BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036938
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 26 TVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVP-KASYDGC 84
TVH+VGD+ GWS+P+S Y+ WAA K F VGD L FNF N H+V + K S+D C
Sbjct: 3 TVHIVGDNTGWSVPSS--PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC 60
Query: 85 TSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131
N + T P LD G HY++CT G HC GQKL+I V A
Sbjct: 61 NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 107
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 30 VGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNP 89
VGD W+ P Y WA K F VGD L F+F HDV V +A+++ C P
Sbjct: 27 VGDDTEWTRPMD--PEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 90 IGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITVSATPGPSPSPTGNPTPPTTT 149
I + +T P I L++ G Y+ICT G HC+ GQKL+ITV A TG TP
Sbjct: 85 ISH-MTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAA-----GATGGATPGAGA 138
Query: 150 TPTAPSPNSGTPDDCTPAPTSGPTAGGPAGSTTPSNNNPSAIPDSSSSLVLASILAPMLA 209
TP AP T P T G +G+TTP+ N ++SSL A+ L ++
Sbjct: 139 TP-APGSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGN-------AASSLGGATFLVAFVS 190
Query: 210 IVV 212
VV
Sbjct: 191 AVV 193
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 30 VGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNP 89
VG M W P+ Y WA K F VGD L F+F HDV V K ++D C NP
Sbjct: 5 VGGDMEWKRPSD--PKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62
Query: 90 IGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITV 129
I + +TT P I L++ G YYICT G HC+ GQKL+I V
Sbjct: 63 ISH-MTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 12 VIAVALLMECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEH 71
+ ++ L AAA V V G S W IP S + ++ WA F VGD + F + + +
Sbjct: 16 IFSLIFLFSLAAANEVTVGGKSGDWKIPPSS-SYSFTEWAQKARFKVGDFIVFRYESGKD 74
Query: 72 DVLRVPKASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131
VL V K +Y+ C ++NP+ N T G + LD +G Y+I HC+ GQKL++ V +
Sbjct: 75 SVLEVTKEAYNSCNTTNPLAN-YTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 133
Query: 132 TPGPSPSPTGNPTPPTTTTPTAPSPNSGT 160
SP +P AP+P SG+
Sbjct: 134 PRHSVISPAPSPVEFEDGPALAPAPISGS 162
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 26 TVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCT 85
TV+ VGDS GW +P G WA+ K F +GDVL F + H+V +V + +Y C
Sbjct: 1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60
Query: 86 SSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131
+ PI TG I L + G+ YYIC +HC GQK+ I V+
Sbjct: 61 DTTPIA-SYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINVTV 105
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 7 MAFAGVIAVALL-----MECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDV 61
MAF+ + + L M + TV+ VGD+ GW I G Y+ WA+ K F VGD
Sbjct: 1 MAFSNALVLCFLLAIINMALPSLATVYTVGDTSGWVI-----GGDYSTWASDKTFAVGDS 55
Query: 62 LTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQA 121
L FN+ H V V ++ Y CTS N I +TG I L AG+HY+IC H
Sbjct: 56 LVFNYGAGAHTVDEVKESDYKSCTSGNSISTD-STGATTIPLKKAGKHYFICGVPGHSTG 114
Query: 122 GQKLAITV 129
G KL+I V
Sbjct: 115 GMKLSIKV 122
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 26 TVHVVGDSMGWS--IPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDG 83
TVH VGDS GW+ +P Y WA++ F VGD L FN+ H+VL+V + +
Sbjct: 2 TVHKVGDSTGWTTLVPYD-----YAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKS 56
Query: 84 CTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITVSATPGPS 136
C SS+P + T+G +I L G Y++C HCQ GQK+ I V PG S
Sbjct: 57 CNSSSPAAS-YTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD--PGSS 106
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 3 KFASMAFAGVIAVALLMECAAAQTVHVVGDSMGWSIPTSGGAGA--------YNNWAATK 54
K S++F I ++L T+ + ++ +++ GG+GA Y +W+
Sbjct: 5 KMKSLSFFFTILLSL-------STLFTISNARKFNV---GGSGAWVTNPPENYESWSGKN 54
Query: 55 NFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICT 114
F+V D L F++ VL V KA YD C + NPI + G + I+LD G Y+I
Sbjct: 55 RFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKR-VDDGDSEISLDRYGPFYFISG 113
Query: 115 FGRHCQAGQKLAITVSATPGPSPSPTGNPTPPTTTTPTAPSPNSGTPDDCTP 166
+C+ GQKL + V + PS T +P A +P S TP TP
Sbjct: 114 NEDNCKKGQKLNVVVISARIPS----------TAQSPHAAAPGSSTPGSMTP 155
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 21 CAAAQTV-HVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKA 79
C A++V + VGD GW+ TSG W A K F GDVL F + H+V+ VP
Sbjct: 25 CEVAESVVYTVGDGGGWTFGTSG-------WPAGKTFRAGDVLVFKYNPAVHNVVSVPAG 77
Query: 80 SYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAIT 128
Y CT+S P +G ITL S G +Y+IC+ HCQ G K+A+T
Sbjct: 78 GYKSCTAS-PGSRVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAVT 124
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 13 IAVALLMECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHD 72
++V LL + VGDS W+ G W K+F GDVL FN+ H+
Sbjct: 21 VSVLLLQADYVQAATYTVGDSGIWTFNAVG-------WPKGKHFRAGDVLVFNYNPRMHN 73
Query: 73 VLRVPKASYDGCTSSNPIG-NPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAIT 128
V++V SY+ C + P G P T+G ITL S G++++IC F HC++ K+A+T
Sbjct: 74 VVKVDSGSYNNCKT--PTGAKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAVT 127
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 47 YNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDSA 106
Y WA K+F +GD L F F N+H++L V K Y+GC + +PI N +I +
Sbjct: 43 YTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQ 102
Query: 107 GEHYYICTFGRHCQAGQKLAITVSATPGPSPS 138
+HYY+ C G KL++ V P P S
Sbjct: 103 TKHYYLLDGKGGCYGGMKLSVKVEKLPPPPKS 134
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 17 LLMECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRV 76
LL ++ + V G + W IP+S + + N WA + F VGD L + + + VL+V
Sbjct: 16 LLTNLVCSKEIIVGGKTSSWKIPSSP-SESLNKWAESLRFRVGDTLVWKYDEEKDSVLQV 74
Query: 77 PKASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAITVSATPGPS 136
K +Y C ++NP N + G + L+ +G +++I +C G+KL I V ++ G
Sbjct: 75 TKDAYINCNTTNPAAN-YSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSRGGH 133
Query: 137 PSPTGNPTPPTTTTPTAPSPNSGTPDDCTPAPTSGPTAGGPAGSTT 182
+ P+ A APT P +GG A S T
Sbjct: 134 TGGFFTGSSPSPAPSPA----------LLGAPTVAPASGGSASSLT 169
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 47 YNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDSA 106
Y+ WA K F VGD+L F + + H V V KA YDGC +S+ N + G I L +
Sbjct: 42 YSGWATGKTFRVGDILEFKY-GSSHTVDVVDKAGYDGCDASSSTENH-SDGDTKIDLKTV 99
Query: 107 GEHYYICTFGRHCQ--AGQKLAITVSA 131
G +Y+IC+ HC+ G KLA+ V A
Sbjct: 100 GINYFICSTPGHCRTNGGMKLAVNVVA 126
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 27 VHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTS 86
V+VVG S GW+ T +W K F GD+L FN+ H+V+ V + + C +
Sbjct: 2 VYVVGGSGGWTFNTE-------SWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNT 54
Query: 87 SNPIGNPI-TTGPANITLDSAGEHYYICTFGRHCQAGQKLAI 127
P G + T+G I L G+ Y+IC F HCQ+G K+A+
Sbjct: 55 --PAGAKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAV 93
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 MAFAGVIAVALLMECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNF 66
MA G++AV E V G GW + A ++N WA F V D + F
Sbjct: 14 MAVLGLVAVFSSSEA----YVFYAGGRDGWVVDP---AESFNYWAERNRFQVNDTIVFL- 65
Query: 67 VTNEHD------VLRVPKASYDGCTSSNPIGN--PITTGPANITLDSAGEHYYICTFGRH 118
HD VL+V + +D C++ NP+ + G + D +G ++I
Sbjct: 66 ----HDDEVGGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDR 121
Query: 119 CQAGQKLAITVSA----TPGPSPSPTGNPTPPTTTT 150
CQ GQKL I V A P +P P G P ++ +
Sbjct: 122 CQKGQKLYIIVMAVRPTKPSEAPEPAGAAGPVSSKS 157
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 12 VIAVALLMECAAAQTVHVVGDSMG-WSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNE 70
+ ++ +L+ + + T ++VGDS W P A WA+ F+VGD +TF +
Sbjct: 12 IFSIWMLISYSES-TDYLVGDSENSWKFPLPT-RHALTRWASNYQFIVGDTITFQYNNKT 69
Query: 71 HDVLRVPKASYDGCTSSNPIGNPITTGPAN--ITLDSAGEHYYICTFGRHCQAGQKLAIT 128
V V + YD C G + N + L G H++I RHC+ G KLA+
Sbjct: 70 ESVHEVEEEDYDRCGIR---GEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVV 126
Query: 129 VSATP 133
V P
Sbjct: 127 VMVAP 131
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 9 FAGVIAVALLMECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT 68
F ++A+ LL+ + A+ V G W P S + ++WA + F +GD L F +
Sbjct: 11 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSK-PDSLSHWANSHRFKIGDTLIFKYEK 69
Query: 69 NEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQKLAIT 128
V + Y+GC + G + L G ++I HCQ G KLA+
Sbjct: 70 RTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVL 129
Query: 129 V 129
V
Sbjct: 130 V 130
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 12 VIAVALLMECAAAQTVHVVGDSMG-WSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNE 70
+I L+ + T +++GDS W +P A+ WA+ F VGD + F +
Sbjct: 11 IIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRR-AFARWASAHEFTVGDTILFEYDNET 69
Query: 71 HDVLRVPKASYDGCTSSNPIGNPITTGPAN--ITLDSAGEHYYICTFGRHCQAGQKLAIT 128
V V + Y C ++ G + N + LD G +++I RHC+ G KLA+
Sbjct: 70 ESVHEVNEHDYIMCHTN---GEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAVV 126
Query: 129 VS 130
V
Sbjct: 127 VQ 128
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80
PE=3 SV=1
Length = 1612
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 130 SATPGPSPSPTGNPTPPTTTTPTAPSPN------SGTPDDCTPAPTSG---PTAG-GPAG 179
+ +P P P N PT P+ PSP +GTP P P SG P +G P G
Sbjct: 62 APSPLPGALPPLNGGAPTPAHPSDPSPQYQAHSAAGTPQYPLPRPYSGSLLPASGTSPYG 121
Query: 180 STTPSNNNPSAIPDSSS 196
+TPS+ +PS+ PDS +
Sbjct: 122 PSTPSHAHPSSRPDSHA 138
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 26 TVHVVG--DSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPK-ASYD 82
V++VG + GW + + AY W+A + F DVL FNF T E V V + +Y
Sbjct: 2 KVYLVGGPELGGWKLQSD--PRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYH 59
Query: 83 GCTSSNPIGNPITTGPANITLDSAGEHYYICT 114
C +PI GP TL + G H +ICT
Sbjct: 60 ACDIKDPI-RLEPGGPDRFTLLTPGSH-FICT 89
>sp|Q2J728|IF2_FRASC Translation initiation factor IF-2 OS=Frankia sp. (strain CcI3)
GN=infB PE=3 SV=1
Length = 1062
Score = 38.9 bits (89), Expect = 0.024, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 137 PSPTGNPTP-PTTTTPTAPSPNSGTPDDCTPAPTSGPTAGGPAGSTTPSNNNPSA 190
PS P P P P AP G P TP P SGPTAGGP P+ P+A
Sbjct: 162 PSAPSGPRPGPNAPRPGAPQ-GGGRPRPGTPVPPSGPTAGGPTAG-GPTAGGPTA 214
>sp|O43157|PLXB1_HUMAN Plexin-B1 OS=Homo sapiens GN=PLXNB1 PE=1 SV=3
Length = 2135
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 111 YICTFGRHCQAGQKLAITVSATPGPSPSPTGNPTPPTTTTPTAPSPNSGTPDDCTPAPTS 170
++CT C AG +A S P P G P+P T P A + TPAP +
Sbjct: 658 HLCTHKASCDAGPMVASHQSPLVSPDPPARGGPSPSPPTAPKALA---------TPAPDT 708
Query: 171 GPTAGGPAGSTTPSNNNPSAIP 192
P G + T S+ +P A P
Sbjct: 709 LPVEPGAPSTATASDISPGASP 730
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,192,987
Number of Sequences: 539616
Number of extensions: 4940795
Number of successful extensions: 57690
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 1629
Number of HSP's that attempted gapping in prelim test: 31921
Number of HSP's gapped (non-prelim): 17086
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)