BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036924
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1
Length = 411
Score = 556 bits (1434), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/295 (90%), Positives = 279/295 (94%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFR+QHDN
Sbjct: 1 MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P LSISELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIGIH DVPAPDMGTGPQTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RDAATGRGV+F EALLNEHGK I+GQRFVIQGFGNVGSWAA+LI EKGGKIVAVSDI+G
Sbjct: 181 RDAATGRGVMFGTEALLNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
AIKN GID+P+LLKH KEHRGVKGF G D ID NSIL+EDCD+L+PAALGGVIN
Sbjct: 241 AIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVIN 295
>sp|Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia GN=GDHB PE=2
SV=1
Length = 411
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/295 (89%), Positives = 281/295 (95%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNFKLA+RLLGLDSKLE+ LLIPFREIKVECTIPKDDG+LA+F+GFR+QHDN
Sbjct: 1 MNALAATNRNFKLASRLLGLDSKLEQCLLIPFREIKVECTIPKDDGSLATFIGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGC+P DLSISELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPSDLSISELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIG+H DVPAPDMGT PQTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RDAATGRGVLFA EALL +HGK+IAGQRFV+QGFGNVGSWAA+LI E+GGKIVAVSDI+G
Sbjct: 181 RDAATGRGVLFAAEALLRDHGKSIAGQRFVVQGFGNVGSWAAQLITEQGGKIVAVSDITG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
AIKN GID+ SLLKHVKE+RGVKGF G DSID NSIL+EDCDVLIPAALGGVIN
Sbjct: 241 AIKNKNGIDIASLLKHVKENRGVKGFHGADSIDPNSILVEDCDVLIPAALGGVIN 295
>sp|P93541|DHE3_SOLLC Glutamate dehydrogenase OS=Solanum lycopersicum GN=GDH1 PE=2 SV=1
Length = 412
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/295 (89%), Positives = 278/295 (94%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNFKLAARLLGLDSKLE SLLIPFREIKVECTIPKDDGTLASFVGFR+QHDN
Sbjct: 1 MNALAATNRNFKLAARLLGLDSKLELSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGC+P DLSISELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPSDLSISELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIGIH DVPAPDMGT PQTMAWILDEYSKFHG+SPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RDAATGRG LFA EALLNEHGK++AGQRFVIQGFGNVGSWAA+LI E+GGK+VAVSDI+G
Sbjct: 181 RDAATGRGALFATEALLNEHGKSVAGQRFVIQGFGNVGSWAAKLIHEQGGKVVAVSDITG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
AIKN KGID+ SL KHVKE RGVKGF ID+NSIL+EDCDVLIPAALGGVIN
Sbjct: 241 AIKNEKGIDIESLFKHVKETRGVKGFHDAHPIDANSILVEDCDVLIPAALGGVIN 295
>sp|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3 OS=Arabidopsis thaliana GN=GSH3
PE=1 SV=1
Length = 411
Score = 547 bits (1409), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/295 (88%), Positives = 281/295 (95%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNFKLA+RLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFR+QHDN
Sbjct: 1 MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEV+PDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LS+SELERL
Sbjct: 61 ARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSELSLSELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIGIH DVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RDAATGRGVLFA EALLNEHGK I+GQRF IQGFGNVGSWAA+LI +KGGKIVAVSD++G
Sbjct: 181 RDAATGRGVLFATEALLNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
AIKN+ GID+ SLL+H +E+RG+KGF G DSID +SIL+EDCD+L+PAALGGVIN
Sbjct: 241 AIKNNNGIDILSLLEHAEENRGIKGFDGADSIDPDSILVEDCDILVPAALGGVIN 295
>sp|Q43260|DHE3_MAIZE Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 SV=1
Length = 411
Score = 523 bits (1347), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/295 (84%), Positives = 273/295 (92%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL AT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDGTLAS+VGFR+QHDN
Sbjct: 1 MNALAATSRNFKQAAKLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYH EVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGC+P DLSISELERL
Sbjct: 61 ARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPGDLSISELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIGIH DVPAPDMGT QTMAWILDEYSKFHG+SPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RDAATGRGVLFA EALL EHGK IAGQRFVIQGFGNVGSWAA+LI E GGK++A+SD++G
Sbjct: 181 RDAATGRGVLFATEALLAEHGKGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+KN G+D+ L+KH E++G+KGF GGD+I +S+L E+CDVLIPAALGGVIN
Sbjct: 241 AVKNVDGLDIAQLVKHSAENKGIKGFKGGDAIAPDSLLTEECDVLIPAALGGVIN 295
>sp|P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera GN=GDH PE=2 SV=1
Length = 411
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/295 (80%), Positives = 263/295 (89%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNF+ A+R+LGLDSKLEKSLLIPFREIKVECTIPKDDG+LA++VGFR+QHDN
Sbjct: 1 MNALAATNRNFRHASRILGLDSKLEKSLLIPFREIKVECTIPKDDGSLATYVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAV +IPYGGAKGGIGC P DLS+SELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVVDIPYGGAKGGIGCTPKDLSMSELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIG H DVPAPDMGT QTMAWILDEYSKFHGHSPAVVTGKPI LGGSLG
Sbjct: 121 TRVFTQKIHDLIGTHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIALGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
R+AATGRGV+FA EALL +HGK+I G FVIQGFGNVGSW ARLIGE+GGKI+AVSD++G
Sbjct: 181 REAATGRGVVFATEALLAQHGKSIKGLTFVIQGFGNVGSWVARLIGERGGKIIAVSDVTG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+KN G+D+ LL+H +E + FSGGD +D N +L +CDVLIP ALGGV+N
Sbjct: 241 AVKNQNGLDIVDLLRHKEETGCLTNFSGGDHMDPNELLTHECDVLIPCALGGVLN 295
>sp|Q38946|DHE2_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1
Length = 411
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/295 (79%), Positives = 269/295 (91%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNF+ A+R+LGLDSK+E+SL+IPFREIKVECTIPKDDGTL S++GFR+QHDN
Sbjct: 1 MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA+IPYGGAKGGIGC+P DLS+SELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIGIH DVPAPDMGT QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
R+AATGRGV+FA EALL E+GK+I G FVIQGFGNVG+WAA+LI EKGGK+VAVSDI+G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
AI+N +GID+ +L+KH + F+GGD+++S+ +LI +CDVLIP ALGGV+N
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLN 295
>sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2
SV=1
Length = 411
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/295 (78%), Positives = 262/295 (88%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
MNAL ATNRNF+ AAR+LGLDSKLEKSLLIPFREIKVECTIPKDDGTL S+VGFR+QHDN
Sbjct: 1 MNALAATNRNFRQAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
ARGPMKGGIRYHPEVD DEVNALAQLMTWKTAVA+IPYGGAKGGIGC P DLS SELERL
Sbjct: 61 ARGPMKGGIRYHPEVDLDEVNALAQLMTWKTAVADIPYGGAKGGIGCKPKDLSKSELERL 120
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
TRVFTQKIHDLIGI+ DVPAPDMGT QTMAWILDEYSKFHGHSPA+VTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGINTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
R+AATGRGV++A EALL E+GKNI F IQGFGNVG+WAA+LI E+GGK++AVSDI+G
Sbjct: 181 REAATGRGVVYATEALLAEYGKNIKDLTFAIQGFGNVGAWAAKLIHERGGKVIAVSDITG 240
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+KN G+D+P+LL H + + FSGGD ++S+ +L +CDVLIP ALGGV+N
Sbjct: 241 AVKNPNGLDIPALLNHKEATGKLIDFSGGDVMNSDEVLTHECDVLIPCALGGVLN 295
>sp|P29051|DHE41_HALSI NAD-specific glutamate dehydrogenase A OS=Halobacterium salinarum
GN=gdhA PE=1 SV=1
Length = 435
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 187/296 (63%), Gaps = 4/296 (1%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
+AL R AA L +D + + L P + +V I +DDGT+ F G+R QHD+
Sbjct: 26 SALETARRQLYHAASYLDIDQNIVERLKYPKKVHEVTIPIERDDGTVEVFTGYRAQHDSV 85
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
RGP KGG+RYHP+V DE L MTWK AV ++P+GGAKGG+ NP +LS E ERLT
Sbjct: 86 RGPYKGGLRYHPDVTRDECVGLGMWMTWKCAVMDLPFGGAKGGVAVNPKELSPEEKERLT 145
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH-SPAVVTGKPIDLGGSLG 180
R FTQ+I D+IG + D+PAPDMGT PQTMAW++D YS G +P VVTGKP +GGS G
Sbjct: 146 RRFTQEIRDVIGPNQDIPAPDMGTDPQTMAWLMDAYSMQEGETTPGVVTGKPPVVGGSEG 205
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
R+ A GR V + + + + + +QG+G+VG+ AARL+ + G IVA+SD++G
Sbjct: 206 REEAPGRSVAIITQLVCEYYDQPLDETTVAVQGYGSVGANAARLLDKWGATIVAISDVNG 265
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSN-SILIEDCDVLIPAALGGVIN 295
A+ GID S+ H +E V ++ D++ SN +L D DVLIPAALG VI
Sbjct: 266 AMYEPDGIDTASVPSHDEEPEAVTTYA--DTVISNEELLTLDVDVLIPAALGNVIT 319
>sp|P96110|DHE3_THEMA Glutamate dehydrogenase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=gdhA PE=1 SV=4
Length = 416
Score = 260 bits (664), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 185/288 (64%), Gaps = 2/288 (0%)
Query: 10 NFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGI 69
F AA L+ L+S L + L P R + VE + DDG + F G+R+QH+ ARGP KGGI
Sbjct: 13 QFNRAASLMDLESDLAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGI 72
Query: 70 RYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIH 129
RYHP+V DEV ALA MTWKTAV N+P+GG KGG+ +P LS +ELERL+R F +I
Sbjct: 73 RYHPDVTLDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRNELERLSRRFFSEIQ 132
Query: 130 DLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGRDAATGRG 188
+IG + D+PAPD+ T MAW +D YS GH+ +VTGKP++LGGS GR+ ATGRG
Sbjct: 133 VIIGPYNDIPAPDVNTNADVMAWYMDTYSMNVGHTVLGIVTGKPVELGGSKGREEATGRG 192
Query: 189 VLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKG 247
V ++ G + +QGFGNVG +AA LI ++ G K+VAVSD G I N +G
Sbjct: 193 VKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEG 252
Query: 248 IDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
DV L+++ KEH V + G+ I + +L D D+L+PAAL G I+
Sbjct: 253 FDVEELIRYKKEHGTVVTYPKGERITNEELLELDVDILVPAALEGAIH 300
>sp|P80053|DHE2_SULSO Glutamate dehydrogenase 2 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=gdhA-2 PE=1 SV=3
Length = 420
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 177/282 (62%), Gaps = 3/282 (1%)
Query: 16 RLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEV 75
LLGLD++ ++L P R I+V+ I DG L +F+G+R QH++A GP KGG+RYHP V
Sbjct: 23 ELLGLDNETLETLSQPERIIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYHPNV 82
Query: 76 DPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHDLIGIH 135
DEV AL+ +MTWK ++ +PYGG KGG+ +P L+ ELE+L+R + Q I+ +G
Sbjct: 83 TQDEVEALSMIMTWKNSLLLLPYGGGKGGVRVDPKKLTREELEQLSRKYIQAIYKYLGSE 142
Query: 136 ADVPAPDMGTGPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGRDAATGRGVLFAME 194
D+PAPD+ T QTMAW LDEY K G AV TGKP++LGG R +TG GV +
Sbjct: 143 LDIPAPDVNTDSQTMAWFLDEYIKITGKVDFAVFTGKPVELGGIGVRLYSTGLGVATIAK 202
Query: 195 ALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLL 254
N+ + R +IQGFGNVG +A + + E G KIV VSD G + N KGIDV +
Sbjct: 203 EAANKFIGGVEEARVIIQGFGNVGYYAGKFLSEMGAKIVGVSDSKGGVINEKGIDVGKAI 262
Query: 255 KHVKEHRG-VKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
+KE G V + G + + +LI DCD+LIPAAL VIN
Sbjct: 263 -EIKEKTGSVINYPEGRKVTNEELLISDCDILIPAALENVIN 303
>sp|P39633|DHE2_BACSU Catabolic NAD-specific glutamate dehydrogenase RocG OS=Bacillus
subtilis (strain 168) GN=rocG PE=1 SV=3
Length = 424
Score = 246 bits (628), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 183/296 (61%), Gaps = 2/296 (0%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
+N ++T K A R LG + + + P R + V + D+G++ F G+R QH++
Sbjct: 15 LNLFLSTQTIIKEALRKLGYPGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHND 74
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
A GP KGG+R+HPEV+ +EV AL+ MT K +AN+PYGG KGGI C+P +S ELERL
Sbjct: 75 AVGPTKGGVRFHPEVNEEEVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERL 134
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH-SPAVVTGKPIDLGGSL 179
+R + + I ++G D+PAPD+ T Q MAW++DEYS+ SP +TGKP+ LGGS
Sbjct: 135 SRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQ 194
Query: 180 GRDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDIS 239
GR+ AT +GV +E + + G + R +IQGFGN GS+ A+ + + G K++ +SD +
Sbjct: 195 GRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDAN 254
Query: 240 GAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
G + N G+D+P LL ++ G+ D I + +L +DCD+L+PAA+ I
Sbjct: 255 GGLYNPDGLDIPYLLDK-RDSFGMVTNLFTDVITNEELLEKDCDILVPAAISNQIT 309
>sp|Q7A1B9|DHE2_STAAW NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=gluD PE=3 SV=1
Length = 414
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 2/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
N + +T K A LG D + + P R ++V + DDGT+ +F G+R QH++A
Sbjct: 6 NLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDA 65
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
GP KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+
Sbjct: 66 VGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLS 125
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLG 180
R + + I +G + D+PAPD+ T Q MAW++DEYS +SP +TGKPI LGGS G
Sbjct: 126 RGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHG 185
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RD +T GV+ A+E I G + VIQGFGN GS+ A+ + + G KIV +SD G
Sbjct: 186 RDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYG 245
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I
Sbjct: 246 ALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQIT 299
>sp|Q6GAW8|DHE2_STAAS NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=gluD PE=3 SV=1
Length = 414
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 2/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
N + +T K A LG D + + P R ++V + DDGT+ +F G+R QH++A
Sbjct: 6 NLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDA 65
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
GP KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+
Sbjct: 66 VGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLS 125
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLG 180
R + + I +G + D+PAPD+ T Q MAW++DEYS +SP +TGKPI LGGS G
Sbjct: 126 RGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHG 185
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RD +T GV+ A+E I G + VIQGFGN GS+ A+ + + G KIV +SD G
Sbjct: 186 RDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYG 245
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I
Sbjct: 246 ALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQIT 299
>sp|Q6GID0|DHE2_STAAR NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=gluD PE=3 SV=1
Length = 414
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 2/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
N + +T K A LG D + + P R ++V + DDGT+ +F G+R QH++A
Sbjct: 6 NLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDA 65
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
GP KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+
Sbjct: 66 VGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLS 125
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLG 180
R + + I +G + D+PAPD+ T Q MAW++DEYS +SP +TGKPI LGGS G
Sbjct: 126 RGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHG 185
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RD +T GV+ A+E I G + VIQGFGN GS+ A+ + + G KIV +SD G
Sbjct: 186 RDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYG 245
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I
Sbjct: 246 ALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQIT 299
>sp|Q7A6H8|DHE2_STAAN NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=gluD PE=1 SV=1
Length = 414
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 2/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
N + +T K A LG D + + P R ++V + DDGT+ +F G+R QH++A
Sbjct: 6 NLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDA 65
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
GP KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+
Sbjct: 66 VGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLS 125
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLG 180
R + + I +G + D+PAPD+ T Q MAW++DEYS +SP +TGKPI LGGS G
Sbjct: 126 RGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHG 185
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RD +T GV+ A+E I G + VIQGFGN GS+ A+ + + G KIV +SD G
Sbjct: 186 RDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYG 245
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I
Sbjct: 246 ALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQIT 299
>sp|Q99VD0|DHE2_STAAM NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=gluD PE=1 SV=1
Length = 414
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 2/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
N + +T K A LG D + + P R ++V + DDGT+ +F G+R QH++A
Sbjct: 6 NLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDA 65
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
GP KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+
Sbjct: 66 VGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLS 125
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLG 180
R + + I +G + D+PAPD+ T Q MAW++DEYS +SP +TGKPI LGGS G
Sbjct: 126 RGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHG 185
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RD +T GV+ A+E I G + VIQGFGN GS+ A+ + + G KIV +SD G
Sbjct: 186 RDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYG 245
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I
Sbjct: 246 ALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQIT 299
>sp|Q5HHC7|DHE2_STAAC NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=gluD PE=3 SV=1
Length = 414
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 179/295 (60%), Gaps = 2/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
N + +T K A LG D + + P R ++V + DDGT+ +F G+R QH++A
Sbjct: 6 NLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDA 65
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
GP KGG+R+HP+VD +EV AL+ MT K + N+PYGG KGGI C+P +SI E+ERL+
Sbjct: 66 VGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLS 125
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHG-HSPAVVTGKPIDLGGSLG 180
R + + I +G + D+PAPD+ T Q MAW++DEYS +SP +TGKPI LGGS G
Sbjct: 126 RGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHG 185
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
RD +T GV+ A+E I G + VIQGFGN GS+ A+ + + G KIV +SD G
Sbjct: 186 RDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYG 245
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
A+ + G+D+ LL ++ G ++I + + DCD+L+PAA+ I
Sbjct: 246 ALHDPNGLDIDYLLDR-RDSFGTVTNLFEETISNKELFELDCDILVPAAISNQIT 299
>sp|O74024|DHE3_THEPR Glutamate dehydrogenase OS=Thermococcus profundus GN=gdhA PE=1 SV=1
Length = 419
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 177/291 (60%), Gaps = 4/291 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V I DDG++ F GFR+QH+ ARGP KGG
Sbjct: 12 KQLERAAQYMDISEEALEWLKKPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HP V ALA MTWK AV ++PYGG KGGI NP +LS E ERL R + + +
Sbjct: 72 IRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAV 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAAT 185
+D+IG D+PAPD+ T P+ M W++DEY + G + V+TGKP+ +GGSLGR AT
Sbjct: 132 YDVIGPWTDIPAPDVYTNPKIMGWMMDEYETIMRRKGPAFGVITGKPLSIGGSLGRGTAT 191
Query: 186 GRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKN 244
+G +F + G ++ G++ +QG+GN G + A+L E+ G +VAVSD G I N
Sbjct: 192 AQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYN 251
Query: 245 SKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
G+D +LK +EH VK F G +I + +L + DVL PAA+ VI
Sbjct: 252 PDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVIT 302
>sp|P39475|DHE4_SULSH NADP-specific glutamate dehydrogenase (Fragment) OS=Sulfolobus
shibatae GN=gdhA PE=3 SV=1
Length = 390
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 169/271 (62%), Gaps = 1/271 (0%)
Query: 26 KSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQ 85
++L P R I+V+ I DG L +F+G+R QH++A GP KGG+RY P V DEV AL+
Sbjct: 5 EALSQPERVIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYSPNVTQDEVIALSM 64
Query: 86 LMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGT 145
+MTWK ++ +PYGG KGGI +P L++ ELE L+R + Q IH+ +G D+PAPD+ T
Sbjct: 65 IMTWKNSLLLLPYGGGKGGIRVDPKKLTLKELEDLSRKYVQLIHNYLGSDVDIPAPDINT 124
Query: 146 GPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGKNI 204
PQTMAW LDEY K G AV TGKP +LGG R +TG GV N+ I
Sbjct: 125 NPQTMAWFLDEYIKITGEVDFAVFTGKPSELGGIGVRLYSTGLGVATIAREAANKFIGGI 184
Query: 205 AGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVK 264
G R +IQGFGNVGS+ A+ + E G KI+ VSDI G + + GIDV L+ V+ V
Sbjct: 185 EGSRVIIQGFGNVGSFTAKFLNEMGAKIIGVSDIGGGVISDDGIDVNKALEVVQSTGSVV 244
Query: 265 GFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
+ G + + +L DCD+LIPAA+ VIN
Sbjct: 245 NYPEGKKVTNEELLTSDCDILIPAAVENVIN 275
>sp|Q47951|DHE3_PYREN Glutamate dehydrogenase OS=Pyrococcus endeavori GN=gdhA PE=1 SV=1
Length = 420
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDGT+ F GFR+Q++ ARGP KGG
Sbjct: 12 KQLERAAQYMKISEEALEFLKRPQRIVEVTIPVEMDDGTVKVFTGFRVQYNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + I
Sbjct: 72 IRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAI 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAAT 185
+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT
Sbjct: 132 YDVISPYEDIPAPDVYTNPQIMAWMMDEYEAISRRKTPAFGIITGKPLSIGGSLGRNEAT 191
Query: 186 GRGVLFAMEALLNEHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGG-KIVAVSDISGAIK 243
RG + + G ++ G+ IQG+GN G + A+++ E G K+VAVSD G I
Sbjct: 192 ARGASYTIREARKVLGWGDLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIY 251
Query: 244 NSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
N G++ +LK +EH VK F G +I + +L + DVL PAA+ VI
Sbjct: 252 NPDGLNADEVLKWKQEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVIT 303
>sp|Q47950|DHE3_PYRAB Glutamate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=gdhA PE=3 SV=2
Length = 420
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDG++ F GFR+Q++ ARGP KGG
Sbjct: 12 KQLERAAQYMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + I
Sbjct: 72 IRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAI 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAAT 185
+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT
Sbjct: 132 YDVISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEAT 191
Query: 186 GRGVLFAMEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEKGG-KIVAVSDISGAIK 243
RG + + G ++ G+ IQG+GN G + A+++ E G K+VAVSD G I
Sbjct: 192 ARGASYTIREAAKVLGWDDLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIY 251
Query: 244 NSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
N G++ +LK +EH VK F G +I + +L + DVL PAA+ VI
Sbjct: 252 NPDGLNADEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVIT 303
>sp|P0CL72|DHE3_PYRHR Glutamate dehydrogenase OS=Pyrococcus horikoshii GN=gdhA PE=3 SV=1
Length = 420
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDG++ F GFR+Q++ ARGP KGG
Sbjct: 12 KQLERAAQHMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + +
Sbjct: 72 IRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAV 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAAT 185
+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT
Sbjct: 132 YDIISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEAT 191
Query: 186 GRGVLFAMEALLNEHGKN-IAGQRFVIQGFGNVGSWAARLIGEKGG-KIVAVSDISGAIK 243
RG + + G + + G+ IQG+GN G + A+++ E G K+VAVSD G I
Sbjct: 192 ARGASYTIREAAKVLGWDGLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIY 251
Query: 244 NSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
N G++ +LK +EH VK F G +I + +L D DVL PAA+ VI
Sbjct: 252 NPDGLNADEVLKWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVIT 303
>sp|P0CL73|DHE3_PYRHO Glutamate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=gdhA PE=3 SV=1
Length = 420
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDG++ F GFR+Q++ ARGP KGG
Sbjct: 12 KQLERAAQHMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + +
Sbjct: 72 IRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAV 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAAT 185
+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT
Sbjct: 132 YDIISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEAT 191
Query: 186 GRGVLFAMEALLNEHGKN-IAGQRFVIQGFGNVGSWAARLIGEKGG-KIVAVSDISGAIK 243
RG + + G + + G+ IQG+GN G + A+++ E G K+VAVSD G I
Sbjct: 192 ARGASYTIREAAKVLGWDGLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIY 251
Query: 244 NSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
N G++ +LK +EH VK F G +I + +L D DVL PAA+ VI
Sbjct: 252 NPDGLNADEVLKWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVIT 303
>sp|P80319|DHE3_PYRFU Glutamate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gdhA PE=1 SV=2
Length = 420
Score = 234 bits (598), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 177/292 (60%), Gaps = 5/292 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDG++ F GFR+QH+ ARGP KGG
Sbjct: 12 KQLERAAQYMEISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + I
Sbjct: 72 IRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAI 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAAT 185
+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR AT
Sbjct: 132 YDVISPYEDIPAPDVYTNPQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEAT 191
Query: 186 GRGVLFAMEALLNEHGKN-IAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIK 243
RG + + G + + G+ IQG+GN G + A+++ E G K+VAVSD G I
Sbjct: 192 ARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIY 251
Query: 244 NSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
N G++ +LK EH VK F G +I + +L + DVL PAA+ VI
Sbjct: 252 NPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVIT 303
>sp|Q9HSM4|DHE42_HALSA NADP-specific glutamate dehydrogenase B OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=gdhB PE=3
SV=1
Length = 429
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 175/295 (59%), Gaps = 1/295 (0%)
Query: 2 NALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNA 61
AL R + AA + + + + L P R ++V + +DDGT+ + G+R QHD+
Sbjct: 19 TALETARRQLQAAAEHVDIADGVIERLTHPTRVVQVSVPVERDDGTVTVYDGYRAQHDDV 78
Query: 62 RGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLT 121
RGP KGG+RYHP V +E L+ MTWK AV ++P+GGAKGG+ +P LS E ERLT
Sbjct: 79 RGPYKGGLRYHPGVSAEECVGLSMWMTWKCAVMDLPFGGAKGGVVVDPKTLSADEHERLT 138
Query: 122 RVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHS-PAVVTGKPIDLGGSLG 180
R F ++ D +G D+PAPDMGT QTMAW +D YS G + P VVTGKP GGS G
Sbjct: 139 RRFAAELRDEVGPSQDIPAPDMGTDAQTMAWFMDAYSMQQGETVPGVVTGKPPVAGGSHG 198
Query: 181 RDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISG 240
R A GR V A +N + I +QG+G+VG+ AA L+ + G ++VAVSD++G
Sbjct: 199 RAEAPGRSVAIATREAINYYDIPIDDATVAVQGYGSVGANAALLLDDWGARVVAVSDVNG 258
Query: 241 AIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
+ ++ G+D ++ H + V +++ + +L D DV+IPAA+G VI
Sbjct: 259 GVLDTDGLDTHAIPSHGNQPAAVMRHDAPNTLTNEELLELDVDVVIPAAVGNVIT 313
>sp|Q56304|DHE3_THELI Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3
Length = 419
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 176/291 (60%), Gaps = 4/291 (1%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDG++ F GFR+Q++ ARGP KGG
Sbjct: 12 KQLERAAQYMDISEEALEFLKRPQRIVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HPE V ALA MTWKTAV ++PYGG KGG+ CNP ++S E ERL R + + I
Sbjct: 72 IRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGVICNPKEMSDREKERLARGYVRAI 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEY---SKFHGHSPAVVTGKPIDLGGSLGRDAAT 185
+D+I + D+PAPD+ T PQ MAW++DEY S+ S V+TGKP +GG + R AT
Sbjct: 132 YDVISPYTDIPAPDVYTNPQIMAWMMDEYETISRRKDPSFGVITGKPPSVGGIVARMDAT 191
Query: 186 GRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGG-KIVAVSDISGAIKN 244
RG + + G ++ G+ IQG+GN G + A+++ E+ G K+VAVSD G I N
Sbjct: 192 ARGASYTVREAAKALGMDLKGKTIAIQGYGNAGYYMAKIMSEEYGMKVVAVSDTKGGIYN 251
Query: 245 SKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
G++ +L K+ VK F G +I + +L + DVL P+A+ VI
Sbjct: 252 PDGLNADEVLAWKKKTGSVKDFPGATNITNEELLELEVDVLAPSAIEEVIT 302
>sp|P50735|GUDB_BACSU Cryptic catabolic NAD-specific glutamate dehydrogenase GudB
OS=Bacillus subtilis (strain 168) GN=gudB PE=1 SV=2
Length = 427
Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 179/294 (60%), Gaps = 5/294 (1%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
++ L +T A LG ++ + L P R + V+ + DDG++ F G+R QH++
Sbjct: 15 LDVLKSTQTVIHKALEKLGYPEEVYELLKEPMRLLTVKIPVRMDDGSVKIFTGYRAQHND 74
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTW---KTAVANIPYGGAKGGIGCNPVDLSISEL 117
+ GP KGGIR+HP V EV A+ L W K + ++PYGG KGGI C+P D+S EL
Sbjct: 75 SVGPTKGGIRFHPNVTEKEVKAVKALSIWMSLKCGIIDLPYGGGKGGIVCDPRDMSFREL 134
Query: 118 ERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLG 176
ERL+R + + I ++G DVPAPD+ T Q MAW++DEYS+ +SP +TGKP+ LG
Sbjct: 135 ERLSRGYVRAISQIVGPTKDVPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGKPLVLG 194
Query: 177 GSLGRDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVS 236
GS GR++AT +GV ++ + G +I G R V+QGFGN GS+ A+ + + G K+V +S
Sbjct: 195 GSHGRESATAKGVTICIKEAAKKRGIDIKGARVVVQGFGNAGSYLAKFMHDAGAKVVGIS 254
Query: 237 DISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAAL 290
D G + + +G+D+ LL ++ G D+I + +L DCD+L+PAA+
Sbjct: 255 DAYGGLYDPEGLDIDYLLDR-RDSFGTVTKLFNDTITNQELLELDCDILVPAAI 307
>sp|P54386|DHE4_SYNY3 NADP-specific glutamate dehydrogenase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=gdhA PE=3 SV=1
Length = 428
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 174/298 (58%), Gaps = 10/298 (3%)
Query: 8 NRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKG 67
++ + A + + + + L P + V + DDG+L F G+R+++D+ RGP KG
Sbjct: 10 SKRLEKALKYVAISDDAGERLKYPKTSLSVSIPVRMDDGSLKIFPGYRVRYDDTRGPGKG 69
Query: 68 GIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQK 127
G+RYHP V DEV +LA MT+K A+ N+P+GGAKGGI NP +LS +ELERL+R + +
Sbjct: 70 GVRYHPNVTMDEVQSLAFWMTFKCALLNLPFGGAKGGITLNPKELSRAELERLSRGYIEA 129
Query: 128 IHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH-SPAVVTGKPIDLGGSLGRDAATG 186
I D IG D+ APD+ T M W++D+YS SPAVVTGKP+ +GGS GR+ ATG
Sbjct: 130 IADFIGPDIDILAPDVYTNEMMMGWMMDQYSIIRRKISPAVVTGKPVTMGGSQGRNTATG 189
Query: 187 RGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSK 246
G + M+ +L + + +QGFGN G A + + G K+VA+SD G I N +
Sbjct: 190 TGAFYIMQGMLPKFDQYPENTTVAVQGFGNAGMVVAECLYQDGYKVVAISDSQGGIYNEQ 249
Query: 247 GIDVPSLLKHVKEHRGVKG---------FSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
GID+P+++ + + HR + G I + +L D DVLIPAAL I
Sbjct: 250 GIDIPAVIDYKQRHRTLAGMYCDQAICDLGENQQISNAELLALDVDVLIPAALENQIT 307
>sp|Q9YC65|DHE3_AERPE Glutamate dehydrogenase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=gdhA PE=3
SV=2
Length = 418
Score = 228 bits (580), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 174/287 (60%), Gaps = 1/287 (0%)
Query: 10 NFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGI 69
+ A LLG D + + L P R ++V TI DDGT+ +F+G+R QH++A GP KGG+
Sbjct: 13 QLRRAVDLLGYDDYVYEVLANPDRVLQVRVTIKMDDGTVKTFLGWRSQHNSALGPYKGGV 72
Query: 70 RYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIH 129
RYHP V +EV AL+ MTWK ++A +PYGG KGG+ NP LS ELE L+R + + I
Sbjct: 73 RYHPNVTMNEVIALSMWMTWKNSLAGLPYGGGKGGVRVNPKILSPRELELLSRKYFESIS 132
Query: 130 DLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGRDAATGRG 188
D++G+ D+PAPD+ T PQ M+W LDEY++ G VVTGKP++LGG R +TG G
Sbjct: 133 DIVGVDQDIPAPDVYTDPQVMSWFLDEYNRVKRGQFFGVVTGKPVELGGLNARIVSTGYG 192
Query: 189 VLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGI 248
V + + + G+ +QG+GNVG +AA+ + E G KIVAVSD G I + +GI
Sbjct: 193 VAVSTRVAAEKFLGGLEGRTVAVQGYGNVGYYAAKFLAEMGAKIVAVSDSRGGIYDPEGI 252
Query: 249 DVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
D LK + V + G I + IL D+L+PAA+ VI
Sbjct: 253 DPEEALKVKRSTGTVANYQRGKKISTMEILELPVDILVPAAIEEVIT 299
>sp|O59650|DHE3_PYRKO Glutamate dehydrogenase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gdhA PE=1 SV=4
Length = 421
Score = 218 bits (556), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 172/293 (58%), Gaps = 6/293 (2%)
Query: 9 RNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGG 68
+ + AA+ + + + + L P R ++V + DDG++ F GFR+QH+ ARGP KGG
Sbjct: 12 QQLERAAQFMDISEEALEWLKRPMRIVEVSVPVEMDDGSVKVFTGFRVQHNWARGPTKGG 71
Query: 69 IRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI 128
IR+HP V ALA MTWK AV ++PYGG KGGI +P LS E ERL R + + +
Sbjct: 72 IRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVDPKKLSEREQERLARSYIRAV 131
Query: 129 HDLIGIHADVPAPDMGTGPQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGRDAAT 185
+D+IG D+PAPD+ T P+ MAW++DEY + G + V+TGKP +GG + R AT
Sbjct: 132 YDVIGPWTDIPAPDVYTNPKIMAWMMDEYETIMRRKGPAFGVITGKPPGVGGIVARMDAT 191
Query: 186 GRGVLFAMEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIK 243
RG F + G ++ G+ IQG+GN G + +++ E+ G K+VAVSD G I
Sbjct: 192 ARGAAFTIREAAKALGWDDLKGKTIAIQGYGNAGYYLHKIMSEEFGMKVVAVSDSKGGIY 251
Query: 244 NSKGI-DVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
N G+ +LK KEH VK G +I + +L + D+L P+A+ GVI
Sbjct: 252 NPDGLPPADEVLKWKKEHGSVKDMPGTQNITNEELLELEVDILAPSAIEGVIT 304
>sp|Q54KB7|DHE3_DICDI Glutamate dehydrogenase, mitochondrial OS=Dictyostelium discoideum
GN=gluD PE=1 SV=1
Length = 502
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 166/270 (61%), Gaps = 14/270 (5%)
Query: 35 IKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
++VE I + G + G+R QH + R P KGGIR+ EVD EV ALA LMT+K AV
Sbjct: 71 LRVEFPIKNEHGDVDIIAGYRAQHSHHRLPCKGGIRFSEEVDLQEVMALASLMTYKCAVV 130
Query: 95 NIPYGGAKGGIGCNPVDLSISELERLTRVFTQKI--HDLIGIHADVPAPDMGTGPQTMAW 152
++P+GGAKGG+ +P ++++ E++TR +T + + IG DVPAPDMGTG Q MAW
Sbjct: 131 DVPFGGAKGGVRIDPKKYTVAQREKITRAYTLLLCQKNFIGPGVDVPAPDMGTGEQEMAW 190
Query: 153 ILDEYSKFHGH---SPAVVTGKPIDLGGSLGRDAATGRGVLF------AMEALLNEHGKN 203
I D Y F+ + S A VTGKPI GG GR ATG GV + + E +L + G
Sbjct: 191 IRDTYQAFNTNDVDSMACVTGKPISSGGIRGRTEATGLGVFYGIREFLSYEEVLKKTGLT 250
Query: 204 --IAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHR 261
I G+ VIQGFGNVG +AA+ + G K++AV++ +GA+ N+ G+++ +L K+ +H
Sbjct: 251 PGIKGKSIVIQGFGNVGYFAAKFFEQAGAKVIAVAEHNGAVYNADGLNIDALNKYKLQHG 310
Query: 262 GVKGFSGGDSI-DSNSILIEDCDVLIPAAL 290
F G +I DS L CD+LIPAAL
Sbjct: 311 TFIDFPGATNIVDSVKALEIPCDILIPAAL 340
>sp|P28997|DHE2_PEPAS NAD-specific glutamate dehydrogenase OS=Peptostreptococcus
asaccharolyticus PE=1 SV=1
Length = 421
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 173/302 (57%), Gaps = 7/302 (2%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
+N LVA ++A LG D + + L P R I++ + DDGT+ F G+R H +
Sbjct: 5 LNPLVAAQEKVRIACEKLGCDPAVYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSS 64
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
A GP KGG+R+HP V+ DEV AL+ MT+K +PYGG KGGI +P +LS ELE+L
Sbjct: 65 AVGPSKGGVRFHPNVNMDEVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQL 124
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAV--VTGKPIDLGGS 178
+R + + ++ +G D+PAPD+ T Q M+W +DEY K +G + TGKP+ GGS
Sbjct: 125 SRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGS 184
Query: 179 LGRDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDI 238
GR+ ATG GV + G + + +QGFGNVG++ + I +GGK+ A+++
Sbjct: 185 EGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEW 244
Query: 239 -----SGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGV 293
+ A+ N GID LL + + ++ + GF G + I ++ D+++PAAL V
Sbjct: 245 DRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENV 304
Query: 294 IN 295
I
Sbjct: 305 IT 306
>sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondrial OS=Pongo pygmaeus GN=GLUD2
PE=3 SV=1
Length = 558
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNE--HGKNI------AG 206
GH + A VTGKPI GG GR +ATGRGV +E +NE + N+
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSNVGMTPGFGD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K VAV + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFRLQHGSILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKAKPYE-GSILEADCDILIPAA 383
>sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clostridium difficile
GN=gluD PE=3 SV=1
Length = 421
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 173/301 (57%), Gaps = 6/301 (1%)
Query: 1 MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDN 60
+N K A LG++ + + L P R I+V + DDG++ +F GFR QH++
Sbjct: 6 VNVFEMAQSQVKNACDKLGMEPAVYELLKEPMRVIEVSIPVKMDDGSIKTFKGFRSQHND 65
Query: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERL 120
A GP KGGIR+H V DEV AL+ MT+K +V IPYGG KGGI +P LS ELERL
Sbjct: 66 AVGPTKGGIRFHQNVSRDEVKALSIWMTFKCSVTGIPYGGGKGGIIVDPSTLSQGELERL 125
Query: 121 TRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSL 179
+R + I+ LIG DVPAPD+ T Q M+W++DEY+K G S V+TGKP++ GGSL
Sbjct: 126 SRGYIDGIYKLIGEKVDVPAPDVNTNGQIMSWMVDEYNKLTGQSSIGVITGKPVEFGGSL 185
Query: 180 GRDAATGRGVLFAMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDI- 238
GR AATG GV + G ++ + +QG GNVGS+ + GG +VA+++
Sbjct: 186 GRTAATGFGVAVTAREAAAKLGIDMKKAKIAVQGIGNVGSYTVLNCEKLGGTVVAMAEWC 245
Query: 239 ----SGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 294
S AI N G+D ++L ++KEH + F G I D D++IPAAL I
Sbjct: 246 KSEGSYAIYNENGLDGQAMLDYMKEHGNLLNFPGAKRISLEEFWASDVDIVIPAALENSI 305
Query: 295 N 295
Sbjct: 306 T 306
>sp|P54385|DHE3_DROME Glutamate dehydrogenase, mitochondrial OS=Drosophila melanogaster
GN=Gdh PE=1 SV=2
Length = 562
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 159/276 (57%), Gaps = 16/276 (5%)
Query: 35 IKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
I++ + +D G G+R QH + P KGGIR+ +V DEV AL+ LMT+K A
Sbjct: 107 IEIAFPLRRDAGNYEMITGYRAQHSTHKTPTKGGIRFSLDVSRDEVKALSALMTFKCACV 166
Query: 95 NIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAW 152
++P+GGAK G+ NP + S ELE++TR FT ++ IG DVPAPDMGTG + M+W
Sbjct: 167 DVPFGGAKAGLKINPKEYSEHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSW 226
Query: 153 ILDEYSKFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNE--HGKNI-- 204
I D Y+K GH + A VTGKPI+ GG GR +ATGRGV +E +NE + I
Sbjct: 227 IADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRGVFHGLENFINEANYMSQIGT 286
Query: 205 ----AGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVK-E 259
G+ F++QGFGNVG R + G + V + G + N +GID P LL+ K E
Sbjct: 287 TPGWGGKTFIVQGFGNVGLHTTRYLTRAGATCIGVIEHDGTLYNPEGID-PKLLEDYKNE 345
Query: 260 HRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVIN 295
H + G+ + +++ E CD+ IPAA+ VI
Sbjct: 346 HGTIVGYQNAKPYEGENLMFEKCDIFIPAAVEKVIT 381
>sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondrial OS=Gorilla gorilla gorilla
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFRD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K +AV + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFRLQHGSILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKAKPYE-GSILEVDCDILIPAA 383
>sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondrial OS=Homo sapiens GN=GLUD2
PE=1 SV=2
Length = 558
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFRD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K +AV + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKAKPYE-GSILEVDCDILIPAA 383
>sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondrial OS=Hylobates lar GN=GLUD2
PE=3 SV=1
Length = 555
Score = 204 bits (518), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 119 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDVPFGG 178
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 179 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIADTYA 238
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 239 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGD 298
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K +AV + G+I N GID L +H + GF
Sbjct: 299 KTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILGF 358
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 359 PKAKPYE-GSILEADCDILIPAA 380
>sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondrial OS=Homo sapiens GN=GLUD1
PE=1 SV=2
Length = 558
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K +AV + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKAKPYE-GSILEADCDILIPAA 383
>sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondrial OS=Pan troglodytes
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFRD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K +AV + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFRLQHGSLLGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKAKPYE-GSILEIDCDILIPAA 383
>sp|P82264|DHE3_CHAAC Glutamate dehydrogenase, mitochondrial OS=Chaenocephalus aceratus
GN=glud1 PE=1 SV=1
Length = 504
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 154/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +D+G G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 68 IKRDNGEWEVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAVVDVPFGG 127
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ N + S +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 128 AKAGVRINTKNYSDNELEKITRRFTIELAKKGFIGPGIDVPAPDMSTGEREMSWIADTYA 187
Query: 159 KFHGHSP----AVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK--------NIAG 206
H+ A VTGKPI GG GR +ATGRGV +E +NE +
Sbjct: 188 NTIAHTDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFMNEASYMSMVGLTPGVQD 247
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FVIQGFGNVG + R + G K V + +I GAI N+ GID +L ++ ++ + GF
Sbjct: 248 KTFVIQGFGNVGLHSMRYLHRFGAKCVGIGEIDGAIYNADGIDPKALEEYKLQNGTIVGF 307
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
G + SIL DCD+LIPAA
Sbjct: 308 PGAKPYEG-SILEADCDILIPAA 329
>sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial OS=Bos taurus GN=GLUD1
PE=1 SV=2
Length = 558
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 153/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K + V + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
I SIL DCD+LIPAA
Sbjct: 362 PKA-KIYEGSILEVDCDILIPAA 383
>sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus
GN=Glud1 PE=1 SV=2
Length = 558
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 151/263 (57%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK--------NIAG 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGLGD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K V V + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELEDFKLQHGSILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKA-KVYEGSILEADCDILIPAA 383
>sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus GN=Glud1
PE=1 SV=1
Length = 558
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 153/263 (58%), Gaps = 15/263 (5%)
Query: 41 IPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGG 100
I +DDG+ G+R QH R P KGGIRY +V DEV ALA LMT+K AV ++P+GG
Sbjct: 122 IRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGG 181
Query: 101 AKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAWILDEYS 158
AK G+ NP + + +ELE++TR FT ++ IG DVPAPDM TG + M+WI D Y+
Sbjct: 182 AKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTYA 241
Query: 159 KFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHGK-NIAG------- 206
GH + A VTGKPI GG GR +ATGRGV +E +NE +I G
Sbjct: 242 STIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGD 301
Query: 207 QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGF 266
+ FV+QGFGNVG + R + G K V V + G+I N GID L +H + GF
Sbjct: 302 KTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELEDFKLQHGSILGF 361
Query: 267 SGGDSIDSNSILIEDCDVLIPAA 289
+ SIL DCD+LIPAA
Sbjct: 362 PKA-KVYEGSILEADCDILIPAA 383
>sp|P00368|DHE3_CHICK Glutamate dehydrogenase 1, mitochondrial OS=Gallus gallus GN=GLUD1
PE=1 SV=1
Length = 503
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 152/269 (56%), Gaps = 15/269 (5%)
Query: 35 IKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94
+ V I +DDG G+R QH + R P KGGIRY +V DEV ALA LMT+K AV
Sbjct: 62 LSVSFPIKRDDGZWEVIEGYRAQHSHQRTPCKGGIRYSLDVSVDEVKALASLMTYKCAVV 121
Query: 95 NIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHD--LIGIHADVPAPDMGTGPQTMAW 152
++P+GGAK G+ NP + + +LE++TR FT ++ IG DVPAP+M TG + M+W
Sbjct: 122 DVPFGGAKAGVKINPKNYTDEDLEKITRRFTMELAKKGFIGPGVDVPAPNMSTGEREMSW 181
Query: 153 ILDEYSKFHGH----SPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALL-NEHGKNIAG- 206
I D Y+ GH + A VT I GG GR +ATGRG+ +E + N +I G
Sbjct: 182 IADTYASTIGHYDINAHACVTKPGISQGGIHGRISATGRGLFGHIENFIENASYMSILGM 241
Query: 207 ------QRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEH 260
+ F +QGFGNVG + R + G K VAV + G+I N GID L + +H
Sbjct: 242 TPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGEFDGSIWNPDGIDPKELEDYKLQH 301
Query: 261 RGVKGFSGGDSIDSNSILIEDCDVLIPAA 289
+ GF ++ SIL DCD+LIPAA
Sbjct: 302 GTIMGFPKAQKLEG-SILETDCDILIPAA 329
>sp|Q53199|DHE3_RHISN Probable glutamate dehydrogenase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01340 PE=3 SV=1
Length = 443
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 151/264 (57%), Gaps = 15/264 (5%)
Query: 46 GTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGI 105
G + SF+G+R ++ P+KG IRY D +EV ALA LMT K ++ ++P+GG+KG +
Sbjct: 31 GRMYSFIGWRSVREHCE-PVKGDIRYASNADAEEVEALAALMTLKCSLVDVPFGGSKGAL 89
Query: 106 GCNPVDLSISELERLTRVFTQKIHDLIG-IHADVPAPDMGTGPQTMAWILDEYSKFHG-- 162
+P + ELE +TR FTQ+++ D+GTG + MAW++DE+ + +
Sbjct: 90 KIDPRGWTPQELEHITRRFTQEMNKRPDRARRQCVGSDIGTGEREMAWMMDEFRRANPTD 149
Query: 163 --HSPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEH-------GKNIAGQRFVIQG 213
S A VTGKP+ GG GR +TGRGV FA+++ L + +N+ G VIQG
Sbjct: 150 VVTSGACVTGKPLSKGGIAGRAESTGRGVQFAIQSSLRDTRTPGLDGRRNLKGASTVIQG 209
Query: 214 FGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSI 272
FGNVG AAR + E+ ++ +++ G + N +G+ + +L +H + GF G SI
Sbjct: 210 FGNVGYHAARFLSEEDDARVTVLAERDGYVANPEGLSIEALKQHQIRTGSILGFDGAKSI 269
Query: 273 DSNSILIED-CDVLIPAALGGVIN 295
+ +E CDVLIPAA+ I+
Sbjct: 270 AGDMCGVEQPCDVLIPAAMENAIH 293
>sp|P95544|DHE4_PRERU NAD(P)-specific glutamate dehydrogenase OS=Prevotella ruminicola
GN=gdhA PE=1 SV=1
Length = 444
Score = 154 bits (390), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 152/282 (53%), Gaps = 9/282 (3%)
Query: 22 SKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVN 81
+ L + L +P R ++ + D+G + + +G+R+QH+NA GP KGG+R+H V+ +
Sbjct: 44 ANLIERLCVPDRILQFRVSWVDDNGNVQTNLGYRVQHNNAIGPYKGGLRFHKSVNASILK 103
Query: 82 ALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHDLIGIHADVPAP 141
LA T+K ++ +P GGAKGG +P S E+ R + F +++ LIG DVPA
Sbjct: 104 FLAFEQTFKNSLTTLPMGGAKGGSDFDPHGKSDMEVMRFCQAFMNELYRLIGPDEDVPAG 163
Query: 142 DMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHG 201
D+G G + + ++ +Y K ++TGK ++ GGSL R ATG G ++ +E +L G
Sbjct: 164 DIGVGGREVGYMFGQYKKLTHQFQGILTGKGLEFGGSLIRPEATGYGNVYFLEDMLKTRG 223
Query: 202 KNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL-----LKH 256
+++ G+ ++ G GNV + + + G K V SD +G I + GID L LK+
Sbjct: 224 ESLEGKTVLVSGSGNVAQYTIEKLLQLGAKPVTCSDSNGYIYDPDGIDAEKLAFIMELKN 283
Query: 257 VKEHRGVKGFS---GGDSIDSNSILIEDCDVLIPAALGGVIN 295
VK R +K ++ G +++ E D+ P A IN
Sbjct: 284 VKRGR-IKEYAEKYGVKYVENARPWGEKADIATPCATQDEIN 324
>sp|P94598|DHE3_BACTN Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=gdhA PE=3 SV=2
Length = 444
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 9/282 (3%)
Query: 22 SKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRYHPEVDPDEVN 81
+ L + L IP R + T D G + + +G+R+QH+NA GP KGGIR+H V+ +
Sbjct: 44 ANLIERLCIPDRVFQFRVTWMDDKGNIQTNMGYRVQHNNAIGPYKGGIRFHASVNLSILK 103
Query: 82 ALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHDLIGIHADVPAP 141
LA T+K ++ +P GG KGG +P S +E+ R + F ++ IG DVPA
Sbjct: 104 FLAFEQTFKNSLTTLPMGGGKGGSDFSPRGKSNAEVMRFVQAFMLELWRHIGPETDVPAG 163
Query: 142 DMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFAMEALLNEHG 201
D+G G + + ++ Y K TGK + GGSL R ATG G ++ + +L G
Sbjct: 164 DIGVGGREVGFMFGMYKKLAHEFTGTFTGKGREFGGSLIRPEATGYGNIYFLMEMLKTKG 223
Query: 202 KNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL-----LKH 256
++ G+ ++ G GNV + + E GGK+V SD G I + GID L LK+
Sbjct: 224 TDLKGKVCLVSGSGNVAQYTIEKVIELGGKVVTCSDSDGYIYDPDGIDREKLDYIMELKN 283
Query: 257 VKEHRGVKGFS---GGDSIDSNSILIEDCDVLIPAALGGVIN 295
+ R ++ ++ G ++ E CD+ +P+A +N
Sbjct: 284 LYRGR-IREYAEKYGCKYVEGAKPWGEKCDIALPSATQNELN 324
>sp|Q9ZKD8|DHE4_HELPJ NADP-specific glutamate dehydrogenase OS=Helicobacter pylori
(strain J99) GN=gdhA PE=3 SV=1
Length = 448
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 6/250 (2%)
Query: 17 LLGLDSKLEK-----SLLIPFREIKVECTIPKDDGTLASFVGFRIQHDNARGPMKGGIRY 71
LL D EK L+ P REI D+ + G R++ ++A GP KGG+R+
Sbjct: 34 LLDSDKSYEKHAVLERLIEPEREIFFRVCWLDDNHQIQVNRGCRVEFNSAIGPYKGGLRF 93
Query: 72 HPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPVDLSISELERLTRVFTQKIHDL 131
HP V+ + L K ++ + GGAKGG +P + S E+ R + F +++
Sbjct: 94 HPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKEKSEHEIMRFCQAFMNELYRH 153
Query: 132 IGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLF 191
IG DVPA D+G G + + ++ +Y K V+TGK + GGSL R ATG G ++
Sbjct: 154 IGATTDVPAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVY 213
Query: 192 AMEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVP 251
E +L E ++ G+ + G GNV + + + G K V SD +G I + GID+
Sbjct: 214 FAEEMLQERNSSLEGKVCSVSGSGNVAIYTIEKLLQIGAKPVTASDSNGMIYDKDGIDL- 272
Query: 252 SLLKHVKEHR 261
LLK +KE R
Sbjct: 273 ELLKEIKEAR 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,797,933
Number of Sequences: 539616
Number of extensions: 5635230
Number of successful extensions: 13992
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 13742
Number of HSP's gapped (non-prelim): 135
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)