Query 036938
Match_columns 217
No_of_seqs 182 out of 870
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 11:20:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 3.7E-42 1.3E-46 278.9 5.8 108 24-134 2-111 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 1E-40 3.5E-45 260.5 5.3 107 24-134 1-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 6.5E-40 2.2E-44 258.6 6.2 106 26-134 2-108 (116)
4 2cbp_A Cucumber basic protein; 100.0 2.9E-38 9.8E-43 241.4 4.8 96 26-130 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 6E-34 2E-38 215.7 6.6 91 26-130 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.4 1.2E-12 3.9E-17 103.3 8.2 97 23-130 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.2 1.6E-11 5.4E-16 89.0 4.8 85 27-130 4-91 (91)
8 2cal_A Rusticyanin; iron respi 99.2 4E-11 1.4E-15 97.4 6.8 77 53-130 62-154 (154)
9 2aan_A Auracyanin A; cupredoxi 99.0 2.2E-09 7.6E-14 84.4 10.9 96 23-130 16-139 (139)
10 1pmy_A Pseudoazurin; electron 99.0 8.2E-10 2.8E-14 86.7 7.7 73 53-132 22-95 (123)
11 1paz_A Pseudoazurin precursor; 99.0 1.2E-09 4E-14 85.8 7.2 73 52-131 21-94 (123)
12 1plc_A Plastocyanin; electron 98.9 2.9E-09 1E-13 78.6 7.6 89 28-130 3-99 (99)
13 2gim_A Plastocyanin; beta shee 98.9 4.2E-09 1.4E-13 78.4 8.5 88 27-130 5-105 (106)
14 1iuz_A Plastocyanin; electron 98.9 6.5E-10 2.2E-14 82.5 3.7 90 27-130 3-98 (98)
15 1b3i_A PETE protein, protein ( 98.9 5.3E-09 1.8E-13 76.8 8.0 73 53-130 20-97 (97)
16 3ef4_A Pseudoazurin, blue copp 98.9 4.3E-09 1.5E-13 83.2 7.7 73 52-131 22-95 (124)
17 3tu6_A Pseudoazurin (blue copp 98.9 2.8E-09 9.6E-14 84.4 6.4 75 52-133 23-98 (127)
18 3erx_A Pseudoazurin; copper pr 98.9 2.6E-09 8.7E-14 84.1 5.9 71 52-131 21-94 (123)
19 1kdj_A Plastocyanin; electron 98.9 5E-09 1.7E-13 77.6 6.8 90 28-130 3-102 (102)
20 1byp_A Protein (plastocyanin); 98.8 1.2E-08 4E-13 75.2 7.2 89 28-130 3-99 (99)
21 2plt_A Plastocyanin; electron 98.8 2.4E-09 8.1E-14 78.7 3.1 90 27-130 3-98 (98)
22 1pcs_A Plastocyanin; electron 98.7 2.7E-08 9.2E-13 73.1 6.1 90 27-130 4-98 (98)
23 3c75_A Amicyanin; copper prote 98.5 1.7E-07 5.8E-12 73.8 5.5 71 52-130 60-132 (132)
24 3ay2_A Lipid modified azurin p 98.3 1.6E-06 5.3E-11 71.8 8.0 93 26-130 43-166 (167)
25 1cuo_A Protein (azurin ISO-2); 98.3 7.8E-06 2.7E-10 64.6 10.8 92 27-130 4-128 (129)
26 2ux6_A Pseudoazurin; type-1 co 98.2 1.2E-06 4.2E-11 68.3 5.5 70 53-131 22-92 (122)
27 3cvb_A Plastocyanin; cupredoxi 98.2 1.8E-06 6.3E-11 63.5 5.5 88 27-130 4-104 (105)
28 2ov0_A Amicyanin; beta-sandwic 98.2 3.2E-06 1.1E-10 63.4 6.2 84 23-130 16-105 (105)
29 4hci_A Cupredoxin 1; structura 98.1 5E-07 1.7E-11 67.1 1.0 67 52-130 28-100 (100)
30 1id2_A Amicyanin; beta barrel, 98.1 6.8E-06 2.3E-10 61.9 6.7 70 53-130 35-106 (106)
31 2iaa_C Azurin; quinoprotein, t 98.0 2.6E-05 9E-10 61.5 9.4 91 28-130 4-127 (128)
32 2ccw_A Azurin II, AZN-2; elect 97.9 3.8E-05 1.3E-09 60.6 8.6 92 27-130 4-128 (129)
33 1nwp_A Azurin; electron transp 97.9 3.3E-05 1.1E-09 61.0 8.1 92 27-130 4-128 (128)
34 2x11_B Ephrin-A5; receptor-sig 97.6 8.6E-05 2.9E-09 62.1 5.5 78 54-134 52-165 (177)
35 1iko_P Ephrin-B2; greek KEY, g 97.5 1.7E-05 5.7E-10 66.5 -0.1 79 55-133 25-142 (178)
36 3czu_B Ephrin-A1; ATP-binding, 97.2 0.00057 2E-08 57.4 5.9 106 20-136 24-165 (182)
37 3d12_B Ephrin-B3; beta propell 96.9 0.00053 1.8E-08 55.4 3.0 75 54-130 22-140 (141)
38 1shx_A Ephrin-A5; ephrin signa 96.8 0.002 6.9E-08 51.8 5.6 77 54-133 23-135 (138)
39 2vsm_B Ephrin-B2; developmenta 96.8 0.00053 1.8E-08 55.3 2.3 76 55-130 24-138 (140)
40 2cua_A Protein (CUA); CUA cent 96.7 0.0024 8.2E-08 50.5 5.8 66 53-130 61-134 (135)
41 1iby_A Nitrosocyanin; RED copp 96.6 0.003 1E-07 47.1 5.4 66 53-130 39-111 (112)
42 3fsa_A Azurin; copper, cupredo 96.3 0.034 1.2E-06 43.8 10.1 73 54-130 20-125 (125)
43 2dv6_A Nitrite reductase; elec 95.6 0.0099 3.4E-07 54.1 4.8 75 52-134 55-135 (447)
44 3s8f_B Cytochrome C oxidase su 95.5 0.023 7.9E-07 46.7 6.1 67 52-130 93-167 (168)
45 2wo3_B Ephrin-A2; transferase- 93.9 0.055 1.9E-06 44.3 4.4 76 54-133 32-145 (157)
46 3hei_B Ephrin-A1; EPH receptor 93.3 0.082 2.8E-06 42.1 4.3 77 54-130 22-131 (132)
47 3sbq_A Nitrous-oxide reductase 93.1 0.1 3.5E-06 51.0 5.4 68 52-131 558-637 (638)
48 1fwx_A Nitrous oxide reductase 92.2 0.2 6.8E-06 48.6 6.1 68 53-132 514-593 (595)
49 1mzy_A Copper-containing nitri 84.1 0.82 2.8E-05 40.0 3.9 76 54-133 66-154 (333)
50 1kbv_A ANIA, major outer membr 83.2 1.4 4.7E-05 38.7 5.0 77 53-133 71-158 (327)
51 1oe1_A Dissimilatory copper-co 82.7 1 3.5E-05 39.3 4.0 76 54-133 67-154 (336)
52 2zoo_A Probable nitrite reduct 74.6 1.2 4.2E-05 40.2 2.0 77 53-133 61-148 (442)
53 3gdc_A Multicopper oxidase; be 73.7 3.9 0.00013 35.1 4.8 79 53-133 67-156 (288)
54 2bw4_A Copper-containing nitri 71.9 3 0.0001 36.4 3.7 76 54-133 73-160 (340)
55 1fft_B Ubiquinol oxidase; elec 69.2 9.2 0.00031 34.1 6.3 84 27-130 129-225 (315)
56 1cyx_A CYOA; electron transpor 66.0 4.9 0.00017 34.0 3.7 65 53-130 42-115 (205)
57 3hb3_B Cytochrome C oxidase su 65.7 5 0.00017 35.6 3.9 65 54-131 191-264 (298)
58 1oe1_A Dissimilatory copper-co 63.7 5.6 0.00019 34.5 3.8 35 99-133 285-320 (336)
59 2gsm_B Cytochrome C oxidase su 63.4 5.9 0.0002 34.3 3.9 65 54-131 173-246 (262)
60 3gdc_A Multicopper oxidase; be 62.4 2.5 8.6E-05 36.3 1.3 32 100-131 257-288 (288)
61 1v54_B Cytochrome C oxidase po 62.1 5.5 0.00019 33.8 3.3 30 100-131 183-215 (227)
62 1mzy_A Copper-containing nitri 60.4 3.8 0.00013 35.6 2.1 32 100-131 286-318 (333)
63 3l6w_A Hemocyanin 1; cupredoxi 57.6 6.9 0.00024 37.1 3.4 76 53-130 412-491 (491)
64 1sdd_A Coagulation factor V; c 57.4 1.3 4.6E-05 38.4 -1.4 76 53-131 216-300 (306)
65 2zwn_A Two-domain type laccase 54.0 10 0.00036 33.1 3.8 78 53-132 36-127 (339)
66 1yel_A AT1G16640; CESG, protei 52.7 5.4 0.00018 29.2 1.5 19 51-69 73-91 (104)
67 3kw8_A Laccase, putative coppe 49.3 8.2 0.00028 32.8 2.3 30 105-134 239-268 (276)
68 3iuw_A Activating signal coint 48.1 7.1 0.00024 28.5 1.5 16 54-69 36-52 (83)
69 1v10_A Laccase; multicopper bl 47.5 22 0.00074 33.1 5.0 34 100-133 117-151 (521)
70 1aoz_A Ascorbate oxidase; oxid 45.3 30 0.001 32.2 5.7 79 53-133 35-125 (552)
71 3t9w_A Small laccase, multi-co 44.6 8.2 0.00028 33.3 1.6 33 104-136 260-292 (299)
72 3cg8_A Laccase; oxidoreductase 44.4 8.5 0.00029 34.0 1.7 81 53-135 210-310 (343)
73 2q9o_A Laccase-1; multicopper 42.2 22 0.00075 33.4 4.3 77 54-132 69-158 (559)
74 4i1k_A B3 domain-containing tr 41.2 13 0.00045 29.2 2.2 26 51-76 112-137 (146)
75 1zpu_A Iron transport multicop 40.0 31 0.0011 32.2 4.9 79 53-133 35-126 (534)
76 3g5w_A Multicopper oxidase typ 39.7 17 0.00057 31.6 2.8 77 54-132 36-126 (318)
77 1kbv_A ANIA, major outer membr 39.5 13 0.00046 32.2 2.2 33 100-132 275-308 (327)
78 3t6v_A Laccase; beta barrel, o 38.2 48 0.0017 30.7 5.9 78 54-133 37-131 (495)
79 3pxl_A Laccase; 4-copper prote 36.9 71 0.0024 29.6 6.8 78 54-133 36-130 (499)
80 3sqr_A Laccase; multicopper ox 36.5 35 0.0012 32.5 4.7 33 100-132 156-188 (580)
81 2hzs_I RNA polymerase II media 36.2 0.55 1.9E-05 27.1 -4.8 19 53-71 4-22 (27)
82 2xu9_A Laccase; oxidoreductase 35.4 54 0.0018 29.5 5.6 76 55-131 50-135 (439)
83 2uxt_A Protein SUFI, SUFI; oxi 34.6 17 0.00057 33.2 2.0 71 54-132 52-139 (451)
84 1sdd_B Coagulation factor V; c 34.1 18 0.00061 34.4 2.2 32 100-131 296-327 (647)
85 2j5w_A Ceruloplasmin, ferroxid 32.9 14 0.00048 37.6 1.4 76 53-133 633-719 (1065)
86 2zoo_A Probable nitrite reduct 32.0 25 0.00086 31.5 2.8 34 100-133 265-299 (442)
87 2bw4_A Copper-containing nitri 31.4 36 0.0012 29.3 3.6 32 100-131 292-324 (340)
88 3tas_A Small laccase, multi-co 30.5 20 0.00068 31.0 1.8 32 105-136 245-276 (313)
89 2kbn_A Conserved protein; nucl 30.4 31 0.0011 25.5 2.6 42 27-76 38-83 (109)
90 2r7e_B Coagulation factor VIII 30.3 38 0.0013 33.4 3.9 76 54-133 201-299 (770)
91 3t9w_A Small laccase, multi-co 29.8 1.8E+02 0.0063 24.6 7.9 29 105-133 130-164 (299)
92 3g5w_A Multicopper oxidase typ 28.4 47 0.0016 28.8 3.8 34 100-133 239-278 (318)
93 3kw8_A Laccase, putative coppe 28.2 55 0.0019 27.6 4.1 78 54-134 38-143 (276)
94 2r7e_A Coagulation factor VIII 27.7 47 0.0016 32.5 4.0 33 100-132 298-330 (742)
95 2r7e_B Coagulation factor VIII 27.5 6.3 0.00022 39.0 -2.2 74 53-131 369-456 (770)
96 1xne_A Hypothetical protein PF 27.1 16 0.00056 27.8 0.5 12 54-65 33-44 (113)
97 2dv6_A Nitrite reductase; elec 26.8 38 0.0013 30.3 3.0 33 100-132 402-434 (447)
98 3tas_A Small laccase, multi-co 26.8 86 0.0029 26.9 5.2 29 105-133 114-148 (313)
99 2qcp_X Cation efflux system pr 26.4 32 0.0011 24.3 1.9 18 52-69 50-67 (80)
100 2vb2_X Copper protein, cation 26.2 31 0.0011 24.8 1.9 21 49-69 55-75 (88)
101 1sdd_A Coagulation factor V; c 26.0 1E+02 0.0035 26.3 5.5 79 54-133 62-168 (306)
102 1hfu_A Laccase 1; oxidoreducta 25.5 81 0.0028 29.0 5.0 78 55-133 37-130 (503)
103 2z0t_A Putative uncharacterize 25.4 20 0.00067 27.2 0.7 11 54-64 32-42 (109)
104 2k75_A Uncharacterized protein 25.2 28 0.00095 25.6 1.5 29 27-65 41-69 (106)
105 2r7e_A Coagulation factor VIII 23.9 22 0.00077 34.8 1.0 76 54-132 628-712 (742)
106 2l55_A SILB,silver efflux prot 23.2 40 0.0014 24.0 1.9 21 49-69 41-61 (82)
107 3zx1_A Oxidoreductase, putativ 23.1 74 0.0025 29.4 4.3 82 55-136 85-176 (481)
108 2zwn_A Two-domain type laccase 22.6 75 0.0026 27.5 4.0 33 100-132 240-278 (339)
109 1ac0_A Glucoamylase; hydrolase 22.5 20 0.00068 26.2 0.2 44 25-68 21-73 (108)
110 2j5w_A Ceruloplasmin, ferroxid 22.2 43 0.0015 34.1 2.7 77 53-134 272-359 (1065)
111 1wid_A DNA-binding protein RAV 20.1 44 0.0015 25.4 1.7 18 51-68 87-104 (130)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=3.7e-42 Score=278.93 Aligned_cols=108 Identities=45% Similarity=0.846 Sum_probs=100.9
Q ss_pred cceEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCCCCcEEEe-cCCCCCCCCCCCCCCCCccCCCceEE
Q 036938 24 AQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRV-PKASYDGCTSSNPIGNPITTGPANIT 102 (217)
Q Consensus 24 ~A~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVv~V-s~~~Y~~C~~~~~i~~~~ssG~~~v~ 102 (217)
+|++|+|||+.||++++ + ..+|++||++|+|+|||+|+|+|..+.|+|+|| ++++|+.|+..+++ ..+++|++.|+
T Consensus 2 ~a~~~~VGg~~GW~~~~-~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~-~~~~~G~~~v~ 78 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPS-S-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSD-NDVERTSPVIE 78 (138)
T ss_dssp CCCEEETTGGGCSSCCS-S-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSC-CCCCCCSCEEE
T ss_pred CceEEEECCcCcCcCCC-C-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCcc-ccccCCCeEEE
Confidence 57899999999999983 2 468999999999999999999999999999999 99999999999999 89999999999
Q ss_pred e-CCCCcEEEEcCCCCCCCCCCeEEEEeeCCCC
Q 036938 103 L-DSAGEHYYICTFGRHCQAGQKLAITVSATPG 134 (217)
Q Consensus 103 L-~~~G~~YFiC~v~gHC~~GmKl~I~V~~~~~ 134 (217)
| +++|+|||||++++||++||||+|+|....+
T Consensus 79 L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 79 RLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp ECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred eccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 9 9999999999999999999999999997654
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1e-40 Score=260.46 Aligned_cols=107 Identities=39% Similarity=0.766 Sum_probs=98.7
Q ss_pred cceEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCCceEEe
Q 036938 24 AQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITL 103 (217)
Q Consensus 24 ~A~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~~v~L 103 (217)
+|++|+|||+.||++++ ..+|++||++|+|+|||+|+|+|.++.|+|+||++++|+.|+..+++ ..+++|++.|+|
T Consensus 1 ~a~~~~VG~~~GW~~~~---~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~-~~~~~G~~~v~L 76 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLV---PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPA-ASYTSGADSIPL 76 (109)
T ss_dssp CCCEEETTGGGCSCSSS---CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCS-EEECSSEEEEEC
T ss_pred CCcEEEeCCCCCccCCC---CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcc-cccCCCCEEEEE
Confidence 36889999999999973 36899999999999999999999999999999999999999999998 889999999999
Q ss_pred CCCCcEEEEcCCCCCCCCCCeEEEEeeCCCC
Q 036938 104 DSAGEHYYICTFGRHCQAGQKLAITVSATPG 134 (217)
Q Consensus 104 ~~~G~~YFiC~v~gHC~~GmKl~I~V~~~~~ 134 (217)
+++|++||||++++||++||||+|+|.++.+
T Consensus 77 ~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 77 KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp CSSEEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CCCcCEEEECCCCCcccCCCEEEEEEcCCCC
Confidence 9999999999999999999999999986543
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=6.5e-40 Score=258.57 Aligned_cols=106 Identities=44% Similarity=0.818 Sum_probs=96.6
Q ss_pred eEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCCceEEeCC
Q 036938 26 TVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDS 105 (217)
Q Consensus 26 ~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~~v~L~~ 105 (217)
++|+|||+.||+++. ...+|++||++++|+|||+|+|+|.++.|+|+||++++|+.|+..+++ ..+++|++.|+|++
T Consensus 2 ~~~~VG~~~GW~~~~--~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~-~~~~~G~~~v~l~~ 78 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS--DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPI-SHMTTPPVKIMLNT 78 (116)
T ss_dssp CEEETTGGGCSSCCS--STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCS-EEECSSSEEEECCS
T ss_pred eEEEECCcCcCcCCC--CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCc-cccCCCCeEEEECC
Confidence 579999999999862 237899999999999999999999999999999999999999999998 88999999999999
Q ss_pred CCcEEEEcCCCCCCCCCCeEEE-EeeCCCC
Q 036938 106 AGEHYYICTFGRHCQAGQKLAI-TVSATPG 134 (217)
Q Consensus 106 ~G~~YFiC~v~gHC~~GmKl~I-~V~~~~~ 134 (217)
+|++||||++++||++||||+| +|.++.+
T Consensus 79 ~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 79 TGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp CEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred CCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 9999999999999999999999 8875543
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=2.9e-38 Score=241.41 Aligned_cols=96 Identities=35% Similarity=0.747 Sum_probs=91.6
Q ss_pred eEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCCceEEeCC
Q 036938 26 TVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDS 105 (217)
Q Consensus 26 ~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~~v~L~~ 105 (217)
++|+|||+.||++ +|++||++++|++||+|+|+|.++.|+|+||++++|+.|+..+++ ..+++|++.|+| +
T Consensus 1 ~~~~VG~~~GW~~-------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~-~~~~~G~~~v~L-~ 71 (96)
T 2cbp_A 1 AVYVVGGSGGWTF-------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGA-KVYTSGRDQIKL-P 71 (96)
T ss_dssp CEEETTGGGCSCS-------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTC-EEECSSEEEEEC-C
T ss_pred CEEEECCcCCCcc-------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCc-ccccCCCeEEEe-c
Confidence 4799999999996 499999999999999999999999999999999999999999998 889999999999 8
Q ss_pred CCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 106 AGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 106 ~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+|++||||++++||++||||+|+|+
T Consensus 72 ~g~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 72 KGQSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp SEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred CCCEEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=6e-34 Score=215.69 Aligned_cols=91 Identities=35% Similarity=0.735 Sum_probs=85.5
Q ss_pred eEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCCceEEeCC
Q 036938 26 TVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGPANITLDS 105 (217)
Q Consensus 26 ~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~~v~L~~ 105 (217)
++|+| ||+++ ++|+++++|++||+|+|+|.++.|+|+||++++|+.|+..+++ ..+++|++.|+|+
T Consensus 1 ~~y~V----gW~~~--------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~-~~~~~G~~~v~L~- 66 (91)
T 1f56_A 1 AVYNI----GWSFN--------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGA-RTYSSGQDRIKLT- 66 (91)
T ss_dssp CEEEE----ECSSS--------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTC-EEECSSEEEEECC-
T ss_pred CEEEE----eCCCC--------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCc-ccccCCCcEEEeC-
Confidence 46899 79963 7999999999999999999999999999999999999999998 8899999999996
Q ss_pred CCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 106 AGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 106 ~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+|++||||++++||++||||+|+|.
T Consensus 67 ~g~~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 67 RGQNYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp SEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred CCCeEEEcCCCCccccCCEEEEEEC
Confidence 8999999999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.37 E-value=1.2e-12 Score=103.32 Aligned_cols=97 Identities=21% Similarity=0.339 Sum_probs=66.2
Q ss_pred ccceEEEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeC-----CCCcEEEecCC-C---------------
Q 036938 23 AAQTVHVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT-----NEHDVLRVPKA-S--------------- 80 (217)
Q Consensus 23 a~A~~y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~-----~~HsVv~Vs~~-~--------------- 80 (217)
+...++.|+.. .+|.+.| ...++++||+|+|.|.+ ..|+++..... +
T Consensus 14 ~~~~~v~V~~~~~~~~F~P-----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQ-----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADA 82 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSC-----------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGG
T ss_pred CCCEEEEEEEeCCCceEeC-----------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccc
Confidence 34566777754 4588873 35789999999999976 47999887422 1
Q ss_pred -CCCC-CCCCCC--CCCccCC---CceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 81 -YDGC-TSSNPI--GNPITTG---PANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 81 -Y~~C-~~~~~i--~~~~ssG---~~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
|..= +..+.+ ......| ...|+++++|.|||+|++++||+.|||..|+|.
T Consensus 83 ~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 83 LFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TTCCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cccCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 1100 000000 0122333 346888899999999999999999999999996
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.18 E-value=1.6e-11 Score=88.99 Aligned_cols=85 Identities=19% Similarity=0.242 Sum_probs=61.3
Q ss_pred EEEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeC-CCCcEEEecCCCCCCCCCCCCCCCCccCC-CceEEe
Q 036938 27 VHVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT-NEHDVLRVPKASYDGCTSSNPIGNPITTG-PANITL 103 (217)
Q Consensus 27 ~y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG-~~~v~L 103 (217)
+..+|++ .+|.+.| +..++++||+|+|++.. ..|+|.......+. . .. .....| ...+++
T Consensus 4 ~v~~~~~~~~~~f~P-----------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~---~-~~--~~~~~g~~~~~~f 66 (91)
T 1bxv_A 4 AIKMGADNGMLAFEP-----------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS---H-KD--LAFSPGETFEATF 66 (91)
T ss_dssp EEEESCTTSCSSEES-----------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC---E-EE--EECSTTCEEEEEC
T ss_pred EEEEecCCCccEEeC-----------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC---c-cc--ceeCCCCEEEEEe
Confidence 3456654 4577663 35689999999999875 57999876532221 0 01 123345 357899
Q ss_pred CCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 104 DSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 104 ~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+++|.|+|+|. .||+.|||..|.|.
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 99999999999 89999999999984
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.16 E-value=4e-11 Score=97.35 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=58.8
Q ss_pred CCceeeCCEEEEEEeCC----CCcEEEec-CCCCCCCCCCCCCC------CCccCCC---c--eEEeCCCCcEEEEcCCC
Q 036938 53 TKNFVVGDVLTFNFVTN----EHDVLRVP-KASYDGCTSSNPIG------NPITTGP---A--NITLDSAGEHYYICTFG 116 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~----~HsVv~Vs-~~~Y~~C~~~~~i~------~~~ssG~---~--~v~L~~~G~~YFiC~v~ 116 (217)
..++++||+|+|++.+. .|+++.++ ...|+.|.....+. .....|. . .|++ ++|.|||+|+++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 46889999999999753 69999994 45788886543320 1223443 3 4577 999999999999
Q ss_pred CCCCCCCeEEEEee
Q 036938 117 RHCQAGQKLAITVS 130 (217)
Q Consensus 117 gHC~~GmKl~I~V~ 130 (217)
+||+.|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999884
No 9
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.02 E-value=2.2e-09 Score=84.41 Aligned_cols=96 Identities=21% Similarity=0.285 Sum_probs=65.2
Q ss_pred ccceEEEecC-CCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCC----CCcEEEecCC------------------
Q 036938 23 AAQTVHVVGD-SMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTN----EHDVLRVPKA------------------ 79 (217)
Q Consensus 23 a~A~~y~VGg-~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~----~HsVv~Vs~~------------------ 79 (217)
++..++.||. ..++.+.| ...++++||+++|+|.+. .|+++.....
T Consensus 16 ~~~~~V~v~~~~~~~~F~p-----------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~ 84 (139)
T 2aan_A 16 SGPVTIEIGSKGEELAFDK-----------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAA 84 (139)
T ss_dssp -CCEEEEEEBCTTSSSBSC-----------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGG
T ss_pred CcCEEEEEEecCCccEEcC-----------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccc
Confidence 3344566642 23577663 356899999999988653 6999988532
Q ss_pred CCCCCCCCCCC--CCCccCCCc-e--EEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 80 SYDGCTSSNPI--GNPITTGPA-N--ITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 80 ~Y~~C~~~~~i--~~~~ssG~~-~--v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+|..|...+.+ ...+..|.. . |+++++|.|+|+|.+++||+ ||+..|.|.
T Consensus 85 ~~~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 85 NYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp TTCCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cccCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 57777533211 023445543 4 44458999999999999999 999999884
No 10
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=99.00 E-value=8.2e-10 Score=86.70 Aligned_cols=73 Identities=21% Similarity=0.279 Sum_probs=53.7
Q ss_pred CCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCC-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeC
Q 036938 53 TKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGP-ANITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~ 131 (217)
..++++||+|+|.+....|+|+... .|...+........|. ..++++++|.|+|+|. .||..||+..|+|..
T Consensus 22 ~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 5789999999999987789998752 2222211101112333 4789999999999999 599999999999975
Q ss_pred C
Q 036938 132 T 132 (217)
Q Consensus 132 ~ 132 (217)
+
T Consensus 95 ~ 95 (123)
T 1pmy_A 95 K 95 (123)
T ss_dssp C
T ss_pred C
Confidence 3
No 11
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.96 E-value=1.2e-09 Score=85.83 Aligned_cols=73 Identities=22% Similarity=0.206 Sum_probs=53.3
Q ss_pred cCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCC-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 52 ATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGP-ANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+..++++||+|+|.+....|+|+... .|...+........|. ..++++++|.|+|+|. .||+.||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEc
Confidence 35789999999999987789998741 2222211100111233 4789999999999998 59999999999997
Q ss_pred C
Q 036938 131 A 131 (217)
Q Consensus 131 ~ 131 (217)
.
T Consensus 94 ~ 94 (123)
T 1paz_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 5
No 12
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.92 E-value=2.9e-09 Score=78.62 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=60.2
Q ss_pred EEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCC-CCcEEEecCC---CCCCCC--CCCCCCCCccCCC-c
Q 036938 28 HVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTN-EHDVLRVPKA---SYDGCT--SSNPIGNPITTGP-A 99 (217)
Q Consensus 28 y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVv~Vs~~---~Y~~C~--~~~~i~~~~ssG~-~ 99 (217)
..+|++ .++.+.| +..++++||+|+|++... .|+|+..+.. ..+.+. ..... .....|. .
T Consensus 3 v~m~~~~~~~~F~P-----------~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~-~~~~~G~~~ 70 (99)
T 1plc_A 3 VLLGADDGSLAFVP-----------SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEED-LLNAKGETF 70 (99)
T ss_dssp EEESCTTCCSCEES-----------SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTC-CBCSTTCEE
T ss_pred EEEecCCCcceEeC-----------CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCc-cccCCCCEE
Confidence 456643 4466653 357899999999988764 7999876431 111110 00000 1234454 4
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
.++++++|.|+|+|. .||+.||+..|.|.
T Consensus 71 ~~tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 71 EVALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 789999999999999 89999999999984
No 13
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.92 E-value=4.2e-09 Score=78.38 Aligned_cols=88 Identities=22% Similarity=0.226 Sum_probs=60.3
Q ss_pred EEEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeC-CCCcEEEecCCCCC-----C--CCCCCCCCCCccCC
Q 036938 27 VHVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT-NEHDVLRVPKASYD-----G--CTSSNPIGNPITTG 97 (217)
Q Consensus 27 ~y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVv~Vs~~~Y~-----~--C~~~~~i~~~~ssG 97 (217)
+..||.+ .+|.+.| ...++++||+|+|.+.. ..|+|...+....+ . +.. +. .....|
T Consensus 5 ~V~~~~~~~~~~F~P-----------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~-~~--~~~~pG 70 (106)
T 2gim_A 5 TVKLGSDKGLLVFEP-----------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSH-KQ--LLMSPG 70 (106)
T ss_dssp EEEESCTTCCSSEES-----------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCB-CS--CCCSTT
T ss_pred EEEEEecCCcceEcC-----------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccc-cc--eeeCCC
Confidence 3456643 5677763 35689999999999765 47999875422110 0 000 11 123344
Q ss_pred C-ceEEe---CCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 98 P-ANITL---DSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 98 ~-~~v~L---~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
. ..+++ +++|.|+|+|. .||+.||+..|.|.
T Consensus 71 ~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 71 QSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 4 47888 89999999999 89999999999996
No 14
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.91 E-value=6.5e-10 Score=82.49 Aligned_cols=90 Identities=20% Similarity=0.229 Sum_probs=60.2
Q ss_pred EEEecC-CCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCC-CCcEEEecCC---CCCCCCCCCCCCCCccCCCc-e
Q 036938 27 VHVVGD-SMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTN-EHDVLRVPKA---SYDGCTSSNPIGNPITTGPA-N 100 (217)
Q Consensus 27 ~y~VGg-~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVv~Vs~~---~Y~~C~~~~~i~~~~ssG~~-~ 100 (217)
+..+|+ +.++.+.| +..++++||+|+|.+... .|+|...+.. .++.+...... .....|.. .
T Consensus 3 ~V~m~~~~~~~~F~P-----------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~-~~~~~g~~~~ 70 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVP-----------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDD-YLNSKGETVV 70 (98)
T ss_dssp EEEESCTTSCCSEES-----------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEE-EECSTTCEEE
T ss_pred EEEEecCCCCcEEeC-----------CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccc-cccCCCCEEE
Confidence 344554 34577763 357899999999998763 7999875421 12211110000 12334543 7
Q ss_pred EEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 101 ITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 101 v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
++++++|.|+|+|.. ||++||+..|.|.
T Consensus 71 ~tf~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 71 RKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEcCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 899999999999995 9999999999984
No 15
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.89 E-value=5.3e-09 Score=76.81 Aligned_cols=73 Identities=25% Similarity=0.338 Sum_probs=52.4
Q ss_pred CCceeeCCEEEEEEeC-CCCcEEEecCCC---CCCCCCCCCCCCCccCC-CceEEeCCCCcEEEEcCCCCCCCCCCeEEE
Q 036938 53 TKNFVVGDVLTFNFVT-NEHDVLRVPKAS---YDGCTSSNPIGNPITTG-PANITLDSAGEHYYICTFGRHCQAGQKLAI 127 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~-~~HsVv~Vs~~~---Y~~C~~~~~i~~~~ssG-~~~v~L~~~G~~YFiC~v~gHC~~GmKl~I 127 (217)
..++++||+|+|.+.. ..|+|...+... .+.+... . .....| ...++++++|.|+|+|. .||+.||+..|
T Consensus 20 ~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~-~--~~~~~g~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i 94 (97)
T 1b3i_A 20 ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNT-K--LAIAPGSFYSVTLGTPGTYSFYCT--PHRGAGMVGTI 94 (97)
T ss_dssp EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBC-C--CCCSCSCCEEEECCSCSEEEEECS--STTTTTCEEEE
T ss_pred EEEECCCCEEEEEECCCCCeEEEEeCCCCcccccccccc-c--eecCCCCEEEEEeCCCeEEEEEcc--ChhhcCCEEEE
Confidence 5689999999999876 379998864321 0001011 1 123334 35789999999999999 89999999999
Q ss_pred Eee
Q 036938 128 TVS 130 (217)
Q Consensus 128 ~V~ 130 (217)
.|.
T Consensus 95 ~V~ 97 (97)
T 1b3i_A 95 TVE 97 (97)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 16
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.88 E-value=4.3e-09 Score=83.19 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=54.7
Q ss_pred cCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCC-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 52 ATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGP-ANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+..++++||+|+|.+....|+|...+. +...+........|. ..++++++|.|.|+|. .||..||+-.|.|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 367999999999999888899987532 222211101122333 4799999999999998 79999999999997
Q ss_pred C
Q 036938 131 A 131 (217)
Q Consensus 131 ~ 131 (217)
.
T Consensus 95 ~ 95 (124)
T 3ef4_A 95 K 95 (124)
T ss_dssp S
T ss_pred C
Confidence 6
No 17
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.87 E-value=2.8e-09 Score=84.38 Aligned_cols=75 Identities=21% Similarity=0.204 Sum_probs=54.9
Q ss_pred cCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCC-CceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 52 ATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTG-PANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG-~~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+..++++||+|+|.+....|+|...+. +............| ...++++++|.|+|+|. .||..||+..|.|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 467999999999999877899987532 11111110011123 34899999999999999 69999999999998
Q ss_pred CCC
Q 036938 131 ATP 133 (217)
Q Consensus 131 ~~~ 133 (217)
.++
T Consensus 96 ~~~ 98 (127)
T 3tu6_A 96 EPA 98 (127)
T ss_dssp SCT
T ss_pred cCC
Confidence 643
No 18
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.86 E-value=2.6e-09 Score=84.12 Aligned_cols=71 Identities=20% Similarity=0.217 Sum_probs=54.1
Q ss_pred cCCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCcc--CC-CceEEeCCCCcEEEEcCCCCCCCCCCeEEEE
Q 036938 52 ATKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPIT--TG-PANITLDSAGEHYYICTFGRHCQAGQKLAIT 128 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~s--sG-~~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~ 128 (217)
+..++++||+|+|.+....|+|...+. |...+. ..+. .| ...++++++|.|+|+|. .||..||+-.|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~--~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~ 91 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGV--ESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQ 91 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTC--CCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCc--cceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEE
Confidence 467999999999999887799987432 222111 1122 23 34789999999999999 899999999999
Q ss_pred eeC
Q 036938 129 VSA 131 (217)
Q Consensus 129 V~~ 131 (217)
|..
T Consensus 92 V~~ 94 (123)
T 3erx_A 92 VGD 94 (123)
T ss_dssp ESS
T ss_pred ECC
Confidence 985
No 19
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.85 E-value=5e-09 Score=77.61 Aligned_cols=90 Identities=19% Similarity=0.259 Sum_probs=60.0
Q ss_pred EEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeC-CCCcEEEecCCCCC----CCCCCCCC---CCCccCCC
Q 036938 28 HVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT-NEHDVLRVPKASYD----GCTSSNPI---GNPITTGP 98 (217)
Q Consensus 28 y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVv~Vs~~~Y~----~C~~~~~i---~~~~ssG~ 98 (217)
..||++ .++.+.| ...++++||+|+|.+.. ..|+|+....+.++ .|+....+ ......|.
T Consensus 3 V~~g~~~~~~~F~P-----------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~ 71 (102)
T 1kdj_A 3 VEVGDEVGNFKFYP-----------DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEP 71 (102)
T ss_dssp EEESCTTCCCCEES-----------SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBC
T ss_pred EEEecCCCccEEeC-----------CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCC
Confidence 456753 4466653 35689999999999765 37999876433221 01000000 01233443
Q ss_pred -ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 99 -ANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 99 -~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
..++++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 ~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 72 SFKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 4788899999999999 99999999999984
No 20
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.80 E-value=1.2e-08 Score=75.20 Aligned_cols=89 Identities=22% Similarity=0.273 Sum_probs=59.9
Q ss_pred EEecC-CCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCC-CCcEEEecCC---CCCCCCCC--CCCCCCccCCC-c
Q 036938 28 HVVGD-SMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTN-EHDVLRVPKA---SYDGCTSS--NPIGNPITTGP-A 99 (217)
Q Consensus 28 y~VGg-~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVv~Vs~~---~Y~~C~~~--~~i~~~~ssG~-~ 99 (217)
..||+ +.++.+.| +..++++||+|+|++... .|+|...+.. .++.+... ... .....|. .
T Consensus 3 V~~~~~~~~~~F~P-----------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~-~~~~~G~~~ 70 (99)
T 1byp_A 3 VLLGSSDGGLAFVP-----------SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEED-LLNAPGEEY 70 (99)
T ss_dssp EEESCTTSCCSEES-----------SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTC-CBCSTTCEE
T ss_pred EEEecCCCcceEeC-----------CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccc-eeeCCCCEE
Confidence 45654 34566653 346899999999988764 7999876421 12211100 000 1234454 4
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
.++++++|.|.|+|. .||+.||+..|.|.
T Consensus 71 ~~~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 71 SVTLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 789999999999999 89999999999984
No 21
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=2.4e-09 Score=78.70 Aligned_cols=90 Identities=21% Similarity=0.218 Sum_probs=60.0
Q ss_pred EEEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCC-CCcEEEecCC---CCCCCCCCCCCCCCccCCC-ce
Q 036938 27 VHVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTN-EHDVLRVPKA---SYDGCTSSNPIGNPITTGP-AN 100 (217)
Q Consensus 27 ~y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVv~Vs~~---~Y~~C~~~~~i~~~~ssG~-~~ 100 (217)
+..+|++ .++.+.| ...++++||+|+|++... .|+|...+.. .++.+...... .....|. ..
T Consensus 3 ~V~m~~~~~~~~F~P-----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~-~~~~pG~~~~ 70 (98)
T 2plt_A 3 TVKLGADSGALEFVP-----------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDD-YLNAPGETYS 70 (98)
T ss_dssp EEEESCTTCCSSEES-----------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEE-EECSTTCEEE
T ss_pred EEEEecCCCCceEeC-----------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccc-eecCCCCEEE
Confidence 4556643 4577663 246899999999988764 7999876421 11211000000 1233454 37
Q ss_pred EEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 101 ITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 101 v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
++++++|.|+|+|. .||+.||+..|.|.
T Consensus 71 ~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 71 VKLTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EECCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred EEeCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 88999999999999 79999999999984
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=2.7e-08 Score=73.12 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=58.7
Q ss_pred EEEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeC-CCCcEEEecCCCC--CCCCCCCCCCCCccCCC-ceE
Q 036938 27 VHVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT-NEHDVLRVPKASY--DGCTSSNPIGNPITTGP-ANI 101 (217)
Q Consensus 27 ~y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVv~Vs~~~Y--~~C~~~~~i~~~~ssG~-~~v 101 (217)
+..+|.+ .++.+.| ...++++||+|+|.+.. ..|+|...+...- +..+..... .....|. ..+
T Consensus 4 ~V~~~~~~~~~~F~P-----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~-~~~~pG~~~~~ 71 (98)
T 1pcs_A 4 TVKMGSDSGALVFEP-----------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKG-LLFAAGESFTS 71 (98)
T ss_dssp EEEESCTTSCSSEES-----------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEE-EECSTTCEEEE
T ss_pred EEEEecCCCccEEeC-----------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccc-cccCCCCEEEE
Confidence 3456643 4566653 34689999999999865 4799987532100 000000000 1233444 478
Q ss_pred EeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 102 TLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 102 ~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
+++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 72 TFTEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp ECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EcCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 8899999999999 79999999999984
No 23
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.46 E-value=1.7e-07 Score=73.79 Aligned_cols=71 Identities=18% Similarity=0.132 Sum_probs=48.5
Q ss_pred cCCceeeCCEEEEEEeCC-CCcEEEecCCCCCCCCCCCCCCCCccCCC-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEe
Q 036938 52 ATKNFVVGDVLTFNFVTN-EHDVLRVPKASYDGCTSSNPIGNPITTGP-ANITLDSAGEHYYICTFGRHCQAGQKLAITV 129 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~-~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V 129 (217)
+..++++||+|.|..... .|+|...+...- .=.+.. ..+..|. ..++++++|.|.|+|.. |. ||+..|.|
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g-~~~~~s---~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVG-EDAFRG---EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSS-SSCEEC---CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCC-cccccc---cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 356899999999987654 699987542210 000000 1233443 47888999999999996 76 99999988
Q ss_pred e
Q 036938 130 S 130 (217)
Q Consensus 130 ~ 130 (217)
.
T Consensus 132 ~ 132 (132)
T 3c75_A 132 E 132 (132)
T ss_dssp C
T ss_pred C
Confidence 4
No 24
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.31 E-value=1.6e-06 Score=71.80 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=60.5
Q ss_pred eEEEecCCCCCCCCCCCCCCCccccccCCce-eeCCEEEEEEeC--C------CCcEEEecCC---------------CC
Q 036938 26 TVHVVGDSMGWSIPTSGGAGAYNNWAATKNF-VVGDVLTFNFVT--N------EHDVLRVPKA---------------SY 81 (217)
Q Consensus 26 ~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF-~VGDtLvF~y~~--~------~HsVv~Vs~~---------------~Y 81 (217)
.++.|+.++++.|.+ +..++ +.||.+.|.|.+ . .|+++..+.. +|
T Consensus 43 ~~V~I~~~d~m~F~P-----------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~ 111 (167)
T 3ay2_A 43 CAATVESNDNMQFNT-----------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDY 111 (167)
T ss_dssp CEEEEEECTTSCBSC-----------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTT
T ss_pred eEEEEEeCCCceEec-----------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccc
Confidence 456777666788773 24567 779987777643 2 2999887543 22
Q ss_pred CCCCCCCCC--CCCccCCCc-eEEeC----CCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 82 DGCTSSNPI--GNPITTGPA-NITLD----SAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 82 ~~C~~~~~i--~~~~ssG~~-~v~L~----~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
..=+-.+.+ ......|.. .|+++ ++|.|+|+|++++|=+ |||-.|.|.
T Consensus 112 v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 112 VKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ccccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 211111100 023344543 56665 7999999999999998 999999986
No 25
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.27 E-value=7.8e-06 Score=64.57 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=59.2
Q ss_pred EEEecCCCCCCCCCCCCCCCccccccCCceeeC-CEEEEEEeC-C-------CCcEEEecCC----------------CC
Q 036938 27 VHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVG-DVLTFNFVT-N-------EHDVLRVPKA----------------SY 81 (217)
Q Consensus 27 ~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VG-DtLvF~y~~-~-------~HsVv~Vs~~----------------~Y 81 (217)
+..|+.++.+.+.+ +..+++.| |.+.|.+.+ + .|+++..+.. +|
T Consensus 4 ~v~i~~~d~m~F~p-----------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~ 72 (129)
T 1cuo_A 4 ETTVTSGDTMTYST-----------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNF 72 (129)
T ss_dssp EEEEEECSSSCCSC-----------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTT
T ss_pred EEEEEeCCCceEcc-----------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccc
Confidence 34455555677763 35688999 977777754 2 3999887533 23
Q ss_pred CCCCCCCCC--CCCccCCCc-eEEeC-----CCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 82 DGCTSSNPI--GNPITTGPA-NITLD-----SAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 82 ~~C~~~~~i--~~~~ssG~~-~v~L~-----~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
..=+-.+.+ ......|.. .++++ ++|.|+|+|++++|=+ |||-.|.|.
T Consensus 73 v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 73 VTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp SCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred cccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 211111111 023345543 45554 7999999999999999 899999986
No 26
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.24 E-value=1.2e-06 Score=68.30 Aligned_cols=70 Identities=17% Similarity=0.142 Sum_probs=50.0
Q ss_pred CCceeeCCEEEEEEeCCCCcEEEecCCCCCCCCCCCCCCCCccCCC-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeC
Q 036938 53 TKNFVVGDVLTFNFVTNEHDVLRVPKASYDGCTSSNPIGNPITTGP-ANITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~ 131 (217)
..++++||+|.|.+....|+|+..+. |-...........|. ..++++++|.|+|+|.. |+. |+..|.|..
T Consensus 22 ~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 56899999999999777899987531 211111100111232 47899999999999996 887 999999975
No 27
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.20 E-value=1.8e-06 Score=63.54 Aligned_cols=88 Identities=25% Similarity=0.232 Sum_probs=57.4
Q ss_pred EEEecCC-CCCCCCCCCCCCCccccccCCceeeCCEEEEEEeC-CCCcEEEecCCCCCCCCC-------CCCCCCCccCC
Q 036938 27 VHVVGDS-MGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVT-NEHDVLRVPKASYDGCTS-------SNPIGNPITTG 97 (217)
Q Consensus 27 ~y~VGg~-~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVv~Vs~~~Y~~C~~-------~~~i~~~~ssG 97 (217)
+..||.+ .+..+.+ ...++++||+|+|.... ..|+|..-... ..+.. .... .....|
T Consensus 4 ~V~~~~~~~~~~f~p-----------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~-~~i~pG 69 (105)
T 3cvb_A 4 TVKMGADSGLFQFEP-----------ANVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQ-LMFSPG 69 (105)
T ss_dssp EEEESCTTCCSCEES-----------SEEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEE-EECSTT
T ss_pred EEEEeecCCccEEeC-----------CEEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccc-cccCCC
Confidence 3456643 5666663 24689999999998764 46998774321 11100 0000 112334
Q ss_pred C-ceEEe---CCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 98 P-ANITL---DSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 98 ~-~~v~L---~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
. ..+++ +++|+|+|+|. .|++.||+..|.|.
T Consensus 70 ~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 70 ESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp CEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 3 36777 78999999999 79999999999985
No 28
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.16 E-value=3.2e-06 Score=63.42 Aligned_cols=84 Identities=24% Similarity=0.213 Sum_probs=56.5
Q ss_pred ccceEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEEeCC-CCcEEEecCCC----CCCCCCCCCCCCCccCC
Q 036938 23 AAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNFVTN-EHDVLRVPKAS----YDGCTSSNPIGNPITTG 97 (217)
Q Consensus 23 a~A~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVv~Vs~~~----Y~~C~~~~~i~~~~ssG 97 (217)
+.+.+|.|-- .+|.+.| ...++++||+|+|..... .|+|...+..+ |+. .....|
T Consensus 16 ~~a~~~~V~~-~~~~F~P-----------~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~--------~~~~pG 75 (105)
T 2ov0_A 16 VADGAIVVDI-AKMKYET-----------PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKG--------PMMKKE 75 (105)
T ss_dssp CCTTCEEEEE-ETTEESS-----------SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC--------CCBCTT
T ss_pred CCCcCEEEEE-eecEEcC-----------CEEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccc--------cccCCC
Confidence 3455565543 3466663 356899999999987654 79998653211 111 123334
Q ss_pred C-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 98 P-ANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 98 ~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
. ..++++++|.|+|+|.. |. ||+..|.|.
T Consensus 76 ~~~~~tf~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 76 QAYSLTFTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp EEEEEEECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 3 47888999999999997 54 999999884
No 29
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.12 E-value=5e-07 Score=67.07 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=46.7
Q ss_pred cCCceeeCCEEEEEEeCC---CCcEEEecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCCCCCeE
Q 036938 52 ATKNFVVGDVLTFNFVTN---EHDVLRVPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQAGQKL 125 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~---~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~GmKl 125 (217)
+..++++||++.|.+.+. .|++..-+.. .+ .....|. ..++.+++|.|.|+|. .||..||+-
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~-~~---------~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G 95 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLG-ID---------VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEG 95 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGT-EE---------EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCC-cc---------eeecCCcceeEEEecccCceEEEECc--cccCCCCEE
Confidence 357999999999988543 4666542211 00 1222343 2466689999999997 699999999
Q ss_pred EEEee
Q 036938 126 AITVS 130 (217)
Q Consensus 126 ~I~V~ 130 (217)
.|.|+
T Consensus 96 ~i~Ve 100 (100)
T 4hci_A 96 KVIVK 100 (100)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 30
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.09 E-value=6.8e-06 Score=61.87 Aligned_cols=70 Identities=19% Similarity=0.152 Sum_probs=48.0
Q ss_pred CCceeeCCEEEEEEeCC-CCcEEEecCCCCCCCCCCCCCCCCccCCC-ceEEeCCCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 53 TKNFVVGDVLTFNFVTN-EHDVLRVPKASYDGCTSSNPIGNPITTGP-ANITLDSAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~-~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~-~~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
..++++||+|.|..... .|+|+..+... ..-.+.. ..+..|. ..++++++|.|.|+|.. |. ||+..|.|.
T Consensus 35 ~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s---~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 35 EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG---EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC---CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCCC-Ccccccc---cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 56899999999997654 69997653220 0000000 1233443 47889999999999997 77 999999884
No 31
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.04 E-value=2.6e-05 Score=61.50 Aligned_cols=91 Identities=20% Similarity=0.275 Sum_probs=56.2
Q ss_pred EEecCCCCCCCCCCCCCCCccccccCCce-eeCCEEEEEEeCC--------CCcEEEecCC----------------CCC
Q 036938 28 HVVGDSMGWSIPTSGGAGAYNNWAATKNF-VVGDVLTFNFVTN--------EHDVLRVPKA----------------SYD 82 (217)
Q Consensus 28 y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF-~VGDtLvF~y~~~--------~HsVv~Vs~~----------------~Y~ 82 (217)
..|+.++++.+.| +..++ +.||.+.|.|.+. .|+++..+.. +|.
T Consensus 4 v~v~~~d~m~F~p-----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~ 72 (128)
T 2iaa_C 4 VSIEGNDSMQFNT-----------KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYV 72 (128)
T ss_dssp EEEEECTTSCBSC-----------SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTS
T ss_pred EEEEeCCCceEec-----------CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccc
Confidence 4455556777763 23455 5599777777542 2999877532 232
Q ss_pred CCCCCCCC--CCCccCCCc-eEEeC----CCC-cEEEEcCCCCCCCCCCeEEEEee
Q 036938 83 GCTSSNPI--GNPITTGPA-NITLD----SAG-EHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 83 ~C~~~~~i--~~~~ssG~~-~v~L~----~~G-~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
.=+-.+.+ ......|.. .++++ ++| .|.|+|++++|=+ |||-.|.|.
T Consensus 73 ~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 73 KAGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 21111100 023445543 55554 678 4999999999999 999999985
No 32
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.93 E-value=3.8e-05 Score=60.56 Aligned_cols=92 Identities=20% Similarity=0.269 Sum_probs=55.8
Q ss_pred EEEecCCCCCCCCCCCCCCCccccccCCce-eeCCEEEEEEeC--C------CCcEEEecCC----------------CC
Q 036938 27 VHVVGDSMGWSIPTSGGAGAYNNWAATKNF-VVGDVLTFNFVT--N------EHDVLRVPKA----------------SY 81 (217)
Q Consensus 27 ~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF-~VGDtLvF~y~~--~------~HsVv~Vs~~----------------~Y 81 (217)
+..|+.++++.+.+ +..++ +.||.+.|.+.+ . .|+++..+.. +|
T Consensus 4 ~v~v~~~d~m~F~p-----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~ 72 (129)
T 2ccw_A 4 EATVESNDAMQYNV-----------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDY 72 (129)
T ss_dssp EEEEEECTTSCBSC-----------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTT
T ss_pred EEEEEeCCCccEec-----------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccc
Confidence 44566555677763 23345 559977777754 2 3999987533 23
Q ss_pred CCCCCCCCC--CCCccCCCc-eEEeC----CCCc-EEEEcCCCCCCCCCCeEEEEee
Q 036938 82 DGCTSSNPI--GNPITTGPA-NITLD----SAGE-HYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 82 ~~C~~~~~i--~~~~ssG~~-~v~L~----~~G~-~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
..=+-.+.+ ......|.. .++++ ++|. |+|+|++++|=+ |||-.|.|.
T Consensus 73 ~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 73 VKAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred cccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 221111100 023345543 45554 5665 999999999998 999999985
No 33
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.93 E-value=3.3e-05 Score=60.97 Aligned_cols=92 Identities=22% Similarity=0.269 Sum_probs=57.3
Q ss_pred EEEecCCCCCCCCCCCCCCCccccccCCce-eeCCEEEEEEeCC--C------CcEEEecCC----------------CC
Q 036938 27 VHVVGDSMGWSIPTSGGAGAYNNWAATKNF-VVGDVLTFNFVTN--E------HDVLRVPKA----------------SY 81 (217)
Q Consensus 27 ~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF-~VGDtLvF~y~~~--~------HsVv~Vs~~----------------~Y 81 (217)
+..|+.++++.+.| +..++ +.||.+.|.|.+. . |+++..+.. +|
T Consensus 4 ~v~v~~~d~m~F~p-----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~ 72 (128)
T 1nwp_A 4 KVTVDSTDQMSFNT-----------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQY 72 (128)
T ss_dssp EEEEEECTTSCBSC-----------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTT
T ss_pred EEEEEeCCCccEec-----------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccc
Confidence 45566556788773 24567 7899877777542 2 999886432 12
Q ss_pred CCCCCCCCC--CCCccCCCc-eEEeC----CCCc-EEEEcCCCCCCCCCCeEEEEee
Q 036938 82 DGCTSSNPI--GNPITTGPA-NITLD----SAGE-HYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 82 ~~C~~~~~i--~~~~ssG~~-~v~L~----~~G~-~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
..=+-.+.+ ......|.. .++++ ++|. |.|+|++++|=+ |||-.|.|.
T Consensus 73 ~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 73 LKDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred cccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 111111100 023445543 55554 5676 999999999999 999999884
No 34
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=97.56 E-value=8.6e-05 Score=62.14 Aligned_cols=78 Identities=23% Similarity=0.347 Sum_probs=50.0
Q ss_pred CceeeCCEEEEEE---e-------CCCCcEEEecCCCCCCCCCCCCCCCCc------c-CCCceEEeC------------
Q 036938 54 KNFVVGDVLTFNF---V-------TNEHDVLRVPKASYDGCTSSNPIGNPI------T-TGPANITLD------------ 104 (217)
Q Consensus 54 ktF~VGDtLvF~y---~-------~~~HsVv~Vs~~~Y~~C~~~~~i~~~~------s-sG~~~v~L~------------ 104 (217)
..+++||.|-+-- . .+...+++|++++|++|+..+.....+ . .|..++++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 4688999998763 3 135678899999999998754320111 1 133333222
Q ss_pred -CCC-cEEEEcCC-----CCCCCCCCeEEEEeeCCCC
Q 036938 105 -SAG-EHYYICTF-----GRHCQAGQKLAITVSATPG 134 (217)
Q Consensus 105 -~~G-~~YFiC~v-----~gHC~~GmKl~I~V~~~~~ 134 (217)
++| .||||++- ++-| |||+|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 467 68899753 2345 999999986543
No 35
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.46 E-value=1.7e-05 Score=66.52 Aligned_cols=79 Identities=22% Similarity=0.249 Sum_probs=52.8
Q ss_pred ceeeCCEEEEEEe---------CCCCcEEEecCCCCCCCCCCCCCCCCc--c--CCCceEEeC-------------CCC-
Q 036938 55 NFVVGDVLTFNFV---------TNEHDVLRVPKASYDGCTSSNPIGNPI--T--TGPANITLD-------------SAG- 107 (217)
Q Consensus 55 tF~VGDtLvF~y~---------~~~HsVv~Vs~~~Y~~C~~~~~i~~~~--s--sG~~~v~L~-------------~~G- 107 (217)
..++||.|-|--. .+.+.|++|++++|+.|+........+ + .+...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 3466999988642 234789999999999998763210122 1 122333332 367
Q ss_pred cEEEEcCCC-----------CCCCC-CCeEEEEeeCCC
Q 036938 108 EHYYICTFG-----------RHCQA-GQKLAITVSATP 133 (217)
Q Consensus 108 ~~YFiC~v~-----------gHC~~-GmKl~I~V~~~~ 133 (217)
.|||||.-. |+|.. +|||.|.|...+
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~ 142 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDA 142 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC-
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCC
Confidence 899999853 78996 999999997644
No 36
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=97.16 E-value=0.00057 Score=57.38 Aligned_cols=106 Identities=21% Similarity=0.289 Sum_probs=57.1
Q ss_pred hhcccceEEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEEE---eC--------CCCcEEEecCCCCCCCCCCC
Q 036938 20 ECAAAQTVHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFNF---VT--------NEHDVLRVPKASYDGCTSSN 88 (217)
Q Consensus 20 ~~~a~A~~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~y---~~--------~~HsVv~Vs~~~Y~~C~~~~ 88 (217)
+..+++..|.|= |+...+ ..... --...+++||.|-+-- .. +...+++|++++|+.|+...
T Consensus 24 ~~~~sa~rh~Vy----WNSsNp---~F~~~-~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~ 95 (182)
T 3czu_B 24 GAMDAADRHTVF----WNSSNP---KFRNE-DYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 95 (182)
T ss_dssp -----CCEEEEE----CSTTCG---GGTTS-CCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCC
T ss_pred hhhhhccccceE----EcCCCc---cccCC-CceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCC
Confidence 334455666664 886421 11111 1235678999998763 21 24678899999999998753
Q ss_pred CCCCCc------c-CCCceEEeC-------------CCC-cEEEEcC----CCCCCCCCCeEEEEeeCCCCCC
Q 036938 89 PIGNPI------T-TGPANITLD-------------SAG-EHYYICT----FGRHCQAGQKLAITVSATPGPS 136 (217)
Q Consensus 89 ~i~~~~------s-sG~~~v~L~-------------~~G-~~YFiC~----v~gHC~~GmKl~I~V~~~~~~~ 136 (217)
.....+ . -|..+|++. ++| .||||+. .+|.| |||.|.|.......
T Consensus 96 ~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~GlEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~~~ 165 (182)
T 3czu_B 96 KDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKITHS 165 (182)
T ss_dssp GGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSCCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC-----
T ss_pred CCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCeeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCCCC
Confidence 110111 1 122222211 467 7889986 34666 99999998655433
No 37
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=96.86 E-value=0.00053 Score=55.41 Aligned_cols=75 Identities=21% Similarity=0.222 Sum_probs=49.8
Q ss_pred CceeeCCEEEEEE---eC---------CCCcEEEecCCCCCCCCCCC-CCCCCcc----CCCce--------------EE
Q 036938 54 KNFVVGDVLTFNF---VT---------NEHDVLRVPKASYDGCTSSN-PIGNPIT----TGPAN--------------IT 102 (217)
Q Consensus 54 ktF~VGDtLvF~y---~~---------~~HsVv~Vs~~~Y~~C~~~~-~i~~~~s----sG~~~--------------v~ 102 (217)
..+++||.|-+-- .. +...+++|++++|+.|+... +. ..+. .+..+ ++
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~-~~~~C~~P~~~~kft~kFq~fsP~p~G~E 100 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPN-LLLTCDRPDLDLRFTIKFQEYSPNLWGHE 100 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCE-EEEECCCSSSCEEEEEESSSCCSCCSCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCe-EEEEeCCCCCCeEEEEEEEEcCCCCCcee
Confidence 3678899998764 22 35678999999999998752 21 1111 12222 23
Q ss_pred eCCCC-cEEEEcCC-----------CCCCCC-CCeEEEEee
Q 036938 103 LDSAG-EHYYICTF-----------GRHCQA-GQKLAITVS 130 (217)
Q Consensus 103 L~~~G-~~YFiC~v-----------~gHC~~-GmKl~I~V~ 130 (217)
+ ++| .||||++- +|-|.. .|||.|.|.
T Consensus 101 F-~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 101 F-RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp C-CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred e-eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 3 456 78999863 467885 899999995
No 38
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.76 E-value=0.002 Score=51.84 Aligned_cols=77 Identities=23% Similarity=0.350 Sum_probs=49.2
Q ss_pred CceeeCCEEEEEE---e-------CCCCcEEEecCCCCCCCCCCCCCCCCc------c-CCCceEEeC------------
Q 036938 54 KNFVVGDVLTFNF---V-------TNEHDVLRVPKASYDGCTSSNPIGNPI------T-TGPANITLD------------ 104 (217)
Q Consensus 54 ktF~VGDtLvF~y---~-------~~~HsVv~Vs~~~Y~~C~~~~~i~~~~------s-sG~~~v~L~------------ 104 (217)
..+++||.|-+-- . .+...+++|++++|+.|+........+ . .|..++++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 4678899998763 3 135678899999999998754220111 1 133333222
Q ss_pred -CCC-cEEEEcCC-----CCCCCCCCeEEEEeeCCC
Q 036938 105 -SAG-EHYYICTF-----GRHCQAGQKLAITVSATP 133 (217)
Q Consensus 105 -~~G-~~YFiC~v-----~gHC~~GmKl~I~V~~~~ 133 (217)
++| .||||++- ++-| |||+|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 467 68899753 3446 99999997643
No 39
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.75 E-value=0.00053 Score=55.27 Aligned_cols=76 Identities=24% Similarity=0.290 Sum_probs=49.7
Q ss_pred ceeeCCEEEEEEeC---------CCCcEEEecCCCCCCCCCCCCCCCCcc----CCCceEEeC-------------CCC-
Q 036938 55 NFVVGDVLTFNFVT---------NEHDVLRVPKASYDGCTSSNPIGNPIT----TGPANITLD-------------SAG- 107 (217)
Q Consensus 55 tF~VGDtLvF~y~~---------~~HsVv~Vs~~~Y~~C~~~~~i~~~~s----sG~~~v~L~-------------~~G- 107 (217)
..+.||.|-|--.. +...+++|++++|+.|+........+. .+...+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34679999887532 257788999999999987632202221 222333222 467
Q ss_pred cEEEEcCC-----------CCCCCC-CCeEEEEee
Q 036938 108 EHYYICTF-----------GRHCQA-GQKLAITVS 130 (217)
Q Consensus 108 ~~YFiC~v-----------~gHC~~-GmKl~I~V~ 130 (217)
.||||+.- +|-|.. .|||.|.|.
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~ 138 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVG 138 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEET
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEec
Confidence 68899873 357885 899999996
No 40
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.72 E-value=0.0024 Score=50.47 Aligned_cols=66 Identities=18% Similarity=0.243 Sum_probs=45.6
Q ss_pred CCceeeCCEEEEEEeCC--CCcEEEecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCC---CCCe
Q 036938 53 TKNFVVGDVLTFNFVTN--EHDVLRVPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQ---AGQK 124 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~--~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~---~GmK 124 (217)
...+.+||.+.|...+. .|++..-+. ..+ .....|. ..++++++|.|+|+|.. +|. .+|+
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~-~~k---------~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~ 128 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGT-NIN---------VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 128 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTS-SCE---------EEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCC-Cce---------eEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCE
Confidence 56899999999999653 466653211 100 1112343 46889999999999985 454 6899
Q ss_pred EEEEee
Q 036938 125 LAITVS 130 (217)
Q Consensus 125 l~I~V~ 130 (217)
..|.|.
T Consensus 129 g~v~V~ 134 (135)
T 2cua_A 129 GTIVVK 134 (135)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
No 41
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.62 E-value=0.003 Score=47.10 Aligned_cols=66 Identities=18% Similarity=0.189 Sum_probs=44.6
Q ss_pred CCceeeCCEEEEEEeCC---CCcEEEecCCCCCCCCCCCCCCCCccCCCc-eEEe--CCCCcEEEEcCCCCCCCC-CCeE
Q 036938 53 TKNFVVGDVLTFNFVTN---EHDVLRVPKASYDGCTSSNPIGNPITTGPA-NITL--DSAGEHYYICTFGRHCQA-GQKL 125 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~---~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~-~v~L--~~~G~~YFiC~v~gHC~~-GmKl 125 (217)
..++++||.+.|.+.+. .|++..-+. .. . .....|.. .+++ +++|.|+|.|.. ||.. +|+.
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~-~~--------~-~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g 106 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF-GV--------Q-EVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPG 106 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG-TE--------E-EEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC-Cc--------e-eEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEE
Confidence 46899999999987543 577654221 10 1 12334443 4555 899999999996 7753 4999
Q ss_pred EEEee
Q 036938 126 AITVS 130 (217)
Q Consensus 126 ~I~V~ 130 (217)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
No 42
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.32 E-value=0.034 Score=43.83 Aligned_cols=73 Identities=19% Similarity=0.269 Sum_probs=43.9
Q ss_pred Cceee-CCEEEEEEeC-C-------CCcEEEecC----------------CCCCCCCCCCCC--CCCccCCCc-eEEeC-
Q 036938 54 KNFVV-GDVLTFNFVT-N-------EHDVLRVPK----------------ASYDGCTSSNPI--GNPITTGPA-NITLD- 104 (217)
Q Consensus 54 ktF~V-GDtLvF~y~~-~-------~HsVv~Vs~----------------~~Y~~C~~~~~i--~~~~ssG~~-~v~L~- 104 (217)
.++.. |+++.|.+.+ + .||++.... .+|-.=+-.+.+ ...+..|.. .++++
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf~~ 99 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDV 99 (125)
T ss_dssp EEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEEEG
T ss_pred EEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEEeC
Confidence 44543 9998777754 2 399998631 133321111111 023455653 45555
Q ss_pred ----CCCcEEEEcCCCCCCCCCCeEEEEee
Q 036938 105 ----SAGEHYYICTFGRHCQAGQKLAITVS 130 (217)
Q Consensus 105 ----~~G~~YFiC~v~gHC~~GmKl~I~V~ 130 (217)
++|.|-|+|+ +|= |||-.|.|.
T Consensus 100 ~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 100 SKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp GGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 5699999999 887 999999884
No 43
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=95.65 E-value=0.0099 Score=54.09 Aligned_cols=75 Identities=24% Similarity=0.299 Sum_probs=52.7
Q ss_pred cCCceeeCCEEEEEEeCC---CCcEEEecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCCCCCeE
Q 036938 52 ATKNFVVGDVLTFNFVTN---EHDVLRVPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQAGQKL 125 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~---~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~GmKl 125 (217)
...+++.||+|+|++.+. .|++..-.......|- ...|. -.|+++++|+|+|.|.+.+|=..||+.
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~--------i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G 126 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV--------NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEG 126 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB--------CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee--------cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEE
Confidence 457899999999998653 3777542222222231 22343 256668899999999999998889999
Q ss_pred EEEeeCCCC
Q 036938 126 AITVSATPG 134 (217)
Q Consensus 126 ~I~V~~~~~ 134 (217)
.|.|.....
T Consensus 127 ~i~V~~~~~ 135 (447)
T 2dv6_A 127 NIQVLPGNR 135 (447)
T ss_dssp EEEEESSCC
T ss_pred EEEEeCCcc
Confidence 999987543
No 44
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.53 E-value=0.023 Score=46.74 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=44.0
Q ss_pred cCCceeeCCEEEEEEeCC--CCcEEEecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCCC---CC
Q 036938 52 ATKNFVVGDVLTFNFVTN--EHDVLRVPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQA---GQ 123 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~--~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~---Gm 123 (217)
+...+.+|+.+.|...+. .|+...-+. .. . ...-.|. ..++.+++|.|||+|.. .|.. +|
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP~l-gi--------k-~da~PG~~n~~~~~~~kpG~y~g~Cse--~CG~~Hs~M 160 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVEGT-NI--------N-VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNM 160 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEETTS-SC--------E-EEECTTBCEEEEEECCSCEEEEEECCS--CCSTTGGGC
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEECCC-Ce--------E-EEecCCceeEEEEEeCCCEEEEEECCc--CCCCCcCCC
Confidence 446788999999988753 455543211 00 0 0111343 46788999999999994 5654 59
Q ss_pred eEEEEee
Q 036938 124 KLAITVS 130 (217)
Q Consensus 124 Kl~I~V~ 130 (217)
+..|.|.
T Consensus 161 ~g~V~V~ 167 (168)
T 3s8f_B 161 FGTIVVK 167 (168)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999986
No 45
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=93.92 E-value=0.055 Score=44.31 Aligned_cols=76 Identities=21% Similarity=0.309 Sum_probs=47.2
Q ss_pred CceeeCCEEEEEEeC-----------CCCcEEEecCCCCCCCCCCCCCCCCc-------cCCCceE--------------
Q 036938 54 KNFVVGDVLTFNFVT-----------NEHDVLRVPKASYDGCTSSNPIGNPI-------TTGPANI-------------- 101 (217)
Q Consensus 54 ktF~VGDtLvF~y~~-----------~~HsVv~Vs~~~Y~~C~~~~~i~~~~-------ssG~~~v-------------- 101 (217)
..+++||.|-+--.. +...+++|++++|+.|+........+ ..|..++
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 457889999886422 23458899999999998754220111 0122222
Q ss_pred EeCCCC-cEEEEcCC-----CCCCCCCCeEEEEeeCCC
Q 036938 102 TLDSAG-EHYYICTF-----GRHCQAGQKLAITVSATP 133 (217)
Q Consensus 102 ~L~~~G-~~YFiC~v-----~gHC~~GmKl~I~V~~~~ 133 (217)
++ ++| .||||++- ++-| |||.|.|....
T Consensus 112 EF-~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~ 145 (157)
T 2wo3_B 112 EF-RPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQ 145 (157)
T ss_dssp CC-CTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC
T ss_pred ee-eCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCC
Confidence 22 466 79999864 3456 58888887543
No 46
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=93.30 E-value=0.082 Score=42.13 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=45.7
Q ss_pred CceeeCCEEEEEEeC-----------CCCcEEEecCCCCCCCCCCCCCCCCc------c-CCCceEEeC-----------
Q 036938 54 KNFVVGDVLTFNFVT-----------NEHDVLRVPKASYDGCTSSNPIGNPI------T-TGPANITLD----------- 104 (217)
Q Consensus 54 ktF~VGDtLvF~y~~-----------~~HsVv~Vs~~~Y~~C~~~~~i~~~~------s-sG~~~v~L~----------- 104 (217)
..+++||.|-+--.. +...++.|++++|+.|+........+ . .|..++++.
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~ 101 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 101 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCe
Confidence 467889999875422 24567899999999998754210111 1 233333221
Q ss_pred --CCC-cEEEEcCCCCCCCC-CCeEEEEee
Q 036938 105 --SAG-EHYYICTFGRHCQA-GQKLAITVS 130 (217)
Q Consensus 105 --~~G-~~YFiC~v~gHC~~-GmKl~I~V~ 130 (217)
++| .||||++-..|=.. =+||.|.|.
T Consensus 102 EF~pG~~YY~ISt~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 102 EFKEGHSYYYISKPIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCTTCEEEEEEEESSCCCCSCCEEEEEEC
T ss_pred eecCCCcEEEEEccCCCCCCcceEEEEEEE
Confidence 456 68888873222111 178888874
No 47
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.11 E-value=0.1 Score=50.98 Aligned_cols=68 Identities=21% Similarity=0.356 Sum_probs=46.7
Q ss_pred cCCceeeCCEEEEEEeCC------CCcEEEecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCCCC
Q 036938 52 ATKNFVVGDVLTFNFVTN------EHDVLRVPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQAG 122 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~------~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~G 122 (217)
...++.+||.+.|...+. .|++..-+. . +......|. ..++.+++|.|||+|+. +|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---G-------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~ 625 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---G-------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHAL 625 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---T-------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTT
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCC---C-------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCC
Confidence 356899999999988762 577654221 0 101122343 36778999999999996 66654
Q ss_pred ---CeEEEEeeC
Q 036938 123 ---QKLAITVSA 131 (217)
Q Consensus 123 ---mKl~I~V~~ 131 (217)
|+..|.|.+
T Consensus 626 Hs~M~G~ViVEP 637 (638)
T 3sbq_A 626 HMEMVGRMMVEP 637 (638)
T ss_dssp CTTCEEEEEEEC
T ss_pred cccceEEEEEec
Confidence 999999974
No 48
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.19 E-value=0.2 Score=48.58 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=46.0
Q ss_pred CCceeeCCEEEEEEeCC------CCcEEEecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCC---CCCCC
Q 036938 53 TKNFVVGDVLTFNFVTN------EHDVLRVPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTF---GRHCQ 120 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~------~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v---~gHC~ 120 (217)
..++++||.+.|...+. .|++..-+. ..+ .....|. ..|+++++|.|||.|.. ..|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~-gv~---------~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H-- 581 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNY-GVA---------MEIGPQMTSSVTFVAANPGVYWYYCQWFCHALH-- 581 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTT-TEE---------EEECTTCEEEEEEECCSCEEEEEECCSCCSTTC--
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCC-Ccc---------eeeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--
Confidence 45789999999998662 477654221 100 1122343 36788999999999983 355
Q ss_pred CCCeEEEEeeCC
Q 036938 121 AGQKLAITVSAT 132 (217)
Q Consensus 121 ~GmKl~I~V~~~ 132 (217)
.||+..|.|...
T Consensus 582 ~gM~G~IiV~p~ 593 (595)
T 1fwx_A 582 MEMRGRMLVEPK 593 (595)
T ss_dssp TTCEEEEEEECC
T ss_pred cCCEEEEEEEcC
Confidence 499999999754
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=84.13 E-value=0.82 Score=39.95 Aligned_cols=76 Identities=20% Similarity=0.277 Sum_probs=48.9
Q ss_pred CceeeCCEEEEEEeCC-----CCcEEEecCCCCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCCC-----CCC
Q 036938 54 KNFVVGDVLTFNFVTN-----EHDVLRVPKASYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFGR-----HCQ 120 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~-----~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~g-----HC~ 120 (217)
.+++.||.|++++.+. .|.+..-.....+. .... .....|.. .|+++++|+|||-|-..+ |=.
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~---~~~~-~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 141 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALG---GGGL-TLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 141 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGG-CCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHH
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCC---CCce-eEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhh
Confidence 5689999999988764 46665422111110 0112 22344543 577789999999999764 666
Q ss_pred CCCeEEEEeeCCC
Q 036938 121 AGQKLAITVSATP 133 (217)
Q Consensus 121 ~GmKl~I~V~~~~ 133 (217)
.||.-.+.|....
T Consensus 142 ~Gl~G~~iV~~~~ 154 (333)
T 1mzy_A 142 SGMAGCIMVLPRD 154 (333)
T ss_dssp TTCEEEEEEECTT
T ss_pred CCCEEEEEEccCc
Confidence 8999998887543
No 50
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=83.24 E-value=1.4 Score=38.68 Aligned_cols=77 Identities=18% Similarity=0.203 Sum_probs=47.0
Q ss_pred CCceeeCCEEEEEEeCC-----CCcEEEecCCCCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCC---CCCCC
Q 036938 53 TKNFVVGDVLTFNFVTN-----EHDVLRVPKASYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFG---RHCQA 121 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~-----~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~---gHC~~ 121 (217)
..+++.||.+++++.+. .|++..=-....+ - .+.......|.. .++.+++|+|||-|... .|-..
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~d---G-~~~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~ 146 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQG---G-GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIAN 146 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGG---G-GTTTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCC---C-CCcceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhc
Confidence 35789999999988654 3555431000000 0 011012334543 56678999999999762 35567
Q ss_pred CCeEEEEeeCCC
Q 036938 122 GQKLAITVSATP 133 (217)
Q Consensus 122 GmKl~I~V~~~~ 133 (217)
||.-.|.|....
T Consensus 147 Gl~G~~iV~~~~ 158 (327)
T 1kbv_A 147 GMYGLILVEPKE 158 (327)
T ss_dssp TCEEEEEEECTT
T ss_pred ceEEEEEEecCC
Confidence 999999998643
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=82.70 E-value=1 Score=39.30 Aligned_cols=76 Identities=17% Similarity=0.228 Sum_probs=48.3
Q ss_pred CceeeCCEEEEEEeCC-----CCcEEEecCCCCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCCC----CCCC
Q 036938 54 KNFVVGDVLTFNFVTN-----EHDVLRVPKASYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFGR----HCQA 121 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~-----~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~g----HC~~ 121 (217)
.+++.||.|++++.+. .|++..=.....+ -.+.. .....|.. .++++++|+|||.|...+ |=..
T Consensus 67 i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~---~~~~~-~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 142 (336)
T 1oe1_A 67 LVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL---GGAKL-TNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142 (336)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGG-CCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred EEEcCCCEEEEEEEcCCCCCccccceECCCCCCC---CCcce-EEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhC
Confidence 4678999999988763 4666542110000 00112 22344543 567789999999999754 4467
Q ss_pred CCeEEEEeeCCC
Q 036938 122 GQKLAITVSATP 133 (217)
Q Consensus 122 GmKl~I~V~~~~ 133 (217)
||.-.+.|....
T Consensus 143 Gl~G~liV~~~~ 154 (336)
T 1oe1_A 143 GMSGTLMVLPRD 154 (336)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEecCc
Confidence 999999998644
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=74.56 E-value=1.2 Score=40.20 Aligned_cols=77 Identities=21% Similarity=0.251 Sum_probs=46.5
Q ss_pred CCceeeCCEEEEEEeCC-----CCcEEEecCCCCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcC---CCCCCCC
Q 036938 53 TKNFVVGDVLTFNFVTN-----EHDVLRVPKASYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICT---FGRHCQA 121 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~-----~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~---v~gHC~~ 121 (217)
..+++.||+|++++.+. .|++..=-....+. .... .....|.. .|+++++|+|||-|- ...|=..
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG---~~~~-~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 136 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG---GAES-SFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIAN 136 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG---GGGG-CCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC---CCcc-EEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhC
Confidence 35788999999988664 45554311000000 0000 11333442 567778999999994 3456668
Q ss_pred CCeEEEEeeCCC
Q 036938 122 GQKLAITVSATP 133 (217)
Q Consensus 122 GmKl~I~V~~~~ 133 (217)
||...+.|....
T Consensus 137 Gl~G~~iv~~~~ 148 (442)
T 2zoo_A 137 GMYGLILVEPKE 148 (442)
T ss_dssp TCEEEEEEECTT
T ss_pred ccEEEEEEeCCC
Confidence 999999988543
No 53
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=73.68 E-value=3.9 Score=35.07 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=47.0
Q ss_pred CCceeeCCEEEEEEeCC---CCcEEEe--cCCCCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCC---CCCCC
Q 036938 53 TKNFVVGDVLTFNFVTN---EHDVLRV--PKASYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFG---RHCQA 121 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~---~HsVv~V--s~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~---gHC~~ 121 (217)
..+++.||.|++++.+. .|++..= .....|.= ..... .....|.. .++.+++|++||-|-.. .|=..
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~-p~~~~-~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 144 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGT-PGIGA-GSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAK 144 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCC-TTSTT-CSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCC-CCccc-eeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhC
Confidence 35789999999998664 3444321 10111100 00000 12233442 57778999999999875 35568
Q ss_pred CCeEEEEeeCCC
Q 036938 122 GQKLAITVSATP 133 (217)
Q Consensus 122 GmKl~I~V~~~~ 133 (217)
||.-.|.|....
T Consensus 145 Gl~G~liV~~~~ 156 (288)
T 3gdc_A 145 GLYGGFIVEPKE 156 (288)
T ss_dssp TCEEEEEEECSS
T ss_pred cCeEEEEEeCCc
Confidence 999999887654
No 54
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=71.90 E-value=3 Score=36.36 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=48.0
Q ss_pred CceeeCCEEEEEEeCC-----CCcEEEecCCCCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCCC----CCCC
Q 036938 54 KNFVVGDVLTFNFVTN-----EHDVLRVPKASYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFGR----HCQA 121 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~-----~HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~g----HC~~ 121 (217)
.+++.||.|++++.+. .|.+..-.....+ -..+. .....|.. .|+++++|+|||.|...+ |=..
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~---~~~~~-~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~ 148 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGAL---GGGAL-TQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTS 148 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGG-CCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC---CCccc-eEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhC
Confidence 4678999999998764 3665432111000 00112 22334543 577789999999999764 5568
Q ss_pred CCeEEEEeeCCC
Q 036938 122 GQKLAITVSATP 133 (217)
Q Consensus 122 GmKl~I~V~~~~ 133 (217)
||.-.+.|....
T Consensus 149 Gl~G~~iV~~~~ 160 (340)
T 2bw4_A 149 GMNGAIMVLPRD 160 (340)
T ss_dssp TCEEEEEEECTB
T ss_pred cCEEEEEEccCc
Confidence 999888887643
No 55
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=69.16 E-value=9.2 Score=34.11 Aligned_cols=84 Identities=14% Similarity=0.175 Sum_probs=52.3
Q ss_pred EEEecCCCCCCCCCCCCCCCcccc----ccCCceeeCCEEEEEEeCC--CCcEEEecCCCCCCCCCCCCCCCC-ccCCC-
Q 036938 27 VHVVGDSMGWSIPTSGGAGAYNNW----AATKNFVVGDVLTFNFVTN--EHDVLRVPKASYDGCTSSNPIGNP-ITTGP- 98 (217)
Q Consensus 27 ~y~VGg~~GW~~~p~~~~~~Yt~W----As~ktF~VGDtLvF~y~~~--~HsVv~Vs~~~Y~~C~~~~~i~~~-~ssG~- 98 (217)
..++|-.=.|.+. |.+- .+...+.+|..+.|+-... .|+...-+.. + +. --.|.
T Consensus 129 IkVig~QW~W~f~-------Ypd~~i~t~n~l~lP~g~~V~~~lTS~DViHsf~IP~lg----------~-k~DaiPGr~ 190 (315)
T 1fft_B 129 IEVVSMDWKWFFI-------YPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG----------S-QIYAMAGMQ 190 (315)
T ss_dssp EEEECCTTSCEEE-------CTTTCCEEESBCCCCSSSEEEEEECBSSSCEEEEEGGGT----------E-EEEECBTSC
T ss_pred EEEeeeeccEEEe-------cCCCcccccceEEEeCCCEEEEEEEeCCccceeeecccC----------c-EEeecCCcc
Confidence 3556755556643 3221 2346789999999999864 3444331110 0 00 01232
Q ss_pred --ceEEeCCCCcEEEEcCCCCCCCCC---CeEEEEee
Q 036938 99 --ANITLDSAGEHYYICTFGRHCQAG---QKLAITVS 130 (217)
Q Consensus 99 --~~v~L~~~G~~YFiC~v~gHC~~G---mKl~I~V~ 130 (217)
..++.+++|.||..|+ ..|..| |++.|.|.
T Consensus 191 n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 191 TRLHLIANEPGTYDGISA--SYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EEEEEECCSCBCCEEBCC--SCCSTTTTTCCEECCBC
T ss_pred eeeEEecCCCeEEEEecc--ccchhhHHhccceEEEe
Confidence 3578899999999999 578765 99999988
No 56
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=66.05 E-value=4.9 Score=33.96 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=41.8
Q ss_pred CCceeeCCEEEEEEeCC--CCcEEEecCCCCCCCCCCCCCCCCc-cCCC---ceEEeCCCCcEEEEcCCCCCCCCC---C
Q 036938 53 TKNFVVGDVLTFNFVTN--EHDVLRVPKASYDGCTSSNPIGNPI-TTGP---ANITLDSAGEHYYICTFGRHCQAG---Q 123 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~--~HsVv~Vs~~~Y~~C~~~~~i~~~~-ssG~---~~v~L~~~G~~YFiC~v~gHC~~G---m 123 (217)
...+.+|+.+.|.-... .|+...-+.. + +.. --|. ..++.+++|.||..|+ .-|..| |
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP~lg----------v-K~daiPGr~n~l~~~~~~pG~y~g~Cs--E~CG~~Hs~M 108 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIPRLG----------S-QIYAMAGMQTRLHLIANEPGTYDGICA--EICGPGHSGM 108 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEGGGT----------E-EEEECTTCCEEEEECCSSSEEEEEEEC--SCCSTTSTTC
T ss_pred eEEEeCCCEEEEEEecCCceeeEEecccC----------c-EEEecCCceEEEEEEeCCCeEEEEEcc--cccccchhhc
Confidence 34677888888888753 3444331110 0 000 1232 3567789999999999 577765 9
Q ss_pred eEEEEee
Q 036938 124 KLAITVS 130 (217)
Q Consensus 124 Kl~I~V~ 130 (217)
++.|.|.
T Consensus 109 ~~~v~vv 115 (205)
T 1cyx_A 109 KFKAIAT 115 (205)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 9999998
No 57
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=65.73 E-value=5 Score=35.56 Aligned_cols=65 Identities=14% Similarity=0.197 Sum_probs=41.5
Q ss_pred CceeeCCEEEEEEeCC--CCcEEEecCCCCCCCCCCCCCCCCc-cCCC---ceEEeCCCCcEEEEcCCCCCCCCC---Ce
Q 036938 54 KNFVVGDVLTFNFVTN--EHDVLRVPKASYDGCTSSNPIGNPI-TTGP---ANITLDSAGEHYYICTFGRHCQAG---QK 124 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~--~HsVv~Vs~~~Y~~C~~~~~i~~~~-ssG~---~~v~L~~~G~~YFiC~v~gHC~~G---mK 124 (217)
..+.+|+.+.|.-... .|+...-+.. + +.. -.|. ..++.+++|.||..|+ .-|..| |+
T Consensus 191 lvlP~g~~V~~~ltS~DViHsf~iP~lg----------~-k~daiPG~~n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~ 257 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVIHAWTIPAFA----------V-KQDAVPGRIAQLWFSVDQEGVYFGQCS--ELCGINHAYMP 257 (298)
T ss_dssp EEEESSSEEEEEEEESSSCEEEEEGGGT----------E-EEEECTTCCEEEEEECSSSEEEEECCC--SCCSTTTTSCC
T ss_pred EEEEcCCEEEEEEEeCCccceeeEcccC----------c-eEEecCCceEEEEEEeCCCEEEEEEcc--cccCcCccCCe
Confidence 3566788888888653 3444331110 0 000 1232 3678899999999999 467765 99
Q ss_pred EEEEeeC
Q 036938 125 LAITVSA 131 (217)
Q Consensus 125 l~I~V~~ 131 (217)
+.|.|.+
T Consensus 258 ~~v~vvs 264 (298)
T 3hb3_B 258 IVVKAVS 264 (298)
T ss_dssp EEEEEEC
T ss_pred eEEEEEc
Confidence 9999986
No 58
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=63.72 E-value=5.6 Score=34.54 Aligned_cols=35 Identities=20% Similarity=0.084 Sum_probs=30.0
Q ss_pred ceEEeCCCCcEEEEcCCCCCC-CCCCeEEEEeeCCC
Q 036938 99 ANITLDSAGEHYYICTFGRHC-QAGQKLAITVSATP 133 (217)
Q Consensus 99 ~~v~L~~~G~~YFiC~v~gHC-~~GmKl~I~V~~~~ 133 (217)
..|+.+++|.|+|.|....|+ +.||...|+|....
T Consensus 285 vlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 285 ALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEEcCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 367888999999999988898 89999999998633
No 59
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=63.44 E-value=5.9 Score=34.28 Aligned_cols=65 Identities=11% Similarity=0.171 Sum_probs=41.2
Q ss_pred CceeeCCEEEEEEeCC--CCcEEEecCCCCCCCCCCCCCCCC-ccCCC---ceEEeCCCCcEEEEcCCCCCCCCC---Ce
Q 036938 54 KNFVVGDVLTFNFVTN--EHDVLRVPKASYDGCTSSNPIGNP-ITTGP---ANITLDSAGEHYYICTFGRHCQAG---QK 124 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~--~HsVv~Vs~~~Y~~C~~~~~i~~~-~ssG~---~~v~L~~~G~~YFiC~v~gHC~~G---mK 124 (217)
..+.+|+.+.|.-.+. .|+...-+.. + +. .-.|. ..++.+++|.||..|+ .-|..| |+
T Consensus 173 l~lP~g~~v~~~~tS~DViHsf~ip~l~----------~-k~da~PG~~n~~~~~~~~~G~y~g~Cs--e~CG~~H~~M~ 239 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVIHSWTVPAFG----------V-KQDAVPGRLAQLWFRAEREGIFFGQCS--ELCGISHAYMP 239 (262)
T ss_dssp EEEETTSEEEEEEEESSSCEEEEEGGGT----------E-EEEECBTCCEEEEEECCSCEEEEECCC--SCCSTTGGGCC
T ss_pred EEEecCCEEEEEEEECcccceeeecccC----------c-eEEecCCceeEEEEecCCcEEEEEECh--HhcccCcccCe
Confidence 3567788888887653 3433321110 0 00 01232 3678899999999999 578876 99
Q ss_pred EEEEeeC
Q 036938 125 LAITVSA 131 (217)
Q Consensus 125 l~I~V~~ 131 (217)
+.|.|.+
T Consensus 240 ~~v~vv~ 246 (262)
T 2gsm_B 240 ITVKVVS 246 (262)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9998875
No 60
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=62.45 E-value=2.5 Score=36.28 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=28.3
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeC
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~ 131 (217)
.++.+.+|.|.|.|-+..|=++||...++|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 45667899999999999999999999999863
No 61
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=62.06 E-value=5.5 Score=33.80 Aligned_cols=30 Identities=13% Similarity=0.368 Sum_probs=25.4
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCC---CeEEEEeeC
Q 036938 100 NITLDSAGEHYYICTFGRHCQAG---QKLAITVSA 131 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~G---mKl~I~V~~ 131 (217)
.++.+++|.||..|+ .-|..| |++.|.|.+
T Consensus 183 ~~~~~~~G~y~g~Cs--e~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCS--EICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCC--SCCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEeh--hhcccccccCeEEEEEEc
Confidence 577889999999999 578876 999888875
No 62
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=60.37 E-value=3.8 Score=35.60 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=29.0
Q ss_pred eEEeCCCCcEEEEcCCCCCC-CCCCeEEEEeeC
Q 036938 100 NITLDSAGEHYYICTFGRHC-QAGQKLAITVSA 131 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC-~~GmKl~I~V~~ 131 (217)
.|+.+++|.|+|.|-...|+ +.||.-.++|..
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 57788999999999999999 999999999975
No 63
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=57.63 E-value=6.9 Score=37.15 Aligned_cols=76 Identities=11% Similarity=0.177 Sum_probs=47.7
Q ss_pred CCceeeCCEEEEEEeCC--CCcEEEe-cCCCCCCCCCCCCCCCCccCCCceEEeCCCCcEEEEcCCCCCCCCCC-eEEEE
Q 036938 53 TKNFVVGDVLTFNFVTN--EHDVLRV-PKASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQAGQ-KLAIT 128 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~--~HsVv~V-s~~~Y~~C~~~~~i~~~~ssG~~~v~L~~~G~~YFiC~v~gHC~~Gm-Kl~I~ 128 (217)
+..++-|-.|+|.=..+ ..-++.+ +..+...|...--.-..|.= +....| ++|.|||..+...-|+.|- |+.|.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFEL-GKMYSV-ESGDYFMTASTTELCNDNNLRIHVH 489 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCcccc-cceEec-CCCceEecCChHHHHhCCceeEEEE
Confidence 45678888888854432 1222333 66667788764221011111 123344 4899999999999999997 99998
Q ss_pred ee
Q 036938 129 VS 130 (217)
Q Consensus 129 V~ 130 (217)
|.
T Consensus 490 ~~ 491 (491)
T 3l6w_A 490 VD 491 (491)
T ss_pred eC
Confidence 84
No 64
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=57.44 E-value=1.3 Score=38.35 Aligned_cols=76 Identities=16% Similarity=0.297 Sum_probs=32.6
Q ss_pred CCceeeCCEEEEEEeCCC--CcEEEe--cCCCCCCCC--CCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCCCCC
Q 036938 53 TKNFVVGDVLTFNFVTNE--HDVLRV--PKASYDGCT--SSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQAGQ 123 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~~--HsVv~V--s~~~Y~~C~--~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~Gm 123 (217)
..+++.||+++|+.-+.. +....+ ....++. + ..+.+ ....|. ..|+.+++|.++|.|-+..|-..||
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~-dG~~~dtv--~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM 292 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ-NHHKISAI--TLVSATSTTANMTVSPEGRWTIASLIPRHFQAGM 292 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEE-TTEECSCC--CEETTCCBC--------CCCCCBCCSTTTGGGTC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee-CCEEcceE--EECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCC
Confidence 457788999998885531 122222 1111110 0 01111 122232 3567778999999999999999999
Q ss_pred eEEEEeeC
Q 036938 124 KLAITVSA 131 (217)
Q Consensus 124 Kl~I~V~~ 131 (217)
...+.|..
T Consensus 293 ~~~~~V~~ 300 (306)
T 1sdd_A 293 QAYIDIKN 300 (306)
T ss_dssp BCCC----
T ss_pred eEEEEEec
Confidence 99888874
No 65
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=54.03 E-value=10 Score=33.12 Aligned_cols=78 Identities=22% Similarity=0.305 Sum_probs=44.3
Q ss_pred CCceeeCCEEEEEEeCC---CCcEEE-----ecCCCCCCCCCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCC--CC
Q 036938 53 TKNFVVGDVLTFNFVTN---EHDVLR-----VPKASYDGCTSSNPIGNPITTGP---ANITLDSAGEHYYICTFGR--HC 119 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~---~HsVv~-----Vs~~~Y~~C~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~g--HC 119 (217)
..+++.||++++++.+. .++|.. ......|.= ..........|. -.|+++++|+|||-|-... |=
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv--p~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~ 113 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGV--PGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHV 113 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCC--BTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHT
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCC--CccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhh
Confidence 35789999999998653 233321 111000110 000001123344 2677888999999998653 44
Q ss_pred C-CCCeEEEEeeCC
Q 036938 120 Q-AGQKLAITVSAT 132 (217)
Q Consensus 120 ~-~GmKl~I~V~~~ 132 (217)
. .||.-.+.|...
T Consensus 114 ~~~Gl~G~liV~p~ 127 (339)
T 2zwn_A 114 GVRGMWGPLIVDPK 127 (339)
T ss_dssp TTSCCEEEEEEECS
T ss_pred hcCCceEeEEecCC
Confidence 4 799888888654
No 66
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=52.68 E-value=5.4 Score=29.21 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=16.4
Q ss_pred ccCCceeeCCEEEEEEeCC
Q 036938 51 AATKNFVVGDVLTFNFVTN 69 (217)
Q Consensus 51 As~ktF~VGDtLvF~y~~~ 69 (217)
+..+..++||.|+|+|...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 5677899999999999865
No 67
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=49.31 E-value=8.2 Score=32.80 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=27.2
Q ss_pred CCCcEEEEcCCCCCCCCCCeEEEEeeCCCC
Q 036938 105 SAGEHYYICTFGRHCQAGQKLAITVSATPG 134 (217)
Q Consensus 105 ~~G~~YFiC~v~gHC~~GmKl~I~V~~~~~ 134 (217)
.+|.++|-|-+..|=+.||...+.|.....
T Consensus 239 npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 239 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 589999999999999999999999987654
No 68
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=48.13 E-value=7.1 Score=28.52 Aligned_cols=16 Identities=38% Similarity=0.910 Sum_probs=12.3
Q ss_pred CceeeCCEEEEE-EeCC
Q 036938 54 KNFVVGDVLTFN-FVTN 69 (217)
Q Consensus 54 ktF~VGDtLvF~-y~~~ 69 (217)
+.|++||.|+|+ |..+
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 569999999985 6433
No 69
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=47.48 E-value=22 Score=33.10 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=27.9
Q ss_pred eEEe-CCCCcEEEEcCCCCCCCCCCeEEEEeeCCC
Q 036938 100 NITL-DSAGEHYYICTFGRHCQAGQKLAITVSATP 133 (217)
Q Consensus 100 ~v~L-~~~G~~YFiC~v~gHC~~GmKl~I~V~~~~ 133 (217)
.+++ +++|+|||-|-...|=..||--.+.|..+.
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 5664 568999999999887778999999998643
No 70
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=45.26 E-value=30 Score=32.22 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=48.9
Q ss_pred CCceeeCCEEEEEEeCCC----CcEEE----ecCCC-CCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCCCCCC
Q 036938 53 TKNFVVGDVLTFNFVTNE----HDVLR----VPKAS-YDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFGRHCQ 120 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~~----HsVv~----Vs~~~-Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~gHC~ 120 (217)
..+++.||.|+.++.+.. ++|.. +.... .|.= ..........|.. .++++++|+|||-|-...+=.
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv--~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~ 112 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGT--ASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRS 112 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCC--BTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCC--cccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHh
Confidence 357899999999987643 33322 11110 1110 0000011233442 677789999999999888777
Q ss_pred CCCeEEEEeeCCC
Q 036938 121 AGQKLAITVSATP 133 (217)
Q Consensus 121 ~GmKl~I~V~~~~ 133 (217)
.||.-.+.|....
T Consensus 113 ~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 113 AGLYGSLIVDPPQ 125 (552)
T ss_dssp GTCEEEEEEECCT
T ss_pred ccCeeeEEEeCCc
Confidence 8999999998754
No 71
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=44.59 E-value=8.2 Score=33.34 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=28.7
Q ss_pred CCCCcEEEEcCCCCCCCCCCeEEEEeeCCCCCC
Q 036938 104 DSAGEHYYICTFGRHCQAGQKLAITVSATPGPS 136 (217)
Q Consensus 104 ~~~G~~YFiC~v~gHC~~GmKl~I~V~~~~~~~ 136 (217)
+.||.+.|-|-+..|=++||...+.|...+...
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~~ 292 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADGTM 292 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCCCC
Confidence 358999999999999999999999999876643
No 72
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=44.44 E-value=8.5 Score=33.96 Aligned_cols=81 Identities=20% Similarity=0.263 Sum_probs=49.2
Q ss_pred CCceeeCCEEEEEEeC---CCCcEEE------ecCCC-CCCCCCCCCCC----CCccCCCc---eEEe---CCCCcEEEE
Q 036938 53 TKNFVVGDVLTFNFVT---NEHDVLR------VPKAS-YDGCTSSNPIG----NPITTGPA---NITL---DSAGEHYYI 112 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~---~~HsVv~------Vs~~~-Y~~C~~~~~i~----~~~ssG~~---~v~L---~~~G~~YFi 112 (217)
..+++.||+++|.+.+ ..|.+.. |.... |.. ..+... .....|.. .|+. +.+|.|+|-
T Consensus 210 ~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~G~~~~--p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 210 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTG--PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCS--TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred cEEeCCCCEEEEEEEcCCccccccEecCcEEEEeccCcccC--CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 3578999999988854 3455533 21111 110 000000 01122332 3443 578999999
Q ss_pred cCCCCCCCCCCeEEEEeeCCCCC
Q 036938 113 CTFGRHCQAGQKLAITVSATPGP 135 (217)
Q Consensus 113 C~v~gHC~~GmKl~I~V~~~~~~ 135 (217)
|-+..|=+.||...+.|......
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCHHHHhccCcEEEEEecCCCC
Confidence 99999999999999999876553
No 73
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=42.23 E-value=22 Score=33.39 Aligned_cols=77 Identities=17% Similarity=0.226 Sum_probs=47.5
Q ss_pred CceeeCCEEEEEEeCCC----CcEEE----ecCC-CCCCCCCCCCCCCCccC-CCc---eEEeCCCCcEEEEcCCCCCCC
Q 036938 54 KNFVVGDVLTFNFVTNE----HDVLR----VPKA-SYDGCTSSNPIGNPITT-GPA---NITLDSAGEHYYICTFGRHCQ 120 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~~----HsVv~----Vs~~-~Y~~C~~~~~i~~~~ss-G~~---~v~L~~~G~~YFiC~v~gHC~ 120 (217)
.+++.||.|++++.+.. ++|.. +... .+|. ........... |.. .++++++|+|||-|-...|=.
T Consensus 69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG--~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~ 146 (559)
T 2q9o_A 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDG--ANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYG 146 (559)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC--CBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGG
T ss_pred EEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCC--CCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhc
Confidence 46789999999987643 34432 1100 1111 00000001223 543 678889999999999987777
Q ss_pred CCCeEEEEeeCC
Q 036938 121 AGQKLAITVSAT 132 (217)
Q Consensus 121 ~GmKl~I~V~~~ 132 (217)
.||.-.+.|..+
T Consensus 147 ~Gl~G~liV~~~ 158 (559)
T 2q9o_A 147 NGVVGTIQINGP 158 (559)
T ss_dssp GTCEEEEEEECC
T ss_pred CCceEEEEecCC
Confidence 899999988754
No 74
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=41.24 E-value=13 Score=29.20 Aligned_cols=26 Identities=31% Similarity=0.459 Sum_probs=19.7
Q ss_pred ccCCceeeCCEEEEEEeCCCCcEEEe
Q 036938 51 AATKNFVVGDVLTFNFVTNEHDVLRV 76 (217)
Q Consensus 51 As~ktF~VGDtLvF~y~~~~HsVv~V 76 (217)
+..+.+++||.++|++.....-+++|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 56788999999999998753235555
No 75
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=40.00 E-value=31 Score=32.16 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=48.3
Q ss_pred CCceeeCCEEEEEEeCCCC----cEEE----ecCC-CCCCCCCCCCCCCCccCCCc---eEEeC-CCCcEEEEcCCCCCC
Q 036938 53 TKNFVVGDVLTFNFVTNEH----DVLR----VPKA-SYDGCTSSNPIGNPITTGPA---NITLD-SAGEHYYICTFGRHC 119 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~~H----sVv~----Vs~~-~Y~~C~~~~~i~~~~ssG~~---~v~L~-~~G~~YFiC~v~gHC 119 (217)
..+++.||.|+.++.+... +|.. +... ..|. ...........|.. .|+++ ++|+|||-|-...|=
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG--~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~ 112 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDG--VPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQY 112 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSC--CBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccC--CCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccc
Confidence 3578999999999987532 2221 1000 0110 00000011223442 67777 899999999998887
Q ss_pred CCCCeEEEEeeCCC
Q 036938 120 QAGQKLAITVSATP 133 (217)
Q Consensus 120 ~~GmKl~I~V~~~~ 133 (217)
..||.-.+.|....
T Consensus 113 ~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 113 EDGMKGLFIIKDDS 126 (534)
T ss_dssp GGTCEEEEEEECTT
T ss_pred cCcceeeEEeCCCC
Confidence 88999999998654
No 76
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=39.69 E-value=17 Score=31.65 Aligned_cols=77 Identities=19% Similarity=0.308 Sum_probs=43.8
Q ss_pred CceeeCCEEEEEEeCC---CCcEEEe--cCC---CCCCCCCCCCCCCCccCCCc---eEEeCCCCcEEEEcCCCCC-C--
Q 036938 54 KNFVVGDVLTFNFVTN---EHDVLRV--PKA---SYDGCTSSNPIGNPITTGPA---NITLDSAGEHYYICTFGRH-C-- 119 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~---~HsVv~V--s~~---~Y~~C~~~~~i~~~~ssG~~---~v~L~~~G~~YFiC~v~gH-C-- 119 (217)
.+++.||.|++++.+. .|++..- ... ..|.= ..........|.. .++.+++|++||-|-...+ .
T Consensus 36 i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~--p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~ 113 (318)
T 3g5w_A 36 IHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGV--PHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVT 113 (318)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCC--BTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHH
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCC--cccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhc
Confidence 5789999999999764 3444321 100 11110 0000011223442 6778899999999987421 1
Q ss_pred CCCCeEEEEeeCC
Q 036938 120 QAGQKLAITVSAT 132 (217)
Q Consensus 120 ~~GmKl~I~V~~~ 132 (217)
..||.-.+.|...
T Consensus 114 ~~Gl~G~lIV~~~ 126 (318)
T 3g5w_A 114 MRGMWGPLIVEPK 126 (318)
T ss_dssp HSCCEEEEEEECS
T ss_pred cCCCEEEEEEcCC
Confidence 2699888888754
No 77
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=39.53 E-value=13 Score=32.24 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=28.2
Q ss_pred eEEeCCCCcEEEEcCCCCCC-CCCCeEEEEeeCC
Q 036938 100 NITLDSAGEHYYICTFGRHC-QAGQKLAITVSAT 132 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC-~~GmKl~I~V~~~ 132 (217)
.|+.+++|.|+|.|....|| ..||...+.|...
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGA 308 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCC
Confidence 56778899999999999998 7899888888753
No 78
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=38.21 E-value=48 Score=30.70 Aligned_cols=78 Identities=18% Similarity=0.185 Sum_probs=47.3
Q ss_pred CceeeCCEEEEEEeCCC--------CcEEEe--cCCCCCCCCCCCC--C-CCCccCCCc---eEEe-CCCCcEEEEcCCC
Q 036938 54 KNFVVGDVLTFNFVTNE--------HDVLRV--PKASYDGCTSSNP--I-GNPITTGPA---NITL-DSAGEHYYICTFG 116 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~~--------HsVv~V--s~~~Y~~C~~~~~--i-~~~~ssG~~---~v~L-~~~G~~YFiC~v~ 116 (217)
.+++.||.|+.++.+.. ++|..= .+. ......+. + ......|.. .|++ +++|+|||-|-..
T Consensus 37 I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~--~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~ 114 (495)
T 3t6v_A 37 IAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQK--GTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLT 114 (495)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECST
T ss_pred EEEECCcEEEEEEEECCCCccCCCceEEEeCCcccC--CCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccch
Confidence 57899999999997653 233321 100 00001111 0 011233443 5677 6789999999988
Q ss_pred CCCCCCCeEEEEeeCCC
Q 036938 117 RHCQAGQKLAITVSATP 133 (217)
Q Consensus 117 gHC~~GmKl~I~V~~~~ 133 (217)
.|=..||.-.+.|..+.
T Consensus 115 ~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 115 TQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp TGGGGTCEEEEEEECTT
T ss_pred hHHhcCceEEEEEcCcc
Confidence 77778999999997644
No 79
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=36.87 E-value=71 Score=29.61 Aligned_cols=78 Identities=18% Similarity=0.269 Sum_probs=47.3
Q ss_pred CceeeCCEEEEEEeCCC--------CcEEEe--cCCCCCCCCCCCCC---CCCccCCCc---eEEe-CCCCcEEEEcCCC
Q 036938 54 KNFVVGDVLTFNFVTNE--------HDVLRV--PKASYDGCTSSNPI---GNPITTGPA---NITL-DSAGEHYYICTFG 116 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~~--------HsVv~V--s~~~Y~~C~~~~~i---~~~~ssG~~---~v~L-~~~G~~YFiC~v~ 116 (217)
.+++.||.|+.++.+.. ++|..= ... ......+.- ......|.. .|++ +++|+|||-|-..
T Consensus 36 I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~--~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~ 113 (499)
T 3pxl_A 36 VAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQH--GTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLS 113 (499)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECST
T ss_pred EEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccC--CCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccch
Confidence 57899999999987653 234321 100 001011110 011233443 5677 5789999999988
Q ss_pred CCCCCCCeEEEEeeCCC
Q 036938 117 RHCQAGQKLAITVSATP 133 (217)
Q Consensus 117 gHC~~GmKl~I~V~~~~ 133 (217)
.|=..||.-.+.|..+.
T Consensus 114 ~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 114 TQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp TGGGGTCEEEEEEECTT
T ss_pred hHHhccceeEEEEcCCc
Confidence 77778999999997644
No 80
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=36.54 E-value=35 Score=32.52 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=28.1
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeCC
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVSAT 132 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~~ 132 (217)
.|+++++|+|||-|-...|=..||.-.|.|..+
T Consensus 156 ~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 678889999999999877777899888888754
No 81
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=36.15 E-value=0.55 Score=27.13 Aligned_cols=19 Identities=47% Similarity=0.803 Sum_probs=14.7
Q ss_pred CCceeeCCEEEEEEeCCCC
Q 036938 53 TKNFVVGDVLTFNFVTNEH 71 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~~H 71 (217)
.|.|.|.|.|.|.|..+.|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 5789999999999987654
No 82
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=35.35 E-value=54 Score=29.53 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=0.0
Q ss_pred ceeeCCEEEEEEeCCCCcEEEe-cCCCCCCCCCCCCCCCCccCCCc---eEEe--CCCCcEEEEcCCCC----CCCCCCe
Q 036938 55 NFVVGDVLTFNFVTNEHDVLRV-PKASYDGCTSSNPIGNPITTGPA---NITL--DSAGEHYYICTFGR----HCQAGQK 124 (217)
Q Consensus 55 tF~VGDtLvF~y~~~~HsVv~V-s~~~Y~~C~~~~~i~~~~ssG~~---~v~L--~~~G~~YFiC~v~g----HC~~GmK 124 (217)
+++.||+|+.++.+....-.-+ -..-.......+.. .....|.. .+++ +++|+|||-|-..+ |=..||.
T Consensus 50 ~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~-~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~ 128 (439)
T 2xu9_A 50 RVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDDPF-LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLL 128 (439)
T ss_dssp EECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSCTT-CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCC
T ss_pred EEeCCCEEEEEEEECCCCCcceEeCCCCCCccccCCc-ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCe
Q ss_pred EEEEeeC
Q 036938 125 LAITVSA 131 (217)
Q Consensus 125 l~I~V~~ 131 (217)
-.+.|..
T Consensus 129 G~liV~~ 135 (439)
T 2xu9_A 129 GALVVES 135 (439)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
No 83
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=34.55 E-value=17 Score=33.21 Aligned_cols=71 Identities=10% Similarity=0.082 Sum_probs=45.6
Q ss_pred CceeeCCEEEEEEeCC---CCcEEE----e-cC-CCCCCCCCCCCCCCCccCCC---ceEEeCC-CCcEEEEcCC----C
Q 036938 54 KNFVVGDVLTFNFVTN---EHDVLR----V-PK-ASYDGCTSSNPIGNPITTGP---ANITLDS-AGEHYYICTF----G 116 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~---~HsVv~----V-s~-~~Y~~C~~~~~i~~~~ssG~---~~v~L~~-~G~~YFiC~v----~ 116 (217)
.+++.||.|++++.+. .++|.. + .. +....| ....|. -.+++++ +|+|||-|-. .
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~--------~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~ 123 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPAR--------MMSPNADWAPVLPIRQNAATLWYHANTPNRTA 123 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGG--------CBCTTCEECCEEECCSCSEEEEEEECCTTTHH
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCCCCcC--------cCCCCCeEEEEEEcCCCCcceEEecCCCCchh
Confidence 4578999999999775 244422 1 11 111123 122343 3688886 9999999987 3
Q ss_pred CCCCCCCeEEEEeeCC
Q 036938 117 RHCQAGQKLAITVSAT 132 (217)
Q Consensus 117 gHC~~GmKl~I~V~~~ 132 (217)
.|=..||--.+.|...
T Consensus 124 ~q~~~Gl~G~liV~~~ 139 (451)
T 2uxt_A 124 QQVYNGLAGMWLVEDE 139 (451)
T ss_dssp HHHHTTCEEEEEEECH
T ss_pred hhHhhcceEEEEEecC
Confidence 3555899999988864
No 84
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=34.12 E-value=18 Score=34.43 Aligned_cols=32 Identities=13% Similarity=0.151 Sum_probs=28.7
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeC
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVSA 131 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~ 131 (217)
.|..+++|.++|.|-+..|-..||...+.|..
T Consensus 296 ~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 296 EMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred EEEeccceEeecccCcccccccccccceeeec
Confidence 56778899999999999999999999999974
No 85
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=32.89 E-value=14 Score=37.64 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=50.9
Q ss_pred CCceeeCCEEEEEEeC-----CCCcEEEec------CCCCCCCCCCCCCCCCccCCCceEEeCCCCcEEEEcCCCCCCCC
Q 036938 53 TKNFVVGDVLTFNFVT-----NEHDVLRVP------KASYDGCTSSNPIGNPITTGPANITLDSAGEHYYICTFGRHCQA 121 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~-----~~HsVv~Vs------~~~Y~~C~~~~~i~~~~ssG~~~v~L~~~G~~YFiC~v~gHC~~ 121 (217)
...+..||.|+.+... ..|++.+-. ...++.|...- ..+-...++.+.+|++++-|-+..|=..
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~p-----g~~~t~~~~~~~~Gt~~~h~h~~~~~~~ 707 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLFP-----QTSLTLHMWPDTEGTFNVECLTTDHYTG 707 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEECT-----TCEEEEEECCCSCEEEEEEECSHHHHHT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeecC-----CceEEEEEecCCCeEEEEecCCCcccCC
Confidence 5789999999988754 256665521 11233443211 1111235666789999999999999999
Q ss_pred CCeEEEEeeCCC
Q 036938 122 GQKLAITVSATP 133 (217)
Q Consensus 122 GmKl~I~V~~~~ 133 (217)
||+..+.|....
T Consensus 708 Gm~g~~~V~~~~ 719 (1065)
T 2j5w_A 708 GMKQKYTVNQCR 719 (1065)
T ss_dssp TCEEEEEEECCS
T ss_pred CcEEEEEEcCCc
Confidence 999999997643
No 86
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=32.00 E-value=25 Score=31.49 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=28.5
Q ss_pred eEEeCCCCcEEEEcCCCCCC-CCCCeEEEEeeCCC
Q 036938 100 NITLDSAGEHYYICTFGRHC-QAGQKLAITVSATP 133 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC-~~GmKl~I~V~~~~ 133 (217)
.|+++++|.|+|.|....|+ ..||...+.|....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 57788899999999988887 78998888887643
No 87
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=31.43 E-value=36 Score=29.32 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=26.9
Q ss_pred eEEeCCCCcEEEEcCCC-CCCCCCCeEEEEeeC
Q 036938 100 NITLDSAGEHYYICTFG-RHCQAGQKLAITVSA 131 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~-gHC~~GmKl~I~V~~ 131 (217)
.|..+++|.|+|.|... .|=+.||.-.|.|..
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTG 324 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECC
Confidence 57778899999999987 366889998899975
No 88
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=30.51 E-value=20 Score=30.96 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=28.3
Q ss_pred CCCcEEEEcCCCCCCCCCCeEEEEeeCCCCCC
Q 036938 105 SAGEHYYICTFGRHCQAGQKLAITVSATPGPS 136 (217)
Q Consensus 105 ~~G~~YFiC~v~gHC~~GmKl~I~V~~~~~~~ 136 (217)
.+|.+.|-|-+..|=++||.-.++|.......
T Consensus 245 nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 245 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred CCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 58999999999999999999999999877644
No 89
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=30.35 E-value=31 Score=25.45 Aligned_cols=42 Identities=21% Similarity=0.385 Sum_probs=27.6
Q ss_pred EEEecCCCCCCCCCCCCCCCccccc--cCCceeeCCEEEEE--EeCCCCcEEEe
Q 036938 27 VHVVGDSMGWSIPTSGGAGAYNNWA--ATKNFVVGDVLTFN--FVTNEHDVLRV 76 (217)
Q Consensus 27 ~y~VGg~~GW~~~p~~~~~~Yt~WA--s~ktF~VGDtLvF~--y~~~~HsVv~V 76 (217)
..++||+.| ...++.|. ....|..||++.++ |...+..-.|+
T Consensus 38 ~~~l~DeTG--------~I~~t~W~~~~~~~~~~G~~V~i~n~~v~~~~G~~~L 83 (109)
T 2kbn_A 38 VGLLGDETG--------IIKFTIWKNAELPLLEQGESYLLRSVVVGEYNDRFQV 83 (109)
T ss_dssp EEEEECTTC--------CEEEEEEGGGCCCCCCTTCEEEEEEEEEEEETTEEEE
T ss_pred EEEEECCCC--------eEEEEEECcccccccCCCCEEEEEEEEEEEECCEEEE
Confidence 356888766 25688887 34589999999988 33333344443
No 90
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=30.35 E-value=38 Score=33.37 Aligned_cols=76 Identities=12% Similarity=0.067 Sum_probs=44.6
Q ss_pred CceeeCCEEEEEEeCCC--------CcEEEecCCCCCCCCCCCCCCCCccCCCc---eEEeC----------CCCcEEEE
Q 036938 54 KNFVVGDVLTFNFVTNE--------HDVLRVPKASYDGCTSSNPIGNPITTGPA---NITLD----------SAGEHYYI 112 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~~--------HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~---~v~L~----------~~G~~YFi 112 (217)
.++++||+|+.++.+.. |-+.+- ....|.= .+.. .....|.. .+++. ..|+|||.
T Consensus 201 Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~-~~~~dG~--~~~~-~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYH 276 (770)
T 2r7e_B 201 IRAEVEDNIMVTFRNQASRPYSFYSSLISYE-EDQRQGA--EPRK-NFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYS 276 (770)
T ss_dssp CCCCSSSCEEEEEECCSSSCCCCCBTTCCCC-CCSSSCT--TTTS-SCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEEC
T ss_pred EEEEcCCEEEEEEEECCCCCcceeecccccc-cccCCCC--cCcc-CccCCCCeEEEEEEecCccCCccCCCCCeeEEee
Confidence 46789999999997642 322221 1111000 0011 12234443 34444 57999999
Q ss_pred cCCCC--CCCCCCeEEEEeeCCC
Q 036938 113 CTFGR--HCQAGQKLAITVSATP 133 (217)
Q Consensus 113 C~v~g--HC~~GmKl~I~V~~~~ 133 (217)
|.+.. |...||.-.|.|....
T Consensus 277 sh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 277 SDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp CCSSSSHHHHTSCCEEEEEECST
T ss_pred ccCCcHHHHhCCceeeEEECCCc
Confidence 98865 6778999888888654
No 91
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=29.80 E-value=1.8e+02 Score=24.64 Aligned_cols=29 Identities=21% Similarity=0.031 Sum_probs=19.9
Q ss_pred CCCcEEEEcCCCCC------CCCCCeEEEEeeCCC
Q 036938 105 SAGEHYYICTFGRH------CQAGQKLAITVSATP 133 (217)
Q Consensus 105 ~~G~~YFiC~v~gH------C~~GmKl~I~V~~~~ 133 (217)
..|+|||-|-..+. =..||.-.+.|....
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~ 164 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG 164 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEeccc
Confidence 45999999865332 124998888887543
No 92
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=28.45 E-value=47 Score=28.76 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=27.6
Q ss_pred eEEeCCCCcEEEEcCCCCCCC------CCCeEEEEeeCCC
Q 036938 100 NITLDSAGEHYYICTFGRHCQ------AGQKLAITVSATP 133 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~------~GmKl~I~V~~~~ 133 (217)
.+..+++|.+.|-|-+..|-. .||...|.+...+
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 567788999999999999998 4677778876543
No 93
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=28.19 E-value=55 Score=27.56 Aligned_cols=78 Identities=17% Similarity=0.131 Sum_probs=43.7
Q ss_pred CceeeCCEEEEEEeCC---CCcEEEe--cC-CCCCCCCCCCCCCCCccCCCc---eEEeCC-------------CCcEEE
Q 036938 54 KNFVVGDVLTFNFVTN---EHDVLRV--PK-ASYDGCTSSNPIGNPITTGPA---NITLDS-------------AGEHYY 111 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~---~HsVv~V--s~-~~Y~~C~~~~~i~~~~ssG~~---~v~L~~-------------~G~~YF 111 (217)
.+++.||.|++++.+. .++|..= .. ...|.-... . .....|.. .+++++ .|.+||
T Consensus 38 i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~~DG~~~t--~-~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~Y 114 (276)
T 3kw8_A 38 IEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMN--K-SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHY 114 (276)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTT--T-CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEE
T ss_pred EEEECCCEEEEEEEECCCCCccEeecCcccCCccCCCcCC--c-CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEE
Confidence 4689999999999764 2333221 00 011110000 0 12234443 566654 478889
Q ss_pred EcCCCC------CCCCCCeEEEEeeCCCC
Q 036938 112 ICTFGR------HCQAGQKLAITVSATPG 134 (217)
Q Consensus 112 iC~v~g------HC~~GmKl~I~V~~~~~ 134 (217)
-|-+.+ |=..||.-.+.|.....
T Consensus 115 H~h~~~~~~~~~~~~~Gl~G~liV~~~~~ 143 (276)
T 3kw8_A 115 HDHVVGTEHGTGGIRNGLYGPVIVRRKGD 143 (276)
T ss_dssp ECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred ecCccccccchhhhhCccEEEEEEecCCC
Confidence 998754 34569988888886543
No 94
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=27.70 E-value=47 Score=32.52 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=28.5
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeCC
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVSAT 132 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~~ 132 (217)
.++.+++|.++|.|-+..|=..||.-.+.|...
T Consensus 298 ~~~~~~pG~w~~hCH~~~H~~~GM~~~~~V~~~ 330 (742)
T 2r7e_A 298 QTLLMDLGQFLLFCHISSHQHDGMEAYVKVDSC 330 (742)
T ss_dssp EECCCSCSEECCCCCSSSSSTTSCCBCEEECCC
T ss_pred EEEeCCCeeEEEEeCChhHHhCCCeEEEEEecC
Confidence 566678999999999999999999888888753
No 95
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=27.50 E-value=6.3 Score=38.97 Aligned_cols=74 Identities=18% Similarity=0.172 Sum_probs=46.8
Q ss_pred CCceeeCCEEEEEEeCC-----CCcEEE------e-cCCCCCCCCCCCCCCCCccCCCc--eEEeCCCCcEEEEcCCCCC
Q 036938 53 TKNFVVGDVLTFNFVTN-----EHDVLR------V-PKASYDGCTSSNPIGNPITTGPA--NITLDSAGEHYYICTFGRH 118 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~-----~HsVv~------V-s~~~Y~~C~~~~~i~~~~ssG~~--~v~L~~~G~~YFiC~v~gH 118 (217)
..+++.||.+.+.+.+. .|.+.. | ....+ ..+.+ .+.-.+.. .|+.+++|.+.|.|-+..|
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~----~~Dtv-~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H 443 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY----KMALY-NLYPGVFETVEMLPSKAGIWRVECLIGEH 443 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC----EESEE-ECCTTCCCEEEECCSSCBCCCBCCCSHHH
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc----eeeEE-EECCCeEEEEEEEeCCCCceEEEeccccc
Confidence 35789999999988652 354432 2 11111 01111 12222222 4566789999999999999
Q ss_pred CCCCCeEEEEeeC
Q 036938 119 CQAGQKLAITVSA 131 (217)
Q Consensus 119 C~~GmKl~I~V~~ 131 (217)
...||...+.|.+
T Consensus 444 ~~~GM~~~~~V~s 456 (770)
T 2r7e_B 444 LHAGMSTLFLVYS 456 (770)
T ss_dssp HTTBCCCCCCBCC
T ss_pred ccccccccccccc
Confidence 9999999888853
No 96
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=27.09 E-value=16 Score=27.84 Aligned_cols=12 Identities=42% Similarity=0.703 Sum_probs=10.2
Q ss_pred CceeeCCEEEEE
Q 036938 54 KNFVVGDVLTFN 65 (217)
Q Consensus 54 ktF~VGDtLvF~ 65 (217)
+.+++||.|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 378999999994
No 97
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=26.81 E-value=38 Score=30.25 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=28.5
Q ss_pred eEEeCCCCcEEEEcCCCCCCCCCCeEEEEeeCC
Q 036938 100 NITLDSAGEHYYICTFGRHCQAGQKLAITVSAT 132 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~~GmKl~I~V~~~ 132 (217)
.|..+++|.++|.|-...|=..||...+.|...
T Consensus 402 ~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~ 434 (447)
T 2dv6_A 402 DFKIDRAGRYILVDHALSRLEHGLVGFLNVDGP 434 (447)
T ss_dssp EEECCSCEEEEEEESSGGGGGGTCCEEEEECSC
T ss_pred EEECCCCEEEEEEecCcCccccCCEEEEEEeCC
Confidence 567788999999999999988899999999653
No 98
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=26.77 E-value=86 Score=26.87 Aligned_cols=29 Identities=21% Similarity=0.045 Sum_probs=20.5
Q ss_pred CCCcEEEEcCCCCCC------CCCCeEEEEeeCCC
Q 036938 105 SAGEHYYICTFGRHC------QAGQKLAITVSATP 133 (217)
Q Consensus 105 ~~G~~YFiC~v~gHC------~~GmKl~I~V~~~~ 133 (217)
..|+|||-|-+.+.= ..||.-.|.|....
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 148 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 148 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeeccc
Confidence 458999999765432 36898888887543
No 99
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=26.36 E-value=32 Score=24.34 Aligned_cols=18 Identities=33% Similarity=0.615 Sum_probs=14.7
Q ss_pred cCCceeeCCEEEEEEeCC
Q 036938 52 ATKNFVVGDVLTFNFVTN 69 (217)
Q Consensus 52 s~ktF~VGDtLvF~y~~~ 69 (217)
.-..|++||.|.|.|...
T Consensus 50 ~l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 50 KMSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp EECCCCTTCEEEEEEEEE
T ss_pred hhhcCCCCCEEEEEEEEe
Confidence 346799999999999753
No 100
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=26.24 E-value=31 Score=24.83 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=16.4
Q ss_pred ccccCCceeeCCEEEEEEeCC
Q 036938 49 NWAATKNFVVGDVLTFNFVTN 69 (217)
Q Consensus 49 ~WAs~ktF~VGDtLvF~y~~~ 69 (217)
+.+.-..|++||.|.|.|...
T Consensus 55 ~~~~l~~lk~Gd~V~F~~~~~ 75 (88)
T 2vb2_X 55 PQTKMSEIKTGDKVAFNFVQQ 75 (88)
T ss_dssp TTCEECCCCTTCEEEEEEEEE
T ss_pred ChhhhhcCCCCCEEEEEEEEe
Confidence 444456899999999999753
No 101
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=25.96 E-value=1e+02 Score=26.28 Aligned_cols=79 Identities=14% Similarity=0.228 Sum_probs=43.3
Q ss_pred CceeeCCEEEEEEeCC---CCcEEE----ecCCCCCC-CCCCCCC-----CCCccCCCc---eEEeCCC----------C
Q 036938 54 KNFVVGDVLTFNFVTN---EHDVLR----VPKASYDG-CTSSNPI-----GNPITTGPA---NITLDSA----------G 107 (217)
Q Consensus 54 ktF~VGDtLvF~y~~~---~HsVv~----Vs~~~Y~~-C~~~~~i-----~~~~ssG~~---~v~L~~~----------G 107 (217)
.++++||+|++++.+. .+++.. ++.+ .|. ....+.. ......|.. .+++++. |
T Consensus 62 I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~-~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~G 140 (306)
T 1sdd_A 62 LYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF-SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCL 140 (306)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEESSCCCTT-TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEE
T ss_pred EEEeCCCEEEEEEEECCCCcccEeecceecccc-cCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCce
Confidence 4689999999999764 233322 1111 111 1111100 011223442 5666554 7
Q ss_pred cEEEEcCCCC--CCCCCCeEEEEeeCCC
Q 036938 108 EHYYICTFGR--HCQAGQKLAITVSATP 133 (217)
Q Consensus 108 ~~YFiC~v~g--HC~~GmKl~I~V~~~~ 133 (217)
+|||-|-... |-..||.-.+.|....
T Consensus 141 T~wYHsH~~~~~q~~~GL~G~liV~~~~ 168 (306)
T 1sdd_A 141 THIYYSYVNLVEDFNSGLIGPLLICKKG 168 (306)
T ss_dssp EEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred EEEEeccCCchhhhccCceEEEEEccCC
Confidence 9999997654 4457998888887543
No 102
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=25.50 E-value=81 Score=28.98 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=0.0
Q ss_pred ceeeCCEEEEEEeCCC-------------CcEEEecCCCCCCCCCCCCCCCCccCCCceEEeC---CCCcEEEEcCCCCC
Q 036938 55 NFVVGDVLTFNFVTNE-------------HDVLRVPKASYDGCTSSNPIGNPITTGPANITLD---SAGEHYYICTFGRH 118 (217)
Q Consensus 55 tF~VGDtLvF~y~~~~-------------HsVv~Vs~~~Y~~C~~~~~i~~~~ssG~~~v~L~---~~G~~YFiC~v~gH 118 (217)
+++.||.|+.++.+.. |-+.+-.....|.=-.-..- .+--.+....++. ++|+|||-|-...|
T Consensus 37 ~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~-~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q 115 (503)
T 1hfu_A 37 RGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQC-PISPGHAFLYKFTPAGHAGTFWYHSHFGTQ 115 (503)
T ss_dssp EEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBC-CBCTTCEEEEEECCTTCCEEEEEEECSTTG
T ss_pred EEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccC-CcCCCCeEEEEEEeCCCCccEEEEecchhh
Q ss_pred CCCCCeEEEEeeCCC
Q 036938 119 CQAGQKLAITVSATP 133 (217)
Q Consensus 119 C~~GmKl~I~V~~~~ 133 (217)
=..||.-.+.|..+.
T Consensus 116 ~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 116 YCDGLRGPMVIYDDN 130 (503)
T ss_dssp GGGTCEEEEEEECTT
T ss_pred hhCcceeeEEEcCCC
No 103
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=25.42 E-value=20 Score=27.25 Aligned_cols=11 Identities=27% Similarity=0.742 Sum_probs=9.9
Q ss_pred CceeeCCEEEE
Q 036938 54 KNFVVGDVLTF 64 (217)
Q Consensus 54 ktF~VGDtLvF 64 (217)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 104
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=25.20 E-value=28 Score=25.62 Aligned_cols=29 Identities=10% Similarity=0.161 Sum_probs=23.2
Q ss_pred EEEecCCCCCCCCCCCCCCCccccccCCceeeCCEEEEE
Q 036938 27 VHVVGDSMGWSIPTSGGAGAYNNWAATKNFVVGDVLTFN 65 (217)
Q Consensus 27 ~y~VGg~~GW~~~p~~~~~~Yt~WAs~ktF~VGDtLvF~ 65 (217)
+.+|||+.| . ..++-|-.. |+.||++.++
T Consensus 41 ~~~l~DeTG-~-------I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA-R-------IRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC-E-------EEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC-e-------EEEEEEcCc--cCCCCEEEEE
Confidence 467888776 2 558889877 9999999988
No 105
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=23.94 E-value=22 Score=34.79 Aligned_cols=76 Identities=9% Similarity=0.124 Sum_probs=49.5
Q ss_pred CceeeCCEEEEEEeC-C----CCcEEEecCCCCCCC-CCCCCCCCCccCCC---ceEEeCCCCcEEEEcCCCCCCCCCCe
Q 036938 54 KNFVVGDVLTFNFVT-N----EHDVLRVPKASYDGC-TSSNPIGNPITTGP---ANITLDSAGEHYYICTFGRHCQAGQK 124 (217)
Q Consensus 54 ktF~VGDtLvF~y~~-~----~HsVv~Vs~~~Y~~C-~~~~~i~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~GmK 124 (217)
..++.||++++..-+ + .|.+..-. ..|+-= -..+.+ . ...|. ..++.+.+|.++|.|-+..|=..||.
T Consensus 628 l~v~~Ge~vr~rliN~g~~~~~h~~HlhG-h~f~v~~~~~Dtv-~-l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~ 704 (742)
T 2r7e_A 628 LSVCLHEVAYWYILSIGAQTDFLSVFFSG-YTFKHKMVYEDTL-T-LFPFSGETVFMSMENPGLWILGCHNSDFRNRGMT 704 (742)
T ss_dssp CCCCSSCCCEEEEEECSSCCCCCCCEESS-SCCCCBSSSBCSS-C-CCCCSSEECCEECCCCCCSCCEECCCSTTHHHHS
T ss_pred EEEeCCCEEEEEEEeCCCCcceEEEEEcC-cEEEEeccceeEE-E-ECCCcEEEEEEEcCCCeEEEEEeCCchHHhCCCe
Confidence 789999999998855 2 46665421 111110 011122 2 22333 25677889999999999999889999
Q ss_pred EEEEeeCC
Q 036938 125 LAITVSAT 132 (217)
Q Consensus 125 l~I~V~~~ 132 (217)
..+.|...
T Consensus 705 ~~~~V~~~ 712 (742)
T 2r7e_A 705 ALLKVSSC 712 (742)
T ss_dssp CCCCCCCC
T ss_pred EEEEEEeC
Confidence 88888753
No 106
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=23.19 E-value=40 Score=24.00 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=16.5
Q ss_pred ccccCCceeeCCEEEEEEeCC
Q 036938 49 NWAATKNFVVGDVLTFNFVTN 69 (217)
Q Consensus 49 ~WAs~ktF~VGDtLvF~y~~~ 69 (217)
+.+.-..+++||.|.|.+...
T Consensus 41 ~~~~l~~lk~Gd~V~F~~~~~ 61 (82)
T 2l55_A 41 PAGLPQGLKAGDRVAFSFRLD 61 (82)
T ss_dssp TTCCCSSCSTTCEEEEEEEEE
T ss_pred ChhHhhcCCCCCEEEEEEEEC
Confidence 444456899999999999764
No 107
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=23.06 E-value=74 Score=29.45 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=0.0
Q ss_pred ceeeCCEEEEEEeCCCCcEEEe-cCCCCCCCCCCCCCCCCccCCCc---eEEeCC--CCcEEEEcCC----CCCCCCCCe
Q 036938 55 NFVVGDVLTFNFVTNEHDVLRV-PKASYDGCTSSNPIGNPITTGPA---NITLDS--AGEHYYICTF----GRHCQAGQK 124 (217)
Q Consensus 55 tF~VGDtLvF~y~~~~HsVv~V-s~~~Y~~C~~~~~i~~~~ssG~~---~v~L~~--~G~~YFiC~v----~gHC~~GmK 124 (217)
+++.||.|+.++.+....=.-+ -..-+......+........|.. .|++.+ +|+|||-|-. ..|=..||.
T Consensus 85 r~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~ 164 (481)
T 3zx1_A 85 EVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLA 164 (481)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEEETCCCCGGGSCCTTSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCC
T ss_pred EEECCcEEEEEEEeCCCCCeeEEecCcccCCccCCCccCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccce
Q ss_pred EEEEeeCCCCCC
Q 036938 125 LAITVSATPGPS 136 (217)
Q Consensus 125 l~I~V~~~~~~~ 136 (217)
-.+.|.......
T Consensus 165 G~lIV~~~~~~~ 176 (481)
T 3zx1_A 165 GAFVIKAKKDAL 176 (481)
T ss_dssp EEEEEECSSCTT
T ss_pred EEEEEcCccccc
No 108
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=22.60 E-value=75 Score=27.53 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.4
Q ss_pred eEEeCCCCcEEEEcCCCCCCC------CCCeEEEEeeCC
Q 036938 100 NITLDSAGEHYYICTFGRHCQ------AGQKLAITVSAT 132 (217)
Q Consensus 100 ~v~L~~~G~~YFiC~v~gHC~------~GmKl~I~V~~~ 132 (217)
.|+.+++|.++|.|-+..||. .||...|.+...
T Consensus 240 ~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 240 IIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 567788999999999999963 578888888643
No 109
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=22.45 E-value=20 Score=26.16 Aligned_cols=44 Identities=20% Similarity=0.557 Sum_probs=29.7
Q ss_pred ceEEEecCC--C-CCCCCC--CCCCCCc----cccccCCceeeCCEEEEEEeC
Q 036938 25 QTVHVVGDS--M-GWSIPT--SGGAGAY----NNWAATKNFVVGDVLTFNFVT 68 (217)
Q Consensus 25 A~~y~VGg~--~-GW~~~p--~~~~~~Y----t~WAs~ktF~VGDtLvF~y~~ 68 (217)
...|+||+. . .|+... +.....| ..|.....+..|..++|||--
T Consensus 21 e~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v 73 (108)
T 1ac0_A 21 ENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIR 73 (108)
T ss_dssp CCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEE
T ss_pred CEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEE
Confidence 356889974 3 498541 1122334 789888888889889999964
No 110
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=22.23 E-value=43 Score=34.08 Aligned_cols=77 Identities=13% Similarity=0.140 Sum_probs=50.2
Q ss_pred CCceeeCCEEEEEEeCC-----CCcEEEecCCCCCCCCCCCCC---CCCccCCC---ceEEeCCCCcEEEEcCCCCCCCC
Q 036938 53 TKNFVVGDVLTFNFVTN-----EHDVLRVPKASYDGCTSSNPI---GNPITTGP---ANITLDSAGEHYYICTFGRHCQA 121 (217)
Q Consensus 53 ~ktF~VGDtLvF~y~~~-----~HsVv~Vs~~~Y~~C~~~~~i---~~~~ssG~---~~v~L~~~G~~YFiC~v~gHC~~ 121 (217)
..+++.|++++|++-+. .|++.. ....+. .++. ......|. ..|+.+++|.|+|.|-...|=+.
T Consensus 272 ~l~v~~Ge~vRlRliNag~~~~~~~~~i-~Gh~f~----v~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~ 346 (1065)
T 2j5w_A 272 GLSMCAEDRVKWYLFGMGNEVDVHAAFF-HGQALT----NKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKA 346 (1065)
T ss_dssp CCEEETTCEEEEEEEECSSTTCCEEEEE-TTCCEE----ETTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHT
T ss_pred ceEECCCCEEEEEEEcCCcccceeEEEE-cCCEEE----ECCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhC
Confidence 46789999999999652 233332 222222 0111 01122343 36788889999999999999899
Q ss_pred CCeEEEEeeCCCC
Q 036938 122 GQKLAITVSATPG 134 (217)
Q Consensus 122 GmKl~I~V~~~~~ 134 (217)
||...+.|.....
T Consensus 347 Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 347 GLQAFFQVQECNK 359 (1065)
T ss_dssp TCEEEEEEECSCC
T ss_pred CCEEEEEEecCCC
Confidence 9999999986443
No 111
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=20.06 E-value=44 Score=25.43 Aligned_cols=18 Identities=33% Similarity=0.536 Sum_probs=15.3
Q ss_pred ccCCceeeCCEEEEEEeC
Q 036938 51 AATKNFVVGDVLTFNFVT 68 (217)
Q Consensus 51 As~ktF~VGDtLvF~y~~ 68 (217)
+..+..++||.|+|....
T Consensus 87 V~~~~L~~GD~~~F~~~~ 104 (130)
T 1wid_A 87 VKEKNLRAGDVVSFSRSN 104 (130)
T ss_dssp HHHTTCCTTCEEEEEECC
T ss_pred HHHcCCCCCCEEEEEEec
Confidence 566788999999999876
Done!