999852 1699999999988
Q ss_pred CCc----hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCCh
Q 036921 287 LPP----EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTR 327 (527)
Q Consensus 287 ~~~----~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~Ptr 327 (527)
-|. -.+..+|+++.+.|+++|+++.. -..=.|.=.-.-|+.
T Consensus 608 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 608 AGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 887 48889999999999999999887 555556666666654
No 34
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.91 E-value=0.43 Score=51.67 Aligned_cols=125 Identities=15% Similarity=0.207 Sum_probs=84.4
Q ss_pred CCHhhHHHHHhhcccccccEEEec--CCCCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCCEEEEeC
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLS--YTRHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAADGIILSR 280 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~s--fV~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sDgImIaR 280 (527)
.++.+.+.+. ..++.|+|+|++- .-.+...++ ..+.+++.. .++.||| -+-|.++.++|-+ .-+|+|-||-
T Consensus 278 v~~d~~eR~~-aLv~AGvD~iviD~ahGhs~~v~~-~i~~ik~~~--p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGi 351 (556)
T 4af0_A 278 TRPGDKDRLK-LLAEAGLDVVVLDSSQGNSVYQIE-FIKWIKQTY--PKIDVIAGNVVTREQAAQLIA--AGADGLRIGM 351 (556)
T ss_dssp SSHHHHHHHH-HHHHTTCCEEEECCSCCCSHHHHH-HHHHHHHHC--TTSEEEEEEECSHHHHHHHHH--HTCSEEEECS
T ss_pred cCccHHHHHH-HHHhcCCcEEEEeccccccHHHHH-HHHHHHhhC--CcceEEeccccCHHHHHHHHH--cCCCEEeecC
Confidence 3566677775 5689999998863 334444444 444455554 4566555 8999999877643 4579999976
Q ss_pred CCCcC-------CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 281 GNLGI-------DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 281 gDLg~-------e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
|-=++ -++.+. ..+...+.+.|+++|+|+|- ..+ ---.|++.|+..|||+|||.
T Consensus 352 GpGSiCtTr~v~GvG~PQ-~tAi~~~a~~a~~~~vpvIADGGI------------~~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 352 GSGSICITQEVMAVGRPQ-GTAVYAVAEFASRFGIPCIADGGI------------GNIGHIAKALALGASAVMMG 413 (556)
T ss_dssp SCSTTBCCTTTCCSCCCH-HHHHHHHHHHHGGGTCCEEEESCC------------CSHHHHHHHHHTTCSEEEES
T ss_pred CCCcccccccccCCCCcH-HHHHHHHHHHHHHcCCCEEecCCc------------CcchHHHHHhhcCCCEEEEc
Confidence 65222 122233 33445667888999999997 553 13589999999999999995
No 35
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=94.68 E-value=0.048 Score=58.76 Aligned_cols=108 Identities=12% Similarity=0.145 Sum_probs=83.1
Q ss_pred ccccEEEecCCCCHHHHHHHHHHHHH--------cCC---CCCceEEEeecChHhHhhHHHHHHh----------C---C
Q 036921 219 NKIDFLSLSYTRHAEDVRQAREYLSK--------LGD---LSQTQIFAKIENIEGLTHFDEILQA----------A---D 274 (527)
Q Consensus 219 ~g~d~I~~sfV~s~~dv~~lr~~l~~--------~~~---~~~~~IiaKIEt~~av~nldeI~~~----------s---D 274 (527)
..+-.+++||.+|++|+.++..++++ .|. ...+.|+.-+||.+.+.|.++|++. . =
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45678999999999999999777632 121 1367899999999999999999875 1 2
Q ss_pred EEEEeCCCCcCCCCc----hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCC
Q 036921 275 GIILSRGNLGIDLPP----EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPT 326 (527)
Q Consensus 275 gImIaRgDLg~e~~~----~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~Pt 326 (527)
-||+|+.|=+.+-|+ -.+..+|.++.+.|+++|.++-. -..=-+-=.-.-|+
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lFHGRGGtvgRGGgp~ 274 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSE 274 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCSSGGGTCCCT
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeeCCCCCcCCCCCH
Confidence 799999998888887 47889999999999999999765 33223333344454
No 36
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=94.19 E-value=0.058 Score=61.75 Aligned_cols=152 Identities=16% Similarity=0.157 Sum_probs=108.5
Q ss_pred ccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhC-------------CEEEEeCCCCcC
Q 036921 219 NKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAA-------------DGIILSRGNLGI 285 (527)
Q Consensus 219 ~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~s-------------DgImIaRgDLg~ 285 (527)
..+..+++||.++++||.++--+.++.|....+.|+.-.||.+.++|.++|++.- =-||+|..|=+-
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 4577899999999999999999998888544689999999999999999999852 179999999888
Q ss_pred CCCc----hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCC--ChHH
Q 036921 286 DLPP----EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGL--YPVE 358 (527)
Q Consensus 286 e~~~----~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~--yP~e 358 (527)
+-|. -.+..+|+++.+.|+++|+++.. -..=.|+=...-|+..-+-.-.....+|.=-+--.||+-.-+ +|..
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv~g~~r~TeQGEvI~~kY~~p~~ 626 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEI 626 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTTTTCEEEEECGGGHHHHHSSHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCcCCceEEEecchHHHHhcCChHH
Confidence 8877 48889999999999999999887 444444444444533211100001112333455566543333 4777
Q ss_pred HHHHHHHHHHHH
Q 036921 359 TISIVGKICAEA 370 (527)
Q Consensus 359 ~V~~~~~i~~~a 370 (527)
|+..+..++..+
T Consensus 627 a~~nLe~~~~A~ 638 (883)
T 1jqn_A 627 TVSSLSLYTGAI 638 (883)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777666655443
No 37
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.59 E-value=0.4 Score=44.83 Aligned_cols=134 Identities=11% Similarity=0.131 Sum_probs=84.2
Q ss_pred HHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecCh-HhHhhHHHHHHh-CCEEEEeCCCCcCCCCc
Q 036921 212 ISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENI-EGLTHFDEILQA-ADGIILSRGNLGIDLPP 289 (527)
Q Consensus 212 i~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~-~av~nldeI~~~-sDgImIaRgDLg~e~~~ 289 (527)
++ .+.+.|+|+|.++-.-..+++.++.+.+.+.| ..++.-+-++ ..++.+..+.+. .|.|.+.+|-=|...+.
T Consensus 70 ~~-~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~ 144 (211)
T 3f4w_A 70 SQ-LLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG----KQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGR 144 (211)
T ss_dssp HH-HHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT----CEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTC
T ss_pred HH-HHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC----CeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCC
Confidence 54 45899999999987666678888888888776 3444322111 234557777777 69988876522211221
Q ss_pred hhHHHHHHHHHHHHHH-c-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHH
Q 036921 290 EKVFLFQKAALYKCNM-A-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKI 366 (527)
Q Consensus 290 ~~v~~~qk~Ii~~c~~-~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i 366 (527)
..+ + .++..++ . +.|+++ ..+ .| .++..+...|+|++....--..+..|.++++.+.+.
T Consensus 145 ~~~----~-~i~~l~~~~~~~~i~~~gGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~ 206 (211)
T 3f4w_A 145 KPI----D-DLITMLKVRRKARIAVAGGI--------SS-----QTVKDYALLGPDVVIVGSAITHAADPAGEARKISQV 206 (211)
T ss_dssp CSH----H-HHHHHHHHCSSCEEEEESSC--------CT-----TTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHH
T ss_pred CCH----H-HHHHHHHHcCCCcEEEECCC--------CH-----HHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHH
Confidence 111 1 1222222 2 678877 542 12 356777788999999986555677899988887776
Q ss_pred HH
Q 036921 367 CA 368 (527)
Q Consensus 367 ~~ 368 (527)
++
T Consensus 207 ~~ 208 (211)
T 3f4w_A 207 LL 208 (211)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 38
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=93.22 E-value=2.6 Score=39.59 Aligned_cols=119 Identities=16% Similarity=0.069 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEec
Q 036921 393 HLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLA 472 (527)
Q Consensus 393 ~~~~ia~~av~~a~~~~a~~Ivv~T~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~ 472 (527)
-++.....|++.|.+++.+-|||+|.+|.||+.+...-...-+++||.+.--...-.|.. ++.+.+.| --.|+.-+-.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~-~~e~~~~L-~~~G~~V~t~ 104 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTM-PPEVEEEL-RKRGAKIVRQ 104 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSS-CHHHHHHH-HHTTCEEEEC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcC-CHHHHHHH-HhCCCEEEEE
Confidence 467888899999999999999999999999999999877788999875322222223432 34444443 2334332222
Q ss_pred CCCCC-CC-----CCc-cCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEEec
Q 036921 473 DPRHP-AE-----STN-ATNESVLKVALD---------------HGKASGVIKSHDRVVVCQKV 514 (527)
Q Consensus 473 ~~~~~-~~-----~~~-~~~e~~i~~a~~---------------~a~e~g~v~~GD~VVvv~g~ 514 (527)
..... .+ .|- -..-+++..++. .|...|++.. +.||.+.|.
T Consensus 105 tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 105 SHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp CCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred eccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 11100 00 000 012233333333 4568899999 999999987
No 39
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=92.73 E-value=2 Score=44.28 Aligned_cols=120 Identities=18% Similarity=0.238 Sum_probs=74.4
Q ss_pred hHHHHHhhcccccccEEEe--cCCCCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCCEEEEeCCCCc
Q 036921 208 DKEVISSWGVQNKIDFLSL--SYTRHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAADGIILSRGNLG 284 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~--sfV~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sDgImIaRgDLg 284 (527)
+.+.+. .+++.|+|+|.+ ++-.+...++.++.+- +.. .++.+++ .+-|.+....+.+ .=+|+|.+|-|. |
T Consensus 109 ~~~~~~-~lieaGvd~I~idta~G~~~~~~~~I~~ik-~~~--p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gp-G 181 (366)
T 4fo4_A 109 NEERVK-ALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAY--PHLEIIGGNVATAEGARALIE--AGVSAVKVGIGP-G 181 (366)
T ss_dssp CHHHHH-HHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHC--TTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSC-S
T ss_pred HHHHHH-HHHhCCCCEEEEeCCCCCCHHHHHHHHHHH-Hhc--CCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCC-C
Confidence 345554 568999999987 5555655444454433 332 3567666 5877776655433 247999995221 1
Q ss_pred CC--------CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 285 ID--------LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 285 ~e--------~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.. .+.+.+ .+-..+.+.|+..++|+|. ..+ ....|++.++..|+|++|+.
T Consensus 182 s~~~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPVIA~GGI------------~~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 182 SICTTRIVTGVGVPQI-TAIADAAGVANEYGIPVIADGGI------------RFSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp TTBCHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEESCC------------CSHHHHHHHHHTTCSEEEES
T ss_pred CCCCcccccCcccchH-HHHHHHHHHHhhcCCeEEEeCCC------------CCHHHHHHHHHcCCCEEEEC
Confidence 11 112222 2334466667778999997 553 13467899999999999996
No 40
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=92.62 E-value=2 Score=43.64 Aligned_cols=159 Identities=15% Similarity=0.153 Sum_probs=103.0
Q ss_pred CCCHhhHHHHHh-hcccccccEEEe-cCCCCHHHHHHHHHHHHH-----cCCCCCceEEEeecChHhHhhHHHHHHh-CC
Q 036921 203 TLSDKDKEVISS-WGVQNKIDFLSL-SYTRHAEDVRQAREYLSK-----LGDLSQTQIFAKIENIEGLTHFDEILQA-AD 274 (527)
Q Consensus 203 ~lt~~D~~di~~-~~~~~g~d~I~~-sfV~s~~dv~~lr~~l~~-----~~~~~~~~IiaKIEt~~av~nldeI~~~-sD 274 (527)
.++..|+..|.+ ...+.|+|.|=+ +|+.++++.+.++++... .- ++..+.+-.=+.. .++..++. .|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~i~~l~~~~~---~i~~a~~~g~~ 111 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLT--ERIEILGFVDGNK---TVDWIKDSGAK 111 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCG--GGEEEEEESSTTH---HHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccC--CCCeEEEEccchh---hHHHHHHCCCC
Confidence 367777777765 556689999988 677788666666654432 11 4566777765555 45555544 36
Q ss_pred E--EEEeCCCC----cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEe
Q 036921 275 G--IILSRGNL----GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILL 346 (527)
Q Consensus 275 g--ImIaRgDL----g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imL 346 (527)
. ++++-.|+ -.....++.....+.+++.|+++|+.+.+ ... +-..++-+...+.+++. +...|+|.|.|
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 188 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFL 188 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4 44444443 12345567777888999999999999887 332 10011223445556655 45669999999
Q ss_pred CCccccCCChHHHHHHHHHHHHHH
Q 036921 347 GAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 347 s~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
. +|.=.-.|.++-++++.+.++.
T Consensus 189 ~-DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 189 P-DTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp E-CTTCCCCHHHHHHHHHHHHHHC
T ss_pred e-cCCCCcCHHHHHHHHHHHHHhc
Confidence 7 6766678999988888877653
No 41
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.54 E-value=1.7 Score=43.02 Aligned_cols=155 Identities=13% Similarity=0.080 Sum_probs=95.9
Q ss_pred CCHhhHHHHHhhcccccccEEEecCCCCHH------HHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEE
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSYTRHAE------DVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGI 276 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sfV~s~~------dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgI 276 (527)
++..++..|.+...+.|++.|-+.+-.+++ |..++.+.+.+. .++++.+.+-+. +.++..++. .|.|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~---~~~~v~~l~~n~---~~i~~a~~~G~~~V 96 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA---DGVRYSVLVPNM---KGYEAAAAAHADEI 96 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC---SSSEEEEECSSH---HHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC---CCCEEEEEeCCH---HHHHHHHHCCCCEE
Confidence 566777776666678999998885433333 333443334322 356776666443 333444433 4888
Q ss_pred EEeCCCCcC---------CCCchhHHHHHHHHHHHHHHcCCcEEE--ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEE
Q 036921 277 ILSRGNLGI---------DLPPEKVFLFQKAALYKCNMAGKPAVV--TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAI 344 (527)
Q Consensus 277 mIaRgDLg~---------e~~~~~v~~~qk~Ii~~c~~~gKpvi~--Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~i 344 (527)
+|. ++. ..+.++....-+++++.|+++|++|-. ...+ +.....+-+..++.+++. +...|+|.+
T Consensus 97 ~i~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~-~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 97 AVF---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV-ECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp EEE---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS-EETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred EEE---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe-cCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 873 222 367788888889999999999999862 1111 000111234556666665 456799999
Q ss_pred EeCCccccCCChHHHHHHHHHHHHH
Q 036921 345 LLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 345 mLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
.|. +|.=...|.+.-+.++.+.+.
T Consensus 173 ~l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 173 SLG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EEE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred Eec-CCCCCcCHHHHHHHHHHHHHh
Confidence 998 454445798888888877643
No 42
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.65 E-value=2 Score=46.31 Aligned_cols=126 Identities=16% Similarity=0.193 Sum_probs=76.4
Q ss_pred CHhhHHHHHhhcccccccEEEecCCC-CHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCCEEEEeCCC
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTR-HAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAADGIILSRGN 282 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~-s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sDgImIaRgD 282 (527)
++.+.+.+. ..++.|+|.|.+.... ..+.+.++.+.+.+.- .+..|++ -+-|.+....+.+ .-+|+|.+|-|-
T Consensus 254 ~~d~~era~-aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~--~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~ 328 (511)
T 3usb_A 254 TADAMTRID-ALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKY--PSLNIIAGNVATAEATKALIE--AGANVVKVGIGP 328 (511)
T ss_dssp STTHHHHHH-HHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSC
T ss_pred ccchHHHHH-HHHhhccceEEecccccchhhhhhHHHHHHHhC--CCceEEeeeeccHHHHHHHHH--hCCCEEEECCCC
Confidence 334456664 5689999999985443 2233333333343332 3455555 6777666544332 236999986443
Q ss_pred CcCC-------CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 283 LGID-------LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 283 Lg~e-------~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
=+.. .+.+. ..+-..+.+.|++.++|+|. ..+ .-..|++.|+..|||++|+..
T Consensus 329 gsi~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI------------~~~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 329 GSICTTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIADGGI------------KYSGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp STTCCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCC------------CSHHHHHHHHHTTCSEEEEST
T ss_pred ccccccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEeCCC------------CCHHHHHHHHHhCchhheecH
Confidence 1111 11222 23445667778888999998 654 235788999999999999963
No 43
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=91.43 E-value=0.78 Score=44.81 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=84.0
Q ss_pred HHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCC--CcCCCC
Q 036921 211 VISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGN--LGIDLP 288 (527)
Q Consensus 211 di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgD--Lg~e~~ 288 (527)
.++ .+.+.|+|+|.+.. +..+++.+..+.+++.| ....+. |-....++.+++++...|.|++-.-+ +|..-=
T Consensus 101 ~i~-~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G--~k~Gva--lnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~f 174 (246)
T 3inp_A 101 LIE-SFAKAGATSIVFHP-EASEHIDRSLQLIKSFG--IQAGLA--LNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKF 174 (246)
T ss_dssp HHH-HHHHHTCSEEEECG-GGCSCHHHHHHHHHTTT--SEEEEE--ECTTCCSGGGTTTGGGCSEEEEECSCTTC--CCC
T ss_pred HHH-HHHHcCCCEEEEcc-ccchhHHHHHHHHHHcC--CeEEEE--ecCCCCHHHHHHHHhcCCEEEEeeecCCCCCccc
Confidence 344 34799999999985 44467777777787776 444443 44344567788999989988874322 232211
Q ss_pred chhHHHHHHHHHHHHHHcC--CcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 289 PEKVFLFQKAALYKCNMAG--KPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 289 ~~~v~~~qk~Ii~~c~~~g--Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
.+....--+++-+.+.+.| .++-+ ..+ .|.. +..++..|+|.+...+--....-|.++++.+++
T Consensus 175 i~~~l~KI~~lr~~~~~~~~~~~I~VDGGI--------~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~ 241 (246)
T 3inp_A 175 IPAMLDKAKEISKWISSTDRDILLEIDGGV--------NPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp CTTHHHHHHHHHHHHHHHTSCCEEEEESSC--------CTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhcCCCeeEEEECCc--------CHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHH
Confidence 1233233334444444445 55545 432 3333 466778899999987433334678999888877
Q ss_pred HH
Q 036921 366 IC 367 (527)
Q Consensus 366 i~ 367 (527)
.+
T Consensus 242 ~i 243 (246)
T 3inp_A 242 EL 243 (246)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 44
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=91.11 E-value=5.3 Score=37.66 Aligned_cols=119 Identities=13% Similarity=0.098 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEECCCcHHHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEec
Q 036921 393 HLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLA 472 (527)
Q Consensus 393 ~~~~ia~~av~~a~~~~a~~Ivv~T~sG~tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~ 472 (527)
-++.....|++.|.+++.+-|||+|.+|.||+.+...-.. .+++||.+.--...-.|.. ++.+.+.| --.|+.-+-.
T Consensus 35 NT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~-~~e~~~~L-~~~G~~V~t~ 111 (206)
T 1t57_A 35 NTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLEL-EDEARDAL-LERGVNVYAG 111 (206)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSS-CHHHHHHH-HHHTCEEECC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcC-CHHHHHHH-HhCCCEEEEe
Confidence 4678888899999999999999999999999999886655 8888864322122223432 34444443 2223222111
Q ss_pred CCCC-CCC-----CCc-cCHHHH-----------HHHHHH---HHHHcCCCCCCCEEEEEEec
Q 036921 473 DPRH-PAE-----STN-ATNESV-----------LKVALD---HGKASGVIKSHDRVVVCQKV 514 (527)
Q Consensus 473 ~~~~-~~~-----~~~-~~~e~~-----------i~~a~~---~a~e~g~v~~GD~VVvv~g~ 514 (527)
.... ..+ .|- -..-++ ++.|++ .|.+.|++..|+.||.+.|.
T Consensus 112 tH~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 112 SHALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp SCTTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred eccccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 1100 000 000 001111 133333 35588999999999999997
No 45
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.94 E-value=1.8 Score=46.43 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=74.5
Q ss_pred HhhHHHHHhhcccccccEEEec--CCCCHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHhCCEEEEeCCC
Q 036921 206 DKDKEVISSWGVQNKIDFLSLS--YTRHAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQAADGIILSRGN 282 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~s--fV~s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~sDgImIaRgD 282 (527)
+.+.+.+. ..++.|+|+|.+- .-.+....+.++. +.+.- .++.|++. +-|.+....+.+ .=+|+|.++-|.
T Consensus 228 ~~~~~~a~-~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~--p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~vg~g~ 301 (490)
T 4avf_A 228 ADTGERVA-ALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTF--PDVQVIGGNIATAEAAKALAE--AGADAVKVGIGP 301 (490)
T ss_dssp TTHHHHHH-HHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHC--TTSEEEEEEECSHHHHHHHHH--TTCSEEEECSSC
T ss_pred cchHHHHH-HHhhcccceEEecccCCcchhHHHHHHH-HHHHC--CCceEEEeeeCcHHHHHHHHH--cCCCEEEECCCC
Confidence 45566665 5688999999863 3334322333333 33322 35677776 777766544322 236999996433
Q ss_pred CcC-------CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 283 LGI-------DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 283 Lg~-------e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
=+. ..+.+. ..+-.++.+.|++.++|+|. ..+- -..|+..++..|||++|+.
T Consensus 302 Gs~~~t~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 302 GSICTTRIVAGVGVPQ-ISAIANVAAALEGTGVPLIADGGIR------------FSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp STTCHHHHHTCBCCCH-HHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CcCCCccccCCCCccH-HHHHHHHHHHhccCCCcEEEeCCCC------------CHHHHHHHHHcCCCeeeec
Confidence 111 112222 23445667777778999998 6542 3468888999999999996
No 46
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=90.84 E-value=3.1 Score=42.72 Aligned_cols=118 Identities=15% Similarity=0.255 Sum_probs=69.7
Q ss_pred HHHHHhhcccccccEEEe--cCCCCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHh-CCEEEEe--CCC
Q 036921 209 KEVISSWGVQNKIDFLSL--SYTRHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQA-ADGIILS--RGN 282 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~--sfV~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~-sDgImIa--RgD 282 (527)
.+.+. .+++.|+|+|.+ ++-.+...++.+++ +.+. .++++++ .+-|.+....+ .+. +|+|.++ +|.
T Consensus 107 ~e~a~-~l~eaGad~I~ld~a~G~~~~~~~~i~~-i~~~---~~~~Vivg~v~t~e~A~~l---~~aGaD~I~VG~~~Gs 178 (361)
T 3khj_A 107 IERAK-LLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSK---MNIDVIVGNVVTEEATKEL---IENGADGIKVGIGPGS 178 (361)
T ss_dssp HHHHH-HHHHTTCSEEEECCSCCSBHHHHHHHHH-HHHH---CCCEEEEEEECSHHHHHHH---HHTTCSEEEECSSCCT
T ss_pred HHHHH-HHHHcCcCeEEEeCCCCCcHHHHHHHHH-HHHh---cCCcEEEccCCCHHHHHHH---HHcCcCEEEEecCCCc
Confidence 34443 457999999987 44333322333333 3222 2357775 77777665443 333 6999995 332
Q ss_pred CcC-----CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 283 LGI-----DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 283 Lg~-----e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
... ..+.+. ...-..+.+.++..+.|+|. ..+- ...|++.++..|+|++|+.
T Consensus 179 ~~~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 179 ICTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp TCCHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCCC------------SHHHHHHHHHHTCSEEEES
T ss_pred CCCcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 110 011222 23345566667778999997 5531 2367888999999999985
No 47
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=90.72 E-value=0.55 Score=45.23 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=81.0
Q ss_pred cccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCC--cC-CCCchhH
Q 036921 216 GVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNL--GI-DLPPEKV 292 (527)
Q Consensus 216 ~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDL--g~-e~~~~~v 292 (527)
+.+.|+|+|.+.. +..+++.+..+.+++.| ....+. +-....++.+++++...|.|++-.-+- +- ....+.+
T Consensus 83 ~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G--~k~gva--l~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l 157 (228)
T 3ovp_A 83 MAVAGANQYTFHL-EATENPGALIKDIRENG--MKVGLA--IKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMM 157 (228)
T ss_dssp HHHHTCSEEEEEG-GGCSCHHHHHHHHHHTT--CEEEEE--ECTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGH
T ss_pred HHHcCCCEEEEcc-CCchhHHHHHHHHHHcC--CCEEEE--EcCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHH
Confidence 4789999999975 55557777777777776 444443 444445778889998899888732221 21 1211222
Q ss_pred HHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 293 FLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
. + ++..++. +.|+.+ ..+ .| ..+..++..|+|.+...+--.....|.++++.+++.+.+
T Consensus 158 ~----k-i~~lr~~~~~~~I~VdGGI--------~~-----~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~ 219 (228)
T 3ovp_A 158 P----K-VHWLRTQFPSLDIEVDGGV--------GP-----DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219 (228)
T ss_dssp H----H-HHHHHHHCTTCEEEEESSC--------ST-----TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred H----H-HHHHHHhcCCCCEEEeCCc--------CH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 1 1 2222333 355555 443 23 234667778999999874433356799999888876654
Q ss_pred H
Q 036921 370 A 370 (527)
Q Consensus 370 a 370 (527)
+
T Consensus 220 ~ 220 (228)
T 3ovp_A 220 A 220 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 48
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=90.61 E-value=1.7 Score=41.42 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=80.7
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH---hCCEEEEeCCCC---cCCCC
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ---AADGIILSRGNL---GIDLP 288 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~---~sDgImIaRgDL---g~e~~ 288 (527)
.+.+.|+|+|.+..-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. ..|.+.+..-.- |-..+
T Consensus 82 ~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g----~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~ 157 (228)
T 1h1y_A 82 PLAKAGASGFTFHIEVSRDNWQELIQSIKAKG----MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFM 157 (228)
T ss_dssp HHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT----CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCC
T ss_pred HHHHcCCCEEEECCCCcccHHHHHHHHHHHcC----CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCC
Confidence 34679999999987776655244444455444 455566643344667888888 789998853222 22333
Q ss_pred chhHHHHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHH
Q 036921 289 PEKVFLFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKI 366 (527)
Q Consensus 289 ~~~v~~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i 366 (527)
+..+..+ -+..+.. +.|+.+ ..+ .|. ++..++..|+|++...+---....|.++++.+++.
T Consensus 158 ~~~l~~i----~~~~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~ 220 (228)
T 1h1y_A 158 PEMMEKV----RALRKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKS 220 (228)
T ss_dssp GGGHHHH----HHHHHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHH----HHHHHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 3332222 1222222 789887 553 232 33455555999999975544445799999988876
Q ss_pred HH
Q 036921 367 CA 368 (527)
Q Consensus 367 ~~ 368 (527)
++
T Consensus 221 ~~ 222 (228)
T 1h1y_A 221 VE 222 (228)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 49
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.53 E-value=3.1 Score=44.62 Aligned_cols=123 Identities=16% Similarity=0.204 Sum_probs=75.2
Q ss_pred HhhHHHHHhhcccccccEEEecCC--CCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCCEEEEeCCC
Q 036921 206 DKDKEVISSWGVQNKIDFLSLSYT--RHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAADGIILSRGN 282 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~sfV--~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sDgImIaRgD 282 (527)
+.+.+.+. ..++.|+|+|.+-.. .+...++.+++ +.+.- .++.|++ .+-+.+....+.+ .-+|+|.++-|.
T Consensus 230 ~d~~~~a~-~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~--p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~Vg~g~ 303 (496)
T 4fxs_A 230 PGNEERVK-ALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAY--PHLEIIGGNVATAEGARALIE--AGVSAVKVGIGP 303 (496)
T ss_dssp SCCHHHHH-HHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHC--TTCCEEEEEECSHHHHHHHHH--HTCSEEEECSSC
T ss_pred cchHHHHH-HHHhccCceEEeccccccchHHHHHHHH-HHHHC--CCceEEEcccCcHHHHHHHHH--hCCCEEEECCCC
Confidence 34566665 457899999988543 33322333333 33322 2456666 4777776644432 236999986443
Q ss_pred CcCCC-------CchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 283 LGIDL-------PPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 283 Lg~e~-------~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
=+... +.+ -..+-.++.+.|++.++|+|. ..+ .-..|++.++..|||++|+.
T Consensus 304 Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GGI------------~~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 304 GSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGI------------RFSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp CTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCC------------CSHHHHHHHHHTTCSEEEES
T ss_pred CcCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCCC------------CCHHHHHHHHHcCCCeEEec
Confidence 22111 111 234446777888888999998 653 23468889999999999996
No 50
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.39 E-value=4.3 Score=40.41 Aligned_cols=169 Identities=11% Similarity=0.053 Sum_probs=102.5
Q ss_pred CCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecC-CCCH-----HHHHHHHHHHHHcCCCCCceEEEeecChH
Q 036921 188 SLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSY-TRHA-----EDVRQAREYLSKLGDLSQTQIFAKIENIE 261 (527)
Q Consensus 188 ~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sf-V~s~-----~dv~~lr~~l~~~~~~~~~~IiaKIEt~~ 261 (527)
-|-|-.-++. .++..++..|.+...+.|++.|-+.| +... .|..++.+.+.+. .++.+.+.+.+.+
T Consensus 16 lRDG~Q~~~~-----~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~~~~~ 87 (302)
T 2ftp_A 16 PRDGLQNEKQ-----PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR---PGVTYAALAPNLK 87 (302)
T ss_dssp TTHHHHTSSS-----CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC---TTSEEEEECCSHH
T ss_pred CCCCccCCCC-----CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc---CCCEEEEEeCCHH
Confidence 3555555543 35677777776666779999988754 3321 3444443333321 4566766665544
Q ss_pred hHhhHHHHHHh-CCEEEE-e-CCCC----cCCCCchhHHHHHHHHHHHHHHcCCcEEE--ecchhhhhcCCCCChHhhhh
Q 036921 262 GLTHFDEILQA-ADGIIL-S-RGNL----GIDLPPEKVFLFQKAALYKCNMAGKPAVV--TRVVDSMTDNLRPTRAEATD 332 (527)
Q Consensus 262 av~nldeI~~~-sDgImI-a-RgDL----g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~--Tq~LeSM~~~p~PtraEv~D 332 (527)
.+ +.-++. .|.|+| . -.|+ -+.++.++.....+++++.|+++|+.|-. ..++. -....+-+..++.+
T Consensus 88 ~i---~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~-~e~~~~~~~~~~~~ 163 (302)
T 2ftp_A 88 GF---EAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLG-CPYDGDVDPRQVAW 163 (302)
T ss_dssp HH---HHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTC-BTTTBCCCHHHHHH
T ss_pred HH---HHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEee-CCcCCCCCHHHHHH
Confidence 33 333333 488776 2 2242 12367788888889999999999999753 11110 00111233455666
Q ss_pred HHH-HHHhCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 333 VAN-AVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 333 v~n-av~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
++. +...|+|.+.|. +|.=...|.+.-+.+..+.+.
T Consensus 164 ~~~~~~~~G~d~i~l~-DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 164 VARELQQMGCYEVSLG-DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp HHHHHHHTTCSEEEEE-ESSSCCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHcCCCEEEEe-CCCCCcCHHHHHHHHHHHHHh
Confidence 555 447899999999 665556798888888877643
No 51
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.34 E-value=1.6 Score=45.54 Aligned_cols=117 Identities=15% Similarity=0.265 Sum_probs=70.3
Q ss_pred HHHHhhcccccccEEEe--cCCCCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHh-CCEEEEeC--CCC
Q 036921 210 EVISSWGVQNKIDFLSL--SYTRHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQA-ADGIILSR--GNL 283 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~--sfV~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~-sDgImIaR--gDL 283 (527)
+.++ .+++.|+|+|.+ ++-.+....+.++. +.+. .+++|++ .+-|.+.... +.++ +|+|.++- |..
T Consensus 147 e~~~-~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~---~~i~Vi~g~V~t~e~A~~---a~~aGAD~I~vG~g~Gs~ 218 (400)
T 3ffs_A 147 ERAK-LLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSK---MNIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSI 218 (400)
T ss_dssp HHHH-HHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTT---CCCEEEEEEECSHHHHHH---HHHTTCSEEEECC-----
T ss_pred HHHH-HHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhc---CCCeEEEeecCCHHHHHH---HHHcCCCEEEEeCCCCcC
Confidence 4454 558999999987 66555433344433 3322 2467776 5766555543 3333 69999953 221
Q ss_pred cC-----CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 284 GI-----DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 284 g~-----e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+. ..+.+. ..+-..+.+.|++.++|+|- ..+ ....|++.++..|||++|+.
T Consensus 219 ~~tr~~~g~g~p~-~~al~~v~~~~~~~~IPVIA~GGI------------~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 219 CTTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGI------------RYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp ----CCSCBCCCH-HHHHHHHHHHHTTTTCCEEEESCC------------CSHHHHHHHHTTTCSEEEEC
T ss_pred cccccccccchhH-HHHHHHHHHHHHhcCCCEEecCCC------------CCHHHHHHHHHcCCCEEEEC
Confidence 10 011222 23445666667777999997 553 23578899999999999984
No 52
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=90.30 E-value=8 Score=38.71 Aligned_cols=159 Identities=12% Similarity=0.169 Sum_probs=99.4
Q ss_pred CCCHhhHHHHHhhcccccccEEEec-CCCCH-----HHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCE
Q 036921 203 TLSDKDKEVISSWGVQNKIDFLSLS-YTRHA-----EDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADG 275 (527)
Q Consensus 203 ~lt~~D~~di~~~~~~~g~d~I~~s-fV~s~-----~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDg 275 (527)
.++..|+..|.+...+.|+|.|=+. |+.+. .|..++.+.+.+. .++.+.+-+.+..++ +..++. .|.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~---~~~~~~~l~~~~~~i---~~a~~~g~~~ 97 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE---KGVTYAALVPNQRGL---ENALEGGINE 97 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC---TTCEEEEECCSHHHH---HHHHHHTCSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc---CCCeEEEEeCCHHhH---HHHHhCCcCE
Confidence 3577777777666667899998875 43321 3444444444322 456666666555444 333333 364
Q ss_pred E--EEeCCCC----cCCCCchhHHHHHHHHHHHHHHcCCcEEE--ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEe
Q 036921 276 I--ILSRGNL----GIDLPPEKVFLFQKAALYKCNMAGKPAVV--TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILL 346 (527)
Q Consensus 276 I--mIaRgDL----g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~--Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imL 346 (527)
| +++-.|+ -+....++.....+.+++.|+++|+.|-. ...+ +-....+-+...+.+++. +...|+|.|.|
T Consensus 98 v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 176 (307)
T 1ydo_A 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVF-GCPYEKDVPIEQVIRLSEALFEFGISELSL 176 (307)
T ss_dssp EEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTT-CBTTTBCCCHHHHHHHHHHHHHHTCSCEEE
T ss_pred EEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEe-cCCcCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4 4444453 33455677788889999999999999754 1111 111112234566666665 45789999999
Q ss_pred CCccccCCChHHHHHHHHHHHHH
Q 036921 347 GAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 347 s~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
. +|.=.-.|.+.-++++.+.+.
T Consensus 177 ~-DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 177 G-DTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp E-CSSCCCCHHHHHHHHHHHHTT
T ss_pred c-CCCCCcCHHHHHHHHHHHHHh
Confidence 8 777677899998888887653
No 53
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=90.06 E-value=6.8 Score=39.59 Aligned_cols=167 Identities=13% Similarity=0.099 Sum_probs=103.3
Q ss_pred CcccccCCccccCCCCCHhhHHHHHhhcccccccEEEec-CCCCHHHHHHHHHHHHHcCCCCCceEEEee-cChHhHhhH
Q 036921 189 LFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS-YTRHAEDVRQAREYLSKLGDLSQTQIFAKI-ENIEGLTHF 266 (527)
Q Consensus 189 ~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~s-fV~s~~dv~~lr~~l~~~~~~~~~~IiaKI-Et~~av~nl 266 (527)
|-|..-++.. ++..|+..|.+...+.|++.|=+. ++-+++|.+.++.+.... .++.+.+-. =+.++++..
T Consensus 15 RDG~Q~~~~~-----~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~---~~~~i~~l~r~~~~~i~~a 86 (325)
T 3eeg_A 15 RDGEQVPGCQ-----LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAV---TRPTICALTRAKEADINIA 86 (325)
T ss_dssp GCC------------CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHC---CSSEEEEECCSCHHHHHHH
T ss_pred CCcccCCCCC-----CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhC---CCCEEEEeecCCHHHHHHH
Confidence 4455444443 455666666556567899998774 456888888887765543 456666654 344555543
Q ss_pred HHHHHhC--C--EEEEeCCCCc----CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH
Q 036921 267 DEILQAA--D--GIILSRGNLG----IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 267 deI~~~s--D--gImIaRgDLg----~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav 337 (527)
-+-+.-+ | .++++-.|+- .....++.....+.+++.|+++|+.+.+ .. -++ +-+...+.+++.++
T Consensus 87 ~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~-d~~-----~~~~~~~~~~~~~~ 160 (325)
T 3eeg_A 87 GEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE-DAG-----RADQAFLARMVEAV 160 (325)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE-TGG-----GSCHHHHHHHHHHH
T ss_pred HHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc-ccc-----cchHHHHHHHHHHH
Confidence 2322222 4 3555655542 2344566667778999999999999877 44 121 23345566666654
Q ss_pred -HhCCcEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 338 -LDGSDAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 338 -~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
..|+|.|.|. +|.=.-.|.++-+++..+.++.
T Consensus 161 ~~~G~~~i~l~-DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 161 IEAGADVVNIP-DTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp HHHTCSEEECC-BSSSCCCHHHHHHHHHHHHHHC
T ss_pred HhcCCCEEEec-CccCCcCHHHHHHHHHHHHHhC
Confidence 4599999997 7877788999988888876653
No 54
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.66 E-value=11 Score=38.69 Aligned_cols=167 Identities=10% Similarity=0.088 Sum_probs=111.0
Q ss_pred CcccccCCccccCCCCCHhhHHHHHhhcccccccEEEe-cCCCCHHHHHHHHHHHHHcCCCCCceEEEeec-ChHhHhhH
Q 036921 189 LFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSL-SYTRHAEDVRQAREYLSKLGDLSQTQIFAKIE-NIEGLTHF 266 (527)
Q Consensus 189 ~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~-sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIE-t~~av~nl 266 (527)
|-|-.-|+. .++..|+..|.+...+.|+|.|=+ +++-++.|.+.++.+... . .+..+.+-.= +...++..
T Consensus 21 RDG~Q~~~~-----~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~--~~~~i~~l~r~~~~di~~a 92 (370)
T 3rmj_A 21 RDGEQSPGA-----AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-I--TKSTVCSLSRAIERDIRQA 92 (370)
T ss_dssp CCCTTSTTC-----CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-C--SSSEEEEEEESSHHHHHHH
T ss_pred CccccCCCC-----CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-C--CCCeEEEEecCCHHHHHHH
Confidence 445555554 367788888766656789998866 567788899999886643 2 4555544441 44555433
Q ss_pred HHHHHhC--C--EEEEeCCCCc----CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-H
Q 036921 267 DEILQAA--D--GIILSRGNLG----IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-A 336 (527)
Q Consensus 267 deI~~~s--D--gImIaRgDLg----~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-a 336 (527)
-+-+..+ | .++++-.|+- .....+++......+++.|+++|..|.+ ... ..+-+...+.+++. +
T Consensus 93 ~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed------~~r~~~~~~~~~~~~~ 166 (370)
T 3rmj_A 93 GEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCED------ALRSEIDFLAEICGAV 166 (370)
T ss_dssp HHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEET------GGGSCHHHHHHHHHHH
T ss_pred HHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCC------CCccCHHHHHHHHHHH
Confidence 2222223 4 4666666653 3456678888888999999999999877 541 11223344555555 5
Q ss_pred HHhCCcEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 337 VLDGSDAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 337 v~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
...|+|.|.|. +|.=.-.|.++-+.+..+.++.
T Consensus 167 ~~~Ga~~i~l~-DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 167 IEAGATTINIP-DTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp HHHTCCEEEEE-CSSSCCCHHHHHHHHHHHHHHS
T ss_pred HHcCCCEEEec-CccCCcCHHHHHHHHHHHHHhC
Confidence 67899999997 8877888999988888887653
No 55
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.52 E-value=2 Score=50.10 Aligned_cols=126 Identities=20% Similarity=0.196 Sum_probs=75.8
Q ss_pred HhhHHHHHhhcccccccEEEecCC---------------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHH
Q 036921 206 DKDKEVISSWGVQNKIDFLSLSYT---------------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEIL 270 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~sfV---------------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~ 270 (527)
..+...+.+.+.+.|+|+|.+.+- ++++.+.++.+.+.+. .+++|++|+ ++ .+.++.+++
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~---~~~Pv~vK~-~~-~~~~~~~~a 721 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA---VQIPFFAKL-TP-NVTDIVSIA 721 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH---CSSCEEEEE-CS-CSSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh---hCCceEEEe-CC-ChHHHHHHH
Confidence 444444444555789999999542 4555566666666554 357899999 32 344566665
Q ss_pred Hh-----CCEEEEe-----------------------CCCCcCCCCchhHHHHHHHHHHHHHHc-CCcEEE-ecchhhhh
Q 036921 271 QA-----ADGIILS-----------------------RGNLGIDLPPEKVFLFQKAALYKCNMA-GKPAVV-TRVVDSMT 320 (527)
Q Consensus 271 ~~-----sDgImIa-----------------------RgDLg~e~~~~~v~~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~ 320 (527)
+. .|+|.+. |...+---+....+..-..+-+..++. +.|+|. ..+-
T Consensus 722 ~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~---- 797 (1025)
T 1gte_A 722 RAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID---- 797 (1025)
T ss_dssp HHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC----
T ss_pred HHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC----
Confidence 54 4999981 111111112233344344344444455 799998 6532
Q ss_pred cCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 321 DNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 321 ~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
...|+..++..|+|+||+..
T Consensus 798 --------s~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 798 --------SAESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp --------SHHHHHHHHHTTCSEEEESH
T ss_pred --------CHHHHHHHHHcCCCEEEEee
Confidence 34577888889999999973
No 56
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=89.35 E-value=2.8 Score=39.17 Aligned_cols=133 Identities=13% Similarity=0.104 Sum_probs=77.6
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEE-e--CCCCcCCCCchh
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIIL-S--RGNLGIDLPPEK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImI-a--RgDLg~e~~~~~ 291 (527)
.+.+.|+|+|.+.--.. ++..++.+.+.+.| ..++.-+.+....+.+.++...+|.|++ + +|==|...++..
T Consensus 79 ~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g----~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~ 153 (220)
T 2fli_A 79 AFAQAGADIMTIHTEST-RHIHGALQKIKAAG----MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPEC 153 (220)
T ss_dssp HHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT----SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGG
T ss_pred HHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC----CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHH
Confidence 34789999998875554 55666666666554 3455545333334445555666798865 2 221133333322
Q ss_pred HHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHH
Q 036921 292 VFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKI 366 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i 366 (527)
+.. -+++-+.+... +.|+++ ..+ .| .++..+...|+|++....--..+..|.++++.+.+.
T Consensus 154 ~~~-i~~~~~~~~~~~~~~~i~v~GGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 154 LEK-VATVAKWRDEKGLSFDIEVDGGV--------DN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp HHH-HHHHHHHHHHTTCCCEEEEESSC--------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHhcCCCceEEEECcC--------CH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 221 12333333333 678777 442 23 344556666999999986666667899998887654
No 57
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=89.34 E-value=2.5 Score=42.05 Aligned_cols=170 Identities=15% Similarity=0.106 Sum_probs=101.6
Q ss_pred CcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecC-CCCH-----HHHHHHHHHHHHcCCCCCceEEEeecChHh
Q 036921 189 LFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSY-TRHA-----EDVRQAREYLSKLGDLSQTQIFAKIENIEG 262 (527)
Q Consensus 189 ~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sf-V~s~-----~dv~~lr~~l~~~~~~~~~~IiaKIEt~~a 262 (527)
|-|-.-++. .++..++..|.+...+.|+|.|=+.+ +.+. .|..++.+.+.+. .++.+.+-+.+.++
T Consensus 14 RDG~Q~~~~-----~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~---~~~~~~~l~~~~~~ 85 (298)
T 2cw6_A 14 RDGLQNEKN-----IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF---PGINYPVLTPNLKG 85 (298)
T ss_dssp THHHHTCSS-----CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC---TTCBCCEECCSHHH
T ss_pred CcccCCCCC-----CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC---CCCEEEEEcCCHHh
Confidence 455554543 35667777765566778999988754 3321 3555555555432 24444444455444
Q ss_pred HhhHHHHHHh-CCEEEE--eCCCC----cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH
Q 036921 263 LTHFDEILQA-ADGIIL--SRGNL----GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA 334 (527)
Q Consensus 263 v~nldeI~~~-sDgImI--aRgDL----g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~ 334 (527)
+ +..++. .|.|.| +-.|. -...+.++.....+++++.|+++|+++-+ .-+-=+-....+-+..++.+++
T Consensus 86 i---~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (298)
T 2cw6_A 86 F---EAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVT 162 (298)
T ss_dssp H---HHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHH
T ss_pred H---HHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHH
Confidence 3 333433 365444 33333 12335567777888999999999999865 2211111111123455666666
Q ss_pred H-HHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 335 N-AVLDGSDAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 335 n-av~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
. +...|+|.+.|. +|.=.-.|.+.-++++.+.+..
T Consensus 163 ~~~~~~Ga~~i~l~-DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 163 KKFYSMGCYEISLG-DTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp HHHHHTTCSEEEEE-ETTSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCEEEec-CCCCCcCHHHHHHHHHHHHHhC
Confidence 5 466799999998 6766678999999988887653
No 58
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=89.19 E-value=2.6 Score=40.58 Aligned_cols=134 Identities=11% Similarity=0.073 Sum_probs=81.5
Q ss_pred cccccccEEEecCCC-CHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEE---eCCCCcCCCCchh
Q 036921 216 GVQNKIDFLSLSYTR-HAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIIL---SRGNLGIDLPPEK 291 (527)
Q Consensus 216 ~~~~g~d~I~~sfV~-s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImI---aRgDLg~e~~~~~ 291 (527)
+.+.|+|+|.+..-. + .++.++.+.+++.| ..+.+...-.| -++.+++++...|.|++ -+|==|-... +.
T Consensus 76 ~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G--~k~gv~lnp~t--p~~~~~~~l~~~D~VlvmsV~pGfggQ~f~-~~ 149 (231)
T 3ctl_A 76 LARAGADFITLHPETIN-GQAFRLIDEIRRHD--MKVGLILNPET--PVEAMKYYIHKADKITVMTVDPGFAGQPFI-PE 149 (231)
T ss_dssp HHHHTCSEEEECGGGCT-TTHHHHHHHHHHTT--CEEEEEECTTC--CGGGGTTTGGGCSEEEEESSCTTCSSCCCC-TT
T ss_pred HHHcCCCEEEECcccCC-ccHHHHHHHHHHcC--CeEEEEEECCC--cHHHHHHHHhcCCEEEEeeeccCcCCcccc-HH
Confidence 479999999988544 3 46788888888877 44444444444 47778888889998875 2221122222 22
Q ss_pred HHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC-CccccCCC-hHHHHHHHHHH
Q 036921 292 VFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG-AETLRGLY-PVETISIVGKI 366 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs-~Eta~G~y-P~e~V~~~~~i 366 (527)
...--+++-+...+. +.++.+ ..+ .|.. +..++..|+|.+... +--..... |.++++.+++.
T Consensus 150 ~l~kI~~lr~~~~~~~~~~~I~VdGGI--------~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~ 216 (231)
T 3ctl_A 150 MLDKLAELKAWREREGLEYEIEVDGSC--------NQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQ 216 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESCC--------STTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCceEEEECCc--------CHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHH
Confidence 222223333334333 566665 432 2322 245566799999987 55443445 89999998875
Q ss_pred HH
Q 036921 367 CA 368 (527)
Q Consensus 367 ~~ 368 (527)
+.
T Consensus 217 ~~ 218 (231)
T 3ctl_A 217 IL 218 (231)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 59
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=89.09 E-value=18 Score=35.77 Aligned_cols=167 Identities=14% Similarity=0.109 Sum_probs=106.8
Q ss_pred CCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEec-CCCCHHHHHHHHHHHHHcCCCCCceEEEeecC-hHhHhh
Q 036921 188 SLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS-YTRHAEDVRQAREYLSKLGDLSQTQIFAKIEN-IEGLTH 265 (527)
Q Consensus 188 ~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~s-fV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt-~~av~n 265 (527)
-|-|..-++.. ++..|+..|.+...+.|++.|=+. +..++.|.+.++.+.... ++..+.+-.-+ ..+++.
T Consensus 13 lRDG~Q~~~~~-----~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~---~~~~i~~l~~~~~~di~~ 84 (293)
T 3ewb_X 13 LRDGEQTPGVN-----FDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAI---KHCSVTGLARCVEGDIDR 84 (293)
T ss_dssp TTCCC-----C-----CCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHC---CSSEEEEEEESSHHHHHH
T ss_pred CCCcCcCCCCC-----CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhc---CCCEEEEEecCCHHHHHH
Confidence 35565555443 566777777666667899998664 455777888887765543 56677776643 234433
Q ss_pred HHHHHHhC--C--EEEEeCCCCc----CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-
Q 036921 266 FDEILQAA--D--GIILSRGNLG----IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN- 335 (527)
Q Consensus 266 ldeI~~~s--D--gImIaRgDLg----~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n- 335 (527)
.-+-+..+ | .++++-.|+- .....++.....+++++.|+++|..|.+ .. ..++-+...+.+++.
T Consensus 85 a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~ 158 (293)
T 3ewb_X 85 AEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQT 158 (293)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHH
Confidence 22221112 4 4556656653 3556678888889999999999999887 43 112233444566666
Q ss_pred HHHhCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 336 AVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 336 av~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
+...|+|.|.|. +|.=.-.|.++-++++.+.++
T Consensus 159 ~~~~G~~~i~l~-DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 159 AIDAGATVINIP-DTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp HHHTTCCEEEEE-CSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEec-CCCCCCCHHHHHHHHHHHHHh
Confidence 556799999997 777777899988888887654
No 60
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=88.94 E-value=2.8 Score=42.27 Aligned_cols=105 Identities=10% Similarity=0.205 Sum_probs=64.3
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEE-eCCCCcCCCC-chh
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIIL-SRGNLGIDLP-PEK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImI-aRgDLg~e~~-~~~ 291 (527)
.+.+.|+|+|.+++=...+.++.+++ ..++++.++.+.+-... +.+. +|+|.+ ++ +-|-..+ ...
T Consensus 83 ~a~~~g~d~V~~~~g~p~~~i~~l~~--------~g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g~~~~ 150 (332)
T 2z6i_A 83 LVIEEGVKVVTTGAGNPSKYMERFHE--------AGIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIGKLTT 150 (332)
T ss_dssp HHHHTTCSEEEECSSCGGGTHHHHHH--------TTCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECCSSCH
T ss_pred HHHHCCCCEEEECCCChHHHHHHHHH--------cCCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCCCccH
Confidence 56789999999998554554555543 24789999988765433 3333 699998 43 2222212 111
Q ss_pred HHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 292 VFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+ ..-+++ .+..++|+|. ..+- .-.|+..++..|+|++++.
T Consensus 151 ~-~ll~~i---~~~~~iPViaaGGI~------------~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 151 M-TLVRQV---ATAISIPVIAAGGIA------------DGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp H-HHHHHH---HHHCSSCEEEESSCC------------SHHHHHHHHHTTCSEEEEC
T ss_pred H-HHHHHH---HHhcCCCEEEECCCC------------CHHHHHHHHHcCCCEEEec
Confidence 2 111222 2245899998 6531 1246777888899999986
No 61
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.69 E-value=6.1 Score=42.24 Aligned_cols=122 Identities=15% Similarity=0.163 Sum_probs=72.4
Q ss_pred hHHHHHhhcccccccEEEe--cCCCCHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHhCCEEEEeC--CC
Q 036921 208 DKEVISSWGVQNKIDFLSL--SYTRHAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQAADGIILSR--GN 282 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~--sfV~s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~sDgImIaR--gD 282 (527)
..+.+. .+++.|+|+|.+ ++-.. +...++.+.+.+.- .++.|+++ +.|.+....+.+ .=+|+|.++. |-
T Consensus 256 ~~~~a~-~~~~aG~d~v~i~~~~G~~-~~~~~~i~~i~~~~--~~~pvi~~~v~t~~~a~~l~~--aGad~I~vg~~~G~ 329 (514)
T 1jcn_A 256 DKYRLD-LLTQAGVDVIVLDSSQGNS-VYQIAMVHYIKQKY--PHLQVIGGNVVTAAQAKNLID--AGVDGLRVGMGCGS 329 (514)
T ss_dssp HHHHHH-HHHHTTCSEEEECCSCCCS-HHHHHHHHHHHHHC--TTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSC
T ss_pred hHHHHH-HHHHcCCCEEEeeccCCcc-hhHHHHHHHHHHhC--CCCceEecccchHHHHHHHHH--cCCCEEEECCCCCc
Confidence 455664 568999999998 43222 22222222233321 25788875 877766544433 1269999954 31
Q ss_pred CcCC-----CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 283 LGID-----LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 283 Lg~e-----~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
-... .+.+ .+.....+-+.+++.+.|+|. ..+ ....|+..++..|||++|+..
T Consensus 330 ~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI------------~~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 330 ICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGI------------QTVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCC------------CSHHHHHHHHHTTCSEEEEST
T ss_pred ccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCC------------CCHHHHHHHHHcCCCeeeECH
Confidence 1000 1211 233445555666677999998 553 234688999999999999974
No 62
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=88.39 E-value=2.1 Score=42.06 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=95.5
Q ss_pred CCCCHhhHHHHHhhcccc--cccEEEecCCCCHHHHHHHHHHHHHcCCCC-CceEEEeecChHhHhhHHH--------HH
Q 036921 202 PTLSDKDKEVISSWGVQN--KIDFLSLSYTRHAEDVRQAREYLSKLGDLS-QTQIFAKIENIEGLTHFDE--------IL 270 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~--g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~-~~~IiaKIEt~~av~nlde--------I~ 270 (527)
|..|+.|.+.+-+-+.+. |++.|+++ +..+..+++.|...| . .++|.+-|=-+.|-.+.+. |-
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g--~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~ 96 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQG--TPEIRIATVTNFPHGNDDIDIALAETRAAIA 96 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTT--CTTSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcC--CCCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 556888888776667888 89999875 556788888886434 4 6788888855444333332 22
Q ss_pred HhCCEEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcE--EE-ecchhhhhcCCCCChHh-hhhHHH-HHHhCCcE
Q 036921 271 QAADGIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPA--VV-TRVVDSMTDNLRPTRAE-ATDVAN-AVLDGSDA 343 (527)
Q Consensus 271 ~~sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpv--i~-Tq~LeSM~~~p~PtraE-v~Dv~n-av~~g~D~ 343 (527)
.=+|.|-+ ..|.| .+=.++.+..-.+.+.++|..+|+|+ |+ |-.| +..| +..... ++..|+|.
T Consensus 97 ~GAdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADf 166 (260)
T 1p1x_A 97 YGADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADF 166 (260)
T ss_dssp HTCSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSE
T ss_pred cCCCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCE
Confidence 23465532 12211 01113466666778888888878884 77 6655 5566 434443 67789999
Q ss_pred EEeCCccccCCC----hHHHHHHHHHHHHH
Q 036921 344 ILLGAETLRGLY----PVETISIVGKICAE 369 (527)
Q Consensus 344 imLs~Eta~G~y----P~e~V~~~~~i~~~ 369 (527)
|=-| .|.. -.|.|+.|++.+++
T Consensus 167 VKTS----TGf~~~gAt~e~v~lm~~~I~~ 192 (260)
T 1p1x_A 167 IKTS----TGKVAVNATPESARIMMEVIRD 192 (260)
T ss_dssp EECC----CSCSSCCCCHHHHHHHHHHHHH
T ss_pred EEeC----CCCCCCCCCHHHHHHHHHHHHH
Confidence 8765 4554 56999999998875
No 63
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=88.26 E-value=4.2 Score=41.88 Aligned_cols=121 Identities=18% Similarity=0.229 Sum_probs=69.2
Q ss_pred HhhHHHHHhhcccccccEEEe--cCCCCHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHhCCEEEEeCCC
Q 036921 206 DKDKEVISSWGVQNKIDFLSL--SYTRHAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQAADGIILSRGN 282 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~--sfV~s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~sDgImIaRgD 282 (527)
+.+.+.++ .+++.|+|+|.+ +.-.+ +.+.+..+.+++.. .+++|+++ +-|.+....+.+ .=+|+|.|+-+-
T Consensus 99 ~~~~e~~~-~a~~aGvdvI~id~a~G~~-~~~~e~I~~ir~~~--~~~~Vi~G~V~T~e~A~~a~~--aGaD~I~Vg~g~ 172 (361)
T 3r2g_A 99 ENELQRAE-ALRDAGADFFCVDVAHAHA-KYVGKTLKSLRQLL--GSRCIMAGNVATYAGADYLAS--CGADIIKAGIGG 172 (361)
T ss_dssp HHHHHHHH-HHHHTTCCEEEEECSCCSS-HHHHHHHHHHHHHH--TTCEEEEEEECSHHHHHHHHH--TTCSEEEECCSS
T ss_pred HHHHHHHH-HHHHcCCCEEEEeCCCCCc-HhHHHHHHHHHHhc--CCCeEEEcCcCCHHHHHHHHH--cCCCEEEEcCCC
Confidence 45566665 678999999988 33233 32222223333321 35789996 877766543322 236999995221
Q ss_pred CcCCCCch-----hHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 283 LGIDLPPE-----KVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 283 Lg~e~~~~-----~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
|....-. .+| |-..+..|.++.+|+|. ..+ ..-.|+..|+..|||++|+.
T Consensus 173 -G~~~~tr~~~g~g~p--~l~aI~~~~~~~~PVIAdGGI------------~~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 173 -GSVCSTRIKTGFGVP--MLTCIQDCSRADRSIVADGGI------------KTSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp -SSCHHHHHHHCCCCC--HHHHHHHHTTSSSEEEEESCC------------CSHHHHHHHHHTTCSEEEES
T ss_pred -CcCccccccCCccHH--HHHHHHHHHHhCCCEEEECCC------------CCHHHHHHHHHcCCCEEEEC
Confidence 1100000 011 33444555554459987 553 23468899999999999995
No 64
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.61 E-value=0.88 Score=43.68 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=75.7
Q ss_pred hcccccccEEEecCC--CCHHHHHHHHHHHHHcCCCCCceEEEee--cChHhHhhHHHHHHhCCEEEEeCCCCc--C-CC
Q 036921 215 WGVQNKIDFLSLSYT--RHAEDVRQAREYLSKLGDLSQTQIFAKI--ENIEGLTHFDEILQAADGIILSRGNLG--I-DL 287 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV--~s~~dv~~lr~~l~~~~~~~~~~IiaKI--Et~~av~nldeI~~~sDgImIaRgDLg--~-e~ 287 (527)
.+.+.|+|+|.+..- .+ ++..++.+.+.+.| ..+..-+ .|+ .+.+.+++..+|.|.+..-.-| - ..
T Consensus 80 ~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g----~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~ 152 (230)
T 1tqj_A 80 DFAKAGADIISVHVEHNAS-PHLHRTLCQIRELG----KKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSF 152 (230)
T ss_dssp HHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTT----CEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCC
T ss_pred HHHHcCCCEEEECcccccc-hhHHHHHHHHHHcC----CcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccC
Confidence 347899999999865 33 45556666666655 3444444 444 5567788888998877643332 1 11
Q ss_pred CchhHHHHHHHHHHHHHH--cCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHH
Q 036921 288 PPEKVFLFQKAALYKCNM--AGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVG 364 (527)
Q Consensus 288 ~~~~v~~~qk~Ii~~c~~--~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~ 364 (527)
+ +....--+++-+.+.+ .+.|+.+ ..+ .+ ..+ ......|+|++...+--.....|.++++.++
T Consensus 153 ~-~~~~~~i~~lr~~~~~~~~~~~I~v~GGI--------~~--~~~---~~~~~aGad~vvvGSai~~a~d~~~~~~~l~ 218 (230)
T 1tqj_A 153 I-PEVLPKIRALRQMCDERGLDPWIEVDGGL--------KP--NNT---WQVLEAGANAIVAGSAVFNAPNYAEAIAGVR 218 (230)
T ss_dssp C-GGGHHHHHHHHHHHHHHTCCCEEEEESSC--------CT--TTT---HHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred c-HHHHHHHHHHHHHHHhcCCCCcEEEECCc--------CH--HHH---HHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 1 2222222333333322 3678877 553 22 222 4444559999999755444457888888876
Q ss_pred H
Q 036921 365 K 365 (527)
Q Consensus 365 ~ 365 (527)
+
T Consensus 219 ~ 219 (230)
T 1tqj_A 219 N 219 (230)
T ss_dssp T
T ss_pred H
Confidence 5
No 65
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=87.39 E-value=2.5 Score=40.95 Aligned_cols=136 Identities=16% Similarity=0.094 Sum_probs=80.3
Q ss_pred HHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHc---------CCCCCceEEEeecChHhHhhHHHHHHhCCEEEE--
Q 036921 210 EVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKL---------GDLSQTQIFAKIENIEGLTHFDEILQAADGIIL-- 278 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~---------~~~~~~~IiaKIEt~~av~nldeI~~~sDgImI-- 278 (527)
..+. .+.+.|+|+|.+..-.+ +++.++.+.+.+. | ..+.+...-+|+ ++.+++++...|.|.+
T Consensus 83 ~~i~-~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g--~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMs 156 (237)
T 3cu2_A 83 EVAK-AVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYP--VLIGACLCPETP--ISELEPYLDQIDVIQLLT 156 (237)
T ss_dssp HHHH-HHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEE--CEEEEEECTTSC--GGGGTTTTTTCSEEEEES
T ss_pred HHHH-HHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCC--ceEEEEEeCCCh--HHHHHHHhhcCceeeeee
Confidence 3454 45899999999886555 6677777777665 4 333344433554 6677888888998877
Q ss_pred -eCCCCcCCCCchhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH--hCCcEEEeCCcccc
Q 036921 279 -SRGNLGIDLPPEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL--DGSDAILLGAETLR 352 (527)
Q Consensus 279 -aRgDLg~e~~~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~--~g~D~imLs~Eta~ 352 (527)
.+| +|..--.+....--+++-+...+. +.|+.+ ..+ +. ..+..++. .|+|++...+--..
T Consensus 157 v~pg-fggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~~---~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 157 LDPR-NGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSM----------TL---ELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp EETT-TTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------CH---HHHHHHHHSSSCCCCEEECGGGGS
T ss_pred eccC-cCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCc----------CH---HHHHHHHHhCCCCcEEEEeeHHhC
Confidence 554 222211222222222333333222 577766 443 22 23455666 79999998755433
Q ss_pred CCChHHHHHHHHHH
Q 036921 353 GLYPVETISIVGKI 366 (527)
Q Consensus 353 G~yP~e~V~~~~~i 366 (527)
. .|.++++.+++.
T Consensus 223 ~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 223 G-ELKTNLKVWKSS 235 (237)
T ss_dssp S-CHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHh
Confidence 3 688888887653
No 66
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=87.19 E-value=5.7 Score=38.07 Aligned_cols=133 Identities=11% Similarity=-0.012 Sum_probs=78.0
Q ss_pred HHHHHhhcccccccEEEecC--CCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcC
Q 036921 209 KEVISSWGVQNKIDFLSLSY--TRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGI 285 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sf--V~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~ 285 (527)
.+++. .+++.|+|+|.+-- ..+++.+.++.+.+.+.| +.+++.+-|.+-... ..+. +|.|.+.-..+..
T Consensus 91 ~~~i~-~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g----~~v~~~v~t~eea~~---a~~~Gad~Ig~~~~g~t~ 162 (232)
T 3igs_A 91 LDDVD-ALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH----LLTMADCSSVDDGLA---CQRLGADIIGTTMSGYTT 162 (232)
T ss_dssp HHHHH-HHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT----CEEEEECCSHHHHHH---HHHTTCSEEECTTTTSSS
T ss_pred HHHHH-HHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC----CEEEEeCCCHHHHHH---HHhCCCCEEEEcCccCCC
Confidence 34454 35799999987643 346777888877777644 677777655433322 2222 5877542111211
Q ss_pred C--CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHH
Q 036921 286 D--LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISI 362 (527)
Q Consensus 286 e--~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~ 362 (527)
. .....+. .++..++.++|+|. ..+ -|. .|+..+...|+|++++. |++.+ |-+..+.
T Consensus 163 ~~~~~~~~~~-----~i~~l~~~~ipvIA~GGI---------~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~ 222 (232)
T 3igs_A 163 PDTPEEPDLP-----LVKALHDAGCRVIAEGRY---------NSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGW 222 (232)
T ss_dssp SSCCSSCCHH-----HHHHHHHTTCCEEEESCC---------CSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCCCCCCCHH-----HHHHHHhcCCcEEEECCC---------CCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHH
Confidence 0 1111221 12222233899997 553 233 46677777899999996 66665 8777777
Q ss_pred HHHHHHH
Q 036921 363 VGKICAE 369 (527)
Q Consensus 363 ~~~i~~~ 369 (527)
+.+.+++
T Consensus 223 ~~~~i~~ 229 (232)
T 3igs_A 223 YNDALKK 229 (232)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665544
No 67
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=86.58 E-value=5.7 Score=39.94 Aligned_cols=106 Identities=15% Similarity=0.219 Sum_probs=64.7
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCC-chhH
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLP-PEKV 292 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~-~~~v 292 (527)
.+++.|+|+|.+++=...+.++.++ +. .++++.++-+.+-...+ .+. +|+|.+--.+.|-..+ ...+
T Consensus 97 ~~~~~g~d~V~l~~g~p~~~~~~l~----~~----g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g~~~GG~~G~~~~~ 165 (326)
T 3bo9_A 97 VCIEEKVPVVTFGAGNPTKYIRELK----EN----GTKVIPVVASDSLARMV---ERAGADAVIAEGMESGGHIGEVTTF 165 (326)
T ss_dssp HHHHTTCSEEEEESSCCHHHHHHHH----HT----TCEEEEEESSHHHHHHH---HHTTCSCEEEECTTSSEECCSSCHH
T ss_pred HHHHCCCCEEEECCCCcHHHHHHHH----Hc----CCcEEEEcCCHHHHHHH---HHcCCCEEEEECCCCCccCCCccHH
Confidence 4578999999998876655444443 32 47899998776554433 333 6999993222222222 1122
Q ss_pred HHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 293 FLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
..+ ++ .++..+.|+|. ..+ ....|+..++..|+|++++.
T Consensus 166 ~ll-~~---i~~~~~iPviaaGGI------------~~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 166 VLV-NK---VSRSVNIPVIAAGGI------------ADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHH-HH---HHHHCSSCEEEESSC------------CSHHHHHHHHHHTCSEEEES
T ss_pred HHH-HH---HHHHcCCCEEEECCC------------CCHHHHHHHHHhCCCEEEec
Confidence 111 12 22345899998 653 12457788888899999986
No 68
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=86.43 E-value=2.1 Score=41.46 Aligned_cols=141 Identities=11% Similarity=0.077 Sum_probs=89.8
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhH--------HHHHHhC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHF--------DEILQAA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nl--------deI~~~s 273 (527)
|.-|..|.+.+-+-+.+.|++.|+++ +..+ ..++.+... ..+++.+-|=-+.|-.+. +.|-.=+
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~---~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GA 102 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEK---LGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGA 102 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHH---HTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCC---CCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 55688888877667788999999976 4566 666666542 036677777333332222 2222235
Q ss_pred CEEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcE--EE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeC
Q 036921 274 DGIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPA--VV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLG 347 (527)
Q Consensus 274 DgImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpv--i~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs 347 (527)
|.|=+ ..|.|- +.+..-.+.+.++|...|+|+ |+ |-. +|..|+...+. +...|+|.|=-|
T Consensus 103 dEID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~---------L~~e~i~~a~ria~eaGADfVKTs 168 (234)
T 1n7k_A 103 TELDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPL---------WDDKTLSLLVDSSRRAGADIVKTS 168 (234)
T ss_dssp CEEEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGG---------SCHHHHHHHHHHHHHTTCSEEESC
T ss_pred CEEEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccC---------CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 76643 233321 155555668888898888996 66 653 35677766665 677899998655
Q ss_pred CccccCCCh-----HHHHHH--HHHHHH
Q 036921 348 AETLRGLYP-----VETISI--VGKICA 368 (527)
Q Consensus 348 ~Eta~G~yP-----~e~V~~--~~~i~~ 368 (527)
.|..| .+.|+. |++++.
T Consensus 169 ----TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 ----TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp ----CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred ----CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 56655 788888 876653
No 69
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=86.08 E-value=8.1 Score=37.71 Aligned_cols=128 Identities=15% Similarity=0.025 Sum_probs=80.0
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhH----------hhHHHHHHh-C
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGL----------THFDEILQA-A 273 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av----------~nldeI~~~-s 273 (527)
+..|.+.+-..+.+.|++.|+++ +.-+.... . .++.++.|+++..++ ...++.++. +
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~--~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga 106 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------D--GSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGA 106 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------C--SSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTC
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------c--CCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCC
Confidence 55666655557789999999998 33333333 2 446677777665544 345555554 5
Q ss_pred CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhH-HHHHHhCCcEEEeC
Q 036921 274 DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDV-ANAVLDGSDAILLG 347 (527)
Q Consensus 274 DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv-~nav~~g~D~imLs 347 (527)
|+|-+ |-.++ +-...++..--+++.+.|+++|.|+|+ +..=..-..+. .+..++... .-+...|+|.+=.+
T Consensus 107 ~~v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~-~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 107 SAVGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNE-TAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp SEEEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCT-TCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CEEEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccC-CCHHHHHHHHHHHHHcCCCEEEEc
Confidence 87755 44444 334566777778999999999999987 53200000010 145566553 34778899998887
No 70
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=85.83 E-value=7 Score=38.48 Aligned_cols=126 Identities=13% Similarity=0.079 Sum_probs=78.2
Q ss_pred hcccccccEEEec-CCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcC-CCCchhH
Q 036921 215 WGVQNKIDFLSLS-YTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGI-DLPPEKV 292 (527)
Q Consensus 215 ~~~~~g~d~I~~s-fV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~-e~~~~~v 292 (527)
.+...|+|+|.+. -.-+.+++.++.+...+.| +.+++-+-|.+-++...+. -+|.|-+...||.. +.+++.+
T Consensus 130 ~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lG----l~~lvev~t~ee~~~A~~~--Gad~IGv~~r~l~~~~~dl~~~ 203 (272)
T 3qja_A 130 EARAHGADMLLLIVAALEQSVLVSMLDRTESLG----MTALVEVHTEQEADRALKA--GAKVIGVNARDLMTLDVDRDCF 203 (272)
T ss_dssp HHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHH--TCSEEEEESBCTTTCCBCTTHH
T ss_pred HHHHcCCCEEEEecccCCHHHHHHHHHHHHHCC----CcEEEEcCCHHHHHHHHHC--CCCEEEECCCcccccccCHHHH
Confidence 3578999999982 3345677888888777665 4566666665544333221 36999998767643 2333332
Q ss_pred HHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 293 FLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
. ++ +... ++|++. ..+ -|. .|+......|+|++....---....|-++++.+..
T Consensus 204 ~----~l---~~~v~~~~pvVaegGI---------~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 204 A----RI---APGLPSSVIRIAESGV---------RGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp H----HH---GGGSCTTSEEEEESCC---------CSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred H----HH---HHhCcccCEEEEECCC---------CCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 2 22 2233 688887 542 234 45566666799999987554455678877766543
No 71
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=85.64 E-value=8.3 Score=35.95 Aligned_cols=134 Identities=12% Similarity=0.023 Sum_probs=71.2
Q ss_pred HHHHhhcccccccEEEecCCC--CH-HHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcC
Q 036921 210 EVISSWGVQNKIDFLSLSYTR--HA-EDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGI 285 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV~--s~-~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~ 285 (527)
+.+. .+.+.|+|+|.+.... ++ +.+.++.+.+.+.- .+..++..+-|.+-.. ...+. .|.|+++.....-
T Consensus 79 ~~i~-~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~--~~~~v~~~~~t~~e~~---~~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 79 KEVD-ELIESQCEVIALDATLQQRPKETLDELVSYIRTHA--PNVEIMADIATVEEAK---NAARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp HHHH-HHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHC--TTSEEEEECSSHHHHH---HHHHTTCSEEECTTTTSST
T ss_pred HHHH-HHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhC--CCceEEecCCCHHHHH---HHHHcCCCEEEeCCCcCcC
Confidence 4454 4578999998876543 22 24444444444431 2456666666544322 22222 5999886432221
Q ss_pred C-CCch-hHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHH
Q 036921 286 D-LPPE-KVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISI 362 (527)
Q Consensus 286 e-~~~~-~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~ 362 (527)
. .+.. ..+. .+.+-+.++..+.|++. ..+ -+ ..|+..+...|+|++++. +++-+ |.++.+.
T Consensus 153 ~~~~~~~~~~~-~~~~~~~~~~~~ipvia~GGI---------~~---~~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~ 216 (223)
T 1y0e_A 153 YTQGQLLYQND-FQFLKDVLQSVDAKVIAEGNV---------IT---PDMYKRVMDLGVHCSVVG--GAITR-PKEITKR 216 (223)
T ss_dssp TSTTCCTTHHH-HHHHHHHHHHCCSEEEEESSC---------CS---HHHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCCCCCCCccc-HHHHHHHHhhCCCCEEEecCC---------CC---HHHHHHHHHcCCCEEEEC--hHHcC-cHHHHHH
Confidence 1 1110 1111 12222333446899998 553 23 345566677799999997 44444 7666665
Q ss_pred HHH
Q 036921 363 VGK 365 (527)
Q Consensus 363 ~~~ 365 (527)
+.+
T Consensus 217 ~~~ 219 (223)
T 1y0e_A 217 FVQ 219 (223)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 72
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.57 E-value=4.2 Score=39.00 Aligned_cols=129 Identities=14% Similarity=0.043 Sum_probs=73.1
Q ss_pred HHHHHhhcccccccEEEecC--CCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcC
Q 036921 209 KEVISSWGVQNKIDFLSLSY--TRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGI 285 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sf--V~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~ 285 (527)
.+++. .+.+.|+|+|.+-- ..+++.+.++.+.+.+.| +.+++.+-|.+-... ..+. +|.|.+.--.+..
T Consensus 91 ~~~i~-~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g----~~v~~~v~t~eea~~---a~~~Gad~Ig~~~~g~t~ 162 (229)
T 3q58_A 91 LQDVD-ALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG----LLAMADCSTVNEGIS---CHQKGIEFIGTTLSGYTG 162 (229)
T ss_dssp HHHHH-HHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT----CEEEEECSSHHHHHH---HHHTTCSEEECTTTTSSS
T ss_pred HHHHH-HHHHcCCCEEEECccccCChHHHHHHHHHHHHCC----CEEEEecCCHHHHHH---HHhCCCCEEEecCccCCC
Confidence 34454 45799999987643 346677888777777644 677887655433322 2222 5877543211211
Q ss_pred --CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHH
Q 036921 286 --DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISI 362 (527)
Q Consensus 286 --e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~ 362 (527)
......+ ..++..++.+.|+|. ..+ -|. .|+..+...|+|++++. |++.+ |-...+.
T Consensus 163 ~~~~~~~~~-----~li~~l~~~~ipvIA~GGI---------~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~ 222 (229)
T 3q58_A 163 PITPVEPDL-----AMVTQLSHAGCRVIAEGRY---------NTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQW 222 (229)
T ss_dssp SCCCSSCCH-----HHHHHHHTTTCCEEEESSC---------CSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCcCCCCCH-----HHHHHHHHcCCCEEEECCC---------CCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHH
Confidence 1111122 122222233899997 553 333 46666777799999996 56654 6555554
Q ss_pred HHH
Q 036921 363 VGK 365 (527)
Q Consensus 363 ~~~ 365 (527)
+.+
T Consensus 223 f~~ 225 (229)
T 3q58_A 223 FSH 225 (229)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 73
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=85.56 E-value=3.1 Score=38.43 Aligned_cols=129 Identities=11% Similarity=0.062 Sum_probs=72.8
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee--cChHhHhhHHHHHH-hCCEEEEeCCCCcCCCCchh
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI--ENIEGLTHFDEILQ-AADGIILSRGNLGIDLPPEK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI--Et~~av~nldeI~~-~sDgImIaRgDLg~e~~~~~ 291 (527)
.+.+.|+|+|.++.-...+.+.++++.+.+.| ..+ -++.. .|+.. .+.++.+ -.|.+-+.++-.+...+..-
T Consensus 72 ~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g--~~~-gv~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 72 IAFKAGADLVTVLGSADDSTIAGAVKAAQAHN--KGV-VVDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEE-EEECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHhCCCCEEEEeccCChHHHHHHHHHHHHcC--Cce-EEEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 34789999999876666678888988888766 222 12222 12222 1222322 26887333333221122111
Q ss_pred HHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 292 VFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
.. +++-+.+.. ..|+++ -.+ .|. ++..++..|+|++....--.....|.++++.+.+
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 333333333 788877 443 222 5566788899999987554445568888777654
No 74
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=85.26 E-value=4.3 Score=38.80 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=67.4
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+..+...+.+.+++.|++.|=+.+ ++....+.++++..+. .++.+-+-. .---+..+.-+++ +|+++.+-.|
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~---~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d- 99 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR---PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN- 99 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC---TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC---cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC-
Confidence 334443443467899999999985 5666666665554443 234443332 1112444444444 5999765333
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
..+++.|++.|+|++. +. | .+++..|...|+|.+.+
T Consensus 100 -------------~~v~~~ar~~g~~~i~Gv~-----------t---~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -------------PKIVKLCQDLNFPITPGVN-----------N---PMAIEIALEMGISAVKF 136 (224)
T ss_dssp -------------HHHHHHHHHTTCCEECEEC-----------S---HHHHHHHHHTTCCEEEE
T ss_pred -------------HHHHHHHHHhCCCEEeccC-----------C---HHHHHHHHHCCCCEEEE
Confidence 4567899999999986 54 2 23447788899999998
No 75
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=85.16 E-value=2.3 Score=40.15 Aligned_cols=130 Identities=10% Similarity=0.083 Sum_probs=74.6
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceE-EEeecChHhHhhHHHHHH-hCCEEEEeCCCC----cCCCC
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQI-FAKIENIEGLTHFDEILQ-AADGIILSRGNL----GIDLP 288 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~I-iaKIEt~~av~nldeI~~-~sDgImIaRgDL----g~e~~ 288 (527)
.+.+.|+|+|.++-....+.++++.+.+++.| ....+ +.-.-|.+ .+.++.+ -.|.+.+.+|-. |...+
T Consensus 78 ~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g--~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~ 152 (218)
T 3jr2_A 78 MAFEAGADWITVSAAAHIATIAACKKVADELN--GEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGWT 152 (218)
T ss_dssp HHHHHTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCSC
T ss_pred HHHhcCCCEEEEecCCCHHHHHHHHHHHHHhC--CccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCcCC
Confidence 34789999999987766667888888888776 33332 32334643 3444444 357665543321 22222
Q ss_pred chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHH
Q 036921 289 PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKIC 367 (527)
Q Consensus 289 ~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~ 367 (527)
.+.+..+ +..+..+.|+.+ -.+ .|..+ ..++..|+|++...+--.....|.+++ .+++.+
T Consensus 153 ~~~l~~i-----~~~~~~~~pi~v~GGI--------~~~~~-----~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~ 213 (218)
T 3jr2_A 153 TDDLDKM-----RQLSALGIELSITGGI--------VPEDI-----YLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQI 213 (218)
T ss_dssp HHHHHHH-----HHHHHTTCEEEEESSC--------CGGGG-----GGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHH
T ss_pred HHHHHHH-----HHHhCCCCCEEEECCC--------CHHHH-----HHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHH
Confidence 2222222 222235788877 443 22222 346777999999975444445688877 666655
Q ss_pred H
Q 036921 368 A 368 (527)
Q Consensus 368 ~ 368 (527)
+
T Consensus 214 ~ 214 (218)
T 3jr2_A 214 D 214 (218)
T ss_dssp H
T ss_pred H
Confidence 4
No 76
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=84.59 E-value=5.6 Score=41.25 Aligned_cols=107 Identities=14% Similarity=0.122 Sum_probs=79.7
Q ss_pred hcccccccEEEecCC-----------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCC
Q 036921 215 WGVQNKIDFLSLSYT-----------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNL 283 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV-----------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDL 283 (527)
.+.+.|+|+|...-- -..+.++.++++..+.| +.+++-+-....++-+. +..|.+-||.+++
T Consensus 164 ~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G----l~~~te~~d~~~~~~l~---~~vd~lkIgs~~~ 236 (385)
T 3nvt_A 164 SIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG----LGVISEIVTPADIEVAL---DYVDVIQIGARNM 236 (385)
T ss_dssp HHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT----CEEEEECCSGGGHHHHT---TTCSEEEECGGGT
T ss_pred HHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC----CEEEEecCCHHHHHHHH---hhCCEEEECcccc
Confidence 456789998865421 12578888888887765 78999998888776554 4589999998877
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh-CCcEEEeC
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD-GSDAILLG 347 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~-g~D~imLs 347 (527)
.- ..+++++.+.||||++ |.| ..|-.|+...+..+.. |.+=++|.
T Consensus 237 ~n-----------~~LL~~~a~~gkPVilk~G~--------~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 237 QN-----------FELLKAAGRVDKPILLKRGL--------SATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp TC-----------HHHHHHHHTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cC-----------HHHHHHHHccCCcEEEecCC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 42 2566778889999999 876 3688999888888764 77556664
No 77
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=84.50 E-value=8.5 Score=39.41 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcE
Q 036921 232 AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPA 310 (527)
Q Consensus 232 ~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpv 310 (527)
.++.++++++..+.| +.+++-.=..++++-+ .+. .|.+=||-+|+. ++| +++.+.+.|||+
T Consensus 77 ~e~~~~L~~~~~~~G----i~~~st~fD~~svd~l---~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPv 138 (350)
T 3g8r_A 77 PEQMQKLVAEMKANG----FKAICTPFDEESVDLI---EAHGIEIIKIASCSFT------DWP-----LLERIARSDKPV 138 (350)
T ss_dssp HHHHHHHHHHHHHTT----CEEEEEECSHHHHHHH---HHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCE
T ss_pred HHHHHHHHHHHHHcC----CcEEeccCCHHHHHHH---HHcCCCEEEECccccc------CHH-----HHHHHHhhCCcE
Confidence 355566666666544 5666666555665444 344 799999988874 333 355566789999
Q ss_pred EE-ecchhhhhcCCCCChHhhhhHHHHHHh-CCcEEEeCCccccCCCh
Q 036921 311 VV-TRVVDSMTDNLRPTRAEATDVANAVLD-GSDAILLGAETLRGLYP 356 (527)
Q Consensus 311 i~-Tq~LeSM~~~p~PtraEv~Dv~nav~~-g~D~imLs~Eta~G~yP 356 (527)
|+ |.| -|-.|+...++++.. |.+.++|-.++. ||
T Consensus 139 iLstGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 139 VASTAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp EEECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred EEECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 99 986 288999999988865 678666655543 66
No 78
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=84.36 E-value=11 Score=37.61 Aligned_cols=115 Identities=8% Similarity=0.096 Sum_probs=61.3
Q ss_pred cccccEEEecCC----------CCH----HHHHHHHHHHHH----cCCCCCceEEEeecChHhHhhHHHHHHh-----CC
Q 036921 218 QNKIDFLSLSYT----------RHA----EDVRQAREYLSK----LGDLSQTQIFAKIENIEGLTHFDEILQA-----AD 274 (527)
Q Consensus 218 ~~g~d~I~~sfV----------~s~----~dv~~lr~~l~~----~~~~~~~~IiaKIEt~~av~nldeI~~~-----sD 274 (527)
..|+|+|-+.|- ++. +.++.+|+...+ .| .+.+|+.||=.-...+++.++++. .|
T Consensus 163 ~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g--~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd 240 (336)
T 1f76_A 163 YAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHH--KYVPIAVKIAPDLSEEELIQVADSLVRHNID 240 (336)
T ss_dssp GGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHT--SCCCEEEECCSCCCHHHHHHHHHHHHHTTCS
T ss_pred hccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhccc--ccCceEEEecCCCCHHHHHHHHHHHHHcCCc
Confidence 348999888662 112 334444444321 13 468899998322111233333332 49
Q ss_pred EEEEeCCCCcC----------CC----CchhHHHHHHHHHHHHHH-c--CCcEEE-ecchhhhhcCCCCChHhhhhHHHH
Q 036921 275 GIILSRGNLGI----------DL----PPEKVFLFQKAALYKCNM-A--GKPAVV-TRVVDSMTDNLRPTRAEATDVANA 336 (527)
Q Consensus 275 gImIaRgDLg~----------e~----~~~~v~~~qk~Ii~~c~~-~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~na 336 (527)
+|.+.-+-.+. +. +....+ ..-..+...++ . +.|+|. ..+- ...|+..+
T Consensus 241 ~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~-~~~~~i~~i~~~~~~~ipVi~~GGI~------------~~~da~~~ 307 (336)
T 1f76_A 241 GVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQL-KSTEIIRRLSLELNGRLPIIGVGGID------------SVIAAREK 307 (336)
T ss_dssp EEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHH-HHHHHHHHHHHHHTTSSCEEEESSCC------------SHHHHHHH
T ss_pred EEEEeCCcccccccccccccccCCCcCCchhHH-HHHHHHHHHHHHhCCCCCEEEECCCC------------CHHHHHHH
Confidence 99985321111 11 111122 22234444433 4 799998 6542 34577888
Q ss_pred HHhCCcEEEeC
Q 036921 337 VLDGSDAILLG 347 (527)
Q Consensus 337 v~~g~D~imLs 347 (527)
+..|||+|++.
T Consensus 308 l~~GAd~V~ig 318 (336)
T 1f76_A 308 IAAGASLVQIY 318 (336)
T ss_dssp HHHTCSEEEES
T ss_pred HHCCCCEEEee
Confidence 88899999997
No 79
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.22 E-value=5.5 Score=38.45 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=61.1
Q ss_pred EEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHH-------
Q 036921 224 LSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQ------- 296 (527)
Q Consensus 224 I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~q------- 296 (527)
|.+=...+++++.++-+.+-+.|. . .|-.-.-|+.+++.+.+|.+..+.+.||-|- -+..+.+..+.
T Consensus 37 v~Vir~~~~~~a~~~a~al~~gGi--~-~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGT---Vlt~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 37 IPVIAIDNAEDIIPLGKVLAENGL--P-AAEITFRSDAAVEAIRLLRQAQPEMLIGAGT---ILNGEQALAAKEAGATFV 110 (232)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTC--C-EEEEETTSTTHHHHHHHHHHHCTTCEEEEEC---CCSHHHHHHHHHHTCSEE
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCC--C-EEEEeCCCCCHHHHHHHHHHhCCCCEEeECC---cCCHHHHHHHHHcCCCEE
Confidence 444455666666666665555541 1 2222344566666666666554335555442 12233333322
Q ss_pred ------HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 297 ------KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 297 ------k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
..+++.|+++|.|++- .. -.+++..|...|+|.+-+
T Consensus 111 vsP~~~~~vi~~~~~~gi~~ipGv~--------------TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 111 VSPGFNPNTVRACQEIGIDIVPGVN--------------NPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp ECSSCCHHHHHHHHHHTCEEECEEC--------------SHHHHHHHHHTTCCEEEE
T ss_pred EeCCCCHHHHHHHHHcCCCEEcCCC--------------CHHHHHHHHHcCCCEEEE
Confidence 4788999999999874 32 245668889999999987
No 80
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.84 E-value=5.5 Score=37.54 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=75.4
Q ss_pred HHHhhcccccccEEEecCC--CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEe---CCCCcC
Q 036921 211 VISSWGVQNKIDFLSLSYT--RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS---RGNLGI 285 (527)
Q Consensus 211 di~~~~~~~g~d~I~~sfV--~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIa---RgDLg~ 285 (527)
.+. .+.+.|+|+|.+..- .+ ++..++.+.+.+.| ..++.-+-...-.+.+.++...+|.|++. +|-=|.
T Consensus 83 ~v~-~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g----~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~ 156 (230)
T 1rpx_A 83 RVP-DFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG----AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQ 156 (230)
T ss_dssp HHH-HHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT----SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSC
T ss_pred HHH-HHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC----CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCc
Confidence 443 347899999988765 44 44555666665554 33444442222334455566667977442 443344
Q ss_pred CCCchhHHHHHHHHHHHHHH--cCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHH
Q 036921 286 DLPPEKVFLFQKAALYKCNM--AGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISI 362 (527)
Q Consensus 286 e~~~~~v~~~qk~Ii~~c~~--~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~ 362 (527)
...+..+.. -+++-+.+.+ .+.|+++ ..+ .| ..+..++..|+|++...+--.....|.++++.
T Consensus 157 ~~~~~~~~~-i~~l~~~~~~~~~~~pi~v~GGI--------~~-----~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~ 222 (230)
T 1rpx_A 157 SFIESQVKK-ISDLRKICAERGLNPWIEVDGGV--------GP-----KNAYKVIEAGANALVAGSAVFGAPDYAEAIKG 222 (230)
T ss_dssp CCCTTHHHH-HHHHHHHHHHHTCCCEEEEESSC--------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred cccHHHHHH-HHHHHHHHHhcCCCceEEEECCC--------CH-----HHHHHHHHcCCCEEEEChhhhCCCCHHHHHHH
Confidence 444322222 2223333322 2678777 443 33 23355566699999998665555678888877
Q ss_pred HHH
Q 036921 363 VGK 365 (527)
Q Consensus 363 ~~~ 365 (527)
+.+
T Consensus 223 l~~ 225 (230)
T 1rpx_A 223 IKT 225 (230)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
No 81
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=83.53 E-value=4.1 Score=36.18 Aligned_cols=66 Identities=12% Similarity=0.239 Sum_probs=41.2
Q ss_pred EEeecCCEEEEeeCCCCCCCCcEEeeccc-------hhhhhcCCCCEEEEecccCCC----ceEEEEEEEEEEeeCCeEE
Q 036921 108 ISLKADGSVVLTPDCGQEATSQVLPINFD-------GLAKSVKKGDTIFIGQYLFTG----SETTSVWLEVSEVKGNDVT 176 (527)
Q Consensus 108 i~l~~G~~v~l~~~~~~~~~~~~i~v~~~-------~l~~~v~~gd~i~id~~~~DG----~i~l~V~l~~~~~~~~~v~ 176 (527)
+..+.|..+++|.+-- |++... -+++.|++||.|++. || ....+| +++..+....+.
T Consensus 58 I~t~~g~~L~lTp~H~-------i~v~~~~~~~~~~v~A~~l~~GD~v~~~----~~~~~~~~~~~V-~~v~~~~~~G~y 125 (145)
T 1at0_A 58 LHTDGGAVLTVTPAHL-------VSVWQPESQKLTFVFADRIEEKNQVLVR----DVETGELRPQRV-VKVGSVRSKGVV 125 (145)
T ss_dssp EEETTSCEEEECTTCE-------EEEEETTTTEEEEEEGGGCCTTCEEEEE----CTTTCCEEEEEE-EEEEEEEEEEEE
T ss_pred EEECCCCEEEEeCCCE-------EEEecCCCCcEEEEEHHHCcCCCEEEEe----cCCCCCEEEEEE-EEEEEEEEeeeE
Confidence 4455677777776532 332211 267899999999999 87 234456 666555556677
Q ss_pred EEEEeCcEe
Q 036921 177 CVIKNTATL 185 (527)
Q Consensus 177 ~~v~~~G~l 185 (527)
|=....|.|
T Consensus 126 aPlT~~Gti 134 (145)
T 1at0_A 126 APLTREGTI 134 (145)
T ss_dssp EEEESSSEE
T ss_pred ccccCcEEE
Confidence 755555544
No 82
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=83.51 E-value=6.6 Score=40.87 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=73.3
Q ss_pred HHHHHhhcccccccEEEecCCCCHHHHHHHHHH---HHHcCCCCCceEEEeecC--hHhHhhHHHHHHhCCEEEEeCCCC
Q 036921 209 KEVISSWGVQNKIDFLSLSYTRHAEDVRQAREY---LSKLGDLSQTQIFAKIEN--IEGLTHFDEILQAADGIILSRGNL 283 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~---l~~~~~~~~~~IiaKIEt--~~av~nldeI~~~sDgImIaRgDL 283 (527)
.+.|. ...+.|+|.|-++ |.+.++.+.+.++ |...| .+++++|-|-- +.++..+++..+..|.+=|-||.+
T Consensus 41 v~QI~-~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~--~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNi 116 (406)
T 4g9p_A 41 TAQVL-ELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEG--VEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTL 116 (406)
T ss_dssp HHHHH-HHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTT--CCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSS
T ss_pred HHHHH-HHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcC--CCCceEeeecccHHHHHHHHHHHHhHHhhcccCcccc
Confidence 44454 3468999999998 8888888777654 44556 68999998843 557888888888899999999988
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
|- ..+-..--+.++++|+++|+|+=+
T Consensus 117 g~---~~k~~e~~~~vv~~ak~~~~pIRI 142 (406)
T 4g9p_A 117 GR---GRHKDEHFAEMIRIAMDLGKPVRI 142 (406)
T ss_dssp CS---THHHHHHHHHHHHHHHHHTCCEEE
T ss_pred Cc---cccHHHHHHHHHHHHHHccCCcee
Confidence 73 122334456899999999999655
No 83
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=83.50 E-value=15 Score=37.08 Aligned_cols=149 Identities=12% Similarity=-0.003 Sum_probs=90.3
Q ss_pred CCHhhHHHHHhhcccccccEEEe-----cCCCC-------HHHHHHHHHHHHHcCCCCCceEEEee-cChHhHhhHHHHH
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSL-----SYTRH-------AEDVRQAREYLSKLGDLSQTQIFAKI-ENIEGLTHFDEIL 270 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~-----sfV~s-------~~dv~~lr~~l~~~~~~~~~~IiaKI-Et~~av~nldeI~ 270 (527)
++..++..|.+...+.|+|.|=+ ++..| +.+.+.++.+.. .. .++++.+.. -+..-.+.++...
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~--~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EI--SHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TC--SSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hC--CCCEEEEEecCCcccHHHHHHHH
Confidence 56677777655656789999999 44322 334444555443 32 466777662 2111123444444
Q ss_pred Hh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeC
Q 036921 271 QA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLG 347 (527)
Q Consensus 271 ~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs 347 (527)
+. .|++.|. + +..++ ...+..++.|+++|+.++. -. ..+.-+...+.+++. +...|+|.|.|.
T Consensus 104 ~aGvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~~~------~a~~~~~e~~~~ia~~~~~~Ga~~i~l~ 169 (345)
T 1nvm_A 104 QAGARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGFLM------MSHMIPAEKLAEQGKLMESYGATCIYMA 169 (345)
T ss_dssp HHTCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEEEE------STTSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred hCCcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEEEE------eCCCCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 44 4888774 1 22111 2346788899999998876 21 123334566677666 445689999998
Q ss_pred CccccCCChHHHHHHHHHHHHHH
Q 036921 348 AETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 348 ~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
+=|-.. .|-++-+.+..+.+..
T Consensus 170 DT~G~~-~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 170 DSGGAM-SMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CTTCCC-CHHHHHHHHHHHHHHS
T ss_pred CCcCcc-CHHHHHHHHHHHHHhc
Confidence 554444 5998888888877654
No 84
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=83.28 E-value=15 Score=34.77 Aligned_cols=118 Identities=12% Similarity=0.086 Sum_probs=67.8
Q ss_pred HHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEE-E-eC-CCCcCC
Q 036921 210 EVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGII-L-SR-GNLGID 286 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgIm-I-aR-gDLg~e 286 (527)
+.++ .+.+.|+|+|.++.. ..++.+++.+.+++.| ..++.-+......+.+..+...+|+++ + .+ |-.|..
T Consensus 99 ~~~~-~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g----~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~ 172 (248)
T 1geq_A 99 NFLA-EAKASGVDGILVVDL-PVFHAKEFTEIAREEG----IKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAR 172 (248)
T ss_dssp HHHH-HHHHHTCCEEEETTC-CGGGHHHHHHHHHHHT----CEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC------
T ss_pred HHHH-HHHHCCCCEEEECCC-ChhhHHHHHHHHHHhC----CCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCC
Confidence 4554 458999999999854 5578888888888776 344445543344556777777788433 2 22 222322
Q ss_pred CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 287 LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 287 ~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
-+.. +...+.+-+.++..+.|+++ ..+ = ...|+..+...|+|++.+.
T Consensus 173 ~~~~--~~~~~~i~~l~~~~~~pi~~~GGI---------~---~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 173 EEIP--KTAYDLLRRAKRICRNKVAVGFGV---------S---KREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp -CCC--HHHHHHHHHHHHHCSSCEEEESCC---------C---SHHHHHHHHHTTCSEEEEC
T ss_pred CCCC--hhHHHHHHHHHhhcCCCEEEEeec---------C---CHHHHHHHHHcCCCEEEEc
Confidence 1111 12222232333344899988 653 1 2245566667899999976
No 85
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=83.05 E-value=15 Score=35.93 Aligned_cols=119 Identities=13% Similarity=0.110 Sum_probs=81.6
Q ss_pred hcccccccEEEecCCC--C---------HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCC
Q 036921 215 WGVQNKIDFLSLSYTR--H---------AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNL 283 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~--s---------~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDL 283 (527)
.+.+.|+|+|....-. + .+.++.+++++.+.| +.+++-+-....++-+.+. .|.+-||.+++
T Consensus 45 ~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G----l~~~te~~d~~~~~~l~~~---vd~~kIga~~~ 117 (262)
T 1zco_A 45 FLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG----LVTVTEVMDTRHVELVAKY---SDILQIGARNS 117 (262)
T ss_dssp HHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT----CEEEEECCCGGGHHHHHHH---CSEEEECGGGT
T ss_pred HHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC----CcEEEeeCCHHhHHHHHhh---CCEEEECcccc
Confidence 5567899988775432 1 788999999998766 7899999888887666554 79999998766
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh-CCcEEEe--CCccccCCChHHH
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD-GSDAILL--GAETLRGLYPVET 359 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~-g~D~imL--s~Eta~G~yP~e~ 359 (527)
. . ..+++.+.+.||||++ |.| .+|-.|+.+.+..+.. |.+-++| .|=+..-+||.+.
T Consensus 118 ~------n-----~~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~ 178 (262)
T 1zco_A 118 Q------N-----FELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFT 178 (262)
T ss_dssp T------C-----HHHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSB
T ss_pred c------C-----HHHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhh
Confidence 4 1 2234445558999999 765 4678888887776654 5533333 3322233666553
No 86
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=82.97 E-value=5.1 Score=39.42 Aligned_cols=115 Identities=11% Similarity=0.063 Sum_probs=69.6
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCch-hHH
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPE-KVF 293 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~-~v~ 293 (527)
.+.+.|+|++++|-.- .++..++++.+.+.| +..+--+=.....+.+..|++.++|.+-.-.=.| -.|.. .++
T Consensus 118 ~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~g----l~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~G-vTG~~~~~~ 191 (267)
T 3vnd_A 118 KAQAAGVDSVLIADVP-VEESAPFSKAAKAHG----IAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAG-VTGTESKAG 191 (267)
T ss_dssp HHHHHTCCEEEETTSC-GGGCHHHHHHHHHTT----CEEECEECTTCCHHHHHHHHHHCCSCEEESCCCC-CC-------
T ss_pred HHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcC----CeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCC-CCCCccCCc
Confidence 4468999999998544 467888888888876 2333333222235789999999975543311111 11221 233
Q ss_pred HHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 294 LFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 294 ~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.-....++..|++ ..|+++ ..+ =| -.++..++..|+|+++..
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vGfGI---------~~---~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 192 EPIENILTQLAEFNAPPPLLGFGI---------AE---PEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -CHHHHHHHHHTTTCCCEEECSSC---------CS---HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCc---------CC---HHHHHHHHHcCCCEEEEC
Confidence 3345566666664 689998 663 12 234466788899999986
No 87
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=82.45 E-value=14 Score=35.18 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=64.5
Q ss_pred HhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCc
Q 036921 206 DKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLG 284 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg 284 (527)
..+...+.+.+++.|++.|=+.+ ++....+.++.+..+. .++.+-+-. .---+..+.-+++ +|++..+--|
T Consensus 37 ~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~---~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d-- 108 (225)
T 1mxs_A 37 EEDILPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR---PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT-- 108 (225)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC---TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC--
T ss_pred HHHHHHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC---cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC--
Confidence 33333333467888999988885 5555555555444433 234444432 2111333333333 5888755222
Q ss_pred CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 285 IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 285 ~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
..+++.|+.+|.|.+. +. |. +++..|...|+|.+.+
T Consensus 109 ------------~~v~~~~~~~g~~~i~G~~-----------t~---~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 ------------EDILEAGVDSEIPLLPGIS-----------TP---SEIMMGYALGYRRFKL 145 (225)
T ss_dssp ------------HHHHHHHHHCSSCEECEEC-----------SH---HHHHHHHTTTCCEEEE
T ss_pred ------------HHHHHHHHHhCCCEEEeeC-----------CH---HHHHHHHHCCCCEEEE
Confidence 3688999999999986 54 22 3457788899999988
No 88
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=82.30 E-value=1.8 Score=41.67 Aligned_cols=150 Identities=10% Similarity=-0.019 Sum_probs=89.2
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhh-------HHHHHHhCC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTH-------FDEILQAAD 274 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~n-------ldeI~~~sD 274 (527)
|..|+.|.+.+-+-+.+.|++.|+++ +..+..+++.|. . +++.+-|=-+.|-.+ .++|-.=+|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~-----g-v~v~tvigFP~G~~~~~~k~~E~~~i~~GAd 81 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR-----K-VKLCVVADFPFGALPTASRIALVSRLAEVAD 81 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS-----S-SEEEEEESTTTCCSCHHHHHHHHHHHTTTCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC-----C-CeEEEEeCCCCCCCchHHHHHHHHHHHCCCC
Confidence 56688888887777888999999986 345666655552 3 677777744443222 233222246
Q ss_pred EEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCCcc
Q 036921 275 GIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGAET 350 (527)
Q Consensus 275 gImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~Et 350 (527)
.|-+ ..|.| .+=.++.+..-.+.+.++|...+.|||+ |-.| |..|+...+. ++..|+|.|=-|.==
T Consensus 82 EID~Vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTSTGf 151 (226)
T 1vcv_A 82 EIDVVAPIGLV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSSTGF 151 (226)
T ss_dssp EEEEECCHHHH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEEEecchhhh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 5532 11111 0001234444555666666655677887 7654 6777766665 667899998766111
Q ss_pred c----------cCCChHHHHHHHHHHHHHHh
Q 036921 351 L----------RGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 351 a----------~G~yP~e~V~~~~~i~~~aE 371 (527)
. .|.--++.|+.|++.++++.
T Consensus 152 ~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 152 AEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp CCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 1 12234678999999877654
No 89
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=82.29 E-value=1.3 Score=42.55 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=87.9
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHH--------HHhC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEI--------LQAA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI--------~~~s 273 (527)
|..|..|.+.+-+-+.+.|++.|+++ +..+..+++.+. + .++++.+-+=.+.|-.+.+.. -.=+
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~--~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GA 85 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--H--APFRLVTVVGFPLGYQEKEVKALEAALACARGA 85 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--T--CSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CCceEEEEecCCCCCCchHHHHHHHHHHHHcCC
Confidence 56688888877667788999999876 445666666553 2 457888878665553333222 2224
Q ss_pred CEEEEe--CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCCc
Q 036921 274 DGIILS--RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGAE 349 (527)
Q Consensus 274 DgImIa--RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~E 349 (527)
|.|-+- .|.|- +=..+.+..-.+.+.++|...+.|+|+ |-. +|..|+...+. +...|+|.|=-|
T Consensus 86 devd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs-- 153 (220)
T 1ub3_A 86 DEVDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS-- 153 (220)
T ss_dssp SEEEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC--
T ss_pred CEEEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 655331 12110 001234444445566666555667777 653 46777766666 677899998765
Q ss_pred cccCCC----hHHHHHHHHHHH
Q 036921 350 TLRGLY----PVETISIVGKIC 367 (527)
Q Consensus 350 ta~G~y----P~e~V~~~~~i~ 367 (527)
.|.. -.+.|+.|++++
T Consensus 154 --TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 --TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp --CSSSSCCCCHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHhh
Confidence 4443 458899998764
No 90
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=82.04 E-value=9.2 Score=37.77 Aligned_cols=146 Identities=14% Similarity=0.079 Sum_probs=77.7
Q ss_pred HhhHHHHHhhccccccc-EEEecCC-----------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-
Q 036921 206 DKDKEVISSWGVQNKID-FLSLSYT-----------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA- 272 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d-~I~~sfV-----------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~- 272 (527)
..|.....+.+.+.|+| +|-+.|- .+.+.+.++.+.+.+. .+.+++.|+=---..+++.++++.
T Consensus 105 ~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~---~~~Pv~vKi~~~~~~~~~~~~a~~~ 181 (311)
T 1jub_A 105 AAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF---FTKPLGVKLPPYFDLVHFDIMAEIL 181 (311)
T ss_dssp HHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT---CCSCEEEEECCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHHHH
Confidence 34444443456778999 9988652 2555655555555433 357899998321122234444433
Q ss_pred ----CCEEEEeCCC---CcCC-------C----------CchhHHHHHHHHHHHHHH-c--CCcEEE-ecchhhhhcCCC
Q 036921 273 ----ADGIILSRGN---LGID-------L----------PPEKVFLFQKAALYKCNM-A--GKPAVV-TRVVDSMTDNLR 324 (527)
Q Consensus 273 ----sDgImIaRgD---Lg~e-------~----------~~~~v~~~qk~Ii~~c~~-~--gKpvi~-Tq~LeSM~~~p~ 324 (527)
.|+|.+.-.- +.++ + +....+... ..++..++ . ..|+|. ..+-
T Consensus 182 ~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~GGI~-------- 252 (311)
T 1jub_A 182 NQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGTGGIE-------- 252 (311)
T ss_dssp TTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEESSCC--------
T ss_pred HHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEECCCC--------
Confidence 3888773210 0000 0 111223333 34444444 4 689998 6532
Q ss_pred CChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhh
Q 036921 325 PTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEK 372 (527)
Q Consensus 325 PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~ 372 (527)
...|+..++..|||+|++..---. .-| .+..++.++.+.
T Consensus 253 ----~~~da~~~l~~GAd~V~vg~~~l~-~~p----~~~~~i~~~l~~ 291 (311)
T 1jub_A 253 ----TGQDAFEHLLCGATMLQIGTALHK-EGP----AIFDRIIKELEE 291 (311)
T ss_dssp ----SHHHHHHHHHHTCSEEEECHHHHH-HCT----HHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHcCCCEEEEchHHHh-cCc----HHHHHHHHHHHH
Confidence 335667778889999999733222 123 345555555444
No 91
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=81.70 E-value=17 Score=36.93 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=62.2
Q ss_pred hcccccccEEEecCCC-CHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH-hCCEEEE-eCC---CCcCCCC
Q 036921 215 WGVQNKIDFLSLSYTR-HAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ-AADGIIL-SRG---NLGIDLP 288 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~-s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~-~sDgImI-aRg---DLg~e~~ 288 (527)
.+.+.|+|+|.+++=. +.+.++.+++ . +++++.++-|.+-.. ...+ -+|+|.+ ++. -.|...+
T Consensus 117 ~~~~~g~~~V~~~~g~~~~~~i~~~~~----~----g~~v~~~v~t~~~a~---~a~~~GaD~i~v~g~~~GGh~g~~~~ 185 (369)
T 3bw2_A 117 VLLDDPVPVVSFHFGVPDREVIARLRR----A----GTLTLVTATTPEEAR---AVEAAGADAVIAQGVEAGGHQGTHRD 185 (369)
T ss_dssp HHHHSCCSEEEEESSCCCHHHHHHHHH----T----TCEEEEEESSHHHHH---HHHHTTCSEEEEECTTCSEECCCSSC
T ss_pred HHHhcCCCEEEEeCCCCcHHHHHHHHH----C----CCeEEEECCCHHHHH---HHHHcCCCEEEEeCCCcCCcCCCccc
Confidence 5678999999998754 3455555543 2 357888887755332 2222 2699999 542 1122111
Q ss_pred --------chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 289 --------PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 289 --------~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
...+. .-+++ .+..++|+|. ..+- .-.++..++..|+|+|++.
T Consensus 186 ~~~~~~~~~~~~~-~l~~i---~~~~~iPViaaGGI~------------~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 186 SSEDDGAGIGLLS-LLAQV---REAVDIPVVAAGGIM------------RGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CGGGTTCCCCHHH-HHHHH---HHHCSSCEEEESSCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccccHHH-HHHHH---HHhcCceEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11111 11222 2235899998 6531 2246677888999999986
No 92
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=81.68 E-value=11 Score=37.73 Aligned_cols=105 Identities=11% Similarity=0.084 Sum_probs=61.8
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEE-eCCCCcCCCC---ch
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIIL-SRGNLGIDLP---PE 290 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImI-aRgDLg~e~~---~~ 290 (527)
.+.+.|+|+|.+++=...+.++.+ .+. .++++.++-+.+....+ ...-+|+|.+ +++ -|-..+ ..
T Consensus 91 ~~~~~g~d~V~~~~g~p~~~~~~l----~~~----gi~vi~~v~t~~~a~~~--~~~GaD~i~v~g~~-~GG~~G~~~~~ 159 (328)
T 2gjl_A 91 AIIEAGIRVVETAGNDPGEHIAEF----RRH----GVKVIHKCTAVRHALKA--ERLGVDAVSIDGFE-CAGHPGEDDIP 159 (328)
T ss_dssp HHHHTTCCEEEEEESCCHHHHHHH----HHT----TCEEEEEESSHHHHHHH--HHTTCSEEEEECTT-CSBCCCSSCCC
T ss_pred HHHhcCCCEEEEcCCCcHHHHHHH----HHc----CCCEEeeCCCHHHHHHH--HHcCCCEEEEECCC-CCcCCCCcccc
Confidence 457899999999876554444443 333 36888888776543321 2223699999 431 121111 11
Q ss_pred hHHHHHHHHHHHHH-HcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 291 KVFLFQKAALYKCN-MAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 291 ~v~~~qk~Ii~~c~-~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.+ ..+...+ ..++|++. ..+- .-.|+..++..|+|++++.
T Consensus 160 ~~-----~~l~~v~~~~~iPviaaGGI~------------~~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 160 GL-----VLLPAAANRLRVPIIASGGFA------------DGRGLVAALALGADAINMG 201 (328)
T ss_dssp HH-----HHHHHHHTTCCSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred HH-----HHHHHHHHhcCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 22 2222222 34899998 6531 2346777788899999986
No 93
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=81.64 E-value=11 Score=35.49 Aligned_cols=108 Identities=13% Similarity=0.089 Sum_probs=66.9
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+..+...+.+.+++.|++.|=+.+ ++....+.++.+..+. .+..+-+-. .---+..+.-+++ +|+++.+--|
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~---~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d- 98 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV---PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT- 98 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC---TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC---cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC-
Confidence 334443333467899999999985 5555555555544443 234443322 1111344444444 5999866322
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
..+++.|+.+|.|.+. +. | .+++..|...|+|.+.+
T Consensus 99 -------------~~v~~~~~~~g~~~i~G~~-----------t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -------------EPLLKAATEGTIPLIPGIS-----------T---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -------------HHHHHHHHHSSSCEEEEES-----------S---HHHHHHHHHTTCCEEEE
T ss_pred -------------HHHHHHHHHhCCCEEEecC-----------C---HHHHHHHHHCCCCEEEE
Confidence 3688999999999987 54 2 23457788899999988
No 94
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=81.39 E-value=13 Score=34.16 Aligned_cols=107 Identities=14% Similarity=0.116 Sum_probs=64.1
Q ss_pred CHhhHHHHHhhcccccccEEEecCCC-CH-HHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHH-hCCEEEEeC
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTR-HA-EDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQ-AADGIILSR 280 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~-s~-~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~-~sDgImIaR 280 (527)
+..+...+.+.+.+.|+++|-+.+-. .. +.++++|+.+. .+..|-+ .+.+.+- +++-.+ -+|.| +++
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~-----~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~ 90 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE-----KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSP 90 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH-----TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC-----CCcEEEecccCCHHH---HHHHHHcCCCEE-EcC
Confidence 44444444445567899999775322 22 23556665543 2333333 4455543 233332 36999 776
Q ss_pred CCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 281 GNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 281 gDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+- + ..+++.|+++|+|++. .. |.. ++..++..|+|.+-+.
T Consensus 91 ~~-----~--------~~~~~~~~~~g~~vi~g~~-----------t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 91 HL-----D--------EEISQFCKEKGVFYMPGVM-----------TPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp SC-----C--------HHHHHHHHHHTCEEECEEC-----------SHH---HHHHHHHTTCCEEEET
T ss_pred CC-----C--------HHHHHHHHHcCCcEECCcC-----------CHH---HHHHHHHcCCCEEEEc
Confidence 62 1 4588899999999986 32 333 4667888999998775
No 95
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=80.97 E-value=7.3 Score=38.41 Aligned_cols=113 Identities=17% Similarity=0.182 Sum_probs=69.5
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEE--eC-CCCcCCCCchh
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIIL--SR-GNLGIDLPPEK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImI--aR-gDLg~e~~~~~ 291 (527)
.+.+.|+|++++|=.-- ++..++++.+.+.| +..+--+=.....+.+.+|.+.++|.+- .+ |==|..- .
T Consensus 120 ~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~g----l~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~---~ 191 (271)
T 3nav_A 120 RCQKAGVDSVLIADVPT-NESQPFVAAAEKFG----IQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAET---K 191 (271)
T ss_dssp HHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT----CEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC-----------
T ss_pred HHHHCCCCEEEECCCCH-HHHHHHHHHHHHcC----CeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCccc---C
Confidence 45789999999986543 66888888888876 3333333222235789999999866543 22 1112211 1
Q ss_pred HHHHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 292 VFLFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
++.-....++..|++ ..|+++ ..+ =| -.++..++..|+|+++..
T Consensus 192 ~~~~~~~~v~~vr~~~~~Pv~vGfGI---------st---~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 192 ANMPVHALLERLQQFDAPPALLGFGI---------SE---PAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEECSSC---------CS---HHHHHHHHHTTCSEEEES
T ss_pred CchhHHHHHHHHHHhcCCCEEEECCC---------CC---HHHHHHHHHcCCCEEEEC
Confidence 222345566666665 689998 663 22 245566888899999986
No 96
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=80.73 E-value=15 Score=36.21 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE
Q 036921 232 AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV 311 (527)
Q Consensus 232 ~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi 311 (527)
.+.++.++++..+.| +.+++-+-..+.++-+.+. .|.+-||-+++- +..+++.+.+.||||+
T Consensus 88 ~~gl~~l~~~~~~~G----l~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~-----------n~~ll~~~a~~~kPV~ 149 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAG----LPVVTEVLDPRHVETVSRY---ADMLQIGARNMQ-----------NFPLLREVGRSGKPVL 149 (276)
T ss_dssp HHHHHHHHHHHHHHT----CCEEEECCCGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcC----CcEEEecCCHHHHHHHHHh---CCeEEECccccc-----------CHHHHHHHHccCCeEE
Confidence 678888888888766 7899999888888766664 799999976653 2334555667899999
Q ss_pred E-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEe-C-CccccCCChHHHHHH
Q 036921 312 V-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILL-G-AETLRGLYPVETISI 362 (527)
Q Consensus 312 ~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imL-s-~Eta~G~yP~e~V~~ 362 (527)
+ |.| ..|-.|+....+++. .|.+-++| - +=+..-.||.+.+.+
T Consensus 150 lk~G~--------~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl 196 (276)
T 1vs1_A 150 LKRGF--------GNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDV 196 (276)
T ss_dssp EECCT--------TCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBH
T ss_pred EcCCC--------CCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCH
Confidence 9 775 357788888888665 46643444 2 433333466555443
No 97
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=80.72 E-value=26 Score=32.54 Aligned_cols=129 Identities=12% Similarity=0.007 Sum_probs=69.7
Q ss_pred cccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHH
Q 036921 216 GVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLF 295 (527)
Q Consensus 216 ~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~ 295 (527)
+.+.|+|+|-+..-. ..++.+++... + ..+.+-+.|.+-+.. ....-+|.|+++..--+...+- ..+.-
T Consensus 84 a~~~gad~v~l~~~~--~~~~~~~~~~~--~----~~ig~sv~t~~~~~~--a~~~gaD~i~~~~~f~~~~~~g-~~~~~ 152 (221)
T 1yad_A 84 ALFSTIHRVQLPSGS--FSPKQIRARFP--H----LHIGRSVHSLEEAVQ--AEKEDADYVLFGHVFETDCKKG-LEGRG 152 (221)
T ss_dssp HHTTTCCEEEECTTS--CCHHHHHHHCT--T----CEEEEEECSHHHHHH--HHHTTCSEEEEECCC-----------CH
T ss_pred HHHcCCCEEEeCCCc--cCHHHHHHHCC--C----CEEEEEcCCHHHHHH--HHhCCCCEEEECCccccCCCCC-CCCCC
Confidence 468899999887532 23455555331 2 345555555443221 1222369999986311111000 00111
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
.+.+-+.++..++|++. ..+ +. .++..++..|+|++.+.+--...+.|.++++.+.+.++
T Consensus 153 ~~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 153 VSLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp HHHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 12233334445899988 553 32 35566677899999998655444567788777766554
No 98
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=80.54 E-value=13 Score=38.39 Aligned_cols=119 Identities=17% Similarity=0.236 Sum_probs=67.9
Q ss_pred hHHHHHhhcccccccEEEe--cCCCCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 208 DKEVISSWGVQNKIDFLSL--SYTRHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~--sfV~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+.+.+. .+++.|+|+|.+ ++ .+++.+.++.+.+.+.- .+++|++ -+.+.+-.. ...+. +|+|.++-+ -
T Consensus 154 ~~~~a~-~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~~--~~~pviv~~v~~~~~a~---~a~~~Gad~I~vg~~-~ 225 (404)
T 1eep_A 154 TIERVE-ELVKAHVDILVIDSAH-GHSTRIIELIKKIKTKY--PNLDLIAGNIVTKEAAL---DLISVGADCLKVGIG-P 225 (404)
T ss_dssp HHHHHH-HHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHC--TTCEEEEEEECSHHHHH---HHHTTTCSEEEECSS-C
T ss_pred HHHHHH-HHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHHC--CCCeEEEcCCCcHHHHH---HHHhcCCCEEEECCC-C
Confidence 345554 457899999987 44 33344444444444431 2467775 566654333 33333 599999421 1
Q ss_pred cC--------CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 284 GI--------DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 284 g~--------e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
|. ..+.+. ......+.+.++..+.|+|. ..+- .-.|+..++..|||++++.
T Consensus 226 G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~------------~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 226 GSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR------------FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp STTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC------------CHHHHHHHHHcCCCHHhhC
Confidence 11 011112 22334444555557899997 5531 3467888999999999994
No 99
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=80.01 E-value=3.4 Score=41.22 Aligned_cols=145 Identities=16% Similarity=0.158 Sum_probs=85.5
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHH----H----hC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEIL----Q----AA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~----~----~s 273 (527)
|.-|+.|.+.+-+-+.+.|+..|+++ +..+..+++.|. + ..++|.+=|=-+.|-...+.-+ . =+
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~--s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 140 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--G--TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGA 140 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--T--SSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--C--CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 55688888776556788999999986 668888888874 2 4577777775544433322211 1 14
Q ss_pred CEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHcC---CcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEE
Q 036921 274 DGIILSRGNLGIDLPP---EKVFLFQKAALYKCNMAG---KPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAIL 345 (527)
Q Consensus 274 DgImIaRgDLg~e~~~---~~v~~~qk~Ii~~c~~~g---Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~im 345 (527)
|.|=+- +.++. .+...+.+.|-..+++.+ ..||+ |-. .|..|+...+. +...|+|.|=
T Consensus 141 dEIDmV-----INig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVK 206 (288)
T 3oa3_A 141 SELDMV-----MNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------LTADEIIAGCVLSSLAGADYVK 206 (288)
T ss_dssp SEEEEE-----CCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEE-----eehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---------CCHHHHHHHHHHHHHcCCCEEE
Confidence 544321 22322 233444444444444434 34555 443 36777766555 6678999997
Q ss_pred eCCccccCCChHHHHHHHHHHHH
Q 036921 346 LGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 346 Ls~Eta~G~yP~e~V~~~~~i~~ 368 (527)
-|.==..|.--++.|+.|+++++
T Consensus 207 TSTGf~~~GAT~edv~lmr~~v~ 229 (288)
T 3oa3_A 207 TSTGFNGPGASIENVSLMSAVCD 229 (288)
T ss_dssp CCCSSSSCCCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHH
Confidence 76210112345678999999885
No 100
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=79.86 E-value=41 Score=32.21 Aligned_cols=128 Identities=16% Similarity=0.097 Sum_probs=74.6
Q ss_pred hcccccccEE--Ee-cCCCCHH----HHHHHHHHHHHcCCCCCceEEEee----------cChHhHhhHHHHHHh-----
Q 036921 215 WGVQNKIDFL--SL-SYTRHAE----DVRQAREYLSKLGDLSQTQIFAKI----------ENIEGLTHFDEILQA----- 272 (527)
Q Consensus 215 ~~~~~g~d~I--~~-sfV~s~~----dv~~lr~~l~~~~~~~~~~IiaKI----------Et~~av~nldeI~~~----- 272 (527)
.+++.|+|.| .+ ....+.+ +++++.+...+.| ++++..+ -+. +++++.+..
T Consensus 107 ~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g----~~viv~~~~~G~~l~~~~~~---~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 107 EAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG----MPLIAMMYPRGKHIQNERDP---ELVAHAARLGAELG 179 (273)
T ss_dssp HHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT----CCEEEEEEECSTTCSCTTCH---HHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC----CCEEEEeCCCCcccCCCCCH---hHHHHHHHHHHHcC
Confidence 4578999998 32 2222322 3555566555544 4455544 122 344444222
Q ss_pred CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCC-ChHhhhh-HHHHHHhCCcEEEeCCc
Q 036921 273 ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRP-TRAEATD-VANAVLDGSDAILLGAE 349 (527)
Q Consensus 273 sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~P-traEv~D-v~nav~~g~D~imLs~E 349 (527)
+|.|-++.+ .+++.+ -+.+...+.|++. ..+ .+ +..+.-. +..++..|+|+++....
T Consensus 180 ad~i~~~~~-----~~~~~l-------~~i~~~~~ipvva~GGi--------~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 180 ADIVKTSYT-----GDIDSF-------RDVVKGCPAPVVVAGGP--------KTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CSEEEECCC-----SSHHHH-------HHHHHHCSSCEEEECCS--------CCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCEEEECCC-----CCHHHH-------HHHHHhCCCCEEEEeCC--------CCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 588888741 233222 2233445899988 543 22 2333222 56666789999999877
Q ss_pred cccCCChHHHHHHHHHHHHH
Q 036921 350 TLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 350 ta~G~yP~e~V~~~~~i~~~ 369 (527)
-.....|.++++.+.+++.+
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 76677899988888877654
No 101
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=79.73 E-value=32 Score=36.01 Aligned_cols=165 Identities=10% Similarity=0.103 Sum_probs=102.5
Q ss_pred CCCcccccCCccccCCCCCHhhHHHHHhhcccccccEEEec-CCCCHHHHHHHHHHHHHcCCCCCceEEEee-cChHhHh
Q 036921 187 GSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS-YTRHAEDVRQAREYLSKLGDLSQTQIFAKI-ENIEGLT 264 (527)
Q Consensus 187 ~~~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~s-fV~s~~dv~~lr~~l~~~~~~~~~~IiaKI-Et~~av~ 264 (527)
+-|-|-.-|+.. +|..++..|.+...+.|+|.|=+. ..-++.|...++.+. +.+ ....+.+.+ .+.+++
T Consensus 46 TLRDG~Q~~~~~-----~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~--~~~~v~~~~r~~~~di- 116 (423)
T 3ivs_A 46 TLREGEQFANAF-----FDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLG--LKCKILTHIRCHMDDA- 116 (423)
T ss_dssp TTTGGGGSTTCC-----CCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSC--CSSEEEEEEESCHHHH-
T ss_pred CCCCCCCCCCCC-----cCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcC--CCCEEEEeeccChhhH-
Confidence 456777777764 466777777666667899999884 466777777776654 344 445555432 333333
Q ss_pred hHHHHHHh-CC--EEEEeCCCCcC----CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-
Q 036921 265 HFDEILQA-AD--GIILSRGNLGI----DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN- 335 (527)
Q Consensus 265 nldeI~~~-sD--gImIaRgDLg~----e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n- 335 (527)
+..++. .| .++++-.|+-. ....+++.....++++.|+++|..|.+ .. ++. +.+...+.+++.
T Consensus 117 --~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--da~----r~d~~~~~~v~~~ 188 (423)
T 3ivs_A 117 --RVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--DSF----RSDLVDLLSLYKA 188 (423)
T ss_dssp --HHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--SGG----GSCHHHHHHHHHH
T ss_pred --HHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--cCc----CCCHHHHHHHHHH
Confidence 222322 35 44556555432 334567777778899999999999887 43 111 233444555555
Q ss_pred HHHhCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 336 AVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 336 av~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
+...|+|.|.|. +|.=.-.|.++-++++.+...
T Consensus 189 ~~~~Ga~~i~l~-DTvG~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 189 VDKIGVNRVGIA-DTVGCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp HHHHCCSEEEEE-ETTSCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCccccC-CccCcCCHHHHHHHHHHHHhh
Confidence 456799999997 787777899988888777653
No 102
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=79.21 E-value=5.4 Score=38.23 Aligned_cols=128 Identities=12% Similarity=0.086 Sum_probs=75.7
Q ss_pred ccEEEecCCCCHHHHHHHHH---HHHHcCCCCCceEEEeecChHhHhhHHHHHH--hCCEEEEeCCCC---cCCCCchhH
Q 036921 221 IDFLSLSYTRHAEDVRQARE---YLSKLGDLSQTQIFAKIENIEGLTHFDEILQ--AADGIILSRGNL---GIDLPPEKV 292 (527)
Q Consensus 221 ~d~I~~sfV~s~~dv~~lr~---~l~~~~~~~~~~IiaKIEt~~av~nldeI~~--~sDgImIaRgDL---g~e~~~~~v 292 (527)
+|++.+-.-.+.+++.++.+ .+++.| ..+.+-.+-.| -++.+++++. ..|.|++..-+- |-......+
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G--~k~gvalnp~t--p~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l 161 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNN--LWCGISIKPKT--DVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMM 161 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTT--CEEEEEECTTS--CGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcC--CeEEEEeCCCC--cHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHH
Confidence 89988775544436777777 777776 44444444445 4778899999 789998754333 222322222
Q ss_pred HHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 293 FLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
..++ ++-+... +.++.+ ..+ +.. .+..++..|+|.+...+--.....|.++++.+++.++
T Consensus 162 ~ki~-~lr~~~~--~~~I~VdGGI----------~~~---ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 162 GKVS-FLRKKYK--NLNIQVDGGL----------NIE---TTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHH-HHHHHCT--TCEEEEESSC----------CHH---HHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhcc--CCeEEEECCC----------CHH---HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 2221 1111111 666666 443 222 3455566799999987443334469999998877543
No 103
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=78.99 E-value=24 Score=35.82 Aligned_cols=122 Identities=18% Similarity=0.128 Sum_probs=68.3
Q ss_pred hHHHHHhhcccc--cccEEEecCC-CCHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 208 DKEVISSWGVQN--KIDFLSLSYT-RHAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 208 D~~di~~~~~~~--g~d~I~~sfV-~s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~-sDgImIaRgD 282 (527)
+.+.+. ..++. |+|++.+..- ....++.+.-+.+.+.. .+++|+++ +-|.+.. ....++ +|+|.++-|-
T Consensus 119 ~~~~~~-~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~--~~~~vi~g~v~t~e~A---~~a~~aGaD~I~v~~g~ 192 (351)
T 2c6q_A 119 DFEQLE-QILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRF--PQHTIMAGNVVTGEMV---EELILSGADIIKVGIGP 192 (351)
T ss_dssp HHHHHH-HHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHC--TTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSC
T ss_pred HHHHHH-HHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhc--CCCeEEEEeCCCHHHH---HHHHHhCCCEEEECCCC
Confidence 344443 33555 8998776432 22333333333343332 24667654 6654433 333333 6999986332
Q ss_pred CcCCC-------CchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 283 LGIDL-------PPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 283 Lg~e~-------~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
=+.+. +.+ ....-..+.+.|+..+.|+|. ..+- .-.|++.|+..|||++++..
T Consensus 193 G~~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 193 GSVCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp STTBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred CcCcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccH
Confidence 00010 111 123335566677778999998 6542 35788999999999999864
No 104
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=78.67 E-value=18 Score=37.06 Aligned_cols=98 Identities=15% Similarity=0.251 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcE
Q 036921 231 HAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPA 310 (527)
Q Consensus 231 s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpv 310 (527)
+.++.++++++..+.| +.+++-+=+.++++-+++. -.|.+=||-+|+. +++ +++++.+.|||+
T Consensus 89 ~~e~~~~L~~~~~~~G----i~~~st~~d~~svd~l~~~--~v~~~KI~S~~~~------n~~-----LL~~va~~gkPv 151 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKG----MIFISTLFSRAAALRLQRM--DIPAYKIGSGECN------NYP-----LIKLVASFGKPI 151 (349)
T ss_dssp CHHHHHHHHHHHHHTT----CEEEEEECSHHHHHHHHHH--TCSCEEECGGGTT------CHH-----HHHHHHTTCSCE
T ss_pred CHHHHHHHHHHHHHhC----CeEEEeeCCHHHHHHHHhc--CCCEEEECccccc------CHH-----HHHHHHhcCCeE
Confidence 4567778888887755 7889888888887666552 1599999988875 332 356667789999
Q ss_pred EE-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEeCCccccCCChH
Q 036921 311 VV-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILLGAETLRGLYPV 357 (527)
Q Consensus 311 i~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imLs~Eta~G~yP~ 357 (527)
|+ |.| -|-.|+...+.++. .|.+.++|-. +-.||.
T Consensus 152 iLstGm---------at~~Ei~~Ave~i~~~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 152 ILSTGM---------NSIESIKKSVEIIREAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp EEECTT---------CCHHHHHHHHHHHHHHTCCEEEEEC---CCCSSC
T ss_pred EEECCC---------CCHHHHHHHHHHHHHcCCCEEEEec---cCCCCC
Confidence 99 986 27899988888776 4677777732 334765
No 105
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=78.66 E-value=9.3 Score=37.17 Aligned_cols=112 Identities=16% Similarity=0.119 Sum_probs=65.2
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEe--C-CCCcCCCCchh
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS--R-GNLGIDLPPEK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIa--R-gDLg~e~~~~~ 291 (527)
.+.+.|+|++++|-.- .+++.++.+.+.+.| +.++.-+.-....+.+.+|++.++|.+.. . |=-|...+.
T Consensus 117 ~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~g----l~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~-- 189 (262)
T 2ekc_A 117 LSREKGIDGFIVPDLP-PEEAEELKAVMKKYV----LSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKL-- 189 (262)
T ss_dssp HHHHTTCCEEECTTCC-HHHHHHHHHHHHHTT----CEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC----------
T ss_pred HHHHcCCCEEEECCCC-HHHHHHHHHHHHHcC----CcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCc--
Confidence 4568999999998654 577888888888776 23333343334456788999988654322 1 112222221
Q ss_pred HH-HHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 292 VF-LFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 292 v~-~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+ .-....++..+++ +.|+++ ..+ =|. .++.. +..|+|+++..
T Consensus 190 -~~~~~~~~v~~vr~~~~~pv~vG~GI---------~t~---e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 190 -PYERIKKKVEEYRELCDKPVVVGFGV---------SKK---EHARE-IGSFADGVVVG 234 (262)
T ss_dssp --CHHHHHHHHHHHHHCCSCEEEESSC---------CSH---HHHHH-HHTTSSEEEEC
T ss_pred -CcccHHHHHHHHHhhcCCCEEEeCCC---------CCH---HHHHH-HHcCCCEEEEC
Confidence 1 1122444555554 789988 663 122 23344 67899999986
No 106
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=78.51 E-value=24 Score=33.75 Aligned_cols=148 Identities=11% Similarity=0.034 Sum_probs=86.2
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee-------cC----hHhHhhHHHHHHhC---
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI-------EN----IEGLTHFDEILQAA--- 273 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI-------Et----~~av~nldeI~~~s--- 273 (527)
+.++..+++.+.|+|+|=+......+++.++++.+.+.| -.+..+.-- .. .++++.+.+.++.+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~g--l~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 116 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRN--IKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGEL 116 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSS--CEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcC--CeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 343333467899999999998877889999999998776 222212110 01 23455666666653
Q ss_pred --CEEEEeCCCCcC--CCC-----chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcE
Q 036921 274 --DGIILSRGNLGI--DLP-----PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDA 343 (527)
Q Consensus 274 --DgImIaRgDLg~--e~~-----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~ 343 (527)
+.|.+..|.-.. ..| ++.+...-+++...|+++|..+.+ +. ..+..+...|-.++.++...+ +.+.
T Consensus 117 Ga~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~--~~~~~~~~~~~~~~~~ll~~v--~~~~ 192 (287)
T 3kws_A 117 GSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL--NRKECFYLRQVADAASLCRDI--NNPG 192 (287)
T ss_dssp TCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC--CTTTCSSCCCHHHHHHHHHHH--CCTT
T ss_pred CCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec--CcccCcccCCHHHHHHHHHHc--CCCC
Confidence 677776553211 111 245556667888899999998776 43 111233455666777766665 3343
Q ss_pred EEeCCccc----cCCChHHHHH
Q 036921 344 ILLGAETL----RGLYPVETIS 361 (527)
Q Consensus 344 imLs~Eta----~G~yP~e~V~ 361 (527)
+-+.-+|. .|..|.+.++
T Consensus 193 vg~~~D~~h~~~~g~d~~~~l~ 214 (287)
T 3kws_A 193 VRCMGDFWHMTWEETSDMGAFI 214 (287)
T ss_dssp EEEEEEHHHHHHHCSCHHHHHH
T ss_pred eeEEeehHHHHhcCCCHHHHHH
Confidence 44433332 2444544443
No 107
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=77.67 E-value=4.7 Score=43.14 Aligned_cols=53 Identities=19% Similarity=0.291 Sum_probs=45.2
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 27 PAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 27 ~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
..+-.+.+.+|...++.+.++.|+++|+++.=||++||..+.+.++++.+|+.
T Consensus 217 ~grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 217 QGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp TSCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ccceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 34566778899888899999999999999999999999888777777777764
No 108
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=77.08 E-value=27 Score=36.92 Aligned_cols=120 Identities=13% Similarity=0.162 Sum_probs=67.9
Q ss_pred HHHHHhhcccccccEEEecCCC--CHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCCEEEEeCCCCcC
Q 036921 209 KEVISSWGVQNKIDFLSLSYTR--HAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAADGIILSRGNLGI 285 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~--s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sDgImIaRgDLg~ 285 (527)
.+.+. ++++.|+|.|.+.+.. .....+.++. +.+.- .+..|++ -+-+.+....+.+ .-+|+|.++-|-=+.
T Consensus 239 ~~~a~-~l~~aGvd~v~i~~~~G~~~~~~e~i~~-i~~~~--p~~pvi~g~~~t~e~a~~l~~--~G~d~I~v~~~~G~~ 312 (494)
T 1vrd_A 239 MERVE-KLVKAGVDVIVIDTAHGHSRRVIETLEM-IKADY--PDLPVVAGNVATPEGTEALIK--AGADAVKVGVGPGSI 312 (494)
T ss_dssp HHHHH-HHHHTTCSEEEECCSCCSSHHHHHHHHH-HHHHC--TTSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCSTT
T ss_pred HHHHH-HHHHhCCCEEEEEecCCchHHHHHHHHH-HHHHC--CCceEEeCCcCCHHHHHHHHH--cCCCEEEEcCCCCcc
Confidence 45564 6789999999986543 2222223322 33221 2345554 3555544433322 125999995432110
Q ss_pred C-------CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 286 D-------LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 286 e-------~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
. .+.+. ......+.+.++..+.|+|. ..+- .-.|+..++..|||++++.
T Consensus 313 ~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 313 CTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp CHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 0 11112 23344555666667999998 6542 3468899999999999985
No 109
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=76.92 E-value=9.9 Score=37.11 Aligned_cols=112 Identities=10% Similarity=0.101 Sum_probs=72.4
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEE--EEeCCCCcCCCCc-hh
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGI--ILSRGNLGIDLPP-EK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgI--mIaRgDLg~e~~~-~~ 291 (527)
.+.+.|+|++++|-. -.|+..++++.+.+.| +..|--+=-....+.+.+|.+.++|. ++.+ .| -.|. ..
T Consensus 111 ~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~G----l~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~--~G-vTG~~~~ 182 (252)
T 3tha_A 111 KAKSLGICALIVPEL-SFEESDDLIKECERYN----IALITLVSVTTPKERVKKLVKHAKGFIYLLAS--IG-ITGTKSV 182 (252)
T ss_dssp HHHHTTEEEEECTTC-CGGGCHHHHHHHHHTT----CEECEEEETTSCHHHHHHHHTTCCSCEEEECC--SC-SSSCSHH
T ss_pred HHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcC----CeEEEEeCCCCcHHHHHHHHHhCCCeEEEEec--CC-CCCcccC
Confidence 457899999999987 5577888999888877 23333332222368899999998766 3332 11 1222 23
Q ss_pred HHHHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 292 VFLFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+..-.+..++..|++ ++|+++ ..+ =|+..+ . .+..++|++...
T Consensus 183 ~~~~~~~~v~~vr~~~~~Pv~vGfGI---------st~e~a---~-~~~~~ADGVIVG 227 (252)
T 3tha_A 183 EEAILQDKVKEIRSFTNLPIFVGFGI---------QNNQDV---K-RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEESSC---------CSHHHH---H-HHTTTSSEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEcCc---------CCHHHH---H-HHHhcCCEEEEC
Confidence 444456777877776 789998 663 334433 3 334579999885
No 110
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=76.09 E-value=7.3 Score=37.80 Aligned_cols=148 Identities=15% Similarity=0.100 Sum_probs=85.1
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHH--------HhC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEIL--------QAA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~--------~~s 273 (527)
|.-|+.|.+.+-+-+.+.|+..|+++ +..+..+++.|. | ..++|.+=|=-+.|-...+.-+ .=+
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~--s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 109 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--G--TGVKVCTVIGFPLGATPSEVKAYETKVAVEQGA 109 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--T--SSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--C--CCCeEEEEeccCCCCCchHHHHHHHHHHHHcCC
Confidence 56688888776556788999999985 567888888884 3 4577777775544443322211 124
Q ss_pred CEEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCCc
Q 036921 274 DGIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGAE 349 (527)
Q Consensus 274 DgImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~E 349 (527)
|.|=+ ..|.|- +=.++.+..-.+.+.++|...-.+||+ |-.| |..|+..... +...|+|.|=-|.=
T Consensus 110 dEIDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVKTSTG 179 (239)
T 3ngj_A 110 EEVDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVKTSTG 179 (239)
T ss_dssp SEEEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred CEEEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEECCCC
Confidence 54432 111110 001123333334555555432245666 5543 6677766655 46679999977621
Q ss_pred cccCCChHHHHHHHHHHH
Q 036921 350 TLRGLYPVETISIVGKIC 367 (527)
Q Consensus 350 ta~G~yP~e~V~~~~~i~ 367 (527)
=..|---++.|+.|++.+
T Consensus 180 f~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 180 FGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhh
Confidence 112233468999999875
No 111
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=75.69 E-value=6.3 Score=37.36 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=69.1
Q ss_pred cccccccEEEecCC---CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCC-cCCCCc--
Q 036921 216 GVQNKIDFLSLSYT---RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNL-GIDLPP-- 289 (527)
Q Consensus 216 ~~~~g~d~I~~sfV---~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDL-g~e~~~-- 289 (527)
+.+.|+|+|.+..- ...+++.++.+...+.| +.++.-+-+.+-.+.+.++ -.+-|-+.+.++ | .|.
T Consensus 78 ~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G----l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~ 149 (219)
T 2h6r_A 78 IKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG----LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPV 149 (219)
T ss_dssp HHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT----CEEEEEESSSHHHHHHTTT--CCSEEEECCCC----------
T ss_pred HHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC----CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCC
Confidence 46899999999885 45566777666666655 4556655433333333222 235666777776 3 221
Q ss_pred -hhHHH-HHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHH
Q 036921 290 -EKVFL-FQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIV 363 (527)
Q Consensus 290 -~~v~~-~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~ 363 (527)
..-+. ++ .+.+..++. +.|++. ..+ =+. .++..+...|+|+++..+-.-.-..|.+.++-+
T Consensus 150 ~t~~~~~~~-~~~~~ir~~~~~~~ii~ggGI---------~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 150 SKANPEVVE-GTVRAVKEINKDVKVLCGAGI---------SKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp ------CSH-HHHHHHHHHCTTCEEEECSSC---------CSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred ccCCHHHHH-HHHHHHHhccCCCeEEEEeCc---------CcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 11111 22 344444443 678887 543 122 334445567999999875444445676666544
No 112
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=75.50 E-value=7 Score=38.41 Aligned_cols=144 Identities=16% Similarity=0.134 Sum_probs=84.9
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHH--------HhC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEIL--------QAA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~--------~~s 273 (527)
|.-|+.|.+.+-+-+.+.|+..|+++ +..+..+++.|. | ..++|.+=|=.+.|-...+.-+ .=+
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--g--s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 125 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--G--TDVKVVTVVGFPLGANETRTKAHEAIFAVESGA 125 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--T--SCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--C--CCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCC
Confidence 45688888776556788999999985 567888888884 3 4578888775555543332222 224
Q ss_pred CEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHc-CCc--EEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEE
Q 036921 274 DGIILSRGNLGIDLPP---EKVFLFQKAALYKCNMA-GKP--AVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAIL 345 (527)
Q Consensus 274 DgImIaRgDLg~e~~~---~~v~~~qk~Ii~~c~~~-gKp--vi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~im 345 (527)
|.|=+ -+.++. .+...+.+.|-..+.+. |+| ||+ |-.| |..|+..... +...|+|.|=
T Consensus 126 dEIDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~A~~ia~eaGADfVK 191 (260)
T 3r12_A 126 DEIDM-----VINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL---------DTEEKIAACVISKLAGAHFVK 191 (260)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEE-----EeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC---------CHHHHHHHHHHHHHhCcCEEE
Confidence 54432 122222 13334444433333332 444 444 4433 6778876666 6678999987
Q ss_pred eCCccccCCChHHHHHHHHHHH
Q 036921 346 LGAETLRGLYPVETISIVGKIC 367 (527)
Q Consensus 346 Ls~Eta~G~yP~e~V~~~~~i~ 367 (527)
-|.==..|---++.|+.|++.+
T Consensus 192 TSTGf~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 192 TSTGFGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp CCCSSSSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHh
Confidence 7621112234578999998875
No 113
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=75.00 E-value=25 Score=34.27 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=70.5
Q ss_pred HhhHHHHHhhccc-ccccEEEecCC------------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH-
Q 036921 206 DKDKEVISSWGVQ-NKIDFLSLSYT------------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ- 271 (527)
Q Consensus 206 ~~D~~di~~~~~~-~g~d~I~~sfV------------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~- 271 (527)
..+.....+.+.+ .|+|+|-+.|- .+++.+.++.+.+.+. -+..|+.|+=- ++.++.++++
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~---~~~pv~vk~~~--~~~~~~~~a~~ 184 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV---SKVPLYVKLSP--NVTDIVPIAKA 184 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH---CSSCEEEEECS--CSSCSHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh---cCCCEEEEECC--ChHHHHHHHHH
Confidence 4455544434445 89999977542 3455556665556544 24678888731 2233334332
Q ss_pred ---h-CCEEEEeCC------CCcC-----------CCCchhHHHHHHHHHHHHH-HcCCcEEE-ecchhhhhcCCCCChH
Q 036921 272 ---A-ADGIILSRG------NLGI-----------DLPPEKVFLFQKAALYKCN-MAGKPAVV-TRVVDSMTDNLRPTRA 328 (527)
Q Consensus 272 ---~-sDgImIaRg------DLg~-----------e~~~~~v~~~qk~Ii~~c~-~~gKpvi~-Tq~LeSM~~~p~Ptra 328 (527)
. .|+|.+.-+ |... -.+....+.. -..++.++ ..+.|+|. ..+-
T Consensus 185 l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~GGI~------------ 251 (311)
T 1ep3_A 185 VEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGMGGVA------------ 251 (311)
T ss_dssp HHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEECSSCC------------
T ss_pred HHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEECCcC------------
Confidence 2 499998321 1100 0112222222 23444443 44899998 6531
Q ss_pred hhhhHHHHHHhCCcEEEeCCccccC
Q 036921 329 EATDVANAVLDGSDAILLGAETLRG 353 (527)
Q Consensus 329 Ev~Dv~nav~~g~D~imLs~Eta~G 353 (527)
...|+..++..|+|++++..--..+
T Consensus 252 ~~~d~~~~l~~GAd~V~vg~~~l~~ 276 (311)
T 1ep3_A 252 NAQDVLEMYMAGASAVAVGTANFAD 276 (311)
T ss_dssp SHHHHHHHHHHTCSEEEECTHHHHC
T ss_pred CHHHHHHHHHcCCCEEEECHHHHcC
Confidence 2346777888899999997543333
No 114
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=74.49 E-value=9.5 Score=37.13 Aligned_cols=112 Identities=15% Similarity=0.101 Sum_probs=66.0
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEE-E-eCC-CCcCCCCc-h
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGII-L-SRG-NLGIDLPP-E 290 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgIm-I-aRg-DLg~e~~~-~ 290 (527)
.+.+.|+|+|+++-.-. +++.++.+.+.+.| +..+.-+.-....+.+.+|++.++|.+ + ..- -=|..-+. +
T Consensus 117 ~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g----~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~ 191 (268)
T 1qop_A 117 RCEQVGVDSVLVADVPV-EESAPFRQAALRHN----IAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGAL 191 (268)
T ss_dssp HHHHHTCCEEEETTCCG-GGCHHHHHHHHHTT----CEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--
T ss_pred HHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcC----CcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCc
Confidence 34689999999986654 67888888888776 233333332244567889999887443 2 211 11221121 1
Q ss_pred hHHHHHHHHHHHHHH-cCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 291 KVFLFQKAALYKCNM-AGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 291 ~v~~~qk~Ii~~c~~-~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.+. ..++..++ .+.|+++ ..+ =| -.++..++..|+|+++..
T Consensus 192 ~~~----~~i~~lr~~~~~pi~vggGI---------~t---~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 192 PLH----HLIEKLKEYHAAPALQGFGI---------SS---PEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp CCH----HHHHHHHHTTCCCEEEESSC---------CS---HHHHHHHHHTTCSEEEEC
T ss_pred hHH----HHHHHHHhccCCcEEEECCC---------CC---HHHHHHHHHcCCCEEEEC
Confidence 111 22222333 3789988 663 11 234566678899999986
No 115
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=74.35 E-value=18 Score=36.06 Aligned_cols=120 Identities=7% Similarity=0.013 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhc
Q 036921 295 FQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKV 373 (527)
Q Consensus 295 ~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~ 373 (527)
.-.-+...|+..|.++.+ . |..+....+...-..|++.+...++. . .-++++...+++++-...
T Consensus 84 ~g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~l~~~~~~~ 148 (325)
T 3dwg_A 84 TGISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAEG---G-SNTAVATAKELAATNPSW 148 (325)
T ss_dssp HHHHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECSTT---T-HHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---C-HHHHHHHHHHHHHhCCCe
Confidence 345677888999999876 2 22222233444455699988776431 2 356766666654432211
Q ss_pred cchhhhhhhhhcccCCCCChH---HHHHHHHHHHHHhcC-CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 374 FNQDLYFKKTVKCVGEPMTHL---ESIASSAVRAAIKVK-ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~---~~ia~~av~~a~~~~-a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
+ +...| .++. .-....+.++..+++ .+.|||.+-+|.|..-+++ ..|.+.|+++-+
T Consensus 149 ~-~~~~~----------~np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~ 212 (325)
T 3dwg_A 149 V-MLYQY----------GNPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP 212 (325)
T ss_dssp B-CCCTT----------TCHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEE
T ss_pred E-eCCCC----------CCHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEee
Confidence 1 11111 1121 122334556666664 8999999999999766655 489999999854
No 116
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=73.22 E-value=49 Score=34.72 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=72.5
Q ss_pred hhHHHHHhhcccccccEEEecCCC--CHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCC--
Q 036921 207 KDKEVISSWGVQNKIDFLSLSYTR--HAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGN-- 282 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sfV~--s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgD-- 282 (527)
...+.+. ++.+.|+|.|++.... .......++.+..... .-+.+...+-+++....+.+ .-+|+|.++-|-
T Consensus 233 ~~~~~a~-~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p--~~pvi~G~v~t~~~a~~~~~--~Gad~I~vg~g~g~ 307 (491)
T 1zfj_A 233 DTFERAE-ALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFP--NRTLIAGNIATAEGARALYD--AGVDVVKVGIGPGS 307 (491)
T ss_dssp THHHHHH-HHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCS--SSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCCT
T ss_pred hHHHHHH-HHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCC--CCcEeCCCccCHHHHHHHHH--cCCCEEEECccCCc
Confidence 3456665 6789999999987642 1222222222222221 22334556666655543322 236999997431
Q ss_pred CcC-----CCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 283 LGI-----DLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 283 Lg~-----e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.+. ..+.+ .+...+.+...|+..+.|+|. ..+ .-..|+..++..|||++++.
T Consensus 308 ~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi------------~~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 308 ICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGI------------KYSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp TBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCC------------CSHHHHHHHHHTTCSEEEES
T ss_pred ceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCC------------CCHHHHHHHHHcCCcceeeC
Confidence 000 01112 234456777788888999998 653 23468899999999999995
No 117
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=72.55 E-value=12 Score=35.02 Aligned_cols=129 Identities=9% Similarity=0.051 Sum_probs=71.7
Q ss_pred ccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCce--EEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCc----h
Q 036921 217 VQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQ--IFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPP----E 290 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~--IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~----~ 290 (527)
.+.|+|+|.+..--..+.++.+.+.+.+.| .... ++.-+ |....+.+.++ . .+-+.+.++-++.+.|+ +
T Consensus 77 ~~~Gad~itvh~~~g~~~l~~~~~~~~~~g--~~~~~~ll~~~-t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 77 FEANADWVTVICCADINTAKGALDVAKEFN--GDVQIELTGYW-TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHTTCSEEEEETTSCHHHHHHHHHHHHHTT--CEEEEEECSCC-CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HhCCCCEEEEeccCCHHHHHHHHHHHHHcC--CCceeeeeeCC-ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 689999999987666666888888887766 3321 22011 12333444443 2 34444444433433333 3
Q ss_pred hHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 291 KVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 291 ~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
++..+ -+.+ ..+.|+++ -.+ .|.. +..++..|+|++....--.....|.++++.+++.++
T Consensus 152 ~i~~l----r~~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 152 DITAI----KRLS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIA 212 (216)
T ss_dssp HHHHH----HHHH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHH----HHhc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHH
Confidence 33222 2222 33566776 432 2222 255677799999987544444569898888876554
No 118
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=72.21 E-value=17 Score=36.61 Aligned_cols=121 Identities=17% Similarity=0.260 Sum_probs=65.0
Q ss_pred HhhHHHHHhhccccc--ccEEEecCCC-CHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHh-CCEEEEeC
Q 036921 206 DKDKEVISSWGVQNK--IDFLSLSYTR-HAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQA-ADGIILSR 280 (527)
Q Consensus 206 ~~D~~di~~~~~~~g--~d~I~~sfV~-s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~-sDgImIaR 280 (527)
+.+.+.++ ...+.| +|+|.+..-. +.....+..+.+.+.- ..+.++.. +-+.+ ......++ +|+|.++-
T Consensus 105 ~~~~~~a~-~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~--~~~~vi~G~v~s~e---~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 105 EDEYEFVQ-QLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL--PESFVIAGNVGTPE---AVRELENAGADATKVGI 178 (336)
T ss_dssp HHHHHHHH-HHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC--TTSEEEEEEECSHH---HHHHHHHHTCSEEEECS
T ss_pred HHHHHHHH-HHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC--CCCEEEECCcCCHH---HHHHHHHcCCCEEEEec
Confidence 44555564 457888 9998764322 2222222222233321 24566665 65543 33333443 59999931
Q ss_pred --CC-------CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 281 --GN-------LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 281 --gD-------Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
|= .+...| .+ ....+.+.+++.+.|+|. ..+- --.|+..++..|||++|+..
T Consensus 179 hgG~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iGr 240 (336)
T 1ypf_A 179 GPGKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIGS 240 (336)
T ss_dssp SCSTTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEESG
T ss_pred CCCceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeCh
Confidence 10 111111 00 122334444455999998 6542 34788999999999999963
No 119
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=72.20 E-value=26 Score=32.03 Aligned_cols=123 Identities=14% Similarity=0.046 Sum_probs=65.5
Q ss_pred cccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCC-C--C---cCCCCc
Q 036921 216 GVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRG-N--L---GIDLPP 289 (527)
Q Consensus 216 ~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRg-D--L---g~e~~~ 289 (527)
+.+.|+|+|.++.-.- ++..++++. . ...+..-+.|.+.+... ...-+|.|++... + - +...++
T Consensus 82 a~~~gad~v~l~~~~~--~~~~~~~~~--~----~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~~ 151 (215)
T 1xi3_A 82 ALAVDADGVQLGPEDM--PIEVAKEIA--P----NLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIGL 151 (215)
T ss_dssp HHHHTCSEEEECTTSC--CHHHHHHHC--T----TSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCHH
T ss_pred HHHcCCCEEEECCccC--CHHHHHHhC--C----CCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcCH
Confidence 3578889988764321 233444432 1 23444445665443221 1223699988541 1 0 122223
Q ss_pred hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 290 EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 290 ~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
+.+. ++ ++...+|++. ..+ .| .++..+...|+|++.+++--...+.|.+.++.+.+.++
T Consensus 152 ~~l~----~l---~~~~~~pvia~GGI--------~~-----~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 152 EGLR----KI---VESVKIPVVAIGGI--------NK-----DNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HHHH----HH---HHHCSSCEEEESSC--------CT-----TTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHH----HH---HHhCCCCEEEECCc--------CH-----HHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 3222 22 2334899988 543 22 24566667799999998654445567777776666554
No 120
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=71.53 E-value=39 Score=31.90 Aligned_cols=134 Identities=13% Similarity=0.008 Sum_probs=77.1
Q ss_pred hhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEe---e---------------cChHhHhhHHH
Q 036921 207 KDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAK---I---------------ENIEGLTHFDE 268 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaK---I---------------Et~~av~nlde 268 (527)
.+.++..+.+.+.|+|+|=+.+- ...+++++++.+.+.| +.+.+- . +..++++.+.+
T Consensus 23 ~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~g----l~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 97 (269)
T 3ngf_A 23 VPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHN----LTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDI 97 (269)
T ss_dssp SCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTT----CEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcC----CcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHH
Confidence 34443334678999999988753 3457899999999877 333321 0 01245556666
Q ss_pred HHHhC-----CEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHcCCcEEE-e-cchhhhhcCCCCChHhhhhHHHHH
Q 036921 269 ILQAA-----DGIILSRGNLGIDLP----PEKVFLFQKAALYKCNMAGKPAVV-T-RVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 269 I~~~s-----DgImIaRgDLg~e~~----~~~v~~~qk~Ii~~c~~~gKpvi~-T-q~LeSM~~~p~PtraEv~Dv~nav 337 (527)
.++.+ +.|.+..| ..-..+ ++.+...-+++...|.+.|..+.+ + .-.+ +-.+...|..++.++...+
T Consensus 98 ~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~-~~~~~~~~~~~~~~l~~~v 175 (269)
T 3ngf_A 98 ALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRN-MPGYFIVHQLEAVGLVKRV 175 (269)
T ss_dssp HHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTT-STTBSCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCccc-CccchhcCHHHHHHHHHHh
Confidence 66543 67777666 332232 235555566788888888887665 3 1110 1122345666666666665
Q ss_pred HhCCcEEEeCCc
Q 036921 338 LDGSDAILLGAE 349 (527)
Q Consensus 338 ~~g~D~imLs~E 349 (527)
+.+.+-+.-+
T Consensus 176 --~~~~vg~~~D 185 (269)
T 3ngf_A 176 --NRPNVAVQLD 185 (269)
T ss_dssp --CCTTEEEEEE
T ss_pred --CCCCCCeEEE
Confidence 4444444333
No 121
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=71.26 E-value=35 Score=34.90 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=59.3
Q ss_pred ccccccEEEec-------CCC---CHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHh-CCEEEEeCCCCc
Q 036921 217 VQNKIDFLSLS-------YTR---HAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQA-ADGIILSRGNLG 284 (527)
Q Consensus 217 ~~~g~d~I~~s-------fV~---s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~-sDgImIaRgDLg 284 (527)
.+.|+|++.+. ++. +.+++.++++. .+++++++ |-|.+... ...+. +|+|+|++|--+
T Consensus 175 ~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~-------~~~pvi~ggi~t~e~a~---~~~~~Gad~i~vg~Gg~~ 244 (393)
T 2qr6_A 175 IKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGS-------LDVPVIAGGVNDYTTAL---HMMRTGAVGIIVGGGENT 244 (393)
T ss_dssp HHTTCSEEEEECSSCCSSCCCC-----CHHHHHHH-------CSSCEEEECCCSHHHHH---HHHTTTCSEEEESCCSCC
T ss_pred HHCCCCEEEEeCCccccccCCCcccHHHHHHHHHh-------cCCCEEECCcCCHHHHH---HHHHcCCCEEEECCCccc
Confidence 56799988764 222 33455555443 23567764 44544332 22222 599999875311
Q ss_pred C----CCCchhHHHHHHHHHHHH----HHcC---CcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 285 I----DLPPEKVFLFQKAALYKC----NMAG---KPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 285 ~----e~~~~~v~~~qk~Ii~~c----~~~g---Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
. ..+... ...-..+.+.+ .+.+ .|+|. ..+- .-.|+..++..|||++++..
T Consensus 245 ~~~~~~~g~~~-~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 245 NSLALGMEVSM-ATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLGS 307 (393)
T ss_dssp HHHHTSCCCCH-HHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEECG
T ss_pred ccccCCCCCCh-HHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 1 111111 11222223332 2245 89998 6542 34688999999999999964
No 122
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=71.07 E-value=29 Score=32.41 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=59.8
Q ss_pred hhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhH
Q 036921 214 SWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKV 292 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v 292 (527)
+.+++.|+++|=+.+ +++...+.++.+. + . +..+-+-. .---+.++.-+++ +|++..+..|
T Consensus 32 ~~l~~gGv~~iel~~-k~~~~~~~i~~~~-~-~---~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d---------- 93 (207)
T 2yw3_A 32 RVLEEEGVGALEITL-RTEKGLEALKALR-K-S---GLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL---------- 93 (207)
T ss_dssp HHHHHTTCCEEEEEC-SSTHHHHHHHHHT-T-S---SCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC----------
T ss_pred HHHHHcCCCEEEEeC-CChHHHHHHHHHh-C-C---CCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC----------
Confidence 466889999999985 5555554444432 2 1 22333322 1112444444443 5999865322
Q ss_pred HHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 293 FLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
..+++.|+..|.|.+. +. | .+++..|...|+|.+.+
T Consensus 94 ----~~v~~~~~~~g~~~i~G~~-----------t---~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 ----EEVAALAQARGVPYLPGVL-----------T---PTEVERALALGLSALKF 130 (207)
T ss_dssp ----HHHHHHHHHHTCCEEEEEC-----------S---HHHHHHHHHTTCCEEEE
T ss_pred ----HHHHHHHHHhCCCEEecCC-----------C---HHHHHHHHHCCCCEEEE
Confidence 2678889999999987 54 3 33457778889999988
No 123
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=70.92 E-value=23 Score=33.43 Aligned_cols=131 Identities=14% Similarity=0.083 Sum_probs=67.6
Q ss_pred HHHHhhcccccccEEEecC--CCCHHHHHHHHHHHHHcCCCCCceEE--E-------eecCh--------HhHhhHHHHH
Q 036921 210 EVISSWGVQNKIDFLSLSY--TRHAEDVRQAREYLSKLGDLSQTQIF--A-------KIENI--------EGLTHFDEIL 270 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sf--V~s~~dv~~lr~~l~~~~~~~~~~Ii--a-------KIEt~--------~av~nldeI~ 270 (527)
+++. .+++.|+|+|.+.- ..+++.+.++.+.+.. ..+.+- + ++++. ..++.+.++.
T Consensus 88 ~~~~-~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~----~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 162 (252)
T 1ka9_F 88 EDAR-KLLLSGADKVSVNSAAVRRPELIRELADHFGA----QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGV 162 (252)
T ss_dssp HHHH-HHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG----GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred HHHH-HHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC----CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHH
Confidence 4454 34678999988864 4555556666554421 111111 1 12211 2244455555
Q ss_pred Hh-CCEEEEe-CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 271 QA-ADGIILS-RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 271 ~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+. +++|++. ++-=+...++ .+ ..+-+.++..+.|++. ..+ -+.. |+......|+|++|..
T Consensus 163 ~~G~~~i~~~~~~~~g~~~g~-~~----~~i~~l~~~~~ipvia~GGI---------~~~~---d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 163 ELGAGEILLTSMDRDGTKEGY-DL----RLTRMVAEAVGVPVIASGGA---------GRME---HFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHTCCEEEEEETTTTTTCSCC-CH----HHHHHHHHHCSSCEEEESCC---------CSHH---HHHHHHHTTCSEEEES
T ss_pred HcCCCEEEEecccCCCCcCCC-CH----HHHHHHHHHcCCCEEEeCCC---------CCHH---HHHHHHHCCCHHHHHH
Confidence 55 6888875 2211222222 11 1122233455899998 653 3334 4455555699999987
Q ss_pred CccccCC-ChHHHHHH
Q 036921 348 AETLRGL-YPVETISI 362 (527)
Q Consensus 348 ~Eta~G~-yP~e~V~~ 362 (527)
.--..+. -|.++.+.
T Consensus 226 sal~~~~~~~~~~~~~ 241 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKRY 241 (252)
T ss_dssp HHHHTTSSCHHHHHHH
T ss_pred HHHHcCCCCHHHHHHH
Confidence 5554555 44455444
No 124
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=70.71 E-value=17 Score=35.94 Aligned_cols=146 Identities=13% Similarity=0.065 Sum_probs=75.4
Q ss_pred HhhHHHHHhhccccccc---EEEecCC-----------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH
Q 036921 206 DKDKEVISSWGVQNKID---FLSLSYT-----------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ 271 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d---~I~~sfV-----------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~ 271 (527)
..|.....+.+.+.|+| +|-+.|- .+.+.+.++.+.+.+. -+.+|+.|+=.--..+++.++++
T Consensus 105 ~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~---~~~Pv~vK~~~~~~~~~~~~~a~ 181 (314)
T 2e6f_A 105 VEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA---YGLPFGVKMPPYFDIAHFDTAAA 181 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH---HCSCEEEEECCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHH
Confidence 34444433355677899 8888653 2555555555555433 24679999842212223444343
Q ss_pred h------CCEEEEeCCC-----CcC-----CC----------CchhHHHHHHHHHHHH-HHc-CCcEEE-ecchhhhhcC
Q 036921 272 A------ADGIILSRGN-----LGI-----DL----------PPEKVFLFQKAALYKC-NMA-GKPAVV-TRVVDSMTDN 322 (527)
Q Consensus 272 ~------sDgImIaRgD-----Lg~-----e~----------~~~~v~~~qk~Ii~~c-~~~-gKpvi~-Tq~LeSM~~~ 322 (527)
. .|+|.+.-.- +.. .+ +....+... ..++.+ +.. +.|+|. ..+-
T Consensus 182 ~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~-~~i~~v~~~~~~ipvi~~GGI~------ 254 (314)
T 2e6f_A 182 VLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTAL-ANVNAFYRRCPDKLVFGCGGVY------ 254 (314)
T ss_dssp HHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHH-HHHHHHHHHCTTSEEEEESSCC------
T ss_pred HHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHH-HHHHHHHHhcCCCCEEEECCCC------
Confidence 2 5777653211 100 00 111123233 344444 444 799998 6531
Q ss_pred CCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhh
Q 036921 323 LRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEK 372 (527)
Q Consensus 323 p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~ 372 (527)
...|+..++..|||+|++..---. .-| .+..++.++.+.
T Consensus 255 ------~~~da~~~l~~GAd~V~ig~~~l~-~~p----~~~~~i~~~l~~ 293 (314)
T 2e6f_A 255 ------SGEDAFLHILAGASMVQVGTALQE-EGP----GIFTRLEDELLE 293 (314)
T ss_dssp ------SHHHHHHHHHHTCSSEEECHHHHH-HCT----THHHHHHHHHHH
T ss_pred ------CHHHHHHHHHcCCCEEEEchhhHh-cCc----HHHHHHHHHHHH
Confidence 235677788889999999744332 123 245555554443
No 125
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=70.70 E-value=64 Score=30.36 Aligned_cols=144 Identities=17% Similarity=0.137 Sum_probs=79.7
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHH-------HHH-hC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDE-------ILQ-AA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nlde-------I~~-~s 273 (527)
|..|+.|.+.+-+-+.+.|++.|+++ ++-+...++.+. .+++.+-++.+.|...... .++ -+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~------~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Ga 84 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK------KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGA 84 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS------SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc------CCceeeEecCCCCccchhhhHHHHHHHHHcCC
Confidence 56788888877655668999998754 445666666552 3577777877666644332 222 24
Q ss_pred CEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCCc
Q 036921 274 DGIILSRGNLGIDLPP---EKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGAE 349 (527)
Q Consensus 274 DgImIaRgDLg~e~~~---~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~E 349 (527)
|+|=+ -+.++- .+...+.+. +++.+++..|+++--++|+ +.-|..|+.+++. +...|+|+|..|.-
T Consensus 85 d~Id~-----viN~g~~~~~~~~~~~~~-i~~v~~a~~pv~vKvi~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg 154 (225)
T 1mzh_A 85 QELDI-----VWNLSAFKSEKYDFVVEE-LKEIFRETPSAVHKVIVET----PYLNEEEIKKAVEICIEAGADFIKTSTG 154 (225)
T ss_dssp SEEEE-----ECCHHHHHTTCHHHHHHH-HHHHHHTCTTSEEEEECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred CEEEE-----EecHHHHhcCChHHHHHH-HHHHHHHhcCceEEEEEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCC
Confidence 66642 111111 112233333 6666665448766224443 3346667766666 45669999944421
Q ss_pred cccCCChHHHHHHHHH
Q 036921 350 TLRGLYPVETISIVGK 365 (527)
Q Consensus 350 ta~G~yP~e~V~~~~~ 365 (527)
-..|.+-.+.++.|.+
T Consensus 155 ~~~gga~~~~i~~v~~ 170 (225)
T 1mzh_A 155 FAPRGTTLEEVRLIKS 170 (225)
T ss_dssp CSSSCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH
Confidence 1123344566666554
No 126
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=70.51 E-value=17 Score=34.44 Aligned_cols=132 Identities=16% Similarity=0.045 Sum_probs=65.4
Q ss_pred HHHHhhcccccccEEEecC--CCCHHHHHHHHHHHHHcCCCCCc--eEEEe-------ecCh--------HhHhhHHHHH
Q 036921 210 EVISSWGVQNKIDFLSLSY--TRHAEDVRQAREYLSKLGDLSQT--QIFAK-------IENI--------EGLTHFDEIL 270 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sf--V~s~~dv~~lr~~l~~~~~~~~~--~IiaK-------IEt~--------~av~nldeI~ 270 (527)
+++. .+++.|+|+|.+.- ..+++.+.++.+.++. ..+ .+=++ +++. ..++.+.++.
T Consensus 87 ~~~~-~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~----~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 161 (253)
T 1thf_D 87 ETAS-ELILRGADKVSINTAAVENPSLITQIAQTFGS----QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 161 (253)
T ss_dssp HHHH-HHHHTTCSEEEESHHHHHCTHHHHHHHHHHCG----GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred HHHH-HHHHcCCCEEEEChHHHhChHHHHHHHHHcCC----CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHH
Confidence 4454 34678999998864 2344445555444321 111 11121 2211 2344455555
Q ss_pred Hh-CCEEEEe-CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 271 QA-ADGIILS-RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 271 ~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+. .|.|++. +.-=+...++ .+. .-+++ ++..+.|++. ..+ -+.. |+..+...|+|+++..
T Consensus 162 ~~G~~~i~~~~~~~~g~~~g~-~~~-~~~~l---~~~~~ipvia~GGI---------~~~~---d~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 162 KRGAGEILLTSIDRDGTKSGY-DTE-MIRFV---RPLTTLPIIASGGA---------GKME---HFLEAFLAGADAALAA 224 (253)
T ss_dssp HTTCSEEEEEETTTTTSCSCC-CHH-HHHHH---GGGCCSCEEEESCC---------CSHH---HHHHHHHTTCSEEEES
T ss_pred HCCCCEEEEEeccCCCCCCCC-CHH-HHHHH---HHhcCCCEEEECCC---------CCHH---HHHHHHHcCChHHHHH
Confidence 55 5888874 2111111222 111 11222 2345899998 653 3334 4455556799999987
Q ss_pred CccccCC-ChHHHHHHH
Q 036921 348 AETLRGL-YPVETISIV 363 (527)
Q Consensus 348 ~Eta~G~-yP~e~V~~~ 363 (527)
.---.+. -|.++++.+
T Consensus 225 sal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 225 SVFHFREIDVRELKEYL 241 (253)
T ss_dssp HHHHTTCSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 4433344 455655554
No 127
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=69.83 E-value=43 Score=31.55 Aligned_cols=133 Identities=9% Similarity=0.011 Sum_probs=79.2
Q ss_pred ccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCC----cCCCCchh
Q 036921 217 VQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNL----GIDLPPEK 291 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDL----g~e~~~~~ 291 (527)
.+.|+|++.+--.-..+.++++++.+.+.|......-+..+-+. ..+.+.++++. .|-+.+.++-+ |+-.+.++
T Consensus 79 ~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e 157 (221)
T 3exr_A 79 AVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKD 157 (221)
T ss_dssp HTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHH
T ss_pred HHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHH
Confidence 57999999997777777799999988876510122333444422 45556677663 46666655544 23333344
Q ss_pred HHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 292 VFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
+..+.+. | ..+.++.+ -.+ +|. ++..++..|+|.++...--.....|.++++.+.+.++
T Consensus 158 ~~~ir~~----~-~~~~~i~v~gGI--------~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 158 LNKVKKL----I-EMGFRVSVTGGL--------SVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHH----H-HHTCEEEEESSC--------CGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHh----h-cCCceEEEECCC--------CHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 4333222 2 34556555 332 232 2235677899999987544445679998887776553
No 128
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.93 E-value=44 Score=30.65 Aligned_cols=125 Identities=13% Similarity=0.085 Sum_probs=66.4
Q ss_pred HHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCch
Q 036921 211 VISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPE 290 (527)
Q Consensus 211 di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~ 290 (527)
++. .+++.|+|+|.++. ...+ + .+.....| ..++.-+.|++-+.. ....-+|.|.+-+++ ..+++
T Consensus 72 ~i~-~a~~~Gad~V~~~~-~~~~-~---~~~~~~~g----~~~~~g~~t~~e~~~--a~~~G~d~v~v~~t~---~~g~~ 136 (212)
T 2v82_A 72 QVD-ALARMGCQLIVTPN-IHSE-V---IRRAVGYG----MTVCPGCATATEAFT--ALEAGAQALKIFPSS---AFGPQ 136 (212)
T ss_dssp HHH-HHHHTTCCEEECSS-CCHH-H---HHHHHHTT----CEEECEECSHHHHHH--HHHTTCSEEEETTHH---HHCHH
T ss_pred HHH-HHHHcCCCEEEeCC-CCHH-H---HHHHHHcC----CCEEeecCCHHHHHH--HHHCCCCEEEEecCC---CCCHH
Confidence 454 45899999998664 2222 2 23333444 233333444443211 112235998874432 11222
Q ss_pred hHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccC----CChHHHHHHH
Q 036921 291 KVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRG----LYPVETISIV 363 (527)
Q Consensus 291 ~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G----~yP~e~V~~~ 363 (527)
.+ -+.++.. +.|++. ..+ +. .++..+...|+|++....--..+ ..|.+.++.+
T Consensus 137 ~~-------~~l~~~~~~~ipvia~GGI----------~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l 196 (212)
T 2v82_A 137 YI-------KALKAVLPSDIAVFAVGGV----------TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAF 196 (212)
T ss_dssp HH-------HHHHTTSCTTCEEEEESSC----------CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHH
T ss_pred HH-------HHHHHhccCCCeEEEeCCC----------CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHH
Confidence 22 2222333 388887 553 21 35566667799999987544333 3577777777
Q ss_pred HHHHHHH
Q 036921 364 GKICAEA 370 (527)
Q Consensus 364 ~~i~~~a 370 (527)
.+.+.++
T Consensus 197 ~~~~~~~ 203 (212)
T 2v82_A 197 VKAYREA 203 (212)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766554
No 129
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=68.78 E-value=39 Score=34.59 Aligned_cols=119 Identities=14% Similarity=0.153 Sum_probs=66.8
Q ss_pred cccccEEEecC----------CCCHHHHHHHHHHHHHc-C---CCCCceEEEeecChHhHhhHHHHHHh-----CCEEEE
Q 036921 218 QNKIDFLSLSY----------TRHAEDVRQAREYLSKL-G---DLSQTQIFAKIENIEGLTHFDEILQA-----ADGIIL 278 (527)
Q Consensus 218 ~~g~d~I~~sf----------V~s~~dv~~lr~~l~~~-~---~~~~~~IiaKIEt~~av~nldeI~~~-----sDgImI 278 (527)
..++|+|-+.+ .++++.+.++.+.+.+. . ...+.+|+.||=--...+++.+|++. +|||.+
T Consensus 174 ~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v 253 (367)
T 3zwt_A 174 GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIV 253 (367)
T ss_dssp GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34589888753 34566666665555432 0 00357899999321122355556554 499987
Q ss_pred e-----CCC-----CcCCCC----chhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCC
Q 036921 279 S-----RGN-----LGIDLP----PEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGS 341 (527)
Q Consensus 279 a-----RgD-----Lg~e~~----~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~ 341 (527)
- |-+ ++.+.+ ....+...+.+-+..++. ..|+|. ..+- ...|+..++..||
T Consensus 254 ~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~------------s~~da~~~l~~GA 321 (367)
T 3zwt_A 254 TNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS------------SGQDALEKIRAGA 321 (367)
T ss_dssp CCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC------------SHHHHHHHHHHTC
T ss_pred eCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC------------CHHHHHHHHHcCC
Confidence 4 211 111121 112233334444444445 689998 6642 3457778888899
Q ss_pred cEEEeCC
Q 036921 342 DAILLGA 348 (527)
Q Consensus 342 D~imLs~ 348 (527)
|+||+..
T Consensus 322 d~V~vgr 328 (367)
T 3zwt_A 322 SLVQLYT 328 (367)
T ss_dssp SEEEESH
T ss_pred CEEEECH
Confidence 9999983
No 130
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=68.68 E-value=30 Score=33.19 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=72.3
Q ss_pred hhcccccccEEEecCCC----------CHHHHHHHHHHHHHcCCCCCceEEEe---------ecC------hHhHhhHHH
Q 036921 214 SWGVQNKIDFLSLSYTR----------HAEDVRQAREYLSKLGDLSQTQIFAK---------IEN------IEGLTHFDE 268 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~----------s~~dv~~lr~~l~~~~~~~~~~IiaK---------IEt------~~av~nlde 268 (527)
+.+.+.|+|+|=+.+-. +.+++.++++.+.+.| +.+.+- +-+ .++++.+..
T Consensus 37 ~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g----l~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 112 (295)
T 3cqj_A 37 QLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETG----VRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRK 112 (295)
T ss_dssp HHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHC----CEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcC----CeEEEEecCcccCCCCCCCCHHHHHHHHHHHHH
Confidence 36678999999887654 5688999999999887 333221 111 123455555
Q ss_pred HHHhC-----CEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH
Q 036921 269 ILQAA-----DGIILSRGNLGIDLP----PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL 338 (527)
Q Consensus 269 I~~~s-----DgImIaRgDLg~e~~----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~ 338 (527)
.++.+ +.|.+..++-..+.+ ++.+...-+++...|+++|..+.+ +. -.+...|..++.++...+
T Consensus 113 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~-----~~~~~~~~~~~~~l~~~v- 186 (295)
T 3cqj_A 113 AIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIM-----DYPLMNSISKALGYAHYL- 186 (295)
T ss_dssp HHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECC-----SSGGGCSHHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeC-----CCcccCCHHHHHHHHHhc-
Confidence 55543 566665333211111 234455556777788888877665 42 222344556666666655
Q ss_pred hCCcEEEeCCcc
Q 036921 339 DGSDAILLGAET 350 (527)
Q Consensus 339 ~g~D~imLs~Et 350 (527)
+.+.+-+.-+|
T Consensus 187 -~~~~vg~~~D~ 197 (295)
T 3cqj_A 187 -NNPWFQLYPDI 197 (295)
T ss_dssp -CCTTEEEECBH
T ss_pred -CCCCeEEEecc
Confidence 44444444444
No 131
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=68.44 E-value=36 Score=33.40 Aligned_cols=123 Identities=11% Similarity=0.045 Sum_probs=75.0
Q ss_pred hcccccccEEEecC-CCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh----CCEEEEeCCCCcC-CCC
Q 036921 215 WGVQNKIDFLSLSY-TRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA----ADGIILSRGNLGI-DLP 288 (527)
Q Consensus 215 ~~~~~g~d~I~~sf-V~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~----sDgImIaRgDLg~-e~~ 288 (527)
.+...|+|.|.+-- ..+.+++.++.+...+.| +.+++-+-| .+|+..+ +|-|-+..-||.. +..
T Consensus 137 ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG----l~~lvevh~------~eEl~~A~~~ga~iIGinnr~l~t~~~d 206 (272)
T 3tsm_A 137 EARSWGADCILIIMASVDDDLAKELEDTAFALG----MDALIEVHD------EAEMERALKLSSRLLGVNNRNLRSFEVN 206 (272)
T ss_dssp HHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT----CEEEEEECS------HHHHHHHTTSCCSEEEEECBCTTTCCBC
T ss_pred HHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC----CeEEEEeCC------HHHHHHHHhcCCCEEEECCCCCccCCCC
Confidence 35789999977653 446677888887777665 456666644 4444333 4888777556542 223
Q ss_pred chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHH
Q 036921 289 PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVG 364 (527)
Q Consensus 289 ~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~ 364 (527)
++... +++.... .++|++. .. .-|+. |+..+...|+|+++...--.....|.++++-|.
T Consensus 207 l~~~~----~L~~~ip-~~~~vIaesG---------I~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 207 LAVSE----RLAKMAP-SDRLLVGESG---------IFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp THHHH----HHHHHSC-TTSEEEEESS---------CCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred hHHHH----HHHHhCC-CCCcEEEECC---------CCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 33322 2222221 2678886 54 34555 555666679999998765556677877776553
No 132
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=67.12 E-value=63 Score=34.30 Aligned_cols=119 Identities=18% Similarity=0.111 Sum_probs=71.4
Q ss_pred HHHHhhcccccccEEEecCC--CCHHHHHHHHHHHHHcCCCCC-ce-EEEeecChHhHhhHHHHHHhCCEEEEeCCCCcC
Q 036921 210 EVISSWGVQNKIDFLSLSYT--RHAEDVRQAREYLSKLGDLSQ-TQ-IFAKIENIEGLTHFDEILQAADGIILSRGNLGI 285 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV--~s~~dv~~lr~~l~~~~~~~~-~~-IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~ 285 (527)
+.+. ...+.|++.+.+..- .+...+..+ +.+.+.. .+ +. ++.-+.+.+..+.+.+ .-+|+|.+|.|-=+.
T Consensus 245 e~~~-~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~--~~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~~ 318 (503)
T 1me8_A 245 ERVP-ALVEAGADVLCIDSSDGFSEWQKITI-GWIREKY--GDKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSI 318 (503)
T ss_dssp HHHH-HHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHH--GGGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred HHHH-HHHhhhccceEEecccCcccchhhHH-HHHHHhC--CCCceEeeccccCHHHHHHHHH--hCCCeEEecccCCcC
Confidence 3343 457889998877322 222222222 3333321 22 44 4567888887765543 247999986533111
Q ss_pred -------CCCchhHHHHHHHHHHHHHHc------CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 286 -------DLPPEKVFLFQKAALYKCNMA------GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 286 -------e~~~~~v~~~qk~Ii~~c~~~------gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
..+.+ -..+...+.++|++. +.|+|. ..+. --.|++.|+..|||++|+.
T Consensus 319 ~~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------------~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 319 CITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV------------YDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp CCSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 11222 234556677777777 899998 6542 3478899999999999996
No 133
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=67.00 E-value=9.7 Score=40.66 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=42.1
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 29 MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
+..+.+.+|......+.++.++++|+++.=||++||......++++.+|+.
T Consensus 243 rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 243 QLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 445667778777778999999999999999999999987777777777764
No 134
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=66.09 E-value=77 Score=29.08 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=65.6
Q ss_pred cccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHH-HhCCEEEEeCC---CC----cCCC
Q 036921 216 GVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEIL-QAADGIILSRG---NL----GIDL 287 (527)
Q Consensus 216 ~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~-~~sDgImIaRg---DL----g~e~ 287 (527)
+.+.|+|+|.++... .++.++++.+ | . ..+-.-..|.+-+ .+.. .-+|.+.+++. .- +...
T Consensus 90 a~~~gad~v~l~~~~--~~~~~~~~~~---g--~-~~~~~s~~t~~e~---~~a~~~g~d~v~~~~v~~t~~~~~~~~~~ 158 (227)
T 2tps_A 90 ALNLKADGIHIGQED--ANAKEVRAAI---G--D-MILGVSAHTMSEV---KQAEEDGADYVGLGPIYPTETKKDTRAVQ 158 (227)
T ss_dssp HHHHTCSEEEECTTS--SCHHHHHHHH---T--T-SEEEEEECSHHHH---HHHHHHTCSEEEECCSSCCCSSSSCCCCC
T ss_pred HHHcCCCEEEECCCc--cCHHHHHHhc---C--C-cEEEEecCCHHHH---HHHHhCCCCEEEECCCcCCCCCCCCCCcc
Confidence 357788998886432 2355555433 3 2 2222223444322 2222 23699997431 11 2233
Q ss_pred CchhHHHHHHHHHHHHHHcC-CcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 288 PPEKVFLFQKAALYKCNMAG-KPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 288 ~~~~v~~~qk~Ii~~c~~~g-Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
+++.+..+ ++... +|++. ..+ .| .++..+...|+|++.+.+--...+.|.+.++-+.+
T Consensus 159 ~~~~l~~~-------~~~~~~~pvia~GGI--------~~-----~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 159 GVSLIEAV-------RRQGISIPIVGIGGI--------TI-----DNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp TTHHHHHH-------HHTTCCCCEEEESSC--------CT-----TTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CHHHHHHH-------HHhCCCCCEEEEcCC--------CH-----HHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 44443322 22335 89988 543 22 23455566799999998655555678777776665
Q ss_pred HHHH
Q 036921 366 ICAE 369 (527)
Q Consensus 366 i~~~ 369 (527)
.+++
T Consensus 219 ~~~~ 222 (227)
T 2tps_A 219 EIQT 222 (227)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 135
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=66.07 E-value=48 Score=31.02 Aligned_cols=131 Identities=14% Similarity=0.109 Sum_probs=75.0
Q ss_pred HHHHHhhcccccccEEEec-----CCCC----HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEE
Q 036921 209 KEVISSWGVQNKIDFLSLS-----YTRH----AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIIL 278 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~s-----fV~s----~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImI 278 (527)
.++++ .+.+.|+|++-+= |+.. .+.++++++.. . ....+--++.+++ +.++..+++ +|++.+
T Consensus 22 ~~~i~-~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~--~~~~v~lmv~d~~--~~i~~~~~agad~v~v 93 (228)
T 1h1y_A 22 AAEAD-RMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---K--AYLDCHLMVTNPS--DYVEPLAKAGASGFTF 93 (228)
T ss_dssp HHHHH-HHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---C--SEEEEEEESSCGG--GGHHHHHHHTCSEEEE
T ss_pred HHHHH-HHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---C--CcEEEEEEecCHH--HHHHHHHHcCCCEEEE
Confidence 34554 5578899987555 6665 66666666533 1 2234456777653 347777775 599987
Q ss_pred eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh---CCcEEEeCC-c-c-c
Q 036921 279 SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD---GSDAILLGA-E-T-L 351 (527)
Q Consensus 279 aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~---g~D~imLs~-E-t-a 351 (527)
--+.. + + ...+.++.++++|+.+++ .. | .|..|. ...+.. ++|.+++.+ + + .
T Consensus 94 H~~~~--~---~----~~~~~~~~i~~~g~~igv~~~--------p-~t~~e~---~~~~~~~~~~~d~vl~~sv~pg~~ 152 (228)
T 1h1y_A 94 HIEVS--R---D----NWQELIQSIKAKGMRPGVSLR--------P-GTPVEE---VFPLVEAENPVELVLVMTVEPGFG 152 (228)
T ss_dssp EGGGC--T---T----THHHHHHHHHHTTCEEEEEEC--------T-TSCGGG---GHHHHHSSSCCSEEEEESSCTTCS
T ss_pred CCCCc--c---c----HHHHHHHHHHHcCCCEEEEEe--------C-CCCHHH---HHHHHhcCCCCCEEEEEeecCCCC
Confidence 52211 1 1 114667788889999998 53 1 122222 234556 999998832 1 1 1
Q ss_pred cCCChHHHHHHHHHHHH
Q 036921 352 RGLYPVETISIVGKICA 368 (527)
Q Consensus 352 ~G~yP~e~V~~~~~i~~ 368 (527)
--+|+-..++.++++.+
T Consensus 153 g~~~~~~~l~~i~~~~~ 169 (228)
T 1h1y_A 153 GQKFMPEMMEKVRALRK 169 (228)
T ss_dssp SCCCCGGGHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHH
Confidence 12466666666555543
No 136
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=65.60 E-value=31 Score=33.89 Aligned_cols=104 Identities=16% Similarity=0.167 Sum_probs=62.8
Q ss_pred hhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee---------cChHhHhhHHHHHHhCCEEE
Q 036921 207 KDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI---------ENIEGLTHFDEILQAADGII 277 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI---------Et~~av~nldeI~~~sDgIm 277 (527)
.|++.+.+.+.+.|++.++++- -+.++.+.+.++...... ....+++-+ .+.+.++.+++.++....+-
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~-~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vva 94 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDA-SGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRA 94 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCT-TSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCC-CCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEE
Confidence 4566555577899999888874 467777777776655420 112244333 12234566667665555565
Q ss_pred EeCCCCcCCCCch-----hHHHHHHHHHHHHHHcCCcEEE-ec
Q 036921 278 LSRGNLGIDLPPE-----KVFLFQKAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 278 IaRgDLg~e~~~~-----~v~~~qk~Ii~~c~~~gKpvi~-Tq 314 (527)
| |..|++.... .=..+-++.++.|++.|+|+++ +.
T Consensus 95 I--GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 95 V--GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp E--EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred E--EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 6 4555554321 1122345778889999999999 75
No 137
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=65.56 E-value=17 Score=35.73 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=53.8
Q ss_pred hHHHHHhhcccccccEE--EecC---CCCHHHHHH-----------------HHHHHHHcCCCCCceEEEeec-Ch---H
Q 036921 208 DKEVISSWGVQNKIDFL--SLSY---TRHAEDVRQ-----------------AREYLSKLGDLSQTQIFAKIE-NI---E 261 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I--~~sf---V~s~~dv~~-----------------lr~~l~~~~~~~~~~IiaKIE-t~---~ 261 (527)
-.+.++ ...+.|+|+| .+|| +-+..-|+. +.+.+++.+ .+++++.+.- ++ -
T Consensus 34 ~~~~~~-~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~--~~~Pivlm~Y~npv~~~ 110 (267)
T 3vnd_A 34 SLKIIQ-TLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQH--PDMPIGLLLYANLVFAN 110 (267)
T ss_dssp HHHHHH-HHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--TTCCEEEEECHHHHHHH
T ss_pred HHHHHH-HHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCCCEEEEecCcHHHHh
Confidence 345554 4467899975 5566 333333332 222333333 4567877765 43 3
Q ss_pred hHhhHHHHH-Hh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 262 GLTHFDEIL-QA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 262 av~nldeI~-~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
|++++-+=+ ++ .||+++. ++|+++ ..+.+..|+++|...+.
T Consensus 111 g~e~f~~~~~~aGvdgvii~------Dlp~ee----~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIA------DVPVEE----SAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEEC
T ss_pred hHHHHHHHHHHcCCCEEEeC------CCCHhh----HHHHHHHHHHcCCeEEE
Confidence 556553333 33 4999994 455555 56788999999987664
No 138
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=65.18 E-value=10 Score=39.04 Aligned_cols=49 Identities=20% Similarity=0.333 Sum_probs=38.8
Q ss_pred EEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 31 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 31 kIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.|+.+|+.
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~ 146 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 146 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHh
Confidence 3455566555678999999999999999999999888776666666653
No 139
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=64.86 E-value=34 Score=32.42 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=69.8
Q ss_pred ccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhH----HHHHH---h--CCEEEEeCCCCcCCC
Q 036921 217 VQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHF----DEILQ---A--ADGIILSRGNLGIDL 287 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nl----deI~~---~--sDgImIaRgDLg~e~ 287 (527)
.+.|+|+|.+.-.-..+.++.+.+.+.+.| ..+.+++..-++.+.+.+ +.+++ . .||++++. .
T Consensus 88 ~~~gad~vtvh~~~G~~~l~~~~~~~~~~g--~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------t 159 (228)
T 3m47_A 88 FKAGADAIIVHGFPGADSVRACLNVAEEMG--REVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------T 159 (228)
T ss_dssp HHTTCSEEEEESTTCHHHHHHHHHHHHHHT--CEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------S
T ss_pred HhCCCCEEEEeccCCHHHHHHHHHHHHhcC--CCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------C
Confidence 678999999976556677888888887766 555566677665543322 22332 2 27766542 1
Q ss_pred CchhHHHHHHHHHHHHHHcCC-cEEEe-cchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 288 PPEKVFLFQKAALYKCNMAGK-PAVVT-RVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 288 ~~~~v~~~qk~Ii~~c~~~gK-pvi~T-q~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
.++++.. |-+ ..|. ..++| .+ |++-.+. .++..|+|.+....--.....|.++++.+.+
T Consensus 160 ~~~e~~~----ir~---~~~~~~~iv~PGI-----------~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 160 RPERLSR----LRE---IIGQDSFLISPGV-----------GAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp CHHHHHH----HHH---HHCSSSEEEECC---------------------CGGGTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred ChHHHHH----HHH---hcCCCCEEEecCc-----------CcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 1223221 212 2243 22232 11 3333456 7788999999887665566789888877766
Q ss_pred HHH
Q 036921 366 ICA 368 (527)
Q Consensus 366 i~~ 368 (527)
.++
T Consensus 221 ~~~ 223 (228)
T 3m47_A 221 SIK 223 (228)
T ss_dssp HC-
T ss_pred HHH
Confidence 543
No 140
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=64.82 E-value=34 Score=34.93 Aligned_cols=115 Identities=20% Similarity=0.167 Sum_probs=64.8
Q ss_pred cccccEEEecCC-----------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH---h---CCEEEEe-
Q 036921 218 QNKIDFLSLSYT-----------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ---A---ADGIILS- 279 (527)
Q Consensus 218 ~~g~d~I~~sfV-----------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~---~---sDgImIa- 279 (527)
+.|+|+|-+.+= ++++.+.++.+.+.+. .+++|++||=----.+++.++++ . .|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~---~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~N 229 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV---YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCIN 229 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH---CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh---hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEec
Confidence 357899887643 4566777776666654 35789999943222333444443 1 5777641
Q ss_pred ---CC---CC---------cCC---CCchhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH
Q 036921 280 ---RG---NL---------GID---LPPEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL 338 (527)
Q Consensus 280 ---Rg---DL---------g~e---~~~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~ 338 (527)
+| |+ ... +.-..+..+--+++...+++ ..|+|. ..+- ...|+..++.
T Consensus 230 T~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~------------s~~da~~~l~ 297 (354)
T 4ef8_A 230 SIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY------------TGEDAFLHVL 297 (354)
T ss_dssp CEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC------------SHHHHHHHHH
T ss_pred ccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC------------CHHHHHHHHH
Confidence 11 10 001 11112222223444444443 489887 6542 2357788888
Q ss_pred hCCcEEEeC
Q 036921 339 DGSDAILLG 347 (527)
Q Consensus 339 ~g~D~imLs 347 (527)
.|||+||+.
T Consensus 298 aGAd~V~vg 306 (354)
T 4ef8_A 298 AGASMVQVG 306 (354)
T ss_dssp HTEEEEEEC
T ss_pred cCCCEEEEh
Confidence 999999997
No 141
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=64.73 E-value=13 Score=37.32 Aligned_cols=57 Identities=14% Similarity=0.262 Sum_probs=40.0
Q ss_pred CCCCCCHHHHHHHHHcCCCeEEeecCCCCH----------HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 37 GPKSRSVDVISGCLKAGMSVARFDFSWGNT----------EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 37 Gp~~~~~~~l~~l~~~G~~v~RiN~shg~~----------e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
|+...+.+.|+.|.+.|+|++||-+++... +...+.++++=+.+.+.| +.+++|+-.
T Consensus 39 ~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vildlH~ 105 (345)
T 3ndz_A 39 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHH 105 (345)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCS
T ss_pred CCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCC
Confidence 444457899999999999999999886431 334455555555555555 778899875
No 142
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=64.64 E-value=51 Score=32.61 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=74.3
Q ss_pred ccccccEEEecCCCC--------------HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCC
Q 036921 217 VQNKIDFLSLSYTRH--------------AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGN 282 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s--------------~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgD 282 (527)
.+.+..+|+-+..+. .+-++.++++..+.| +.+++-+-+.+.++-+ .+..|.+-||-++
T Consensus 48 ~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~G----lp~~Tev~d~~~v~~l---~~~vd~lqIgA~~ 120 (285)
T 3sz8_A 48 RKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFG----VPVITDVHEAEQAAPV---AEIADVLQVPAFL 120 (285)
T ss_dssp HHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHC----CCEEEECCSGGGHHHH---HTTCSEEEECGGG
T ss_pred HhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC----CeEEEEeCCHHHHHHH---HHhCCEEEECccc
Confidence 345688888764442 467888888887765 7899988887777554 4558999999666
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEeCC
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILLGA 348 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imLs~ 348 (527)
+- ..+ +++++.+.||||++ |.|. -|-.|+...+..+. .|.+=++|..
T Consensus 121 ~~------n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 121 AR------QTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCE 169 (285)
T ss_dssp TT------CHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEE
T ss_pred cC------CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEe
Confidence 53 222 56666689999999 8752 35677777777664 4887777753
No 143
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=64.62 E-value=10 Score=40.72 Aligned_cols=54 Identities=13% Similarity=0.204 Sum_probs=44.9
Q ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 26 FPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 26 ~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
...+..+-+.+|+..+..+.++.|+++|+++.=+|.+||..+...++++.+|+.
T Consensus 241 ~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~ 294 (511)
T 3usb_A 241 KQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK 294 (511)
T ss_dssp TTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred hccceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh
Confidence 344567778888887888999999999999999999999888777777777753
No 144
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=63.86 E-value=16 Score=35.92 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=64.8
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCch-hHH
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPE-KVF 293 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~-~v~ 293 (527)
.+.+.|+|+++++-+-. +++.++.+.+.+.|. ..+.-+--....+.+++|.+.+.|.+..-.=.| -.|.. ..+
T Consensus 114 ~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl----~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G-~TG~~~~~~ 187 (271)
T 1ujp_A 114 LFKQAGATGVILPDLPP-DEDPGLVRLAQEIGL----ETVFLLAPTSTDARIATVVRHATGFVYAVSVTG-VTGMRERLP 187 (271)
T ss_dssp HHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTC----EEECEECTTCCHHHHHHHHTTCCSCEEEECC------------
T ss_pred HHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCC----ceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCc-ccCCCCCCC
Confidence 35678999999997654 778888888887762 233333222445688999998865543211111 11211 111
Q ss_pred HHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 294 LFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 294 ~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.-....++..+++ +.|+++ ..+ =|...+ .. + .|+|+++..
T Consensus 188 ~~~~~~v~~vr~~~~~Pv~vGfGI---------~t~e~a---~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 188 EEVKDLVRRIKARTALPVAVGFGV---------SGKATA---AQ-A-AVADGVVVG 229 (271)
T ss_dssp -CCHHHHHHHHTTCCSCEEEESCC---------CSHHHH---HH-H-TTSSEEEEC
T ss_pred ccHHHHHHHHHhhcCCCEEEEcCC---------CCHHHH---HH-h-cCCCEEEEC
Confidence 1113455566655 789998 663 234433 33 3 799999975
No 145
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=63.84 E-value=54 Score=32.71 Aligned_cols=104 Identities=12% Similarity=0.071 Sum_probs=72.9
Q ss_pred cccccEEEecCCCC--------------HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCC
Q 036921 218 QNKIDFLSLSYTRH--------------AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNL 283 (527)
Q Consensus 218 ~~g~d~I~~sfV~s--------------~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDL 283 (527)
+.++.+|+-+..+. .+-++.++++..+.| +.+++-+-+.+.++-+ .+..|.+-||-+++
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~G----Lpv~Tev~D~~~v~~l---~~~vd~lkIgA~~~ 142 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYG----FPVLTDIHTEEQCAAV---APVVDVLQIPAFLC 142 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHC----CCEEEECCSHHHHHHH---TTTCSEEEECGGGT
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC----CeEEEEeCCHHHHHHH---HhhCCEEEECcccc
Confidence 45678888775542 366778888887765 7899988887777554 44589999986655
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEeC
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILLG 347 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imLs 347 (527)
- ..+ +++++.+.||||++ |.| .-|-.|+...+..+. .|.+=++|.
T Consensus 143 ~------n~~-----LLr~va~~gkPVilK~Gm--------s~t~~ei~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 143 R------QTD-----LLIAAARTGRVVNVKKGQ--------FLAPWDMKNVLAKITESGNPNVLAT 189 (298)
T ss_dssp T------CHH-----HHHHHHHTTSEEEEECCT--------TCCGGGHHHHHHHHHTTTCCCEEEE
T ss_pred C------CHH-----HHHHHHccCCcEEEeCCC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 3 333 44556688999999 875 236677777777665 477767775
No 146
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=63.52 E-value=11 Score=40.14 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=44.1
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 27 PAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 27 ~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
..+..+-+.+|...++.+.++.|+++|++++=||.+||..+...++++.+|+.
T Consensus 215 ~grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 215 QGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp TSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred cCcceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 34566667788877889999999999999999999999988777777777764
No 147
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=63.43 E-value=27 Score=33.21 Aligned_cols=38 Identities=16% Similarity=-0.002 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCC------cEEEecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 297 KAALYKCNMAGK------PAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 297 k~Ii~~c~~~gK------pvi~Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
..+++.|+++|. |++= --+-.+++..|...|+|.+-+.
T Consensus 96 ~evi~~~~~~~v~~~~~~~~~P-------------G~~TptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 96 PELIEKAKQVKLDGQWQGVFLP-------------GVATASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEE-------------EECSHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHHcCCCccCCCeEeC-------------CCCCHHHHHHHHHcCCCEEEEC
Confidence 478999999999 8874 1122356688899999999764
No 148
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=62.97 E-value=1.2e+02 Score=29.72 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=82.6
Q ss_pred CHhhHHHHHhhccc--ccccEEEecCC-------CCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCC
Q 036921 205 SDKDKEVISSWGVQ--NKIDFLSLSYT-------RHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAAD 274 (527)
Q Consensus 205 t~~D~~di~~~~~~--~g~d~I~~sfV-------~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sD 274 (527)
|.+|.-.+.+.+.+ .|-+||=+--+ -+.....+.-+.|.+ ....++. ...++.--..+++. -+|
T Consensus 85 ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~----~Gf~Vlpy~~dd~~~akrl~~~--G~~ 158 (265)
T 1wv2_A 85 DAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVK----DGFDVMVYTSDDPIIARQLAEI--GCI 158 (265)
T ss_dssp SHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHT----TTCEEEEEECSCHHHHHHHHHS--CCS
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHH----CCCEEEEEeCCCHHHHHHHHHh--CCC
Confidence 55554444334444 46778777766 233333323333333 3356664 55554433333322 258
Q ss_pred EEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccC
Q 036921 275 GIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRG 353 (527)
Q Consensus 275 gImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G 353 (527)
.+|.-....|...|+.+ +..-+.|.+ ..+.|||. ..+ -|. +|++.++..|+|+|++.+--+.+
T Consensus 159 aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eGGI---------~TP---sDAa~AmeLGAdgVlVgSAI~~a 222 (265)
T 1wv2_A 159 AVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDAGV---------GTA---SDAAIAMELGCEAVLMNTAIAHA 222 (265)
T ss_dssp EEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESCC---------CSH---HHHHHHHHHTCSEEEESHHHHTS
T ss_pred EEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeCCC---------CCH---HHHHHHHHcCCCEEEEChHHhCC
Confidence 88873334555555545 333355544 46899998 553 222 57789999999999998666678
Q ss_pred CChHHHHHHHHHHHH
Q 036921 354 LYPVETISIVGKICA 368 (527)
Q Consensus 354 ~yP~e~V~~~~~i~~ 368 (527)
+.|.+-.+.+..-++
T Consensus 223 ~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 223 KDPVMMAEAMKHAIV 237 (265)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 899877776666543
No 149
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=62.35 E-value=12 Score=36.26 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=39.0
Q ss_pred CCCHHHHHHHH-HcCCCeEEeecCCC---------CHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 40 SRSVDVISGCL-KAGMSVARFDFSWG---------NTEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 40 ~~~~~~l~~l~-~~G~~v~RiN~shg---------~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
..+.+.++.|. +.|+|++|+-++.. +++...+.++.+=+.+.+.| +.+++|+-+
T Consensus 38 ~~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G--i~vild~h~ 101 (293)
T 1tvn_A 38 FYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED--MYVIIDFHS 101 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 34678899999 49999999988762 33556666666666667777 566788764
No 150
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=62.03 E-value=44 Score=35.01 Aligned_cols=122 Identities=10% Similarity=0.102 Sum_probs=70.8
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhcc
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVF 374 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~ 374 (527)
=.-+...|+..|.++.+ - |..+....+...-..|++.+....+. . --++++...+++++-+..+
T Consensus 187 G~AlA~aAa~~Gl~~~Ivm-----------P~~~s~~k~~~~r~~GAeVv~v~~~~---~-~~~a~~~a~el~~~~~~~~ 251 (430)
T 4aec_A 187 GIGLAFIAASRGYRLILTM-----------PASMSMERRVLLKAFGAELVLTDPAK---G-MTGAVQKAEEILKNTPDAY 251 (430)
T ss_dssp HHHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHhCCEEEEEE-----------cCCCCHHHHHHHHHCCCEEEEECCCC---C-hHHHHHHHHHHHHhcCCcE
Confidence 34566779999999886 2 22223344455556799988775331 1 2456665555544322221
Q ss_pred chhhhhhhhhcccCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 375 NQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKV--KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
+. ..|. .|..+..-....+.++.+++ +.+.||+..-+|.+..-+++ ..|.+.|+++-+
T Consensus 252 ~i-~~~~-------np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep 315 (430)
T 4aec_A 252 ML-QQFD-------NPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEP 315 (430)
T ss_dssp EC-CTTT-------CTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred Ee-cCCC-------CccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 11 1111 01111112233456677766 47899999999998766655 489999999843
No 151
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=61.93 E-value=7 Score=39.39 Aligned_cols=86 Identities=12% Similarity=0.139 Sum_probs=59.1
Q ss_pred CCceEEEeecC--------hHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhhh
Q 036921 249 SQTQIFAKIEN--------IEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSM 319 (527)
Q Consensus 249 ~~~~IiaKIEt--------~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM 319 (527)
+.++++++.|+ ..-.+.++.++.. ..+|+++|||+- .+.+++.|++.|.|++.|.
T Consensus 48 ~RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~T~----- 111 (314)
T 1ko7_A 48 DRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLITSK----- 111 (314)
T ss_dssp TSEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEECC-----
T ss_pred ccEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEEEC-----
Confidence 45677776665 1222445555543 379999999984 2247899999999988744
Q ss_pred hcCCCCChHhhhhHHHHHHh---------------CCcEEEeCCccccCC
Q 036921 320 TDNLRPTRAEATDVANAVLD---------------GSDAILLGAETLRGL 354 (527)
Q Consensus 320 ~~~p~PtraEv~Dv~nav~~---------------g~D~imLs~Eta~G~ 354 (527)
.+|-.=+..+.+++.. +--++++.|++-.||
T Consensus 112 ----~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 112 ----IATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp ----SCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred ----CchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 3455555666777665 125899999999998
No 152
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=61.89 E-value=38 Score=31.61 Aligned_cols=131 Identities=12% Similarity=0.084 Sum_probs=67.8
Q ss_pred HHHHHhhcccccccEEEecCCCC--H--HHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEE---EEeC-
Q 036921 209 KEVISSWGVQNKIDFLSLSYTRH--A--EDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGI---ILSR- 280 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~s--~--~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgI---mIaR- 280 (527)
.+.+. .+++.|+|+|.+..... + +.+.++.+.+.+.. .+..++..+.|.+-.... ...-+|.| +.+.
T Consensus 91 ~~~i~-~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~--~~~~v~~~~~t~~ea~~a--~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 91 MTEVD-QLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY--PNQLLMADISTFDEGLVA--HQAGIDFVGTTLSGYT 165 (234)
T ss_dssp HHHHH-HHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC--TTCEEEEECSSHHHHHHH--HHTTCSEEECTTTTSS
T ss_pred HHHHH-HHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC--CCCeEEEeCCCHHHHHHH--HHcCCCEEeeeccccC
Confidence 34554 45899999998865422 1 12333333343332 346788877775442211 11225877 2232
Q ss_pred -CCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHH
Q 036921 281 -GNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVE 358 (527)
Q Consensus 281 -gDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e 358 (527)
+..+. .+ ..+..+ +++ ++. +.|++. ..+ -|.. |+..+...|+|++++.. +.=+ |.+
T Consensus 166 ~~~~~~-~~-~~~~~i-~~~---~~~-~ipvia~GGI---------~s~~---~~~~~~~~Gad~v~vGs--al~~-p~~ 223 (234)
T 1yxy_A 166 PYSRQE-AG-PDVALI-EAL---CKA-GIAVIAEGKI---------HSPE---EAKKINDLGVAGIVVGG--AITR-PKE 223 (234)
T ss_dssp TTSCCS-SS-CCHHHH-HHH---HHT-TCCEEEESCC---------CSHH---HHHHHHTTCCSEEEECH--HHHC-HHH
T ss_pred CCCcCC-CC-CCHHHH-HHH---HhC-CCCEEEECCC---------CCHH---HHHHHHHCCCCEEEEch--HHhC-hHH
Confidence 22111 11 122111 222 223 899998 553 2233 45556667999999874 3323 777
Q ss_pred HHHHHHHH
Q 036921 359 TISIVGKI 366 (527)
Q Consensus 359 ~V~~~~~i 366 (527)
+++.+.+.
T Consensus 224 ~~~~l~~~ 231 (234)
T 1yxy_A 224 IAERFIEA 231 (234)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76666543
No 153
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=61.19 E-value=37 Score=34.68 Aligned_cols=89 Identities=22% Similarity=0.214 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE
Q 036921 232 AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV 311 (527)
Q Consensus 232 ~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi 311 (527)
.+.++.++++..+.| +.+++-+-....++-+.+. .|.+-||-+++- +..+++++.+.||||+
T Consensus 156 ~egl~~l~~~~~e~G----l~~~te~~d~~~~~~l~~~---vd~lkIgAr~~~-----------n~~LL~~va~~~kPVi 217 (350)
T 1vr6_A 156 EKGLEYLREAADKYG----MYVVTEALGEDDLPKVAEY---ADIIQIGARNAQ-----------NFRLLSKAGSYNKPVL 217 (350)
T ss_dssp HHHHHHHHHHHHHHT----CEEEEECSSGGGHHHHHHH---CSEEEECGGGTT-----------CHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHHHHcC----CcEEEEeCCHHHHHHHHHh---CCEEEECccccc-----------CHHHHHHHHccCCcEE
Confidence 578888999888766 7899999888888666664 799999866653 2234555557899999
Q ss_pred E-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEe
Q 036921 312 V-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILL 346 (527)
Q Consensus 312 ~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imL 346 (527)
+ |.| ..|-.|+...++++. .|.+-++|
T Consensus 218 lk~G~--------~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 218 LKRGF--------MNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp EECCT--------TCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred EcCCC--------CCCHHHHHHHHHHHHHCCCCeEEE
Confidence 9 775 357788888888664 46644555
No 154
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=61.16 E-value=9 Score=41.49 Aligned_cols=60 Identities=22% Similarity=0.245 Sum_probs=47.3
Q ss_pred cCCCC-CCCCCeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 20 PSKAS-FFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 20 ~~~~~-~~~~~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
|.++. ....+-.+-|.+|-.-++.|-.+.|+++|+|++=|+.+||..+...++++.||+.
T Consensus 259 p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 259 PYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp TTCCBCTTTCCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred CcchhcchhhceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 44443 2334556777788666778899999999999999999999999888888888864
No 155
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=60.98 E-value=75 Score=31.16 Aligned_cols=122 Identities=16% Similarity=0.085 Sum_probs=71.4
Q ss_pred hcccccccEE-Eec-------------CCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH-hCCEEEEe
Q 036921 215 WGVQNKIDFL-SLS-------------YTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ-AADGIILS 279 (527)
Q Consensus 215 ~~~~~g~d~I-~~s-------------fV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~-~sDgImIa 279 (527)
.+.+.|+|+| .+- ..++++.++++++. .+++++.|+=.-. ++..+...+ -+|+|. +
T Consensus 36 ~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-------~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~-~ 106 (305)
T 2nv1_A 36 IAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-------VSIPVMAKARIGH-IVEARVLEAMGVDYID-E 106 (305)
T ss_dssp HHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-------CSSCEEEEECTTC-HHHHHHHHHHTCSEEE-E
T ss_pred HHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-------CCCCEEecccccc-hHHHHHHHHCCCCEEE-E
Confidence 4478999999 542 23356666666542 3467888764310 222222232 259996 4
Q ss_pred CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHH
Q 036921 280 RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVE 358 (527)
Q Consensus 280 RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e 358 (527)
-.++.. +++ .+++. |+..|.|+++ .. + ..+...++..|+|.|.++||+..| -..+
T Consensus 107 ~~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~~~ 162 (305)
T 2nv1_A 107 SEVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NIVE 162 (305)
T ss_dssp CTTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CTHH
T ss_pred eccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-chHH
Confidence 444422 221 12233 5567999888 54 2 224456678899999999998777 4567
Q ss_pred HHHHHHHHHHH
Q 036921 359 TISIVGKICAE 369 (527)
Q Consensus 359 ~V~~~~~i~~~ 369 (527)
++...+.+..+
T Consensus 163 ~~~h~rt~~~~ 173 (305)
T 2nv1_A 163 AVRHMRKVNAQ 173 (305)
T ss_dssp HHHHHHHHHHH
T ss_pred HHhhhhhhhcc
Confidence 76766554333
No 156
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=60.90 E-value=36 Score=31.61 Aligned_cols=68 Identities=18% Similarity=0.256 Sum_probs=37.6
Q ss_pred HhhHHHHHHh-CCEEEEeCCCC---cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH
Q 036921 263 LTHFDEILQA-ADGIILSRGNL---GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 263 v~nldeI~~~-sDgImIaRgDL---g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav 337 (527)
++-+..+.+. +|.|.+..-+. +....++.+ +++ ++..+.|++. ..+ -+ ..|+..+.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i----~~l---~~~~~~pvia~GGi---------~~---~~~~~~~~ 217 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELI----RRV---ADSVRIPVIASGGA---------GR---VEHFYEAA 217 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHH----HHH---HHHCSSCEEEESCC---------CS---HHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHH----HHH---HHhcCCCEEEeCCC---------CC---HHHHHHHH
Confidence 3445555555 69888743332 112222222 222 2335899998 553 22 24556666
Q ss_pred HhCCcEEEeCCc
Q 036921 338 LDGSDAILLGAE 349 (527)
Q Consensus 338 ~~g~D~imLs~E 349 (527)
..|+|++++..-
T Consensus 218 ~~Ga~~v~vgsa 229 (253)
T 1h5y_A 218 AAGADAVLAASL 229 (253)
T ss_dssp HTTCSEEEESHH
T ss_pred HcCCcHHHHHHH
Confidence 779999999743
No 157
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=60.75 E-value=15 Score=39.08 Aligned_cols=55 Identities=13% Similarity=0.239 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHcCCCeEEeecCCCC----------HHHHHHHHHHHHHHHHHcCCceEEEecCCCC
Q 036921 40 SRSVDVISGCLKAGMSVARFDFSWGN----------TEYHQETLENLKAAVKTTKKLCAVMLDTVGP 96 (527)
Q Consensus 40 ~~~~~~l~~l~~~G~~v~RiN~shg~----------~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 96 (527)
..+.+.|+.|.+.|+|++||-+++.. .++..+.++++=+.+.+.| +.+++|+-..
T Consensus 45 ~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~G--i~vildlH~~ 109 (515)
T 3icg_A 45 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLHHE 109 (515)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCSC
T ss_pred cCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 44689999999999999999887532 1333445555444455555 7788898753
No 158
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=60.64 E-value=68 Score=31.44 Aligned_cols=94 Identities=11% Similarity=0.088 Sum_probs=60.9
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +.-|.++=.++-+. .+..+ .+++||+-+ -|.++++......+. +||+|+.+-.
T Consensus 30 ~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 30 NFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD--KRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC--CCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 47789999998874 33344554444443 34444 678999988 356666655555544 5999997655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.|.+++ +.|+++ .
T Consensus 108 y~~-~~~~~l~~~f~~ia~a~---~lPiilYn 135 (292)
T 3daq_A 108 YNK-TNQRGLVKHFEAIADAV---KLPVVLYN 135 (292)
T ss_dssp SSC-CCHHHHHHHHHHHHHHH---CSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 432 34466666666666555 899998 5
No 159
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=60.57 E-value=24 Score=36.48 Aligned_cols=87 Identities=7% Similarity=0.113 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE
Q 036921 233 EDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV 311 (527)
Q Consensus 233 ~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi 311 (527)
++.++++++..+.| +.+++-+=+.++++-++ +. .|.+=||-+|+. +++ +++++.+.|||+|
T Consensus 101 e~~~~L~~~~~~~G----i~~~stpfD~~svd~l~---~~~vd~~KIgS~~~~------N~p-----LL~~va~~gKPVi 162 (385)
T 1vli_A 101 EWILPLLDYCREKQ----VIFLSTVCDEGSADLLQ---STSPSAFKIASYEIN------HLP-----LLKYVARLNRPMI 162 (385)
T ss_dssp GGHHHHHHHHHHTT----CEEECBCCSHHHHHHHH---TTCCSCEEECGGGTT------CHH-----HHHHHHTTCSCEE
T ss_pred HHHHHHHHHHHHcC----CcEEEccCCHHHHHHHH---hcCCCEEEECccccc------CHH-----HHHHHHhcCCeEE
Confidence 44455555554433 44555444444543333 33 588889988875 232 3566677899999
Q ss_pred E-ecchhhhhcCCCCChHhhhhHHHHHHh-CC-cEEEe
Q 036921 312 V-TRVVDSMTDNLRPTRAEATDVANAVLD-GS-DAILL 346 (527)
Q Consensus 312 ~-Tq~LeSM~~~p~PtraEv~Dv~nav~~-g~-D~imL 346 (527)
+ |.| -|-+|+...++++.. |. +.++|
T Consensus 163 LStGm---------aTl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 163 FSTAG---------AEISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp EECTT---------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred EECCC---------CCHHHHHHHHHHHHHCCCCcEEEE
Confidence 9 986 278999988888874 66 55555
No 160
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=60.14 E-value=48 Score=32.88 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=60.7
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +--|.++=.++-+. .+..+ .+++||+-+ -|.++++....-.+. +||+|+-+-.
T Consensus 36 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 36 DFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA--GRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC--CCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 47789999998884 33344444444444 34444 678899887 355666655554444 5999997665
Q ss_pred Cc--CCCCchhHHHHHHHHHHHHHHcCCcEEE-ec
Q 036921 283 LG--IDLPPEKVFLFQKAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 283 Lg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq 314 (527)
.. ...+.+.+...-+.|.+ +.+.|+++ ..
T Consensus 114 y~~~~~~s~~~l~~~f~~va~---a~~lPiilYn~ 145 (309)
T 3fkr_A 114 HGATFRVPEAQIFEFYARVSD---AIAIPIMVQDA 145 (309)
T ss_dssp BTTTBCCCHHHHHHHHHHHHH---HCSSCEEEEEC
T ss_pred CccCCCCCHHHHHHHHHHHHH---hcCCCEEEEeC
Confidence 43 23455666666566554 45899998 54
No 161
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=60.12 E-value=12 Score=38.32 Aligned_cols=46 Identities=20% Similarity=0.308 Sum_probs=36.2
Q ss_pred EEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 32 IVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 32 Ii~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+.
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK 143 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh
Confidence 455556543 8899999999999999999999887777776666654
No 162
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=60.07 E-value=15 Score=35.38 Aligned_cols=146 Identities=16% Similarity=0.064 Sum_probs=85.9
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHH--------HhC
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEIL--------QAA 273 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~--------~~s 273 (527)
|.-|+.|.+.+-+-+.++|+..|+++ +..+..++ .|. + ..++|.+=|=-+.|-...+.-+ .=+
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~--~--~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GA 94 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA--P--SGLAIAAVAGFPSGKHVPGIKATEAELAVAAGA 94 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC--C--TTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc--C--CCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCC
Confidence 56788888776556788999999985 55677777 663 3 4577777675555443322222 124
Q ss_pred CEEEEeCCCCcCCCCc---hhHHHHHH---HHHHHHHHcCCc--EEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcE
Q 036921 274 DGIILSRGNLGIDLPP---EKVFLFQK---AALYKCNMAGKP--AVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDA 343 (527)
Q Consensus 274 DgImIaRgDLg~e~~~---~~v~~~qk---~Ii~~c~~~gKp--vi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~ 343 (527)
|.|=+- +.++. .+...+.+ .+.++|. |+| ||+ |-.|+. ..|..|+..... +...|+|.
T Consensus 95 dEIDmV-----inig~lk~g~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADf 162 (231)
T 3ndo_A 95 TEIDMV-----IDVGAALAGDLDAVSADITAVRKAVR--AATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADF 162 (231)
T ss_dssp SEEEEE-----CCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSE
T ss_pred CEEEEE-----eehHhhhcccHHHHHHHHHHHHHHcc--CCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCE
Confidence 544321 23322 23334444 4455553 444 566 655521 247788877777 66789999
Q ss_pred EEeCCccc-cCCChHHHHHHHHHHHH
Q 036921 344 ILLGAETL-RGLYPVETISIVGKICA 368 (527)
Q Consensus 344 imLs~Eta-~G~yP~e~V~~~~~i~~ 368 (527)
|=-|.==. .|---++.|+.|++.+.
T Consensus 163 VKTSTGf~~~~gAt~edv~lm~~~v~ 188 (231)
T 3ndo_A 163 VKTSTGFHPSGGASVQAVEIMARTVG 188 (231)
T ss_dssp EECCCSCCTTCSCCHHHHHHHHHHHT
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHhC
Confidence 86652111 22334789999998753
No 163
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=59.66 E-value=1.6e+02 Score=30.07 Aligned_cols=164 Identities=13% Similarity=0.136 Sum_probs=101.2
Q ss_pred CcccccCCccccCCCCCHhhHHHHHhhcccccccEEEecC-CCCHHHHHHHHHHHHHcCCCCCceEEEee-cChHhHhhH
Q 036921 189 LFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLSY-TRHAEDVRQAREYLSKLGDLSQTQIFAKI-ENIEGLTHF 266 (527)
Q Consensus 189 ~kgvnlp~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~sf-V~s~~dv~~lr~~l~~~~~~~~~~IiaKI-Et~~av~nl 266 (527)
|-|-.-++. .++..|+..|.+...+.|+|.|=+-| .-++.+.+.++. +.+.+ ....+.+-. .+.+ ++
T Consensus 12 RDG~Q~~~~-----~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~-i~~~~--~~~~v~~~~r~~~~---di 80 (382)
T 2ztj_A 12 REGEQFEKA-----NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEV-LASLG--LKAKVVTHIQCRLD---AA 80 (382)
T ss_dssp TGGGGSTTC-----CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHH-HHTSC--CSSEEEEEEESCHH---HH
T ss_pred CcccCCCCC-----CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHH-HHhcC--CCcEEEEEcccChh---hH
Confidence 445444443 46777787776565678999999966 456666666655 44444 445555543 1222 23
Q ss_pred HHHHHh-CC--EEEEeCCCCcCC---CCchhHHHHHHHHHHHHHHcC--CcEEEecchhhhhcCCCCChHhhhhHHHHHH
Q 036921 267 DEILQA-AD--GIILSRGNLGID---LPPEKVFLFQKAALYKCNMAG--KPAVVTRVVDSMTDNLRPTRAEATDVANAVL 338 (527)
Q Consensus 267 deI~~~-sD--gImIaRgDLg~e---~~~~~v~~~qk~Ii~~c~~~g--Kpvi~Tq~LeSM~~~p~PtraEv~Dv~nav~ 338 (527)
+..++. .| .++++-.|+-.. ...+++....+..++.++++| ..+.+ . +...++-+...+.+++.++.
T Consensus 81 ~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~-~----~ed~~~~~~~~~~~~~~~~~ 155 (382)
T 2ztj_A 81 KVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRF-S----AEDTFRSEEQDLLAVYEAVA 155 (382)
T ss_dssp HHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE-E----ETTTTTSCHHHHHHHHHHHG
T ss_pred HHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE-E----EEeCCCCCHHHHHHHHHHHH
Confidence 433333 25 444555553222 345677777889999999999 55554 1 11334555667788888665
Q ss_pred hCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 339 DGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 339 ~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
+-+|.|.|. +|.=.-.|.++-+.++.+.+.
T Consensus 156 ~~a~~i~l~-DT~G~~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 156 PYVDRVGLA-DTVGVATPRQVYALVREVRRV 185 (382)
T ss_dssp GGCSEEEEE-ETTSCCCHHHHHHHHHHHHHH
T ss_pred HhcCEEEec-CCCCCCCHHHHHHHHHHHHHh
Confidence 559999997 777777899998888887654
No 164
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=59.61 E-value=44 Score=32.64 Aligned_cols=100 Identities=20% Similarity=0.226 Sum_probs=65.3
Q ss_pred cccccccEEEec-----CCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhh---HHHHHHh-CCEEEEeCCCCcCC
Q 036921 216 GVQNKIDFLSLS-----YTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTH---FDEILQA-ADGIILSRGNLGID 286 (527)
Q Consensus 216 ~~~~g~d~I~~s-----fV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~n---ldeI~~~-sDgImIaRgDLg~e 286 (527)
..+.|+++|-+- |=.+.++++++|+. -+++|+.| +.+-+ +++-... +|+|.++-.+|.
T Consensus 81 y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-------v~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~a~l~-- 147 (272)
T 3qja_A 81 YQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-------VSIPVLRK----DFVVQPYQIHEARAHGADMLLLIVAALE-- 147 (272)
T ss_dssp HHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-------CSSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEGGGSC--
T ss_pred HHHcCCCEEEEecChhhcCCCHHHHHHHHHh-------CCCCEEEC----ccccCHHHHHHHHHcCCCEEEEecccCC--
Confidence 367899998763 22356778777764 24567665 23323 3333332 599999767774
Q ss_pred CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 287 LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 287 ~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
. .-.+.++..|++.|..+++ ++ |..|+ ..|...|+|.+-.++
T Consensus 148 --~----~~l~~l~~~a~~lGl~~lvev~-----------t~ee~---~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 148 --Q----SVLVSMLDRTESLGMTALVEVH-----------TEQEA---DRALKAGAKVIGVNA 190 (272)
T ss_dssp --H----HHHHHHHHHHHHTTCEEEEEES-----------SHHHH---HHHHHHTCSEEEEES
T ss_pred --H----HHHHHHHHHHHHCCCcEEEEcC-----------CHHHH---HHHHHCCCCEEEECC
Confidence 2 2346678899999999988 64 33443 445567999998874
No 165
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=59.37 E-value=27 Score=33.39 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=63.6
Q ss_pred ccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecCh----HhHhhHHHHHHh--CCEEEEeCCCCcCCCCchhHHH
Q 036921 221 IDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENI----EGLTHFDEILQA--ADGIILSRGNLGIDLPPEKVFL 294 (527)
Q Consensus 221 ~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~----~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~ 294 (527)
-..++.|| +.+.+..+++.. .++.+ +-+... .++..+-+.+.. .|.+-.. ...
T Consensus 133 ~~v~~~SF--~~~~l~~~~~~~------p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 191 (250)
T 3ks6_A 133 ERTTFSSF--LLASMDELWKAT------TRPRL-WLVSPSVLQQLGPGAVIETAIAHSIHEIGVH------------IDT 191 (250)
T ss_dssp GGEEEEES--CHHHHHHHHHHC------CSCEE-EEECHHHHHHHHHHHHHHHHHHTTCCEEEEE------------GGG
T ss_pred CCEEEEeC--CHHHHHHHHHHC------CCCcE-EEEecccccccchhHHHHHHHhcCCCEEecc------------hhh
Confidence 35788888 677777777632 34443 333321 122222222322 2444332 112
Q ss_pred HHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHH
Q 036921 295 FQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKI 366 (527)
Q Consensus 295 ~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i 366 (527)
+-+..++.|+++|++|.+ |- -+. .++..++..|+|+|+-. ||..+.+++.++
T Consensus 192 ~~~~~v~~~~~~G~~V~~WTv----------n~~---~~~~~l~~~GVDgIiTD-------~P~~~~~~~~~~ 244 (250)
T 3ks6_A 192 ADAGLMAQVQAAGLDFGCWAA----------HTP---SQITKALDLGVKVFTTD-------RPTLAIALRTEH 244 (250)
T ss_dssp CCHHHHHHHHHTTCEEEEECC----------CSH---HHHHHHHHHTCSEEEES-------CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEeC----------CCH---HHHHHHHHcCCCEEEcC-------CHHHHHHHHHHh
Confidence 346889999999999999 83 122 34566777899999864 899888887764
No 166
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=59.10 E-value=36 Score=31.48 Aligned_cols=125 Identities=14% Similarity=0.216 Sum_probs=69.1
Q ss_pred HHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHh----HhhHHHHHHh-----CCEEEEeCC
Q 036921 211 VISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEG----LTHFDEILQA-----ADGIILSRG 281 (527)
Q Consensus 211 di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~a----v~nldeI~~~-----sDgImIaRg 281 (527)
.++ ...+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 70 ~v~-~~~~~Gad~vtvh~~~g~~~i~~~~~----~~---gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~ 141 (208)
T 2czd_A 70 IAR-KVFGAGADYVIVHTFVGRDSVMAVKE----LG---EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT 141 (208)
T ss_dssp HHH-HHHHTTCSEEEEESTTCHHHHHHHHT----TS---EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS
T ss_pred HHH-HHHhcCCCEEEEeccCCHHHHHHHHH----hC---CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC
Confidence 443 33689999998876666555444443 21 3455555433221 3445555543 377766522
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcC-CcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHH
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAG-KPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVET 359 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~g-Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~ 359 (527)
.++++..+.+ .+ + .++++ -.+ .+ +-.++..++..|+|.+....--.....|.++
T Consensus 142 ------~~~~i~~lr~----~~---~~~~~iv~gGI--------~~---~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~ 197 (208)
T 2czd_A 142 ------RPERIGYIRD----RL---KEGIKILAPGI--------GA---QGGKAKDAVKAGADYIIVGRAIYNAPNPREA 197 (208)
T ss_dssp ------STHHHHHHHH----HS---CTTCEEEECCC--------CS---STTHHHHHHHHTCSEEEECHHHHTSSSHHHH
T ss_pred ------ChHHHHHHHH----hC---CCCeEEEECCC--------CC---CCCCHHHHHHcCCCEEEEChHHhcCCCHHHH
Confidence 2345433222 22 3 35555 332 22 2224667777899999986544444568888
Q ss_pred HHHHHHHH
Q 036921 360 ISIVGKIC 367 (527)
Q Consensus 360 V~~~~~i~ 367 (527)
++.+++.+
T Consensus 198 ~~~l~~~i 205 (208)
T 2czd_A 198 AKAIYDEI 205 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776543
No 167
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=59.04 E-value=67 Score=31.66 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=54.7
Q ss_pred CCEEEEe-CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH-HHHHhCCcEEEeCCc
Q 036921 273 ADGIILS-RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA-NAVLDGSDAILLGAE 349 (527)
Q Consensus 273 sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~-nav~~g~D~imLs~E 349 (527)
.||+++. ---=+..+..++-..+-+..++.++.+..|+|. +. ..+-.|.-+.+ .|-..|+|++|+..=
T Consensus 42 v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 42 IDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG---------SNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp CCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4999884 111122344455445555555555433589998 65 34445555544 466789999999744
Q ss_pred cccCCChHHHHHHHHHHHHHHh
Q 036921 350 TLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 350 ta~G~yP~e~V~~~~~i~~~aE 371 (527)
--...-+-+.++..+.|+..+.
T Consensus 113 ~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 113 YYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHhCC
Confidence 3333335678888888887764
No 168
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=58.93 E-value=1e+02 Score=32.40 Aligned_cols=118 Identities=14% Similarity=0.199 Sum_probs=69.8
Q ss_pred HHHHHhhcccccccEEEecCC--CCHHHHHHHHHHHHHcCCCCCceEEE-eecChHhHhhHHHHHHhCCEEEEeCCCCcC
Q 036921 209 KEVISSWGVQNKIDFLSLSYT--RHAEDVRQAREYLSKLGDLSQTQIFA-KIENIEGLTHFDEILQAADGIILSRGNLGI 285 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV--~s~~dv~~lr~~l~~~~~~~~~~Iia-KIEt~~av~nldeI~~~sDgImIaRgDLg~ 285 (527)
.+.+. +.++.|+|.+.+.-. .+..-+..++. +... ..+++++ .+-++++...+. -+|+|.+|.|-=+.
T Consensus 230 ~~~a~-~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~---~~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~ 300 (486)
T 2cu0_A 230 IKRAI-ELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQK---VDADFIVGNIANPKAVDDLT----FADAVKVGIGPGSI 300 (486)
T ss_dssp HHHHH-HHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHT---CCSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTT
T ss_pred HHHHH-HHHHhcCCceEEEecCCcEeehhhHHHH-HHHH---hCCccccCCcCCHHHHHHhh----CCCeEEEeeeeccc
Confidence 34443 567899998876532 23333334433 3332 2456666 477777665544 67999995443111
Q ss_pred C-------CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 286 D-------LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 286 e-------~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
. .+...+ ..-..+-+.+++.+.|+|. ..+- --.|++.|+..|||++|+..
T Consensus 301 ~~~r~~~~~g~~~~-~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 301 CTTRIVAGVGVPQI-TAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp BCHHHHTCCCCCHH-HHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred eeeeEEeecCcchH-HHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeCh
Confidence 1 111121 2333444455666899997 5542 24688999999999999964
No 169
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=58.54 E-value=66 Score=31.97 Aligned_cols=94 Identities=12% Similarity=0.131 Sum_probs=60.9
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +--|.++=+++-+. .+..+ .+++||+-+= |.++++......+. +||+|+.+-.
T Consensus 51 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~--grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 51 DFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK--GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPY 128 (314)
T ss_dssp HHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT--TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 47788999998883 34455555555444 44444 5788999884 46666666555554 5999997655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.. ..+.+.+...-+.|.+ +.+.|+++ .
T Consensus 129 y~-~~s~~~l~~~f~~va~---a~~lPiilYn 156 (314)
T 3qze_A 129 YN-KPTQEGMYQHFRHIAE---AVAIPQILYN 156 (314)
T ss_dssp SS-CCCHHHHHHHHHHHHH---HSCSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHHHH---hcCCCEEEEe
Confidence 43 2344566666566655 45899998 5
No 170
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=58.43 E-value=51 Score=32.67 Aligned_cols=106 Identities=14% Similarity=0.197 Sum_probs=72.0
Q ss_pred ccccccEEEecCCCC--------------HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCC
Q 036921 217 VQNKIDFLSLSYTRH--------------AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGN 282 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s--------------~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgD 282 (527)
.+.|+.+|+-+..+. .+-++.++++..+.| +.+++-+-+.+.++-+.+ ..|.+-||-++
T Consensus 45 ~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~G----lp~~tev~d~~~v~~l~~---~vd~lkIgA~~ 117 (288)
T 3tml_A 45 EKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLG----LPVLTDVHSIDEIEQVAS---VVDVLQTPAFL 117 (288)
T ss_dssp HHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHC----CCEEEECCSGGGHHHHHH---HCSEEEECGGG
T ss_pred HHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC----CeEEEEeCCHHHHHHHHH---hCCEEEECccc
Confidence 345888888754432 356777888887765 789998888887766555 48999999665
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH-hCC------cEEEeCC
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL-DGS------DAILLGA 348 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~------D~imLs~ 348 (527)
+- ..+ +++++.+.||||++ |.|. -|-.|+...+..+. .|. +=|+|..
T Consensus 118 ~~------n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~e 172 (288)
T 3tml_A 118 CR------QTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACE 172 (288)
T ss_dssp TT------CHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred cc------CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEe
Confidence 53 333 34556689999999 8752 35577777777664 365 5566653
No 171
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=58.06 E-value=82 Score=29.69 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=68.3
Q ss_pred hhcccccccEEEecCC-------CCHHHHHHHHHHHHHcCCCCCceEEEe-e------cChHhHhhHHHHHHhC-----C
Q 036921 214 SWGVQNKIDFLSLSYT-------RHAEDVRQAREYLSKLGDLSQTQIFAK-I------ENIEGLTHFDEILQAA-----D 274 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV-------~s~~dv~~lr~~l~~~~~~~~~~IiaK-I------Et~~av~nldeI~~~s-----D 274 (527)
+.+.+.|+|+|=+... .+.+++.++++.+.+.| -.+..++- . ...+.++.+.+.++.+ +
T Consensus 22 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~g--l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~ 99 (286)
T 3dx5_A 22 QFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKT--LEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTN 99 (286)
T ss_dssp HHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGT--CCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcC--CeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCC
Confidence 3668999999988432 23578889999998877 23322211 1 0134455566665543 6
Q ss_pred EEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH
Q 036921 275 GIILSRGNLGIDLP----PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 275 gImIaRgDLg~e~~----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav 337 (527)
.|.+..|...-... ++.+...-+++...|+++|..+.+ +. -.+...|..++.++...+
T Consensus 100 ~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~-----~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 100 KIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETH-----PNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp EEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC-----TTSTTSSHHHHHHHHHHH
T ss_pred EEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecC-----CCcCcCCHHHHHHHHHhc
Confidence 77676665432211 234455556777788888887666 42 223344556666666555
No 172
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=58.04 E-value=13 Score=36.10 Aligned_cols=53 Identities=9% Similarity=0.076 Sum_probs=37.9
Q ss_pred CCHHHHHHHH-HcCCCeEEeecCCC-------CHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 41 RSVDVISGCL-KAGMSVARFDFSWG-------NTEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 41 ~~~~~l~~l~-~~G~~v~RiN~shg-------~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
.+.+.++.|. +.|+|++|+-+... +++...+.++.+=+.+.+.| +.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND--MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 4678899999 79999999988653 23445566666666666677 566778753
No 173
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=57.97 E-value=14 Score=34.84 Aligned_cols=122 Identities=15% Similarity=0.099 Sum_probs=71.0
Q ss_pred hhcccccccEEEecCCC-CHHHHHHHHHHHHHcCCCCCceEEE---eec------ChHhHhhHHHHHHhC-----CEEEE
Q 036921 214 SWGVQNKIDFLSLSYTR-HAEDVRQAREYLSKLGDLSQTQIFA---KIE------NIEGLTHFDEILQAA-----DGIIL 278 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~-s~~dv~~lr~~l~~~~~~~~~~Iia---KIE------t~~av~nldeI~~~s-----DgImI 278 (527)
+.+.+.|+|+|=+..-. +..++.++++.+.+.| -.+..+. -+- ..++++.+.+.++.+ +.|.+
T Consensus 25 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~g--l~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~ 102 (275)
T 3qc0_A 25 DICLKHGITAIAPWRDQVAAIGLGEAGRIVRANG--LKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVL 102 (275)
T ss_dssp HHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHT--CEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEE
T ss_pred HHHHHcCCCEEEeccccccccCHHHHHHHHHHcC--CceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 46689999999886521 4577899999999887 2222222 121 124556666666653 66777
Q ss_pred eCCCCcC-CCC----chhHHHHHHHHHHHHHHcCCcEEE-ec-chhhhhcCCCCChHhhhhHHHHH
Q 036921 279 SRGNLGI-DLP----PEKVFLFQKAALYKCNMAGKPAVV-TR-VVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 279 aRgDLg~-e~~----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq-~LeSM~~~p~PtraEv~Dv~nav 337 (527)
..|...- ..+ ++.+...-+++...|.++|..+.+ +. -......+...|-.++.++...+
T Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~ 168 (275)
T 3qc0_A 103 VAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICETL 168 (275)
T ss_dssp ECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHHH
T ss_pred eeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHHh
Confidence 6664431 122 235556667888888889988776 42 11001123344555655555554
No 174
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=57.82 E-value=1.7e+02 Score=32.00 Aligned_cols=97 Identities=21% Similarity=0.186 Sum_probs=63.8
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCC------------------------------CCCceEE
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGD------------------------------LSQTQIF 254 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~------------------------------~~~~~Ii 254 (527)
+..|...++++.-+.|.+.-+++++++++-++.+.+++..... ...+.|+
T Consensus 217 ~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ 296 (606)
T 3t05_A 217 RPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVIT 296 (606)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 6788888876655677889999999999999988776532110 0123344
Q ss_pred E------eecCh-----HhHhhHHHHHHhCCEEEEe----CCCCcCCCCchhHHHHHHHHHHHHHHc
Q 036921 255 A------KIENI-----EGLTHFDEILQAADGIILS----RGNLGIDLPPEKVFLFQKAALYKCNMA 306 (527)
Q Consensus 255 a------KIEt~-----~av~nldeI~~~sDgImIa----RgDLg~e~~~~~v~~~qk~Ii~~c~~~ 306 (527)
| +|+++ |.-+=...|+.-+|++|+. .|+ +|.+-| ..+.+|+..+.++
T Consensus 297 ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~----yPveaV-~~m~~I~~~aE~~ 358 (606)
T 3t05_A 297 ATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGL----YPEEAV-KTMRNIAVSAEAA 358 (606)
T ss_dssp ESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCS----CSHHHH-HHHHHHHHHHHHT
T ss_pred ehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCC----CHHHHH-HHHHHHHHHHHhh
Confidence 3 55543 4444466777778999995 454 455443 5566777766654
No 175
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=57.80 E-value=2.3e+02 Score=33.01 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=79.7
Q ss_pred hhcccccccEEEecCCCCHHHHHHHHHHHHHcCC-----------C------------------CCceEEEeecChHhHh
Q 036921 214 SWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGD-----------L------------------SQTQIFAKIENIEGLT 264 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~-----------~------------------~~~~IiaKIEt~~av~ 264 (527)
+.|.+.|.+.|++.==.+...+.++.+.....|. . ....++.--++.+|..
T Consensus 139 ~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAkN~~Gy~ 218 (1041)
T 3f2b_A 139 EQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQNETGLK 218 (1041)
T ss_dssp HHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEECSHHHHH
T ss_pred HHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeCCHHHHH
Confidence 4678999999999876666666666554433221 0 0123555556899999
Q ss_pred hHHHHHHh--------------------CCEEEEeCCCCcCCCC-------------------------c----------
Q 036921 265 HFDEILQA--------------------ADGIILSRGNLGIDLP-------------------------P---------- 289 (527)
Q Consensus 265 nldeI~~~--------------------sDgImIaRgDLg~e~~-------------------------~---------- 289 (527)
||-.++.. ++|++++.|-+.-++. .
T Consensus 219 nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~~l~~~~ 298 (1041)
T 3f2b_A 219 NLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYKPLIEMD 298 (1041)
T ss_dssp HHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGCCC----
T ss_pred HHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccHHHHhcc
Confidence 99888764 2578887654432221 0
Q ss_pred -----hhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHHHHHhC
Q 036921 290 -----EKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDG 340 (527)
Q Consensus 290 -----~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~nav~~g 340 (527)
++...+.+.+++.+++.|+|++.|+= +.-..|.+++..|+..+...|
T Consensus 299 ~~~~~~~~~~~~~~l~~la~~~~~p~VAT~d----vhy~~~ed~~~~dvL~~~~~~ 350 (1041)
T 3f2b_A 299 YVKDEEMIKNIIRSIVALGEKLDIPVVATGN----VHYLNPEDKIYRKILIHSQGG 350 (1041)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTCCEEECCC----BSBSSGGGHHHHHHHHHTTGG
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEeCC----ceecCHhhHHHHHHHHhhccc
Confidence 11234567899999999999987211 223378899999988876544
No 176
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=57.69 E-value=74 Score=31.46 Aligned_cols=95 Identities=6% Similarity=-0.008 Sum_probs=60.3
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHHHHH-cCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREYLSK-LGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~l~~-~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +.-|.++=.++.+...+ .+ .++.||+-+ -|.++++......+. +|++|+-+-.
T Consensus 42 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 119 (307)
T 3s5o_A 42 HKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP--KNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPC 119 (307)
T ss_dssp HHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC--TTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC--CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 47789999999863 34455555555554443 34 678899987 445566555544444 5999985443
Q ss_pred C-cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 L-GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 L-g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
. ....+.+.+...-+.|. .+.+.|+++ .
T Consensus 120 y~~~~~s~~~l~~~f~~ia---~a~~lPiilYn 149 (307)
T 3s5o_A 120 YYRGRMSSAALIHHYTKVA---DLSPIPVVLYS 149 (307)
T ss_dssp TTGGGCCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHH---hhcCCCEEEEe
Confidence 3 22345566666666664 456899998 5
No 177
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=57.45 E-value=75 Score=29.58 Aligned_cols=142 Identities=18% Similarity=0.224 Sum_probs=84.2
Q ss_pred ceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChH
Q 036921 251 TQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRA 328 (527)
Q Consensus 251 ~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~Ptra 328 (527)
-+|||-|=+.+. +++.++. ++.+++.-||++ --+.+++.++++||++++ -.+. ..-.+.+.
T Consensus 10 ~piI~Avr~~~~---l~~al~s~~~~ifll~g~i~----------~l~~~v~~lk~~~K~v~Vh~Dli----~Gls~d~~ 72 (192)
T 3kts_A 10 QSIIPAAHNQKD---MEKILELDLTYMVMLETHVA----------QLKALVKYAQAGGKKVLLHADLV----NGLKNDDY 72 (192)
T ss_dssp CCEEEEESSSHH---HHHHTTSSCCEEEECSEETT----------THHHHHHHHHHTTCEEEEEGGGE----ETCCCSHH
T ss_pred CCEEEEecCHHH---HHHHHcCCCCEEEEecCcHH----------HHHHHHHHHHHcCCeEEEecCch----hccCCcHH
Confidence 468887755444 5555543 489999878873 345788999999999998 6543 44455554
Q ss_pred hhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHH-HHHHHHHHh
Q 036921 329 EATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIA-SSAVRAAIK 407 (527)
Q Consensus 329 Ev~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia-~~av~~a~~ 407 (527)
-+.=+.+ ..++|+++-+. ..+++..++. ...--...| ..|+.+ ..+++...+
T Consensus 73 ai~fL~~--~~~pdGIIsTk--------~~~i~~Ak~~-----gL~tIqR~F------------liDS~al~~~~~~i~~ 125 (192)
T 3kts_A 73 AIDFLCT--EICPDGIISTR--------GNAIMKAKQH-----KMLAIQRLF------------MIDSSAYNKGVALIQK 125 (192)
T ss_dssp HHHHHHH--TTCCSEEEESC--------HHHHHHHHHT-----TCEEEEEEE------------CCSHHHHHHHHHHHHH
T ss_pred HHHHHHh--CCCCCEEEeCc--------HHHHHHHHHC-----CCeEEEEEE------------EEEcchHHHHHHHHhh
Confidence 4443343 34799998772 2233332220 111111111 123444 456777777
Q ss_pred cCCcEEEEECCCcHHHHHHHhh--CCCCCEEEE
Q 036921 408 VKASVIICFTSSGRAARLIAKY--RPTMPVLSV 438 (527)
Q Consensus 408 ~~a~~Ivv~T~sG~tA~~is~~--RP~~PIiAv 438 (527)
.+.++|=++ .|-.+..+.+. +..+||||.
T Consensus 126 ~~PD~iEiL--PGi~p~iI~~i~~~~~~PiIaG 156 (192)
T 3kts_A 126 VQPDCIELL--PGIIPEQVQKMTQKLHIPVIAG 156 (192)
T ss_dssp HCCSEEEEE--CTTCHHHHHHHHHHHCCCEEEE
T ss_pred cCCCEEEEC--CchhHHHHHHHHHhcCCCEEEE
Confidence 888988666 45555554443 368999987
No 178
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=57.36 E-value=40 Score=32.28 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=61.5
Q ss_pred cccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCE-EEEeC-CC-CcCCCCchhH
Q 036921 216 GVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADG-IILSR-GN-LGIDLPPEKV 292 (527)
Q Consensus 216 ~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDg-ImIaR-gD-Lg~e~~~~~v 292 (527)
+.+.|+|+|.++-.. .+++.++.+.+.+.| +..+.-+-.....+.+.++.+..+| +.+.. .. -|..-+..
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g----~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~-- 186 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKNNN----LELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN-- 186 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHHTT----CEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHHcC----CceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--
Confidence 367899999987543 356777777777766 2233333233345567777777664 43332 11 22221221
Q ss_pred HHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 293 FLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+...+.+-+..+..+.|+++ ..+ =|. .++..+...|+|++...
T Consensus 187 ~~~~~~i~~v~~~~~~pI~vgGGI---------~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 187 PRVESLIQEVKKVTNKPVAVGFGI---------SKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp THHHHHHHHHHHHCSSCEEEESCC---------CSH---HHHHHHHHTTCSEEEEC
T ss_pred chHHHHHHHHHhhcCCeEEEECCc---------CCH---HHHHHHHHcCCCEEEEC
Confidence 11222222222334899998 663 122 34455666799999875
No 179
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=57.27 E-value=24 Score=33.28 Aligned_cols=120 Identities=12% Similarity=0.144 Sum_probs=59.6
Q ss_pred HHHHhhcccccccEEEecC--CCCHHHHHHHHHHHHHcCCCCCceEEEe-----ecCh-------HhHhhHHHHHHh-CC
Q 036921 210 EVISSWGVQNKIDFLSLSY--TRHAEDVRQAREYLSKLGDLSQTQIFAK-----IENI-------EGLTHFDEILQA-AD 274 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sf--V~s~~dv~~lr~~l~~~~~~~~~~IiaK-----IEt~-------~av~nldeI~~~-sD 274 (527)
+++. .+++.|+|.|.+.. ..+++.+.++.+.+ | ..+.+-.. +++. ..++.+.+..+. .|
T Consensus 88 ~~~~-~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~---g--~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 88 DTLA-AALATGCTRVNLGTAALETPEWVAKVIAEH---G--DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCA 161 (244)
T ss_dssp HHHH-HHHHTTCSEEEECHHHHHCHHHHHHHHHHH---G--GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCC
T ss_pred HHHH-HHHHcCCCEEEECchHhhCHHHHHHHHHHc---C--CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCC
Confidence 3454 45789999988763 23444444444433 3 22222121 2322 234444555555 68
Q ss_pred EEEEe---CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh---CCcEEEeC
Q 036921 275 GIILS---RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD---GSDAILLG 347 (527)
Q Consensus 275 gImIa---RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~---g~D~imLs 347 (527)
.|++- |+.-+....++.+ +++ ++..+.|++. ..+ - ...|+..+... |+|++++.
T Consensus 162 ~i~~~~~~~~~~~~g~~~~~~----~~i---~~~~~ipvia~GGI---------~---~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 162 RYVVTDIAKDGTLQGPNLELL----KNV---CAATDRPVVASGGV---------S---SLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CEEEEEC-------CCCHHHH----HHH---HHTCSSCEEEESCC---------C---SHHHHHHHHTTGGGTEEEEEEC
T ss_pred EEEEeccCcccccCCCCHHHH----HHH---HHhcCCCEEEECCC---------C---CHHHHHHHHhhccCCCceeeee
Confidence 77763 2211111222222 222 2445899998 653 2 23455666666 99999997
Q ss_pred CccccCC
Q 036921 348 AETLRGL 354 (527)
Q Consensus 348 ~Eta~G~ 354 (527)
.--..+.
T Consensus 223 ~al~~~~ 229 (244)
T 1vzw_A 223 KALYAKA 229 (244)
T ss_dssp HHHHTTS
T ss_pred HHHHcCC
Confidence 4333344
No 180
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=57.07 E-value=1.6e+02 Score=29.28 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=31.6
Q ss_pred HHHHHHHHhc----CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 399 SSAVRAAIKV----KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 399 ~~av~~a~~~----~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
..+.++..++ +.+.||+.+-+|.|+.-+++ ..|.+.|+++-+
T Consensus 185 t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~ 234 (342)
T 4d9b_A 185 ESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTV 234 (342)
T ss_dssp HHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEe
Confidence 3456666664 47899999999988766654 479999999843
No 181
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=56.87 E-value=13 Score=38.41 Aligned_cols=51 Identities=12% Similarity=0.218 Sum_probs=41.1
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 29 MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
+..+.+.+|+.....+.++.++++|++++=||++||+++...++++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677788655567889999999999999999999987777777777764
No 182
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=56.80 E-value=38 Score=33.47 Aligned_cols=151 Identities=12% Similarity=0.036 Sum_probs=86.9
Q ss_pred CCCCHhhHHHHHhhcccc--cccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHH--------HHH
Q 036921 202 PTLSDKDKEVISSWGVQN--KIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDE--------ILQ 271 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~--g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nlde--------I~~ 271 (527)
|.-|+.|.+.+-+-+.+. |++.|+++ +..+..+++.|...|.+..++|.+-|=-+.|-...+. |-.
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 556888887776667788 99999876 4567777877864331016788887755444333332 222
Q ss_pred hCCEEEEeCCCCcCCCCc---hhHH---HHHHHHHHHHHHc-CCc--EEE-ecchhhhhcCCCCChHh-hhhHHH-HHHh
Q 036921 272 AADGIILSRGNLGIDLPP---EKVF---LFQKAALYKCNMA-GKP--AVV-TRVVDSMTDNLRPTRAE-ATDVAN-AVLD 339 (527)
Q Consensus 272 ~sDgImIaRgDLg~e~~~---~~v~---~~qk~Ii~~c~~~-gKp--vi~-Tq~LeSM~~~p~PtraE-v~Dv~n-av~~ 339 (527)
=+|.|-+- +.++. .+.. .+.+.|-+...+. ++| ||+ |-.| +..| +..... ++..
T Consensus 119 GAdEIDmV-----inig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~ea 184 (281)
T 2a4a_A 119 GADEIDLV-----INYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLNG 184 (281)
T ss_dssp TCSEEEEE-----CCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHTT
T ss_pred CCCEEEEe-----cchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHh
Confidence 34655331 22221 1222 4444444444333 455 366 6554 5566 433333 6778
Q ss_pred CCcEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 340 GSDAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 340 g~D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
|+|.|=-|.-=.-|.--++.|+.|++.+++.
T Consensus 185 GADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 185 NADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp TCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9999876621111334578999999988764
No 183
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=56.74 E-value=19 Score=36.23 Aligned_cols=61 Identities=8% Similarity=0.121 Sum_probs=41.7
Q ss_pred CeEEEEecCCCCCCH----HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 29 MTKIVGTLGPKSRSV----DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~----~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+....+++|- .++ +..+++.++|.+.+.+++.|++.+.-.+.++.+|++ .|..+.|++|..
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQA---VGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---hCCCCEEEEECC
Confidence 4555666552 234 345667789999999999998888777888888776 344455555543
No 184
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=56.52 E-value=55 Score=33.01 Aligned_cols=124 Identities=10% Similarity=0.098 Sum_probs=63.1
Q ss_pred hhHHHHHhhcccccccEEEecC----------------CCCHHHHHHHHHHHHHcCCCCCceEEEeecC----hHhHhhH
Q 036921 207 KDKEVISSWGVQNKIDFLSLSY----------------TRHAEDVRQAREYLSKLGDLSQTQIFAKIEN----IEGLTHF 266 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sf----------------V~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt----~~av~nl 266 (527)
.+.....+.+.+.|+|+|-+.+ .++++.+.++.+.+.+. -++.|..||-. ....++.
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~---v~~PV~vKiR~g~~~~~~~~~~ 146 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA---VRVPVTVKMRLGLEGKETYRGL 146 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH---CSSCEEEEEESCBTTCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH---hCCceEEEEecCcCccccHHHH
Confidence 3344333466788999988765 34455666666666543 24678888731 1111122
Q ss_pred HHHH----Hh-CCEEEEeCCCC--cCCCCch--hHHHHHHHHHHHHH-Hc-CCcEEE-ecchhhhhcCCCCChHhhhhHH
Q 036921 267 DEIL----QA-ADGIILSRGNL--GIDLPPE--KVFLFQKAALYKCN-MA-GKPAVV-TRVVDSMTDNLRPTRAEATDVA 334 (527)
Q Consensus 267 deI~----~~-sDgImIaRgDL--g~e~~~~--~v~~~qk~Ii~~c~-~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~ 334 (527)
.+++ +. .|+|.|-.+.- |.. |.. ..+...-..+...+ .. +.|+|. ..+ -|.. |+.
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI---------~s~e---da~ 213 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNGGI---------RSLE---EAL 213 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSC---------CSHH---HHH
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEECCc---------CCHH---HHH
Confidence 3322 22 48998864321 111 000 00001112333333 34 799998 653 2333 444
Q ss_pred HHHHhCCcEEEeC
Q 036921 335 NAVLDGSDAILLG 347 (527)
Q Consensus 335 nav~~g~D~imLs 347 (527)
.++. |+|+||+.
T Consensus 214 ~~l~-GaD~V~iG 225 (350)
T 3b0p_A 214 FHLK-RVDGVMLG 225 (350)
T ss_dssp HHHT-TSSEEEEC
T ss_pred HHHh-CCCEEEEC
Confidence 4554 99999996
No 185
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=56.47 E-value=17 Score=36.94 Aligned_cols=57 Identities=11% Similarity=0.222 Sum_probs=40.6
Q ss_pred CCCCCCHHHHHHHHHcCCCeEEeecCCCC-------H-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 37 GPKSRSVDVISGCLKAGMSVARFDFSWGN-------T-EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 37 Gp~~~~~~~l~~l~~~G~~v~RiN~shg~-------~-e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
|..-.+.+.++.|.+.|+|++||-++... . +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G--i~vIldlH~ 113 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHH 113 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 44445789999999999999999997532 1 344555555555556667 677899874
No 186
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=55.48 E-value=21 Score=36.10 Aligned_cols=57 Identities=16% Similarity=0.248 Sum_probs=39.1
Q ss_pred CCCCCCHHHHHHHHHcCCCeEEeecCCCCH---------HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 37 GPKSRSVDVISGCLKAGMSVARFDFSWGNT---------EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 37 Gp~~~~~~~l~~l~~~G~~v~RiN~shg~~---------e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
|+.....+.++.|.+.|+|++||-++.... +.+.+.++.+=+.+++.| +.+++|+-.
T Consensus 58 ~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~G--i~vild~H~ 123 (380)
T 1edg_A 58 SGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK--MYVILNTHH 123 (380)
T ss_dssp TCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT--CEEEEECCS
T ss_pred CCCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEeCCC
Confidence 344457889999999999999998865421 333444555444455556 678999875
No 187
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=55.42 E-value=1.5e+02 Score=28.45 Aligned_cols=159 Identities=15% Similarity=0.090 Sum_probs=0.0
Q ss_pred HhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhC
Q 036921 263 LTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDG 340 (527)
Q Consensus 263 v~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g 340 (527)
.+.++++++. +|+|||| |..|+ ..+++..+-++|=+ ...|++. +- .| +.+..|
T Consensus 26 ~~~l~~~~~~GtDaI~vG-gs~gv--t~~~~~~~v~~ik~----~~~Piil~p~---------~~---------~~~~~g 80 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIG-GTDDV--TEDNVIHLMSKIRR----YPLPLVLEIS---------NI---------ESVMPG 80 (235)
T ss_dssp HHHHHHHHTSSCSEEEEC-CSSCC--CHHHHHHHHHHHTT----SCSCEEEECC---------CS---------TTCCTT
T ss_pred HHHHHHHHHcCCCEEEEC-CcCCc--CHHHHHHHHHHhcC----cCCCEEEecC---------CH---------HHhhcC
Q ss_pred CcEEEeCCccccCCChHHHHHHHHHHHHHHhh-------------ccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHh
Q 036921 341 SDAILLGAETLRGLYPVETISIVGKICAEAEK-------------VFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIK 407 (527)
Q Consensus 341 ~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~-------------~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~ 407 (527)
+|++++- .--.+..|--.+.....-+++.-- ..+...--.+.....+.+ ..+.++..|..+++-
T Consensus 81 aD~il~p-slln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~--~~e~iaa~A~~a~~~ 157 (235)
T 3w01_A 81 FDFYFVP-TVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDL--TTEDLEAYAQMVNHM 157 (235)
T ss_dssp CSEEEEE-EETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCC--CHHHHHHHHHHHHHT
T ss_pred CCEEEEc-cccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCC--CHHHHHHHHHHHHHH
Q ss_pred cCCcEEEEECCCcHH--HHHHHhhCCCC---CEEEEeeccccccccccccCcHHHHHhh
Q 036921 408 VKASVIICFTSSGRA--ARLIAKYRPTM---PVLSVVIPRLKTNQLKWSFSGAFEARQS 461 (527)
Q Consensus 408 ~~a~~Ivv~T~sG~t--A~~is~~RP~~---PIiAv~~~~~~~~~~~~~t~~~~~aR~L 461 (527)
++-..|-+-. +|.+ ..++.+.|-.+ |++...- .+++..|+++
T Consensus 158 ~g~~~vY~e~-sG~~g~~~~v~~ir~~~~~~pv~vGfG-----------I~~~e~a~~~ 204 (235)
T 3w01_A 158 YRLPVMYIEY-SGIYGDVSKVQAVSEHLTETQLFYGGG-----------ISSEQQATEM 204 (235)
T ss_dssp TCCSEEEEEC-TTSCCCHHHHHHHHTTCSSSEEEEESC-----------CCSHHHHHHH
T ss_pred cCCCEEEEec-CCCcCCHHHHHHHHHhcCCCCEEEECC-----------cCCHHHHHHH
No 188
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=55.36 E-value=1e+02 Score=28.97 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=24.7
Q ss_pred HHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 304 NMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 304 ~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
++.+.|+|+ |. ..+..+...+...|+|..+.-.
T Consensus 71 r~~~~pvi~lt~------------~~~~~~~~~a~~~Ga~dyl~Kp 104 (259)
T 3luf_A 71 LERGLPVVILTA------------DISEDKREAWLEAGVLDYVMKD 104 (259)
T ss_dssp HHTTCCEEEEEC------------C-CHHHHHHHHHTTCCEEEECS
T ss_pred HhCCCCEEEEEc------------cCCHHHHHHHHHCCCcEEEeCC
Confidence 345799998 74 3456677888999999998863
No 189
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=55.29 E-value=47 Score=31.88 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=67.7
Q ss_pred ccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH----hCCEEEEeCC---CCc---CC
Q 036921 217 VQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ----AADGIILSRG---NLG---ID 286 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~----~sDgImIaRg---DLg---~e 286 (527)
...|+|+|-++-- .-.+.++|++++ ....|-+-+ .+.+|+.+ -+|.|.+++- +.- ..
T Consensus 109 ~~~gAdGVHLg~~--dl~~~~~r~~~~-----~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~ 175 (243)
T 3o63_A 109 RAAGADVLHLGQR--DLPVNVARQILA-----PDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAA 175 (243)
T ss_dssp HHHTCSEEEECTT--SSCHHHHHHHSC-----TTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----C
T ss_pred HHhCCCEEEecCC--cCCHHHHHHhhC-----CCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcch
Confidence 5677888777632 223455555443 222333323 33444433 2599999762 111 12
Q ss_pred CCchhHHHHHHHHHHHHHH--cCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHH
Q 036921 287 LPPEKVFLFQKAALYKCNM--AGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIV 363 (527)
Q Consensus 287 ~~~~~v~~~qk~Ii~~c~~--~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~ 363 (527)
.+++.+.. .+.. ..+|++. ..+ +. .++......|+|++.+.+.-..-..|.++++.+
T Consensus 176 ~gl~~l~~-------~~~~~~~~iPvvAiGGI----------~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l 235 (243)
T 3o63_A 176 PGLGLVRV-------AAELGGDDKPWFAIGGI----------NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQL 235 (243)
T ss_dssp CCHHHHHH-------HHTC---CCCEEEESSC----------CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred hhHHHHHH-------HHHhccCCCCEEEecCC----------CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHH
Confidence 33333222 2222 3799987 553 22 344666677999999977666667899999988
Q ss_pred HHHHHH
Q 036921 364 GKICAE 369 (527)
Q Consensus 364 ~~i~~~ 369 (527)
.+.+.+
T Consensus 236 ~~~~~~ 241 (243)
T 3o63_A 236 RSALTA 241 (243)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 876643
No 190
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=55.11 E-value=84 Score=30.96 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=60.4
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=.++-+. .+..+ .+++||+-+= |.++++....--+. +||+|+.+-.
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~--grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 117 (301)
T 1xky_A 40 NYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD--KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPY 117 (301)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4778899999887 334555555555444 33444 5788999884 46677666555544 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
+.- .+.+.+...-+.| |.+.+.|+++ .
T Consensus 118 y~~-~s~~~l~~~f~~v---a~a~~lPiilYn 145 (301)
T 1xky_A 118 YNK-PSQEGMYQHFKAI---AESTPLPVMLYN 145 (301)
T ss_dssp SSC-CCHHHHHHHHHHH---HHTCSSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 432 2445555555555 4456899998 5
No 191
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=54.59 E-value=73 Score=31.37 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=59.0
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCC-CceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLS-QTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRG 281 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~-~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRg 281 (527)
++.++.|+|+|++. +--|.++=+++-+. .+..+ . +++||+-+= |.++++.....-+. +||+|+.+-
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCK--GTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 47789999999874 33344554454443 34444 5 789999883 55566555555444 599999765
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
... ..+.+.+...-+.|.+ +.+.|+++ .
T Consensus 113 ~y~-~~s~~~l~~~f~~va~---a~~lPiilYn 141 (301)
T 3m5v_A 113 YYN-KPTQQGLYEHYKAIAQ---SVDIPVLLYN 141 (301)
T ss_dssp CSS-CCCHHHHHHHHHHHHH---HCSSCEEEEE
T ss_pred CCC-CCCHHHHHHHHHHHHH---hCCCCEEEEe
Confidence 543 2244555555555554 45899998 5
No 192
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=54.54 E-value=1.4e+02 Score=28.06 Aligned_cols=111 Identities=19% Similarity=0.153 Sum_probs=69.7
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee-cCh--------HhHhhHHHHHHh-CC
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI-ENI--------EGLTHFDEILQA-AD 274 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI-Et~--------~av~nldeI~~~-sD 274 (527)
++.+...+.+.....|+.+|.+ .+.++++++|+.. +++|+..+ +.. .-++.+++..+. +|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-------~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad 103 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-------SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGAD 103 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-------CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred CcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-------CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCC
Confidence 4456666655556789999886 5889998888643 35566432 100 123445666655 59
Q ss_pred EEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 275 GIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 275 gImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
.|.+.-..+ ..+ ...+.+++.++++|.+++. .. |..| ...+...|+|.+-.
T Consensus 104 ~I~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~v~-----------t~ee---a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 104 IIAFDASFR---SRP----VDIDSLLTRIRLHGLLAMADCS-----------TVNE---GISCHQKGIEFIGT 155 (229)
T ss_dssp EEEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEECS-----------SHHH---HHHHHHTTCSEEEC
T ss_pred EEEECcccc---CCh----HHHHHHHHHHHHCCCEEEEecC-----------CHHH---HHHHHhCCCCEEEe
Confidence 988864432 111 2346778888899999887 43 3333 35667789999963
No 193
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=54.23 E-value=1.5e+02 Score=28.94 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=62.6
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHHHHc-CCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYLSKL-GDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l~~~-~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
+|.++.|+|+|++ ++.-|.++=.++-+...+. + .+++||+-+= |.++++....-.+. +||+|+.+-.
T Consensus 31 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 108 (294)
T 3b4u_A 31 RRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI--APSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPS 108 (294)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC--CGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 4778999999987 3555666666665555443 3 5788999884 36666665555544 5999997665
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
+.-..+.+.+...-+.|.+++-+-+.|+++ .
T Consensus 109 y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 109 YFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp SSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 533134556665556554432111799998 5
No 194
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=54.15 E-value=53 Score=34.96 Aligned_cols=124 Identities=14% Similarity=0.187 Sum_probs=71.6
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+...++... ..+..+++...+++++....+.
T Consensus 126 ~a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~ 193 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIVM-----------PEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIV 193 (527)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEEC
T ss_pred HHHHHHHHHhCCeEEEEE-----------cCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEe
Confidence 4566788999999886 2 2222233445555679998877654211 1133455555555544222221
Q ss_pred hhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHhh----CCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVK--ASVIICFTSSGRAARLIAKY----RPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~~----RP~~PIiAv~~ 440 (527)
.. .|. .|.++..-....+.++..+++ .+.||+.+-+|.++.-++++ .|.+.|+++-+
T Consensus 194 ~~-~~~-------n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~ 256 (527)
T 3pc3_A 194 LD-QYR-------NAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDP 256 (527)
T ss_dssp CC-TTT-------CTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred cC-CCC-------CcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence 11 111 011122222334566777764 79999999999997766654 89999999854
No 195
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=54.14 E-value=20 Score=36.43 Aligned_cols=62 Identities=10% Similarity=0.107 Sum_probs=42.0
Q ss_pred CeEEEEecCCCCCCH----HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 29 MTKIVGTLGPKSRSV----DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~----~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+....+|.|....++ +..+++.+.|.+.+.|++.|++.+.-.+.++.+|++ .|..+.|++|.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~G~d~~l~vDa 198 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREH---LGDSFPLMVDA 198 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHH---HCTTSCEEEEC
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHH---hCCCCeEEEEC
Confidence 345556655322244 345667889999999999999988777888888776 34334555554
No 196
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=54.13 E-value=92 Score=32.43 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=65.8
Q ss_pred ccccccEEEecC----------CCCHHHHHHHHHHHHHc-----------------CCCCCce-EEEeecChHhHhhHHH
Q 036921 217 VQNKIDFLSLSY----------TRHAEDVRQAREYLSKL-----------------GDLSQTQ-IFAKIENIEGLTHFDE 268 (527)
Q Consensus 217 ~~~g~d~I~~sf----------V~s~~dv~~lr~~l~~~-----------------~~~~~~~-IiaKIEt~~av~nlde 268 (527)
+...+|+|-+.+ -++++.+.++-+.+.+. +...+.+ |+.||=--..-+++.+
T Consensus 208 l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~ 287 (415)
T 3i65_A 208 IGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKE 287 (415)
T ss_dssp HGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHH
T ss_pred HHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHH
Confidence 334489888664 24555565554444332 0002456 8999932222234566
Q ss_pred HHHh-----CCEEEEeC-----CCC---cCCCC----chhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChH
Q 036921 269 ILQA-----ADGIILSR-----GNL---GIDLP----PEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRA 328 (527)
Q Consensus 269 I~~~-----sDgImIaR-----gDL---g~e~~----~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~Ptra 328 (527)
|++. +|||.+.- -|+ ..+.+ ....+...+.|-+..++. .+|+|. ..+-
T Consensus 288 iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~------------ 355 (415)
T 3i65_A 288 IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF------------ 355 (415)
T ss_dssp HHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC------------
T ss_pred HHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC------------
Confidence 6654 49998842 111 11111 122344444444444445 589998 6642
Q ss_pred hhhhHHHHHHhCCcEEEeC
Q 036921 329 EATDVANAVLDGSDAILLG 347 (527)
Q Consensus 329 Ev~Dv~nav~~g~D~imLs 347 (527)
-..|+..++..|||+|++.
T Consensus 356 s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 356 SGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp SHHHHHHHHHHTEEEEEES
T ss_pred CHHHHHHHHHcCCCEEEEc
Confidence 3467788888999999997
No 197
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=54.09 E-value=83 Score=30.31 Aligned_cols=57 Identities=21% Similarity=0.233 Sum_probs=39.8
Q ss_pred HcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhc
Q 036921 305 MAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKV 373 (527)
Q Consensus 305 ~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~ 373 (527)
...+|+++ ..+ -| -.|+..++..|+|++....--.....|.++++-+.+.++++...
T Consensus 176 ~~~iPviv~gGI---------~t---~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~~~~~~ 233 (264)
T 1xm3_A 176 QAKVPVIVDAGI---------GS---PKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEAGRLS 233 (264)
T ss_dssp HCSSCBEEESCC---------CS---HHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCC---------CC---HHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 35899998 553 12 24567778889999999754444456888888888877765443
No 198
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=53.98 E-value=1.1e+02 Score=29.67 Aligned_cols=83 Identities=17% Similarity=0.079 Sum_probs=55.6
Q ss_pred hhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCc
Q 036921 264 THFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSD 342 (527)
Q Consensus 264 ~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D 342 (527)
++++++++.+|.++-. . .|..-...+..|.++|+|+++ |-- .+..+...+..+... =
T Consensus 65 ~dl~~ll~~~DVVIDf--------T---~p~a~~~~~~~al~~G~~vVigTTG---------~s~~~~~~L~~aa~~--~ 122 (272)
T 4f3y_A 65 DDIERVCAEADYLIDF--------T---LPEGTLVHLDAALRHDVKLVIGTTG---------FSEPQKAQLRAAGEK--I 122 (272)
T ss_dssp CCHHHHHHHCSEEEEC--------S---CHHHHHHHHHHHHHHTCEEEECCCC---------CCHHHHHHHHHHTTT--S
T ss_pred CCHHHHhcCCCEEEEc--------C---CHHHHHHHHHHHHHcCCCEEEECCC---------CCHHHHHHHHHHhcc--C
Confidence 6788888888987753 1 244556788999999999999 632 245555566665443 3
Q ss_pred EEEeCCccccCCChHHHHHHHHHHHHHHhhcc
Q 036921 343 AILLGAETLRGLYPVETISIVGKICAEAEKVF 374 (527)
Q Consensus 343 ~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~ 374 (527)
.++.+.-.++| |-.|.+++++|=+.+
T Consensus 123 ~vv~a~N~s~G------v~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 123 ALVFSANMSVG------VNVTMKLLEFAAKQF 148 (272)
T ss_dssp EEEECSCCCHH------HHHHHHHHHHHHHHT
T ss_pred CEEEECCCCHH------HHHHHHHHHHHHHhc
Confidence 46777666666 445666666665555
No 199
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=53.77 E-value=68 Score=31.68 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=58.0
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +--|.++=+++-+. .+..+ .+++||+-+ -|.++++......+. +||+|+.+-.
T Consensus 43 ~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 43 NHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG--DRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC--CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 47788999998874 33345555555444 34444 678999988 345566555555444 5999997654
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
..- .+.+.+...-+.|. .+.+.|+++
T Consensus 121 y~~-~s~~~l~~~f~~va---~a~~lPiil 146 (304)
T 3l21_A 121 YSK-PPQRGLQAHFTAVA---DATELPMLL 146 (304)
T ss_dssp SSC-CCHHHHHHHHHHHH---TSCSSCEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhcCCCEEE
Confidence 432 24455555555544 445899998
No 200
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=53.67 E-value=63 Score=32.75 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=76.1
Q ss_pred CHhhHHHHHhhccccccc-EEEecCC-----------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh
Q 036921 205 SDKDKEVISSWGVQNKID-FLSLSYT-----------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA 272 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d-~I~~sfV-----------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~ 272 (527)
+..|.....+...+.|+| +|-+.+= ++++.+.++.+.+.+. .+.+|+.||=--.....+.++++.
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~---~~~PV~vKi~p~~~~~~~a~~~~~ 215 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY---FTKPLGIKLPPYFDIVHFDQAAAI 215 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT---CCSCEEEEECCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH---hCCCeEEEECCCCCHHHHHHHHHH
Confidence 445555443332335766 8777643 4555555555555433 357899999432223334444443
Q ss_pred --CCEE---E----------EeCCCCc----CCC----CchhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCC
Q 036921 273 --ADGI---I----------LSRGNLG----IDL----PPEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPT 326 (527)
Q Consensus 273 --sDgI---m----------IaRgDLg----~e~----~~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~Pt 326 (527)
+|+| - |.+.-.. .+. |....+...+.+-+..++. ..|+|. ..+-
T Consensus 216 aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~---------- 285 (345)
T 3oix_A 216 FNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX---------- 285 (345)
T ss_dssp HTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC----------
T ss_pred hCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC----------
Confidence 2433 1 2221110 011 1122333444444444444 589988 6542
Q ss_pred hHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhc
Q 036921 327 RAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKV 373 (527)
Q Consensus 327 raEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~ 373 (527)
...|+..++..|||+||+..--..+. | .++.+|.++.+.+
T Consensus 286 --s~~da~~~l~aGAd~V~igra~~~~g-P----~~~~~i~~~L~~~ 325 (345)
T 3oix_A 286 --TGRDAFEHILCGASMVQIGTALHQEG-P----QIFKRITKELXAI 325 (345)
T ss_dssp --SHHHHHHHHHHTCSEEEESHHHHHHC-T----HHHHHHHHHHHHH
T ss_pred --ChHHHHHHHHhCCCEEEEChHHHhcC-h----HHHHHHHHHHHHH
Confidence 24577888888999999984312221 3 3455555555544
No 201
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=53.20 E-value=1.8e+02 Score=28.89 Aligned_cols=115 Identities=15% Similarity=0.196 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.|+.+ - |..+.-..+...-..|++.+...+. .-++.+...+++++-...+-
T Consensus 89 ~a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~~------~~~~~~~a~~l~~~~~~~~i 151 (346)
T 3l6b_A 89 QALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEPS------DESRENVAKRVTEETEGIMV 151 (346)
T ss_dssp HHHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECSS------HHHHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC------HHHHHHHHHHHHHhcCCEEE
Confidence 4566779999999887 2 1111122344455679998766532 35777777776654322111
Q ss_pred hhhhhhhhhcccCCCCCh--HHHHHHHHHHHHHhc-CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTH--LESIASSAVRAAIKV-KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~-~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
. .| .++ ...-...+.++..++ +.+.|||.+-+|.+..-+++ ..|.+.|+++-+
T Consensus 152 ~--~~----------~np~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~ 211 (346)
T 3l6b_A 152 H--PN----------QEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEP 211 (346)
T ss_dssp C--SS----------SCHHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred C--CC----------CChHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence 0 01 111 122223345666665 57899999999998766654 479999999854
No 202
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=53.17 E-value=36 Score=34.68 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=42.3
Q ss_pred CeEEEEecCCCCCCH-------HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 29 MTKIVGTLGPKSRSV-------DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~-------~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+....+++|-+..++ +..+++.++|.+.+.+...|++.+.-.+.++.+|++ .|..+.|++|..
T Consensus 123 ~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a---~G~d~~l~vDan 192 (382)
T 2gdq_A 123 EIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHT---AGSSITMILDAN 192 (382)
T ss_dssp EEEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred ceeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---hCCCCEEEEECC
Confidence 345555564222333 345667789999999999998888777888888876 344455566653
No 203
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=53.11 E-value=62 Score=32.08 Aligned_cols=66 Identities=11% Similarity=0.117 Sum_probs=46.2
Q ss_pred CCEEEEeCC-----CCcCCC--CchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh--CCc
Q 036921 273 ADGIILSRG-----NLGIDL--PPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD--GSD 342 (527)
Q Consensus 273 sDgImIaRg-----DLg~e~--~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~--g~D 342 (527)
+|.|.+-+| ..|... ..++-+...+.+.+++++..+-+++ ++- -|+ ++-.|++.++.. |+|
T Consensus 184 pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~g------GpI---stpeDv~~~l~~t~G~~ 254 (286)
T 2p10_A 184 ADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHG------GPI---ANPEDARFILDSCQGCH 254 (286)
T ss_dssp CSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEES------TTC---CSHHHHHHHHHHCTTCC
T ss_pred CCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecC------CCC---CCHHHHHHHHhcCCCcc
Confidence 488888666 555554 4467788999999999999988888 650 022 345688888888 999
Q ss_pred EEEeC
Q 036921 343 AILLG 347 (527)
Q Consensus 343 ~imLs 347 (527)
++...
T Consensus 255 G~~gA 259 (286)
T 2p10_A 255 GFYGA 259 (286)
T ss_dssp EEEES
T ss_pred EEEee
Confidence 99986
No 204
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=53.09 E-value=98 Score=29.91 Aligned_cols=102 Identities=13% Similarity=0.086 Sum_probs=60.9
Q ss_pred cEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHh----HhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHH
Q 036921 222 DFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEG----LTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQK 297 (527)
Q Consensus 222 d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~a----v~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk 297 (527)
..++.|| +.+-+..+++.. .++.+..-++.... -..+..+...++++-+... .+-.
T Consensus 172 ~vii~SF--~~~~l~~~~~~~------p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------------~~~~ 231 (287)
T 2oog_A 172 HVMIQSF--SDESLKKIHRQN------KHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYT------------DLTE 231 (287)
T ss_dssp SEEEEES--CHHHHHHHHHHC------TTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGG------------GCCH
T ss_pred CEEEEeC--CHHHHHHHHHhC------CCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHh------------hcCH
Confidence 4778888 677777776642 34444444433211 1223444444566543211 1235
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHH
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIV 363 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~ 363 (527)
..++.++++|++|.+ |- + +-.++..++..|+|+|+- .||..+.+++
T Consensus 232 ~~v~~~~~~G~~v~~wTv--n-----------~~~~~~~l~~~GVdgIiT-------D~P~~~~~~~ 278 (287)
T 2oog_A 232 QNTHHLKDLGFIVHPYTV--N-----------EKADMLRLNKYGVDGVFT-------NFADKYKEVI 278 (287)
T ss_dssp HHHHHHHHTTCEECCBCC--C-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeC--C-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHH
Confidence 778999999999998 83 1 223556677789999975 4887766554
No 205
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=53.03 E-value=35 Score=33.70 Aligned_cols=68 Identities=22% Similarity=0.249 Sum_probs=50.2
Q ss_pred CeEEEEecCCCCC---------C----HHHHHHHHHcCCCeEEeec-CC--C-----CHHHHHHHHHHHHHHHHHcCCce
Q 036921 29 MTKIVGTLGPKSR---------S----VDVISGCLKAGMSVARFDF-SW--G-----NTEYHQETLENLKAAVKTTKKLC 87 (527)
Q Consensus 29 ~tkIi~TiGp~~~---------~----~~~l~~l~~~G~~v~RiN~-sh--g-----~~e~~~~~i~~ir~~~~~~~~~v 87 (527)
+++||+-|.+.-+ + .+..++|++.|+++.=+|. |- | ..||..+++.-++...++.+ +
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--~ 91 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--V 91 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC--C
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC--C
Confidence 5788888865432 1 2456889999999999999 43 2 16888888888888877665 5
Q ss_pred EEEecCCCCeE
Q 036921 88 AVMLDTVGPEL 98 (527)
Q Consensus 88 ~i~~Dl~Gpki 98 (527)
.|.+|+.-|++
T Consensus 92 piSIDT~~~~v 102 (282)
T 1aj0_A 92 WISVDTSKPEV 102 (282)
T ss_dssp EEEEECCCHHH
T ss_pred eEEEeCCCHHH
Confidence 67889886664
No 206
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=52.91 E-value=28 Score=35.25 Aligned_cols=54 Identities=13% Similarity=0.181 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHcCCCeEEeecCCCC----------HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 40 SRSVDVISGCLKAGMSVARFDFSWGN----------TEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 40 ~~~~~~l~~l~~~G~~v~RiN~shg~----------~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
..+.+.++.|.+.|+|++||-++... .+...+.++.+=+.+.+.| +.+++|+-.
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~G--i~vildlH~ 125 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNG--AFVILNLHH 125 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCS
T ss_pred cCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 45688999999999999999886531 1223444444444455556 678899875
No 207
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=52.90 E-value=67 Score=31.38 Aligned_cols=116 Identities=9% Similarity=0.009 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++.+ - |..+....+...-..|++.+...++ |. .-++.+...+++++.+.. |
T Consensus 75 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~--~ 137 (303)
T 2v03_A 75 ALAMIAALKGYRMKLLM-----------PDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK--L 137 (303)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE--E
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc--c
Confidence 567788999999886 2 2112123344555569998877643 12 345555554444331111 2
Q ss_pred hhhhhhhhcccCCCCChH--H-HHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTHL--E-SIASSAVRAAIKVK--ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~--~-~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
...| .++. . -....+.++..+++ .+.|||.+-+|.++.-+++ ..|...|+++-+
T Consensus 138 ~~~~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 200 (303)
T 2v03_A 138 LDQF----------NNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP 200 (303)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred cCCc----------CChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcC
Confidence 1111 1111 1 12234567777764 6999999999999777665 368999999854
No 208
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=52.85 E-value=1.3e+02 Score=29.46 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=61.9
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
+|.++.|+|+|++ ++.-|.++=.++-+.. +..+ .+++||+-+= |.++++.....-+. +||+|+.+-.
T Consensus 39 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~--grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 39 QFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK--GKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPF 116 (303)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCC
Confidence 4778999999987 3445555555555443 3444 5789999884 46677666555554 5999986655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcC-CcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAG-KPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~g-Kpvi~-T 313 (527)
+.- .+.+.+...-+.|.+++ + .|+++ .
T Consensus 117 y~~-~s~~~l~~~f~~va~a~---~~lPiilYn 145 (303)
T 2wkj_A 117 YYP-FSFEEHCDHYRAIIDSA---DGLPMVVYN 145 (303)
T ss_dssp SSC-CCHHHHHHHHHHHHHHH---TTCCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHHHhC---CCCCEEEEe
Confidence 432 25566666666665544 5 99998 5
No 209
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=52.63 E-value=1.7e+02 Score=28.43 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=60.9
Q ss_pred hhccc-ccccEEEe------cCCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCC
Q 036921 214 SWGVQ-NKIDFLSL------SYTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRG 281 (527)
Q Consensus 214 ~~~~~-~g~d~I~~------sfV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRg 281 (527)
++.++ .|+|+|++ ++--|.++=.++-+.. +..+ .+++||+-+= |.++++.....-+. +||+|+.+-
T Consensus 31 ~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK--DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTP 108 (293)
T ss_dssp HHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC--CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 47788 99999887 3445665555554443 3444 5789999984 36666665555444 599998765
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
... ..+.+.+...-+.|.+ +.+.|+++ .
T Consensus 109 ~y~-~~~~~~l~~~f~~va~---a~~lPiilYn 137 (293)
T 1f6k_A 109 FYY-KFSFPEIKHYYDTIIA---ETGSNMIVYS 137 (293)
T ss_dssp CSS-CCCHHHHHHHHHHHHH---HHCCCEEEEE
T ss_pred CCC-CCCHHHHHHHHHHHHH---hCCCCEEEEE
Confidence 542 2244566666666654 45789998 5
No 210
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=52.34 E-value=1.5e+02 Score=29.12 Aligned_cols=94 Identities=15% Similarity=0.045 Sum_probs=56.7
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .|||++. |=- +..+..++-..+-+.+++.++ -..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 39 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---------~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 39 QFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHVG---------CVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CCCHHHHHHHHHHHHhCCC
Confidence 334443 5999984 222 223444554455555555443 2579988 65 334455655444 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 108 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 108 DAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999997443333335677888999988876
No 211
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=52.07 E-value=78 Score=33.24 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=50.1
Q ss_pred Cce-EEEeecChHhHhhHHHHHHh-----CCEEEEeCC-----CC---cCCCC-c--hhHHHHHHHHHHHHHHc---CCc
Q 036921 250 QTQ-IFAKIENIEGLTHFDEILQA-----ADGIILSRG-----NL---GIDLP-P--EKVFLFQKAALYKCNMA---GKP 309 (527)
Q Consensus 250 ~~~-IiaKIEt~~av~nldeI~~~-----sDgImIaRg-----DL---g~e~~-~--~~v~~~qk~Ii~~c~~~---gKp 309 (527)
+.+ |+.||=--...+++.+|++. .|||.+.-+ |+ ..+.+ + ..+....-++++..+++ ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 456 89999322122355555554 499988543 21 11111 1 11122233455555444 799
Q ss_pred EEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCc
Q 036921 310 AVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAE 349 (527)
Q Consensus 310 vi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~E 349 (527)
+|. ..+- ...|+..++..|||+|++..-
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEESHH
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEcHH
Confidence 998 6542 345778888899999999733
No 212
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=52.06 E-value=85 Score=31.03 Aligned_cols=89 Identities=16% Similarity=0.168 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE
Q 036921 232 AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV 311 (527)
Q Consensus 232 ~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi 311 (527)
.+.++.++++..+.| +.+++-+-....++-+.+ ..|.+-||-+++- ..+ +++++.+.||||+
T Consensus 75 ~~gl~~l~~~~~~~G----lp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~ 136 (292)
T 1o60_A 75 EEGLKIFQELKDTFG----VKIITDVHEIYQCQPVAD---VVDIIQLPAFLAR------QTD-----LVEAMAKTGAVIN 136 (292)
T ss_dssp HHHHHHHHHHHHHHC----CEEEEECCSGGGHHHHHT---TCSEEEECGGGTT------CHH-----HHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHcC----CcEEEecCCHHHHHHHHh---cCCEEEECccccc------CHH-----HHHHHHcCCCcEE
Confidence 456777777777655 789998888887766655 5799999976653 222 5666668899999
Q ss_pred E-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEe
Q 036921 312 V-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILL 346 (527)
Q Consensus 312 ~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imL 346 (527)
+ |.|- -|-.|+.+.+..+. .|.+-++|
T Consensus 137 lk~G~~--------~t~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 137 VKKPQF--------LSPSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp EECCTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred EeCCCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 9 8752 24567777777654 57643333
No 213
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=51.70 E-value=1.7e+02 Score=28.30 Aligned_cols=116 Identities=11% Similarity=0.108 Sum_probs=70.3
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++.+ . |..+....+...-..|++.+...++. ..-++.+...++.++ +..+.-
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~----~~~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER----RMLAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT----HHHHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC----CHHHHHHHHHHHHhc-CCCEeC
Confidence 467778999999886 2 11111233444555699988766432 134677666666554 222111
Q ss_pred hhhhhhhhcccCCCCChHH--H-HHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTHLE--S-IASSAVRAAIKVK--ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~--~-ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
. .| .++.. . ....+.++..+++ .+.||+.+-+|.++.-+++ ..|...|+++.+
T Consensus 140 ~-~~----------~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~ 201 (304)
T 1ve1_A 140 D-QF----------KNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEP 201 (304)
T ss_dssp C-TT----------TCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred C-CC----------CChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEec
Confidence 0 01 12221 2 2334567777764 7999999999999777665 469999999854
No 214
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=51.70 E-value=1e+02 Score=30.13 Aligned_cols=89 Identities=10% Similarity=0.151 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE
Q 036921 232 AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV 311 (527)
Q Consensus 232 ~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi 311 (527)
.+.++.++++..+.| +.+++-+=....++-+.+. .|.+-||-+++- ..+ +++++.+.||||+
T Consensus 72 ~~gl~~l~~~~~~~G----l~~~te~~d~~~~~~l~~~---~d~~kIga~~~~------n~~-----ll~~~a~~~kPV~ 133 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFG----IPVITDVHEPHQCQPVAEV---CDVIQLPAFLAR------QTD-----LVVAMAKTGNVVN 133 (280)
T ss_dssp HHHHHHHHHHHHHHC----CCEEEECCSGGGHHHHHHH---CSEEEECGGGTT------BHH-----HHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcC----CcEEEecCCHHHHHHHHhh---CCEEEECccccc------CHH-----HHHHHHcCCCcEE
Confidence 456777777776655 7899988888877666654 799999866553 333 5566668899999
Q ss_pred E-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEe
Q 036921 312 V-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILL 346 (527)
Q Consensus 312 ~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imL 346 (527)
+ |.|- -|-.|+.+.+..+. .|.+-++|
T Consensus 134 lk~G~~--------~t~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 134 IKKPQF--------LSPSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp EECCTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred EECCCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 9 8752 24567777776654 57643444
No 215
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=51.35 E-value=86 Score=31.17 Aligned_cols=94 Identities=13% Similarity=0.186 Sum_probs=58.6
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +--|.++=.++-+. .+..+ .+++||+-+= |.++++.....-+. +||+|+.+-.
T Consensus 50 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~--grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 127 (315)
T 3si9_A 50 EWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA--KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPY 127 (315)
T ss_dssp HHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC--CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 47789999999853 23344554444443 44444 5788998883 55666555555444 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.. ..+.+.+...-+.|.+ +.+.|+++ .
T Consensus 128 y~-~~~~~~l~~~f~~va~---a~~lPiilYn 155 (315)
T 3si9_A 128 YN-RPNQRGLYTHFSSIAK---AISIPIIIYN 155 (315)
T ss_dssp SS-CCCHHHHHHHHHHHHH---HCSSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHHHH---cCCCCEEEEe
Confidence 43 2344555555555554 45899998 5
No 216
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=51.35 E-value=18 Score=34.56 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
-..+++.++++|++|.+ |-- . .+ -+..++..++..|+|+|+- .||..+.+++.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv~--~-----~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMPW--I-----FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECCT--T-----CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeCC--C-----CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36789999999999999 830 0 11 1223455667789999886 599999998887774
No 217
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=51.18 E-value=23 Score=29.73 Aligned_cols=40 Identities=25% Similarity=0.278 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCCcEEEEECCC---------cHHHHHHHhhCCCCCEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTSS---------GRAARLIAKYRPTMPVLS 437 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~s---------G~tA~~is~~RP~~PIiA 437 (527)
.+...++.|.+.+++.||+-++. |.++..+.+.-| |||+.
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlv 146 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLV 146 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEE
Confidence 34556677888999999887753 788888888776 99985
No 218
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=50.81 E-value=62 Score=32.10 Aligned_cols=155 Identities=19% Similarity=0.131 Sum_probs=85.3
Q ss_pred HhHhhHHHHHH----hCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH
Q 036921 261 EGLTHFDEILQ----AADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN 335 (527)
Q Consensus 261 ~av~nldeI~~----~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n 335 (527)
.+++++++.+. .+|+|++-+|=+. ..... ..++|.|+ ...=+|+-.+ .+...-...+-.
T Consensus 70 ~gl~~~~~~i~~l~~g~dav~~~~G~~~-------------~~~~~--~~~~~lil~l~~~t~~~~~-~~~~~l~~~ve~ 133 (295)
T 3glc_A 70 TGLERIDINIAPLFEHADVLMCTRGILR-------------SVVPP--ATNRPVVLRASGANSILAE-LSNEAVALSMDD 133 (295)
T ss_dssp TTCTTHHHHTGGGGGGCSEEEECHHHHH-------------HHSCG--GGCCCEEEECEECCCTTSC-TTCCEECSCHHH
T ss_pred CchhhhHHHHHHhhcCCCEEEECHhHHh-------------hhccc--cCCccEEEEEcCCCcCCCC-CccchhHHHHHH
Confidence 35555554443 3699998654321 11111 24788888 5544445332 222333367888
Q ss_pred HHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEE
Q 036921 336 AVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIIC 415 (527)
Q Consensus 336 av~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv 415 (527)
|+..|+|+|-+..-.- ..+..+.++.+.+++++++.+- -...... ...... .... .+...++++|.+++|+.|-+
T Consensus 134 Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~G-lpvIie~-~~G~~~-~~d~-e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 134 AVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVG-MPTMAVT-GVGKDM-VRDQ-RYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTT-CCEEEEE-CC-----CCSH-HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcC-CEEEEEC-CCCCcc-CCCH-HHHHHHHHHHHHhCCCEEEe
Confidence 9999999998853322 3455678888888888887641 0000000 000000 1122 33345778999999996544
Q ss_pred ECCCcHHHHHHHhhCCCCCEEEE
Q 036921 416 FTSSGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 416 ~T~sG~tA~~is~~RP~~PIiAv 438 (527)
+.+|.+-+.+...- ++||++.
T Consensus 209 -~~t~e~~~~vv~~~-~vPVv~~ 229 (295)
T 3glc_A 209 -YYVEKGFERIVAGC-PVPIVIA 229 (295)
T ss_dssp -ECCTTTHHHHHHTC-SSCEEEE
T ss_pred -CCCHHHHHHHHHhC-CCcEEEE
Confidence 34454444444332 4899875
No 219
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=50.57 E-value=22 Score=33.52 Aligned_cols=120 Identities=11% Similarity=0.053 Sum_probs=59.9
Q ss_pred hcccccccEEEe-----cCCCCHHHHHHHHHHHHHcCCCCCceEEEe--ecChHhHhhHHHHHHh-CCEEEEeCCCCcCC
Q 036921 215 WGVQNKIDFLSL-----SYTRHAEDVRQAREYLSKLGDLSQTQIFAK--IENIEGLTHFDEILQA-ADGIILSRGNLGID 286 (527)
Q Consensus 215 ~~~~~g~d~I~~-----sfV~s~~dv~~lr~~l~~~~~~~~~~IiaK--IEt~~av~nldeI~~~-sDgImIaRgDLg~e 286 (527)
...+.|+|+|-+ .|+....+ ..++++... .+++++.. |.+++ .+++.++. +|+|.+++..|.-
T Consensus 40 ~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~----~~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~~- 110 (244)
T 1vzw_A 40 AWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQA----MDIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALET- 110 (244)
T ss_dssp HHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHH----CSSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC-
T ss_pred HHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHh----cCCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhhC-
Confidence 457899999987 34455544 444444333 24566664 66654 35555555 6999998655421
Q ss_pred CCchhHHHHHHHHHHHHHHcCCcEEE-ecchh-h-hhcCC---CCChHhhhhHHHHHHhCCcEEEeCCccccCC
Q 036921 287 LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVD-S-MTDNL---RPTRAEATDVANAVLDGSDAILLGAETLRGL 354 (527)
Q Consensus 287 ~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~Le-S-M~~~p---~PtraEv~Dv~nav~~g~D~imLs~Eta~G~ 354 (527)
| ..+.+..+..|..+++ -.... . .++.- .++..| .+..+...|+|.+.+++-+.-|.
T Consensus 111 ------p---~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~ 173 (244)
T 1vzw_A 111 ------P---EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGT 173 (244)
T ss_dssp ------H---HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC-----
T ss_pred ------H---HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCcccc
Confidence 1 2333344445544443 22110 0 01100 012222 23445567999998876555443
No 220
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=50.52 E-value=68 Score=31.65 Aligned_cols=124 Identities=10% Similarity=0.007 Sum_probs=69.3
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhcc
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVF 374 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~ 374 (527)
-.-+...|+..|.|+.+ .- +.+ .| ...+...-..|++.+...++... .++.++.+...+++++-...+
T Consensus 84 g~alA~~a~~~G~~~~iv~p--~~~----~~----~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~ 152 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILVLR--GKE----EL----KGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPY 152 (325)
T ss_dssp HHHHHHHHHHTTCEEEEEEE--SCC----CS----CHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEE
T ss_pred HHHHHHHHHHhCCcEEEEEC--CCC----CC----CchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceE
Confidence 34567889999999876 21 011 01 12233444579998877644311 112345555554433211111
Q ss_pred chhhhhhhhhcccCCCCCh--HHHHHHHHHHHHHhc--CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 375 NQDLYFKKTVKCVGEPMTH--LESIASSAVRAAIKV--KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~--~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
.....+. ++ .+.....+.++.+++ +.+.||+..-+|.|+.-+++ ..|.+.|+++-+
T Consensus 153 ~~p~~~~----------n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~ 216 (325)
T 1j0a_A 153 VIPPGGA----------SPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAV 216 (325)
T ss_dssp EECGGGC----------SHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEcCCCC----------CHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence 1111111 11 122234567777776 47999999999999776665 579999999843
No 221
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=50.10 E-value=63 Score=33.27 Aligned_cols=154 Identities=9% Similarity=0.084 Sum_probs=86.8
Q ss_pred hhHHHHHhhcccc-cccEEEecC-------CCCHHHHHHHHHHHHHcCCCCCceEEEe--e---------cChHhHhhHH
Q 036921 207 KDKEVISSWGVQN-KIDFLSLSY-------TRHAEDVRQAREYLSKLGDLSQTQIFAK--I---------ENIEGLTHFD 267 (527)
Q Consensus 207 ~D~~di~~~~~~~-g~d~I~~sf-------V~s~~dv~~lr~~l~~~~~~~~~~IiaK--I---------Et~~av~nld 267 (527)
.|...|. .+.+. |+++|-++- +-+.+++.++++.+.+.| -.+..+.- + +..+.++++.
T Consensus 31 ~d~~~L~-~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~G--L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k 107 (386)
T 3bdk_A 31 KDPVTLE-EIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAG--LEITVIESIPVHEDIKQGKPNRDALIENYK 107 (386)
T ss_dssp TCSSCHH-HHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTT--CEEEEEECCCCCHHHHTTCTTHHHHHHHHH
T ss_pred CCHHHHH-HHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcC--CEEEEEeccccccccccCcHHHHHHHHHHH
Confidence 4444554 45689 999998762 557799999999999877 22222210 1 1245677777
Q ss_pred HHHHhC-----CEEEE--------eCCCCc----------------------------C---------------------
Q 036921 268 EILQAA-----DGIIL--------SRGNLG----------------------------I--------------------- 285 (527)
Q Consensus 268 eI~~~s-----DgImI--------aRgDLg----------------------------~--------------------- 285 (527)
+.++.+ ..|.. +|.||. .
T Consensus 108 ~~i~~aa~lGi~~v~~nf~p~~~w~rt~~~~~~~~G~~~~~f~~~~~~~~d~~~~~~~~pg~~~~~~~~~~~~~~~~y~~ 187 (386)
T 3bdk_A 108 TSIRNVGAAGIPVVCYNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVADDLNLPGWDSSYSKEEMKAIIENYRQ 187 (386)
T ss_dssp HHHHHHHTTTCCEEEECCCSSCSCCCSEEEEECTTSCEEEEEEGGGGSSCCC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCcccccccccccccccCCCccccccchhhhhcccchhhccCCCCccccccHHHHHHHHhhhcc
Confidence 777653 44432 255442 0
Q ss_pred CCC----chhHHHHHHHHHHHHHHcCCcEEE-ec-chhhh--hcCCCCChHhhhhHHHHHHhCCcEEEeCCcc--cc-CC
Q 036921 286 DLP----PEKVFLFQKAALYKCNMAGKPAVV-TR-VVDSM--TDNLRPTRAEATDVANAVLDGSDAILLGAET--LR-GL 354 (527)
Q Consensus 286 e~~----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq-~LeSM--~~~p~PtraEv~Dv~nav~~g~D~imLs~Et--a~-G~ 354 (527)
.++ ++.+.+.-++++..|.++|..+.+ .. --.+. ..+..-|.+++..+.+.+-.-.=+++|..-+ +. |.
T Consensus 188 ~~~~e~~w~~l~~~L~~i~~~Aee~GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll~~vdsp~~gl~lDtG~l~~~~~~ 267 (386)
T 3bdk_A 188 NISEEDLWANLEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYDSEHNGITMCVGSYASDPKN 267 (386)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHSSSCEEEECCCSSSSCCTTCCCCCCSHHHHHHHHHTTCSTTEEEEEEHHHHHTSTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCcccccccCCceeCCHHHHHHHHHhcCCCCEEEEEccCchhhcCCC
Confidence 122 235556678999999999998876 42 00000 0112346677777777663223355553110 22 56
Q ss_pred ChHHHHHHH
Q 036921 355 YPVETISIV 363 (527)
Q Consensus 355 yP~e~V~~~ 363 (527)
.|.+.++..
T Consensus 268 D~~~~i~~~ 276 (386)
T 3bdk_A 268 DVLAMTEYA 276 (386)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 666665543
No 222
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=49.90 E-value=1.2e+02 Score=29.59 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=60.4
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|++++. +.-|.++=.++-+. .+..+ .+++||+-+= |.++++....--+. +||+|+.+-.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 105 (289)
T 2yxg_A 28 NFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN--GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPY 105 (289)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 47789999998863 34455555555444 33444 5789999984 36666665555544 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.|. .+.+.|+++ .
T Consensus 106 y~~-~s~~~l~~~f~~ia---~a~~lPiilYn 133 (289)
T 2yxg_A 106 YNK-PTQEGLRKHFGKVA---ESINLPIVLYN 133 (289)
T ss_dssp SSC-CCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 432 24456665556554 455899998 5
No 223
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=49.87 E-value=2.6e+02 Score=29.89 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=61.0
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcC------------------------------CCCCceEE
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLG------------------------------DLSQTQIF 254 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~------------------------------~~~~~~Ii 254 (527)
+..|...++++.-+.|.+.-+++++++++-++.+.+++.... ....+.|+
T Consensus 232 ~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ 311 (511)
T 3gg8_A 232 SADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVIT 311 (511)
T ss_dssp SHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 678888887665567778889999999999988877653211 01233444
Q ss_pred E------eecCh-----HhHhhHHHHHHhCCEEEE----eCCCCcCCCCchhHHHHHHHHHHHHHH
Q 036921 255 A------KIENI-----EGLTHFDEILQAADGIIL----SRGNLGIDLPPEKVFLFQKAALYKCNM 305 (527)
Q Consensus 255 a------KIEt~-----~av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~c~~ 305 (527)
| +|+++ |.-+=...|+.-+|++|+ +.|+. |.+- ...+.+|+..+.+
T Consensus 312 ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~y----Pvea-V~~M~~I~~~aE~ 372 (511)
T 3gg8_A 312 ATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEF----PVIT-VETMARICYEAET 372 (511)
T ss_dssp ESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHHH-HHHHHHHHHHHHT
T ss_pred ehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCC----HHHH-HHHHHHHHHHHHh
Confidence 4 55553 444446677777899999 55654 3333 3445555555543
No 224
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=49.82 E-value=27 Score=32.74 Aligned_cols=115 Identities=6% Similarity=0.066 Sum_probs=60.3
Q ss_pred HHHHhhcccccccEEEecC--CCCHHHHHHHHHHHHHcCCCCCce--EEEe-------ecCh-------HhHhhHHHHHH
Q 036921 210 EVISSWGVQNKIDFLSLSY--TRHAEDVRQAREYLSKLGDLSQTQ--IFAK-------IENI-------EGLTHFDEILQ 271 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sf--V~s~~dv~~lr~~l~~~~~~~~~~--IiaK-------IEt~-------~av~nldeI~~ 271 (527)
+++. .+++.|+|.|.+.. ..+++.+.++.+.++ ..+. +=++ +.+. ..++.+....+
T Consensus 87 ~~~~-~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g-----~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~ 160 (244)
T 2y88_A 87 ESLA-AALATGCARVNVGTAALENPQWCARVIGEHG-----DQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS 160 (244)
T ss_dssp HHHH-HHHHTTCSEEEECHHHHHCHHHHHHHHHHHG-----GGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHH
T ss_pred HHHH-HHHHcCCCEEEECchHhhChHHHHHHHHHcC-----CCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHh
Confidence 3454 34788999998863 344444555554443 1211 1122 2222 22444555555
Q ss_pred h-CCEEEEeCCCCc---CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh---CCcE
Q 036921 272 A-ADGIILSRGNLG---IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD---GSDA 343 (527)
Q Consensus 272 ~-sDgImIaRgDLg---~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~---g~D~ 343 (527)
. .|.|++-..+.. -...++.+. ++ ++..+.|++. ..+ -+ ..|+..+... |+|+
T Consensus 161 ~G~~~i~~~~~~~~~~~~g~~~~~~~----~l---~~~~~ipvia~GGI---------~~---~~d~~~~~~~~~~Gad~ 221 (244)
T 2y88_A 161 EGCSRFVVTDITKDGTLGGPNLDLLA----GV---ADRTDAPVIASGGV---------SS---LDDLRAIATLTHRGVEG 221 (244)
T ss_dssp TTCCCEEEEETTTTTTTSCCCHHHHH----HH---HTTCSSCEEEESCC---------CS---HHHHHHHHTTGGGTEEE
T ss_pred CCCCEEEEEecCCccccCCCCHHHHH----HH---HHhCCCCEEEECCC---------CC---HHHHHHHHhhccCCCCE
Confidence 5 688877433332 122222222 22 2345899998 653 22 2455566656 9999
Q ss_pred EEeCCc
Q 036921 344 ILLGAE 349 (527)
Q Consensus 344 imLs~E 349 (527)
+|+..-
T Consensus 222 v~vG~a 227 (244)
T 2y88_A 222 AIVGKA 227 (244)
T ss_dssp EEECHH
T ss_pred EEEcHH
Confidence 999743
No 225
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=49.63 E-value=30 Score=33.80 Aligned_cols=101 Identities=12% Similarity=0.065 Sum_probs=58.3
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee---cC--------hHhHhhHHHHHHhC--C
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI---EN--------IEGLTHFDEILQAA--D 274 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI---Et--------~~av~nldeI~~~s--D 274 (527)
|.+.+.+.+.+.|++.++++-+ +.++.+.+.++....+ ++...+=| +. .+.++.+++.+... -
T Consensus 28 d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~---~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (301)
T 2xio_A 28 DLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG---MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGK 103 (301)
T ss_dssp CHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT---TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTT
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC---CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCC
Confidence 4444444567899998888744 6788887777654332 22222222 11 13355666666543 2
Q ss_pred EEEEeCCCCcCCCCc-h-hHHHHH----HHHHHHHHHcCCcEEE-ec
Q 036921 275 GIILSRGNLGIDLPP-E-KVFLFQ----KAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 275 gImIaRgDLg~e~~~-~-~v~~~q----k~Ii~~c~~~gKpvi~-Tq 314 (527)
.+-| |..|++... . .-...| +..++.|++.|+|+++ +.
T Consensus 104 ~~aI--GEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r 148 (301)
T 2xio_A 104 VVAI--GECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCR 148 (301)
T ss_dssp EEEE--EEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEE
T ss_pred eEEE--EEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 4444 556665532 1 112344 4677899999999999 74
No 226
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=49.58 E-value=1.1e+02 Score=32.96 Aligned_cols=101 Identities=22% Similarity=0.236 Sum_probs=63.6
Q ss_pred CCCC-CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcC------------------------------CCC
Q 036921 201 LPTL-SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLG------------------------------DLS 249 (527)
Q Consensus 201 lp~l-t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~------------------------------~~~ 249 (527)
+|.+ +..|...++++.-+.|.+.-+++++++++-++.+.+++.... ...
T Consensus 261 ~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~ag 340 (550)
T 3gr4_A 261 ASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAG 340 (550)
T ss_dssp ETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhC
Confidence 4443 678888887654456778888999999999998887653210 001
Q ss_pred CceEEE------eecCh-----HhHhhHHHHHHhCCEEEE----eCCCCcCCCCchhHHHHHHHHHHHHHHc
Q 036921 250 QTQIFA------KIENI-----EGLTHFDEILQAADGIIL----SRGNLGIDLPPEKVFLFQKAALYKCNMA 306 (527)
Q Consensus 250 ~~~Iia------KIEt~-----~av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~c~~~ 306 (527)
.+.|+| +|+++ |.-+=...|+.-+|++|+ +.|+. |.+- ...+.+|+..+.+.
T Consensus 341 kpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~y----Pvea-V~~M~~I~~~aE~~ 407 (550)
T 3gr4_A 341 KPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDY----PLEA-VRMQHLIAREAEAA 407 (550)
T ss_dssp CCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHHH-HHHHHHHHHHHHHT
T ss_pred CCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCC----HHHH-HHHHHHHHHHHhhc
Confidence 233444 56553 333335667777899999 66654 3433 34556666666543
No 227
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=49.56 E-value=1.2e+02 Score=29.51 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=60.1
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=.++-+. .+..+ .+++||+-+= |.++++....-.+. +||+|+.+-.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (294)
T 2ehh_A 28 EFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA--GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPY 105 (294)
T ss_dssp HHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 4778999999887 334555555555444 33444 5788999884 36666665555443 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.| |.+.+.|+++ .
T Consensus 106 y~~-~s~~~l~~~f~~v---a~a~~lPiilYn 133 (294)
T 2ehh_A 106 YNK-PTQRGLYEHFKTV---AQEVDIPIIIYN 133 (294)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHCCSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 432 2445555555555 4556899998 5
No 228
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=49.51 E-value=34 Score=35.72 Aligned_cols=102 Identities=17% Similarity=0.047 Sum_probs=59.0
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCC---------------------HHHHHHHHHHHHHcCCCCCceEEEe--ec
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRH---------------------AEDVRQAREYLSKLGDLSQTQIFAK--IE 258 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s---------------------~~dv~~lr~~l~~~~~~~~~~IiaK--IE 258 (527)
|.+++.|..++.+.+.+.|+|+|.++.--. +..++.++++-+..+ .++.||+- |.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~--~~iPIIg~GGI~ 355 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTN--KQIPIIASGGIF 355 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTT--TCSCEEECSSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhC--CCCCEEEECCCC
Confidence 457877777776677889999999986321 111233333322223 46777763 44
Q ss_pred ChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCc
Q 036921 259 NIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKP 309 (527)
Q Consensus 259 t~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKp 309 (527)
|.+-+ .+-|..=+|+|+|+|+=+.- |+.-+..+.+.+-+...+.|..
T Consensus 356 s~eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 356 SGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp SHHHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred CHHHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 44333 22333347999999985521 2334445556666666666643
No 229
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=49.51 E-value=31 Score=35.03 Aligned_cols=48 Identities=10% Similarity=0.115 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCeEEeecCCC------CHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWG------NTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg------~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+..+++.+.|.+.+.|++.|+ ..+.-.+.++.+|++ .|..+.|++|..
T Consensus 155 ~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a---~g~d~~l~vDan 208 (382)
T 1rvk_A 155 RFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREA---VGPDIRLMIDAF 208 (382)
T ss_dssp HHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHH---HCTTSEEEEECC
T ss_pred HHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 345667889999999999997 677777777777776 344455566653
No 230
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=49.45 E-value=1.1e+02 Score=28.43 Aligned_cols=92 Identities=10% Similarity=-0.027 Sum_probs=58.2
Q ss_pred HHHHHhhcccccccEEEecCC-----CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhC-----CEEEE
Q 036921 209 KEVISSWGVQNKIDFLSLSYT-----RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAA-----DGIIL 278 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV-----~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~s-----DgImI 278 (527)
..+..+.+.+.|+|+|=+... .+.+++.++++.+.+.| -.+..+.-- ....++.+.+.++.+ +.|.+
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~g--l~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHK--VTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTT--CEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcC--CeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEe
Confidence 333334678999999987643 37889999999999887 222221111 013444555555443 67776
Q ss_pred eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ec
Q 036921 279 SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 279 aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq 314 (527)
.+| . ..-+++...|+++|..+.+ +.
T Consensus 109 ~p~-------~----~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 109 VPN-------Y----ELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp EEC-------G----GGHHHHHHHHHHHTCEEEEECC
T ss_pred cCC-------H----HHHHHHHHHHHHcCCEEEEecC
Confidence 554 2 2346788999999998777 44
No 231
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=49.26 E-value=88 Score=31.14 Aligned_cols=120 Identities=13% Similarity=0.082 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhc
Q 036921 295 FQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKV 373 (527)
Q Consensus 295 ~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~ 373 (527)
.=.-+...|+..|.|+.+ - |..+....+...-..|++.+...++. . .-++++...++.++-+..
T Consensus 83 ~g~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~ 147 (334)
T 3tbh_A 83 TGVSLAHLGAIRGYKVIITM-----------PESMSLERRCLLRIFGAEVILTPAAL---G-MKGAVAMAKKIVAANPNA 147 (334)
T ss_dssp HHHHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---C-chHHHHHHHHHHHhCCCE
Confidence 335677888999999886 2 22222234455556799988876442 1 245665555554332111
Q ss_pred cchhhhhhhhhcccCCCCChHH---HHHHHHHHHHHhc--CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 374 FNQDLYFKKTVKCVGEPMTHLE---SIASSAVRAAIKV--KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~---~ia~~av~~a~~~--~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
+ |-..| .++.. -....+.++..++ ..+.|||.+-+|.+..-+++ ..|.+.|+++-+
T Consensus 148 ~-~i~~~----------~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~ 212 (334)
T 3tbh_A 148 V-LADQF----------ATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEP 212 (334)
T ss_dssp E-ECCTT----------TCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred E-ECCcc----------CChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEee
Confidence 1 11111 11211 1123456677776 47999999999998766655 479999999843
No 232
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=49.21 E-value=52 Score=31.74 Aligned_cols=124 Identities=14% Similarity=0.066 Sum_probs=70.3
Q ss_pred hcccccccEEEecCC-CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH-hCCEEEEeCCCCcC-CCCchh
Q 036921 215 WGVQNKIDFLSLSYT-RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ-AADGIILSRGNLGI-DLPPEK 291 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV-~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~-~sDgImIaRgDLg~-e~~~~~ 291 (527)
.+...|+|+|.+.-. -+ ++++++.+.....| +..+.-+.+.+-+ +..++ -+|.|-+..-+|.. +.+++.
T Consensus 123 ~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG----l~~lvev~~~~E~---~~a~~~gad~IGvn~~~l~~~~~dl~~ 194 (254)
T 1vc4_A 123 EARAFGASAALLIVALLG-ELTGAYLEEARRLG----LEALVEVHTEREL---EIALEAGAEVLGINNRDLATLHINLET 194 (254)
T ss_dssp HHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT----CEEEEEECSHHHH---HHHHHHTCSEEEEESBCTTTCCBCTTH
T ss_pred HHHHcCCCEEEECccchH-HHHHHHHHHHHHCC----CeEEEEECCHHHH---HHHHHcCCCEEEEccccCcCCCCCHHH
Confidence 367999999987422 12 45555544443545 3344444444323 23333 24888887766541 112222
Q ss_pred HHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHH
Q 036921 292 VFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIV 363 (527)
Q Consensus 292 v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~ 363 (527)
. +++....... ++|++. .. .-|. .|+..... |+|+++...--..+..|.++++-|
T Consensus 195 ~----~~L~~~i~~~~~~~~vIAegG---------I~s~---~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 195 A----PRLGRLARKRGFGGVLVAESG---------YSRK---EELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp H----HHHHHHHHHTTCCSEEEEESC---------CCSH---HHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred H----HHHHHhCccccCCCeEEEEcC---------CCCH---HHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 2 2333333333 678876 44 2333 45666677 999999976666778888887654
No 233
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=49.12 E-value=82 Score=30.96 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
-+..++.|+++|++|.+ |- + +-.++..++..|+|+|+- +||-.+.+.+.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WTV--n-----------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWTV--N-----------EPEDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBCC--C-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEcC--C-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 46889999999999999 82 1 223556677789999986 599887777653
No 234
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=49.01 E-value=1.3e+02 Score=30.07 Aligned_cols=93 Identities=18% Similarity=0.181 Sum_probs=60.2
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
+|.++.|+|+|++. +.-|.++=.++-+. ....+ .+++||+-+= |.++++....-.+. +||+|+.+-.
T Consensus 62 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~--grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 139 (332)
T 2r8w_A 62 ARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR--GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVS 139 (332)
T ss_dssp HHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 47789999998863 34555555555444 44444 5789999884 36677665555544 5999997655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
+.- .+.+.+...-+.|. .+.+.|+++
T Consensus 140 Y~~-~s~~~l~~~f~~VA---~a~~lPiil 165 (332)
T 2r8w_A 140 YTP-LTQEEAYHHFAAVA---GATALPLAI 165 (332)
T ss_dssp SSC-CCHHHHHHHHHHHH---HHCSSCEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhcCCCEEE
Confidence 432 34456665656554 455899998
No 235
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=49.00 E-value=1.7e+02 Score=29.31 Aligned_cols=149 Identities=16% Similarity=0.180 Sum_probs=89.0
Q ss_pred HhhHHHHHhhcccccccE--EEecCCCCHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHhC----CEEEE
Q 036921 206 DKDKEVISSWGVQNKIDF--LSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQAA----DGIIL 278 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~--I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~s----DgImI 278 (527)
..+-+.++ .+++.|++. ++-|--.. ...++-.+..+.| ..++++ ..+.+-+..+-+.+... +-|++
T Consensus 141 T~~~eV~e-aAleagag~~~lINsv~~~--~~~~m~~laa~~g----~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIl 213 (323)
T 4djd_D 141 EKDHEVLE-AVAEAAAGENLLLGNAEQE--NYKSLTAACMVHK----HNIIARSPLDINICKQLNILINEMNLPLDHIVI 213 (323)
T ss_dssp HHHHHHHH-HHHHHTTTSCCEEEEEBTT--BCHHHHHHHHHHT----CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CCCHHHHH-HHHHhcCCCCCeEEECCcc--cHHHHHHHHHHhC----CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEE
Confidence 56777775 788888762 33332221 2234444555554 355554 32334444444444443 45899
Q ss_pred eCCCCcCCCCchhHHHHHHHHHHHH----HHcCCcEEEecchhhhhcC-------------CCCChH---hhhhHHHHHH
Q 036921 279 SRGNLGIDLPPEKVFLFQKAALYKC----NMAGKPAVVTRVVDSMTDN-------------LRPTRA---EATDVANAVL 338 (527)
Q Consensus 279 aRgDLg~e~~~~~v~~~qk~Ii~~c----~~~gKpvi~Tq~LeSM~~~-------------p~Ptra---Ev~Dv~nav~ 338 (527)
.+|=.....+.+.-....+++=..+ +..|-|+++.-=-+||+.+ +...|. |+.-.+..+.
T Consensus 214 DPg~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvSrksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~ 293 (323)
T 4djd_D 214 DPSIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVGYEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQ 293 (323)
T ss_dssp ECCCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHHHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHT
T ss_pred eCCCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecchhhhhhccccccccccccccccchhhHHHHHHHHHHHHH
Confidence 9988766677777767776665543 4689999872112455543 122233 3444455778
Q ss_pred hCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 339 DGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 339 ~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
.|+|.++|. +| ++|+++++.+.+
T Consensus 294 ~~~~i~v~~-------~p-~~~~~~~~~~~~ 316 (323)
T 4djd_D 294 AGAHILLMR-------HP-EAVARVKENIDQ 316 (323)
T ss_dssp TTCSEEEEC-------CH-HHHHHHHHHHHH
T ss_pred hcCCEEEEc-------CH-HHHHHHHHHHHH
Confidence 999999997 55 678888887654
No 236
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=48.70 E-value=20 Score=35.05 Aligned_cols=52 Identities=15% Similarity=0.184 Sum_probs=36.3
Q ss_pred CHHHHHHHHHcCCCeEEeecCCC---------CH-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSWG---------NT-EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~shg---------~~-e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
+.+.++.|.+.|+|++||-++.. .. +...+.++++=+.+.+.| +.+++|+-.
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~g--i~vild~h~ 94 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--AYAVVDPHN 94 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEeccc
Confidence 48899999999999999988632 11 334455555555555566 678889874
No 237
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=48.70 E-value=64 Score=32.03 Aligned_cols=97 Identities=10% Similarity=0.121 Sum_probs=61.8
Q ss_pred HHHHhhcccccccEEEecC------CCCHHHHHHHHHHH-HHcCCCCCceEEEee---cChHhHhhHHHHHHh-C-CEEE
Q 036921 210 EVISSWGVQNKIDFLSLSY------TRHAEDVRQAREYL-SKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-A-DGII 277 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sf------V~s~~dv~~lr~~l-~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-s-DgIm 277 (527)
+.+ ++.++.|+|+|++.- --|.++=+++-+.. +..+ .+++||+-+ -+.++++.....-+. + ||+|
T Consensus 32 ~lv-~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--grvpViaGvg~~~t~~ai~la~~A~~~Ga~davl 108 (311)
T 3h5d_A 32 ALI-EHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN--GRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGL 108 (311)
T ss_dssp HHH-HHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC--SSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEE
T ss_pred HHH-HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEE
Confidence 344 477899999988643 23455555554444 4444 678899888 366777777676664 4 9999
Q ss_pred EeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 278 LSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 278 IaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
+.+-...- .+.+.+...-+.|. .+.+.|+++ .
T Consensus 109 v~~P~y~~-~s~~~l~~~f~~va---~a~~lPiilYn 141 (311)
T 3h5d_A 109 AIVPYYNK-PSQEGMYQHFKAIA---DASDLPIIIYN 141 (311)
T ss_dssp EECCCSSC-CCHHHHHHHHHHHH---HSCSSCEEEEE
T ss_pred EcCCCCCC-CCHHHHHHHHHHHH---HhCCCCEEEEe
Confidence 97655432 24455555555554 445899998 5
No 238
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=48.61 E-value=2.3e+02 Score=29.84 Aligned_cols=151 Identities=17% Similarity=0.064 Sum_probs=92.5
Q ss_pred CCCHhhHHHHHhhcccccccEEEecC----CC-----CHHHHHHHHHHHHHcCCCCCceEEEeec--ChHhHh-------
Q 036921 203 TLSDKDKEVISSWGVQNKIDFLSLSY----TR-----HAEDVRQAREYLSKLGDLSQTQIFAKIE--NIEGLT------- 264 (527)
Q Consensus 203 ~lt~~D~~di~~~~~~~g~d~I~~sf----V~-----s~~dv~~lr~~l~~~~~~~~~~IiaKIE--t~~av~------- 264 (527)
.++..|+..|.....+.|++.|=+-+ +. ++++.+.++.+-.. . .++++.+-+- +..|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~--~~~~l~~l~R~~N~~G~~~~~ddv~ 102 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-M--PNTPLQMLLRGQNLLGYRHYADDVV 102 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-C--SSSCEEEEECGGGTTSSSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-C--CCCeEEEEeccccccCcccccchhh
Confidence 35666665554455678999887753 11 45555555554332 2 3455555542 222321
Q ss_pred --hHHHHHHh-CCEEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHH-HHH
Q 036921 265 --HFDEILQA-ADGIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVAN-AVL 338 (527)
Q Consensus 265 --nldeI~~~-sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~n-av~ 338 (527)
+++..++. .|.|=| +-.|+ ...+..++.|+++|+.+..+ + |+...+.=+...+.+++. +..
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~----------~ni~~~i~~ak~~G~~v~~~-i--~~~~~~~~~~e~~~~~a~~l~~ 169 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDV----------RNMQQALQAVKKMGAHAQGT-L--CYTTSPVHNLQTWVDVAQQLAE 169 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEE-E--ECCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHH----------HHHHHHHHHHHHCCCEEEEE-E--EeeeCCCCCHHHHHHHHHHHHH
Confidence 23444433 375444 33333 23467899999999987651 1 333344446677777776 567
Q ss_pred hCCcEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 339 DGSDAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 339 ~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
.|+|.|.|. +|+=+-.|-++-+.+..+.++.
T Consensus 170 ~Gad~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 170 LGVDSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp TTCSEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 799999997 7877788999999888887654
No 239
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=48.48 E-value=88 Score=31.53 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=60.9
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +.-|.++=.++-+.. +..+ .+++||+-+= |.++++......+. +||+|+.+-.
T Consensus 59 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~--grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 136 (343)
T 2v9d_A 59 DDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD--RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPY 136 (343)
T ss_dssp HHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 47789999998873 445555555554443 3444 5788999884 46667665555544 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.|. .+.+.|+++ .
T Consensus 137 Y~~-~s~~~l~~~f~~VA---~a~~lPiilYn 164 (343)
T 2v9d_A 137 YWK-VSEANLIRYFEQVA---DSVTLPVMLYN 164 (343)
T ss_dssp SSC-CCHHHHHHHHHHHH---HTCSSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 432 24456655555554 456899998 5
No 240
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=48.39 E-value=38 Score=28.18 Aligned_cols=41 Identities=29% Similarity=0.301 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCcEEEEECCC---------cHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTSS---------GRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~s---------G~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++. |.++..+.+.- +|||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 44556677889999999998763 67888888775 5999965
No 241
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=47.99 E-value=1.3e+02 Score=29.70 Aligned_cols=94 Identities=14% Similarity=0.130 Sum_probs=57.0
Q ss_pred hhcccccccEEEecC------CCCHHHHHHHHHH-HHHcCCCCCceEEEeec--ChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSLSY------TRHAEDVRQAREY-LSKLGDLSQTQIFAKIE--NIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~sf------V~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE--t~~av~nldeI~~~-sDgImIaRgDL 283 (527)
++.++.|+|+|++.- --|.++=+++-+. .+..+ .+++||+-+= |.++++......+. +||+|+.+-..
T Consensus 40 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~--grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 40 DRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH--GRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC--CCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 477899999988642 2245554454443 34444 6789999883 33333333333332 49999964443
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
...+.+.+...-+.|.+++ +.|+++ .
T Consensus 118 -~~~s~~~l~~~f~~va~a~---~lPiilYn 144 (316)
T 3e96_A 118 -PYVTAGGVYAYFRDIIEAL---DFPSLVYF 144 (316)
T ss_dssp -SCCCHHHHHHHHHHHHHHH---TSCEEEEE
T ss_pred -CCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 2335566666666666655 699998 5
No 242
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=47.95 E-value=28 Score=35.17 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=34.5
Q ss_pred HHHHHHHH-cCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 44 DVISGCLK-AGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 44 ~~l~~l~~-~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+..+++++ .|.+.+.+++.|++.++-.+.++.+|++. |..+.|++|.
T Consensus 148 ~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDa 195 (370)
T 1nu5_A 148 DSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDV 195 (370)
T ss_dssp HHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEEC
T ss_pred HHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---CCCCEEEEEC
Confidence 34466778 99999999999998887778888888763 3234455554
No 243
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=47.95 E-value=23 Score=37.44 Aligned_cols=50 Identities=26% Similarity=0.371 Sum_probs=40.5
Q ss_pred eEEEEecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 30 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 30 tkIi~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
-.+.+-+|+.....+.++.|+++|++++=++++||......+.++.+|+.
T Consensus 226 l~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 226 LLVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred hccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 34445677766668899999999999999999999888777777777764
No 244
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=47.91 E-value=30 Score=35.37 Aligned_cols=47 Identities=17% Similarity=0.233 Sum_probs=35.3
Q ss_pred HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 45 VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 45 ~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
..+++.+.|.+.+.|+..|++.++-.+.++.+|++ .|..+.|++|..
T Consensus 172 ~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan 218 (392)
T 1tzz_A 172 EMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEE---IGKDAQLAVDAN 218 (392)
T ss_dssp HHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHH---HTTTCEEEEECT
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHh---cCCCCeEEEECC
Confidence 34667889999999999999888777888888876 344455555553
No 245
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=47.73 E-value=26 Score=35.35 Aligned_cols=108 Identities=17% Similarity=0.220 Sum_probs=64.9
Q ss_pred HhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee--------c-ChH-hHhhHHHHHHhCCE
Q 036921 206 DKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI--------E-NIE-GLTHFDEILQAADG 275 (527)
Q Consensus 206 ~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI--------E-t~~-av~nldeI~~~sDg 275 (527)
+.|++.+.+.+.+.|++.++++-+ +.++...+.++.........+.+++-+ | +.+ .++.|.+.++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 457776666788999999888755 688888887766543200001344433 1 111 46667777765422
Q ss_pred EEEeCCCCcCCCCc-h-hHHHHH----HHHHHHHHH-cCCcEEE-ec
Q 036921 276 IILSRGNLGIDLPP-E-KVFLFQ----KAALYKCNM-AGKPAVV-TR 314 (527)
Q Consensus 276 ImIaRgDLg~e~~~-~-~v~~~q----k~Ii~~c~~-~gKpvi~-Tq 314 (527)
=++|=|..|+++.. . .-...| ++-++.|++ .++|+++ +.
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r 176 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCR 176 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 23344666666532 1 112344 466888999 9999999 74
No 246
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=47.62 E-value=59 Score=33.38 Aligned_cols=64 Identities=9% Similarity=0.082 Sum_probs=42.5
Q ss_pred CCeEEEEec-CCCCCCHHHH-----HHHHHcCCCeEEeecCCC------CHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 28 AMTKIVGTL-GPKSRSVDVI-----SGCLKAGMSVARFDFSWG------NTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 28 ~~tkIi~Ti-Gp~~~~~~~l-----~~l~~~G~~v~RiN~shg------~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+...-+|+ |.-..+++.+ +++++.|.+.+.+..... +.++-.+.++.+|++ .|..+.|++|..
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g~~~~l~vDaN 199 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LGPDAVIGFDAN 199 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HCTTCCEEEECT
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 356677887 4433455544 566788999999999654 567666666666665 454556666654
No 247
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=47.41 E-value=1.9e+02 Score=27.28 Aligned_cols=111 Identities=15% Similarity=0.070 Sum_probs=69.9
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEE--eecCh-------HhHhhHHHHHHh-CC
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFA--KIENI-------EGLTHFDEILQA-AD 274 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~Iia--KIEt~-------~av~nldeI~~~-sD 274 (527)
++.+...+.+...+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++..+. +|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-------~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad 103 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-------SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAA 103 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-------CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS
T ss_pred CcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-------CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCC
Confidence 4556666655556789998876 5889998888642 356665 32100 123445666655 59
Q ss_pred EEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 275 GIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 275 gImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
.|.+.-..+. .+ ...+.+++.++++|.+++. .. |..| ...+...|+|.+..
T Consensus 104 ~V~l~~~~~~---~p----~~l~~~i~~~~~~g~~v~~~v~-----------t~ee---a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 104 IIAVDGTARQ---RP----VAVEALLARIHHHHLLTMADCS-----------SVDD---GLACQRLGADIIGT 155 (232)
T ss_dssp EEEEECCSSC---CS----SCHHHHHHHHHHTTCEEEEECC-----------SHHH---HHHHHHTTCSEEEC
T ss_pred EEEECccccC---CH----HHHHHHHHHHHHCCCEEEEeCC-----------CHHH---HHHHHhCCCCEEEE
Confidence 9988644321 11 2456778888999999887 43 3333 35667789999963
No 248
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=47.32 E-value=1.1e+02 Score=30.01 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=52.4
Q ss_pred CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcC-CcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCcc
Q 036921 273 ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAG-KPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAET 350 (527)
Q Consensus 273 sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~g-Kpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Et 350 (527)
+|.||--....|...|+.. +...+.+.+. ... .|||+ ..+ -| -+|++.++..|+|+|++..--
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GGI---------~t---psDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAGL---------GL---PSHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESCC---------CS---HHHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCCC---------CC---HHHHHHHHHcCCCEEEEChHH
Confidence 5777664455555556655 3333333221 234 89998 553 22 357899999999999999777
Q ss_pred ccCCChHHHHHHHHHHHH
Q 036921 351 LRGLYPVETISIVGKICA 368 (527)
Q Consensus 351 a~G~yP~e~V~~~~~i~~ 368 (527)
+.++.|.+-.+.+..-++
T Consensus 211 ~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp HTSSSHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHH
Confidence 888899776666665443
No 249
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=47.23 E-value=35 Score=34.40 Aligned_cols=47 Identities=11% Similarity=0.189 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+..+++.+.|.+.+.+++.|++.++-.+.++.+|++ .|..+.|++|.
T Consensus 146 ~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g~~~~l~vDa 192 (366)
T 1tkk_A 146 ADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VGSAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HCSSSEEEEEC
T ss_pred HHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hCCCCeEEEEC
Confidence 345667889999999999998888777888888876 34334555554
No 250
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=47.20 E-value=1.6e+02 Score=28.76 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=55.0
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |=- +..+..++-..+-+.+++.++. ..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGTG---------GNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 334433 4999884 221 2234445544444555544432 478988 65 345566655554 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997443323335667788888877654
No 251
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=46.99 E-value=1.9e+02 Score=27.19 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=68.6
Q ss_pred hcccccccEEEecCCC----CHHHHHHHHHHHHHcCCCCCceEEEee------------------------cChHhHhhH
Q 036921 215 WGVQNKIDFLSLSYTR----HAEDVRQAREYLSKLGDLSQTQIFAKI------------------------ENIEGLTHF 266 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~----s~~dv~~lr~~l~~~~~~~~~~IiaKI------------------------Et~~av~nl 266 (527)
.+.+.|+|+|=+..-. +.+++.++++.+.+.| +.+.+-- +..++++.+
T Consensus 29 ~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~g----l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 104 (290)
T 3tva_A 29 VAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAG----IQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEM 104 (290)
T ss_dssp HHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTT----CEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHH
T ss_pred HHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcC----CEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 4568999998887643 4788999999999877 3333320 012455666
Q ss_pred HHHHHhC-----CEEEEeCCCCcCC--CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH
Q 036921 267 DEILQAA-----DGIILSRGNLGID--LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV 337 (527)
Q Consensus 267 deI~~~s-----DgImIaRgDLg~e--~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav 337 (527)
.+.++.+ +.|.+..|...-. -.++.+...-+++...|+++|..+.+ +.. -|..++.++...+
T Consensus 105 ~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~---------~~~~~~~~l~~~~ 174 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ---------ESADHLLEFIEDV 174 (290)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS---------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC---------CCHHHHHHHHHhc
Confidence 6666653 6777755533211 12345566667888888888887776 431 2455666666655
No 252
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=46.97 E-value=1.8e+02 Score=28.49 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=53.5
Q ss_pred CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH-HHHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA-NAVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~-nav~~g~D~imLs~ 348 (527)
.||+++. |=- +..+..++-..+-+..++.++ -..|+|. +. ..+-.|.-+.+ .|-..|+|++|+..
T Consensus 42 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 42 TDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGTG---------ANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4999984 222 233444554444555555543 2479998 65 34455555544 46678999999974
Q ss_pred ccccCCChHHHHHHHHHHHHHHh
Q 036921 349 ETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
=--...-+-+.++..+.|+..+.
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 43333335677888888887764
No 253
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=46.89 E-value=1.1e+02 Score=29.97 Aligned_cols=94 Identities=17% Similarity=0.226 Sum_probs=60.5
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=.++-+.. +..+ .+++||+-+= |.++++.....-+. +||+|+.+-.
T Consensus 28 ~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (297)
T 2rfg_A 28 DWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ--GRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGY 105 (297)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC--CCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4778999999886 3345555555554443 3444 5788999884 36666666555554 5999997655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.|. .+.+.|+++ .
T Consensus 106 y~~-~s~~~l~~~f~~va---~a~~lPiilYn 133 (297)
T 2rfg_A 106 YNR-PSQEGLYQHFKMVH---DAIDIPIIVYN 133 (297)
T ss_dssp TTC-CCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 432 24455555555554 455899998 5
No 254
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=46.63 E-value=28 Score=35.58 Aligned_cols=63 Identities=17% Similarity=0.088 Sum_probs=41.8
Q ss_pred CeEEEEecCCCCCCH----HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 29 MTKIVGTLGPKSRSV----DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~----~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+....+|+|....++ +..+++.+.|.+.+.|++.|++.+.-.+.++.+|++ .|..+.|++|..
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~~~~l~vDan 198 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VPAGSKVMIDPN 198 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SCTTCEEEEECT
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hCCCCeEEEECC
Confidence 445666765422234 345667889999999999998887767777777664 444455555553
No 255
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=45.81 E-value=1.7e+02 Score=28.49 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=54.5
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |=- +..+..++-..+-+.+++.++. ..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGAG---------SNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 5999884 222 2234444444444444544432 478988 65 344456655554 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997443323334667778888877654
No 256
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=45.79 E-value=1e+02 Score=30.77 Aligned_cols=117 Identities=11% Similarity=0.052 Sum_probs=69.5
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++++ - |..+....+...-..|++.+...++. .| -++.+...++.++....+.+
T Consensus 92 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAM-----------PSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 467788999999887 2 22122234445555699988765431 12 45666666555432221011
Q ss_pred hhhhhhhhcccCCCCChH--HH-HHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTHL--ES-IASSAVRAAIKVK--ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~--~~-ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
...| .++. .+ ....+ ++..+++ .+.|||.+-+|.++.-+++ ..|...|+++-+
T Consensus 157 ~~~~----------~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~ 218 (343)
T 2pqm_A 157 ANQF----------GNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEP 218 (343)
T ss_dssp CCTT----------TCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCC----------CChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEec
Confidence 0011 1221 11 23345 7777775 6899999999999776664 479999999854
No 257
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=45.77 E-value=1.8e+02 Score=26.77 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=25.3
Q ss_pred hhcccccccEEEecCC------CCHHHHHHHHHHHHHcC
Q 036921 214 SWGVQNKIDFLSLSYT------RHAEDVRQAREYLSKLG 246 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV------~s~~dv~~lr~~l~~~~ 246 (527)
+.+.+.|+|+|=+..- .+.+++.++++.+.+.|
T Consensus 26 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~g 64 (272)
T 2q02_A 26 RLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYG 64 (272)
T ss_dssp HHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTT
T ss_pred HHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcC
Confidence 3667899999988632 14578999999998877
No 258
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=45.62 E-value=1.6e+02 Score=29.43 Aligned_cols=94 Identities=19% Similarity=0.133 Sum_probs=55.6
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .|||++. |=- +..+..++-..+-+.+++.++. ..|||. +. ..+-+|.-+.+. |-..|+
T Consensus 62 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 62 ARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGIG---------ALRTDEAVALAKDAEAAGA 130 (332)
T ss_dssp HHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEEC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 334444 5999884 222 2234445544444555544432 489998 65 344566655554 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 131 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 131 DALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp SEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997443333334667788888877654
No 259
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=45.60 E-value=2.6e+02 Score=29.90 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=60.5
Q ss_pred CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCC------------------------------CCCceEE
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGD------------------------------LSQTQIF 254 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~------------------------------~~~~~Ii 254 (527)
+..|...++++.-+.|-+.-+++++++++-++.+.+++..... ...+.|+
T Consensus 241 ~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ 320 (520)
T 3khd_A 241 SADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIIT 320 (520)
T ss_dssp SHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 6788888876545567788889999999999998887632210 0122233
Q ss_pred E------eecChH-----hHhhHHHHHHhCCEEEE----eCCCCcCCCCchhHHHHHHHHHHHHHH
Q 036921 255 A------KIENIE-----GLTHFDEILQAADGIIL----SRGNLGIDLPPEKVFLFQKAALYKCNM 305 (527)
Q Consensus 255 a------KIEt~~-----av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~c~~ 305 (527)
| +|+++. .-+=...|+.-+|++|+ +.|+. |.+- ...+.+|+..+.+
T Consensus 321 ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~y----Pvea-V~~M~~I~~~aE~ 381 (520)
T 3khd_A 321 ATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKF----PVEA-VTIMSKICLEAEA 381 (520)
T ss_dssp CCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSC----HHHH-HHHHHHHHHHHHT
T ss_pred eehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcC----HHHH-HHHHHHHHHHHHh
Confidence 3 565533 33335667777899999 56654 3333 3455566665544
No 260
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=45.58 E-value=1.1e+02 Score=29.86 Aligned_cols=86 Identities=13% Similarity=0.110 Sum_probs=56.8
Q ss_pred HHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh--CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ec
Q 036921 238 AREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA--ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 238 lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq 314 (527)
+|+.|.+ |. ..+.+++.+.+++.++. +.. +|.+++..-|-. . +...++. .+..+...|+|+++ +.
T Consensus 30 ~k~~l~~-G~-~~~gl~~~~~~p~~~e~----a~~~GaD~v~lDlEh~~----~-~~~~~~~-~l~a~~~~~~~~~VRv~ 97 (287)
T 2v5j_A 30 FKAALKA-GR-PQIGLWLGLSSSYSAEL----LAGAGFDWLLIDGEHAP----N-NVQTVLT-QLQAIAPYPSQPVVRPS 97 (287)
T ss_dssp HHHHHHT-TC-CEEEEEECSCCHHHHHH----HHTSCCSEEEEESSSSS----C-CHHHHHH-HHHHHTTSSSEEEEECS
T ss_pred HHHHHHC-CC-cEEEEEEECCCHHHHHH----HHhCCCCEEEEeCCCcc----c-hHHHHHH-HHHHHHhcCCCEEEEEC
Confidence 6666653 31 35778999988876643 333 499999887752 2 1222222 34556667999999 76
Q ss_pred chhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 315 VVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 315 ~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
- +.. .|+..++..|+|+||+.
T Consensus 98 ~---------~d~---~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 98 W---------NDP---VQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp S---------SCH---HHHHHHHHTTCCEEEES
T ss_pred C---------CCH---HHHHHHHhCCCCEEEeC
Confidence 2 222 28888888999999997
No 261
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=45.47 E-value=22 Score=35.46 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=43.3
Q ss_pred CCCHhhHHHHHhhcccccccEEEecCCC------------------C--------HHHHHHHHHHHHHcCCCCCceEEE-
Q 036921 203 TLSDKDKEVISSWGVQNKIDFLSLSYTR------------------H--------AEDVRQAREYLSKLGDLSQTQIFA- 255 (527)
Q Consensus 203 ~lt~~D~~di~~~~~~~g~d~I~~sfV~------------------s--------~~dv~~lr~~l~~~~~~~~~~Iia- 255 (527)
.++..|...+.+.+.+.|+|+|.++.-. + .+.+.++++.+ + .++.||+
T Consensus 221 ~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~--~~ipVi~~ 295 (336)
T 1f76_A 221 DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---N--GRLPIIGV 295 (336)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---T--TSSCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---C--CCCCEEEE
Confidence 3566665554446688999999987320 1 13334444433 2 3577776
Q ss_pred -eecChHhHhhHHHHHHhCCEEEEeCCCC
Q 036921 256 -KIENIEGLTHFDEILQAADGIILSRGNL 283 (527)
Q Consensus 256 -KIEt~~av~nldeI~~~sDgImIaRgDL 283 (527)
-|.|.+-+.. -|..=+|+|++||+=|
T Consensus 296 GGI~~~~da~~--~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 296 GGIDSVIAARE--KIAAGASLVQIYSGFI 322 (336)
T ss_dssp SSCCSHHHHHH--HHHHTCSEEEESHHHH
T ss_pred CCCCCHHHHHH--HHHCCCCEEEeeHHHH
Confidence 5666554432 2223379999998744
No 262
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=45.36 E-value=36 Score=32.47 Aligned_cols=102 Identities=17% Similarity=0.224 Sum_probs=60.8
Q ss_pred cEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh--CCEEEEeCCCCcCCCCchhHHHHHHHH
Q 036921 222 DFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA--ADGIILSRGNLGIDLPPEKVFLFQKAA 299 (527)
Q Consensus 222 d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~I 299 (527)
..++.|| +.+.+..+++.. .++.+..-.+... .+..+.++. .+++-..- ..+-+..
T Consensus 145 ~vii~SF--~~~~l~~~~~~~------p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~------------~~~~~~~ 202 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKALW------PEIARGYNVSAIP--SAWQERLEHLDCAGLHIHQ------------SFFDVQQ 202 (252)
T ss_dssp CEEEEES--CHHHHHHHHHHC------TTSCEEEECSSCC--TTHHHHHHHHTCSEEEEEG------------GGCCHHH
T ss_pred CEEEEeC--CHHHHHHHHHHC------CCCcEEEEEecCc--hhHHHHHHHcCCeEEecch------------hhCCHHH
Confidence 3677777 666677776643 3344433333210 122233332 24444321 1223578
Q ss_pred HHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 300 LYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 300 i~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
++.|+++|++|.+ |- - +..++..++..|+|+|+-. ||..+.+.+.+
T Consensus 203 v~~~~~~G~~v~~WTv----------n---~~~~~~~l~~~GVdgIiTD-------~P~~~~~~l~~ 249 (252)
T 3qvq_A 203 VSDIKAAGYKVLAFTI----------N---DESLALKLYNQGLDAVFSD-------YPQKIQSAIDS 249 (252)
T ss_dssp HHHHHHTTCEEEEECC----------C---CHHHHHHHHHTTCCEEEES-------SHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEcC----------C---CHHHHHHHHHcCCCEEEeC-------CHHHHHHHHHH
Confidence 9999999999999 83 1 2345567778899999864 89887776543
No 263
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=45.29 E-value=1.3e+02 Score=29.33 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=58.7
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +.-|.++=.++-+. .+..+ .+++||+-+= |.++++....--+. +||+|+.+-.
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (292)
T 2vc6_A 28 EWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN--GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPY 105 (292)
T ss_dssp HHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 47789999999863 34555555555444 44444 5788999884 36666655555443 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
..- .+.+.+...-+.| |.+.+.|+++
T Consensus 106 y~~-~s~~~l~~~f~~i---a~a~~lPiil 131 (292)
T 2vc6_A 106 YNK-PTQEGIYQHFKAI---DAASTIPIIV 131 (292)
T ss_dssp SSC-CCHHHHHHHHHHH---HHHCSSCEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCEEE
Confidence 422 2445555555555 4456899998
No 264
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=45.28 E-value=1.2e+02 Score=29.79 Aligned_cols=121 Identities=11% Similarity=0.072 Sum_probs=69.0
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+...++. . ..++.+...+++++-...++
T Consensus 80 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~~~ 144 (322)
T 1z7w_A 80 VGLAFTAAAKGYKLIITM-----------PASMSTERRIILLAFGVELVLTDPAK---G-MKGAIAKAEEILAKTPNGYM 144 (322)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHcCCCEEEEe-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCeEe
Confidence 3466778999999887 2 11122234445555699987655321 1 23566666665443212111
Q ss_pred hhhhhhhhhcccCCCCChHHHHHHHHHHHHHhc--CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKV--KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~--~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
- ..|. .+..+..-....+.++..++ +.+.|||.+-+|.+..-+++ ..|.+.|+++-+
T Consensus 145 i-~~~~-------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 207 (322)
T 1z7w_A 145 L-QQFE-------NPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP 207 (322)
T ss_dssp C-CTTT-------CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred C-CCCC-------ChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEec
Confidence 0 0011 01011111223356677776 47999999999999776665 479999999854
No 265
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=45.24 E-value=1.9e+02 Score=28.44 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=60.4
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=.++-+.. +..+ .+++||+-+= |.++++....--+. +||+|+.+-.
T Consensus 44 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 121 (304)
T 3cpr_A 44 AYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG--DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPY 121 (304)
T ss_dssp HHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT--TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 4778899999887 3445555555554443 3444 5789999984 36666665555443 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.. ..+.+.+...-+.|. .+.+.|+++ .
T Consensus 122 y~-~~~~~~l~~~f~~ia---~a~~lPiilYn 149 (304)
T 3cpr_A 122 YS-KPSQEGLLAHFGAIA---AATEVPICLYD 149 (304)
T ss_dssp SS-CCCHHHHHHHHHHHH---HHCCSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 42 224455555555554 455899998 5
No 266
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=45.21 E-value=2.2e+02 Score=30.31 Aligned_cols=102 Identities=13% Similarity=0.113 Sum_probs=63.8
Q ss_pred cCCCC-CHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcC------------------------------CC
Q 036921 200 ELPTL-SDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLG------------------------------DL 248 (527)
Q Consensus 200 ~lp~l-t~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~------------------------------~~ 248 (527)
-+|.+ +..|...++++.-+.|-+.-+++++++++-++.+.+++.... ..
T Consensus 210 ~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~a 289 (499)
T 3hqn_D 210 FASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVA 289 (499)
T ss_dssp EETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHc
Confidence 34444 678888887654456777788999999999998877653210 00
Q ss_pred CCceEEE------eecChH-----hHhhHHHHHHhCCEEEE----eCCCCcCCCCchhHHHHHHHHHHHHHHc
Q 036921 249 SQTQIFA------KIENIE-----GLTHFDEILQAADGIIL----SRGNLGIDLPPEKVFLFQKAALYKCNMA 306 (527)
Q Consensus 249 ~~~~Iia------KIEt~~-----av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~c~~~ 306 (527)
..+.|+| +|+++. .-+=...|+.-+|++|+ +.|+. |.+- ...+.+|+..+.+.
T Consensus 290 gkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~y----Pvea-V~~m~~I~~~aE~~ 357 (499)
T 3hqn_D 290 GKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKY----PNEV-VQYMARICLEAQSA 357 (499)
T ss_dssp TCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHHH-HHHHHHHHHHHHHH
T ss_pred CCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCC----HHHH-HHHHHHHHHHHHhc
Confidence 2233443 565533 33335667777899999 66654 3433 35566666666543
No 267
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=45.18 E-value=1.9e+02 Score=28.07 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=58.5
Q ss_pred hhcccccccEEEecCCC------CHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLSYTR------HAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~------s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|++++.--. |.++=+++-+.. +..+ .+++||+-+= +.++++.....-+. +||+|+.+-.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (291)
T 3tak_A 29 EWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN--KRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPY 106 (291)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC--CCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 47789999998764322 344444444433 3444 5788998883 55666555555444 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
+. ..+.+.+...-+.|.+ +.+.|+++ .
T Consensus 107 y~-~~~~~~l~~~f~~ia~---a~~lPiilYn 134 (291)
T 3tak_A 107 YN-KPTQEGLYQHYKAIAE---AVELPLILYN 134 (291)
T ss_dssp SS-CCCHHHHHHHHHHHHH---HCCSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHHHH---hcCCCEEEEe
Confidence 43 2344566555555554 45899998 5
No 268
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=44.96 E-value=2e+02 Score=28.13 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=55.1
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .|||++. |=- +..+..++-..+-+.+++.++ -..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 44 ~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 44 AYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGVG---------TNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp HHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 5999884 222 233444554445555555443 2479988 65 345556655554 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 113 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 113 DGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997443222234667778888876654
No 269
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=44.74 E-value=1.6e+02 Score=28.70 Aligned_cols=94 Identities=15% Similarity=0.178 Sum_probs=58.3
Q ss_pred hhcccccccEEEecC------CCCHHHHHHHHHH-HHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLSY------TRHAEDVRQAREY-LSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~sf------V~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++.- --|.++=.++-+. .+..+ .+++||+-+= |.++++......+. +||+|+.+-.
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 112 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA--KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPY 112 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC--CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 477899999988742 2244444444443 34444 5788998883 55666655555444 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.. ..+.+.+...-+.|.+ +.+.|+++ .
T Consensus 113 y~-~~~~~~l~~~f~~va~---a~~lPiilYn 140 (297)
T 3flu_A 113 YN-KPSQEGIYQHFKTIAE---ATSIPMIIYN 140 (297)
T ss_dssp SS-CCCHHHHHHHHHHHHH---HCCSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHHHH---hCCCCEEEEE
Confidence 43 2244555555555544 45899998 5
No 270
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=44.54 E-value=96 Score=25.77 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=44.5
Q ss_pred HHHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCC
Q 036921 404 AAIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPA 478 (527)
Q Consensus 404 ~a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~ 478 (527)
...+...++|++-. .+|.. .+.+.+..|.+||+.++. ..+.....+ .+-.|+..++..+.
T Consensus 56 ~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~-----------~~~~~~~~~-~~~~g~~~~l~Kp~--- 120 (152)
T 3eul_A 56 LIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISA-----------HDEPAIVYQ-ALQQGAAGFLLKDS--- 120 (152)
T ss_dssp HHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEES-----------CCCHHHHHH-HHHTTCSEEEETTC---
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEc-----------cCCHHHHHH-HHHcCCCEEEecCC---
Confidence 34445678777743 34533 566777789999998853 123333333 34568888887654
Q ss_pred CCCccCHHHHHHHHHHHHHHcC
Q 036921 479 ESTNATNESVLKVALDHGKASG 500 (527)
Q Consensus 479 ~~~~~~~e~~i~~a~~~a~e~g 500 (527)
+.+.+.. ++..+.+.+
T Consensus 121 -----~~~~l~~-~i~~~~~~~ 136 (152)
T 3eul_A 121 -----TRTEIVK-AVLDCAKGR 136 (152)
T ss_dssp -----CHHHHHH-HHHHHHHCC
T ss_pred -----CHHHHHH-HHHHHHcCC
Confidence 3444443 455454444
No 271
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=44.51 E-value=35 Score=33.02 Aligned_cols=96 Identities=20% Similarity=0.313 Sum_probs=58.4
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee--------cChHhHhhHHHHHHhCCEEEEe
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI--------ENIEGLTHFDEILQAADGIILS 279 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI--------Et~~av~nldeI~~~sDgImIa 279 (527)
|+..+.+.+.+.|++.+++ -.+.++...+.++..+. ..|++-+ +..+-++.+.+.+... +|
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~-----~~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~----va 83 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAGR-----PHVWTALGFHPEVVSERAADLPWFDRYLPET----RF 83 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC-----TTEEECBCCCGGGTTTTGGGTHHHHHHGGGC----SE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC-----CCeEEEEeeCcccccccHHHHHHHHHHhhhc----cE
Confidence 5555545678899998776 35778877777655432 1233322 2223445555555432 34
Q ss_pred CCCCcCCCCch--hHHHHHH----HHHHHHHHcCCcEE-E-ec
Q 036921 280 RGNLGIDLPPE--KVFLFQK----AALYKCNMAGKPAV-V-TR 314 (527)
Q Consensus 280 RgDLg~e~~~~--~v~~~qk----~Ii~~c~~~gKpvi-~-Tq 314 (527)
=|.-|+++-.. .-...|+ +.++.|++.++|++ + +.
T Consensus 84 IGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r 126 (254)
T 3gg7_A 84 VGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSR 126 (254)
T ss_dssp EEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred EEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46777776543 2334554 67888999999999 8 74
No 272
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=44.48 E-value=35 Score=34.61 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=40.1
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 29 MTKIVGTLGPKSRSVD----VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~~----~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+.....|+|- .+++ ..+++.++|.+.+.+++.|++.+.-.+.++.+|++ .|..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LPDGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CCTTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hCCCCEEEEeC
Confidence 3555677764 2343 45667889999999999998877666777777664 44334445554
No 273
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=44.45 E-value=1.9e+02 Score=28.20 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=56.6
Q ss_pred HHHHHH-h-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHh
Q 036921 266 FDEILQ-A-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLD 339 (527)
Q Consensus 266 ldeI~~-~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~ 339 (527)
++..++ . .|||++. |=- +..+..++-..+-+..++.++. ..|+|. +. ..+-.|.-+.+. |-..
T Consensus 30 v~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQVG---------SVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---------CSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEecC---------CCCHHHHHHHHHHHHhc
Confidence 344555 3 5999984 222 1234445544555555554432 578988 65 334455555444 5667
Q ss_pred CCcEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 340 GSDAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 340 g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 99 GYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99999997443333335677888888887765
No 274
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=44.40 E-value=1.3e+02 Score=28.13 Aligned_cols=101 Identities=15% Similarity=0.170 Sum_probs=56.7
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee---c----ChHhHhhHHHHHHhCCEEEEeC
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI---E----NIEGLTHFDEILQAADGIILSR 280 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI---E----t~~av~nldeI~~~sDgImIaR 280 (527)
|.+.+.+.+.+.|++.++++-+ +.++.+.+.++....+ ++....-+ + +.+.++.+++.+...-.+-|
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~---~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~i-- 93 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS---SCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAI-- 93 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST---TEEEEECCCGGGGGGCCHHHHHHHHHHHTSTTEEEE--
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC---CEEEEEEECCcccccCCHHHHHHHHHHhcCCCeEEE--
Confidence 4444434567899998776543 5778887777665432 22211111 1 12345566666643334434
Q ss_pred CCCcCCCCch-hHHHHH----HHHHHHHHHcCCcEEE-ec
Q 036921 281 GNLGIDLPPE-KVFLFQ----KAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 281 gDLg~e~~~~-~v~~~q----k~Ii~~c~~~gKpvi~-Tq 314 (527)
|..|++.... .-...| +..++.|++.|+|+++ +.
T Consensus 94 GE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~ 133 (264)
T 1xwy_A 94 GECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCR 133 (264)
T ss_dssp EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcC
Confidence 4555554321 001333 4678999999999999 74
No 275
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=44.28 E-value=34 Score=33.37 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=35.8
Q ss_pred CCHHHHHHHHH-cCCCeEEeecCCC------CHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 41 RSVDVISGCLK-AGMSVARFDFSWG------NTEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 41 ~~~~~l~~l~~-~G~~v~RiN~shg------~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
.+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--l~vild~h~ 102 (306)
T 2cks_A 43 LTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG--LYVIVDWHI 102 (306)
T ss_dssp CSHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT--CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 35678998986 7999999988642 22224455666555566666 667888754
No 276
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=44.19 E-value=48 Score=32.12 Aligned_cols=47 Identities=15% Similarity=-0.015 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCeE--EeecCCCCHHHHHHHHHHHHHHHHHcCCceEEE
Q 036921 44 DVISGCLKAGMSVA--RFDFSWGNTEYHQETLENLKAAVKTTKKLCAVM 90 (527)
Q Consensus 44 ~~l~~l~~~G~~v~--RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~ 90 (527)
...++.++.|++.+ |+|+..++.++..+.+..+++++++++.|+-+.
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~ 144 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVE 144 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 45788999999875 888898888888888899998888888776433
No 277
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=44.18 E-value=1.7e+02 Score=28.64 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=54.8
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .|||++. |=- +..+..++-..+-+.+++.++. ..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg---------~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 40 NYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGTG---------SNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp HHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCCC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 5999984 222 2234445544445555554432 579998 65 344456655554 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 109 DAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997543333335667778888876553
No 278
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=44.18 E-value=46 Score=28.46 Aligned_cols=41 Identities=24% Similarity=0.227 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhcCCcEEEEECC---------CcHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTS---------SGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~---------sG~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++ -|.++..+.+.- +|||+.+
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv 157 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVV 157 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEE
Confidence 4455667788899999999876 377888888875 5999976
No 279
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=44.00 E-value=2e+02 Score=28.68 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=68.1
Q ss_pred CCCHhhHHHHHh-------hcccccccEEEecCC-------------CCH------------HHHHHHHHHHHHc-CCCC
Q 036921 203 TLSDKDKEVISS-------WGVQNKIDFLSLSYT-------------RHA------------EDVRQAREYLSKL-GDLS 249 (527)
Q Consensus 203 ~lt~~D~~di~~-------~~~~~g~d~I~~sfV-------------~s~------------~dv~~lr~~l~~~-~~~~ 249 (527)
.||..|++.+.+ .+.+.|+|+|=+-.- +.. .-+.++.+.+++. | .
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG--~ 218 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP--R 218 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC--T
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc--C
Confidence 588888877642 456789999876432 221 1233333333333 5 5
Q ss_pred CceEEEeecC---------h-HhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH-cCCcEEE-ecch
Q 036921 250 QTQIFAKIEN---------I-EGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNM-AGKPAVV-TRVV 316 (527)
Q Consensus 250 ~~~IiaKIEt---------~-~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~-~gKpvi~-Tq~L 316 (527)
+..|..||-- . ++++-+..+.+. .|.|-+.-|...-......-+..+-..++..++ .+.|++. ..+
T Consensus 219 d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi- 297 (349)
T 3hgj_A 219 ELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLI- 297 (349)
T ss_dssp TSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSC-
T ss_pred CceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCC-
Confidence 6678888842 1 222222222222 488888754432221100000112223333333 4899988 542
Q ss_pred hhhhcCCCCChHhhhhHHHHHHhC-CcEEEeC
Q 036921 317 DSMTDNLRPTRAEATDVANAVLDG-SDAILLG 347 (527)
Q Consensus 317 eSM~~~p~PtraEv~Dv~nav~~g-~D~imLs 347 (527)
-|. .+...++..| +|+|++.
T Consensus 298 --------~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 298 --------TTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp --------CCH---HHHHHHHHTTSCSEEEES
T ss_pred --------CCH---HHHHHHHHCCCceEEEec
Confidence 223 2345677788 9999997
No 280
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=43.96 E-value=2e+02 Score=28.44 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=74.3
Q ss_pred cccccccEEEec-CCCCH---HHHHHHHHHHHHcCCCCCceEEEeecChHh---------HhhHHHHHHh--CCEEEEeC
Q 036921 216 GVQNKIDFLSLS-YTRHA---EDVRQAREYLSKLGDLSQTQIFAKIENIEG---------LTHFDEILQA--ADGIILSR 280 (527)
Q Consensus 216 ~~~~g~d~I~~s-fV~s~---~dv~~lr~~l~~~~~~~~~~IiaKIEt~~a---------v~nldeI~~~--sDgImIaR 280 (527)
+++.|+|.|.+- |+.+. +.+++++++...... ..+++|+ |+..| +...-.++.. +|.|=...
T Consensus 134 Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~-~GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~ 210 (295)
T 3glc_A 134 AVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMK-VGMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY 210 (295)
T ss_dssp HHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHT-TTCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHH-cCCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 468888877653 44443 233333333333211 2356654 44332 2223333333 38766652
Q ss_pred CCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHH
Q 036921 281 GNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVET 359 (527)
Q Consensus 281 gDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~ 359 (527)
+.+. .+++.+.| ..||+. ...= .+++.=...+..++..|++++...........|.+.
T Consensus 211 -------t~e~----~~~vv~~~---~vPVv~~GG~~-------~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~ 269 (295)
T 3glc_A 211 -------VEKG----FERIVAGC---PVPIVIAGGKK-------LPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAM 269 (295)
T ss_dssp -------CTTT----HHHHHHTC---SSCEEEECCSC-------CCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHH
T ss_pred -------CHHH----HHHHHHhC---CCcEEEEECCC-------CCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHH
Confidence 1122 24444444 689887 5410 122333366778899999999998887777899999
Q ss_pred HHHHHHHHHH
Q 036921 360 ISIVGKICAE 369 (527)
Q Consensus 360 V~~~~~i~~~ 369 (527)
++.+..++.+
T Consensus 270 ~~al~~ivh~ 279 (295)
T 3glc_A 270 MKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999988765
No 281
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=43.86 E-value=17 Score=36.13 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCCeEEeecCCCCHH--------------------HHHHHHHHHHHHHHHcCCceEEEecCCCC
Q 036921 43 VDVISGCLKAGMSVARFDFSWGNTE--------------------YHQETLENLKAAVKTTKKLCAVMLDTVGP 96 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~shg~~e--------------------~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 96 (527)
.+.++.|.+.|+|++|+-++....+ ...+.++.+=+.+++.| +.+++|+-+|
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~G--i~vild~h~~ 118 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIG--LRIILDRHRP 118 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCC--CEEEEecCCC
Confidence 6789999999999999998732110 14455555555556667 6778888754
No 282
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=43.39 E-value=1.5e+02 Score=27.25 Aligned_cols=111 Identities=17% Similarity=0.155 Sum_probs=62.6
Q ss_pred HHHHHhhcccccccEEEec-----CCCC----HHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEE
Q 036921 209 KEVISSWGVQNKIDFLSLS-----YTRH----AEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIIL 278 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~s-----fV~s----~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImI 278 (527)
.++++ .+.+.|+|+|-+- |+.+ .+.++++++.. + ....+..++..++ +.++...++ +|+|.+
T Consensus 26 ~~~i~-~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~--~~~~v~l~vnd~~--~~v~~~~~~Gad~v~v 97 (230)
T 1rpx_A 26 GEQVK-AIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---D--LPLDVHLMIVEPD--QRVPDFIKAGADIVSV 97 (230)
T ss_dssp HHHHH-HHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---C--SCEEEEEESSSHH--HHHHHHHHTTCSEEEE
T ss_pred HHHHH-HHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---C--CcEEEEEEecCHH--HHHHHHHHcCCCEEEE
Confidence 44554 5678899988773 5544 45555554432 2 3455667787643 345666554 599988
Q ss_pred eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 279 SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 279 aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.-.... .+.. ...++.++++|+.+++ .. |. |..|. ..++..++|.+++.
T Consensus 98 h~~~~~----~~~~----~~~~~~~~~~g~~ig~~~~--------p~-t~~e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 98 HCEQSS----TIHL----HRTINQIKSLGAKAGVVLN--------PG-TPLTA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp ECSTTT----CSCH----HHHHHHHHHTTSEEEEEEC--------TT-CCGGG---GTTTTTTCSEEEEE
T ss_pred EecCcc----chhH----HHHHHHHHHcCCcEEEEeC--------CC-CCHHH---HHHHHhhCCEEEEE
Confidence 622001 1221 3667788888988887 42 11 11221 23445789988553
No 283
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=43.38 E-value=2.3e+02 Score=28.50 Aligned_cols=116 Identities=17% Similarity=0.166 Sum_probs=68.0
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+...+ .| -++.+...++.++.+..+
T Consensus 106 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~~- 167 (372)
T 1p5j_A 106 MAAAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGWV- 167 (372)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTEE-
T ss_pred HHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCcE-
Confidence 3456778999999886 2 222222344445556998775432 23 566666666554321211
Q ss_pred hhhhhhhhhcccCCCCCh--HHHHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHhh----C-CCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTH--LESIASSAVRAAIKVK--ASVIICFTSSGRAARLIAKY----R-PTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~~----R-P~~PIiAv~~ 440 (527)
|-..| .++ .+.-...+.++..+++ .+.|||.+-+|.++.-++++ . |.+.|+++.+
T Consensus 168 ~v~~~----------~n~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~ 231 (372)
T 1p5j_A 168 YIPPF----------DDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMET 231 (372)
T ss_dssp ECCSS----------CCHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred EeCCC----------CCHHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEec
Confidence 11001 122 2222334566777764 68999999999997766643 3 8899999854
No 284
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=43.15 E-value=1.4e+02 Score=29.69 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=57.6
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCC-
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRG- 281 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRg- 281 (527)
+|.++.|+|+|++. +--|.++=.++.+. .+..+ .+++||+-+ -|.++++......+. +||+|+-+-
T Consensus 39 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 116 (318)
T 3qfe_A 39 AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG--PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPA 116 (318)
T ss_dssp HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC--TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 47789999998864 23344444444443 44444 678899988 345566555555444 599999765
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
.+.-..+.+.+...-+.|.+ +.+.|+++
T Consensus 117 y~~kp~~~~~l~~~f~~ia~---a~~lPiil 144 (318)
T 3qfe_A 117 YFGKATTPPVIKSFFDDVSC---QSPLPVVI 144 (318)
T ss_dssp C---CCCHHHHHHHHHHHHH---HCSSCEEE
T ss_pred ccCCCCCHHHHHHHHHHHHh---hCCCCEEE
Confidence 33222344566555555555 45899998
No 285
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=43.03 E-value=1.3e+02 Score=29.48 Aligned_cols=118 Identities=12% Similarity=0.053 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++++ - |..+....+...-..|++.+...++. .| .++.+...++.++-...+.+
T Consensus 76 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLTM-----------PETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 567788999999886 2 21122234445555699987765431 12 45666655554432211011
Q ss_pred hhhhhhhhcccCCCCChH--HH-HHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHhh----C-CCCCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTHL--ES-IASSAVRAAIKVK--ASVIICFTSSGRAARLIAKY----R-PTMPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~--~~-ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~~----R-P~~PIiAv~~ 440 (527)
-..| .++. .. -...+.++.++++ .+.|||.+-+|.++.-++++ . |...|+++.+
T Consensus 141 ~~~~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~ 204 (316)
T 1y7l_A 141 LKQF----------ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEP 204 (316)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEE
T ss_pred CCCC----------CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEec
Confidence 0001 1121 11 2334677777775 68999999999998776653 4 9999999854
No 286
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=42.87 E-value=42 Score=34.10 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCCeEEeecCC--CCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 43 VDVISGCLKAGMSVARFDFSW--GNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~sh--g~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+..+++.+.|.+.+.|++.| ++.++-.+.++.+|++ .|..+.|++|..
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a---~g~~~~l~vDan 201 (374)
T 3sjn_A 151 VAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA---AGPEMEVQIDLA 201 (374)
T ss_dssp HHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred HHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 356778888999999999997 4677666777777765 455566666654
No 287
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=42.86 E-value=1.5e+02 Score=30.00 Aligned_cols=57 Identities=14% Similarity=0.049 Sum_probs=32.7
Q ss_pred CCEEEEeCCCCcCCCCchhHHHHHHHHHHH-HHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhC-CcEEEeCC
Q 036921 273 ADGIILSRGNLGIDLPPEKVFLFQKAALYK-CNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDG-SDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~-c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g-~D~imLs~ 348 (527)
.|.|-+..+...-.-+. .+ ..++. .+..++|+|. .. . |. .+...++..| +|+|++..
T Consensus 264 ~d~i~v~~~~~~~~~~~-~~-----~~~~~i~~~~~iPvi~~Gg---------i-~~---~~a~~~l~~g~aD~V~igR 323 (365)
T 2gou_A 264 IVYLHIAEVDWDDAPDT-PV-----SFKRALREAYQGVLIYAGR---------Y-NA---EKAEQAINDGLADMIGFGR 323 (365)
T ss_dssp CSEEEEECCBTTBCCCC-CH-----HHHHHHHHHCCSEEEEESS---------C-CH---HHHHHHHHTTSCSEEECCH
T ss_pred CCEEEEeCCCcCCCCCc-cH-----HHHHHHHHHCCCcEEEeCC---------C-CH---HHHHHHHHCCCcceehhcH
Confidence 48888876543211111 11 22333 3345889987 54 2 33 3456677788 99999973
No 288
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=42.71 E-value=1.4e+02 Score=29.96 Aligned_cols=94 Identities=17% Similarity=0.252 Sum_probs=55.7
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+-.++. .|||++. |=- +..+..++-..+-+.+++.++. ..|||. +. ..+-.|.-+.+. |-..|+
T Consensus 59 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Ga 127 (343)
T 2v9d_A 59 DDLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGTG---------GTNARETIELSQHAQQAGA 127 (343)
T ss_dssp HHHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------SSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 5899884 221 2334455544555555555432 579998 65 445566655555 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+-+.++..+.|+..++
T Consensus 128 davlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 128 DGIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp SEEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997443323335667778888876554
No 289
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=42.60 E-value=2.5e+02 Score=27.32 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=56.2
Q ss_pred HHHHHh-CCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |=-| ..+..++-..+-+.+++.++ -..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 30 ~~li~~Gv~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGTG---------TNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------cccHHHHHHHHHHHHHcCC
Confidence 334433 4999984 2222 23344454444455555442 3479998 64 344555655544 666799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVK 128 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999997443333345678888899888775
No 290
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=42.55 E-value=2.6e+02 Score=28.02 Aligned_cols=145 Identities=13% Similarity=0.041 Sum_probs=81.3
Q ss_pred hhcccccccEEEec----CCC--C----HHHHHHHHHHHHHcCCCCCceEEE------------eecC------hHhHhh
Q 036921 214 SWGVQNKIDFLSLS----YTR--H----AEDVRQAREYLSKLGDLSQTQIFA------------KIEN------IEGLTH 265 (527)
Q Consensus 214 ~~~~~~g~d~I~~s----fV~--s----~~dv~~lr~~l~~~~~~~~~~Iia------------KIEt------~~av~n 265 (527)
+.+.+.|+++|-+. +-. + .+++.++++.+.+.| -.+.-+. -+-+ ..+++.
T Consensus 40 ~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~G--L~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~ 117 (387)
T 1bxb_A 40 HKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETG--LKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRK 117 (387)
T ss_dssp HHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHT--CBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHH
T ss_pred HHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhC--CEEEEEecCCCCCccccCCCCCCCCHHHHHHHHHH
Confidence 35678999999887 433 2 578999999999887 3332121 1111 334555
Q ss_pred HHHHHHhC-----CEEEEeCCCCcCC--------CCchhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHh
Q 036921 266 FDEILQAA-----DGIILSRGNLGID--------LPPEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAE 329 (527)
Q Consensus 266 ldeI~~~s-----DgImIaRgDLg~e--------~~~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraE 329 (527)
+...++.+ +.|.+..|--+.+ -.++.+...-+++...|.++ |..+.+ ....+..-.+..+|-++
T Consensus 118 ~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~~~~~~t~~~ 197 (387)
T 1bxb_A 118 SLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGS 197 (387)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHH
T ss_pred HHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCccCCCHHH
Confidence 55555543 6777765522211 12346667777888888888 666555 32111100223556666
Q ss_pred hhhHHHHHHhCCcE-EEeCCcc----ccCCChHHHHHH
Q 036921 330 ATDVANAVLDGSDA-ILLGAET----LRGLYPVETISI 362 (527)
Q Consensus 330 v~Dv~nav~~g~D~-imLs~Et----a~G~yP~e~V~~ 362 (527)
+.++...+ |.+. +-+.-+| ..|..|.+.++.
T Consensus 198 ~~~ll~~v--~~~~~vgl~lD~gH~~~~g~d~~~~l~~ 233 (387)
T 1bxb_A 198 MLAFIHTL--DRPERFGLNPEFAHETMAGLNFVHAVAQ 233 (387)
T ss_dssp HHHHHTTS--SSGGGEEECCBHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHc--CCccceEEEEecCcccccCCCHHHHHHH
Confidence 65555443 4444 5555555 235556555444
No 291
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=42.51 E-value=45 Score=32.56 Aligned_cols=53 Identities=8% Similarity=0.194 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHcCCCeEEeecCC---------CCH-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 41 RSVDVISGCLKAGMSVARFDFSW---------GNT-EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 41 ~~~~~l~~l~~~G~~v~RiN~sh---------g~~-e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
.+.+.|+.|.+.|+|++||-++. +.. ++..+.++.+=+.+.+.| +.+++|+-+
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vildlh~ 104 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND--LVVIINCHH 104 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 35889999999999999997642 221 233455555555555567 677888875
No 292
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=42.37 E-value=48 Score=33.50 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHcCCCeEEeecCCCC---------H-HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 41 RSVDVISGCLKAGMSVARFDFSWGN---------T-EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 41 ~~~~~l~~l~~~G~~v~RiN~shg~---------~-e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
.+.+.++.|.+.|+|++||-++... . +...+.++.+=+.+.+.| +.+++|+-.
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~G--i~vild~h~ 132 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEG--LYVIINIHG 132 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEECCCG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 3678999999999999999886421 1 233444555544455556 778899885
No 293
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=42.33 E-value=1.8e+02 Score=29.27 Aligned_cols=115 Identities=17% Similarity=0.170 Sum_probs=67.7
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+...+ .| -++.+...+++++-... .
T Consensus 106 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~-~ 167 (364)
T 4h27_A 106 MAAAYAARQLGVPATIVV-----------PGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGW-V 167 (364)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTE-E
T ss_pred HHHHHHHHHhCCceEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCe-E
Confidence 3467779999999886 2 222222334444556999876642 23 46777666665432111 1
Q ss_pred hhhhhhhhhcccCCCCCh--HHHHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHh----hC-CCCCEEEEe
Q 036921 376 QDLYFKKTVKCVGEPMTH--LESIASSAVRAAIKVK--ASVIICFTSSGRAARLIAK----YR-PTMPVLSVV 439 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~----~R-P~~PIiAv~ 439 (527)
|-..| .++ .+.-...+.++..+++ .+.|||.+-+|.+..-+++ .. |.++|+++-
T Consensus 168 ~~~~~----------~np~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe 230 (364)
T 4h27_A 168 YIPPF----------DDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAME 230 (364)
T ss_dssp EECSS----------CSHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred EeCCC----------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 11001 122 1222234567777764 6899999999998666554 33 889999984
No 294
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=42.12 E-value=1.8e+02 Score=28.34 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=54.2
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |=- +..+..++-..+-+.+++.++ -..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 31 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~A~~~Ga 99 (294)
T 3b4u_A 31 RRCLSNGCDSVTLF-GTTGEGCSVGSRERQAILSSFIAAGI-APSRIVTGVL---------VDSIEDAADQSAEALNAGA 99 (294)
T ss_dssp HHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHTTC-CGGGEEEEEC---------CSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CccHHHHHHHHHHHHhcCC
Confidence 334443 5999984 222 123444443333333333322 1368988 65 344456655554 566799
Q ss_pred cEEEeCCccccC-CChHHHHHHHHHHHHHH
Q 036921 342 DAILLGAETLRG-LYPVETISIVGKICAEA 370 (527)
Q Consensus 342 D~imLs~Eta~G-~yP~e~V~~~~~i~~~a 370 (527)
|++|+..=--.. .-+-+.++..+.|+..+
T Consensus 100 davlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 100 RNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp SEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 999998543333 34567888999998877
No 295
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=41.99 E-value=39 Score=33.36 Aligned_cols=64 Identities=13% Similarity=0.082 Sum_probs=47.0
Q ss_pred HHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhH--hhHHHHHHh-CCEEEEeC
Q 036921 209 KEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGL--THFDEILQA-ADGIILSR 280 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av--~nldeI~~~-sDgImIaR 280 (527)
.+.++ -+++.|+|+|++-. -++++++++++.+...+ .++ +||=--|+ +|+.++.+. .|+|.+|.
T Consensus 204 ~eea~-eal~aGaD~I~LDn-~~~~~~~~~v~~l~~~~--~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLD-AVLPEKPELILLDN-FAVWQTQTAVQRRDSRA--PTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHH-HHGGGCCSEEEEET-CCHHHHHHHHHHHHHHC--TTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHH-HHHHcCCCEEEECC-CCHHHHHHHHHHhhccC--CCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 34454 35789999999998 58899999999887644 344 34433444 789999988 69999875
No 296
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=41.92 E-value=19 Score=21.97 Aligned_cols=16 Identities=50% Similarity=0.443 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 036921 66 TEYHQETLENLKAAVK 81 (527)
Q Consensus 66 ~e~~~~~i~~ir~~~~ 81 (527)
.|+.++|++++|+++-
T Consensus 2 eeeyqemlenlreaev 17 (26)
T 2dpr_A 2 EEEYQEMLENLREAEV 17 (26)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 3678999999999854
No 297
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=41.82 E-value=48 Score=33.90 Aligned_cols=101 Identities=20% Similarity=0.112 Sum_probs=55.7
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCC-----------------------HHHHHHHHHHHHHcCCCCCceEEE--e
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRH-----------------------AEDVRQAREYLSKLGDLSQTQIFA--K 256 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s-----------------------~~dv~~lr~~l~~~~~~~~~~Iia--K 256 (527)
|.+++.|..++.+.+.+.|+|+|.++.-.. +..++.++++-+..+ .++.||+ -
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~--~~ipvI~~GG 306 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQ--GRVPIIGVGG 306 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTT--TCSCEEEESS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcC--CCceEEEECC
Confidence 346766776665567889999999874320 011223333222222 3567776 3
Q ss_pred ecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCC
Q 036921 257 IENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGK 308 (527)
Q Consensus 257 IEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gK 308 (527)
|.|.+-+ .+-|..-+|+||+||+=|-- ++.-+..+.+.+-....+.|.
T Consensus 307 I~s~~da--~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 307 VSSGQDA--LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp CCSHHHH--HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHH--HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 5554433 22222347999999986521 233344555555555666664
No 298
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=41.72 E-value=1.3e+02 Score=28.91 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=52.9
Q ss_pred cCCCCChHhhhhHHHHHHhCCcEEEeCCccc---cCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHH
Q 036921 321 DNLRPTRAEATDVANAVLDGSDAILLGAETL---RGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESI 397 (527)
Q Consensus 321 ~~p~PtraEv~Dv~nav~~g~D~imLs~Eta---~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~i 397 (527)
..+.|+.+-+..+..|+.+|||.|=+----. .|+|. ...+-+..+.+.+... .-+..+. .. ..+ +.-
T Consensus 89 ~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~-~v~~eI~~v~~a~~~~-~lKVIlE-----t~-~Lt--~ee 158 (239)
T 3ngj_A 89 LGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYD-DVEKDVKAVVDASGKA-LTKVIIE-----CC-YLT--NEE 158 (239)
T ss_dssp TCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHHTTS-EEEEECC-----GG-GSC--HHH
T ss_pred CCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHH-HHHHHHHHHHHHhcCC-ceEEEEe-----cC-CCC--HHH
Confidence 3455777888999999999999986532222 25553 3555566666555421 1111111 00 112 223
Q ss_pred HHHHHHHHHhcCCcEEEEECCCcH
Q 036921 398 ASSAVRAAIKVKASVIICFTSSGR 421 (527)
Q Consensus 398 a~~av~~a~~~~a~~Ivv~T~sG~ 421 (527)
...++++|.+.+|+ +|=|.||.
T Consensus 159 i~~a~~ia~~aGAD--fVKTSTGf 180 (239)
T 3ngj_A 159 KVEVCKRCVAAGAE--YVKTSTGF 180 (239)
T ss_dssp HHHHHHHHHHHTCS--EEECCCSS
T ss_pred HHHHHHHHHHHCcC--EEECCCCC
Confidence 55688899999999 56677774
No 299
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=41.68 E-value=2e+02 Score=26.02 Aligned_cols=98 Identities=12% Similarity=0.129 Sum_probs=59.5
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceE-EEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhH
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQI-FAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKV 292 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~I-iaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v 292 (527)
.+.+.|+++|-+- ..+++.++.++++....+ .++.| ...+.+. +.++..++. +|+|.++--
T Consensus 27 ~~~~~G~~~i~l~-~~~~~~~~~i~~i~~~~~--~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~~----------- 89 (212)
T 2v82_A 27 AVIDAGFDAVEIP-LNSPQWEQSIPAIVDAYG--DKALIGAGTVLKP---EQVDALARMGCQLIVTPNI----------- 89 (212)
T ss_dssp HHHHHTCCEEEEE-TTSTTHHHHHHHHHHHHT--TTSEEEEECCCSH---HHHHHHHHTTCCEEECSSC-----------
T ss_pred HHHHCCCCEEEEe-CCChhHHHHHHHHHHhCC--CCeEEEeccccCH---HHHHHHHHcCCCEEEeCCC-----------
Confidence 4577899999874 345666666766655443 22222 1233443 245555554 599974321
Q ss_pred HHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 293 FLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 293 ~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
...+++.+++.|.++++ .. |..|+ ..+...|+|.+.+
T Consensus 90 ---~~~~~~~~~~~g~~~~~g~~-----------t~~e~---~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 ---HSEVIRRAVGYGMTVCPGCA-----------TATEA---FTALEAGAQALKI 127 (212)
T ss_dssp ---CHHHHHHHHHTTCEEECEEC-----------SHHHH---HHHHHTTCSEEEE
T ss_pred ---CHHHHHHHHHcCCCEEeecC-----------CHHHH---HHHHHCCCCEEEE
Confidence 12457788999988765 32 44443 5667789999986
No 300
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=41.64 E-value=93 Score=33.22 Aligned_cols=95 Identities=18% Similarity=0.230 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHHcCCCCCceEEEe-ecChHhHhhHHHHHHh-CCEEEEe-CCCCcCCCCchhHHHHHHHHHHHHHH--
Q 036921 231 HAEDVRQAREYLSKLGDLSQTQIFAK-IENIEGLTHFDEILQA-ADGIILS-RGNLGIDLPPEKVFLFQKAALYKCNM-- 305 (527)
Q Consensus 231 s~~dv~~lr~~l~~~~~~~~~~IiaK-IEt~~av~nldeI~~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~c~~-- 305 (527)
+.++++++|+.. +++|+.| +-+ .+......+. +|+|.|+ .|--..+.+... ..+..++.++++.
T Consensus 331 ~~~~i~~lr~~~-------~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~ 399 (511)
T 1kbi_A 331 TWKDIEELKKKT-------KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRN 399 (511)
T ss_dssp CHHHHHHHHHHC-------SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh-------CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhc
Confidence 456677776642 4678888 333 2223333322 5999993 221112222222 2334455555543
Q ss_pred --cCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 306 --AGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 306 --~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
...|+|. ..+- --.|+..++..|||+||+..
T Consensus 400 ~~~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 400 LKDKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp CBTTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred cCCCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 2689998 6542 34788999999999999974
No 301
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=41.63 E-value=1.6e+02 Score=29.15 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=53.9
Q ss_pred CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH-HHHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA-NAVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~-nav~~g~D~imLs~ 348 (527)
.||+++. |=- +..+..++-..+.+..++.++. ..|+|. +. ..+-+|.-+.+ .|-..|+|++|+..
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGTG---------ANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 5999984 222 2234445544555555555432 479998 65 34445555544 46678999999974
Q ss_pred ccccCCChHHHHHHHHHHHHHHh
Q 036921 349 ETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
=--...-+.+.++..+.|+..+.
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33333335678888888887764
No 302
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=41.62 E-value=1.4e+02 Score=29.56 Aligned_cols=94 Identities=7% Similarity=0.089 Sum_probs=59.5
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +.-|.++=+++-+.. +..+ .+++||+-+= |.++++......+. +||+|+.+-.
T Consensus 52 ~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~--grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 52 ERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA--HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 47788999998863 233445555554443 4444 5788999884 55666655555544 5999997655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.|. .+.+.|+++ .
T Consensus 130 y~~-~s~~~l~~~f~~va---~a~~lPiilYn 157 (315)
T 3na8_A 130 YWK-LNEAEVFQHYRAVG---EAIGVPVMLYN 157 (315)
T ss_dssp SSC-CCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhCCCcEEEEe
Confidence 432 34456655555555 445799998 5
No 303
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=41.55 E-value=31 Score=33.16 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=35.9
Q ss_pred eEEEEecC-CCC-CCHHHHHHHHHcCCCeEEeecCCCCH-HHHHHHHHHHHH
Q 036921 30 TKIVGTLG-PKS-RSVDVISGCLKAGMSVARFDFSWGNT-EYHQETLENLKA 78 (527)
Q Consensus 30 tkIi~TiG-p~~-~~~~~l~~l~~~G~~v~RiN~shg~~-e~~~~~i~~ir~ 78 (527)
.+.-.|.| |.- .+.+.++.|.++|+|+.=+-.|+|.. +...++++.+|+
T Consensus 8 ~~~~it~gDP~~~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~ 59 (234)
T 2f6u_A 8 KWRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ 59 (234)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC
Confidence 44556666 443 57889999999999999999999865 335556655553
No 304
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=41.40 E-value=2e+02 Score=28.36 Aligned_cols=86 Identities=12% Similarity=0.162 Sum_probs=53.3
Q ss_pred CCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~ 348 (527)
.|||++. |=-| ..+..++-..+-+.+++.+ -..|+|. +. ..+-+|.-+.+. |-..|+|++|+..
T Consensus 43 v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGvg---------~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGVS---------APGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEecC---------CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4999884 2222 2344455444445555554 3689998 65 345566655554 6667999999963
Q ss_pred ccccCCChHHHHHHHHHHHHHHh
Q 036921 349 ETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
=- .-.-+-+.++..+.|+..+.
T Consensus 111 P~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 PP-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp CT-TCCSHHHHHHHHHHHHHHHC
T ss_pred CC-CCCCHHHHHHHHHHHHHhCC
Confidence 32 11224677888899988876
No 305
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=41.28 E-value=1.2e+02 Score=24.69 Aligned_cols=114 Identities=17% Similarity=0.177 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCC
Q 036921 230 RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGK 308 (527)
Q Consensus 230 ~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gK 308 (527)
.+......+++.|...| ... .+....+.+. -++.+-.. .|.|++. + .++-..-..+-+++-+.....+.
T Consensus 13 d~~~~~~~l~~~L~~~~--~~~-~v~~~~~~~~--a~~~l~~~~~dlii~D---~--~l~~~~g~~~~~~lr~~~~~~~~ 82 (144)
T 3kht_A 13 DNPDDIALIRRVLDRKD--IHC-QLEFVDNGAK--ALYQVQQAKYDLIILD---I--GLPIANGFEVMSAVRKPGANQHT 82 (144)
T ss_dssp CCHHHHHHHHHHHHHTT--CCE-EEEEESSHHH--HHHHHTTCCCSEEEEC---T--TCGGGCHHHHHHHHHSSSTTTTC
T ss_pred CCHHHHHHHHHHHHhcC--CCe-eEEEECCHHH--HHHHhhcCCCCEEEEe---C--CCCCCCHHHHHHHHHhcccccCC
Confidence 45666777888888776 332 2333333221 12222222 4888874 2 22222222222222111122468
Q ss_pred cEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHH
Q 036921 309 PAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 309 pvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
|+|+ |. .. +......+...|+++++...-. .+.+-.+.+.++.+.
T Consensus 83 pii~~s~---------~~---~~~~~~~~~~~ga~~~l~Kp~~----~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 83 PIVILTD---------NV---SDDRAKQCMAAGASSVVDKSSN----NVTDFYGRIYAIFSY 128 (144)
T ss_dssp CEEEEET---------TC---CHHHHHHHHHTTCSEEEECCTT----SHHHHHHHHHHHHHH
T ss_pred CEEEEeC---------CC---CHHHHHHHHHcCCCEEEECCCC----cHHHHHHHHHHHHHH
Confidence 8998 75 22 3345567788899999886320 244455555555443
No 306
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=41.19 E-value=35 Score=28.76 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhcCCcEEEEECCC--------cHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTSS--------GRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~s--------G~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 145 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAV 145 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEE
Confidence 34555677888999998887652 566777777665 999976
No 307
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=40.81 E-value=1.5e+02 Score=29.19 Aligned_cols=94 Identities=12% Similarity=0.135 Sum_probs=60.7
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=+++-+.. +..+ .+++||+-+= |.++++....--+. +||+|+.+-.
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~--grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 117 (306)
T 1o5k_A 40 RYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD--GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPY 117 (306)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC--CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 4778999999987 3455665555555444 3444 5788999884 36666665555444 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
+.- .+.+.+...-+.| |.+.+.|+++ .
T Consensus 118 y~~-~s~~~l~~~f~~v---a~a~~lPiilYn 145 (306)
T 1o5k_A 118 YNK-PTQEGLYQHYKYI---SERTDLGIVVYN 145 (306)
T ss_dssp SSC-CCHHHHHHHHHHH---HTTCSSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 432 2445555555555 4455899998 5
No 308
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=40.75 E-value=42 Score=34.27 Aligned_cols=62 Identities=11% Similarity=0.178 Sum_probs=42.3
Q ss_pred CeEEEEecCCCCC-CHH----HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 29 MTKIVGTLGPKSR-SVD----VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 29 ~tkIi~TiGp~~~-~~~----~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+....+|+|-... +++ ..+++.++|.+.+.+...|++.+.-.+.++.+|++ .|..+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---vg~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKH---LGDAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHH---HCTTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH---cCCCCEEEEEC
Confidence 4455666543312 443 45667889999999999998888777888888876 34445555554
No 309
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=40.67 E-value=1.5e+02 Score=29.04 Aligned_cols=94 Identities=17% Similarity=0.109 Sum_probs=55.1
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .|||++. |=- +..+..++-..+-+.+++.++. ..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGAG---------SNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEccC---------CCCHHHHHHHHHHHHhcCC
Confidence 334443 5999874 221 1234445544455555554432 479988 65 344556655554 566799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997443323334667778888877654
No 310
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=40.59 E-value=89 Score=29.36 Aligned_cols=131 Identities=13% Similarity=0.016 Sum_probs=73.8
Q ss_pred hhcccccccEEEecCCCC----HHHHHHHHHHHHHcCCCCCceEEEe------ec------ChHhHhhHHHHHHhC----
Q 036921 214 SWGVQNKIDFLSLSYTRH----AEDVRQAREYLSKLGDLSQTQIFAK------IE------NIEGLTHFDEILQAA---- 273 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~s----~~dv~~lr~~l~~~~~~~~~~IiaK------IE------t~~av~nldeI~~~s---- 273 (527)
+.+.+.|+|+|=+..-.. .+++.++++.+.+.| -.+..++- +- ..++++.+...++.+
T Consensus 24 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~g--l~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG 101 (290)
T 2qul_A 24 KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLG--LTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLG 101 (290)
T ss_dssp HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHT--CEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcC--CceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 366789999998875442 268999999999887 22222221 11 123455666666553
Q ss_pred -CEEEEe----CCC--CcCCCC----chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCC
Q 036921 274 -DGIILS----RGN--LGIDLP----PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGS 341 (527)
Q Consensus 274 -DgImIa----RgD--Lg~e~~----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~ 341 (527)
+.+.+. .|. +.-... ++.+...-+++.+.|+++|..+.+ +.- ....+...|..++.++...+ |.
T Consensus 102 ~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~--~~~~~~~~~~~~~~~l~~~~--~~ 177 (290)
T 2qul_A 102 APVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVN--RFEQWLCNDAKEAIAFADAV--DS 177 (290)
T ss_dssp CSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCC--TTTCSSCCSHHHHHHHHHHH--CC
T ss_pred CCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCc--cccccccCCHHHHHHHHHHc--CC
Confidence 444431 132 211112 235555667788888889988776 321 11134456777777777766 33
Q ss_pred cEEEeCCcc
Q 036921 342 DAILLGAET 350 (527)
Q Consensus 342 D~imLs~Et 350 (527)
+.+-+.-+|
T Consensus 178 ~~~g~~~D~ 186 (290)
T 2qul_A 178 PACKVQLDT 186 (290)
T ss_dssp TTEEEEEEH
T ss_pred CCEEEEEEc
Confidence 434333343
No 311
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=40.58 E-value=2.1e+02 Score=27.80 Aligned_cols=88 Identities=22% Similarity=0.167 Sum_probs=53.5
Q ss_pred CCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH-HHHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA-NAVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~-nav~~g~D~imLs~ 348 (527)
.||+++. |=-| ..+..++-..+-+..++.++. ..|+|. +. ..+-.|.-+.+ .|-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGTG---------ANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeCC---------CCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 5999874 2222 344455554555555555532 479998 65 34455555544 46667999999974
Q ss_pred ccccCCChHHHHHHHHHHHHHHh
Q 036921 349 ETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
=--...-+-+.++..+.|+..+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 33233334677888888887664
No 312
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=40.56 E-value=3.5e+02 Score=29.41 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=63.8
Q ss_pred cCCCC-CHhhHHHHHhhcccccc-cEEEecCCCCHHHHHHHHHHHHHcC------------------------------C
Q 036921 200 ELPTL-SDKDKEVISSWGVQNKI-DFLSLSYTRHAEDVRQAREYLSKLG------------------------------D 247 (527)
Q Consensus 200 ~lp~l-t~~D~~di~~~~~~~g~-d~I~~sfV~s~~dv~~lr~~l~~~~------------------------------~ 247 (527)
-+|.+ +..|.+.++++.-+.|. +..+++++++++-++.+.+++.... .
T Consensus 191 ~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~ 270 (587)
T 2e28_A 191 AASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNM 270 (587)
T ss_dssp EESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHH
Confidence 34544 78888888765445664 7889999999999988877643210 0
Q ss_pred CCCceEEE------eecC-----hHhHhhHHHHHHhCCEEEE----eCCCCcCCCCchhHHHHHHHHHHHHHH
Q 036921 248 LSQTQIFA------KIEN-----IEGLTHFDEILQAADGIIL----SRGNLGIDLPPEKVFLFQKAALYKCNM 305 (527)
Q Consensus 248 ~~~~~Iia------KIEt-----~~av~nldeI~~~sDgImI----aRgDLg~e~~~~~v~~~qk~Ii~~c~~ 305 (527)
...+.++| +|++ .|.-+=...|+.-+|++|+ +.|+. |.+- ...+.+|+..+.+
T Consensus 271 ~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~y----Pvea-V~~m~~I~~~~E~ 338 (587)
T 2e28_A 271 LGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQY----PVEA-VKTMHQIALRTEQ 338 (587)
T ss_dssp HTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC----HHHH-HHHHHHHHHHHHT
T ss_pred cCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCCC----HHHH-HHHHHHHHHHHhh
Confidence 02334444 5554 3555556777888899998 55543 4433 3455566666654
No 313
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=40.54 E-value=1.1e+02 Score=28.91 Aligned_cols=41 Identities=17% Similarity=0.120 Sum_probs=24.1
Q ss_pred HHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCCh
Q 036921 304 NMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYP 356 (527)
Q Consensus 304 ~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP 356 (527)
+..+.|+|. ..+ -+.. |+..+...|+|+++...---.+.++
T Consensus 197 ~~~~ipvia~GGI---------~~~e---d~~~~~~~Gadgv~vgsal~~~~~~ 238 (266)
T 2w6r_A 197 PLTTLPIIASGGA---------GKME---HFLEAFLAGADAALAASVFHFREID 238 (266)
T ss_dssp GGCCSCEEEESCC---------CSHH---HHHHHHHHTCSEEEESTTTC-----
T ss_pred HHcCCCEEEeCCC---------CCHH---HHHHHHHcCCHHHHccHHHHcCCCC
Confidence 445899998 653 2334 5555555699999998554445443
No 314
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=40.41 E-value=24 Score=34.16 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=34.9
Q ss_pred CHHHHHHHHHcCCCeEEeecCCCC--HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSWGN--TEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~shg~--~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
+.+.++.|-+.|+|++|+-++.|. .+...+.++.+=+.+++.| +.+++|+-+
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNK--MVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 457899999999999999886441 1123344555545555566 677888764
No 315
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=40.40 E-value=1.1e+02 Score=31.79 Aligned_cols=124 Identities=11% Similarity=0.152 Sum_probs=66.5
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+....+...+ .+..+++...++.++....+.
T Consensus 174 ~AlA~aaa~~Gi~~~Ivm-----------P~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~ 241 (435)
T 1jbq_A 174 IGLALAAAVRGYRCIIVM-----------PEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHI 241 (435)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------CSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEEC
T ss_pred HHHHHHHHHcCCeEEEEe-----------CCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEE
Confidence 3467788999999886 2 22122233444555699987765432111 122234445554433222111
Q ss_pred hhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVK--ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
.. .|. .+.++..-....+.++.++++ .+.||+.+-+|.++.-+++ ..|.+.|+++-+
T Consensus 242 i~-q~~-------n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep 304 (435)
T 1jbq_A 242 LD-QYR-------NASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 304 (435)
T ss_dssp CC-TTT-------CTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred eC-ccC-------CcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEec
Confidence 00 011 010111112233566666663 7999999999999776665 479999999854
No 316
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=40.21 E-value=26 Score=33.77 Aligned_cols=49 Identities=12% Similarity=-0.052 Sum_probs=32.8
Q ss_pred eEEEEecC-CCC-CCHHHHHHHHHcCCCeEEeecCCCCHHH-HHHHHHHHHH
Q 036921 30 TKIVGTLG-PKS-RSVDVISGCLKAGMSVARFDFSWGNTEY-HQETLENLKA 78 (527)
Q Consensus 30 tkIi~TiG-p~~-~~~~~l~~l~~~G~~v~RiN~shg~~e~-~~~~i~~ir~ 78 (527)
++.-.|.| |.- .+.+.++.|.++|+|++=+-.|.|...+ ..++++.+|+
T Consensus 8 ~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~ 59 (240)
T 1viz_A 8 EWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR 59 (240)
T ss_dssp GCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT
T ss_pred cceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC
Confidence 45556666 443 5789999999999999999999987754 4555555553
No 317
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=40.12 E-value=41 Score=32.64 Aligned_cols=52 Identities=13% Similarity=0.224 Sum_probs=35.1
Q ss_pred CHHHHHHHHHcCCCeEEeecCCC---------C-HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSWG---------N-TEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~shg---------~-~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
+.+.++.|.+.|+|++|+-++.. . .+...+.++.+=+.+++.| +.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G--i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG--LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTT--CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 57889999999999999987631 1 1233444555545555566 667888864
No 318
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=39.99 E-value=42 Score=34.74 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=39.8
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHcCCCeEEeecCCCCH---HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 29 MTKIVGTLGPKSRSVD----VISGCLKAGMSVARFDFSWGNT---EYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~~----~l~~l~~~G~~v~RiN~shg~~---e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+...-+|.... .+++ ..+++.+.|.+.+.+++.||.. ....+.++.++.+.+..|..+.|++|..
T Consensus 167 ~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN 238 (412)
T 3stp_A 167 RIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECY 238 (412)
T ss_dssp SEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 45666664322 2444 4556777899999999999732 2234445555555455665566677654
No 319
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=39.40 E-value=1.5e+02 Score=28.82 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=66.2
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+...++. . .-++.+...++.++-.. +
T Consensus 78 ~a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~-~~~~~~~a~~l~~~~~~-~- 140 (308)
T 2egu_A 78 IGLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---G-MRGAIAKAEELVREHGY-F- 140 (308)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHHCC-B-
T ss_pred HHHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHHCcC-C-
Confidence 3577888999999876 2 11111223444555699988776432 1 24676666666544321 1
Q ss_pred hhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVK--ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
+...|.+ |.....-....+.++.++++ .+.|||.+-+|.++.-+++ ..|...|+++-+
T Consensus 141 ~~~~~~n-------~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~ 204 (308)
T 2egu_A 141 MPQQFKN-------EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEP 204 (308)
T ss_dssp CC---------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cCCcCCC-------hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEe
Confidence 1111211 11110111223445555553 7899999999999766664 469999999854
No 320
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=39.33 E-value=27 Score=36.31 Aligned_cols=43 Identities=21% Similarity=0.334 Sum_probs=34.3
Q ss_pred EecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHH
Q 036921 34 GTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKA 78 (527)
Q Consensus 34 ~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~ 78 (527)
+.+|+.. .+.++.++++|++++=|+.+||..+.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 4456543 789999999999999999999988777777766665
No 321
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=39.28 E-value=2.2e+02 Score=28.35 Aligned_cols=134 Identities=17% Similarity=0.152 Sum_probs=74.2
Q ss_pred HHHhhcccccccEEEecCCCCH---------------HHHHHHHHHHHHcCCCCCceEEEeecC-----hHhHhhHHHHH
Q 036921 211 VISSWGVQNKIDFLSLSYTRHA---------------EDVRQAREYLSKLGDLSQTQIFAKIEN-----IEGLTHFDEIL 270 (527)
Q Consensus 211 di~~~~~~~g~d~I~~sfV~s~---------------~dv~~lr~~l~~~~~~~~~~IiaKIEt-----~~av~nldeI~ 270 (527)
+++ .++++|+|.|.+.+--|. +.+.++.++..+.| ..+..-+|. ..-.+.+-+++
T Consensus 101 ~i~-~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G----~~v~~~~~~~~~~~~~~~~~~~~~~ 175 (337)
T 3ble_A 101 TVD-WIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSG----LKINVYLEDWSNGFRNSPDYVKSLV 175 (337)
T ss_dssp HHH-HHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTT----CEEEEEEETHHHHHHHCHHHHHHHH
T ss_pred hHH-HHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC----CEEEEEEEECCCCCcCCHHHHHHHH
Confidence 675 678999999888764443 23333344445555 345566766 22233333443
Q ss_pred Hh-----CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH-c-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCc
Q 036921 271 QA-----ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNM-A-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSD 342 (527)
Q Consensus 271 ~~-----sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~-~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D 342 (527)
+. +|.|-++ |=.--+.+.++ .++++..++ . +.|+.+ ++ |..- -| +.....|+..|+|
T Consensus 176 ~~~~~~Ga~~i~l~--DT~G~~~P~~v----~~lv~~l~~~~p~~~i~~H~H-------nd~G-lA-~AN~laAv~aGa~ 240 (337)
T 3ble_A 176 EHLSKEHIERIFLP--DTLGVLSPEET----FQGVDSLIQKYPDIHFEFHGH-------NDYD-LS-VANSLQAIRAGVK 240 (337)
T ss_dssp HHHHTSCCSEEEEE--CTTCCCCHHHH----HHHHHHHHHHCTTSCEEEECB-------CTTS-CH-HHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEEe--cCCCCcCHHHH----HHHHHHHHHhcCCCeEEEEec-------CCcc-hH-HHHHHHHHHhCCC
Confidence 32 3777774 32111222333 333444333 3 678887 76 2111 22 2334458899999
Q ss_pred EEEeC----CccccCCChHHHHHHHHH
Q 036921 343 AILLG----AETLRGLYPVETISIVGK 365 (527)
Q Consensus 343 ~imLs----~Eta~G~yP~e~V~~~~~ 365 (527)
.+=-| || ..|+=|.|.|-++-+
T Consensus 241 ~vd~tv~GlG~-~aGN~~~E~lv~~L~ 266 (337)
T 3ble_A 241 GLHASINGLGE-RAGNTPLEALVTTIH 266 (337)
T ss_dssp EEEEBGGGCSS-TTCBCBHHHHHHHHH
T ss_pred EEEEecccccc-cccchhHHHHHHHHH
Confidence 88754 66 678888888765543
No 322
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=39.26 E-value=2.9e+02 Score=27.23 Aligned_cols=117 Identities=20% Similarity=0.217 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |.......+...-..|++.+...+ . .-++.+...++.++- ..+
T Consensus 101 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~-~~~- 161 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVVM-----------PKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETE-GRI- 161 (342)
T ss_dssp HHHHHHHHHHTCCEEEEE-----------CTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHH-CCE-
T ss_pred HHHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhc-CCE-
Confidence 4567788999999886 2 222222344445556998775442 2 346776666665442 111
Q ss_pred hhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcC-CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVK-ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
|-..|.+ + .........+.++..+++ .+.||+.+-+|.|+.-+++ ..|...|+++-+
T Consensus 162 ~~~~~~n-------~-~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 223 (342)
T 2gn0_A 162 FIPPYDD-------P-KVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQA 223 (342)
T ss_dssp ECCSSSS-------H-HHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EeCCCCC-------H-HHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEe
Confidence 1100110 0 012222334666777764 8999999999999776655 479999999854
No 323
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.95 E-value=83 Score=25.23 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=37.1
Q ss_pred HHHHHHhcCCcEEEEEC----CCcH-HHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 401 AVRAAIKVKASVIICFT----SSGR-AARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 401 av~~a~~~~a~~Ivv~T----~sG~-tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
|.+.....+.++|++-. .+|. ..+.+.+..|.+||+.++. ..+.....+ .+-.|+..++..+.
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~-----------~~~~~~~~~-~~~~g~~~~l~KP~ 110 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISA-----------TENMADIAK-ALRLGVEDVLLKPV 110 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEEC-----------CCCHHHHHH-HHHHCCSEEEESCC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEc-----------CCCHHHHHH-HHHcCCCEEEeCCC
Confidence 33344556678776643 2343 3566777789999999853 123333232 34578888887654
No 324
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=38.93 E-value=1.9e+02 Score=28.67 Aligned_cols=145 Identities=16% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH-HHHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA-NAVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~-nav~~g~D~imLs~ 348 (527)
.||+++. |=- +..+..++-..+.+.+++.++. ..|||. +. ..+-+|.-+.+ .|-..|+|++|+..
T Consensus 57 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg---------~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 57 INGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGAG---------SNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp CSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4999874 222 2233444444444455554432 579998 65 34455555544 46678999999974
Q ss_pred ccccCCChHHHHHHHHHHHHHHhhc-cchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhc-CCcEEEEEC-CCcHHHHH
Q 036921 349 ETLRGLYPVETISIVGKICAEAEKV-FNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKV-KASVIICFT-SSGRAARL 425 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~aE~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-~a~~Ivv~T-~sG~tA~~ 425 (527)
=--...-+-+.++..+.|+..+.-- +-|.. ... .....+ .+.+ .+++.+. +...|=-.+ .-.+..++
T Consensus 126 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~--P~~---tg~~l~-~~~~----~~La~~~pnIvgiKdssgd~~~~~~l 195 (315)
T 3si9_A 126 PYYNRPNQRGLYTHFSSIAKAISIPIIIYNI--PSR---SVIDMA-VETM----RDLCRDFKNIIGVKDATGKIERASEQ 195 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC--HHH---HSCCCC-HHHH----HHHHHHCTTEEEEEECSCCTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEeC--chh---hCCCCC-HHHH----HHHHhhCCCEEEEEeCCCCHHHHHHH
Confidence 4333333567788888888776421 22210 100 011112 2332 3344422 222221111 12455666
Q ss_pred HHhhCCCCCEEEE
Q 036921 426 IAKYRPTMPVLSV 438 (527)
Q Consensus 426 is~~RP~~PIiAv 438 (527)
+...+|+..|+..
T Consensus 196 ~~~~~~~f~v~~G 208 (315)
T 3si9_A 196 REKCGKDFVQLSG 208 (315)
T ss_dssp HHHHCSSSEEEES
T ss_pred HHHcCCCeEEEec
Confidence 7777788888854
No 325
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=38.92 E-value=1.4e+02 Score=29.21 Aligned_cols=93 Identities=14% Similarity=0.036 Sum_probs=54.2
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |-- +..+..++-..+-+..++.++. ..|+|. +. ..+-.|.-+.+. |-..|+
T Consensus 29 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGTG---------ANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CccHHHHHHHHHHHHhcCC
Confidence 444444 5999884 222 2234445544555555554432 579998 65 345566655555 555699
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
|++|+..=--...-+-+.++..+.|+..+
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 99999743322233456677777776554
No 326
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=38.69 E-value=1.9e+02 Score=29.20 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=64.5
Q ss_pred CCCHhhHHHHH-------hhcccccccEEEe-------------cCCCCHHH------------HHHHHHHHHHc-CCCC
Q 036921 203 TLSDKDKEVIS-------SWGVQNKIDFLSL-------------SYTRHAED------------VRQAREYLSKL-GDLS 249 (527)
Q Consensus 203 ~lt~~D~~di~-------~~~~~~g~d~I~~-------------sfV~s~~d------------v~~lr~~l~~~-~~~~ 249 (527)
.||..|...+. +.+.+.|+|+|=+ |..+...| +.++.+.+++. | .
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg--~ 227 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWS--A 227 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSC--G
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcC--C
Confidence 35655554442 2457789999987 44343333 33333333332 3 3
Q ss_pred CceEEEeecCh---H-------hHhhHHHHHHh-----CCEEEEeCCCCcCCCCchhHHHHHHHHHHH-HHHcCCcEEE-
Q 036921 250 QTQIFAKIENI---E-------GLTHFDEILQA-----ADGIILSRGNLGIDLPPEKVFLFQKAALYK-CNMAGKPAVV- 312 (527)
Q Consensus 250 ~~~IiaKIEt~---~-------av~nldeI~~~-----sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~-c~~~gKpvi~- 312 (527)
+ .|..||--. . .++...++++. .|.|-+..+...-. +...+ ..++. .+..+.|++.
T Consensus 228 ~-~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~-----~~~~~v~~~~~iPvi~~ 300 (364)
T 1vyr_A 228 D-RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYSE-----AFRQKVRERFHGVIIGA 300 (364)
T ss_dssp G-GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCH-----HHHHHHHHHCCSEEEEE
T ss_pred C-cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-CcccH-----HHHHHHHHHCCCCEEEE
Confidence 4 688887322 1 22333333332 38888865432111 11111 22332 3445889987
Q ss_pred ecchhhhhcCCCCChHhhhhHHHHHHhC-CcEEEeCC
Q 036921 313 TRVVDSMTDNLRPTRAEATDVANAVLDG-SDAILLGA 348 (527)
Q Consensus 313 Tq~LeSM~~~p~PtraEv~Dv~nav~~g-~D~imLs~ 348 (527)
.. . |+ .+...++..| +|+|++..
T Consensus 301 Gg---------i-t~---~~a~~~l~~g~aD~V~~gR 324 (364)
T 1vyr_A 301 GA---------Y-TA---EKAEDLIGKGLIDAVAFGR 324 (364)
T ss_dssp SS---------C-CH---HHHHHHHHTTSCSEEEESH
T ss_pred CC---------c-CH---HHHHHHHHCCCccEEEECH
Confidence 54 2 33 3445677777 99999973
No 327
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=38.63 E-value=1.7e+02 Score=29.03 Aligned_cols=88 Identities=17% Similarity=0.103 Sum_probs=53.8
Q ss_pred CCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~ 348 (527)
.|||++. |=-| ..+..++-..+-+.+++.++. ..|+|. +. ..+-.|.-+.+. |-..|+|++|+..
T Consensus 59 v~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg---------~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 59 VHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAH-RVPTIVSVS---------DLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4899874 2221 233444444444444444432 479998 64 344556655544 6677999999975
Q ss_pred ccccCCChHHHHHHHHHHHHHHh
Q 036921 349 ETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
=--...-+-+.++..+.|+..+.
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 44333346788888888887765
No 328
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=38.60 E-value=41 Score=33.07 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHcCCCeEEeecCCC---------CH-HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 41 RSVDVISGCLKAGMSVARFDFSWG---------NT-EYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 41 ~~~~~l~~l~~~G~~v~RiN~shg---------~~-e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+.+.++.|.+.|+|++||-++.. .. +...+.++.+=+.+++.| +.+++|+-
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~G--i~vildlh 90 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN--LGLVLDMH 90 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 457889999999999999987522 11 234455555555556666 66788865
No 329
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=38.52 E-value=2.7e+02 Score=27.25 Aligned_cols=127 Identities=14% Similarity=0.162 Sum_probs=0.0
Q ss_pred CCHhhHHHHHhhcccccccEEEecC-------------CCCHHHHHHHHHHHHHcCCCCCceEEEeecC-------hHhH
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSY-------------TRHAEDVRQAREYLSKLGDLSQTQIFAKIEN-------IEGL 263 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sf-------------V~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt-------~~av 263 (527)
+|-+|..-.+ .+-+.|+|.|.+.. -=|.+++...-+.+.+.- +...|++=.+- .+++
T Consensus 22 ~tayDa~sA~-l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~--~~~~vvaD~pfgsy~~s~~~a~ 98 (275)
T 1o66_A 22 LTAYESSFAA-LMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA--KNAMIVSDLPFGAYQQSKEQAF 98 (275)
T ss_dssp EECCSHHHHH-HHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC--SSSEEEEECCTTSSSSCHHHHH
T ss_pred EeCcCHHHHH-HHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC--CCCeEEEECCCCCccCCHHHHH
Q ss_pred hhHHHHHHhC--CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE-------E-ecchhhhhcCCCCChHhh--h
Q 036921 264 THFDEILQAA--DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV-------V-TRVVDSMTDNLRPTRAEA--T 331 (527)
Q Consensus 264 ~nldeI~~~s--DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi-------~-Tq~LeSM~~~p~PtraEv--~ 331 (527)
+|...+++ + +||-+--| ..+...|+++.++|.||+ - .+.+....-..+..+++- .
T Consensus 99 ~na~rl~k-aGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~ 165 (275)
T 1o66_A 99 AAAAELMA-AGAHMVKLEGG------------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLN 165 (275)
T ss_dssp HHHHHHHH-TTCSEEEEECS------------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHH
T ss_pred HHHHHHHH-cCCcEEEECCc------------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHH
Q ss_pred hHHHHHHhCCcEEEe
Q 036921 332 DVANAVLDGSDAILL 346 (527)
Q Consensus 332 Dv~nav~~g~D~imL 346 (527)
|.......|+|+++|
T Consensus 166 rA~a~~eAGA~~ivl 180 (275)
T 1o66_A 166 DAKAHDDAGAAVVLM 180 (275)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCcEEEE
No 330
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=38.25 E-value=2e+02 Score=30.83 Aligned_cols=139 Identities=13% Similarity=0.027 Sum_probs=75.5
Q ss_pred CCCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCC-CCceE---------EEeecChHhHhhH----HH
Q 036921 203 TLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDL-SQTQI---------FAKIENIEGLTHF----DE 268 (527)
Q Consensus 203 ~lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~-~~~~I---------iaKIEt~~av~nl----de 268 (527)
.+|..|.++|.++|.+.|+. ++|=++++-....+-....+.++. ..... .-.+-+.+..+=+ +|
T Consensus 252 ~YT~~di~eIv~YA~~rgI~--VIPEID~PGH~~a~l~~yp~L~~~~~~~~~~~~~~~~~~~l~~~~~~ty~fl~~vl~E 329 (525)
T 3gh5_A 252 YYTQEQFKDIVSYAAERYIE--VIPEIDMPGHTNAALASYGELNPDGKRKAMRTDTAVGYSTLMPRAEITYQFVEDVISE 329 (525)
T ss_dssp CBCHHHHHHHHHHHHTTTCE--EEEECCCSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCE--EEEEecccchHHHHHHhChhhccCCCCCcccccCCCCCcccCCCChhHHHHHHHHHHH
Confidence 35666666666666666666 345566665555443221111100 00000 0011123333333 44
Q ss_pred HHHh--CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhh-------hhHHHHHH
Q 036921 269 ILQA--ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEA-------TDVANAVL 338 (527)
Q Consensus 269 I~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv-------~Dv~nav~ 338 (527)
+++. ++-|-|| ||=.-..+.+......+++.+.++++||-+++ ..|++.- +.|..+-| .....+..
T Consensus 330 v~~lFp~~~iHiG-gDE~~~~~~~~~~~F~~~v~~~l~~~Gk~~i~W~ei~~~~---~l~~~~iv~~W~~~~~~~~~~a~ 405 (525)
T 3gh5_A 330 LAAISPSPYIHLG-GDESNATSAADYDYFFGRVTAIANSYGKKVVGWDPSDTSS---GATSDSVLQNWTCSASTGTAAKA 405 (525)
T ss_dssp HHHHCCSSEEECC-CCCCTTSCHHHHHHHHHHHHHHHHHTTCEEEEETTGGGCT---TCCTTCEEEECSCCTTTTHHHHH
T ss_pred HHHhCCCCEEEEc-CcCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEeccccCC---CCCCCeEEEeCCCCcHHHHHHHH
Confidence 4444 3577777 66444445566777888999999999999998 8887542 22322211 23466777
Q ss_pred hCCcEEEeC
Q 036921 339 DGSDAILLG 347 (527)
Q Consensus 339 ~g~D~imLs 347 (527)
.|-+.||-.
T Consensus 406 ~G~~vI~sp 414 (525)
T 3gh5_A 406 KGMKVIVSP 414 (525)
T ss_dssp HTCEEEECC
T ss_pred CCCcEEEeC
Confidence 788888765
No 331
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=38.20 E-value=64 Score=27.84 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcCCcEEEEECC---------CcHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTS---------SGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~---------sG~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.++++||+-++ -|.++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv 154 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLII 154 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEE
Confidence 4555667788999999998876 3567888877755 999976
No 332
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=38.15 E-value=54 Score=31.08 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=39.9
Q ss_pred HH-HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCCccccCCChHHHHHHHHHHH
Q 036921 294 LF-QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGAETLRGLYPVETISIVGKIC 367 (527)
Q Consensus 294 ~~-qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~Eta~G~yP~e~V~~~~~i~ 367 (527)
.+ -...++.++++|+++.+ |- + . ..++.. ++..|+|+|+-. ||..+.+.+...|
T Consensus 180 ~~~~~~~v~~~~~~G~~v~~wTv------n--~-----~~~~~~~l~~~GvdgIiTD-------~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 180 QMRRPGIIEASRKAGLEIMVYYG------G--D-----DMAVHREIATSDVDYINLD-------RPDLFAAVRSGMA 236 (248)
T ss_dssp HHHSHHHHHHHHHHTCEEEEECC------C--C-----CHHHHHHHHHSSCSEEEES-------CHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHCCCEEEEECC------C--C-----HHHHHHHHHHcCCCEEEEC-------CHHHHHHHHHHhc
Confidence 44 57899999999999999 82 1 1 234556 677899998754 8988877766543
No 333
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.14 E-value=2e+02 Score=26.56 Aligned_cols=95 Identities=8% Similarity=0.078 Sum_probs=53.8
Q ss_pred hhcccccccEEEecCCC------CHHHHHHHHHHHHHcCCCCCceEEE---e--ec--C----hHhHhhHHHHHHhC---
Q 036921 214 SWGVQNKIDFLSLSYTR------HAEDVRQAREYLSKLGDLSQTQIFA---K--IE--N----IEGLTHFDEILQAA--- 273 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~------s~~dv~~lr~~l~~~~~~~~~~Iia---K--IE--t----~~av~nldeI~~~s--- 273 (527)
+.+.+.|+|+|=+.... +..++.++++.+.+.| +.+.+ - +- . .++++.+...++.+
T Consensus 21 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~g----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 96 (278)
T 1i60_A 21 ELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHH----IKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTL 96 (278)
T ss_dssp HHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSS----CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcC----CCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 36678999999887222 3467888999998776 33321 1 11 1 23455555555543
Q ss_pred --CEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHcCCcEEE
Q 036921 274 --DGIILSRGNLGIDLP----PEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 274 --DgImIaRgDLg~e~~----~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
+.|.+..|.-.-..+ ++.+...-+++...|+++|..+.+
T Consensus 97 G~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (278)
T 1i60_A 97 GVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIAL 141 (278)
T ss_dssp TCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 556554443211223 234445556667777777776665
No 334
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=38.14 E-value=1.4e+02 Score=28.38 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=24.2
Q ss_pred hhcccccccEEEecCCC------CHHHHHHHHHHHHHcC
Q 036921 214 SWGVQNKIDFLSLSYTR------HAEDVRQAREYLSKLG 246 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~------s~~dv~~lr~~l~~~~ 246 (527)
+.+.+.|+|+|=+.+-. +..++.++++.+.+.|
T Consensus 43 ~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~g 81 (296)
T 2g0w_A 43 KVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHN 81 (296)
T ss_dssp HHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred HHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcC
Confidence 36689999999887531 3356778888888766
No 335
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=38.12 E-value=3.9e+02 Score=28.39 Aligned_cols=115 Identities=13% Similarity=0.067 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchh
Q 036921 298 AALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQD 377 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~ 377 (527)
-+...|+..|.++.+. .|.......+...-..|++.+. .+. ..-++.+...+++++-... |-
T Consensus 93 avA~aa~~lGi~~~Iv----------mP~~~p~~Kv~~~r~~GAeVvl-v~~-----~~dda~~~a~ela~e~g~~--~v 154 (514)
T 1tdj_A 93 GVAFSSARLGVKALIV----------MPTATADIKVDAVRGFGGEVLL-HGA-----NFDEAKAKAIELSQQQGFT--WV 154 (514)
T ss_dssp HHHHHHHHTTCCEEEE----------CCSSCCHHHHHHHHHHSCEEEC-CCS-----SHHHHHHHHHHHHHHHCCE--EC
T ss_pred HHHHHHHHcCCcEEEE----------ECCCCCHHHHHHHHHCCCEEEE-ECC-----CHHHHHHHHHHHHHhcCCE--ee
Confidence 4567788999998761 1211112344445556998665 322 3467777666665542211 10
Q ss_pred hhhhhhhcccCCCCCh--HHHHHHHHHHHHHhcC-CcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 378 LYFKKTVKCVGEPMTH--LESIASSAVRAAIKVK-ASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 378 ~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~~-a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
.+-.++ ...-..-+.++..+++ .++|||.+-+|.++.-+++ .+|.+.|+++.+
T Consensus 155 ----------~pfdnp~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep 214 (514)
T 1tdj_A 155 ----------PPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA 214 (514)
T ss_dssp ----------CSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 011122 1122233666777764 7999999999999776665 479999999854
No 336
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=38.10 E-value=2.6e+02 Score=27.35 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=52.3
Q ss_pred CCEEEEe-CCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCCc
Q 036921 273 ADGIILS-RGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGAE 349 (527)
Q Consensus 273 sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~E 349 (527)
.|||++. ---=+..+..++-..+-+..++.++ -..|||. +. ..+-+|.-+.+. |-..|+|++|+..=
T Consensus 50 v~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 50 CDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGAG---------TYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp CSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---------CSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4999884 1111223444554444444444443 2469998 64 345566655544 66679999999743
Q ss_pred cccCCChHHHHHHHHHHHHHHh
Q 036921 350 TLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 350 ta~G~yP~e~V~~~~~i~~~aE 371 (527)
--...-+.+.++..+.|+..+.
T Consensus 120 ~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 120 YYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCHHHHHHHHHHHHHhcC
Confidence 3223335677778888776653
No 337
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=37.91 E-value=31 Score=33.73 Aligned_cols=54 Identities=13% Similarity=0.007 Sum_probs=38.1
Q ss_pred CCCHHHHHHHH-HcCCCeEEeecCCCC-----HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 40 SRSVDVISGCL-KAGMSVARFDFSWGN-----TEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 40 ~~~~~~l~~l~-~~G~~v~RiN~shg~-----~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
..+.+.++.|. +.|+|++|+-+.+.. .++..+.++.+=+.+.+.| +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLD--IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHT--CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 45678899998 679999999886521 1235566666666677777 567888764
No 338
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=37.68 E-value=1.3e+02 Score=29.44 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=57.5
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHH-HHHcCCCCCceEEEeecC---hHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREY-LSKLGDLSQTQIFAKIEN---IEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIEt---~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=.++-+. .+..+ .+++||+-+=+ .++++......+. +||+|+.+-.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD--GRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPY 106 (292)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC--CCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 4778999999887 334555555555444 34444 57889998843 5555444443332 4999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
..- .+.+.+...-+.|. .+.+.|+++
T Consensus 107 y~~-~s~~~l~~~f~~ia---~a~~lPiil 132 (292)
T 2ojp_A 107 YNR-PSQEGLYQHFKAIA---EHTDLPQIL 132 (292)
T ss_dssp SSC-CCHHHHHHHHHHHH---TTCSSCEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HhcCCCEEE
Confidence 432 24455555555554 455899998
No 339
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=37.66 E-value=2.2e+02 Score=28.58 Aligned_cols=95 Identities=13% Similarity=0.035 Sum_probs=61.6
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHHHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYLSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgDL 283 (527)
++.++.|+|+|++ .+.-|.++=.++-+. ..+ .+++||+-+= |.++++......+. +||+|+.+-..
T Consensus 54 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~--grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 54 KELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVK--AGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVL 129 (344)
T ss_dssp HHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHH--TTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhC--CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCcc
Confidence 4778899999887 355666666666665 233 4688999884 46666666555544 59999976555
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ec
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq 314 (527)
.-..+.+.+...-+.|.++ +.+.|+++ ..
T Consensus 130 ~~~~s~~~l~~~f~~IA~a--a~~lPiilYn~ 159 (344)
T 2hmc_A 130 SRGSVIAAQKAHFKAILSA--APEIPAVIYNS 159 (344)
T ss_dssp SSTTCHHHHHHHHHHHHHH--STTSCEEEEEB
T ss_pred CCCCCHHHHHHHHHHHHhh--CCCCcEEEEec
Confidence 3212445555555555432 45899998 53
No 340
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=37.61 E-value=2.2e+02 Score=27.74 Aligned_cols=146 Identities=17% Similarity=0.183 Sum_probs=87.5
Q ss_pred CCHhhHHHHHhhccccc-ccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee----cChHhHhhHHHHHHh-----C
Q 036921 204 LSDKDKEVISSWGVQNK-IDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI----ENIEGLTHFDEILQA-----A 273 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g-~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI----Et~~av~nldeI~~~-----s 273 (527)
.++.++..+.+.+++.| +|+|=+-.-...+.+.++.+..... +++||+-- .|+. .+.+.+++.. +
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~----~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~Ga 190 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH----NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGA 190 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT----TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC----CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCC
Confidence 34555555555788899 9999998866677777777655543 45666643 2442 3334444332 4
Q ss_pred CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH-cCCcEEEecchhhhhcCCCCChHhhhhHHHHHHhCCcEE--EeCCcc
Q 036921 274 DGIILSRGNLGIDLPPEKVFLFQKAALYKCNM-AGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAI--LLGAET 350 (527)
Q Consensus 274 DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~-~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~i--mLs~Et 350 (527)
|.+=|+. +.-..+++..+.+-.-..... .++|+|. =+|=.....||. .+.+. |+-.. .+...+
T Consensus 191 DIvKia~----~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa----~~MG~~G~~SRi-----~~~~~-GS~vTf~~l~~~s 256 (276)
T 3o1n_A 191 DIPKIAV----MPQTKADVLTLLTATVEMQERYADRPIIT----MSMSKTGVISRL-----AGEVF-GSAATFGAVKKAS 256 (276)
T ss_dssp SEEEEEE----CCSSHHHHHHHHHHHHHHHHHTCCSCCEE----EECSGGGTHHHH-----CHHHH-TCCEEECBSSCCS
T ss_pred CEEEEEe----cCCChHHHHHHHHHHHHHHhcCCCCCEEE----EECCCchhhHHH-----HHHHh-CCceEecCCCCCC
Confidence 7665541 223345666666554443333 6889886 135555555554 66554 44443 345679
Q ss_pred ccCCChHHHHHHHHHHHH
Q 036921 351 LRGLYPVETISIVGKICA 368 (527)
Q Consensus 351 a~G~yP~e~V~~~~~i~~ 368 (527)
|=|..+++-++.+-+++.
T Consensus 257 APGQl~~~~l~~~l~~l~ 274 (276)
T 3o1n_A 257 APGAISVADLRTVLTILH 274 (276)
T ss_dssp STTCCBHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhc
Confidence 999999888777666554
No 341
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=37.54 E-value=60 Score=26.91 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcCCcEEEEECC--------CcHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTS--------SGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~--------sG~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++ -|.++..+.+.- +|||+.+
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~-~~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHA-ECSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHC-SSEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhC-CCCEEEe
Confidence 4555667888999999999875 367788887754 5999965
No 342
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=37.17 E-value=3.3e+02 Score=27.17 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=0.0
Q ss_pred ccc-CCccccCCCCCHhhHHHHHhhcccccccEEEec-------------CCCCHHHHHHHHHHHHHcCCCCCceEEEee
Q 036921 192 LHA-SQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS-------------YTRHAEDVRQAREYLSKLGDLSQTQIFAKI 257 (527)
Q Consensus 192 vnl-p~~~~~lp~lt~~D~~di~~~~~~~g~d~I~~s-------------fV~s~~dv~~lr~~l~~~~~~~~~~IiaKI 257 (527)
+|+ |+.-.+ ...+..+...-....++.|+|+|=+. .|...++++.+...+.... ....+..-|
T Consensus 34 lNvTpDSFsd-~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~--~~~~vpISI 110 (314)
T 3tr9_A 34 INVSPNSFYH-PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIK--KRFPQLISV 110 (314)
T ss_dssp EECSTTCSBC-BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHH--HHCCSEEEE
T ss_pred EeCCCCchhh-ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHH--hhCCCeEEE
Q ss_pred cChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHh-------h
Q 036921 258 ENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAE-------A 330 (527)
Q Consensus 258 Et~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraE-------v 330 (527)
.|..+----..+- +-.|+-.++.-...+ .++..+.++|.|+++ |-....|...+ +
T Consensus 111 DT~~~~Va~aAl~--------aGa~iINDVsg~~~~----~m~~v~a~~g~~vVl------Mh~~G~P~tmq~~~~ydvv 172 (314)
T 3tr9_A 111 DTSRPRVMREAVN--------TGADMINDQRALQLD----DALTTVSALKTPVCL------MHFPSETRKPGSTTHFYFL 172 (314)
T ss_dssp ECSCHHHHHHHHH--------HTCCEEEETTTTCST----THHHHHHHHTCCEEE------ECCCCTTCCTTSSCHHHHH
T ss_pred eCCCHHHHHHHHH--------cCCCEEEECCCCCch----HHHHHHHHhCCeEEE------ECCCCCCcccccccccchH
Q ss_pred hhHHH--------HHHhCCc--EEEeCCccc---cCCChHHHHHHHHHHHHHHhhcc------chhhhhhhhhcccCCCC
Q 036921 331 TDVAN--------AVLDGSD--AILLGAETL---RGLYPVETISIVGKICAEAEKVF------NQDLYFKKTVKCVGEPM 391 (527)
Q Consensus 331 ~Dv~n--------av~~g~D--~imLs~Eta---~G~yP~e~V~~~~~i~~~aE~~~------~~~~~~~~~~~~~~~~~ 391 (527)
.++.. +...|.+ -++|-.=.- .||-+.+..++|+++-+-.+--+ +.+++..++.. .+.
T Consensus 173 ~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~~~~---~~~ 249 (314)
T 3tr9_A 173 QSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLN---QPP 249 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHHHHHT---CCG
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEechhhhhhhhcC---CCh
Q ss_pred ChHHHHHHHHHHHHHhcCCcEEEE
Q 036921 392 THLESIASSAVRAAIKVKASVIIC 415 (527)
Q Consensus 392 ~~~~~ia~~av~~a~~~~a~~Ivv 415 (527)
........++..+|...+|+.+-|
T Consensus 250 ~~R~~~t~a~~~~a~~~Ga~IvRv 273 (314)
T 3tr9_A 250 ENRLFGSIAADVLAVYHGASIIRT 273 (314)
T ss_dssp GGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHhHHHHHHHHHHHHHcCCcEEEe
No 343
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=37.11 E-value=56 Score=27.21 Aligned_cols=41 Identities=12% Similarity=0.171 Sum_probs=31.5
Q ss_pred HHHHHHH-HHHhcCCcEEEEECC---------CcHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVR-AAIKVKASVIICFTS---------SGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~-~a~~~~a~~Ivv~T~---------sG~tA~~is~~RP~~PIiAv 438 (527)
.+...++ .|.+.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 95 ~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 95 PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 4555666 788899999998775 3678888887766 999965
No 344
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=37.08 E-value=61 Score=34.05 Aligned_cols=102 Identities=17% Similarity=0.044 Sum_probs=58.1
Q ss_pred CCCCHhhHHHHHhhcccccccEEEecCCCCH---------------------HHHHHHHHHHHHcCCCCCceEEE--eec
Q 036921 202 PTLSDKDKEVISSWGVQNKIDFLSLSYTRHA---------------------EDVRQAREYLSKLGDLSQTQIFA--KIE 258 (527)
Q Consensus 202 p~lt~~D~~di~~~~~~~g~d~I~~sfV~s~---------------------~dv~~lr~~l~~~~~~~~~~Iia--KIE 258 (527)
|.+++.|..++.+.+.+.|+|+|.++.-... ..++.++++-+..+ .++.||+ -|.
T Consensus 306 pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~--~~iPVIg~GGI~ 383 (443)
T 1tv5_A 306 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTN--KQIPIIASGGIF 383 (443)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTT--TCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcC--CCCcEEEECCCC
Confidence 4477777766666678899999999863110 01222333222223 4678887 566
Q ss_pred ChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCc
Q 036921 259 NIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKP 309 (527)
Q Consensus 259 t~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKp 309 (527)
|.+-. .+-|..=+|+|+++|+=+-- ++.-+..+.+.+-....+.|..
T Consensus 384 s~~DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~~ 430 (443)
T 1tv5_A 384 SGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 430 (443)
T ss_dssp SHHHH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTCS
T ss_pred CHHHH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCCC
Confidence 65544 23333347999999986521 2333344455555556666643
No 345
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=37.07 E-value=1.3e+02 Score=29.08 Aligned_cols=138 Identities=16% Similarity=0.083 Sum_probs=76.3
Q ss_pred hhcccccccEEEecC----CC------CHHHHHHHHHHHHHcCCCCCceEEE---ee----------c------------
Q 036921 214 SWGVQNKIDFLSLSY----TR------HAEDVRQAREYLSKLGDLSQTQIFA---KI----------E------------ 258 (527)
Q Consensus 214 ~~~~~~g~d~I~~sf----V~------s~~dv~~lr~~l~~~~~~~~~~Iia---KI----------E------------ 258 (527)
+.+.+.|+|+|=+.. +. +.+++.++++.+.+.| +.+.+ -. .
T Consensus 22 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g----l~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l~ 97 (340)
T 2zds_A 22 RLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYG----LKCWAISNHLVGQAVCDAIIDERHEAILPARIW 97 (340)
T ss_dssp HHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTT----CEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHHH
T ss_pred HHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcC----CeEEEeecccccccccccccccccccccccccc
Confidence 366789999998864 22 3456889999999877 34432 11 0
Q ss_pred ---C-----hHhHhhHHHHHHhC-----CEEEEeCCCCcCC--C------------CchhHHHHHHHHHHHHHHcCCcEE
Q 036921 259 ---N-----IEGLTHFDEILQAA-----DGIILSRGNLGID--L------------PPEKVFLFQKAALYKCNMAGKPAV 311 (527)
Q Consensus 259 ---t-----~~av~nldeI~~~s-----DgImIaRgDLg~e--~------------~~~~v~~~qk~Ii~~c~~~gKpvi 311 (527)
+ .++++.+...++.+ +.|.+..|..... . .++.+...-+++.+.|.++|..+.
T Consensus 98 ~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 177 (340)
T 2zds_A 98 GDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFA 177 (340)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 1 23455555555553 6777765543210 0 112344455677888888998877
Q ss_pred E-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccc----cCCChHHHHH
Q 036921 312 V-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETL----RGLYPVETIS 361 (527)
Q Consensus 312 ~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta----~G~yP~e~V~ 361 (527)
+ +. -.....+-.++.++...+- +.+.+-+.-+|. .|..|.++++
T Consensus 178 lEn~-----~~~~~~~~~~~~~ll~~v~-~~~~vg~~~D~~H~~~~g~d~~~~l~ 226 (340)
T 2zds_A 178 HEVH-----PSEIAYDYWTTHRALEAVG-HRPAFGLNFDPSHFVWQDLDPVGFLW 226 (340)
T ss_dssp EECC-----TTSSCCSHHHHHHHHHHTT-TCTTEEEEECCHHHHHTTCCHHHHHH
T ss_pred EEcC-----CCcccCCHHHHHHHHHhcC-CCCCeeEEEchhhHHHhCCCHHHHHH
Confidence 6 42 2222346666666666552 023343333432 2445555443
No 346
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=36.86 E-value=1.7e+02 Score=28.98 Aligned_cols=94 Identities=12% Similarity=0.182 Sum_probs=57.9
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEeec--ChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKIE--NIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKIE--t~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+|.++.|+|+|++. +.-|.++=.++-+. .+..+ .+++||+-+= |.++++.....-+. +||+|+.+-..
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~--grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 40 EFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN--GRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVH 117 (314)
T ss_dssp HHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC--CCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 47789999998863 34555555555444 44444 5789999885 34455444443333 49999965544
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
. ..+.+.+...-+.| |.+.+.|+++ .
T Consensus 118 ~-~~s~~~l~~~f~~v---a~a~~lPiilYn 144 (314)
T 3d0c_A 118 P-YITDAGAVEYYRNI---IEALDAPSIIYF 144 (314)
T ss_dssp S-CCCHHHHHHHHHHH---HHHSSSCEEEEE
T ss_pred C-CCCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 2 22445555555555 4556899998 5
No 347
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=36.82 E-value=71 Score=31.80 Aligned_cols=156 Identities=14% Similarity=0.095 Sum_probs=86.4
Q ss_pred CCCCCHhhHHHHHhhcc-cccccEEEecCCCCHHHHHHHHHHHHHcCC-CCCceEEEeecChHhHhhHHHHHHh------
Q 036921 201 LPTLSDKDKEVISSWGV-QNKIDFLSLSYTRHAEDVRQAREYLSKLGD-LSQTQIFAKIENIEGLTHFDEILQA------ 272 (527)
Q Consensus 201 lp~lt~~D~~di~~~~~-~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~-~~~~~IiaKIEt~~av~nldeI~~~------ 272 (527)
-|..|+.|.+.+-+-|. +.++..|+++ +..|..+++.|...+. ...++|.+=|=-|.|-...+.-+..
T Consensus 36 ~p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~ 111 (297)
T 4eiv_A 36 TDGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALK 111 (297)
T ss_dssp STTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 35568888876644556 6777777775 5578888888864210 0146777777666555444333321
Q ss_pred --CCEE--EEeCCCCcCC--CCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHh-hhhHHH-HHHhCCcE
Q 036921 273 --ADGI--ILSRGNLGID--LPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAE-ATDVAN-AVLDGSDA 343 (527)
Q Consensus 273 --sDgI--mIaRgDLg~e--~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraE-v~Dv~n-av~~g~D~ 343 (527)
+|-| +|..|.|--. =.++.+..-.+.+.++|...-..||+ |-.| +..| +..... ++..|+|.
T Consensus 112 ~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADF 182 (297)
T 4eiv_A 112 DGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADF 182 (297)
T ss_dssp TTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSE
T ss_pred cCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCE
Confidence 3332 2222222100 00123333334555566433344677 7665 3444 333333 56789999
Q ss_pred EEeCCccccCCChHHHHHHHHHHHHH
Q 036921 344 ILLGAETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 344 imLs~Eta~G~yP~e~V~~~~~i~~~ 369 (527)
|=-|.==..|.--++.|+.|.+.+++
T Consensus 183 VKTSTGf~~~gAT~edV~lM~~~v~~ 208 (297)
T 4eiv_A 183 LQTSSGLGATHATMFTVHLISIALRE 208 (297)
T ss_dssp EECCCSSSSCCCCHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 87663323334568999999999864
No 348
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=36.77 E-value=1.6e+02 Score=27.84 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=56.4
Q ss_pred hhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee---c----ChHhHhhHHHHHHhCCEEEEe
Q 036921 207 KDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI---E----NIEGLTHFDEILQAADGIILS 279 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI---E----t~~av~nldeI~~~sDgImIa 279 (527)
.|.+++.+.+.+.|++.++++-. +.++-..+.++.... .++....-+ + +.++++.+++.+...-.+ |
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~---p~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~--~ 100 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTS---DRIFCSVGVHPHDAKEVPEDFIEHLEKFAKDEKVV--A 100 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTC---TTEEEEECCCGGGGGGCCTTHHHHHHHHTTSTTEE--E
T ss_pred cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHC---CCEEEEEeeccccccccCHHHHHHHHHHhccCCEE--E
Confidence 35555555667889998777543 677777777765443 222222222 1 123445555554322222 3
Q ss_pred CCCCcCCCCch-hHHHHH----HHHHHHHHHcCCcEEE-ec
Q 036921 280 RGNLGIDLPPE-KVFLFQ----KAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 280 RgDLg~e~~~~-~v~~~q----k~Ii~~c~~~gKpvi~-Tq 314 (527)
-|..|+..... .-...| ..+++.|.+.|+|+++ +.
T Consensus 101 iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~ 141 (268)
T 1j6o_A 101 IGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIR 141 (268)
T ss_dssp EEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 35555554321 001334 5778899999999999 74
No 349
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=36.73 E-value=1.6e+02 Score=29.73 Aligned_cols=129 Identities=13% Similarity=0.101 Sum_probs=68.0
Q ss_pred CCCHhhHHHHHh-------hcccccccEEEecCC-------------CCH------------HHHHHHHHHHHHc-CCCC
Q 036921 203 TLSDKDKEVISS-------WGVQNKIDFLSLSYT-------------RHA------------EDVRQAREYLSKL-GDLS 249 (527)
Q Consensus 203 ~lt~~D~~di~~-------~~~~~g~d~I~~sfV-------------~s~------------~dv~~lr~~l~~~-~~~~ 249 (527)
.||..|++.+.+ .+.+.|+|+|=+-.- +.. .-+.++.+.+.+. | .
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg--~ 224 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWP--E 224 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSC--T
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcC--C
Confidence 588888877642 456789999876532 211 1233344444433 4 5
Q ss_pred CceEEEeecC---h----HhHhhHHHHHHh-----CCEEEEeCCCCcCC--CCchhHHHHHHHHHHHHH-HcCCcEEE-e
Q 036921 250 QTQIFAKIEN---I----EGLTHFDEILQA-----ADGIILSRGNLGID--LPPEKVFLFQKAALYKCN-MAGKPAVV-T 313 (527)
Q Consensus 250 ~~~IiaKIEt---~----~av~nldeI~~~-----sDgImIaRgDLg~e--~~~~~v~~~qk~Ii~~c~-~~gKpvi~-T 313 (527)
+..|..||-- . ..++...++++. .|.|-+.-|...-. .+... ..+...++..+ ..+.|++. .
T Consensus 225 d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~G 302 (363)
T 3l5l_A 225 NLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSAW 302 (363)
T ss_dssp TSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEECS
T ss_pred CceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEeC
Confidence 6678888821 1 123333333332 48888865543221 11110 11122222222 34899998 5
Q ss_pred cchhhhhcCCCCChHhhhhHHHHHHhC-CcEEEeC
Q 036921 314 RVVDSMTDNLRPTRAEATDVANAVLDG-SDAILLG 347 (527)
Q Consensus 314 q~LeSM~~~p~PtraEv~Dv~nav~~g-~D~imLs 347 (527)
.+ -|. .+...++..| +|+|++.
T Consensus 303 gI---------~s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 303 GF---------GTP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp ST---------TSH---HHHHHHHHTTSCSEEECC
T ss_pred CC---------CCH---HHHHHHHHCCCccEEEec
Confidence 43 122 3445677788 9999987
No 350
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=36.62 E-value=2.9e+02 Score=29.31 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=51.3
Q ss_pred HHHHHhC--CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhh-------------
Q 036921 267 DEILQAA--DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEA------------- 330 (527)
Q Consensus 267 deI~~~s--DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv------------- 330 (527)
+|+++.- .-|=|| ||=......+......+++.+.++++||.+++ ..+++. ..|....+
T Consensus 303 ~Ev~~lFp~~~iHiG-gDE~~~~~~~l~~~f~~~v~~~v~~~Gk~~i~W~d~~~~----~l~~~~~v~~W~~~~~~~~~~ 377 (512)
T 1jak_A 303 GELAALTPGRYLHIG-GDEAHSTPKADFVAFMKRVQPIVAKYGKTVVGWHQLAGA----EPVEGALVQYWGLDRTGDAEK 377 (512)
T ss_dssp HHHHHTCCSSEEECC-CCCCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEGGGGGS----CCCTTCEEEECCCTTSCHHHH
T ss_pred HHHHHhCCCCeEEEC-CcccccchHHHHHHHHHHHHHHHHhcCCeEEEecccccc----CCCCCeEEEEcCCCCCcccch
Confidence 4444432 567777 55444444455566778899999999999888 888753 34443322
Q ss_pred hhHHHHHHhCCcEEEeCCcc
Q 036921 331 TDVANAVLDGSDAILLGAET 350 (527)
Q Consensus 331 ~Dv~nav~~g~D~imLs~Et 350 (527)
..+..+...|.+.||-.+.-
T Consensus 378 ~~~~~~~~~G~~vI~s~~~~ 397 (512)
T 1jak_A 378 AEVAEAARNGTGLILSPADR 397 (512)
T ss_dssp HHHHHHHHTTCEEEECCTTT
T ss_pred HHHHHHHHCCCCEEEeCCcc
Confidence 24566777899888876543
No 351
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=36.62 E-value=1.8e+02 Score=28.60 Aligned_cols=93 Identities=11% Similarity=0.089 Sum_probs=53.6
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |=- +..+..++-..+-+.+++.++ -..|+|. +. ..+-+|.-+.+. |-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg---------~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 40 RYQLENGVNALIVL-GTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGAG---------TNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcCC---------CccHHHHHHHHHHHHhcCC
Confidence 334443 5999984 221 223444554444455555443 2479998 65 344556655554 556799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHH
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEA 370 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~a 370 (527)
|++|+..=--...-+.+.++..+.|+..+
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 109 NGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 99999743322223466677777776544
No 352
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=36.46 E-value=28 Score=36.02 Aligned_cols=51 Identities=12% Similarity=0.144 Sum_probs=36.0
Q ss_pred CHHHHHHHHHcCCCeEEeecCC-------CCHH--HHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSW-------GNTE--YHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~sh-------g~~e--~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+.+.++.|.+.|+|++||-+++ +.+- ...+.++++=+.+++.| +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G--l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 5788999999999999998862 2110 13455666656666677 77889974
No 353
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=36.20 E-value=1.6e+02 Score=29.63 Aligned_cols=62 Identities=10% Similarity=0.141 Sum_probs=40.9
Q ss_pred eEEEEec-CCCCCCHHH----HHHHHHc-CCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 30 TKIVGTL-GPKSRSVDV----ISGCLKA-GMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 30 tkIi~Ti-Gp~~~~~~~----l~~l~~~-G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
...-+|+ |....+++. .+++++. |.+.+.+.+...+.++-.+.++.+|++ .|..+.+++|..
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~---~g~~~~l~vDan 205 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER---VDSAVRIAIDGN 205 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH---SCTTCEEEEECT
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH---cCCCCcEEeeCC
Confidence 6677774 332334433 3457778 999999999877777766666666654 555556666653
No 354
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=36.02 E-value=61 Score=31.88 Aligned_cols=53 Identities=6% Similarity=-0.095 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHcCCCeEEeecCCC---------C-HHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 40 SRSVDVISGCLKAGMSVARFDFSWG---------N-TEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 40 ~~~~~~l~~l~~~G~~v~RiN~shg---------~-~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
....+.++.|.+.|+|++||-++.. . .+...+.++.+=+.+++.| +.+++|+-
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~G--i~vildlh 98 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYG--IHICISLH 98 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHT--CEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcC--CEEEEEec
Confidence 4568899999999999999986421 1 1234455555555556667 66788874
No 355
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=35.91 E-value=3.2e+02 Score=26.76 Aligned_cols=93 Identities=12% Similarity=0.072 Sum_probs=59.2
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHHHHHcCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREYLSKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~l~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+|.++.|+|+|++. +--|.++=.++-+...+.. .+++||+-+ -|.++++......+. +||+|+-+-..
T Consensus 36 ~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~ 113 (313)
T 3dz1_A 36 DFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS 113 (313)
T ss_dssp HHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 47789999998874 3445555555555544443 468899988 345666655555444 59999976552
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcC--CcEEE-e
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAG--KPAVV-T 313 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~g--Kpvi~-T 313 (527)
-.+.+.+...-+.|.+ +.+ .|+++ .
T Consensus 114 --~~s~~~l~~~f~~va~---a~~~~lPiilYn 141 (313)
T 3dz1_A 114 --LRTDEQITTYFRQATE---AIGDDVPWVLQD 141 (313)
T ss_dssp --CCSHHHHHHHHHHHHH---HHCTTSCEEEEE
T ss_pred --CCCHHHHHHHHHHHHH---hCCCCCcEEEEe
Confidence 2344555555555554 446 99998 5
No 356
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=35.46 E-value=3.3e+02 Score=26.66 Aligned_cols=94 Identities=11% Similarity=0.136 Sum_probs=62.2
Q ss_pred CCHhhHHHHHhhcccccccEEEecCC-------------CCHHHHHHHHHHHHHcCCCCCceEEEeecC------hHhHh
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSYT-------------RHAEDVRQAREYLSKLGDLSQTQIFAKIEN------IEGLT 264 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sfV-------------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt------~~av~ 264 (527)
+|-+|..-.+ .+-+.|+|.|.+..- =|.+++..--+.+.+.- +++.|++=+|+ .++++
T Consensus 34 ~tayDa~sA~-l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~--~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 34 LTCYDASFAA-LLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ--PRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EECCSHHHHH-HHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC--CSSEEEEECCTTSCSSHHHHHH
T ss_pred EeCcCHHHHH-HHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC--CCCCEEEecCCCCCCCHHHHHH
Confidence 4778887775 567899999977621 12333333333333322 56899999998 46788
Q ss_pred hHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 265 HFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 265 nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
|..+++++ ++||-+--|. .+...|++..++|+|++-
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~g 147 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCA 147 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEE
Confidence 88888875 4888886442 224456666789999985
No 357
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=35.40 E-value=1.1e+02 Score=24.28 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=35.6
Q ss_pred HHHHHHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 401 AVRAAIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 401 av~~a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
|.+...+.+.++|++-- .+|.. .+.+ +.++.+||+.++.. .+.... .-.+-.|+..++..+.
T Consensus 38 al~~~~~~~~dlii~D~~~p~~~g~~~~~~l-r~~~~~~ii~~t~~-----------~~~~~~-~~~~~~ga~~~l~KP~ 104 (120)
T 3f6p_A 38 AVEMVEELQPDLILLDIMLPNKDGVEVCREV-RKKYDMPIIMLTAK-----------DSEIDK-VIGLEIGADDYVTKPF 104 (120)
T ss_dssp HHHHHHTTCCSEEEEETTSTTTHHHHHHHHH-HTTCCSCEEEEEES-----------SCHHHH-HHHHHTTCCEEEEESC
T ss_pred HHHHHhhCCCCEEEEeCCCCCCCHHHHHHHH-HhcCCCCEEEEECC-----------CChHHH-HHHHhCCcceeEcCCC
Confidence 34445566788777643 24433 3344 34568999988531 223222 2245678888887655
No 358
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=35.28 E-value=58 Score=28.36 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCcEEEEECC---------CcHHHHHHHhhCCCCCEEEE
Q 036921 398 ASSAVRAAIKVKASVIICFTS---------SGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 398 a~~av~~a~~~~a~~Ivv~T~---------sG~tA~~is~~RP~~PIiAv 438 (527)
+...++.|.+.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 108 ~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV 156 (163)
T 1tq8_A 108 VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIV 156 (163)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEE
Confidence 455567788899999998876 2556777777654 999976
No 359
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=35.22 E-value=50 Score=31.25 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=56.5
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee------c-------ChHhHhhHHHHHHhC-
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI------E-------NIEGLTHFDEILQAA- 273 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI------E-------t~~av~nldeI~~~s- 273 (527)
|.+.+.+.+.+.|++.++.+- .+.++...+.++....+ ..+...+-| . +.+.++.+.+.+...
T Consensus 21 ~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~--~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 97 (272)
T 2y1h_A 21 DLDDVLEKAKKANVVALVAVA-EHSGEFEKIMQLSERYN--GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYK 97 (272)
T ss_dssp THHHHHHHHHHTTEEEEEECC-SSGGGHHHHHHHHHHTT--TTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCC--CCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCC
Confidence 444443455789999877763 34677777777655443 222211111 1 224455555555422
Q ss_pred CEEEEeCCCCcCCCC--c--h-hHHHHH----HHHHHHHHHcCCcEEE-ec
Q 036921 274 DGIILSRGNLGIDLP--P--E-KVFLFQ----KAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 274 DgImIaRgDLg~e~~--~--~-~v~~~q----k~Ii~~c~~~gKpvi~-Tq 314 (527)
+. .+|=|..|++.. . . .....| +..++.|++.|+|+++ +.
T Consensus 98 ~~-~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~ 147 (272)
T 2y1h_A 98 DR-LLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSR 147 (272)
T ss_dssp GG-CSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred CC-EEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 21 123366666652 1 1 123444 4678899999999998 74
No 360
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=35.05 E-value=39 Score=33.56 Aligned_cols=54 Identities=15% Similarity=0.044 Sum_probs=37.0
Q ss_pred CCCHHHHHHHH-HcCCCeEEeecCCCC-----HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 40 SRSVDVISGCL-KAGMSVARFDFSWGN-----TEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 40 ~~~~~~l~~l~-~~G~~v~RiN~shg~-----~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
..+.+.++.|. +.|+|++|+-+.+.. .++..+.++.+=+.+++.| +.+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELG--IYVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHT--CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 35678899986 689999999776532 1223455666666667778 567888764
No 361
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=35.00 E-value=43 Score=35.08 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=33.6
Q ss_pred CCCHHHH-HHHHHcCCCeEEeecCCCCH--------HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 40 SRSVDVI-SGCLKAGMSVARFDFSWGNT--------EYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 40 ~~~~~~l-~~l~~~G~~v~RiN~shg~~--------e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
....+.| +.|.+.|+|++|+-++.... +...+.++.+=+.+++.| +.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~G--i~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERG--YKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence 4567888 89999999999998762211 223333333333445566 66788854
No 362
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=34.88 E-value=1.6e+02 Score=29.32 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=23.3
Q ss_pred CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 307 GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 307 gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
+.|+|. ..+- .-.|+..++..|||+|++..
T Consensus 251 ~ipvia~GGI~------------~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGGLQ------------DALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEEcH
Confidence 789998 6532 34678888889999999974
No 363
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=34.82 E-value=36 Score=34.18 Aligned_cols=53 Identities=9% Similarity=0.001 Sum_probs=36.7
Q ss_pred CCHHHHHHHH-HcCCCeEEeecCCCC-----HHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 41 RSVDVISGCL-KAGMSVARFDFSWGN-----TEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 41 ~~~~~l~~l~-~~G~~v~RiN~shg~-----~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
.+.+.++.|. +.|+|++|+-++.+. .++..+.++.+=+.+++.| +.+++|+-+
T Consensus 54 ~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--i~VIld~H~ 112 (364)
T 1g01_A 54 VNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHD--MYVIVDWHV 112 (364)
T ss_dssp CSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred cCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 4678899997 899999999887421 1223455555555566667 667888775
No 364
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=34.63 E-value=53 Score=33.29 Aligned_cols=61 Identities=8% Similarity=-0.008 Sum_probs=37.7
Q ss_pred CeEEEEecCCCCC--CHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 29 MTKIVGTLGPKSR--SVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 29 ~tkIi~TiGp~~~--~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+.....|+|-.+. -.+..+++.++|.+.+.+++.| +.+.-.+.++.+|++ .|..+.|++|.
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g~d~~l~vDa 196 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPL---LEPGEKAMADA 196 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGG---SCTTCEEEEEC
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHh---cCCCCEEEEEC
Confidence 3455577763111 1244567889999999999998 555555555555554 45445555554
No 365
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=34.50 E-value=42 Score=32.83 Aligned_cols=49 Identities=8% Similarity=-0.051 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+..++|++.|+++.=+|+--...|+..++..-++.+.+..+ ++|.+|+.
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~--~pisIDT~ 86 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD--LPCCLDST 86 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC--CCEEEECS
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC--CeEEEeCC
Confidence 45678999999999999977777888888888888877655 55677876
No 366
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=34.48 E-value=1.6e+02 Score=23.39 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=35.6
Q ss_pred HHHhcCCcEEEEE----CCCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 404 AAIKVKASVIICF----TSSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 404 ~a~~~~a~~Ivv~----T~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
.......+.+++= ..+|.. .+.+.+..|.+||+.++. ..+...+.+ .+-.|+..++..+.
T Consensus 42 ~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~-----------~~~~~~~~~-~~~~ga~~~l~Kp~ 106 (126)
T 1dbw_A 42 FAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITG-----------HGDVPMAVE-AMKAGAVDFIEKPF 106 (126)
T ss_dssp HGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEEC-----------TTCHHHHHH-HHHTTCSEEEESSC
T ss_pred HHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEEC-----------CCCHHHHHH-HHHhCHHHheeCCC
Confidence 3344556766653 235543 566766779999998853 123333332 34568888887654
No 367
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=34.44 E-value=62 Score=30.52 Aligned_cols=50 Identities=22% Similarity=0.255 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHH
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGK 365 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~ 365 (527)
-..+++.|+++|++|.+ |- - +..++..++..|+|+|+-. ||..+.+.+.+
T Consensus 185 ~~~~v~~~~~~G~~v~~WTV----------n---~~~~~~~l~~~GVdgIiTD-------~P~~~~~~l~~ 235 (238)
T 3no3_A 185 HPDWVKDCKVLGMTSNVWTV----------D---DPKLMEEMIDMGVDFITTD-------LPEETQKILHS 235 (238)
T ss_dssp STTHHHHHHHTTCEEEEECC----------C---SHHHHHHHHHHTCSEEEES-------CHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEECC----------C---CHHHHHHHHHcCCCEEECC-------CHHHHHHHHHh
Confidence 35789999999999999 83 1 2245566777899999864 89888777654
No 368
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=34.43 E-value=1.8e+02 Score=28.31 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=55.1
Q ss_pred HHHHHh-CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCC
Q 036921 267 DEILQA-ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGS 341 (527)
Q Consensus 267 deI~~~-sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~ 341 (527)
+..++. .||+++. |=- +..+..++-..+-+.+++.++. ..|+|. +. ..+-+|.-+.+. |-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 28 EWQIEEGSFGLVPC-GTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGAG---------SNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHTTCSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CccHHHHHHHHHHHHHcCC
Confidence 334443 5999874 221 2234445544455555554432 589988 65 334456655554 666799
Q ss_pred cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 342 DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 342 D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|++|+..=--...-+.+.++..+.|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999997543323334677788888877654
No 369
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=34.38 E-value=1.3e+02 Score=29.14 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=26.9
Q ss_pred hhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHH
Q 036921 331 TDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICA 368 (527)
Q Consensus 331 ~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~ 368 (527)
.|+..+...|+|++++..--.....|.++++.+.+.+.
T Consensus 222 e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 222 ADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp HHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 46667777799999997443333568888887776654
No 370
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=34.32 E-value=33 Score=35.18 Aligned_cols=46 Identities=17% Similarity=0.253 Sum_probs=36.2
Q ss_pred EecCCCCCCHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 34 GTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 34 ~TiGp~~~~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
+.+|-.....+.++.++++|++++=++.+||..+...++|+.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 3445444557889999999999999999999887777778777764
No 371
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=34.30 E-value=2.5e+02 Score=25.72 Aligned_cols=31 Identities=10% Similarity=0.032 Sum_probs=24.1
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcC
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLG 246 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~ 246 (527)
.+.+.|+|+|=+.+- ...++.++++.+.+.|
T Consensus 23 ~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~g 53 (260)
T 1k77_A 23 AARKAGFDAVEFLFP-YNYSTLQIQKQLEQNH 53 (260)
T ss_dssp HHHHHTCSEEECSCC-TTSCHHHHHHHHHHTT
T ss_pred HHHHhCCCEEEecCC-CCCCHHHHHHHHHHcC
Confidence 557899999988753 3456888999998876
No 372
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=34.24 E-value=1.1e+02 Score=28.88 Aligned_cols=104 Identities=15% Similarity=0.088 Sum_probs=60.0
Q ss_pred CCCChHhhhhHHHHHHhCCcEEEeCCccc---cCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHH
Q 036921 323 LRPTRAEATDVANAVLDGSDAILLGAETL---RGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIAS 399 (527)
Q Consensus 323 p~PtraEv~Dv~nav~~g~D~imLs~Eta---~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~ 399 (527)
..|+..-+.++..|+.+|||.|-+----. .|+| -+..+-+..+++.+... --+..+. . ...+ +.-..
T Consensus 67 ~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~-~lkvIle-----t-~~l~--~e~i~ 136 (220)
T 1ub3_A 67 YQEKEVKALEAALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQA-VLKVILE-----T-GYFS--PEEIA 136 (220)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTS-EEEEECC-----G-GGSC--HHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCC-CceEEEe-----c-CCCC--HHHHH
Confidence 34556677999999999999986532211 1333 55666777776665432 1111111 0 0112 23355
Q ss_pred HHHHHHHhcCCcEEEEECCCcHH--------HHHHHh-hCCCCCEEEE
Q 036921 400 SAVRAAIKVKASVIICFTSSGRA--------ARLIAK-YRPTMPVLSV 438 (527)
Q Consensus 400 ~av~~a~~~~a~~Ivv~T~sG~t--------A~~is~-~RP~~PIiAv 438 (527)
.|+++|.+.+|+. |=|.+|.+ .+.+.+ -.+++||.+-
T Consensus 137 ~a~~ia~eaGADf--VKTsTGf~~~gat~~dv~~m~~~vg~~v~Vkaa 182 (220)
T 1ub3_A 137 RLAEAAIRGGADF--LKTSTGFGPRGASLEDVALLVRVAQGRAQVKAA 182 (220)
T ss_dssp HHHHHHHHHTCSE--EECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHhCCCE--EEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEE
Confidence 6888999999994 55665543 233332 2567888864
No 373
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=34.21 E-value=62 Score=33.10 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=42.6
Q ss_pred CeEEEEecCCCCC-CH----HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 29 MTKIVGTLGPKSR-SV----DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 29 ~tkIi~TiGp~~~-~~----~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+....+|+|-... ++ +..+++.+.|.+.+.+...|++.+...+.++.+|++. |..+.|++|.
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G~d~~l~vDa 227 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---GDEFPLMVDA 227 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---CCCCeEEEEC
Confidence 4556677643312 44 3456678899999999999888887888888888763 4345555554
No 374
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=34.16 E-value=3.3e+02 Score=26.47 Aligned_cols=108 Identities=10% Similarity=0.016 Sum_probs=62.9
Q ss_pred hhhHHHHHHhCCcEEEeCCccc-------cCCChHHHHHHHHHHHHHHhhccchhh-hhhhhhcccCCCCChHHHHHHHH
Q 036921 330 ATDVANAVLDGSDAILLGAETL-------RGLYPVETISIVGKICAEAEKVFNQDL-YFKKTVKCVGEPMTHLESIASSA 401 (527)
Q Consensus 330 v~Dv~nav~~g~D~imLs~Eta-------~G~yP~e~V~~~~~i~~~aE~~~~~~~-~~~~~~~~~~~~~~~~~~ia~~a 401 (527)
..|+-.++..|+|.|++..-++ .++=+.|.++.+.++++.+-+.-..-. .............+..+ .+...
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~-~~~~~ 164 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPR-QVAWV 164 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHH-HHHHH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHH-HHHHH
Confidence 3578889999999999854332 455677888888888877665321100 00000000000112233 44455
Q ss_pred HHHHHhcCCcEEEEECCCcH-----HHHHHHhhCC---CCCEEEE
Q 036921 402 VRAAIKVKASVIICFTSSGR-----AARLIAKYRP---TMPVLSV 438 (527)
Q Consensus 402 v~~a~~~~a~~Ivv~T~sG~-----tA~~is~~RP---~~PIiAv 438 (527)
++.+.+.+++.|.+..+.|. ...++...|- .+|+-.-
T Consensus 165 ~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H 209 (302)
T 2ftp_A 165 ARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGH 209 (302)
T ss_dssp HHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEE
T ss_pred HHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 66677889999988888774 3555666654 4565543
No 375
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=34.15 E-value=3.2e+02 Score=26.39 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=68.1
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++++ . |..+....+...-..|++.+...++. . .-++.+...+++++-...+ +
T Consensus 81 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~-~~~~~~~a~~l~~~~~~~~-~ 144 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---G-MSGAIAKAEELAKTDQRYF-V 144 (313)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEE-C
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCEE-e
Confidence 367788999999886 2 11111223444455699988776431 1 2356665555544321101 1
Q ss_pred hhhhhhhhcccCCCCChH--HH-HHHHHHHHHHhc--CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTHL--ES-IASSAVRAAIKV--KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~--~~-ia~~av~~a~~~--~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
...| .++. .. ....+.++..++ +.+.|||.+-+|.++.-+++ ..|...|+++-+
T Consensus 145 ~~~~----------~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~ 207 (313)
T 2q3b_A 145 PQQF----------ENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEP 207 (313)
T ss_dssp CCTT----------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCC----------CChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEee
Confidence 0001 1121 11 233366777776 37899999999999776665 469999999854
No 376
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=33.94 E-value=1.4e+02 Score=27.66 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=52.2
Q ss_pred hcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee------c-ChHhHhhHHHHHHh--CCEEEEeCCCCcC
Q 036921 215 WGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI------E-NIEGLTHFDEILQA--ADGIILSRGNLGI 285 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI------E-t~~av~nldeI~~~--sDgImIaRgDLg~ 285 (527)
.+.+.|++.++..- .+.++...+.++..+.+ ++....-+ + +.+.++.+++.+.. .-.+-| |..|+
T Consensus 27 ~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~---~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~i--GEiGl 100 (259)
T 1zzm_A 27 RAAQAGVGKIIVPA-TEAENFARVLALAENYQ---PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAV--GEIGL 100 (259)
T ss_dssp HHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT---TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEE--EEEEE
T ss_pred HHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC---CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEE--EEecc
Confidence 45789999876652 34677777777655432 22222222 1 22445666666654 223333 55555
Q ss_pred CCCch-hHHHHH----HHHHHHHHHcCCcEEE-ec
Q 036921 286 DLPPE-KVFLFQ----KAALYKCNMAGKPAVV-TR 314 (527)
Q Consensus 286 e~~~~-~v~~~q----k~Ii~~c~~~gKpvi~-Tq 314 (527)
+.... .-...| +..++.|.+.|+|+++ +.
T Consensus 101 d~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~ 135 (259)
T 1zzm_A 101 DLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSR 135 (259)
T ss_dssp ECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 54221 112333 4667789999999999 74
No 377
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=33.84 E-value=3.3e+02 Score=26.67 Aligned_cols=84 Identities=11% Similarity=0.148 Sum_probs=54.3
Q ss_pred hhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCc
Q 036921 264 THFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSD 342 (527)
Q Consensus 264 ~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D 342 (527)
.++++++..+|.++- ++ .|..-...+..|.++|+|+++ |--+ +..+...+..+... =
T Consensus 80 ~dl~~ll~~aDVvID----FT-------~p~a~~~~~~~~l~~Gv~vViGTTG~---------~~e~~~~L~~aa~~--~ 137 (288)
T 3ijp_A 80 DDPESAFSNTEGILD----FS-------QPQASVLYANYAAQKSLIHIIGTTGF---------SKTEEAQIADFAKY--T 137 (288)
T ss_dssp SCHHHHTTSCSEEEE----CS-------CHHHHHHHHHHHHHHTCEEEECCCCC---------CHHHHHHHHHHHTT--S
T ss_pred CCHHHHhcCCCEEEE----cC-------CHHHHHHHHHHHHHcCCCEEEECCCC---------CHHHHHHHHHHhCc--C
Confidence 478888877787762 22 244556788899999999999 6322 34445555555443 4
Q ss_pred EEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 343 AILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 343 ~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
+++.+.-.++| |-.|.++++++=+.+.
T Consensus 138 ~~~~a~N~SiG------v~ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 138 TIVKSGNMSLG------VNLLANLVKRAAKALD 164 (288)
T ss_dssp EEEECSCCCHH------HHHHHHHHHHHHHHSC
T ss_pred CEEEECCCcHH------HHHHHHHHHHHHHhcC
Confidence 56777666666 4456666776665553
No 378
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=33.82 E-value=4.7e+02 Score=28.02 Aligned_cols=189 Identities=15% Similarity=0.065 Sum_probs=107.4
Q ss_pred CCCHhhHHHHHhhcccccccEEEecC----CC-----CHHHHHHHHHHHHHcCCCCCceEEEeec--ChHhH--------
Q 036921 203 TLSDKDKEVISSWGVQNKIDFLSLSY----TR-----HAEDVRQAREYLSKLGDLSQTQIFAKIE--NIEGL-------- 263 (527)
Q Consensus 203 ~lt~~D~~di~~~~~~~g~d~I~~sf----V~-----s~~dv~~lr~~l~~~~~~~~~~IiaKIE--t~~av-------- 263 (527)
.++..|+..|.....+.|++.|=+-+ +. ++++-+.++.+... . .++.+.+-+= +..|.
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~--~~~~l~~L~R~~N~~G~~~ypddv~ 119 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-M--PNSRLQMLLRGQNLLGYRHYNDEVV 119 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-C--TTSCEEEEECGGGTTSSSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-C--CCCEEEEEeccccccCcccCccccc
Confidence 35666666665555678999987753 11 45555555554432 2 4555555551 11222
Q ss_pred -hhHHHHHHh-CCEEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHH-HHH
Q 036921 264 -THFDEILQA-ADGIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVAN-AVL 338 (527)
Q Consensus 264 -~nldeI~~~-sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~n-av~ 338 (527)
.+++..++. .|.|=| +-.|+ .-.+..++.++++|+.+-.+ + |+...+.=+...+.+++. +..
T Consensus 120 ~~~ve~a~~aGvd~vrIf~s~sd~----------~ni~~~i~~ak~~G~~v~~~-i--~~~~~~~~~~e~~~~~a~~l~~ 186 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFDAMNDP----------RNMAHAMAAVKKAGKHAQGT-I--CYTISPVHTVEGYVKLAGQLLD 186 (539)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEE-E--ECCCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEehhHH----------HHHHHHHHHHHHCCCeEEEE-E--EeeeCCCCCHHHHHHHHHHHHH
Confidence 123444444 265444 33333 23468899999999987321 0 222334445666777776 556
Q ss_pred hCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECC
Q 036921 339 DGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTS 418 (527)
Q Consensus 339 ~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~ 418 (527)
.|+|.|.|. +|+=+-.|-++-+.+..+.++.-.......+.++ +. -+|.+...+|.+.+|+.| =-|-
T Consensus 187 ~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hn---------d~--GlAvAN~laAveAGa~~V-D~ti 253 (539)
T 1rqb_A 187 MGADSIALK-DMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHS---------TT--GVTEVSLMKAIEAGVDVV-DTAI 253 (539)
T ss_dssp TTCSEEEEE-ETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBC---------TT--SCHHHHHHHHHHTTCSEE-EEBC
T ss_pred cCCCEEEeC-CCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCC---------CC--ChHHHHHHHHHHhCCCEE-EEec
Confidence 799999997 7777788999999988887765201111111121 11 234445556777888843 3343
Q ss_pred Cc
Q 036921 419 SG 420 (527)
Q Consensus 419 sG 420 (527)
.|
T Consensus 254 ~g 255 (539)
T 1rqb_A 254 SS 255 (539)
T ss_dssp GG
T ss_pred cc
Confidence 33
No 379
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=33.65 E-value=33 Score=35.34 Aligned_cols=52 Identities=12% Similarity=0.213 Sum_probs=35.6
Q ss_pred CHHHHHHHHHcCCCeEEeecCC-------CCH--HH-HHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSW-------GNT--EY-HQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~sh-------g~~--e~-~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
+.+.++.|.+.|+|++||-++. |.+ +. ..+.++++=+.+++.| +.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G--i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS--LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT--CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC--CEEEEECCC
Confidence 4688999999999999997752 111 11 4555555555566667 677888763
No 380
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.39 E-value=1.4e+02 Score=29.30 Aligned_cols=93 Identities=12% Similarity=0.054 Sum_probs=58.8
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHH-HHHcCCCCCceEEEee---cChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREY-LSKLGDLSQTQIFAKI---ENIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~-l~~~~~~~~~~IiaKI---Et~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++. +--|.++=.++-+. .+..+ .+++||+-+ -|.++++......+. +||+|+.+-.
T Consensus 32 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 32 DDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ--RRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT--TSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC--CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 47789999998753 33345555454444 34444 578888877 466777666666555 5999986554
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
..- .+.+.+...-+.|. .+.+.|+++
T Consensus 110 y~~-~~~~~l~~~f~~va---~a~~lPiil 135 (300)
T 3eb2_A 110 YFP-LKDAQIESYFRAIA---DAVEIPVVI 135 (300)
T ss_dssp SSC-CCHHHHHHHHHHHH---HHCSSCEEE
T ss_pred CCC-CCHHHHHHHHHHHH---HHCCCCEEE
Confidence 432 34456555555554 445799998
No 381
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=33.37 E-value=2.1e+02 Score=29.27 Aligned_cols=143 Identities=13% Similarity=0.124 Sum_probs=88.4
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee-cCh-HhHhhHHHHHHhCCEEEEeCCCCcC
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI-ENI-EGLTHFDEILQAADGIILSRGNLGI 285 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI-Et~-~av~nldeI~~~sDgImIaRgDLg~ 285 (527)
-.+.+. ...+.|+|.|-++ |.+.++.+.++.+-.. .+++++|-| -+. .++. .+-.-.|.+=|-||.+|-
T Consensus 48 tv~Qi~-~l~~aG~diVRva-vp~~~~a~al~~I~~~----~~vPlvaDiHf~~~lal~---a~e~G~dklRINPGNig~ 118 (366)
T 3noy_A 48 TLNQIK-RLYEAGCEIVRVA-VPHKEDVEALEEIVKK----SPMPVIADIHFAPSYAFL---SMEKGVHGIRINPGNIGK 118 (366)
T ss_dssp HHHHHH-HHHHTTCCEEEEE-CCSHHHHHHHHHHHHH----CSSCEEEECCSCHHHHHH---HHHTTCSEEEECHHHHSC
T ss_pred HHHHHH-HHHHcCCCEEEeC-CCChHHHHHHHHHHhc----CCCCEEEeCCCCHHHHHH---HHHhCCCeEEECCcccCc
Confidence 344554 4468999999998 5678888888775544 468999988 333 3332 222237999999999883
Q ss_pred CCCchhHHHHHHHHHHHHHHcCCcEEE-ec--chhh--hhcCCCCChHhh-----hhHHHHHHhCCcEEEeCCccccCCC
Q 036921 286 DLPPEKVFLFQKAALYKCNMAGKPAVV-TR--VVDS--MTDNLRPTRAEA-----TDVANAVLDGSDAILLGAETLRGLY 355 (527)
Q Consensus 286 e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq--~LeS--M~~~p~PtraEv-----~Dv~nav~~g~D~imLs~Eta~G~y 355 (527)
-++ -+.++++|+++|+|+=+ .+ =|+. |.+...||...+ ..+.-+-..|+|-+.+|--. .-
T Consensus 119 ---~~~----~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~---S~ 188 (366)
T 3noy_A 119 ---EEI----VREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKG---SD 188 (366)
T ss_dssp ---HHH----HHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC---SS
T ss_pred ---hhH----HHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec---CC
Confidence 233 36799999999999655 22 2221 111123454333 12233555688889888443 34
Q ss_pred hHHHHHHHHHHHHH
Q 036921 356 PVETISIVGKICAE 369 (527)
Q Consensus 356 P~e~V~~~~~i~~~ 369 (527)
+..+|+.-+.+.++
T Consensus 189 v~~~i~ayr~la~~ 202 (366)
T 3noy_A 189 VLQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 55666655555444
No 382
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=33.35 E-value=1.5e+02 Score=30.08 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=42.9
Q ss_pred CCeEEEEecCCCCCCHH----HHHHHHHc-CCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 28 AMTKIVGTLGPKSRSVD----VISGCLKA-GMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 28 ~~tkIi~TiGp~~~~~~----~l~~l~~~-G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+...-+|+|- .+++ ..+++++. |.+.+.+.....+.++-.+.++.+|++ .|..+.|++|..
T Consensus 155 ~~v~~y~s~g~--~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a---~G~~~~l~vDaN 221 (383)
T 3toy_A 155 RPIPAYDSYGV--LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRAL---LGPDIALMLDFN 221 (383)
T ss_dssp CCEEEEEECSS--CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred CceEEeEecCC--CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHH---hCCCCeEEEeCC
Confidence 44566777664 3443 44567778 999999999887888777777777765 454456666654
No 383
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=33.27 E-value=57 Score=31.47 Aligned_cols=49 Identities=22% Similarity=0.248 Sum_probs=37.1
Q ss_pred HhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecch
Q 036921 263 LTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVV 316 (527)
Q Consensus 263 v~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~L 316 (527)
++.+.++++.+|++.|+.|=+ -++.......+++.+++.++|+++ --++
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlDpv~~ 96 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLDPVGA 96 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEECTTB
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEcCccc
Confidence 556788888999999987754 334445666788889999999998 6554
No 384
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=33.17 E-value=3.8e+02 Score=26.79 Aligned_cols=145 Identities=10% Similarity=0.044 Sum_probs=79.8
Q ss_pred hcccccccEEEec----CCC--C----HHHHHHHHHHHHHcCCCCCceEEE------------eecC------hHhHhhH
Q 036921 215 WGVQNKIDFLSLS----YTR--H----AEDVRQAREYLSKLGDLSQTQIFA------------KIEN------IEGLTHF 266 (527)
Q Consensus 215 ~~~~~g~d~I~~s----fV~--s----~~dv~~lr~~l~~~~~~~~~~Iia------------KIEt------~~av~nl 266 (527)
.+.+.|+++|-+. +-. + .+++.++++.+.+.| -.+..+. .+-+ ..+++.+
T Consensus 41 ~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~G--L~i~~~~~~~f~~p~~~~g~l~spd~~~r~~~i~~~ 118 (393)
T 1xim_A 41 KLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETG--LIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKV 118 (393)
T ss_dssp HHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHT--CBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHH
T ss_pred HHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhC--CEEEEEecCCcCCcccccCCCCCCCHHHHHHHHHHH
Confidence 5678999999887 433 2 578999999999887 3332221 1111 3345555
Q ss_pred HHHHHhC-----CEEEEeCCCCcCCC----C----chhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhh
Q 036921 267 DEILQAA-----DGIILSRGNLGIDL----P----PEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEA 330 (527)
Q Consensus 267 deI~~~s-----DgImIaRgDLg~e~----~----~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv 330 (527)
...++.+ +.|.+-.|--|.+. + ++.+...-+++...+.++ |..+.+ ....+..-.+..+|-.++
T Consensus 119 ~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~~~~~~~~~~~~t~~~~ 198 (393)
T 1xim_A 119 LRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGHA 198 (393)
T ss_dssp HHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCCCCCCCcCCCHHHH
Confidence 5555543 66766555322222 1 235566667888888887 666655 321111102234565666
Q ss_pred hhHHHHHHhCCcE-EEeCCcc----ccCCChHHHHHHH
Q 036921 331 TDVANAVLDGSDA-ILLGAET----LRGLYPVETISIV 363 (527)
Q Consensus 331 ~Dv~nav~~g~D~-imLs~Et----a~G~yP~e~V~~~ 363 (527)
-++...+ |.+. +-+.-+| ..|.-|.+.++.+
T Consensus 199 ~~ll~~v--~~~~~vgl~lD~gH~~~~g~d~~~~l~~~ 234 (393)
T 1xim_A 199 IAFVQEL--ERPELFGINPETGHEQMSNLNFTQGIAQA 234 (393)
T ss_dssp HHHHTTS--SSGGGEEECCBHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHh--CCccceEEEEccCCccccCCCHHHHHHHh
Confidence 5555443 4444 5555554 3455565554443
No 385
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=33.10 E-value=83 Score=29.96 Aligned_cols=45 Identities=7% Similarity=0.027 Sum_probs=39.0
Q ss_pred HHHHHHHHHcCCCeE--EeecCCCCHHHHHHHHHHHHHHHHHcCCce
Q 036921 43 VDVISGCLKAGMSVA--RFDFSWGNTEYHQETLENLKAAVKTTKKLC 87 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~--RiN~shg~~e~~~~~i~~ir~~~~~~~~~v 87 (527)
.+.+++.+++|++.+ .+|....+.++..+.+..+.++++++|.++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~v 148 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPL 148 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCE
Confidence 677899999999999 999988888888888888888888888665
No 386
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=33.08 E-value=3.4e+02 Score=26.16 Aligned_cols=93 Identities=5% Similarity=0.029 Sum_probs=58.0
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHHHHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREYLSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+|.++.|+|+|++. +.-|.++=.++-+...+.- .. ||+-+= |.++++.....-+. +||+|+.+-..
T Consensus 26 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~--~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 101 (286)
T 2r91_A 26 KNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAA--RR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPYY 101 (286)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHC--SS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCS
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHh--CC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 47789999998873 4455656555555544432 23 888873 46666665555444 49999976554
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.--.+.+.+...-+.|. .+.+.|+++ .
T Consensus 102 ~~~~s~~~l~~~f~~va---~a~~lPiilYn 129 (286)
T 2r91_A 102 FPRLSERQIAKYFRDLC---SAVSIPVFLYN 129 (286)
T ss_dssp STTCCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHH---HhcCCCEEEEe
Confidence 32124455555555554 456899998 5
No 387
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=33.07 E-value=76 Score=31.52 Aligned_cols=50 Identities=24% Similarity=0.226 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCCeEEee-cCCCC----------H-HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 43 VDVISGCLKAGMSVARFD-FSWGN----------T-EYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN-~shg~----------~-e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+.|+.|.+.|+|++|+- |+++. + +...+.++.+=+.+++.| +.+++||.
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~G--i~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYG--IHLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTT--CEEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEec
Confidence 457888999999999986 44321 1 334555666656677777 66677765
No 388
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=32.95 E-value=39 Score=32.03 Aligned_cols=49 Identities=14% Similarity=0.057 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCeEEeecC-CC----------------CHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 43 VDVISGCLKAGMSVARFDFS-WG----------------NTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~s-hg----------------~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
.+.|+.|.+.|+|+.|+=++ ++ ..+.|.+.++.+=+.+++.| +-+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G--i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN--ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC--CeEEEEe
Confidence 35588899999999998432 11 12356667777777777788 5566665
No 389
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=32.79 E-value=1.1e+02 Score=25.45 Aligned_cols=62 Identities=16% Similarity=0.122 Sum_probs=38.1
Q ss_pred HHHHHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 402 VRAAIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 402 v~~a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
.+...+...++|++-. .+|.. ++.+-+..|.+||+.++. ..+.....+ .+-.|+.-++..+.
T Consensus 59 l~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~-----------~~~~~~~~~-~~~~g~~~~l~Kp~ 125 (150)
T 4e7p_A 59 IQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTT-----------FKRAGYFER-AVKAGVDAYVLKER 125 (150)
T ss_dssp HHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEES-----------CCCHHHHHH-HHHTTCSEEEETTS
T ss_pred HHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeC-----------CCCHHHHHH-HHHCCCcEEEecCC
Confidence 3344556678777643 34543 566777789999998853 123333333 35678888887654
No 390
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=32.74 E-value=1.5e+02 Score=29.86 Aligned_cols=147 Identities=12% Similarity=0.074 Sum_probs=82.4
Q ss_pred HHHHhhcccccccEEEecCC------CC----HHHHHHHHHHHHHcCCCCCceEEEe------------ecC------hH
Q 036921 210 EVISSWGVQNKIDFLSLSYT------RH----AEDVRQAREYLSKLGDLSQTQIFAK------------IEN------IE 261 (527)
Q Consensus 210 ~di~~~~~~~g~d~I~~sfV------~s----~~dv~~lr~~l~~~~~~~~~~IiaK------------IEt------~~ 261 (527)
+.+. .+.+.|+|+|=+... .+ .+++.++++.+.+.| -.+..+.- +-+ ..
T Consensus 37 e~l~-~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G--L~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~ 113 (394)
T 1xla_A 37 EAVH-KLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTG--LKVPMVTTNLFSHPVFKDGGFTSNDRSIRRF 113 (394)
T ss_dssp HHHH-HHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHC--CBCCEEECCCSSSGGGTTCSTTCSSHHHHHH
T ss_pred HHHH-HHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcC--CeEEEEecCccCCccccCCccCCCCHHHHHH
Confidence 3453 667899999977542 12 467899999999887 33333321 211 34
Q ss_pred hHhhHHHHHHhC-----CEEEEeCCCCcCC----CC----chhHHHHHHHHHHHHHHcC--CcEEE-ecchhhhhcCCCC
Q 036921 262 GLTHFDEILQAA-----DGIILSRGNLGID----LP----PEKVFLFQKAALYKCNMAG--KPAVV-TRVVDSMTDNLRP 325 (527)
Q Consensus 262 av~nldeI~~~s-----DgImIaRgDLg~e----~~----~~~v~~~qk~Ii~~c~~~g--Kpvi~-Tq~LeSM~~~p~P 325 (527)
+++.+...++.+ +.|.+-.|--+.+ .+ ++.+...-+++...|.++| ..+.+ +...+..-.+..+
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~ 193 (394)
T 1xla_A 114 ALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLP 193 (394)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSC
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCccccCC
Confidence 455666555543 6777765532221 12 2455666678888888999 66665 4321111123346
Q ss_pred ChHhhhhHHHHHHhCCc-EEEeCCcc----ccCCChHHHHH
Q 036921 326 TRAEATDVANAVLDGSD-AILLGAET----LRGLYPVETIS 361 (527)
Q Consensus 326 traEv~Dv~nav~~g~D-~imLs~Et----a~G~yP~e~V~ 361 (527)
|-.++-++...+ +.+ .+-+.-+| ..|.-|.+.++
T Consensus 194 t~~~~~~li~~v--~~pn~vgl~lD~~H~~~~g~d~~~~i~ 232 (394)
T 1xla_A 194 TVGHGLAFIEQL--EHGDIVGLNPETGHEQMAGLNFTHGIA 232 (394)
T ss_dssp SHHHHHHHHTTC--TTGGGEEECCBHHHHHTTTCCHHHHHH
T ss_pred CHHHHHHHHHHh--CCCCceEEEEecCcccccCCCHHHHHH
Confidence 666666665544 333 25555555 34555655443
No 391
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=32.71 E-value=3.1e+02 Score=26.05 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=72.9
Q ss_pred HHHcCCcEEEecchhhhhcCCCC-----ChHhh----hhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhc
Q 036921 303 CNMAGKPAVVTRVVDSMTDNLRP-----TRAEA----TDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKV 373 (527)
Q Consensus 303 c~~~gKpvi~Tq~LeSM~~~p~P-----traEv----~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~ 373 (527)
|+....|+.+ |+. |+. +..|+ .|+..+...|+|++++..=|..|.--.++.+.|-..+. ..
T Consensus 50 ~~~~~ipV~v------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~---~~ 119 (224)
T 2bdq_A 50 LHEKGISVAV------MIR-PRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ---GL 119 (224)
T ss_dssp HHHTTCEEEE------ECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT---TC
T ss_pred hhhcCCceEE------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC---CC
Confidence 7888999987 333 322 45565 78889999999999999999999988777665554443 21
Q ss_pred cchhhhhhhhhcccCCCCChHHHHHHHHHHHHHhcCCcEEEEECCCcHH-----------HHHHHhhCCCCCEEEE
Q 036921 374 FNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRA-----------ARLIAKYRPTMPVLSV 438 (527)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~a~~Ivv~T~sG~t-----------A~~is~~RP~~PIiAv 438 (527)
..-|++-.+..+ ..++. .|.+...+++.+-|. |..|.. .+++.+..++.-|++.
T Consensus 120 ---~vTFHRAFD~~~-~~d~~-----~ale~L~~lGv~rIL--TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~G 184 (224)
T 2bdq_A 120 ---PLVFHMAFDVIP-KSDQK-----KSIDQLVALGFTRIL--LHGSSNGEPIIENIKHIKALVEYANNRIEIMVG 184 (224)
T ss_dssp ---CEEECGGGGGSC-TTTHH-----HHHHHHHHTTCCEEE--ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEEC
T ss_pred ---eEEEECchhccC-CcCHH-----HHHHHHHHcCCCEEE--CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeC
Confidence 122333222221 11232 245666778999866 443322 3566667777778864
No 392
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.68 E-value=1.7e+02 Score=23.60 Aligned_cols=60 Identities=17% Similarity=0.111 Sum_probs=36.0
Q ss_pred HHHhcCCcEEEEE----CCCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 404 AAIKVKASVIICF----TSSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 404 ~a~~~~a~~Ivv~----T~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
...+...+++++= ..+|.. .+.+.+..|.+||+.++. ..+.....+ .+..|+.-++..+.
T Consensus 44 ~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~-----------~~~~~~~~~-~~~~ga~~~l~Kp~ 108 (133)
T 3b2n_A 44 LIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTT-----------FKRPGYFEK-AVVNDVDAYVLKER 108 (133)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEES-----------CCCHHHHHH-HHHTTCSEEEETTS
T ss_pred HHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEec-----------CCCHHHHHH-HHHcCCcEEEECCC
Confidence 3344567876653 235543 566766779999999853 123333333 34568888887654
No 393
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=32.58 E-value=2.1e+02 Score=32.02 Aligned_cols=102 Identities=15% Similarity=0.154 Sum_probs=71.7
Q ss_pred CHhhHHHHHhhcccccccEEEe-------------------cCCCCH--HHHHHHHHHHHHcCCCCCceEEEeecChHhH
Q 036921 205 SDKDKEVISSWGVQNKIDFLSL-------------------SYTRHA--EDVRQAREYLSKLGDLSQTQIFAKIENIEGL 263 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~-------------------sfV~s~--~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av 263 (527)
++.-++-|. ||.++|+++|.+ +|++-- -|+.+|.++-.++| +.|+.-.|+..++
T Consensus 370 te~~K~YID-FAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKG----V~iilw~~t~~~~ 444 (738)
T 2d73_A 370 TANVKRYID-FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKG----IKMMMHHETSASV 444 (738)
T ss_dssp HHHHHHHHH-HHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTT----CEEEEEEECTTBH
T ss_pred HHHHHHHHH-HHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCC----CEEEEEEcCCCch
Confidence 555677774 999999999999 221111 24999999988855 8999999998865
Q ss_pred hh----HHHHHHh-----CCEEEEeC-CCCcCCCCc----hhHHHHHHHHHHHHHHcCCcEEE
Q 036921 264 TH----FDEILQA-----ADGIILSR-GNLGIDLPP----EKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 264 ~n----ldeI~~~-----sDgImIaR-gDLg~e~~~----~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
.| +|+..+. ..||-++= ||+ ++-+- ..+.....++++.|.+++.-|..
T Consensus 445 ~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 445 RNYERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 54 4555543 26887742 121 11111 45778889999999999998887
No 394
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=32.53 E-value=2.5e+02 Score=28.41 Aligned_cols=120 Identities=14% Similarity=0.148 Sum_probs=66.5
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++++ - |..+....+...-..|++.+...+ . .-++++...+++++- ..++
T Consensus 125 ~a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~~-----~-~~~a~~~a~~~~~~~-g~~~ 186 (398)
T 4d9i_A 125 RGVAWAAQQLGQNAVIYM-----------PKGSAQERVDAILNLGAECIVTDM-----N-YDDTVRLTMQHAQQH-GWEV 186 (398)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------CTTCCHHHHHHHHTTTCEEEECSS-----C-HHHHHHHHHHHHHHH-TCEE
T ss_pred HHHHHHHHHcCCCEEEEE-----------eCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHHc-CCEE
Confidence 3567789999999887 2 222223344455567999876653 2 357777766665442 1111
Q ss_pred hhh----hhhhhhcccCCCCChHHHHHHHHHHHHHhcC-----CcEEEEECCCcHHHHHHHhh------CCCCCEEEEee
Q 036921 376 QDL----YFKKTVKCVGEPMTHLESIASSAVRAAIKVK-----ASVIICFTSSGRAARLIAKY------RPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~----~~~~~~~~~~~~~~~~~~ia~~av~~a~~~~-----a~~Ivv~T~sG~tA~~is~~------RP~~PIiAv~~ 440 (527)
... .|.+. +.....-....+.++..+++ .+.|||.+-+|.++.-++++ .|...|+++-+
T Consensus 187 v~~~~~~g~~~~------~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep 260 (398)
T 4d9i_A 187 VQDTAWEGYTKI------PTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEP 260 (398)
T ss_dssp CCSSCBTTBCHH------HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEE
T ss_pred ecCcccCCcCCC------CchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEe
Confidence 100 01000 00011112223344544442 68999999999997776654 36788998743
No 395
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=32.51 E-value=3.2e+02 Score=26.63 Aligned_cols=117 Identities=16% Similarity=0.139 Sum_probs=67.4
Q ss_pred HHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccc
Q 036921 297 KAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFN 375 (527)
Q Consensus 297 k~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~ 375 (527)
.-+...|+..|.++.+ -- ..+.-..+...-..|++.+...+. | -++.+...+++++-. .+
T Consensus 87 ~alA~~a~~~G~~~~iv~p-----------~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~~- 147 (323)
T 1v71_A 87 QAIALSAKILGIPAKIIMP-----------LDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-LT- 147 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEE-----------TTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-CB-
T ss_pred HHHHHHHHHcCCCEEEECC-----------CCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-CE-
Confidence 3567789999999886 21 111122345555669998866543 2 235555555544321 11
Q ss_pred hhhhhhhhhcccCCCCChHHHHHHHHHHHHHhc-CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 376 QDLYFKKTVKCVGEPMTHLESIASSAVRAAIKV-KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
|-..|.+ | .........+.++..++ +.+.||+.+-+|.|+.-+++ +.|.+.|+++-+
T Consensus 148 ~i~~~~n-------~-~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~ 209 (323)
T 1v71_A 148 IIPPYDH-------P-HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEP 209 (323)
T ss_dssp CCCSSSS-------H-HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred ecCCCCC-------c-chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1111110 0 01122233356666665 47999999999999776665 479999999854
No 396
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=32.41 E-value=66 Score=31.45 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=38.5
Q ss_pred hHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecch
Q 036921 262 GLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVV 316 (527)
Q Consensus 262 av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~L 316 (527)
+.+-++++++.+|++.|+.|=|. ++........++.++++++|+++ --++
T Consensus 48 ~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlDPVg~ 98 (273)
T 3dzv_A 48 DPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVDLVGY 98 (273)
T ss_dssp CGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEECTTT
T ss_pred CHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEchhhc
Confidence 35678899999999999988763 34455667777889999999998 5443
No 397
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=32.39 E-value=70 Score=31.46 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=43.2
Q ss_pred CCeEEEEecC--CCC-------CC----HHHHHHHHHcCCCeEEeec-CC--C-----CHHHHHHHHHHHHHHHHHcCCc
Q 036921 28 AMTKIVGTLG--PKS-------RS----VDVISGCLKAGMSVARFDF-SW--G-----NTEYHQETLENLKAAVKTTKKL 86 (527)
Q Consensus 28 ~~tkIi~TiG--p~~-------~~----~~~l~~l~~~G~~v~RiN~-sh--g-----~~e~~~~~i~~ir~~~~~~~~~ 86 (527)
.+|+|++-|. |-| .+ .+..++|++.|+++.=+|. |- | ..||+.+++.-++...++ +
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~-- 80 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-G-- 80 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-T--
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-C--
Confidence 3567777663 422 12 2456789999999999998 32 1 257788888888887664 4
Q ss_pred eEEEecCCCCeE
Q 036921 87 CAVMLDTVGPEL 98 (527)
Q Consensus 87 v~i~~Dl~Gpki 98 (527)
+.|.+|+.-|++
T Consensus 81 ~piSIDT~~~~v 92 (280)
T 1eye_A 81 ITVSIDTMRADV 92 (280)
T ss_dssp CCEEEECSCHHH
T ss_pred CEEEEeCCCHHH
Confidence 667889886554
No 398
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=32.38 E-value=1.7e+02 Score=22.75 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=35.4
Q ss_pred HHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 405 AIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 405 a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
......+.|++=- .+|.. .+.+.+..|.+||+.++. ..+.....+ .+-.|+..++..+.
T Consensus 43 ~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~-----------~~~~~~~~~-~~~~g~~~~l~KP~ 106 (120)
T 1tmy_A 43 YKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSA-----------MGQQAMVIE-AIKAGAKDFIVKPF 106 (120)
T ss_dssp HHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEEC-----------TTCHHHHHH-HHHTTCCEEEESSC
T ss_pred HHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeC-----------CCCHHHHHH-HHHhCcceeEeCCC
Confidence 3344677766642 34543 566767779999998853 123333322 34578888887654
No 399
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=32.30 E-value=1.1e+02 Score=30.44 Aligned_cols=69 Identities=23% Similarity=0.223 Sum_probs=49.0
Q ss_pred CCeEEEEecC--CCCCC-----------HHHHHHHHHcCCCeEEeecCC--------CCHHHHHHHHHHHHHHHHHcCCc
Q 036921 28 AMTKIVGTLG--PKSRS-----------VDVISGCLKAGMSVARFDFSW--------GNTEYHQETLENLKAAVKTTKKL 86 (527)
Q Consensus 28 ~~tkIi~TiG--p~~~~-----------~~~l~~l~~~G~~v~RiN~sh--------g~~e~~~~~i~~ir~~~~~~~~~ 86 (527)
.+++|++-+. |-|.+ .+..++|++.|+++.=+|.-- ...|+..+++.-|+.+.++.+
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~-- 115 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-- 115 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC--
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--
Confidence 4789999885 43322 245688999999999999733 225778888877777766665
Q ss_pred eEEEecCCCCeE
Q 036921 87 CAVMLDTVGPEL 98 (527)
Q Consensus 87 v~i~~Dl~Gpki 98 (527)
+.|.+|+.-|++
T Consensus 116 vpiSIDT~~~~V 127 (297)
T 1tx2_A 116 LPISIDTYKAEV 127 (297)
T ss_dssp SCEEEECSCHHH
T ss_pred ceEEEeCCCHHH
Confidence 556788875554
No 400
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=32.10 E-value=83 Score=32.07 Aligned_cols=60 Identities=10% Similarity=0.191 Sum_probs=39.7
Q ss_pred eEEEEec-CCCCCCHH----HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 30 TKIVGTL-GPKSRSVD----VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 30 tkIi~Ti-Gp~~~~~~----~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
...-+|+ |- ..+++ ..+++.+.|.+.+.+++.+ +.++-.+.++.+|++ .|..+.|++|..
T Consensus 139 v~~y~~~~~~-~~~~e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a---~g~d~~l~vDan 203 (389)
T 3ozy_A 139 VRAYASSIYW-DLTPDQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQR---VGADVEILVDAN 203 (389)
T ss_dssp EEEEEEEECS-SCCHHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred eeeEEecCCC-CCCHHHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHH---cCCCceEEEECC
Confidence 6677777 52 22343 3466778899999999987 566666666666665 454456666644
No 401
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=32.00 E-value=1.4e+02 Score=29.68 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=53.1
Q ss_pred hcccccccEEEecCCCCHH---------------HHHHHHHHH----HHcCCCCCceEEEeecChHhHhhHH----HHHH
Q 036921 215 WGVQNKIDFLSLSYTRHAE---------------DVRQAREYL----SKLGDLSQTQIFAKIENIEGLTHFD----EILQ 271 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~s~~---------------dv~~lr~~l----~~~~~~~~~~IiaKIEt~~av~nld----eI~~ 271 (527)
.+++.|+|+|.+=-|.+-+ +...+...| ..++ ..+.|+.+ .|.+-++ ++..
T Consensus 130 ~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~--P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 130 RVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERK--PDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhC--CCcEEEEe----cCHHhhcccHhHHHh
Confidence 4578999999999886533 323332333 4445 45666654 4555566 7778
Q ss_pred hCCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 272 AADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 272 ~sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
..||++.----.+ -+.+ ++-......-+..++++||||+.
T Consensus 204 ~id~v~~Es~~~~~~~~~~-~~e~~~~~~~l~~~~~~GkpV~~ 245 (309)
T 2aam_A 204 TVSGWAVENLFYLKTIPLE-ENETKSRLEYLIRLNRKGKFILS 245 (309)
T ss_dssp HCSEEEEESSSEETTEECC-HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hcCEEEeeeEEecCCCCCC-HHHHHHHHHHHHHHHHcCCcEEE
Confidence 8899887311100 0111 12222234456677788999997
No 402
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=31.97 E-value=37 Score=33.61 Aligned_cols=64 Identities=17% Similarity=0.116 Sum_probs=45.4
Q ss_pred HHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHh--HhhHHHHHHh-CCEEEEeC
Q 036921 209 KEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEG--LTHFDEILQA-ADGIILSR 280 (527)
Q Consensus 209 ~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~a--v~nldeI~~~-sDgImIaR 280 (527)
.+.+. -+++.|+|+|++.. -++++++++++.+...+ .++++.| --| .+|+.++++. .|+|-+|.
T Consensus 203 leea~-eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~--~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 203 LEDAL-RAVEAGADIVMLDN-LSPEEVKDISRRIKDIN--PNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHH-HHHHTTCSEEEEES-CCHHHHHHHHHHHHHHC--TTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHHH-HHHHcCCCEEEECC-CCHHHHHHHHHHhhccC--CCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 45554 46889999999998 58899999999887643 3444333 233 3567777766 59999975
No 403
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=31.62 E-value=1.8e+02 Score=23.02 Aligned_cols=62 Identities=11% Similarity=0.196 Sum_probs=35.3
Q ss_pred HHHHHhcCCcEEEEE----CCCcHH-HHHHHhh--CCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCC
Q 036921 402 VRAAIKVKASVIICF----TSSGRA-ARLIAKY--RPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADP 474 (527)
Q Consensus 402 v~~a~~~~a~~Ivv~----T~sG~t-A~~is~~--RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~ 474 (527)
.+...+.+.++|++= ..+|.. .+.+-+. .|.+||+.++. ..+.... ...+-.|+..++..+
T Consensus 39 l~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~-----------~~~~~~~-~~~~~~Ga~~~l~KP 106 (122)
T 3gl9_A 39 LEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTA-----------KGGEEDE-SLALSLGARKVMRKP 106 (122)
T ss_dssp HHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEES-----------CCSHHHH-HHHHHTTCSEEEESS
T ss_pred HHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEec-----------CCchHHH-HHHHhcChhhhccCC
Confidence 334455677877663 235544 3444322 37899998853 1233333 334667888888775
Q ss_pred C
Q 036921 475 R 475 (527)
Q Consensus 475 ~ 475 (527)
.
T Consensus 107 ~ 107 (122)
T 3gl9_A 107 F 107 (122)
T ss_dssp C
T ss_pred C
Confidence 5
No 404
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=31.57 E-value=74 Score=32.79 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCCeEEeecCCCC------------------HHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGN------------------TEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~------------------~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+.|+.|.+.|+|++|+-++.+. .++..+.++.+=..+++.| +-+++||-
T Consensus 66 ~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~G--i~vil~l~ 132 (440)
T 1uuq_A 66 KELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRD--MTVVLYFN 132 (440)
T ss_dssp HHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTT--CEEEEECC
T ss_pred HHHHHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence 5688899999999999854221 1445666666666677778 56677764
No 405
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=31.54 E-value=1.4e+02 Score=30.23 Aligned_cols=88 Identities=23% Similarity=0.306 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhC----CEEEE----eCCCCcCCCCchhHHHHHHHHHHH
Q 036921 231 HAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAA----DGIIL----SRGNLGIDLPPEKVFLFQKAALYK 302 (527)
Q Consensus 231 s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~s----DgImI----aRgDLg~e~~~~~v~~~qk~Ii~~ 302 (527)
+.++++.+++. .+.+++.| ++...++...+. |+|.| ||.--+..-.++-++.+.+.+
T Consensus 217 ~~~~i~~lr~~-------~~~PvivK-----~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v--- 281 (368)
T 2nli_A 217 SPRDIEEIAGH-------SGLPVFVK-----GIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV--- 281 (368)
T ss_dssp CHHHHHHHHHH-------SSSCEEEE-----EECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHH-------cCCCEEEE-----cCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh---
Q ss_pred HHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 303 CNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 303 c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
...+|+|. ..+ ..-.|+..++..|||++|+.
T Consensus 282 --~~~ipVia~GGI------------~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 282 --NKRVPIVFDSGV------------RRGEHVAKALASGADVVALG 313 (368)
T ss_dssp --TTSSCEEECSSC------------CSHHHHHHHHHTTCSEEEEC
T ss_pred --CCCCeEEEECCC------------CCHHHHHHHHHcCCCEEEEC
No 406
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=31.34 E-value=3.4e+02 Score=26.55 Aligned_cols=87 Identities=10% Similarity=0.191 Sum_probs=51.5
Q ss_pred CCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHH-HHHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVA-NAVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~-nav~~g~D~imLs~ 348 (527)
.|||++. |--| ..+..++-..+-+..++.++ -..|+|. +. ..+-+|.-+.+ .|-..|+|++|+..
T Consensus 43 v~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---------~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 43 SDGLCIL-ANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTTS---------HYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp CSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEecC---------CchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4899984 2221 23444444444444444442 2479998 65 34455555544 46677999999974
Q ss_pred cccc----CCChHHHHHHHHHHHHHHh
Q 036921 349 ETLR----GLYPVETISIVGKICAEAE 371 (527)
Q Consensus 349 Eta~----G~yP~e~V~~~~~i~~~aE 371 (527)
= .. ..-+-+.++..+.|+..+.
T Consensus 112 P-yy~~~~~~s~~~l~~~f~~va~a~~ 137 (309)
T 3fkr_A 112 P-YHGATFRVPEAQIFEFYARVSDAIA 137 (309)
T ss_dssp S-CBTTTBCCCHHHHHHHHHHHHHHCS
T ss_pred C-CCccCCCCCHHHHHHHHHHHHHhcC
Confidence 2 22 1125778888888887764
No 407
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=31.26 E-value=1.5e+02 Score=28.16 Aligned_cols=47 Identities=19% Similarity=0.170 Sum_probs=31.7
Q ss_pred HHHHHHhCCEEEEeCCC------CcCCC----C--chhHHHHHHHHHHHHHHcCCcEEE
Q 036921 266 FDEILQAADGIILSRGN------LGIDL----P--PEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 266 ldeI~~~sDgImIaRgD------Lg~e~----~--~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
++++++..|||++.-|. .+-+. + -+.-......+++.|.+.+||++-
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLG 113 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFA 113 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEE
Confidence 67778888999998772 11111 0 122334567889999999999875
No 408
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=31.24 E-value=1.7e+02 Score=27.04 Aligned_cols=85 Identities=7% Similarity=-0.008 Sum_probs=50.0
Q ss_pred hhcccccccEEEecCC---------------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-----C
Q 036921 214 SWGVQNKIDFLSLSYT---------------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-----A 273 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV---------------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-----s 273 (527)
+.+.+.|+|+|=+... .+.+++.++++.+.+.| -.+..+.-- .....+.+...++. +
T Consensus 29 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--l~i~~~~~~-~~~~~~~~~~~i~~A~~lGa 105 (262)
T 3p6l_A 29 DKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKG--IKIVGTGVY-VAEKSSDWEKMFKFAKAMDL 105 (262)
T ss_dssp HHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTT--CEEEEEEEE-CCSSTTHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcC--CeEEEEecc-CCccHHHHHHHHHHHHHcCC
Confidence 3668899999988642 46889999999999887 222222211 11223333333333 2
Q ss_pred CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 274 DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 274 DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
+.|.+.+|. +. -+++...|+++|..+.+
T Consensus 106 ~~v~~~~~~-------~~----~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 106 EFITCEPAL-------SD----WDLVEKLSKQYNIKISV 133 (262)
T ss_dssp SEEEECCCG-------GG----HHHHHHHHHHHTCEEEE
T ss_pred CEEEecCCH-------HH----HHHHHHHHHHhCCEEEE
Confidence 566665441 22 25667777777776655
No 409
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=31.13 E-value=3.4e+02 Score=26.15 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=65.2
Q ss_pred HHHHHHHHcCCcEEEecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccchh
Q 036921 298 AALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQD 377 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~~ 377 (527)
-+...|+..|.++.+. .|....-..+...-..|++.+...+. | -++.+...++.++- .. .|-
T Consensus 79 alA~~a~~~G~~~~iv----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~~-~~~ 140 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-GY-ALI 140 (311)
T ss_dssp HHHHHHHHHTCCEEEE----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-CC-EEC
T ss_pred HHHHHHHHcCCCEEEE----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-Cc-Eec
Confidence 5677789999998861 11111122344555569987644322 3 35666666655432 11 111
Q ss_pred hhhhhhhcccCCCCChHHHHHHHHHHHHHhc-----CCcEEEEECCCcHHHHHHHh----hCCCCCEEEEee
Q 036921 378 LYFKKTVKCVGEPMTHLESIASSAVRAAIKV-----KASVIICFTSSGRAARLIAK----YRPTMPVLSVVI 440 (527)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~ia~~av~~a~~~-----~a~~Ivv~T~sG~tA~~is~----~RP~~PIiAv~~ 440 (527)
..|.+ | .....-...+.++..++ +.+.|||.+-+|.++.-+++ ..|...|+++.+
T Consensus 141 ~~~~n-------~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~ 204 (311)
T 1ve5_A 141 HPFDD-------P-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEP 204 (311)
T ss_dssp CSSSS-------H-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCCCC-------c-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 01110 0 01122233344555554 47899999999999776664 479999999854
No 410
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=31.06 E-value=3.8e+02 Score=26.02 Aligned_cols=98 Identities=19% Similarity=0.115 Sum_probs=67.2
Q ss_pred ccccccEEEe-----cCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHh---hHHHHHHh-CCEEEEeCCCCcCCC
Q 036921 217 VQNKIDFLSL-----SYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLT---HFDEILQA-ADGIILSRGNLGIDL 287 (527)
Q Consensus 217 ~~~g~d~I~~-----sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~---nldeI~~~-sDgImIaRgDLg~e~ 287 (527)
.+.|+++|-+ -|=.+.+++.++++. -+++|+.|= .+. .+++.... +|+|++.-.+|.
T Consensus 89 ~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-------v~lPVl~Kd----fi~d~~qi~ea~~~GAD~VlLi~a~L~--- 154 (272)
T 3tsm_A 89 EEGGAACLSVLTDTPSFQGAPEFLTAARQA-------CSLPALRKD----FLFDPYQVYEARSWGADCILIIMASVD--- 154 (272)
T ss_dssp HHTTCSEEEEECCSTTTCCCHHHHHHHHHT-------SSSCEEEES----CCCSTHHHHHHHHTTCSEEEEETTTSC---
T ss_pred HHCCCCEEEEeccccccCCCHHHHHHHHHh-------cCCCEEECC----ccCCHHHHHHHHHcCCCEEEEcccccC---
Confidence 6789999987 355899999988864 346677661 222 24444333 599999877662
Q ss_pred CchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 288 PPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 288 ~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
. .--+.++..|+..|.-+++ ++ +..| +..|...|+|.|-.+
T Consensus 155 -~----~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGin 196 (272)
T 3tsm_A 155 -D----DLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVN 196 (272)
T ss_dssp -H----HHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEE
T ss_pred -H----HHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEEC
Confidence 2 3356788899999999998 76 3444 456677899987654
No 411
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=30.76 E-value=55 Score=27.79 Aligned_cols=41 Identities=12% Similarity=0.241 Sum_probs=30.5
Q ss_pred HHHHHHHH-HHhcCCcEEEEECCC--------cHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRA-AIKVKASVIICFTSS--------GRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~-a~~~~a~~Ivv~T~s--------G~tA~~is~~RP~~PIiAv 438 (527)
.+...++. |.+.++++||+-++. |.++..+.+.- +|||+.+
T Consensus 106 ~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a-~~PVlvV 155 (156)
T 3fg9_A 106 VDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKA-PISVIVV 155 (156)
T ss_dssp HHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHC-SSEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhC-CCCEEEe
Confidence 44555666 788899999988762 67888887764 4999965
No 412
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=30.60 E-value=3.8e+02 Score=25.94 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=66.4
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++++ . |..+.-..+...-..|++.+...+ .| -++.+...++.++ +.. .|
T Consensus 68 alA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~-~~~-~~ 128 (318)
T 2rkb_A 68 AAAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR-DGW-EN 128 (318)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS-TTE-EE
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh-cCC-EE
Confidence 467789999999886 2 111112233444556998777542 23 5566555554432 111 11
Q ss_pred hhhhhhhhcccCCCCCh--HHHHHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHhh-----CCCCCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTH--LESIASSAVRAAIKVK--ASVIICFTSSGRAARLIAKY-----RPTMPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~--~~~ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~~-----RP~~PIiAv~~ 440 (527)
-..| .++ ...-...+.++..+++ .+.||+.+-+|.++.-++++ .|...|+++-+
T Consensus 129 ~~~~----------~n~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~ 191 (318)
T 2rkb_A 129 VPPF----------DHPLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMET 191 (318)
T ss_dssp CCSS----------CSHHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEE
T ss_pred eCCC----------CChhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEec
Confidence 0001 122 2223344566777764 69999999999997776653 38899999854
No 413
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=30.53 E-value=63 Score=32.84 Aligned_cols=61 Identities=11% Similarity=0.097 Sum_probs=41.4
Q ss_pred CeEEEEecCCCCCCHH----HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 29 MTKIVGTLGPKSRSVD----VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 29 ~tkIi~TiGp~~~~~~----~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+....+|+|.. .+++ ..+++.++|.+.+.|++.+.+.+. .+.++.+|++ .|..+.|++|..
T Consensus 152 ~vp~~~~~g~~-~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a---~g~d~~l~vDan 216 (388)
T 2nql_A 152 SFPAYVSGLPE-RTLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQV---LGPQAKIAADMH 216 (388)
T ss_dssp EEEEEEECCCC-SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHH---HCTTSEEEEECC
T ss_pred ceEeeEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHH---hCCCCEEEEECC
Confidence 45666788742 2443 346678899999999998756666 7777777765 344455666653
No 414
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=30.51 E-value=65 Score=32.25 Aligned_cols=53 Identities=17% Similarity=-0.046 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHcCCCeEEeecCCCCH-----HHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 41 RSVDVISGCLKAGMSVARFDFSWGNT-----EYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 41 ~~~~~l~~l~~~G~~v~RiN~shg~~-----e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
...+.++.|-+.|+|++|+-+..... +...+.++.+=+.+.+.| +.+++|+-+
T Consensus 86 ~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G--i~Vild~H~ 143 (359)
T 4hty_A 86 FSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELG--IYTILDWHS 143 (359)
T ss_dssp CSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred cCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCC--CEEEEEcCC
Confidence 45778999999999999998664331 234455555555566677 677888765
No 415
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=30.42 E-value=1e+02 Score=26.42 Aligned_cols=41 Identities=24% Similarity=0.200 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCcEEEEECC---------CcHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTS---------SGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~---------sG~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++ -|.++..+.+. -+|||+.+
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~-a~~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILK-ANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHH-CSSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHh-CCCCEEEe
Confidence 3455667788899999998774 37788888775 45999965
No 416
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=30.36 E-value=3.8e+02 Score=25.87 Aligned_cols=93 Identities=9% Similarity=0.032 Sum_probs=59.0
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHHHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYLSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgDL 283 (527)
++.++.|+|+|++ ++--|.++=.++-+...+.- .. ||+-+= |.++++.....-+. +||+|+.+-..
T Consensus 27 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~--~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 102 (288)
T 2nuw_A 27 KNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVT--HK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYY 102 (288)
T ss_dssp HHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTC--SC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh--CC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 4778999999987 35556666666666554432 23 888873 36666655555443 49999976554
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.--.+.+.+...-+.|. .+.+.|+++ .
T Consensus 103 ~~~~s~~~l~~~f~~va---~a~~lPiilYn 130 (288)
T 2nuw_A 103 FPRLPEKFLAKYYEEIA---RISSHSLYIYN 130 (288)
T ss_dssp SCSCCHHHHHHHHHHHH---HHCCSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHH---HhcCCCEEEEE
Confidence 32124456555555554 456899998 5
No 417
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=30.32 E-value=1.4e+02 Score=29.81 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=46.9
Q ss_pred CCceEEEeecCh------HhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhhhhc
Q 036921 249 SQTQIFAKIENI------EGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTD 321 (527)
Q Consensus 249 ~~~~IiaKIEt~------~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeSM~~ 321 (527)
.+..|+|+.|.. ++++......++ +|+|++- ... . -..+-+.|++..+|++. +|++. -.
T Consensus 158 ~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e-------~~~-~----~~~~~~i~~~~~~P~~~-n~~~~-g~ 223 (305)
T 3ih1_A 158 PSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE-------ALQ-S----EEEFRLFNSKVNAPLLA-NMTEF-GK 223 (305)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET-------TCC-S----HHHHHHHHHHSCSCBEE-ECCTT-SS
T ss_pred CCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc-------CCC-C----HHHHHHHHHHcCCCEEE-eecCC-CC
Confidence 457888888876 455555555555 6999983 211 1 13445566677889874 34332 12
Q ss_pred CCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 322 NLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 322 ~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.|.+|.+|..+ .|+.-+...
T Consensus 224 tp~~~~~eL~~------lGv~~v~~~ 243 (305)
T 3ih1_A 224 TPYYSAEEFAN------MGFQMVIYP 243 (305)
T ss_dssp SCCCCHHHHHH------TTCSEEEEC
T ss_pred CCCCCHHHHHH------cCCCEEEEc
Confidence 35666665543 477777654
No 418
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=30.30 E-value=83 Score=25.98 Aligned_cols=41 Identities=10% Similarity=0.100 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhcCCcEEEEECCC------cHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTSS------GRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~s------G~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++. |.++..+.+.- +|||+.+
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~-~~pVlvv 136 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTI-KIDMLVV 136 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTC-CSEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcC-CCCEEEe
Confidence 44555677889999999988762 34566666554 5999976
No 419
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=30.30 E-value=3e+02 Score=27.39 Aligned_cols=153 Identities=15% Similarity=0.077 Sum_probs=0.0
Q ss_pred eCCCCcCCCCch---hHHHHHHHHHHHHHHcCCcEEE-ecchh----------------hhhc-------CCCCChHhhh
Q 036921 279 SRGNLGIDLPPE---KVFLFQKAALYKCNMAGKPAVV-TRVVD----------------SMTD-------NLRPTRAEAT 331 (527)
Q Consensus 279 aRgDLg~e~~~~---~v~~~qk~Ii~~c~~~gKpvi~-Tq~Le----------------SM~~-------~p~PtraEv~ 331 (527)
+||-||+..++. +-....++++.+...-|.-.++ |.=+= ||-. .+.-.+--..
T Consensus 53 arg~lgv~~~p~~m~~~~~~l~~~~~~~~~~Gvdavl~~~gi~~d~~Li~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~ 132 (307)
T 3fok_A 53 ARGALAVGDNETAMANRYELLERMAIALSRPGVDGVLGTPDIIDDLAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGY 132 (307)
T ss_dssp GGTCCCSSSSSSSSSCHHHHHHHHHHHHHSTTCCEEEECHHHHHHHHHTTCCTTCEEEEECCCCSCTTCTTTTSCCCCSC
T ss_pred ccccCccCCCccccccHHHHHHHHHHHHhccCCCEEEECcchhhcccceEEecCcccccccCccccccCCCCcccccccc
Q ss_pred hHHHHHHhCCcEEEeCCccccC-CChHHHHHHHHHHHHHHhhc----cchhhhhhhhhcccCCCCChHHHHHHHHHHHHH
Q 036921 332 DVANAVLDGSDAILLGAETLRG-LYPVETISIVGKICAEAEKV----FNQDLYFKKTVKCVGEPMTHLESIASSAVRAAI 406 (527)
Q Consensus 332 Dv~nav~~g~D~imLs~Eta~G-~yP~e~V~~~~~i~~~aE~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~av~~a~ 406 (527)
++-.++..|+|++-+.--.-.| .|-.+.++.+.+++.+++++ +-....|...-.......++ .....++++|.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp--~~Va~aaRiAa 210 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLST--DAVIQSVAIAA 210 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSH--HHHHHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCH--HHHHHHHHHHH
Q ss_pred hcCCc----EEEEECCCcHHHHHHHhhCCCCCEE
Q 036921 407 KVKAS----VIICFTSSGRAARLIAKYRPTMPVL 436 (527)
Q Consensus 407 ~~~a~----~Ivv~T~sG~tA~~is~~RP~~PIi 436 (527)
+++|+ .+=+.-. ...++.++..+ +||+
T Consensus 211 ELGADs~~tivK~~y~-e~f~~Vv~a~~--vPVV 241 (307)
T 3fok_A 211 GLGNDSSYTWMKLPVV-EEMERVMESTT--MPTL 241 (307)
T ss_dssp TCSSCCSSEEEEEECC-TTHHHHGGGCS--SCEE
T ss_pred HhCCCcCCCEEEeCCc-HHHHHHHHhCC--CCEE
No 420
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=30.30 E-value=77 Score=31.43 Aligned_cols=68 Identities=18% Similarity=0.165 Sum_probs=46.9
Q ss_pred CCeEEEEecC--CCCCC-----------HHHHHHHHHcCCCeEEeec-CCCC-------HHHHHHHHHHHHHHHHHcCCc
Q 036921 28 AMTKIVGTLG--PKSRS-----------VDVISGCLKAGMSVARFDF-SWGN-------TEYHQETLENLKAAVKTTKKL 86 (527)
Q Consensus 28 ~~tkIi~TiG--p~~~~-----------~~~l~~l~~~G~~v~RiN~-shg~-------~e~~~~~i~~ir~~~~~~~~~ 86 (527)
.+|+|++-|. |-|-+ .+..++|++.|+++.=+|. |-.. .||+.+++.-|+...++ .
T Consensus 21 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~---~ 97 (294)
T 2y5s_A 21 ERPLVMGILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL---N 97 (294)
T ss_dssp SSCEEEEEEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG---C
T ss_pred CCceEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC---C
Confidence 4588998774 53321 2456789999999999999 4322 57788888888877554 3
Q ss_pred eEEEecCCCCeE
Q 036921 87 CAVMLDTVGPEL 98 (527)
Q Consensus 87 v~i~~Dl~Gpki 98 (527)
+.|.+|+.=|++
T Consensus 98 vpiSIDT~~~~V 109 (294)
T 2y5s_A 98 VPLSIDTYKPAV 109 (294)
T ss_dssp SCEEEECCCHHH
T ss_pred CeEEEECCCHHH
Confidence 667888875543
No 421
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=30.12 E-value=63 Score=31.89 Aligned_cols=63 Identities=17% Similarity=0.158 Sum_probs=43.5
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEe
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILS 279 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIa 279 (527)
+.+.+. -+++.|+|+|++..+ ++++++++.+.+. .++++.| +=. --.+|+.++++. .|+|-++
T Consensus 205 t~eea~-eA~~aGaD~I~ld~~-~~~~~k~av~~v~-----~~ipi~A-sGG-It~eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 205 SLEELE-EALEAGADLILLDNF-PLEALREAVRRVG-----GRVPLEA-SGN-MTLERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp SHHHHH-HHHHHTCSEEEEESC-CHHHHHHHHHHHT-----TSSCEEE-ESS-CCHHHHHHHHHHTCSEEECT
T ss_pred CHHHHH-HHHHcCCCEEEECCC-CHHHHHHHHHHhC-----CCCeEEE-EcC-CCHHHHHHHHHcCCCEEEEc
Confidence 355565 467899999999986 7788887777663 2455544 100 015788898888 6999885
No 422
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=30.11 E-value=2.3e+02 Score=27.41 Aligned_cols=116 Identities=9% Similarity=0.046 Sum_probs=68.1
Q ss_pred HHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHHHHHHHHhhccch
Q 036921 298 AALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQ 376 (527)
Q Consensus 298 ~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~~i~~~aE~~~~~ 376 (527)
-+...|+..|.++++ - |..+....+...-..|++.+...++. . .-++++...++.++- ..+ +
T Consensus 79 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~-~~~-~ 141 (303)
T 1o58_A 79 AIAMIGAKRGHRVILTM-----------PETMSVERRKVLKMLGAELVLTPGEL---G-MKGAVEKALEISRET-GAH-M 141 (303)
T ss_dssp HHHHHHHHHTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHH-CCB-C
T ss_pred HHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHhc-CeE-e
Confidence 567788999999886 2 11112234445555699987755321 1 245666555554432 111 1
Q ss_pred hhhhhhhhcccCCCCChHHH---HHHHHHHHHHhcC--CcEEEEECCCcHHHHHHHhh----CCC-CCEEEEee
Q 036921 377 DLYFKKTVKCVGEPMTHLES---IASSAVRAAIKVK--ASVIICFTSSGRAARLIAKY----RPT-MPVLSVVI 440 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~---ia~~av~~a~~~~--a~~Ivv~T~sG~tA~~is~~----RP~-~PIiAv~~ 440 (527)
...| .++... ....+.++.++++ .+.|||.+-+|.++.-++++ .|. ..|+++.+
T Consensus 142 ~~~~----------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~ 205 (303)
T 1o58_A 142 LNQF----------ENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEP 205 (303)
T ss_dssp CCTT----------TCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEE
T ss_pred CCCC----------CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEec
Confidence 0001 122111 1233567777765 69999999999997776653 588 89999854
No 423
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=29.97 E-value=1.4e+02 Score=37.44 Aligned_cols=118 Identities=13% Similarity=0.079 Sum_probs=71.2
Q ss_pred HHHHhhcccccccE--EEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecCh-HhHhhHHHHHHh-CCEEE---EeCCC
Q 036921 210 EVISSWGVQNKIDF--LSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENI-EGLTHFDEILQA-ADGII---LSRGN 282 (527)
Q Consensus 210 ~di~~~~~~~g~d~--I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~-~av~nldeI~~~-sDgIm---IaRgD 282 (527)
+.+. .+++.|++. |.+++=.- ..+++.+++.+.| ++++..+-+. +|.+....+.+. +|+|+ +--+|
T Consensus 657 ~~~~-~~~~~gv~i~gv~~~~G~p--~~e~~~~~l~~~g----i~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~e 729 (2060)
T 2uva_G 657 PLLG-RLRADGVPIEGLTIGAGVP--SIEVANEYIQTLG----IRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGR 729 (2060)
T ss_dssp HHHH-HHHTTTCCEEEEEEESSCC--CHHHHHHHHHHSC----CSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTT
T ss_pred HHHH-HHHHcCCCcceEeecCCCC--CHHHHHHHHHHcC----CeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEccc
Confidence 4453 568899998 77776431 2233455666655 5666665443 344443444554 59888 54455
Q ss_pred CcCCCCchhHHHHHHHHHHHHHH-cCCcEEE-ecchhhhhcCCCCChHhhhhHHHHH-----------HhCCcEEEe
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNM-AGKPAVV-TRVVDSMTDNLRPTRAEATDVANAV-----------LDGSDAILL 346 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~-~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav-----------~~g~D~imL 346 (527)
=|-+.+.+++..-.-.++...++ .+.|+|. ..+ +.-.|++.++ ..|||+|++
T Consensus 730 aGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI------------~~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 730 GGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGF------------GGSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSC------------CSHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCC------------CCHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 55565543322222344444444 4799998 664 3456888899 899999998
No 424
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=29.93 E-value=67 Score=27.92 Aligned_cols=41 Identities=12% Similarity=0.267 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcCCcEEEEECCC---------cHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTSS---------GRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~s---------G~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.++++||+-++. |.++..+.+.-| |||+.+
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv 161 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTI 161 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEE
Confidence 34555677888899999888752 556777777655 999976
No 425
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=29.79 E-value=97 Score=31.06 Aligned_cols=46 Identities=11% Similarity=0.195 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
+..+++.+.|.+.+.+++.| +.+.-.+.++.+|++ .|..+.|++|.
T Consensus 147 ~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a---~g~~~~l~vDa 192 (369)
T 2p8b_A 147 EEAASMIQKGYQSFKMKVGT-NVKEDVKRIEAVRER---VGNDIAIRVDV 192 (369)
T ss_dssp HHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHH---HCTTSEEEEEC
T ss_pred HHHHHHHHcCcCEEEEEeCC-CHHHHHHHHHHHHHH---hCCCCeEEEEC
Confidence 34566788999999999987 466666667777765 44344555554
No 426
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=29.74 E-value=32 Score=28.95 Aligned_cols=66 Identities=15% Similarity=0.062 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCc
Q 036921 230 RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKP 309 (527)
Q Consensus 230 ~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKp 309 (527)
.|.==+..++++..+.| -++.+.| .+...+++.+.-.|.|++|| .+.+..+++-+.|...|+|
T Consensus 18 STsllv~km~~~a~~~g--i~v~i~a-----~~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ip 80 (108)
T 3nbm_A 18 TSAQLANAINEGANLTE--VRVIANS-----GAYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQ 80 (108)
T ss_dssp HHHHHHHHHHHHHHHHT--CSEEEEE-----EETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCE
T ss_pred CHHHHHHHHHHHHHHCC--CceEEEE-----cchHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCc
Confidence 44445677778887777 5666766 23334666777789999983 5666677888889899999
Q ss_pred EEE
Q 036921 310 AVV 312 (527)
Q Consensus 310 vi~ 312 (527)
|.+
T Consensus 81 V~v 83 (108)
T 3nbm_A 81 IVA 83 (108)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 427
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=29.59 E-value=2.2e+02 Score=22.80 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=35.6
Q ss_pred HHHHhcCCcEEEEEC---------CCcH-HHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEec
Q 036921 403 RAAIKVKASVIICFT---------SSGR-AARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLA 472 (527)
Q Consensus 403 ~~a~~~~a~~Ivv~T---------~sG~-tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~ 472 (527)
+...+...++|++-. .+|. ..+.+.+..|.+||+.++.. .+..... -.+-.|+.-++.
T Consensus 41 ~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~-----------~~~~~~~-~~~~~g~~~~l~ 108 (140)
T 2qr3_A 41 TVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAY-----------ADIDLAV-RGIKEGASDFVV 108 (140)
T ss_dssp HHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEG-----------GGHHHHH-HHHHTTCCEEEE
T ss_pred HHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECC-----------CCHHHHH-HHHHcCchheee
Confidence 344456678777642 2343 35566677899999998531 1222222 234568888777
Q ss_pred CCC
Q 036921 473 DPR 475 (527)
Q Consensus 473 ~~~ 475 (527)
.+.
T Consensus 109 kp~ 111 (140)
T 2qr3_A 109 KPW 111 (140)
T ss_dssp ESC
T ss_pred CCC
Confidence 644
No 428
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=29.50 E-value=4.1e+02 Score=26.01 Aligned_cols=128 Identities=14% Similarity=0.115 Sum_probs=0.0
Q ss_pred CCHhhHHHHHhhcccccccEEEecC-------------CCCHHHHHHHHHHHHHcCCCCCceEEEeecC-------hHhH
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSY-------------TRHAEDVRQAREYLSKLGDLSQTQIFAKIEN-------IEGL 263 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sf-------------V~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt-------~~av 263 (527)
+|-+|..-.+ .+-+.|+|.|.+.. -=|.+++...-+.+.+.- +...|++=.+- .+++
T Consensus 39 ~tayDa~sA~-l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~--~~~~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 39 LTAYDYSTAR-IFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGA--PHALVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp EECCSHHHHH-HHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHC--TTSEEEEECCTTSSTTCHHHHH
T ss_pred EeCcCHHHHH-HHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcC--CCCeEEEECCCCcccCCHHHHH
Q ss_pred hhHHHHHHhC--CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEE-------E-ecchhhhhcCCCCChHhh--h
Q 036921 264 THFDEILQAA--DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAV-------V-TRVVDSMTDNLRPTRAEA--T 331 (527)
Q Consensus 264 ~nldeI~~~s--DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi-------~-Tq~LeSM~~~p~PtraEv--~ 331 (527)
+|.-.+++.+ +||-+--| ..+...|+++.++|.||+ - .+.+.......+..+++- .
T Consensus 116 ~na~rl~~eaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~ 183 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGG------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIA 183 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBS------------GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEECCc------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHH
Q ss_pred hHHHHHHhCCcEEEe
Q 036921 332 DVANAVLDGSDAILL 346 (527)
Q Consensus 332 Dv~nav~~g~D~imL 346 (527)
|.......|+|+++|
T Consensus 184 rA~a~~eAGA~~ivl 198 (281)
T 1oy0_A 184 DAIAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCcEEEE
No 429
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=29.23 E-value=1.4e+02 Score=28.08 Aligned_cols=95 Identities=8% Similarity=-0.208 Sum_probs=54.1
Q ss_pred hhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee------cChHhHhhHHHHHHhC-----CEEEEeC--
Q 036921 214 SWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI------ENIEGLTHFDEILQAA-----DGIILSR-- 280 (527)
Q Consensus 214 ~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI------Et~~av~nldeI~~~s-----DgImIaR-- 280 (527)
+.+.+.|+|+|=+..-- + ++.++++.+.+.| -.+..+.-- ...++++.+.+.++.+ +.|.+..
T Consensus 38 ~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~g--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~ 113 (301)
T 3cny_A 38 SDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRN--LEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQT 113 (301)
T ss_dssp HHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTT--CEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred HHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCC--CeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 35678999999876432 3 7889999999877 222222100 1123455555555543 5666543
Q ss_pred ----CCCcCCC----------CchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 281 ----GNLGIDL----------PPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 281 ----gDLg~e~----------~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
|...... .++.+...-+++...|.++|..+.+
T Consensus 114 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 114 YTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp TCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3321111 1234555566777888888877665
No 430
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=29.20 E-value=2.6e+02 Score=25.88 Aligned_cols=125 Identities=21% Similarity=0.288 Sum_probs=82.8
Q ss_pred hhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhH----HHHHH--hCCEEEEeC
Q 036921 207 KDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHF----DEILQ--AADGIILSR 280 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nl----deI~~--~sDgImIaR 280 (527)
+|.++++ .+++..+++|++.+. +-..+.++.+.+.++| + .++.-++..+|+.+= +=+.. -+|||+=.
T Consensus 17 r~~~~l~-~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~--K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsT- 89 (192)
T 3kts_A 17 HNQKDME-KILELDLTYMVMLET-HVAQLKALVKYAQAGG--K--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIIST- 89 (192)
T ss_dssp SSSHHHH-HHTTSSCCEEEECSE-ETTTHHHHHHHHHHTT--C--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEES-
T ss_pred cCHHHHH-HHHcCCCCEEEEecC-cHHHHHHHHHHHHHcC--C--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeC-
Confidence 5667776 568888999999986 5577888888888876 3 555688888877541 11222 25888853
Q ss_pred CCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHH
Q 036921 281 GNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVET 359 (527)
Q Consensus 281 gDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~ 359 (527)
+-.++..+++.|..+|- -=+++|+.- -+-+...-....|++ |---|-.|
T Consensus 90 ---------------k~~~i~~Ak~~gL~tIqR~FliDS~al--------~~~~~~i~~~~PD~i----EiLPGi~p--- 139 (192)
T 3kts_A 90 ---------------RGNAIMKAKQHKMLAIQRLFMIDSSAY--------NKGVALIQKVQPDCI----ELLPGIIP--- 139 (192)
T ss_dssp ---------------CHHHHHHHHHTTCEEEEEEECCSHHHH--------HHHHHHHHHHCCSEE----EEECTTCH---
T ss_pred ---------------cHHHHHHHHHCCCeEEEEEEEEEcchH--------HHHHHHHhhcCCCEE----EECCchhH---
Confidence 45788999999999998 667777631 122233333467877 44456555
Q ss_pred HHHHHHHHHH
Q 036921 360 ISIVGKICAE 369 (527)
Q Consensus 360 V~~~~~i~~~ 369 (527)
+++.+++++
T Consensus 140 -~iI~~i~~~ 148 (192)
T 3kts_A 140 -EQVQKMTQK 148 (192)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHh
Confidence 455555544
No 431
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=29.09 E-value=42 Score=27.87 Aligned_cols=41 Identities=5% Similarity=-0.056 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCcEEEEECCCcHHHHHHHhhCCCCCEEEE
Q 036921 397 IASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 438 (527)
Q Consensus 397 ia~~av~~a~~~~a~~Ivv~T~sG~tA~~is~~RP~~PIiAv 438 (527)
.+...++.|.+.+++.||+-++.-.++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 44455677888999988877664356777766655 999954
No 432
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=28.89 E-value=46 Score=33.31 Aligned_cols=47 Identities=11% Similarity=0.165 Sum_probs=35.7
Q ss_pred EEecCCCCCCHHHHHHHHHcC--CCeEEeecCCCCHHHHHHHHHHHHHH
Q 036921 33 VGTLGPKSRSVDVISGCLKAG--MSVARFDFSWGNTEYHQETLENLKAA 79 (527)
Q Consensus 33 i~TiGp~~~~~~~l~~l~~~G--~~v~RiN~shg~~e~~~~~i~~ir~~ 79 (527)
.+-+|...+..+..+.++++| ++..-+|++||......+.|+.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 333565444567788899999 89999999999877777777777764
No 433
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=28.89 E-value=45 Score=33.71 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCCeEEeecCCCC--HHHHHHHHHHHHHHHHHcCCceEEEecCCCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGN--TEYHQETLENLKAAVKTTKKLCAVMLDTVGP 96 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~--~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 96 (527)
+.|+.|.+.|+|++|+-++-+. .+...+.++.+=+.+.+.| +.+++|+-+.
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~G--iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNK--MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT--CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEeccC
Confidence 5799999999999999886432 1123344444445555566 6778888754
No 434
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=28.87 E-value=4.1e+02 Score=26.20 Aligned_cols=128 Identities=13% Similarity=0.159 Sum_probs=0.0
Q ss_pred CCHhhHHHHHh-------hcccccccEEEecCC-------------------------CCHHHHHHHHHHHHHcCCCCCc
Q 036921 204 LSDKDKEVISS-------WGVQNKIDFLSLSYT-------------------------RHAEDVRQAREYLSKLGDLSQT 251 (527)
Q Consensus 204 lt~~D~~di~~-------~~~~~g~d~I~~sfV-------------------------~s~~dv~~lr~~l~~~~~~~~~ 251 (527)
+|..|++.+.+ .+.+.|+|+|=+-.- +..+-+.++.+.+.+. -+.
T Consensus 134 mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~---v~~ 210 (338)
T 1z41_A 134 MSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV---WDG 210 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH---CCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH---cCC
Q ss_pred eEEEee---------cChHhHhhHHHHHHhC--CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHc-CCcEEE-ecchhh
Q 036921 252 QIFAKI---------ENIEGLTHFDEILQAA--DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMA-GKPAVV-TRVVDS 318 (527)
Q Consensus 252 ~IiaKI---------Et~~av~nldeI~~~s--DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~-gKpvi~-Tq~LeS 318 (527)
.|..|| -+.+-...+-..++.. |.|-+.-|... +-....-+..+...++..+++ ++|++. ..+-
T Consensus 211 pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~-~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~-- 287 (338)
T 1z41_A 211 PLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALV-HADINVFPGYQVSFAEKIREQADMATGAVGMIT-- 287 (338)
T ss_dssp CEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSS-CCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCC--
T ss_pred cEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccc-cCCCCCCccchHHHHHHHHHHCCCCEEEECCCC--
Q ss_pred hhcCCCCChHhhhhHHHHHHhC-CcEEEeC
Q 036921 319 MTDNLRPTRAEATDVANAVLDG-SDAILLG 347 (527)
Q Consensus 319 M~~~p~PtraEv~Dv~nav~~g-~D~imLs 347 (527)
...++..++..| +|+|++.
T Consensus 288 ----------s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 288 ----------DGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ----------SHHHHHHHHHTTSCSEEEEC
T ss_pred ----------CHHHHHHHHHcCCceEEeec
No 435
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=28.74 E-value=1.2e+02 Score=28.94 Aligned_cols=44 Identities=14% Similarity=0.089 Sum_probs=37.4
Q ss_pred HHHHHHHHHcCCCeEEeecCC---------CCHHHHHHHHHHHHHHHHHcCCc
Q 036921 43 VDVISGCLKAGMSVARFDFSW---------GNTEYHQETLENLKAAVKTTKKL 86 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~sh---------g~~e~~~~~i~~ir~~~~~~~~~ 86 (527)
.+.+++++++|++++-|---+ .+.++..+....+++.++.++.+
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~ 98 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGAL 98 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCE
Confidence 588999999999999998777 45788888899999999888743
No 436
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=28.74 E-value=1.1e+02 Score=31.34 Aligned_cols=95 Identities=22% Similarity=0.243 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEe-CCCCcCCCCchhHHHHHHHHHHHHHHcCC
Q 036921 231 HAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILS-RGNLGIDLPPEKVFLFQKAALYKCNMAGK 308 (527)
Q Consensus 231 s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~c~~~gK 308 (527)
+.++++++++. .+.+|+.|.= ...+......+. +|+|.|. +|-=....+...+ .+-.++.++.. -..
T Consensus 240 ~~~~i~~lr~~-------~~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~-~~l~~v~~av~-~~i 308 (392)
T 2nzl_A 240 SWEDIKWLRRL-------TSLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPATI-DVLPEIVEAVE-GKV 308 (392)
T ss_dssp CHHHHHHHC---------CCSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH-HHHHHHHHHHT-TSS
T ss_pred HHHHHHHHHHh-------hCCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH-HHHHHHHHHcC-CCC
Confidence 45566666543 2357888731 123333333333 5999993 1100012222222 11122222211 258
Q ss_pred cEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 309 PAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 309 pvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
|+|. ..+- --.|+..++..|||++|+..
T Consensus 309 pVia~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 309 EVFLDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EEEEECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 9998 6642 34788999999999999974
No 437
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.63 E-value=1.7e+02 Score=28.51 Aligned_cols=94 Identities=12% Similarity=0.245 Sum_probs=58.9
Q ss_pred hhcccccccEEEe------cCCCCHHHHHHHHHHH-HHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSL------SYTRHAEDVRQAREYL-SKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~------sfV~s~~dv~~lr~~l-~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++ ++.-|.++=.++-+.. +..+ .+++||+-+= |.++++.....-+. +||+|+.+-.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (291)
T 3a5f_A 29 EWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN--KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPY 106 (291)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4778999999887 3445655555554443 3444 5788999884 36666665555443 5999987655
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..- .+.+.+...-+.| |.+.+.|+++ .
T Consensus 107 y~~-~s~~~l~~~f~~i---a~a~~lPiilYn 134 (291)
T 3a5f_A 107 YNK-TTQKGLVKHFKAV---SDAVSTPIIIYN 134 (291)
T ss_dssp SSC-CCHHHHHHHC-CT---GGGCCSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHH---HHhcCCCEEEEe
Confidence 432 2444555444444 4456899998 5
No 438
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=28.58 E-value=83 Score=32.16 Aligned_cols=48 Identities=10% Similarity=0.160 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 43 VDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+..+++.+.|.+.+.+++.+ +.++-.+.++.+|++ .|..+.|++|..
T Consensus 160 ~~~a~~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a---~g~~~~l~vDaN 207 (392)
T 3ddm_A 160 EDVVARKAAEGYRAFKLKVGF-DDARDVRNALHVREL---LGAATPLMADAN 207 (392)
T ss_dssp HHHHHHHHHHTCCCEEEECSS-CHHHHHHHHHHHHHH---HCSSSCEEEECT
T ss_pred HHHHHHHHHcCCCEEEEecCC-CHHHHHHHHHHHHHh---cCCCceEEEeCC
Confidence 467778889999999999987 566555666666654 555556666654
No 439
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.57 E-value=2.3e+02 Score=22.76 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=38.1
Q ss_pred HHHHHHhcCCcEEEEEC----CCcHH-HHHHHh--hCCCCCEEEEeeccccccccccccCcHHH-HHh-hccccccEEEe
Q 036921 401 AVRAAIKVKASVIICFT----SSGRA-ARLIAK--YRPTMPVLSVVIPRLKTNQLKWSFSGAFE-ARQ-SLIVRGLFPML 471 (527)
Q Consensus 401 av~~a~~~~a~~Ivv~T----~sG~t-A~~is~--~RP~~PIiAv~~~~~~~~~~~~~t~~~~~-aR~-L~L~~GV~P~l 471 (527)
|.+...+...++|++-. .+|.. .+.+.+ ..|.+||+.++ ..... ... ..+..|+.-++
T Consensus 42 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-------------~~~~~~~~~~~~~~~g~~~~l 108 (140)
T 3grc_A 42 ALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVS-------------ANAREGELEFNSQPLAVSTWL 108 (140)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEEC-------------TTHHHHHHHHCCTTTCCCEEE
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEe-------------cCCChHHHHHHhhhcCCCEEE
Confidence 44445566788777743 34543 455555 56899999883 23222 222 45677999888
Q ss_pred cCCC
Q 036921 472 ADPR 475 (527)
Q Consensus 472 ~~~~ 475 (527)
..+.
T Consensus 109 ~kP~ 112 (140)
T 3grc_A 109 EKPI 112 (140)
T ss_dssp CSSC
T ss_pred eCCC
Confidence 7654
No 440
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=28.49 E-value=3.4e+02 Score=27.15 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=68.3
Q ss_pred CCCHhhHHHHHh-------hcccccccEEEec---------C----C--CC----------HHHHHHHHHHHHHc-CCCC
Q 036921 203 TLSDKDKEVISS-------WGVQNKIDFLSLS---------Y----T--RH----------AEDVRQAREYLSKL-GDLS 249 (527)
Q Consensus 203 ~lt~~D~~di~~-------~~~~~g~d~I~~s---------f----V--~s----------~~dv~~lr~~l~~~-~~~~ 249 (527)
.||..|++.+.+ .+.+.|+|+|=+- | . |+ ..-+.++.+.+.+. | .
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg--~ 209 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWP--E 209 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSC--T
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCC--c
Confidence 588888877652 3567899998776 2 2 22 12233444444443 4 5
Q ss_pred CceEEEeecChH------hHhhHHHHHH----hCCEEEEeCCCCcCC-CCchhHHHHHHHHHHHHH-HcCCcEEE-ecch
Q 036921 250 QTQIFAKIENIE------GLTHFDEILQ----AADGIILSRGNLGID-LPPEKVFLFQKAALYKCN-MAGKPAVV-TRVV 316 (527)
Q Consensus 250 ~~~IiaKIEt~~------av~nldeI~~----~sDgImIaRgDLg~e-~~~~~v~~~qk~Ii~~c~-~~gKpvi~-Tq~L 316 (527)
+..|..||--.+ .+++.-++++ ..|.|-+.-|...-. ++.. +..+-..++..+ ..+.|+|. ..+
T Consensus 210 d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi- 286 (343)
T 3kru_A 210 NKPIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLY--PGYQVKYAETIKKRCNIKTSAVGLI- 286 (343)
T ss_dssp TSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCEEEEESSC-
T ss_pred cCCeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeeccc--CceeehHHHHHHHhcCcccceeeee-
Confidence 678888884311 1233333333 268888854443211 1100 111222333333 34899988 542
Q ss_pred hhhhcCCCCChHhhhhHHHHHHhC-CcEEEeC
Q 036921 317 DSMTDNLRPTRAEATDVANAVLDG-SDAILLG 347 (527)
Q Consensus 317 eSM~~~p~PtraEv~Dv~nav~~g-~D~imLs 347 (527)
-|.. +...++..| +|+|++.
T Consensus 287 --------~t~e---~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 --------TTQE---LAEEILSNERADLVALG 307 (343)
T ss_dssp --------CCHH---HHHHHHHTTSCSEEEES
T ss_pred --------eHHH---HHHHHHhchhhHHHHHH
Confidence 1222 335567777 9999997
No 441
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=28.46 E-value=3.8e+02 Score=25.33 Aligned_cols=130 Identities=14% Similarity=0.064 Sum_probs=74.3
Q ss_pred HHhhcccccccEEEecCC----CCHHHHHHHHHHHHHcCCCCCceEEEee--------c------ChHhHhhHHHHHHhC
Q 036921 212 ISSWGVQNKIDFLSLSYT----RHAEDVRQAREYLSKLGDLSQTQIFAKI--------E------NIEGLTHFDEILQAA 273 (527)
Q Consensus 212 i~~~~~~~g~d~I~~sfV----~s~~dv~~lr~~l~~~~~~~~~~IiaKI--------E------t~~av~nldeI~~~s 273 (527)
+. ++.+.|+|+|=+..- ...+++.++++.+.+.| +.+.+-. - ..++++.+...++.+
T Consensus 42 l~-~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~g----l~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 116 (309)
T 2hk0_A 42 IE-KVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNG----IILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNV 116 (309)
T ss_dssp HH-HHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTT----CEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcC----CeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 54 667899999887643 22378999999998876 4444421 1 123455666666553
Q ss_pred -----CEEEEeC----CCCcCCC-C----chhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH
Q 036921 274 -----DGIILSR----GNLGIDL-P----PEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL 338 (527)
Q Consensus 274 -----DgImIaR----gDLg~e~-~----~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~ 338 (527)
+.|.+.. |.+.-+. . ++.+...-+++...|.++|..+.+ +. .....+...|..++.++...+
T Consensus 117 ~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~--~~~~~~~~~~~~~~~~l~~~v- 193 (309)
T 2hk0_A 117 AKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVL--NRFENHVLNTAAEGVAFVKDV- 193 (309)
T ss_dssp HHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC--CTTTCSSCCSHHHHHHHHHHH-
T ss_pred HHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeec--ccccccccCCHHHHHHHHHHc-
Confidence 4555322 3321111 2 234555567888888889988776 32 111234456777777777766
Q ss_pred hCCcEEEeCCcc
Q 036921 339 DGSDAILLGAET 350 (527)
Q Consensus 339 ~g~D~imLs~Et 350 (527)
+.+.+-+.-+|
T Consensus 194 -~~~~vg~~~D~ 204 (309)
T 2hk0_A 194 -GKNNVKVMLDT 204 (309)
T ss_dssp -TCTTEEEEEEH
T ss_pred -CCCCeEEEEeh
Confidence 33434443343
No 442
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=28.35 E-value=4.1e+02 Score=25.66 Aligned_cols=93 Identities=10% Similarity=0.041 Sum_probs=57.8
Q ss_pred hhcccccccEEEec------CCCCHHHHHHHHHHHHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 214 SWGVQNKIDFLSLS------YTRHAEDVRQAREYLSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 214 ~~~~~~g~d~I~~s------fV~s~~dv~~lr~~l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgDL 283 (527)
+|.++.|+|+|++. +--|.++=.++-+...+.- .. ||+-+= |.++++.....-+. +||+|+.+-..
T Consensus 27 ~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~--~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 102 (293)
T 1w3i_A 27 ENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVT--NK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYY 102 (293)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTC--SC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHc--CC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 47789999998873 4556666666666555443 23 888873 35555554444333 49999876554
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.-..+.+.+...-+.|. .+.+.|+++ .
T Consensus 103 ~~~~s~~~l~~~f~~va---~a~~lPiilYn 130 (293)
T 1w3i_A 103 YPRMSEKHLVKYFKTLC---EVSPHPVYLYN 130 (293)
T ss_dssp CSSCCHHHHHHHHHHHH---HHCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHH---hhCCCCEEEEE
Confidence 32134456665556554 455899998 5
No 443
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=28.31 E-value=1.9e+02 Score=29.31 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=39.9
Q ss_pred CeEEEEecCC---CCCCH--------HHHHHHHHcCCCeEEe-ecCC--CCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 29 MTKIVGTLGP---KSRSV--------DVISGCLKAGMSVARF-DFSW--GNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 29 ~tkIi~TiGp---~~~~~--------~~l~~l~~~G~~v~Ri-N~sh--g~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+...-+|+|+ .+.++ +..++..+.|.+.+.+ -..+ .+.++-.+.++.+|++ .|..+.|++|..
T Consensus 132 ~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a---~G~d~~l~vDan 208 (394)
T 3mqt_A 132 QLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREV---IGWDMDMMVDCL 208 (394)
T ss_dssp SBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred eEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHH---hCCCCeEEEECC
Confidence 3455678885 23332 2566788899999999 4553 4566666666666665 554455666644
No 444
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=28.26 E-value=1.3e+02 Score=27.02 Aligned_cols=47 Identities=13% Similarity=0.192 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEe
Q 036921 43 VDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVML 91 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~ 91 (527)
.+.++.+.++|++.+-|.+...+.++..+.++.+++..+.++ +.+++
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~--v~v~v 75 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD--ALFFV 75 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT--CEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC--CeEEE
Confidence 578999999999999888877888888888888888766555 34444
No 445
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=28.07 E-value=90 Score=31.41 Aligned_cols=50 Identities=8% Similarity=0.094 Sum_probs=37.0
Q ss_pred EEEecCC-CCCCHHHHHHHHHcCC---------------------CeEEeecCCCCHHHHHHHHHHHHHHHHH
Q 036921 32 IVGTLGP-KSRSVDVISGCLKAGM---------------------SVARFDFSWGNTEYHQETLENLKAAVKT 82 (527)
Q Consensus 32 Ii~TiGp-~~~~~~~l~~l~~~G~---------------------~v~RiN~shg~~e~~~~~i~~ir~~~~~ 82 (527)
+...+.+ ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 368 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 368 LWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp EEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHH
Confidence 3445543 2345566777887775 468999999 999999999999988665
No 446
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=28.03 E-value=2.9e+02 Score=31.82 Aligned_cols=86 Identities=17% Similarity=0.183 Sum_probs=50.8
Q ss_pred CceEEEee---cChHhHhhHHHHHHh--CCEEEEeC--------CCCcCCCCchhHHHHHHHHHHHHHHc-CCcEEE-ec
Q 036921 250 QTQIFAKI---ENIEGLTHFDEILQA--ADGIILSR--------GNLGIDLPPEKVFLFQKAALYKCNMA-GKPAVV-TR 314 (527)
Q Consensus 250 ~~~IiaKI---Et~~av~nldeI~~~--sDgImIaR--------gDLg~e~~~~~v~~~qk~Ii~~c~~~-gKpvi~-Tq 314 (527)
+..+++.| .+++....+-+.+.. .|+|-|.= .++|..+. .-+..-..+++..+++ ++|+++ .
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~--~~~~~~~~iv~~v~~~~~~Pv~vK~- 710 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACG--QDPELVRNICRWVRQAVQIPFFAKL- 710 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGG--GCHHHHHHHHHHHHHHCSSCEEEEE-
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccc--cCHHHHHHHHHHHHHhhCCceEEEe-
Confidence 44677766 456655555555533 59999941 12332221 2245556777777765 999998 5
Q ss_pred chhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeC
Q 036921 315 VVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLG 347 (527)
Q Consensus 315 ~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs 347 (527)
.|+-.++.+++. +...|+|+|.++
T Consensus 711 ---------~~~~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 711 ---------TPNVTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp ---------CSCSSCHHHHHHHHHHHTCSEEEEC
T ss_pred ---------CCChHHHHHHHHHHHHcCCCEEEEe
Confidence 233334555554 456799999995
No 447
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=28.02 E-value=3.1e+02 Score=24.99 Aligned_cols=62 Identities=13% Similarity=0.122 Sum_probs=38.4
Q ss_pred HHHHHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 402 VRAAIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 402 v~~a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
.+.......++|++=- .+|.. ++.+-+..|.+||+.++. .+......-.+-.|+..++..+.
T Consensus 60 l~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~------------~~~~~~~~~~~~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 60 LDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTA------------RDSLQDKIAGLTLGGDDYVTKPF 126 (250)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEEC------------STTHHHHHHHHTSTTCEEEESSC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEC------------CCCHHHHHHHHHcCCcEEEeCCC
Confidence 3344455678777642 35644 566666779999999853 12222233346778998888754
No 448
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=27.86 E-value=44 Score=31.22 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=37.3
Q ss_pred hcccccccEEEec-----CCCCHHHHHHHHHHHHHcCCCCCceEEE--eecChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 215 WGVQNKIDFLSLS-----YTRHAEDVRQAREYLSKLGDLSQTQIFA--KIENIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 215 ~~~~~g~d~I~~s-----fV~s~~dv~~lr~~l~~~~~~~~~~Iia--KIEt~~av~nldeI~~~-sDgImIaRgDL 283 (527)
...+.|+|+|-+. |...... ..++++... .++++++ .|.+++ .+++.++. +|+|++++..|
T Consensus 39 ~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~----~~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 39 GWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGK----LDVQVELSGGIRDDE---SLAAALATGCARVNVGTAAL 107 (244)
T ss_dssp HHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHH----CSSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHH
T ss_pred HHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHh----cCCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHh
Confidence 4478899999883 5555534 444443332 2356665 466654 35556655 69999987654
No 449
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=27.85 E-value=1.9e+02 Score=29.40 Aligned_cols=64 Identities=9% Similarity=0.104 Sum_probs=43.2
Q ss_pred CeEEEEecCCCCCC----HHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 29 MTKIVGTLGPKSRS----VDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 29 ~tkIi~TiGp~~~~----~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
+....++.|....+ .+..+++.+.|...+.+.....+.++-.+.++.+|++ .|..+.|++|..|
T Consensus 151 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~---~G~~~~l~vDaN~ 218 (388)
T 4h83_A 151 ELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREA---AGDDFIICIDANQ 218 (388)
T ss_dssp EEEEEEEECCTTCTTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHH---HCSSSEEEEECTT
T ss_pred ceEEEeeccccCCCHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHh---cCCCeEEEEecCc
Confidence 34445554433222 4667888999999999999887888777777777765 5555666666553
No 450
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=27.83 E-value=90 Score=31.75 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+..+++.++|.+.+.|+..|.+.+.-.+.++.+|++ .|..+.|++|..
T Consensus 155 ~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~d~~l~vDan 202 (391)
T 2qgy_A 155 RQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREI---VGDELPLMLDLA 202 (391)
T ss_dssp HHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHH---HCSSSCEEEECC
T ss_pred HHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHH---hCCCCEEEEEcC
Confidence 345667889999999998875556566666666665 454455666654
No 451
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=27.82 E-value=79 Score=29.19 Aligned_cols=79 Identities=15% Similarity=0.039 Sum_probs=44.9
Q ss_pred hcccccccEEEecCCC--------CHHHHHHHHHHHHHcCCCCCceEEE--eecChHhHhhHHHHHHh-CCEEEEeCCCC
Q 036921 215 WGVQNKIDFLSLSYTR--------HAEDVRQAREYLSKLGDLSQTQIFA--KIENIEGLTHFDEILQA-ADGIILSRGNL 283 (527)
Q Consensus 215 ~~~~~g~d~I~~sfV~--------s~~dv~~lr~~l~~~~~~~~~~Iia--KIEt~~av~nldeI~~~-sDgImIaRgDL 283 (527)
.+.+.|+|+|.+..+. +.+.++++++. . +++|++ =|.+ .+|+.+.++. +||+++|++=+
T Consensus 162 ~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~---~----~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 162 EVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS---V----RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp HHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH---C----SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh---c----CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHH
Confidence 4578899999875443 23344444432 1 344554 2333 3566666665 79999998654
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCcE
Q 036921 284 GIDLPPEKVFLFQKAALYKCNMAGKPA 310 (527)
Q Consensus 284 g~e~~~~~v~~~qk~Ii~~c~~~gKpv 310 (527)
....++ +++.+..+++|.++
T Consensus 232 ~~~~~~-------~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 232 FRVLSI-------AQVKRYLKERGVEV 251 (253)
T ss_dssp TTSSCH-------HHHHHHHHHTTCBC
T ss_pred cCCCCH-------HHHHHHHHHcCCCC
Confidence 444343 34444556677653
No 452
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=27.79 E-value=2.6e+02 Score=28.63 Aligned_cols=66 Identities=15% Similarity=0.114 Sum_probs=39.3
Q ss_pred CeEEEEecCCC-------CCCHHH----HHHHHHcCCCeEEeecCCC---------CHHHHHHHHHHHHHHHHHcCCceE
Q 036921 29 MTKIVGTLGPK-------SRSVDV----ISGCLKAGMSVARFDFSWG---------NTEYHQETLENLKAAVKTTKKLCA 88 (527)
Q Consensus 29 ~tkIi~TiGp~-------~~~~~~----l~~l~~~G~~v~RiN~shg---------~~e~~~~~i~~ir~~~~~~~~~v~ 88 (527)
+...-+++++. ..+++. .+++++.|.+.+.++.... +.+...+.++.++.+.+..|..+.
T Consensus 124 ~v~~yas~~~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~ 203 (412)
T 4e4u_A 124 RLRSYTYLYPKNAKGEYDYDDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKAD 203 (412)
T ss_dssp SEEEEEECCCBCTTSCBCSSCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSE
T ss_pred eeEEEEeccCCcccccccCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCe
Confidence 45556666542 235544 5567888999999997532 223344555555555555665566
Q ss_pred EEecCC
Q 036921 89 VMLDTV 94 (527)
Q Consensus 89 i~~Dl~ 94 (527)
|++|..
T Consensus 204 l~vDaN 209 (412)
T 4e4u_A 204 LLFGTH 209 (412)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 666654
No 453
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=27.71 E-value=1.6e+02 Score=29.69 Aligned_cols=95 Identities=17% Similarity=0.054 Sum_probs=62.1
Q ss_pred CCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh--CCEEEEeCC
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA--ADGIILSRG 281 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~--sDgImIaRg 281 (527)
++..+...+.+..-+.|+++|=-|+ .++|+..++++-.. -.++|+ -=|+....+.+.++++. +|+|++.++
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iEqP~--~~~~~~~~~~l~~~----~~iPI~-~de~i~~~~~~~~~i~~~~~d~v~ik~~ 273 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIEQPT--VSWSIPAMAHVREK----VGIPIV-ADQAAFTLYDVYEICRQRAADMICIGPR 273 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEECCS--CTTCHHHHHHHHHH----CSSCEE-ESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEeCCC--ChhhHHHHHHHHhh----CCCCEE-EeCCcCCHHHHHHHHHcCCCCEEEEcch
Confidence 4544443333344567999999887 34566655554332 235554 45777777788888864 699999765
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
-+|- +.--.++++.|+++|.++.+
T Consensus 274 ~~GG-------it~~~~i~~~A~~~g~~~~~ 297 (384)
T 2pgw_A 274 EIGG-------IQPMMKAAAVAEAAGLKICI 297 (384)
T ss_dssp HHTS-------HHHHHHHHHHHHHTTCCEEE
T ss_pred hhCC-------HHHHHHHHHHHHHCCCeEee
Confidence 5441 23345789999999999887
No 454
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=27.71 E-value=2.5e+02 Score=28.30 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=63.7
Q ss_pred CCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH--hCCEEEEeCC
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ--AADGIILSRG 281 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~--~sDgImIaRg 281 (527)
++..+...+.+..-+.|+++|=-|+-. +|+..++++-... .++|++ =|+......+.++++ ..|.|++..+
T Consensus 205 ~~~~~A~~~~~~l~~~~i~~iEqP~~~--~d~~~~~~l~~~~----~iPIa~-dE~~~~~~~~~~~i~~~~~d~v~~k~~ 277 (383)
T 3i4k_A 205 WDRRTALHYLPILAEAGVELFEQPTPA--DDLETLREITRRT----NVSVMA-DESVWTPAEALAVVKAQAADVIALKTT 277 (383)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEESCSCT--TCHHHHHHHHHHH----CCEEEE-STTCSSHHHHHHHHHHTCCSEEEECTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCCCh--hhHHHHHHHHhhC----CCCEEe-cCccCCHHHHHHHHHcCCCCEEEEccc
Confidence 444444333223346789999888643 3444444432222 355554 488778888888885 4699999876
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhh
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDS 318 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeS 318 (527)
-+|- + .--.+|+..|+++|.++.+..|+||
T Consensus 278 ~~GG---i----t~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 278 KHGG---L----LESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp TTTS---H----HHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred ccCC---H----HHHHHHHHHHHHcCCeEEeCCCCcc
Confidence 6652 2 3346789999999999877334443
No 455
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=27.66 E-value=4.4e+02 Score=25.79 Aligned_cols=123 Identities=12% Similarity=0.075 Sum_probs=63.9
Q ss_pred cccCCccccCCCCCHhhHHHHHhhcccccc-cEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEee--cChHhHhhHHH
Q 036921 192 LHASQIRIELPTLSDKDKEVISSWGVQNKI-DFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKI--ENIEGLTHFDE 268 (527)
Q Consensus 192 vnlp~~~~~lp~lt~~D~~di~~~~~~~g~-d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKI--Et~~av~nlde 268 (527)
+..|=..-++..++. .+... .+.+.|. .+|...++ +++.+.+..+.+.+.- +. .+.+.+ -++.--+.++.
T Consensus 11 ~~~Pii~apM~g~s~--~~la~-av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~--~~-p~gvnl~~~~~~~~~~~~~ 83 (332)
T 2z6i_A 11 IDYPIFQGGMAWVAD--GDLAG-AVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLT--DK-PFGVNIMLLSPFVEDIVDL 83 (332)
T ss_dssp CSSSEEECCCTTTCC--HHHHH-HHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHC--CS-CEEEEECTTSTTHHHHHHH
T ss_pred CCCCEEeCCCCCCCc--HHHHH-HHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhc--CC-CEEEEecCCCCCHHHHHHH
Confidence 334433333444443 33443 4456675 66666665 5666555444444321 11 222322 12221122333
Q ss_pred HHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEe
Q 036921 269 ILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346 (527)
Q Consensus 269 I~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imL 346 (527)
..+. .|+|.++-|. | ..+++.+++.|.|++. .. +.. ++..+...|+|++.+
T Consensus 84 a~~~g~d~V~~~~g~-----p--------~~~i~~l~~~g~~v~~~v~-----------~~~---~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 84 VIEEGVKVVTTGAGN-----P--------SKYMERFHEAGIIVIPVVP-----------SVA---LAKRMEKIGADAVIA 136 (332)
T ss_dssp HHHTTCSEEEECSSC-----G--------GGTHHHHHHTTCEEEEEES-----------SHH---HHHHHHHTTCSCEEE
T ss_pred HHHCCCCEEEECCCC-----h--------HHHHHHHHHcCCeEEEEeC-----------CHH---HHHHHHHcCCCEEEE
Confidence 3332 4999987552 2 2356777788999987 42 222 334566789999999
Q ss_pred CC
Q 036921 347 GA 348 (527)
Q Consensus 347 s~ 348 (527)
++
T Consensus 137 ~g 138 (332)
T 2z6i_A 137 EG 138 (332)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 456
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.61 E-value=49 Score=26.62 Aligned_cols=81 Identities=9% Similarity=0.005 Sum_probs=43.1
Q ss_pred CCCeEEeeeCCCCcEEeecCCEEEEeeCCCCCCCCcEEee-ccchhhhhcCCCCEEEEecccCCCceEEEEEEEEEEeeC
Q 036921 94 VGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPI-NFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKG 172 (527)
Q Consensus 94 ~GpkiR~~~~~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v-~~~~l~~~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~ 172 (527)
.-|+|++.......+.+..|+.+.|.....-.-.....+. +-..+ . ...-.+..+ ++.-.|.+ ..+..-+.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l-~--~~~~~~~~~----~~~~~L~i-~~~~~~D~ 91 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPL-D--TSRVHVRTS----DFDTVFFV-RQAARSDS 91 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEEC-C--CSSCEEEEC----SSEEEEEE-SSCCTTTC
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEEC-C--CCcEEEEEC----CCeEEEEE-CCCChhcC
Confidence 3577765322335689999999999875320011122222 22221 1 112233344 56655665 44433355
Q ss_pred CeEEEEEEeC
Q 036921 173 NDVTCVIKNT 182 (527)
Q Consensus 173 ~~v~~~v~~~ 182 (527)
+...|.+.|.
T Consensus 92 G~Y~C~a~N~ 101 (118)
T 2e7c_A 92 GEYELSVQIE 101 (118)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEEEeC
Confidence 6799999874
No 457
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=27.49 E-value=81 Score=32.76 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=39.8
Q ss_pred CHHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+.+.|++|.++|.++.|+-.- .++..+.+..||+-....+.++++..|+-
T Consensus 40 Tv~QI~~L~~aG~eiVRvaVp---~~~~A~al~~I~~~l~~~~~~vPLVADiH 89 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLTVN---DEEAAKAVPEIKRRLLAEGVEVPLVGDFH 89 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEECC---SHHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEecC---CHHHHHhHHHHHHHHHhcCCCCceEeeec
Confidence 467899999999999998754 35566777888776566788899999987
No 458
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=27.40 E-value=86 Score=27.42 Aligned_cols=52 Identities=12% Similarity=0.191 Sum_probs=38.3
Q ss_pred hHhhHHHHHH--hCCEEEE--eCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 262 GLTHFDEILQ--AADGIIL--SRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 262 av~nldeI~~--~sDgImI--aRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
.+..+++.+. ..|.|+| |-.|+....+.+++....+.+++.+++.|.++++ +
T Consensus 50 ~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 50 GLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3344444443 3575555 6679887788888889999999999999988776 5
No 459
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=27.40 E-value=58 Score=31.92 Aligned_cols=49 Identities=8% Similarity=0.042 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCeEEeecCCC---CH------------HHHHHHHHHHHHHHHHcCCceEEEecC
Q 036921 43 VDVISGCLKAGMSVARFDFSWG---NT------------EYHQETLENLKAAVKTTKKLCAVMLDT 93 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~shg---~~------------e~~~~~i~~ir~~~~~~~~~v~i~~Dl 93 (527)
.+.|+.|.+.|+|++|+.+.+- .+ +...+.++.+=+.+++.| +.+++||
T Consensus 48 ~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~G--i~vil~l 111 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHN--ILIFFTL 111 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcC--CEEEEEc
Confidence 4578889999999999975432 01 134455666666666777 5566676
No 460
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=27.36 E-value=1.3e+02 Score=24.16 Aligned_cols=76 Identities=12% Similarity=0.116 Sum_probs=42.4
Q ss_pred HHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCCCCCC
Q 036921 405 AIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAE 479 (527)
Q Consensus 405 a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~~~~~ 479 (527)
..+...++|++-. .+|.. .+.+-+..|.+||+.++.. .+..... -.+-.|+..++..+.
T Consensus 42 ~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~-----------~~~~~~~-~~~~~g~~~~l~kp~---- 105 (134)
T 3f6c_A 42 VETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK-----------NDHFYGK-HCADAGANGFVSKKE---- 105 (134)
T ss_dssp HHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC--------------CTHH-HHHHTTCSEEEEGGG----
T ss_pred HHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC-----------CChHHHH-HHHHhCCCEEEeCCC----
Confidence 3445678777754 34543 6667777899999988531 1222222 234568888877654
Q ss_pred CCccCHHHHHHHHHHHHHHcCC
Q 036921 480 STNATNESVLKVALDHGKASGV 501 (527)
Q Consensus 480 ~~~~~~e~~i~~a~~~a~e~g~ 501 (527)
+.+.+ ..++..+.+.+.
T Consensus 106 ----~~~~l-~~~i~~~~~~~~ 122 (134)
T 3f6c_A 106 ----GMNNI-IAAIEAAKNGYC 122 (134)
T ss_dssp ----CTHHH-HHHHHHHHTTCC
T ss_pred ----CHHHH-HHHHHHHHCCCE
Confidence 23333 345555555443
No 461
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=27.17 E-value=83 Score=31.93 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=31.5
Q ss_pred HHHHHHHcCCCeEEeecCCCC--------------HHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 45 VISGCLKAGMSVARFDFSWGN--------------TEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 45 ~l~~l~~~G~~v~RiN~shg~--------------~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
..+++.++|.+.+.|+..||. .......++.++.+.+..|..+.|++|..
T Consensus 144 ~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n 207 (392)
T 2poz_A 144 AVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLS 207 (392)
T ss_dssp HTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 446678999999999999842 12334444455544444565566666664
No 462
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=26.86 E-value=1.1e+02 Score=31.62 Aligned_cols=47 Identities=6% Similarity=0.133 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+..+++.++|.+.+.+...| +.+.-.+.++.+|++ .|..+.|++|..
T Consensus 191 ~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~a---vG~d~~l~vDan 237 (428)
T 3bjs_A 191 EEAQEYIARGYKALKLRIGD-AARVDIERVRHVRKV---LGDEVDILTDAN 237 (428)
T ss_dssp HHHHHHHHHTCSEEEEECCS-CHHHHHHHHHHHHHH---HCTTSEEEEECT
T ss_pred HHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHHHh---cCCCCEEEEECC
Confidence 45567788999999999988 566666777777765 454455566653
No 463
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=26.86 E-value=1.3e+02 Score=29.55 Aligned_cols=99 Identities=18% Similarity=0.164 Sum_probs=53.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCceEEEee----cChHhHhhHHHHHHh-CCEEEEe-CCCCcCCCCchhHHHHHHHHHHH
Q 036921 229 TRHAEDVRQAREYLSKLGDLSQTQIFAKI----ENIEGLTHFDEILQA-ADGIILS-RGNLGIDLPPEKVFLFQKAALYK 302 (527)
Q Consensus 229 V~s~~dv~~lr~~l~~~~~~~~~~IiaKI----Et~~av~nldeI~~~-sDgImIa-RgDLg~e~~~~~v~~~qk~Ii~~ 302 (527)
.++++.+.++.+.+.+. -..+|..|| +..+.++-+..+.+. .|+|.|- |.....--+...+ ..+..
T Consensus 108 ~~~~~~~~eiv~~v~~~---~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-----~~i~~ 179 (318)
T 1vhn_A 108 LKDLRHFRYIVRELRKS---VSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-----KALSV 179 (318)
T ss_dssp GSCHHHHHHHHHHHHHH---CSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-----GGGGG
T ss_pred hhCHHHHHHHHHHHHHh---hCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCH-----HHHHH
Confidence 45566666666666554 236899996 222333223333333 4888884 3222211121121 12333
Q ss_pred HHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHH-hCCcEEEeCC
Q 036921 303 CNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVL-DGSDAILLGA 348 (527)
Q Consensus 303 c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~-~g~D~imLs~ 348 (527)
.++ +.|+|. ..+ -| ..|+..++. .|+|+||+..
T Consensus 180 i~~-~ipVi~~GgI---------~s---~~da~~~l~~~gad~V~iGR 214 (318)
T 1vhn_A 180 LEK-RIPTFVSGDI---------FT---PEDAKRALEESGCDGLLVAR 214 (318)
T ss_dssp SCC-SSCEEEESSC---------CS---HHHHHHHHHHHCCSEEEESG
T ss_pred HHc-CCeEEEECCc---------CC---HHHHHHHHHcCCCCEEEECH
Confidence 334 899998 653 23 345566776 5999999974
No 464
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=26.83 E-value=1e+02 Score=31.22 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=39.4
Q ss_pred EEEEecCCCC--CCHHHHHHHHHc-CCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCCC
Q 036921 31 KIVGTLGPKS--RSVDVISGCLKA-GMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVG 95 (527)
Q Consensus 31 kIi~TiGp~~--~~~~~l~~l~~~-G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~G 95 (527)
..-+|+|-.+ .-.+..+++++. |.+.+.+.+...+.++-.+.++.+|++ .+..+.|++|..|
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a---~g~~~~l~vDan~ 203 (383)
T 3i4k_A 139 DVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE---VGDRVSLRIDINA 203 (383)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT---TTTTSEEEEECTT
T ss_pred EEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH---cCCCCEEEEECCC
Confidence 3345665322 112334556666 999999999887777766766666654 5555667777653
No 465
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=26.78 E-value=2.2e+02 Score=22.30 Aligned_cols=59 Identities=10% Similarity=0.120 Sum_probs=35.0
Q ss_pred HHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 405 AIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 405 a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
......+++++=- .+|.. .+.+.+..|.+||+.++. ..+.....+ .+-.|+..++..+.
T Consensus 43 ~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~-----------~~~~~~~~~-~~~~g~~~~l~KP~ 106 (124)
T 1srr_A 43 VTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTA-----------YGELDMIQE-SKELGALTHFAKPF 106 (124)
T ss_dssp HHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEES-----------SCCHHHHHH-HHHHTCCCEEESSC
T ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEc-----------cCchHHHHH-HHhcChHhhccCCC
Confidence 3445678777642 35543 566766789999998853 123333332 34567777776654
No 466
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=26.76 E-value=99 Score=31.52 Aligned_cols=61 Identities=21% Similarity=0.217 Sum_probs=39.1
Q ss_pred eEEEEecCCC--CCCHH----HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEE-ecCC
Q 036921 30 TKIVGTLGPK--SRSVD----VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVM-LDTV 94 (527)
Q Consensus 30 tkIi~TiGp~--~~~~~----~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~-~Dl~ 94 (527)
...-+|+|.. ..+++ ..+++++.|.+.+.+++.+ +.++-.+.++.+|++ .|..+.|+ +|..
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~-~~~~d~~~v~avR~a---~g~~~~l~~vDan 195 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK-NLDADEEFLSRVKEE---FGSRVRIKSYDFS 195 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS-CHHHHHHHHHHHHHH---HGGGCEEEEEECT
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC-CHHHHHHHHHHHHHH---cCCCCcEEEecCC
Confidence 4445777721 22343 3456778999999999987 666666666666665 44445566 6654
No 467
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=26.73 E-value=1.5e+02 Score=27.54 Aligned_cols=31 Identities=10% Similarity=-0.012 Sum_probs=23.2
Q ss_pred hcccccccEEEecC---CCCHHHHHHHHHHHHHcC
Q 036921 215 WGVQNKIDFLSLSY---TRHAEDVRQAREYLSKLG 246 (527)
Q Consensus 215 ~~~~~g~d~I~~sf---V~s~~dv~~lr~~l~~~~ 246 (527)
.+.+.|+|+|=+.. -.+. ++.++++.+.+.|
T Consensus 31 ~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~g 64 (264)
T 1yx1_A 31 LLAMAGAQRVELREELFAGPP-DTEALTAAIQLQG 64 (264)
T ss_dssp HHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcC
Confidence 56789999987752 2233 8899999999877
No 468
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=26.72 E-value=1.2e+02 Score=30.90 Aligned_cols=60 Identities=12% Similarity=0.070 Sum_probs=39.6
Q ss_pred eEEEEecCCCCCCHH----HHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcC-CceEEEecCC
Q 036921 30 TKIVGTLGPKSRSVD----VISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTV 94 (527)
Q Consensus 30 tkIi~TiGp~~~~~~----~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~-~~v~i~~Dl~ 94 (527)
...-+|+|-. +++ ..+++++.|.+.+.+.+...+.++-.+.++.+|++ .+ ..+.|++|..
T Consensus 154 v~~y~s~~~~--~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a---~gg~~~~L~vDaN 218 (391)
T 4e8g_A 154 VPSYYATGIG--QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWER---IRGTGTRLAVDGN 218 (391)
T ss_dssp EECCEEECSC--CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHH---HTTTTCEEEEECT
T ss_pred EEEeEEcCCC--CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHH---hCCCCCeEEEeCC
Confidence 4455677532 343 44567789999999999876777666666666654 44 4455666654
No 469
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=26.62 E-value=96 Score=33.37 Aligned_cols=45 Identities=11% Similarity=0.150 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCce
Q 036921 43 VDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLC 87 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v 87 (527)
.+.+++++++|++.+-|..-+.+.++..+..+.+++.++.++.++
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~l 72 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPL 72 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEE
Confidence 488999999999999999999999999999999999999887543
No 470
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=26.60 E-value=4.3e+02 Score=25.23 Aligned_cols=136 Identities=13% Similarity=0.063 Sum_probs=76.8
Q ss_pred CCccccCCCCCHhhH-HHHHhhcccccccEEE-----ecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecCh--------
Q 036921 195 SQIRIELPTLSDKDK-EVISSWGVQNKIDFLS-----LSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENI-------- 260 (527)
Q Consensus 195 p~~~~~lp~lt~~D~-~di~~~~~~~g~d~I~-----~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~-------- 260 (527)
|..++++..-|.++. +.+. .+...|+|.|= +....+.+++.++-..|++.- .+.++|.-+=+.
T Consensus 20 PkIcvpl~~~t~~e~l~~a~-~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~--~~lPiI~T~Rt~~EGG~~~~ 96 (258)
T 4h3d_A 20 PKICVPIIGKNKKDIIKEAK-ELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI--HDIPLLFTFRSVVEGGEKLI 96 (258)
T ss_dssp CEEEEEECCSSHHHHHHHHH-HHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC--TTSCEEEECCCGGGTCSCCC
T ss_pred CEEEEEeCCCCHHHHHHHHH-HHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc--CCCCEEEEEechhhCCCCCC
Confidence 556665554454443 3333 44667888763 333445555555544454432 356777766432
Q ss_pred ---HhHhhHHHHHHh--CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhH-
Q 036921 261 ---EGLTHFDEILQA--ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDV- 333 (527)
Q Consensus 261 ---~av~nldeI~~~--sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv- 333 (527)
+-++-+.+++.. +|.|=| |+... ....+.++..+++.|..+|. -|=+ +..|+..|+...
T Consensus 97 ~~~~~~~ll~~~~~~~~~d~iDv-------El~~~--~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP~~~el~~~~ 162 (258)
T 4h3d_A 97 SRDYYTTLNKEISNTGLVDLIDV-------ELFMG--DEVIDEVVNFAHKKEVKVIISNHDF-----NKTPKKEEIVSRL 162 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEE-------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCchhhHH-------hhhcc--HHHHHHHHHHHHhCCCEEEEEEecC-----CCCCCHHHHHHHH
Confidence 112223334332 344432 33222 24677899999999999998 6643 457888887554
Q ss_pred HHHHHhCCcEEEeC
Q 036921 334 ANAVLDGSDAILLG 347 (527)
Q Consensus 334 ~nav~~g~D~imLs 347 (527)
..+...|+|.+=+.
T Consensus 163 ~~~~~~gaDIvKia 176 (258)
T 4h3d_A 163 CRMQELGADLPKIA 176 (258)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHHHHhCCCEEEEE
Confidence 44666788876553
No 471
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=26.40 E-value=1.4e+02 Score=30.47 Aligned_cols=66 Identities=9% Similarity=0.082 Sum_probs=38.6
Q ss_pred CeEEEEe-cCCCCC-------CH----HHHHHHHHcCCCeEEeecC----CCC----------------HHHHHHHHHHH
Q 036921 29 MTKIVGT-LGPKSR-------SV----DVISGCLKAGMSVARFDFS----WGN----------------TEYHQETLENL 76 (527)
Q Consensus 29 ~tkIi~T-iGp~~~-------~~----~~l~~l~~~G~~v~RiN~s----hg~----------------~e~~~~~i~~i 76 (527)
+....+| +|.... ++ +..+++.+.|.+.+.|+.. ||. .......++.+
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v 208 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARI 208 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHH
Confidence 4667777 742111 34 3456678899999999985 675 12333344444
Q ss_pred HHHHHHcCCceEEEecCC
Q 036921 77 KAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 77 r~~~~~~~~~v~i~~Dl~ 94 (527)
+.+.+..|..+.|++|..
T Consensus 209 ~avR~a~G~d~~l~vDan 226 (410)
T 2gl5_A 209 AAMREAMGDDADIIVEIH 226 (410)
T ss_dssp HHHHHHHCSSSEEEEECT
T ss_pred HHHHHhcCCCCEEEEECC
Confidence 444444565566666654
No 472
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=26.36 E-value=2e+02 Score=25.88 Aligned_cols=87 Identities=10% Similarity=0.101 Sum_probs=51.2
Q ss_pred EeecCCEEEEeeCCC----CCCCCcEEeeccchhhh--hcCCCCEEEEecccCCCceEEEEEEEEEEeeCCeEEEEEEeC
Q 036921 109 SLKADGSVVLTPDCG----QEATSQVLPINFDGLAK--SVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNT 182 (527)
Q Consensus 109 ~l~~G~~v~l~~~~~----~~~~~~~i~v~~~~l~~--~v~~gd~i~id~~~~DG~i~l~V~l~~~~~~~~~v~~~v~~~ 182 (527)
-.+.|++..|+.... ..+......++-..|.. .+++|+.+.+.. -+|.+...| .+++++.|+ +.-+
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~--~~G~~~~~V----~~v~~~~V~--vD~N 122 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAET--DQGPVPVEI----TAVEDDHVV--VDGN 122 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEE--TTEEEEEEE----EEECSSEEE--EESC
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEEC--CCCcEEEEE----EEEcCCEEE--EeCC
Confidence 357888888876532 23444566676666654 589999999972 256544445 556667665 3334
Q ss_pred cEecCCCcccccCCccccCCCCC
Q 036921 183 ATLAGSLFTLHASQIRIELPTLS 205 (527)
Q Consensus 183 G~l~~~~kgvnlp~~~~~lp~lt 205 (527)
.-| ..|.+++--.-+.+..-|
T Consensus 123 HPL--AGk~L~F~vev~~v~~at 143 (171)
T 2k8i_A 123 HML--AGQNLKFNVEVVAIREAT 143 (171)
T ss_dssp CSS--CCCEEEEEEEEEEEEECC
T ss_pred CCC--CCCeEEEEEEEEEeccCC
Confidence 445 456666544433333334
No 473
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=26.34 E-value=3.8e+02 Score=24.52 Aligned_cols=110 Identities=11% Similarity=0.047 Sum_probs=62.8
Q ss_pred hHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEe-----------ecChHhHhhHHHHHHh-CCE
Q 036921 208 DKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAK-----------IENIEGLTHFDEILQA-ADG 275 (527)
Q Consensus 208 D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaK-----------IEt~~av~nldeI~~~-sDg 275 (527)
+...+.+.+.+.|+++|.+ ++++.++.+++.. +++++.- |+. -.+.+++.++. +|.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-------~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~~~Gad~ 104 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-------DLPIIGIIKKDYPPQEPFITA--TMTEVDQLAALNIAV 104 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-------CSCEEEECBCCCTTSCCCBSC--SHHHHHHHHTTTCSE
T ss_pred hHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-------CCCEEeeEcCCCCccccccCC--hHHHHHHHHHcCCCE
Confidence 4444434557889999876 4788888877642 2344321 221 23445555554 599
Q ss_pred EEEeCCCCcCCCCchhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEE--EeCC
Q 036921 276 IILSRGNLGIDLPPEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAI--LLGA 348 (527)
Q Consensus 276 ImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~i--mLs~ 348 (527)
|.+.-.-+.-.-+ +.+ .++++.+++. +++++. .. |..| ...+...|+|.+ .+.+
T Consensus 105 V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~~-----------t~~e---a~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 105 IAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADIS-----------TFDE---GLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp EEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEECS-----------SHHH---HHHHHHTTCSEEECTTTT
T ss_pred EEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeCC-----------CHHH---HHHHHHcCCCEEeeeccc
Confidence 9876432210000 111 4677777777 788776 43 2233 566778899999 4443
No 474
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=26.31 E-value=2.8e+02 Score=27.54 Aligned_cols=100 Identities=16% Similarity=0.150 Sum_probs=64.0
Q ss_pred CCHhhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh--CCEEEEeCC
Q 036921 204 LSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA--ADGIILSRG 281 (527)
Q Consensus 204 lt~~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~--sDgImIaRg 281 (527)
+|..+.+.++ ..-+.|+++|=-|+ .++|+...+++-.. ..++| +-=|+....+.+.++++. .|.|.+-..
T Consensus 194 ~~~~~~~~~~-~l~~~~i~~iE~P~--~~~~~~~~~~l~~~----~~ipI-a~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 265 (368)
T 1sjd_A 194 YTLGDAPQLA-RLDPFGLLLIEQPL--EEEDVLGHAELARR----IQTPI-CLDESIVSARAAADAIKLGAVQIVNIKPG 265 (368)
T ss_dssp CCGGGHHHHH-TTGGGCCSEEECCS--CTTCHHHHHHHHTT----CSSCE-EESTTCCSHHHHHHHHHTTCCSEEEECTT
T ss_pred CCHHHHHHHH-HHHhcCCCeEeCCC--ChhhHHHHHHHHHh----CCCCE-EECCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 4545544443 44668999988886 24566666553221 23554 445887777888888854 699999554
Q ss_pred CCcCCCCchhHHHHHHHHHHHHHHcCCcEEEecchhh
Q 036921 282 NLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDS 318 (527)
Q Consensus 282 DLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~Tq~LeS 318 (527)
-.| |+ .--.++++.|+++|.++++.+|+||
T Consensus 266 ~~G---Gi----t~~~~i~~~A~~~g~~~~~~~~~es 295 (368)
T 1sjd_A 266 RVG---GY----LEARRVHDVCAAHGIPVWCGGMIET 295 (368)
T ss_dssp TTT---SH----HHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred ccC---CH----HHHHHHHHHHHHcCCcEEeCCcccc
Confidence 443 22 2235789999999999866555543
No 475
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=26.28 E-value=3.9e+02 Score=25.72 Aligned_cols=127 Identities=22% Similarity=0.271 Sum_probs=70.2
Q ss_pred ccccccEEEecCCCCHHHHHHHHHHHHHc---CCCCCceEEE--eecChH----------------hHhhHHHHHHhC--
Q 036921 217 VQNKIDFLSLSYTRHAEDVRQAREYLSKL---GDLSQTQIFA--KIENIE----------------GLTHFDEILQAA-- 273 (527)
Q Consensus 217 ~~~g~d~I~~sfV~s~~dv~~lr~~l~~~---~~~~~~~Iia--KIEt~~----------------av~nldeI~~~s-- 273 (527)
.+.|+|++.+.-.-..+-++.+++.+.+. |. ..+.+++ ..-+.. .+.++-.....+
T Consensus 80 ~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~-~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~ 158 (259)
T 3tfx_A 80 AKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGH-SVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGA 158 (259)
T ss_dssp HTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTS-CCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTC
T ss_pred HhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCC-CCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCC
Confidence 57899999887666667788887777542 21 2344444 343321 122233333332
Q ss_pred CEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCc-EEEecchhhhhcCCCCChHhhhh------HHHHHHhCCcEEEe
Q 036921 274 DGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKP-AVVTRVVDSMTDNLRPTRAEATD------VANAVLDGSDAILL 346 (527)
Q Consensus 274 DgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKp-vi~Tq~LeSM~~~p~PtraEv~D------v~nav~~g~D~imL 346 (527)
||++.. .+++..+.+ ..|.- .++|== -+|.-+...| ...++..|+|.++.
T Consensus 159 dGvV~s---------~~e~~~ir~-------~~~~~f~~vtPG-------Ir~~g~~~gDQ~Rv~T~~~a~~aGad~iVv 215 (259)
T 3tfx_A 159 DGVICS---------PLEVKKLHE-------NIGDDFLYVTPG-------IRPAGNAKDDQSRVATPKMAKEWGSSAIVV 215 (259)
T ss_dssp CEEECC---------GGGHHHHHH-------HHCSSSEEEECC-------CCCC-----------CHHHHHHTTCSEEEE
T ss_pred CEEEEC---------HHHHHHHHh-------hcCCccEEEcCC-------cCCCCCCcCCccccCCHHHHHHcCCCEEEE
Confidence 777753 344433322 12333 232311 1666666666 66789999999998
Q ss_pred CCccccCCChHHHHHHHHHHH
Q 036921 347 GAETLRGLYPVETISIVGKIC 367 (527)
Q Consensus 347 s~Eta~G~yP~e~V~~~~~i~ 367 (527)
..-......|.++++.+++.+
T Consensus 216 Gr~I~~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 216 GRPITLASDPKAAYEAIKKEF 236 (259)
T ss_dssp CHHHHTSSSHHHHHHHHHHHH
T ss_pred ChHHhCCCCHHHHHHHHHHHH
Confidence 766666678999887776644
No 476
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=26.26 E-value=78 Score=28.52 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=38.6
Q ss_pred HhHhhHHHHHHh---CCE--EEEeCCCC----cCCCCchhHHHHHHHHHHHHHHcCCcEEE-e
Q 036921 261 EGLTHFDEILQA---ADG--IILSRGNL----GIDLPPEKVFLFQKAALYKCNMAGKPAVV-T 313 (527)
Q Consensus 261 ~av~nldeI~~~---sDg--ImIaRgDL----g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-T 313 (527)
..+..+++++.. .|. |++|-.|+ ....+.+.+..-.+.+++.++++|..+++ |
T Consensus 58 ~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 58 WALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp HHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 444556666553 364 45577798 45677888888889999999999988887 5
No 477
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=26.22 E-value=60 Score=34.10 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCCeEEeecCCCC---------------H----HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 43 VDVISGCLKAGMSVARFDFSWGN---------------T----EYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 43 ~~~l~~l~~~G~~v~RiN~shg~---------------~----e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
.+.++.|.+.|+|++|+-++... + +...+.++.+=+.+++.| +.+++|+-
T Consensus 87 ~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~G--i~VIldlH 155 (458)
T 3qho_A 87 EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLG--IFVLLDYH 155 (458)
T ss_dssp HHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCC--CEEEEecc
Confidence 57899999999999999876321 1 134566666666666666 67788875
No 478
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=26.22 E-value=2.8e+02 Score=28.11 Aligned_cols=30 Identities=30% Similarity=0.331 Sum_probs=24.0
Q ss_pred CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCC
Q 036921 307 GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGA 348 (527)
Q Consensus 307 gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~ 348 (527)
..|+|. ..+- --.|+..++..|||++|+..
T Consensus 272 ~ipVia~GGI~------------~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 272 KIEVYMDGGVR------------TGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SSEEEEESSCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 589998 6642 34789999999999999973
No 479
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=26.10 E-value=3.1e+02 Score=27.44 Aligned_cols=88 Identities=11% Similarity=0.062 Sum_probs=56.4
Q ss_pred HHHHHHH----cCCCCCceEEEeecChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcC---Cc
Q 036921 238 AREYLSK----LGDLSQTQIFAKIENIEGLTHFDEILQA-ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAG---KP 309 (527)
Q Consensus 238 lr~~l~~----~~~~~~~~IiaKIEt~~av~nldeI~~~-sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~g---Kp 309 (527)
+|+.|.. .|. ..+.++..+.+++.++.+ ... .|.|++..-|--. ..+ .+.+. +..+...| ++
T Consensus 28 lk~~l~~~~~~~g~-~~ig~~l~i~~p~~~e~a---~~~GaD~vilDlEha~~--~~e---~~~~~-l~a~~~~~~~~~~ 97 (339)
T 1izc_A 28 LRQALKDAMADPSK-TLMGVAHGIPSTFVTKVL---AATKPDFVWIDVEHGMF--NRL---ELHDA-IHAAQHHSEGRSL 97 (339)
T ss_dssp HHHHHHHHHHCGGG-CEEEEEECSCCHHHHHHH---HHTCCSEEEEETTTSCC--CHH---HHHHH-HHHHHHHTTTCSE
T ss_pred HHHHHHhhhccCCC-eEEEEEEECCCHHHHHHH---HhCCCCEEEEECCCCCC--cHH---HHHHH-HHHhhhcCCCCCe
Confidence 6666651 231 346688888877655433 222 5999998777432 222 34433 55666666 89
Q ss_pred EEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 310 AVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 310 vi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
+++ +.-+++ .|+..++..|+|+||+.
T Consensus 98 ~~VRv~~~~~------------~di~~~LdaGa~gImlP 124 (339)
T 1izc_A 98 VIVRVPKHDE------------VSLSTALDAGAAGIVIP 124 (339)
T ss_dssp EEEECCTTCH------------HHHHHHHHHTCSEEEET
T ss_pred EEEEeCCCCH------------HHHHHHHhCCCCEEEeC
Confidence 998 764421 58888888899999997
No 480
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=26.10 E-value=4.6e+02 Score=25.49 Aligned_cols=109 Identities=11% Similarity=-0.021 Sum_probs=61.1
Q ss_pred hcccccc-cEEEecCCCCHHHHHHHHHHHHHcC-CCCCceEEEee--cChHhHhhHHHHHHh-CCEEEEeCCCCcCCCCc
Q 036921 215 WGVQNKI-DFLSLSYTRHAEDVRQAREYLSKLG-DLSQTQIFAKI--ENIEGLTHFDEILQA-ADGIILSRGNLGIDLPP 289 (527)
Q Consensus 215 ~~~~~g~-d~I~~sfV~s~~dv~~lr~~l~~~~-~~~~~~IiaKI--Et~~av~nldeI~~~-sDgImIaRgDLg~e~~~ 289 (527)
.+...|. .++......+++++.+..+.+.+.- .+..+.++..- ..+.--+.++.+++. .|+|.++-|+ |
T Consensus 34 av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-----p- 107 (328)
T 2gjl_A 34 AVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-----P- 107 (328)
T ss_dssp HHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-----C-
T ss_pred HHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-----c-
Confidence 3455664 4554556667888765544444321 11233444420 022222344555544 5999987442 2
Q ss_pred hhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCcc
Q 036921 290 EKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAET 350 (527)
Q Consensus 290 ~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Et 350 (527)
..+++.++++|+|++. .. |.. +...+...|+|++.+++=+
T Consensus 108 -------~~~~~~l~~~gi~vi~~v~-----------t~~---~a~~~~~~GaD~i~v~g~~ 148 (328)
T 2gjl_A 108 -------GEHIAEFRRHGVKVIHKCT-----------AVR---HALKAERLGVDAVSIDGFE 148 (328)
T ss_dssp -------HHHHHHHHHTTCEEEEEES-----------SHH---HHHHHHHTTCSEEEEECTT
T ss_pred -------HHHHHHHHHcCCCEEeeCC-----------CHH---HHHHHHHcCCCEEEEECCC
Confidence 3566778888999886 32 222 3445777899999996533
No 481
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=26.07 E-value=1.3e+02 Score=29.76 Aligned_cols=46 Identities=13% Similarity=0.196 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCeEEeecCCCCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+..+++.+.|.+.+.+...| +.++-.+.++.+|++ |..+.|++|-.
T Consensus 145 ~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~----g~~~~l~vDan 190 (345)
T 2zad_A 145 KEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKV----TRGAKYIVDAN 190 (345)
T ss_dssp HHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHH----STTCEEEEECT
T ss_pred HHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHhh----CCCCeEEEECC
Confidence 34566788999999999988 455555556666653 43455555543
No 482
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=26.07 E-value=3.7e+02 Score=24.30 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=65.1
Q ss_pred hhHHHHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecCh---------HhHhhHHHHHHh-CCEE
Q 036921 207 KDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENI---------EGLTHFDEILQA-ADGI 276 (527)
Q Consensus 207 ~D~~di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~---------~av~nldeI~~~-sDgI 276 (527)
.+...+.+...+.|++++.+ .+.+.++++++.. +.+++..+-+. .-.+.++..++. +|.+
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~-------~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v 92 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRA---NTKEDILAIKETV-------DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVI 92 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHC-------CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred ccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhc-------CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEE
Confidence 34444433556889999865 5788888887653 23343211110 112345555554 5999
Q ss_pred EEeCCCCcCCCCchhHHHHHHHHHHHHHHc--CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeC
Q 036921 277 ILSRGNLGIDLPPEKVFLFQKAALYKCNMA--GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLG 347 (527)
Q Consensus 277 mIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~--gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs 347 (527)
.++-.++. -|.+.+ .++++.+++. |+++++ .. |..| +..+...|+|.++.+
T Consensus 93 ~l~~~~~~--~p~~~~----~~~i~~~~~~~~~~~v~~~~~-----------t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 93 ALDATLQQ--RPKETL----DELVSYIRTHAPNVEIMADIA-----------TVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp EEECSCSC--CSSSCH----HHHHHHHHHHCTTSEEEEECS-----------SHHH---HHHHHHTTCSEEECT
T ss_pred EEeeeccc--CcccCH----HHHHHHHHHhCCCceEEecCC-----------CHHH---HHHHHHcCCCEEEeC
Confidence 88754431 110122 4678888888 888876 42 3333 445777899999975
No 483
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=25.91 E-value=3.7e+02 Score=26.41 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=53.4
Q ss_pred HHHHHh-CCEEEEeCCCCc--CCCCchhHHHHHHHHHHHHHHc---CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHh
Q 036921 267 DEILQA-ADGIILSRGNLG--IDLPPEKVFLFQKAALYKCNMA---GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLD 339 (527)
Q Consensus 267 deI~~~-sDgImIaRgDLg--~e~~~~~v~~~qk~Ii~~c~~~---gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~ 339 (527)
+..++. .||+++. |=-| ..+..++ ++++++.+.++ ..|+|. +. ..+-.|.-+.+....+
T Consensus 35 ~~li~~Gv~Gl~v~-GtTGE~~~Ls~~E----r~~v~~~~~~~~~grvpViaGvg---------~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 35 EHLLAHHTDGILLA-GTTAESPTLTHDE----ELELFAAVQKVVNGRVPLIAGVG---------TNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHTTCCCEEES-STTTTGGGSCHHH----HHHHHHHHHHHSCSSSCEEEECC---------CSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHH----HHHHHHHHHHHhCCCCcEEEeCC---------CcCHHHHHHHHHHHHh
Confidence 334433 4899985 2222 2233333 33444444443 469998 65 4455677776665555
Q ss_pred -CC-cEEEeCCccccCCChHHHHHHHHHHHHHHh
Q 036921 340 -GS-DAILLGAETLRGLYPVETISIVGKICAEAE 371 (527)
Q Consensus 340 -g~-D~imLs~Eta~G~yP~e~V~~~~~i~~~aE 371 (527)
|+ |++|+..=--...-+-+.++..+.|+..+.
T Consensus 101 ~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~ 134 (311)
T 3h5d_A 101 FGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASD 134 (311)
T ss_dssp SCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCS
T ss_pred cCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 87 999997443333335677888888876653
No 484
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=25.87 E-value=60 Score=30.79 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=36.4
Q ss_pred HHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCChHHHHHHHH
Q 036921 296 QKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVG 364 (527)
Q Consensus 296 qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~yP~e~V~~~~ 364 (527)
.+..++.++++|++|.+ |- + + -.++..++..|+|+|+- .||..+.+++.
T Consensus 200 ~~~~v~~~~~~G~~v~~wTv------n----~---~~~~~~l~~~GvdgIiT-------D~P~~~~~~l~ 249 (252)
T 2pz0_A 200 IPELVEGCKKNGVKLFPWTV------D----R---KEDMERMIKAGVDGIIT-------DDPETLINLVR 249 (252)
T ss_dssp CHHHHHHHHHTTCEECCBCC------C----S---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHC
T ss_pred CHHHHHHHHHCCCEEEEECC------C----C---HHHHHHHHHcCCCEEEc-------CCHHHHHHHHh
Confidence 36789999999999999 82 1 1 23456677789999876 48987766543
No 485
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=25.86 E-value=82 Score=31.53 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=37.5
Q ss_pred EEEecCCCCCCHHHHHHHHHcCC-------------CeEEeecCCCCHHHHHHHHHHHHHHHHH
Q 036921 32 IVGTLGPKSRSVDVISGCLKAGM-------------SVARFDFSWGNTEYHQETLENLKAAVKT 82 (527)
Q Consensus 32 Ii~TiGp~~~~~~~l~~l~~~G~-------------~v~RiN~shg~~e~~~~~i~~ir~~~~~ 82 (527)
+...+. ..+..+..+.|.+.|+ +.+||+|++.+.++..+.++.++++.++
T Consensus 374 ~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 374 FTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 334443 3345667777888876 6799999988999999999999987653
No 486
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=25.79 E-value=1.2e+02 Score=23.89 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=38.5
Q ss_pred CcEEeecCCEEEEeeCCCCCCCCcEEe-eccchhhhhcCCCCE--EEEecccCCCceEEEEEEEEEEeeCCeEEEEEEeC
Q 036921 106 KAISLKADGSVVLTPDCGQEATSQVLP-INFDGLAKSVKKGDT--IFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNT 182 (527)
Q Consensus 106 ~~i~l~~G~~v~l~~~~~~~~~~~~i~-v~~~~l~~~v~~gd~--i~id~~~~DG~i~l~V~l~~~~~~~~~v~~~v~~~ 182 (527)
..+.+.+|+.+.|...-.-.-.....+ -|-..+.. ..+.+ +.-+ ++.-.|.+ ..+..-+.+...|.+.|.
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~--~~~~~~~~~~~----~~~~~L~I-~~~~~~D~G~Y~C~a~N~ 85 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHS--QEQGRFHIENT----DDLTTLII-MDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCT--TGGGTEEEEEC----SSEEEEEE-SSCCGGGCEEEEEEEEET
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeee--eccceeeeecc----cceEEEEE-cCCCccCCEEEEEEEEEC
Confidence 458899999999987632001112222 23222211 11112 2333 55566666 444443567899999884
Q ss_pred -cEe
Q 036921 183 -ATL 185 (527)
Q Consensus 183 -G~l 185 (527)
|.-
T Consensus 86 ~G~~ 89 (100)
T 3knb_A 86 FGSD 89 (100)
T ss_dssp TEEE
T ss_pred CCEE
Confidence 443
No 487
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=25.76 E-value=42 Score=33.82 Aligned_cols=53 Identities=11% Similarity=0.134 Sum_probs=35.2
Q ss_pred CHHHHHHHHHcCCCeEEeecCCCC----------HHHHHHHHHHHHHHHHHcCCceEEEecCCCC
Q 036921 42 SVDVISGCLKAGMSVARFDFSWGN----------TEYHQETLENLKAAVKTTKKLCAVMLDTVGP 96 (527)
Q Consensus 42 ~~~~l~~l~~~G~~v~RiN~shg~----------~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~Gp 96 (527)
+.+++..|.+.|+|++||-++... .+...+.++++=+.+.+.| +.+++|+-.-
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~G--i~vIlDlH~~ 107 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLG--AYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTT--CEEEEEECST
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCC--CEEEEEecCC
Confidence 456667778899999999987421 1234455555555555566 7788998753
No 488
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=25.74 E-value=3.5e+02 Score=26.49 Aligned_cols=10 Identities=10% Similarity=-0.087 Sum_probs=6.1
Q ss_pred CCEEEEEEec
Q 036921 505 HDRVVVCQKV 514 (527)
Q Consensus 505 GD~VVvv~g~ 514 (527)
-|.||+-.|.
T Consensus 178 ~d~vv~pvG~ 187 (325)
T 3dwg_A 178 ITHFVAGLGT 187 (325)
T ss_dssp CCEEEEECSS
T ss_pred CCEEEEecCc
Confidence 4666666664
No 489
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=25.70 E-value=2.4e+02 Score=27.38 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=47.0
Q ss_pred CCEEEEeCCCC--cCCCCchhHHHHHHHHHHHHHHcCCcEEE-ecchhhhhcCCCCChHhhhhHHH-HHHhCCcEEEeCC
Q 036921 273 ADGIILSRGNL--GIDLPPEKVFLFQKAALYKCNMAGKPAVV-TRVVDSMTDNLRPTRAEATDVAN-AVLDGSDAILLGA 348 (527)
Q Consensus 273 sDgImIaRgDL--g~e~~~~~v~~~qk~Ii~~c~~~gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~n-av~~g~D~imLs~ 348 (527)
.||+++. |=- +..+..++-..+-+.+++.++. ..|+|. +. ..+-.|.-+.+. |-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gvg---------~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 36 TDAIIVC-GTTGEATTMTETERKETIKFVIDKVNK-RIPVIAGTG---------SNNTAASIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp CCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------cccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 5999884 221 2234445544555555555432 589998 65 334455555444 6667999999974
Q ss_pred ccccCCChHHHHHHHHHHHHH
Q 036921 349 ETLRGLYPVETISIVGKICAE 369 (527)
Q Consensus 349 Eta~G~yP~e~V~~~~~i~~~ 369 (527)
=--...-+-+.++..+.|+..
T Consensus 105 P~y~~~s~~~l~~~f~~ia~a 125 (291)
T 3a5f_A 105 PYYNKTTQKGLVKHFKAVSDA 125 (291)
T ss_dssp CCSSCCCHHHHHHHC-CTGGG
T ss_pred CCCCCCCHHHHHHHHHHHHHh
Confidence 322222234445555555443
No 490
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=25.59 E-value=1.8e+02 Score=27.47 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=43.5
Q ss_pred HHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHhCCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 235 VRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 235 v~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
++.+.+.+.+.+ ..+.+.+.-+... -+|++++++-.|.|+.+-++ +.....+.+.|++.|+|.+.
T Consensus 87 a~~~~~~l~~~n--p~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~ 151 (249)
T 1jw9_B 87 VESARDALTRIN--PHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVS 151 (249)
T ss_dssp HHHHHHHHHHHC--TTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHC--CCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEE
Confidence 445555566655 5555555333332 25788888888999887332 23667888999999999887
No 491
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=25.58 E-value=1.5e+02 Score=30.17 Aligned_cols=51 Identities=12% Similarity=0.173 Sum_probs=31.0
Q ss_pred HHHHHHHHcCCCeEEeecC----CCC-----------HHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFS----WGN-----------TEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~s----hg~-----------~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+..+++.+.|.+.+.|+.. ||. .......++.++.+.+..|..+.|++|..
T Consensus 152 ~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan 217 (403)
T 2ox4_A 152 EEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENH 217 (403)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 3456678899999999975 674 12333344444444344565566666664
No 492
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=25.51 E-value=2.8e+02 Score=22.77 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=36.8
Q ss_pred HHHHhcCCcEEEEEC----CCcHH-HHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccc-cEEEecCCC
Q 036921 403 RAAIKVKASVIICFT----SSGRA-ARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRG-LFPMLADPR 475 (527)
Q Consensus 403 ~~a~~~~a~~Ivv~T----~sG~t-A~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~G-V~P~l~~~~ 475 (527)
+.......++|++-. .+|.. .+.+-+..|.+|||.++. ..+...... .+..| +..++..+.
T Consensus 52 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~-----------~~~~~~~~~-~~~~g~~~~~l~KP~ 118 (153)
T 3hv2_A 52 QLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTG-----------DPDLKLIAK-AINEGEIYRYLSKPW 118 (153)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECC-----------CCCHHHHHH-HHHTTCCSEEECSSC
T ss_pred HHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEEC-----------CCCHHHHHH-HHhCCCcceEEeCCC
Confidence 344556788777743 34443 556667789999998842 123333333 34556 888877654
No 493
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=25.38 E-value=1.5e+02 Score=30.00 Aligned_cols=67 Identities=12% Similarity=0.147 Sum_probs=41.0
Q ss_pred hcccccccEEEecC------------CCCHHHHHHHHHH----HHHcCCCC-CceEEEeecChHhHhhHHHHHH----hC
Q 036921 215 WGVQNKIDFLSLSY------------TRHAEDVRQAREY----LSKLGDLS-QTQIFAKIENIEGLTHFDEILQ----AA 273 (527)
Q Consensus 215 ~~~~~g~d~I~~sf------------V~s~~dv~~lr~~----l~~~~~~~-~~~IiaKIEt~~av~nldeI~~----~s 273 (527)
.+.+.|+|+|.++. +-+.+.+.++++. +.+.+ . ++.||+- -|+.+-.+|++ =+
T Consensus 227 ~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~--~~~ipvia~----GGI~~~~dv~kalalGA 300 (393)
T 2qr6_A 227 HMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETG--GRYVHIIAD----GSIENSGDVVKAIACGA 300 (393)
T ss_dssp HHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHT--SCCCEEEEC----SSCCSHHHHHHHHHHTC
T ss_pred HHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcC--CcceEEEEE----CCCCCHHHHHHHHHcCC
Confidence 45789999999975 3344445555554 22233 2 3788872 34444444444 37
Q ss_pred CEEEEeCCCCcCCC
Q 036921 274 DGIILSRGNLGIDL 287 (527)
Q Consensus 274 DgImIaRgDLg~e~ 287 (527)
|++++||.=|+..-
T Consensus 301 ~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 301 DAVVLGSPLARAEE 314 (393)
T ss_dssp SEEEECGGGGGSTT
T ss_pred CEEEECHHHHcCCC
Confidence 99999998766554
No 494
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=25.30 E-value=2.1e+02 Score=29.09 Aligned_cols=62 Identities=16% Similarity=0.070 Sum_probs=39.1
Q ss_pred eEEEEecCC---CCCCHH--------HHHHHHHcCCCeEEe-ecCC--CCHHHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 30 TKIVGTLGP---KSRSVD--------VISGCLKAGMSVARF-DFSW--GNTEYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 30 tkIi~TiGp---~~~~~~--------~l~~l~~~G~~v~Ri-N~sh--g~~e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
....+|+|+ .+.+++ ..+++.+.|.+.+.+ -+.. .+.++-.+.++.+|++ .|..+.|++|..
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a---~G~d~~l~vDaN 213 (394)
T 3mkc_A 138 VHPYLTLYPAIPVDASLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGI---LGHDTDMMVDYL 213 (394)
T ss_dssp ECCEEECCCSCC-CCCHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred eEEEEecCCcCCCCcchhhhHHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHH---hCCCCeEEEeCC
Confidence 445678874 233322 566788899999999 4543 4566666666666665 555556666653
No 495
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=25.30 E-value=2.4e+02 Score=31.10 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=71.1
Q ss_pred CHhhHHHHHhhcccccccEEEecCC------------CCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHHh
Q 036921 205 SDKDKEVISSWGVQNKIDFLSLSYT------------RHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQA 272 (527)
Q Consensus 205 t~~D~~di~~~~~~~g~d~I~~sfV------------~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~~ 272 (527)
++.-+.-| .||.++|.++|.+--- .-..|+.+|.++..++| +.|+.--|+..--+++++.++.
T Consensus 308 ~~~~k~yI-DfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kg----V~i~lw~~~~~~~~~~~~~~~~ 382 (641)
T 3a24_A 308 NPTYKAYI-DFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKN----VGIILWAGYHAFERDMENVCRH 382 (641)
T ss_dssp HHHHHHHH-HHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTT----CEEEEEEEHHHHHTSHHHHHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcC----CEEEEEeeCcchHHHHHHHHHH
Confidence 44456667 4999999999997211 01247999999998865 7888888886645567777775
Q ss_pred -----CCEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 273 -----ADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 273 -----sDgImIaRgDLg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
.+||-++=-| -.-..+.....+|++.|.+++.-|..
T Consensus 383 ~~~~Gv~gvK~Df~~----~~~Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 383 YAEMGVKGFKVDFMD----RDDQEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HHHHTCCEEEEECCC----CCSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCCEEEECCCC----CCcHHHHHHHHHHHHHHHHcCCEEEc
Confidence 3898875221 11157778889999999999988776
No 496
>3koj_A Uncharacterized protein YCF41; single-strand binding protein family, PF00436, SNR59A, NESG, structural genomics, PSI-2; 1.90A {Synechococcus elongatus pcc 6301}
Probab=25.30 E-value=1.9e+02 Score=24.17 Aligned_cols=24 Identities=13% Similarity=0.238 Sum_probs=19.2
Q ss_pred chhhhhcCCCCEEEEecccCCCceEEEEE
Q 036921 136 DGLAKSVKKGDTIFIGQYLFTGSETTSVW 164 (527)
Q Consensus 136 ~~l~~~v~~gd~i~id~~~~DG~i~l~V~ 164 (527)
+.+.+.++.||.|++. |+|+..-|
T Consensus 65 E~~~~yl~KG~~V~Ve-----GrL~~r~y 88 (108)
T 3koj_A 65 QELQDRCRLNDEVVLE-----GRLRINSL 88 (108)
T ss_dssp HHHHHHCCTTCEEEEE-----EEEEEEC-
T ss_pred HHHHHhCCCCCEEEEE-----EEEEeeeE
Confidence 4556779999999999 99987764
No 497
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=25.29 E-value=3.6e+02 Score=24.00 Aligned_cols=121 Identities=12% Similarity=0.041 Sum_probs=65.4
Q ss_pred HHHhhcccccccEEEecCCCCHHHHHHHHHHHHHcCCCCCceEEEeecChHhHhhHHHHHH-hCCEEEEeCCCCcCCCCc
Q 036921 211 VISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQ-AADGIILSRGNLGIDLPP 289 (527)
Q Consensus 211 di~~~~~~~g~d~I~~sfV~s~~dv~~lr~~l~~~~~~~~~~IiaKIEt~~av~nldeI~~-~sDgImIaRgDLg~e~~~ 289 (527)
.+. .+.+.|+|+| ++..-+.+ +.+...+.| +.+++-+-|.+-+. .-++ -+|.+-+-++.+. +
T Consensus 75 ~~~-~a~~~Gad~i-v~~~~~~~----~~~~~~~~g----~~vi~g~~t~~e~~---~a~~~Gad~vk~~~~~~~---g- 137 (205)
T 1wa3_A 75 QCR-KAVESGAEFI-VSPHLDEE----ISQFCKEKG----VFYMPGVMTPTELV---KAMKLGHTILKLFPGEVV---G- 137 (205)
T ss_dssp HHH-HHHHHTCSEE-ECSSCCHH----HHHHHHHHT----CEEECEECSHHHHH---HHHHTTCCEEEETTHHHH---H-
T ss_pred HHH-HHHHcCCCEE-EcCCCCHH----HHHHHHHcC----CcEECCcCCHHHHH---HHHHcCCCEEEEcCcccc---C-
Confidence 343 4578999999 54444443 333344444 67787665544221 1122 2477766432110 1
Q ss_pred hhHHHHHHHHHHHHHHc-CCcEEE-ecchhhhhcCCCCChHhhhhHHHHHHhCCcEEEeCCccccCCC---hHHHHHHHH
Q 036921 290 EKVFLFQKAALYKCNMA-GKPAVV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLY---PVETISIVG 364 (527)
Q Consensus 290 ~~v~~~qk~Ii~~c~~~-gKpvi~-Tq~LeSM~~~p~PtraEv~Dv~nav~~g~D~imLs~Eta~G~y---P~e~V~~~~ 364 (527)
.+.+-+.+... +.|++. ..+ .| .++..+...|+|++...+-... .. |.+.++.+.
T Consensus 138 ------~~~~~~l~~~~~~~pvia~GGI--------~~-----~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~ 197 (205)
T 1wa3_A 138 ------PQFVKAMKGPFPNVKFVPTGGV--------NL-----DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFV 197 (205)
T ss_dssp ------HHHHHHHHTTCTTCEEEEBSSC--------CT-----TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCCcEEEcCCC--------CH-----HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHH
Confidence 11222222334 688887 553 12 2567777889999998754433 45 666666665
Q ss_pred HHHH
Q 036921 365 KICA 368 (527)
Q Consensus 365 ~i~~ 368 (527)
+.++
T Consensus 198 ~~~~ 201 (205)
T 1wa3_A 198 EKIR 201 (205)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 498
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=25.28 E-value=2.9e+02 Score=28.00 Aligned_cols=91 Identities=9% Similarity=0.096 Sum_probs=56.4
Q ss_pred hhcccccccEEEecC------CCCHHHHHHH-HHHHHHcCCCCCceEEEeec---ChHhHhhHHHHHHh-CCEEEEeCCC
Q 036921 214 SWGVQNKIDFLSLSY------TRHAEDVRQA-REYLSKLGDLSQTQIFAKIE---NIEGLTHFDEILQA-ADGIILSRGN 282 (527)
Q Consensus 214 ~~~~~~g~d~I~~sf------V~s~~dv~~l-r~~l~~~~~~~~~~IiaKIE---t~~av~nldeI~~~-sDgImIaRgD 282 (527)
++.++.|+|+|++.- --|.++=+++ +...+..+ .+++||+-+= |.++++....-.+. +||+|+-+-.
T Consensus 87 ~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~--grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 87 NIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--GSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 164 (360)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC--CCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 477899999988832 2233444443 34444445 6789999773 55666555444444 5999987654
Q ss_pred CcCCCCchhHHHHHHHHHHHHHHcCCcEEE
Q 036921 283 LGIDLPPEKVFLFQKAALYKCNMAGKPAVV 312 (527)
Q Consensus 283 Lg~e~~~~~v~~~qk~Ii~~c~~~gKpvi~ 312 (527)
.. ..+.+.+...-+.|.++ .|+++
T Consensus 165 Y~-k~sq~gl~~hf~~IA~a-----~Piil 188 (360)
T 4dpp_A 165 YG-KTSIEGLIAHFQSVLHM-----GPTII 188 (360)
T ss_dssp SS-CCCHHHHHHHHHTTGGG-----SCEEE
T ss_pred CC-CCCHHHHHHHHHHHHHh-----CCEEE
Confidence 43 23556666666666552 59887
No 499
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=25.22 E-value=47 Score=32.14 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCCeEEeecCCCCH--HHHHHHHHHHHHHHHHcCCceEEEecCC
Q 036921 44 DVISGCLKAGMSVARFDFSWGNT--EYHQETLENLKAAVKTTKKLCAVMLDTV 94 (527)
Q Consensus 44 ~~l~~l~~~G~~v~RiN~shg~~--e~~~~~i~~ir~~~~~~~~~v~i~~Dl~ 94 (527)
+.++.|-+.|+|++|+-++.+.. ....+.++.+=+.+.+.| +.+++|+-
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~G--i~Vild~h 86 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNR--LICMLEVH 86 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT--CEEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCC--CEEEEEec
Confidence 67899999999999998864310 001233444444455566 66788875
No 500
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=25.19 E-value=1.6e+02 Score=24.31 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=37.4
Q ss_pred HHHHHhcCCcEEEEEC----CCcH-HHHHHHhhCCCCCEEEEeeccccccccccccCcHHHHHhhccccccEEEecCCC
Q 036921 402 VRAAIKVKASVIICFT----SSGR-AARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPR 475 (527)
Q Consensus 402 v~~a~~~~a~~Ivv~T----~sG~-tA~~is~~RP~~PIiAv~~~~~~~~~~~~~t~~~~~aR~L~L~~GV~P~l~~~~ 475 (527)
.+.......++|++-. .+|. ..+.+.+..|.+||+.++. ..+.....+ .+-.|+.-++..+.
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~-----------~~~~~~~~~-~~~~g~~~~l~kp~ 110 (153)
T 3cz5_A 44 YRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTM-----------HQGSAFALK-AFEAGASGYVTKSS 110 (153)
T ss_dssp HHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES-----------CCSHHHHHH-HHHTTCSEEEETTS
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEEC-----------CCCHHHHHH-HHHCCCcEEEecCC
Confidence 3444556678777633 3444 3666777789999998852 123333332 35578888877654
Done!