BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036925
(639 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54RP0|AGTA_DICDI UDP-galactose:fucoside alpha-3-galactosyltransferase
OS=Dictyostelium discoideum GN=agtA PE=1 SV=1
Length = 648
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 191 WGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDADILTSSDQVV 250
+G F + EK +++ VL G+ +L DTD+VW ++P +F Y D +Q
Sbjct: 102 YGDIGFRAICNEKPLVVLDVLKKGYNVLWTDTDIVWKRDPFIHF--YQDI------NQEN 153
Query: 251 PTVVDDRLDIW-QQVGAAYNVGIFHWRPTESAKKFAKEWKEMI--LADDKI-----WDQN 302
DD +D++ QQ G + R + KF ++ + DD+I
Sbjct: 154 QFTNDDDIDLYVQQDDDDICAGFYFIRSNQRTIKFIQDSINFLNPCIDDQIAMRLFLKSQ 213
Query: 303 GFNELIRRQLGPSVSEDSELVYAYDGNLKLGVLPASIFCSGHTYFVQAMYKQLRLEPYAV 362
G N + + + S+SE+ + ++ +L +F +G YF + ++ + P+ +
Sbjct: 214 GIN-IKSKNILLSLSENDK-----KDKIRYRLLDKKLFPNGTNYFNLKITQRDNITPFII 267
Query: 363 HTTFQYAGTEGKRHRLREAMVFY 385
H G K+ R E ++Y
Sbjct: 268 HNNC-IIGHRSKKDRFIEYGLWY 289
>sp|O06484|YFNF_BACSU Uncharacterized protein YfnF OS=Bacillus subtilis (strain 168)
GN=yfnF PE=4 SV=1
Length = 303
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 203 KAILIDSVLPFGFEL---LMCDTDMVWLKNPLPYFARYPDADILTS-SDQVVPTVVDDRL 258
K I + +VL EL D D+ + +P P F PD +L S D V+P+ +++
Sbjct: 84 KPIFLQAVLNSNPELERVTYIDGDLFFYADPSPIFENQPDCSVLLSRGDIVIPSFEKEQI 143
Query: 259 DIWQQVGAAYNVGIFHWRPTESAKKFAKEWKEMILADDK 297
D+ Q++ YN G ++ ++ + WKE L + K
Sbjct: 144 DMLQRLLGRYNSGFISFKHDDAGTDCLEWWKERCLEECK 182
>sp|Q3E6Y3|Y1869_ARATH Uncharacterized protein At1g28695 OS=Arabidopsis thaliana
GN=At1g28695 PE=2 SV=1
Length = 329
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 193 SPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARYPDADILTSSDQVVPT 252
S F +M + LI VL G+ ++ DTD++WL++PL D I
Sbjct: 139 SKDFIEMMWRRTRLILDVLRRGYNVIFTDTDVMWLRSPLSRLNMSLDMQISV-------- 190
Query: 253 VVDDRLDIWQQVGAAYNVGIFHWRPTESAKKFAKEWKEMILADDKIWDQNGFNELIR--- 309
DR+++ Q+ N G +H R ++W +M L + +Q+ L+
Sbjct: 191 ---DRINVGGQL---INTGFYHVRSNNKTISLFQKWYDMRLNSTGMKEQDVLKNLLDSGF 244
Query: 310 -RQLGPSVS 317
QLG +V
Sbjct: 245 FNQLGLNVG 253
>sp|Q6CZU4|KEFG_ERWCT Glutathione-regulated potassium-efflux system ancillary protein
KefG OS=Erwinia carotovora subsp. atroseptica (strain
SCRI 1043 / ATCC BAA-672) GN=kefG PE=3 SV=1
Length = 183
Score = 36.2 bits (82), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 121 EQRVQDNIIIM---TFGNYAFMDFILNWVQRLTDLGLSNILVGALDTKLVKALYWKGVPV 177
+Q ++++ II+ F Y+ + W+ R+ G +N + G + YW+ V
Sbjct: 55 QQLLREHQIIVFQHPFYTYSCPALLKEWLDRVLSRGFANGIGG----NALAGKYWRSV-- 108
Query: 178 FDMGSHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARY 237
+ G +H G + + D + PF MC M W++ + Y+AR
Sbjct: 109 ---------ITTGEPEDAYHADGNNRYPMDDLLRPFELTAAMCR--MHWMRPMIVYWARR 157
Query: 238 PDADILTSS 246
D+L+S
Sbjct: 158 LQPDVLSSQ 166
>sp|P07256|QCR1_YEAST Cytochrome b-c1 complex subunit 1, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COR1 PE=1
SV=1
Length = 457
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 24 TVIVGIVFSSFYVFSAVYSPSSASANWFSSPPSISHSPVAASSYINVAPNFSPTLKVSAI 83
T VG+VF S Y+ + S W + S +S VAA + ++ N S + S I
Sbjct: 48 TASVGVVFGSGAANENPYN-NGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQ-SYI 105
Query: 84 PPPLPQSSSKQVKPIWE--VPQTKRLPSLKSFQLTKELVEQRVQD-------NIIIMTFG 134
LP S+ K + + + + Q L S +F+ TK+ V ++VQD N ++
Sbjct: 106 VSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLH 165
Query: 135 NYAFMDFILNWVQRLTDLGLSNILVGALDT 164
+ AF + L+ R T L N++V L++
Sbjct: 166 STAFQNTPLSLPTRGTLESLENLVVADLES 195
>sp|Q90592|GTR2_CHICK Solute carrier family 2, facilitated glucose transporter member 2
OS=Gallus gallus GN=SLC2A2 PE=2 SV=1
Length = 533
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 167 VKALYWK-GVPVFDMGSHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDM 224
+ +YW V +F +G +S+ VGW ++GR KA+L+ +VL LLM M
Sbjct: 104 ILTMYWSLSVSMFAVGGMVSSFTVGW---IGDRLGRVKAMLVVNVLSIAGNLLMGLAKM 159
>sp|C6DG98|KEFG_PECCP Glutathione-regulated potassium-efflux system ancillary protein
KefG OS=Pectobacterium carotovorum subsp. carotovorum
(strain PC1) GN=kefG PE=3 SV=1
Length = 183
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 20/129 (15%)
Query: 121 EQRVQDNIIIM---TFGNYAFMDFILNWVQRLTDLGLSNILVGALDTKLVKALYWKGVPV 177
+Q ++++ +I+ F Y+ + W+ R+ G +N + G + YW+ V
Sbjct: 55 QQLLREHQVIVFQHPFYTYSCPALLKEWLDRVLSRGFANGIGG----NALAGKYWRSV-- 108
Query: 178 FDMGSHMSTMDVGWGSPTFHKMGREKAILIDSVLPFGFELLMCDTDMVWLKNPLPYFARY 237
+ G +H G + + D + PF MC M W+ + Y+AR
Sbjct: 109 ---------ITTGEPEDAYHPDGNNRYPMEDLLRPFELTAAMCR--MHWMHPMIVYWARR 157
Query: 238 PDADILTSS 246
D+L+S
Sbjct: 158 LQPDVLSSQ 166
>sp|Q6WG24|IL4RA_HORSE Interleukin-4 receptor subunit alpha OS=Equus caballus GN=IL4R PE=2
SV=2
Length = 809
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 20/144 (13%)
Query: 4 WRNWYQELVNSK-PLFLTIYTTVIVGIVFSSFYVFSAVYSPSSASANWFSSPPSISHSPV 62
W N+Y++ + + PL ++I VI+ I S ++ + W+ P+ +HSP+
Sbjct: 220 WHNYYEQPLEQRLPLGVSISCVVILAICLSCYFSIIKI------KKEWWDQIPNPAHSPL 273
Query: 63 AASSYINVAPNFSPTLKVSAIPPPLPQSSSKQVK--PIWEVPQTKRLPSLKSFQLTKELV 120
A L+ S + QS ++ P W+ TK LP L L KE
Sbjct: 274 VAI-----------VLQDSQVSLWGKQSRGQEPAKCPRWKTCLTKLLPCLLEHGLQKEED 322
Query: 121 EQRVQDNIIIMTFGNYAFMDFILN 144
+ N + G A+ +N
Sbjct: 323 SSKTVRNGPFQSPGKSAWHTVEVN 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,134,620
Number of Sequences: 539616
Number of extensions: 11169580
Number of successful extensions: 26033
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 26009
Number of HSP's gapped (non-prelim): 40
length of query: 639
length of database: 191,569,459
effective HSP length: 124
effective length of query: 515
effective length of database: 124,657,075
effective search space: 64198393625
effective search space used: 64198393625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)