Your job contains 1 sequence.
>036925
MGGWRNWYQELVNSKPLFLTIYTTVIVGIVFSSFYVFSAVYSPSSASANWFSSPPSISHS
PVAASSYINVAPNFSPTLKVSAIPPPLPQSSSKQVKPIWEVPQTKRLPSLKSFQLTKELV
EQRVQDNIIIMTFGNYAFMDFILNWVQRLTDLGLSNILVGALDTKLVKALYWKGVPVFDM
GSHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDA
DILTSSDQVVPTVVDDRLDIWQQVGAAYNVGIFHWRPTESAKKFAKEWKEMILADDKIWD
QNGFNELIRRQLGPSVSEDSELVYAYDGNLKLGVLPASIFCSGHTYFVQAMYKQLRLEPY
AVHTTFQYAGTEGKRHRLREAMVFYDPPEYYDTPGGFLSFKPFIPKSLLLDGKHDLESHF
ALVNYQMKQIRTALAIASVLNRTLVMPPLWCRLDRLWFPHPGVLEGTMTRQPFLCPLDHV
FEVNVMLQQLPEDEYGPGIGFREYSFMDNPSVPKQVKESRLEVQLCDDTLIDCQASSNTS
SPGILRFPRHSSEETFKTVFSSFKDVKVINFSSMKNAFLNFTDKTREERFRRRVKRYVGI
WCCVDSHTPGHIYYDMYWDEKPDWKPIPPQTPGDDHLPW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036925
(639 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2058769 - symbol:XEG113 "xyloglucanase 113" sp... 2448 2.9e-254 1
TAIR|locus:2026831 - symbol:RAY1 "REDUCED ARABINOSE YARIV... 187 3.3e-11 1
TAIR|locus:2156304 - symbol:AT5G44820 "AT5G44820" species... 149 2.3e-07 1
WB|WBGene00018275 - symbol:F41C3.11 species:6239 "Caenorh... 136 7.2e-06 1
TAIR|locus:2133457 - symbol:RGXT2 "rhamnogalacturonan xyl... 135 8.3e-06 1
TAIR|locus:2027605 - symbol:RGXT3 "RhamnoGalacturonan spe... 135 9.0e-06 1
TAIR|locus:2133392 - symbol:RGXT1 "rhamnogalacturonan xyl... 123 0.00017 1
TAIR|locus:2124968 - symbol:MGP4 "male gametophyte defect... 121 0.00028 1
TAIR|locus:2016487 - symbol:RRA3 "reduced residual arabin... 119 0.00062 1
>TAIR|locus:2058769 [details] [associations]
symbol:XEG113 "xyloglucanase 113" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=IMP] [GO:0052325 "cell wall pectin biosynthetic process"
evidence=IMP] [GO:0052636 "arabinosyltransferase activity"
evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR003388
GO:GO:0005783 GO:GO:0005794 EMBL:CP002685 GO:GO:0005768
GO:GO:0006486 GO:GO:0005802 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 GO:GO:0080147 GO:GO:0052636 GO:GO:0052325
PANTHER:PTHR10994 EMBL:AY074327 IPI:IPI00544266 RefSeq:NP_850250.1
UniGene:At.75202 ProteinModelPortal:Q8VXZ5 SMR:Q8VXZ5 PRIDE:Q8VXZ5
EnsemblPlants:AT2G35610.1 GeneID:818128 KEGG:ath:AT2G35610
TAIR:At2g35610 InParanoid:Q8VXZ5 OMA:SIFCSGH PhylomeDB:Q8VXZ5
ProtClustDB:CLSN2680053 Genevestigator:Q8VXZ5 Uniprot:Q8VXZ5
Length = 644
Score = 2448 (866.8 bits), Expect = 2.9e-254, P = 2.9e-254
Identities = 443/646 (68%), Positives = 523/646 (80%)
Query: 3 GWRNWYQELVNSKPLFLTIYTTVIVGIXXXXXXXXXXXXXXXXXXXXXXXXXXXISHSPV 62
GWRN +++ NSKPLF+TIY TVI+G+ +S P+
Sbjct: 4 GWRNGFRDATNSKPLFVTIYATVIIGVLVSSFYVFSAIYSPTNGSSSF------LSFPPL 57
Query: 63 AASSYINVAPNFSPTLKVSAIPPPLPQS---------SSKQVKPIW-EVPQTKRLPSLKS 112
+ S I+ P + TL++ PPP PQ+ + IW P+ K++P L++
Sbjct: 58 STSGRIHSLPQENATLELPVAPPPPPQALPPPVLEEAQGNSLGKIWVSPPRDKKMPPLET 117
Query: 113 FQLTKELVEQRVQDNIIIMTFGNYAFMDFILNWVQRLTDLGLSNILVGALDTKLVKALYW 172
F+LTKEL +RV+DN+II+TFGNYAFMDFIL WV+ LTDL LSNILVGA+DTKL++ALYW
Sbjct: 118 FKLTKELFGERVKDNVIIVTFGNYAFMDFILTWVKHLTDLDLSNILVGAMDTKLLEALYW 177
Query: 173 KGVPVFDMGSHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLP 232
KGVPVFDMGSHMST+DVGWGSPTFHKMGREK ILIDSVLPFG+ELLMCDTDMVWLKNP+P
Sbjct: 178 KGVPVFDMGSHMSTVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMP 237
Query: 233 YFARYPDADILTSSDQVVPTVVDDRLDIWQQVGAAYNVGIFHWRPTESAKKFAKEWKEMI 292
Y AR+PDAD+LTSSDQVVPTV+DD LDIWQQVGAAYN+GIFHWRPTESAKK AKEWKE++
Sbjct: 238 YLARFPDADVLTSSDQVVPTVIDDSLDIWQQVGAAYNIGIFHWRPTESAKKLAKEWKEIL 297
Query: 293 LADDKIWDQNGFNELIRRQLGPSVSEDSELVYAYDGNLKLGVLPASIFCSGHTYFVQAMY 352
LADDK+WDQNGFNE++RRQLGPSV DS L YAYDGNLK+G+LPASIFCSGHTYFVQAMY
Sbjct: 298 LADDKVWDQNGFNEIVRRQLGPSVEGDSGLFYAYDGNLKVGILPASIFCSGHTYFVQAMY 357
Query: 353 KQLRLEPYAVHTTFQYAGTEGKRHRLREAMVFYDPPEYYDTPGGFLSFKPFIPKSLLLDG 412
+QLRLEPYAVHTTFQYAGTEGKRHRLRE MVFYDPPEYYD+PGGF++FKP IPKSLLLDG
Sbjct: 358 QQLRLEPYAVHTTFQYAGTEGKRHRLREGMVFYDPPEYYDSPGGFIAFKPSIPKSLLLDG 417
Query: 413 KHDLESHFALVNYQMKQIRTALAIASVLNRTLVMPPLWCRLDRLWFPHPGVLEGTMTRQP 472
KH +ESHF LVN+QMKQIR+ALAIAS+LNRTLVMPP+WCRLDRLWF HPG L+G+MTRQP
Sbjct: 418 KHTIESHFILVNHQMKQIRSALAIASLLNRTLVMPPIWCRLDRLWFGHPGTLQGSMTRQP 477
Query: 473 FLCPLDHVFEVNVMLQQLPEDEYGPGIGFREYSFMDNPSVPKQVKESRLEVQLCDDTLID 532
F+CPLDHVFEVN+ML++LPE+E+GPGIG REYSF+DNP +PKQVKES L+VQLC +
Sbjct: 478 FICPLDHVFEVNIMLKELPEEEFGPGIGIREYSFLDNPLLPKQVKESWLDVQLCQEGKEG 537
Query: 533 CQASSNTSSPGILRFPRHSSEETFKTVFSSFKDVKVINFSSMKNAFLNXXXXXXXXXXXX 592
C+AS+NTS +L+FP+ S+E+TFK +FSSF DVKVI FSS+++AF+
Sbjct: 538 CEASNNTSPSRVLKFPKRSNEDTFKAIFSSFDDVKVIKFSSIEDAFIGFSDKEREERFRR 597
Query: 593 XXXXXXGIWCCVDSHTPGHIYYDMYWDEKPDWKPIPPQTPGDDHLP 638
GIWCC ++ TPGHIYYDMYWDEKP WKP+PPQTP +DH P
Sbjct: 598 RVKRYVGIWCCEENKTPGHIYYDMYWDEKPGWKPVPPQTPEEDHPP 643
>TAIR|locus:2026831 [details] [associations]
symbol:RAY1 "REDUCED ARABINOSE YARIV 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=IDA]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR003388
GO:GO:0005783 EMBL:CP002684 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 PANTHER:PTHR10994 IPI:IPI00540709 RefSeq:NP_177220.2
UniGene:At.50024 ProteinModelPortal:F4I6V0
EnsemblPlants:AT1G70630.1 GeneID:843400 KEGG:ath:AT1G70630
OMA:CHFGTKC Uniprot:F4I6V0
Length = 537
Score = 187 (70.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 50/183 (27%), Positives = 95/183 (51%)
Query: 79 KVSAIPPPLPQSSSKQVKPIWEVPQTKRLPSLK-SFQLTKELVEQRVQDNIIIMTFGNYA 137
K+SA + ++ S+ +K + V + + +P LK F L L ++ ++++ Y+
Sbjct: 228 KISAC---ITRTKSRSLKLDF-VQKDETVPPLKFPFDLESLLPLVADKNRTVVLSVAGYS 283
Query: 138 FMDFILNWVQRLTDLGLSNILVGALDTKLVKALYWKGVPVF-D--MGSHMSTMDVGWGSP 194
+ D +++WV RL L + N LV ALD + + +G+PVF D ++S D +GS
Sbjct: 284 YKDMLMSWVCRLRRLKVPNFLVCALDDETYQFSILQGLPVFFDPYAPKNISFNDCHFGSK 343
Query: 195 TFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDADILTSSDQVVPTVV 254
F ++ + K+ + +L G+ +L+ D D+ W +NPLP + + + SD+ T
Sbjct: 344 CFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWFRNPLPLLQSFGPSVLAAQSDEYNTTAP 403
Query: 255 DDR 257
+R
Sbjct: 404 INR 406
>TAIR|locus:2156304 [details] [associations]
symbol:AT5G44820 "AT5G44820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 HOGENOM:HOG000238616 EMBL:BT026026 IPI:IPI00527813
RefSeq:NP_199295.2 UniGene:At.30051 STRING:Q147R7 PRIDE:Q147R7
DNASU:834512 EnsemblPlants:AT5G44820.1 GeneID:834512
KEGG:ath:AT5G44820 TAIR:At5g44820 InParanoid:Q147R7 OMA:WYAARER
PhylomeDB:Q147R7 Genevestigator:Q147R7 Uniprot:Q147R7
Length = 367
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 70/263 (26%), Positives = 114/263 (43%)
Query: 73 NFSPTLKVSAIPPPL-PQSSSKQVKPIWEVPQTKRLPSLKSFQLTKELVEQR-VQDNIII 130
N S + A P PL P +S ++ P +T + P L SF KE++E ++N +I
Sbjct: 58 NVSNLTSLQASPSPLLPNLNSSEISP-----ETTK-PKL-SF---KEILENASTKNNTVI 107
Query: 131 MTFGNYAFMDFILNWVQRLTDLGLSNILVGALDTKLVK--ALYWKGVPVFDMGS------ 182
+T N A+ + L DL L + +G +L+K + + F+ S
Sbjct: 108 ITTLNQAWAE-----PNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIKAFERCSQLHTNC 162
Query: 183 -HMSTMDVG------WGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFA 235
H+ T + + +P + KM + L+ VL GF + D D++WL++P P
Sbjct: 163 YHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQVLEMGFNFIFTDADIMWLRDPFPRL- 221
Query: 236 RYPDADILTSSDQVVPTVVDDRLDIWQQVGAAYNVGIFHWRPTESAKKFAKEWKEMILAD 295
YPD D + D+ D D W N G + R + +F K W + L
Sbjct: 222 -YPDGDFQMACDRFFGNPYDS--DNW------VNGGFTYVRSNNRSIEFYKFWHKSRLDY 272
Query: 296 DKIWDQNGFNELIRRQLGPSVSE 318
+ DQ+ FN I+ + P +SE
Sbjct: 273 PDLHDQDVFNR-IKHE--PFISE 292
>WB|WBGene00018275 [details] [associations]
symbol:F41C3.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005069
Pfam:PF03407 EMBL:FO080693 PIR:T16314 RefSeq:NP_494844.3
ProteinModelPortal:Q20261 PaxDb:Q20261 EnsemblMetazoa:F41C3.11
GeneID:173816 KEGG:cel:CELE_F41C3.11 UCSC:F41C3.11 CTD:173816
WormBase:F41C3.11 eggNOG:NOG316769 HOGENOM:HOG000017439
InParanoid:Q20261 OMA:QWDETIK NextBio:881239 Uniprot:Q20261
Length = 389
Score = 136 (52.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 52/208 (25%), Positives = 86/208 (41%)
Query: 127 NIIIMTFGNYAFMDFILNWV--QRLTDLGLSNILVGALDTKLVKAL--YWKGVPVFDMGS 182
N I N A+ LNW+ L D + L+ ++D+ A+ W + +
Sbjct: 130 NFIYFAMINNAYERMTLNWICNTALMDNVHNRTLIVSMDSSTCAAIKSQWDET-IKCVSL 188
Query: 183 HMSTMDVG--WGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDA 240
++ T G WG + + +A L+D + ++ + D W K+PL FA +
Sbjct: 189 NIDTYKTGYEWGKQEYINILTLRANLMDLLATNNIPFVLIEADATWFKDPLELFANRTNT 248
Query: 241 DILTSSDQVVPTVVDDRLDIWQQVGAAYNVGIFHWRPTESAKKFAKEWKEMILADDKIWD 300
+ D +VP D W + A++ + T +K F KE KE + AD K++D
Sbjct: 249 E--EDFDIIVPVKGYDG-GSWDTM--AFDPMLVG--STNGSKMFIKEMKERLNADQKLYD 301
Query: 301 QNGFNELIRRQLGPSVSEDSELVYAYDG 328
Q+ N+L Q V E DG
Sbjct: 302 QDVMNQLCASQHNGLVCRQFEYNEVADG 329
>TAIR|locus:2133457 [details] [associations]
symbol:RGXT2 "rhamnogalacturonan xylosyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY065071
EMBL:BT002558 EMBL:BK005830 IPI:IPI00536959 PIR:T02000
RefSeq:NP_192084.1 UniGene:At.3842 ProteinModelPortal:Q9ZSJ0
IntAct:Q9ZSJ0 EnsemblPlants:AT4G01750.1 GeneID:827905
KEGG:ath:AT4G01750 TAIR:At4g01750 InParanoid:Q9ZSJ0 OMA:PDQNGET
PhylomeDB:Q9ZSJ0 Genevestigator:Q9ZSJ0 Uniprot:Q9ZSJ0
Length = 367
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 66/267 (24%), Positives = 107/267 (40%)
Query: 138 FMDFILNWVQRLT-DLGLSNILVGALD-TKLVKALY-WKGVPVFDMGSHMSTMDVGWGSP 194
F+ F+ NW+ ++ +LV A D L K W G V + S +GS
Sbjct: 110 FLPFLNNWLISVSRQKHQEKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAYSFGSQ 169
Query: 195 TFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDADILTSSDQVVPTVV 254
F + + +L G+ ++ D DMVWL++P Y DA Q+ P
Sbjct: 170 GFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFQYLEGSHDAYFTDDMPQIKPLNH 229
Query: 255 DDRLDIWQQVGAAYNVG-IFHWRPTESAKKFAKEWKEMILADDKIWDQNGFNELIRRQLG 313
L Q G Y + + RPT AK K+W E + + W +E IR +
Sbjct: 230 SHDLPAPDQNGETYICSCMIYLRPTNGAKLLMKKWSEEL--QSQAW-----SESIRFKAN 282
Query: 314 PSVSEDSEL-VYAYDGNLKLGVLPASIFCSGHTYFVQAMY-KQLRLEPYAVHTTFQYAGT 371
+ + L A+ +L L L F +G YF A + K+ + + VH + G
Sbjct: 283 DQPAFNLALNKTAHQVDLYL--LSQVAFPTGGLYFNDAAWVKETKGKHVIVHNNY-IIGY 339
Query: 372 EGKRHRLREAMVFYDPPEYYDTPGGFL 398
+ K R ++ ++ ++P G L
Sbjct: 340 DRKMRRFQDYGLWLVDDHALESPLGKL 366
>TAIR|locus:2027605 [details] [associations]
symbol:RGXT3 "RhamnoGalacturonan specific
Xylosyltransferase 3" species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0035252
"UDP-xylosyltransferase activity" evidence=IDA] InterPro:IPR003388
GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 GO:GO:0035252 EMBL:AC009323
PANTHER:PTHR10994 EMBL:BT005111 EMBL:AK117396 IPI:IPI00528206
PIR:B96607 RefSeq:NP_176048.1 UniGene:At.42755
ProteinModelPortal:Q9FXA7 PRIDE:Q9FXA7 EnsemblPlants:AT1G56550.1
GeneID:842108 KEGG:ath:AT1G56550 TAIR:At1g56550
HOGENOM:HOG000241399 InParanoid:Q9FXA7 KO:K11714 OMA:NETWVNE
PhylomeDB:Q9FXA7 ProtClustDB:CLSN2682897 Genevestigator:Q9FXA7
Uniprot:Q9FXA7
Length = 383
Score = 135 (52.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 73/346 (21%), Positives = 136/346 (39%)
Query: 74 FSPTLKVSAIPPPLPQSSSKQVKPIWEVPQTKRLPSLKSFQLTKELVEQRVQDNIIIMTF 133
F P K S P ++S + P + + + + L + V+ ++ +I+
Sbjct: 37 FLPLTKSSLFM--FPNTTSSSLSP----SSSLSVSDWRDYSLA-QAVKFVAKNETVIVCA 89
Query: 134 GNYAFMDFILNWVQRLT-DLGLSNILVGALD-TKLVKALY-WKGVPVFDMGSHMSTMDVG 190
+Y F+ F+ NW+ ++ +LV A D L K W G V +
Sbjct: 90 VSYPFLPFLNNWLISISRQKHQEKVLVIAEDYATLYKVNEKWPGHAVLIPPALDPQSAHK 149
Query: 191 WGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDADILTSSDQVV 250
+GS F + + + ++L G+ ++ D DMVWL++P Y DA + +
Sbjct: 150 FGSQGFFNLTSRRPQHLLNILELGYNVMYNDVDMVWLQDPFDYLQGSYDAYFMDDMIAIK 209
Query: 251 PTVVDDRLDIWQQVGAAYNVG-IFHWRPTESAKKFAKEWKEMILADDKIWDQNGFNELIR 309
P L + G Y + R T+ K K W E I A W+ + +
Sbjct: 210 PLNHSHDLPPLSRSGVTYVCSCMIFLRSTDGGKLLMKTWVEEIQAQP--WNNT---QAKK 264
Query: 310 RQLGPSVSEDSELVYAYDGNLKLGVLPASIFCSGHTYFVQAMY-KQLRLEPYAVHTTFQY 368
P+ + ++ +K+ +LP S F SG YF + + R + VH +
Sbjct: 265 PHDQPAFNR---ALHKTANQVKVYLLPQSAFPSGGLYFRNETWVNETRGKHVIVHNNY-I 320
Query: 369 AGTEGKRHRLREAMVFYDPPEYYDTPGGFLSFKPFIPKSLLLDGKH 414
G + K R ++ ++ ++P G L + ++ +GK+
Sbjct: 321 IGYDKKMKRFQDFSLWLVDDHALESPLGKLEI--YQEQNTTTEGKN 364
>TAIR|locus:2133392 [details] [associations]
symbol:RGXT1 "rhamnogalacturonan xylosyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY924810
EMBL:BK005829 IPI:IPI00542928 PIR:T01998 RefSeq:NP_192086.1
UniGene:At.50860 ProteinModelPortal:Q9ZSJ2 STRING:Q9ZSJ2
EnsemblPlants:AT4G01770.1 GeneID:828129 KEGG:ath:AT4G01770
TAIR:At4g01770 InParanoid:Q9ZSJ2 OMA:HSHDLPH PhylomeDB:Q9ZSJ2
Genevestigator:Q9ZSJ2 Uniprot:Q9ZSJ2
Length = 361
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 65/280 (23%), Positives = 113/280 (40%)
Query: 125 QDNIIIMTFGNYAFMDFILNWVQRLT-DLGLSNILVGALD-TKLVKALY-WKGVPVFDMG 181
++ +I+ + F+ F+ NW+ ++ +LV A D L K W G V
Sbjct: 91 KNGTVIVCAVSSPFLPFLNNWLISVSRQKHQDKVLVIAEDYITLYKVNEKWPGHAVLIPP 150
Query: 182 SHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDAD 241
+ S +GS F + + +L G+ ++ D DMVWL++P Y DA
Sbjct: 151 ALDSKTAFSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFLYLEGSHDAY 210
Query: 242 ILTSSDQVVPTVVDDRLDIWQQVGAAYNVG-IFHWRPTESAKKFAKEWKEMILADDKIWD 300
Q+ P L + G Y + + RPT AK K+W E + + W
Sbjct: 211 FTDDMPQIKPLNHSHDLPHPDRNGETYICSCMIYLRPTNGAKLLMKKWSEEL--QSQAW- 267
Query: 301 QNGFNELIRRQLGPSVSEDSEL-VYAYDGNLKLGVLPASIFCSGHTYFV-QAMYKQLRLE 358
+E IR + + + L A+ +L L L F +G YF +A ++ + +
Sbjct: 268 ----SESIRFKANDQPAFNLALNKTAHQVDLYL--LSQVAFPTGGLYFKNEAWVQETKGK 321
Query: 359 PYAVHTTFQYAGTEGKRHRLREAMVFYDPPEYYDTPGGFL 398
VH + G + K R ++ ++ ++P G L
Sbjct: 322 HVIVHNNY-IIGYDRKMKRFQDYGLWLVDDHALESPLGKL 360
>TAIR|locus:2124968 [details] [associations]
symbol:MGP4 "male gametophyte defective 4" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0042285 "xylosyltransferase activity" evidence=IDA] [GO:0048868
"pollen tube development" evidence=IMP] InterPro:IPR003388
GO:GO:0005783 GO:GO:0005794 EMBL:CP002687 CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 EMBL:AL161491 GO:GO:0048868
GO:GO:0042285 PANTHER:PTHR10994 GO:GO:0010306 HOGENOM:HOG000241399
KO:K11714 ProtClustDB:CLSN2682897 EMBL:BT033130 IPI:IPI00537987
PIR:A85016 RefSeq:NP_849279.1 UniGene:At.20197
ProteinModelPortal:Q9M146 PRIDE:Q9M146 EnsemblPlants:AT4G01220.1
GeneID:828028 KEGG:ath:AT4G01220 TAIR:At4g01220 InParanoid:Q9M146
OMA:KPLDHSH PhylomeDB:Q9M146 Genevestigator:Q9M146 Uniprot:Q9M146
Length = 360
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 54/220 (24%), Positives = 88/220 (40%)
Query: 97 PIWEVPQTKRLPSLKSFQ--LTKELVEQRVQDNIIIMTFGNYAFMDFILNWVQRLT-DLG 153
P++ P K PS ++ + V+ ++ +I+ +Y ++ F+ NW+ ++
Sbjct: 63 PLFPSPN-KLSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKH 121
Query: 154 LSNILVGALD-TKLVKALY-WKGVPVFDMGSHMSTMDVGWGSPTFHKMGREKAILIDSVL 211
+LV A D L K W G V + S +GS F + + +L
Sbjct: 122 QDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEIL 181
Query: 212 PFGFELLMCDTDMVWLKNPLPYFARYPDADILTSSDQVVPTVVDDRLDIWQQVGAAYNVG 271
G+ ++ D DMVWL++P Y DA + + P L + G Y
Sbjct: 182 ELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICS 241
Query: 272 -IFHWRPTESAKKFAKEWKEMILADD-----KIWDQNGFN 305
+ RPT AK K+W E + K DQ GFN
Sbjct: 242 CMIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFN 281
>TAIR|locus:2016487 [details] [associations]
symbol:RRA3 "reduced residual arabinose 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR003388 GO:GO:0005783
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005768
GO:GO:0016740 GO:GO:0005802 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 GO:GO:0080147 EMBL:AC025808 PANTHER:PTHR10994
ProtClustDB:CLSN2682481 EMBL:AY088117 EMBL:BT025990 EMBL:AK229032
IPI:IPI00530658 RefSeq:NP_564082.1 UniGene:At.28061
ProteinModelPortal:Q9LN62 STRING:Q9LN62 PaxDb:Q9LN62 PRIDE:Q9LN62
EnsemblPlants:AT1G19360.1 GeneID:838519 KEGG:ath:AT1G19360
TAIR:At1g19360 eggNOG:NOG318198 HOGENOM:HOG000012501
InParanoid:Q9LN62 OMA:EMLEMWF PhylomeDB:Q9LN62
Genevestigator:Q9LN62 Uniprot:Q9LN62
Length = 428
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 48/203 (23%), Positives = 87/203 (42%)
Query: 118 ELVEQRVQDNIIIMTFGNYAFMDFILNWVQRLTDLGLSNILVGALDTKLVKALYWKGVPV 177
+++E+ D +I+ N + + + +G++N LV ALD + V
Sbjct: 147 KILEEIAVDKEVIVALANANVKAMLEVQIASIKRVGITNYLVVALDDYIENLCKENDVAY 206
Query: 178 F--DMGSHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFA 235
+ D + T+ G+ H + K ++ L G+ +L+ D D+V+L+NP +
Sbjct: 207 YKRDPDKDVDTVGKTGGN---HAVSGLKFRVLREFLQLGYGVLLSDVDIVFLQNPFSHL- 262
Query: 236 RYPDADILTSSD-------QVVPTVVDDRLDIWQQVGAA-----YNVGIFHWRPTESAKK 283
Y D+D+ + SD V D+ W + +N G F+ RPT + +
Sbjct: 263 -YRDSDVESMSDGHDNHTAYGFNDVFDEPAMGWARYAHTMRIWVFNSGFFYLRPTIPSIE 321
Query: 284 FAKEWKEMILADDKIWDQNGFNE 306
+ L+ K+WDQ FNE
Sbjct: 322 LLDRVADR-LSKAKVWDQAVFNE 343
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 639 594 0.00084 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 627 (67 KB)
Total size of DFA: 378 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 49.10u 0.09s 49.19t Elapsed: 00:00:26
Total cpu time: 49.10u 0.09s 49.19t Elapsed: 00:00:28
Start: Fri May 10 12:01:29 2013 End: Fri May 10 12:01:57 2013