BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036939
(215 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZU38|RPIA_ARATH Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana
GN=At2g01290 PE=2 SV=1
Length = 265
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/245 (54%), Positives = 162/245 (66%), Gaps = 47/245 (19%)
Query: 17 LSSLSPTSVGLTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKN 76
++S P + LTQDELK+IAA K+VEFV+SGMV+GLGT STA HAVD+IGELL QGKL+N
Sbjct: 21 VASSPPQPMNLTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLEN 80
Query: 77 IVGIPTSKTTHDQAVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------ 118
IVGIPTSK T +QA+SLGIPLSDLD+HPVIDL+IDGADEVDP
Sbjct: 81 IVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMI 140
Query: 119 -----------------------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLR--- 152
LA+PVE+VP CWKFTA + L + GC A LR
Sbjct: 141 EGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGE 200
Query: 153 --TCYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
+ NGN I+D++ ++D+GD+ S+ ILRL GVVEHGMFLDMA+TVII G+LGV
Sbjct: 201 KGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRL-PGVVEHGMFLDMASTVIIAGELGV 259
Query: 211 TIKNK 215
IKNK
Sbjct: 260 KIKNK 264
>sp|B8FL28|RPIA_DESAA Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=rpiA PE=3 SV=1
Length = 230
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 115/230 (50%), Gaps = 55/230 (23%)
Query: 28 TQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTH 87
+QD LKK AA K+VE+++SGMVVGLG+ STAT A+ I L+ +GKLK+IVGIP+S T
Sbjct: 3 SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62
Query: 88 DQAVSLGIPLSDLDSHPVIDLAIDGADEVDPGL--------------------------- 120
+ A SLGIPL + H VID+ IDGADEVDP L
Sbjct: 63 EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122
Query: 121 -------------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRT-----CYEKHNGNC 162
A+PVEVVP + RF + G +R ++ N N
Sbjct: 123 DESKISDKLGTIFALPVEVVPFATA-SETRF---LESLGAKVTVRENQLGKAFKTDNHNR 178
Query: 163 IIDLYFKKDIGDME--VASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
I+D D G M+ V L AGVVEHG+FL VI+ G G+
Sbjct: 179 ILD----ADFGPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224
>sp|Q72J47|RPIA_THET2 Ribose-5-phosphate isomerase A OS=Thermus thermophilus (strain HB27
/ ATCC BAA-163 / DSM 7039) GN=rpiA PE=1 SV=1
Length = 227
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 108/220 (49%), Gaps = 42/220 (19%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+ KK AA+ ++ +V+ GMVVGLGT STA +AV ++ L +G+LK +VG+PTS+ T +
Sbjct: 6 ESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEEL 65
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA---------------------------- 121
A GIPL DL V DLAIDGADE+ PGLA
Sbjct: 66 AKREGIPLVDLPPEGV-DLAIDGADEIAPGLALIKGMGGALLREKIVERAAKEFIVIADH 124
Query: 122 -----------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHNGNCIIDLYFKK 170
VPVE+VP ++ T DL + Y G+ I D F
Sbjct: 125 TKKVPVLGRGPVPVEIVPFGYRATLKAIADLGGEPELRMDGDEFYFTDGGHLIADCRFGP 184
Query: 171 DIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
IGD + +R L I GVVE G+F+ MAT ++ G GV
Sbjct: 185 -IGD-PLGLHRALLEIPGVVETGLFVGMATRALVAGPFGV 222
>sp|Q5SIR5|RPIA_THET8 Ribose-5-phosphate isomerase A OS=Thermus thermophilus (strain HB8
/ ATCC 27634 / DSM 579) GN=rpiA PE=3 SV=1
Length = 227
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 108/220 (49%), Gaps = 42/220 (19%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+ KK AA+ ++ +V+ GMVVGLGT STA +AV ++ L +G+LK +VG+PTS+ T +
Sbjct: 6 ESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEEL 65
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA---------------------------- 121
A GIPL DL V DLAIDGADE+ PGLA
Sbjct: 66 AKREGIPLVDLPPEGV-DLAIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADH 124
Query: 122 -----------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHNGNCIIDLYFKK 170
VPVE+VP ++ T DL + Y G+ I D F
Sbjct: 125 TKKVPVLGRGPVPVEIVPFGYRATLKAIADLGGEPELRMDGDEFYFTDGGHLIADCRFGP 184
Query: 171 DIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
IGD + +R L I GVVE G+F+ MAT ++ G GV
Sbjct: 185 -IGD-PLGLHRALLEIPGVVETGLFVGMATRALVAGPFGV 222
>sp|Q7V003|RPIA_PROMP Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rpiA PE=3 SV=1
Length = 231
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 113/226 (50%), Gaps = 58/226 (25%)
Query: 32 LKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAV 91
+K+I A+ ++E V+ GM++GLG+ STA + + E + GKLKNI G+PTS + A+
Sbjct: 1 MKQIVADSAIEEVEDGMILGLGSGSTAALMIKSLAEKIRSGKLKNIKGVPTSFQSEVLAL 60
Query: 92 SLGIPLSDLDSHPVIDLAIDGADEVDPGLA------------------------------ 121
L IPL DL S P IDLAIDGADEVDP
Sbjct: 61 ELNIPLIDLASVPYIDLAIDGADEVDPDFQLIKGGGACHVREKLVASKANKLLIVIDESK 120
Query: 122 ----------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNCIID 165
+PVEV+P WK + D+ + V+ LR +K GN I+D
Sbjct: 121 LVQNLNQVFPLPVEVMPSAWK----QVKDIISEMSGVSNLRMATKKAGPVVTDQGNLILD 176
Query: 166 LYFK---KDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKL 208
+ F +D D+E+ N I GV+E+G+F+D+A V +VGK+
Sbjct: 177 VLFDAGIRDPKDLEMRINN----IPGVLENGLFVDLADKV-LVGKI 217
>sp|Q9V0L6|RPIA_PYRAB Ribose-5-phosphate isomerase A OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpiA PE=3 SV=1
Length = 229
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 56/229 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+E+KKIAA ++++F++ MV+GLGT ST + + +G+++ +G++ +IVG+PTS +
Sbjct: 4 EEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIRLLGDMIKKGEVSDIVGVPTSYQSRLL 63
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
A+ GIP++ LD ID+A+DGADEVDP L
Sbjct: 64 AIESGIPVATLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIESRAGMFIVLVDE 123
Query: 121 -----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNCI 163
VP+EV+P W+ +F AKLR K NGN I
Sbjct: 124 RKLVDYLCQKMPVPIEVIPQAWRAIVEEL-SIFN---AEAKLRMGVNKDGPVITDNGNFI 179
Query: 164 IDLYFKK--DIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
ID F + D DME+ N I GVVE+G+F D+A VI+ K GV
Sbjct: 180 IDAKFPRIDDPLDMEIELNT----IPGVVENGIFADIADIVIVGTKEGV 224
>sp|Q5FQ98|RPIA_GLUOX Ribose-5-phosphate isomerase A OS=Gluconobacter oxydans (strain
621H) GN=rpiA PE=3 SV=1
Length = 231
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 55/225 (24%)
Query: 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92
K+ AA ++ + VKSGMVVGLGT STA + ++++GE + +G I GIPTS + D+A+
Sbjct: 10 KRTAAREAADMVKSGMVVGLGTGSTAAYMIERLGERVAEGL--EIFGIPTSDDSEDKALK 67
Query: 93 LGIPLSDLDSHPVIDLAIDGADEVDPG--------------------------------- 119
GIPL+D +H ID+AIDGADEV G
Sbjct: 68 AGIPLTDFSAHRRIDIAIDGADEVQRGSLNLIKGLGGALLREKIVAQAAKRFVVIVDGTK 127
Query: 120 --------LAVPVEVVPVCWKFTANRFPDLFKDCGCVA-KLRT-----CYEKHNGNCIID 165
VPVEV+ W+ TA R CG K RT + GN I+D
Sbjct: 128 PVDLLGERAPVPVEVISFGWECTAER----LAACGARGVKPRTDRAGSLFVTDTGNMILD 183
Query: 166 LYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
+F I E + +I R++ GVVEHGMFL+MA+ V++ GV
Sbjct: 184 CHFGP-IEKPEELAEKIDRIV-GVVEHGMFLNMASEVLVATPDGV 226
>sp|Q8EN78|RPIA1_OCEIH Ribose-5-phosphate isomerase A 1 OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=rpiA1 PE=3 SV=1
Length = 224
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 108/228 (47%), Gaps = 50/228 (21%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
QD+LKK K+ VK GM VGLG+ ST + +GE + Q LK I GIP+S T
Sbjct: 4 QDKLKKAVGEKAATMVKDGMKVGLGSGSTVYWMIRSLGERIQQDGLK-IEGIPSSNQTAT 62
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDPG----------------------------- 119
A GIPL+D + +D+ IDGADEVD
Sbjct: 63 WAEEAGIPLTDFSNVKELDITIDGADEVDANNHLIKGGGAALFREKIIAQAAKEFVIIVD 122
Query: 120 ----------LAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK----HNGNCIID 165
++PVEV+P W+ TAN L GCV +R E+ NGN I+D
Sbjct: 123 QSKVVETLGEFSLPVEVLPFSWQRTANEISKL----GCVPTVRVHEEEPLVTDNGNYILD 178
Query: 166 LYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIK 213
FK + N+ ++ I GV+E G+F+DMATTVI+ K + IK
Sbjct: 179 CPFK--VIPHPDKLNKEIKSIVGVIETGLFIDMATTVIVGEKDNIYIK 224
>sp|Q2JSC9|RPIA_SYNJA Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain
JA-3-3Ab) GN=rpiA PE=3 SV=1
Length = 230
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 110/229 (48%), Gaps = 53/229 (23%)
Query: 28 TQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTH 87
+ DELK+ AA + + V+SGMVVGLGT STA AV + + + + L+ +G+PTS+ T
Sbjct: 3 SADELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGLQ-FIGVPTSERTA 61
Query: 88 DQAVSLGIPLSDLDSHPVIDLAIDGADEVDPG---------------------------- 119
+QA SLGIPL+ L+ P +DLAIDGADE++ G
Sbjct: 62 EQARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIII 121
Query: 120 -------------LAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTC-----YEKHNGN 161
VPVEVV WK T R L GC A LR Y +
Sbjct: 122 ADASKKVAHLGTRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQH 177
Query: 162 CIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
I+D F ++A L+ GVVEHG+F+ MAT II G G+
Sbjct: 178 YILDCQFGPIANPAKLAEQ--LKGTVGVVEHGLFIGMATEAIIAGPEGI 224
>sp|O50083|RPIA_PYRHO Ribose-5-phosphate isomerase A OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpiA PE=1 SV=1
Length = 229
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 56/229 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+E+KKIAA ++++F++ MV+GLGT ST + + +GE L +G++ +IVG+PTS
Sbjct: 4 EEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLL 63
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
A+ IP++ LD ID+A+DGADEVDP L
Sbjct: 64 AIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDE 123
Query: 121 -----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNCI 163
VP+EV+P WK +F A+LR K NGN I
Sbjct: 124 RKLVDYLCQKMPVPIEVIPQAWKAIIEEL-SIF---NAKAELRMGVNKDGPVITDNGNFI 179
Query: 164 IDLYFKK--DIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
ID F + D DME+ N I GV+E+G+F D+A VI+ + GV
Sbjct: 180 IDAKFPRIDDPLDMEIELNT----IPGVIENGIFADIADIVIVGTREGV 224
>sp|Q5JH26|RPIA_PYRKO Ribose-5-phosphate isomerase A OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rpiA PE=3 SV=1
Length = 229
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 112/223 (50%), Gaps = 56/223 (25%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+E+KK A ++++F++ MVVGLGT ST + ++ +G+LL +G+L+++ G+PTS
Sbjct: 4 EEMKKAVAKEALKFIEDEMVVGLGTGSTTAYFINYLGKLLMEGELEDVYGVPTSHQARLL 63
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------- 118
A+ GIP+ LD ID+A+DGADEVDP
Sbjct: 64 ALEAGIPVVSLDEVDAIDIAVDGADEVDPHMNLIKGRGAALTMEKIIEYRAGMFIVLVDE 123
Query: 119 ---------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNCI 163
+ VP+EV+P W+ A ++F A+LR +K NGN I
Sbjct: 124 SKLVEYLGQKMPVPIEVIPAAWRAIAEEL-EVFN---ATAELRMAVKKDGPVVTDNGNFI 179
Query: 164 IDLYFKK--DIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
+D F + D D+E+ N I GVVE+G+F D+A +++
Sbjct: 180 LDAKFARIEDPLDLEIELNT----IPGVVENGIFADIADIILV 218
>sp|Q8E4Y6|RPIA_STRA3 Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype
III (strain NEM316) GN=rpiA PE=3 SV=1
Length = 223
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 111/229 (48%), Gaps = 50/229 (21%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
DELKK+A + ++VK+GM+VGLGT STA V++IG + + L+ +VG+ TS T +Q
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------- 118
A LGIPL D VID+ +DGADEVDP
Sbjct: 61 ARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDE 120
Query: 119 --------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTC----YEKHNGNCIIDL 166
+PVEVV ++ + R +FK G R + GN IIDL
Sbjct: 121 SKLVETLGAFKLPVEVV----RYGSERLFRVFKSKGYCPSFRETEGDRFITDMGNYIIDL 176
Query: 167 YFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215
KK I D + +N + + GVVEHG+F M VI+ GK G+ I K
Sbjct: 177 DLKK-IEDPKQLANELDHTV-GVVEHGLFNSMVNKVIVAGKNGLDILEK 223
>sp|Q8DZC6|RPIA_STRA5 Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype
V (strain ATCC BAA-611 / 2603 V/R) GN=rpiA PE=3 SV=1
Length = 223
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 111/229 (48%), Gaps = 50/229 (21%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
DELKK+A + ++VK+GM+VGLGT STA V++IG + + L+ +VG+ TS T +Q
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------- 118
A LGIPL D VID+ +DGADEVDP
Sbjct: 61 ARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDE 120
Query: 119 --------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTC----YEKHNGNCIIDL 166
+PVEVV ++ + R +FK G R + GN IIDL
Sbjct: 121 SKLVETLGAFKLPVEVV----RYGSERLFRVFKSKGYCPSFRETEGDRFITDMGNYIIDL 176
Query: 167 YFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215
KK I D + +N + + GVVEHG+F M VI+ GK G+ I K
Sbjct: 177 DLKK-IEDPKQLANELDHTV-GVVEHGLFNGMVNKVIVAGKNGLDILEK 223
>sp|Q9CDI7|RPIA_LACLA Ribose-5-phosphate isomerase A OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=rpiA PE=3 SV=1
Length = 224
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 110/230 (47%), Gaps = 51/230 (22%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
D LKK K+ EFVKSGMVVGLGT STA + V+++G + + +L+ I G+ TS T Q
Sbjct: 2 DNLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRIAEEQLE-ITGVTTSNVTSSQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
A +LGIPL+ +D +DL +DGADE+D L
Sbjct: 61 ARALGIPLASIDEVDYVDLTVDGADEIDSSLNGIKGGGAALLMEKIVATYSKDYIWIVDE 120
Query: 121 ----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHN-----GNCIID 165
+PVEV+P + + + F+ G R E + IID
Sbjct: 121 SKLSENLGSFKIPVEVIP----YGSQQVFKKFEAAGYAPTWRLNEENERLITDMHHFIID 176
Query: 166 LYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215
L+ + I + E + L L+ GVVEHG+F +M VI+ G GV I NK
Sbjct: 177 LHISQ-IKEPEKLAEE-LDLMGGVVEHGLFNNMVKKVIVAGNEGVRIINK 224
>sp|Q318Q3|RPIA_PROM9 Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain
MIT 9312) GN=rpiA PE=3 SV=1
Length = 237
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 114/230 (49%), Gaps = 58/230 (25%)
Query: 28 TQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTH 87
+Q ++K+I A ++E VKS M++GLG+ STA + + + + GKL+NI G+ TS +
Sbjct: 3 SQTQMKQIVAEAAIEEVKSDMILGLGSGSTAVLMIKSLADAIRSGKLQNIKGVATSFQSE 62
Query: 88 DQAVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA-------------------------- 121
A+ L IPL DL S IDLAIDGADEVDPG
Sbjct: 63 VLALELDIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKANQLLIVV 122
Query: 122 --------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGN 161
+PVEV+P WK + ++ + ++ LR +K GN
Sbjct: 123 DETKLVRKLNQSFPLPVEVLPNAWK----QVQEVISEMNGISTLRMATKKAGPVVTDQGN 178
Query: 162 CIIDLYFK---KDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKL 208
I+D+ F K+ D+E + N I GV+E+G+F+D+ T ++VGK+
Sbjct: 179 LILDVLFNDGIKNPKDIEKSINN----IPGVLENGLFIDL-TDKVLVGKI 223
>sp|A7NNA4|RPIA_ROSCS Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain
DSM 13941 / HLO8) GN=rpiA PE=3 SV=1
Length = 234
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 107/222 (48%), Gaps = 49/222 (22%)
Query: 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92
++ AA +++++V+SGM +GLGT STA+ + + L G+L+ +VG+PTS+ T A
Sbjct: 7 RRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARE 66
Query: 93 LGIPLSDLDSHPVIDLAIDGADEVDPGL-------------------------------- 120
LGIPL+ LD HP +DLA+DGADE+DP L
Sbjct: 67 LGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKR 126
Query: 121 --------AVPVEVV----PVCWKFTANRFPDLFKDCGCVAKLRTCYEKHNGNCIIDLYF 168
+PVEVV P+C + A + C + GN I+D +F
Sbjct: 127 VERLGERSPLPVEVVTFGMPLCIRRLAALGGEPVLRCDHSG---APFVTDEGNLILDCHF 183
Query: 169 KKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
I D E + I I GVV HG+FL MA+ +I G G+
Sbjct: 184 GV-IADPEALAAAIC-AIPGVVAHGLFLGMASLAVIAGPDGI 223
>sp|Q3K0S0|RPIA_STRA1 Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype
Ia (strain ATCC 27591 / A909 / CDC SS700) GN=rpiA PE=3
SV=1
Length = 223
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 110/229 (48%), Gaps = 50/229 (21%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
DELKK+A + ++VK+GM+VGLGT STA V++IG + + L+ +VG+ TS T +Q
Sbjct: 2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------- 118
A L IPL D VID+ +DGADEVDP
Sbjct: 61 ARGLAIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDE 120
Query: 119 --------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTC----YEKHNGNCIIDL 166
+PVEVV ++ + R +FK G R + GN IIDL
Sbjct: 121 SKLVETLGAFKLPVEVV----RYGSERLFRVFKSKGYCPSFRETEGDRFITDMGNYIIDL 176
Query: 167 YFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215
KK I D + +N + + GVVEHG+F M VI+ GK G+ I K
Sbjct: 177 DLKK-IEDPKQLANELDHTV-GVVEHGLFNGMVNKVIVAGKNGLDILEK 223
>sp|Q8U1F0|RPIA_PYRFU Ribose-5-phosphate isomerase A OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpiA PE=3 SV=1
Length = 229
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 56/229 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+E+KK A ++EF++ MVVGLGT ST + + +GE++ +GK+++I G+P
Sbjct: 4 EEMKKAVARAALEFIEDDMVVGLGTGSTTAYFIRYLGEMIEKGKVEDIYGVPPPIKQKFL 63
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
+ G+P+ LD ID+A+DGADEVDP L
Sbjct: 64 RMESGVPVLSLDQVDAIDIAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDE 123
Query: 121 -----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNCI 163
VP+EV+P WK +F A+LR +K NGN I
Sbjct: 124 SKLVDYLCQKMPVPIEVIPAAWKAILEEL-SIF---NAKAELRMGVKKDGPVVTENGNFI 179
Query: 164 IDLYFKK--DIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
ID F + D DME+ N I GVVE+G+F D+A V++ K GV
Sbjct: 180 IDAKFPRIDDPLDMEIELNT----IPGVVENGIFADIADIVLVGTKEGV 224
>sp|Q81CG8|RPIA_BACCR Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=rpiA PE=3 SV=1
Length = 220
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 99/222 (44%), Gaps = 50/222 (22%)
Query: 32 LKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAV 91
LK++A + FV GM +GLGT ST + K+GE + +G + +PTSK T A
Sbjct: 3 LKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEGL--SFQAVPTSKETEALAQ 60
Query: 92 SLGIPLSDLDSHPVIDLAIDGADEVDPGLA------------------------------ 121
L IPL L+ +DL IDGADE+D L
Sbjct: 61 QLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESK 120
Query: 122 ---------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLR----TCYEKHNGNCIIDLYF 168
+P+E++P WK T N+ L GC LR Y N N IID F
Sbjct: 121 LVTHLGTFPLPIEIIPFSWKQTENKIQSL----GCQTTLRLKNNETYITDNNNMIIDCIF 176
Query: 169 KKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
I + V + L++I GVVE G+F+ M +T II K G+
Sbjct: 177 PNHISN-PVHLHTQLKMITGVVETGLFISMTSTAIIGTKNGI 217
>sp|Q8EMZ1|RPIA2_OCEIH Ribose-5-phosphate isomerase A 2 OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=rpiA2 PE=3 SV=1
Length = 224
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 50/215 (23%)
Query: 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92
K+IAA ++V ++K GMV+G+G+ ST + + + + +L+ +VGIP SK + A
Sbjct: 6 KQIAAQEAVRYIKDGMVIGIGSGSTVNEFLYCLAARMRKERLQ-VVGIPASKKSERLATE 64
Query: 93 LGIPLSDLDSHPVIDLAIDGADEVDPGLA------------------------------- 121
LGIPL+ ++ +D+AIDG DE+D L
Sbjct: 65 LGIPLTTFATYQNVDIAIDGTDEIDDQLYLVKGGGGSLVREKMIDLVAETFIVIASGKKK 124
Query: 122 --------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYE----KHNGNCIIDLYFK 169
VPVEVVP W+ T R GC LR E N N IID F
Sbjct: 125 IKKLGSFPVPVEVVPFGWQATEQRLQQF----GCQTNLRMVEEDIFVSDNQNYIIDCDF- 179
Query: 170 KDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
K+I D E A +R L+ I GV+E G+F++M I+
Sbjct: 180 KEIDDAE-ALHRSLKQIVGVIETGIFINMVDKAIV 213
>sp|A5GNH7|RPIA_SYNPW Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain WH7803)
GN=rpiA PE=3 SV=1
Length = 238
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q+++K+ A+ +V+ + GMVVGLG+ STA + +GE L G+L +IVG+ TS
Sbjct: 5 QNQMKQAVADAAVQQFRDGMVVGLGSGSTAALMIKGLGERLAAGQLSDIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------ 118
A LGIPL L++ IDLAIDGADEVDP
Sbjct: 65 LAAELGIPLRSLNAVDRIDLAIDGADEVDPAFQLIKGGGACHVQEKLVAARADRFIVVVD 124
Query: 119 ----------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
G +PVEV+P W + + K G A+LR K GN
Sbjct: 125 STKLVERLNLGFLLPVEVLPGAWVQISQQ----LKAMGGDAELRMATRKAGPVVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D+ F+ I D + + + I GV+E+G+F+++A V++
Sbjct: 181 VLDVRFEGGIAD-PASLEKEINNIPGVLENGLFVNLADEVLV 221
>sp|B9KYD3|RPIA_THERP Ribose-5-phosphate isomerase A OS=Thermomicrobium roseum (strain
ATCC 27502 / DSM 5159 / P-2) GN=rpiA PE=3 SV=1
Length = 237
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 111/233 (47%), Gaps = 56/233 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+ K+ AA + V+ GM+VGLG+ STA AV +GE LH G ++G+ TS+ T
Sbjct: 4 ERAKERAARFAASLVEDGMIVGLGSGSTAELAVRALGERLHDGL--RLIGVATSQRTAAL 61
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP---GL-------------------------- 120
A +GI L D DS IDLAIDGADEV+ GL
Sbjct: 62 ARRVGIELRDPDSVDRIDLAIDGADEVEERSLGLLKGRGGALVREKLVARMARRLVIIID 121
Query: 121 ------------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTC------YEKHNGNC 162
+PVEVVP W++ A DL G LR C + NGN
Sbjct: 122 DSKLVAALGARFPLPVEVVPFGWRWCARWLEDL----GGRPTLR-CRPTGHPFRSDNGNL 176
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215
I+D+ F I D +R ++++ GV++HG+FLDMA VI+ + G+ + +
Sbjct: 177 ILDVAFGA-IAD-PAWLDRTIKMLPGVIDHGLFLDMADLVIVGSETGIRLLER 227
>sp|Q02VQ6|RPIA_LACLS Ribose-5-phosphate isomerase A OS=Lactococcus lactis subsp.
cremoris (strain SK11) GN=rpiA PE=3 SV=1
Length = 224
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 111/223 (49%), Gaps = 43/223 (19%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+ LKK K+ EFVKSGMVVGLGT STA + V+++G + + +L+ I G+ TS T +Q
Sbjct: 2 ENLKKQVGIKAAEFVKSGMVVGLGTGSTAAYFVEELGRRVAEEQLE-ITGVTTSSVTSEQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP--------GLAVPVEVVPVCW---------- 131
A +LGIPL+ +D +DL +DGADE+D G A+ +E + +
Sbjct: 61 AKALGIPLASIDEVDYVDLTVDGADEIDSHLNGIKGGGAALLMEKIVATYSKDYIWIVDE 120
Query: 132 -KFTAN-----------RF--PDLFKDCGCVAKLRTCYEKHNG--------NCIIDLYFK 169
K + N R+ LFK+ A T G + IIDL+
Sbjct: 121 SKLSENLGSFKVPVEVIRYGSEQLFKEFERAAYAPTWRLNEEGEKLITDMQHFIIDLHIA 180
Query: 170 KDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
K ++A L L+ GVVEHG+F DM VI+ G GV I
Sbjct: 181 KIENPQKLADE--LDLMVGVVEHGLFNDMVKKVIVAGSDGVKI 221
>sp|Q7VA25|RPIA_PROMA Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=rpiA PE=3 SV=1
Length = 237
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 54/235 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K A +++ +K GM++GLG+ STA + +GE L +G LK I+G+PTS
Sbjct: 5 QTQMKIAVAQEAIGEIKDGMILGLGSGSTAALMIKSLGEKLKEGSLKEIIGVPTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA--------------------------- 121
A LGIPL + IDLAIDGADEVDP
Sbjct: 65 LASQLGIPLRAFSAVSKIDLAIDGADEVDPNFQLIKGGGACHVQEKLVASIADRFVVVVD 124
Query: 122 -------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
+PVEV+P WK DL G + LR +K GN
Sbjct: 125 STKIVEKLNLEFKLPVEVLPAAWKLVQKELNDL----GAKSDLRMAEKKAGPIVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKL--GVTIKNK 215
++D+ F I D + +I GV+E+G+F+++ T ++VG++ GV+ N+
Sbjct: 181 VLDVQFADGISDPQNLEKQINNF-PGVLENGLFVNL-TDEVLVGEIKNGVSSVNR 233
>sp|Q63AF7|RPIA_BACCZ Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ZK /
E33L) GN=rpiA PE=3 SV=1
Length = 220
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 101/223 (45%), Gaps = 50/223 (22%)
Query: 31 ELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQA 90
+LK+IA + FVK GM +GLGT STA + K+G+ + +G +I +PTSK T A
Sbjct: 2 DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGL--SIQAVPTSKETEALA 59
Query: 91 VSLGIPLSDLDSHPVIDLAIDGADEVDPGLA----------------------------- 121
L IPL L+ +DL IDGADE+D L
Sbjct: 60 QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIIDES 119
Query: 122 ----------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLR----TCYEKHNGNCIIDLY 167
+P+E++P WK T ++ L GC LR + N N IID
Sbjct: 120 KVVTRLGTFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCI 175
Query: 168 FKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
F I R L++I GVVE G+F++M + II K G+
Sbjct: 176 FPNHIPTPSDLHKR-LKMITGVVETGLFVNMTSKAIIGTKNGI 217
>sp|Q81PL1|RPIA_BACAN Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3
SV=1
Length = 220
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 101/223 (45%), Gaps = 50/223 (22%)
Query: 31 ELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQA 90
+LK+IA + FVK GM +GLGT STA + K+G+ + +G +I +PTSK T A
Sbjct: 2 DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGL--SIQAVPTSKETEALA 59
Query: 91 VSLGIPLSDLDSHPVIDLAIDGADEVDPGLA----------------------------- 121
L IPL L+ +DL IDGADE+D L
Sbjct: 60 QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDES 119
Query: 122 ----------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLR----TCYEKHNGNCIIDLY 167
+P+E++P WK T ++ L GC LR + N N IID
Sbjct: 120 KVVTRLGTFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCI 175
Query: 168 FKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
F I R L++I GVVE G+F++M + II K G+
Sbjct: 176 FPNHIPTPSDLHKR-LKMITGVVETGLFVNMTSKAIIGTKNGI 217
>sp|Q92D46|RPIA_LISIN Ribose-5-phosphate isomerase A OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=rpiA PE=3 SV=1
Length = 224
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 106/219 (48%), Gaps = 53/219 (24%)
Query: 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92
KKIA K+ E+++ GMVVGLGT ST + ++K+GE++ +G NI G+ TS T QA +
Sbjct: 5 KKIAGEKACEWIEDGMVVGLGTGSTVYYTIEKLGEMVQKG--LNITGVSTSIETEQQART 62
Query: 93 LGIPLSDLDSHPVIDLAIDGADEVDPGLA------------------------------- 121
LGIPL L+ ID+ IDGADE++
Sbjct: 63 LGIPLKSLNDVTKIDVTIDGADEINQAFQGIKGGGGALLREKMVAQASSKNIWVVGEEKL 122
Query: 122 --------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLR-----TCYEKHNGNCIIDLYF 168
+P+EV+P WK + + ++ G LR YE +NGN I+D+
Sbjct: 123 VTELGKFPLPLEVIPFGWK----QIKRMLENDGVETTLRKQSSGEIYETNNGNYILDI-I 177
Query: 169 KKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGK 207
+ + E A + L I GV+EHG+FL +II GK
Sbjct: 178 NQTFTNPE-AWHEKLAGIPGVLEHGLFLHYV-DIIICGK 214
>sp|Q6HHU6|RPIA_BACHK Ribose-5-phosphate isomerase A OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=rpiA PE=3 SV=1
Length = 220
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 101/223 (45%), Gaps = 50/223 (22%)
Query: 31 ELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQA 90
+LK+IA + FVK GM VGLGT STA + K+G+ + +G +I +PTSK T A
Sbjct: 2 DLKQIAGEYAATFVKDGMKVGLGTGSTAYWTIQKLGQRVKEGL--SIQAVPTSKETEALA 59
Query: 91 VSLGIPLSDLDSHPVIDLAIDGADEVDPGLA----------------------------- 121
L IPL L+ +DL IDGADE+D L
Sbjct: 60 QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDES 119
Query: 122 ----------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLR----TCYEKHNGNCIIDLY 167
+P+E++P WK T ++ L GC LR + N N I+D
Sbjct: 120 KVVTRLGTFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIVDCI 175
Query: 168 FKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
F I R L++I GVVE G+F++M + II K G+
Sbjct: 176 FPNHIPTPSDLHKR-LKMITGVVETGLFVNMTSKAIIGTKNGI 217
>sp|Q7V5N8|RPIA_PROMM Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain
MIT 9313) GN=rpiA PE=3 SV=1
Length = 238
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 105/222 (47%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K+ A +VE +K GMV+GLG+ STA + +G L G+L++IVG+ TS
Sbjct: 5 QTQMKQAVAAAAVEQIKDGMVLGLGSGSTAALMIQALGAKLASGELRDIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------ 118
A LGIPL +L + IDLAIDGADEVDP
Sbjct: 65 MAAELGIPLRNLTAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVASRADRFVVVVD 124
Query: 119 ----------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
G +PVEV+P W+ R +L G +A LR K GN
Sbjct: 125 STKIVDRLNLGFLLPVEVLPGAWRQVQGRLAEL----GGIADLRMAQCKAGPVVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D+ IGD E RI L GV+E+G+F+++ V++
Sbjct: 181 VLDVSMAGGIGDPEDLECRINNL-PGVLENGLFVNLTDEVLV 221
>sp|A8AXN9|RPIA_STRGC Ribose-5-phosphate isomerase A OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpiA PE=3
SV=1
Length = 225
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 106/232 (45%), Gaps = 62/232 (26%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+ LKK+A K+ EFV GMVVGLGT STA + V++IG + + L+ I+ + TS T Q
Sbjct: 2 ENLKKMAGIKAAEFVTDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQ-IIAVTTSSVTSQQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------- 118
A LGIPL +D ++D+ +DGADEVDP
Sbjct: 61 AEGLGIPLKSIDEVDLVDVTVDGADEVDPNFNGIKGGGGALLMEKVVATPTKSYIWVVDE 120
Query: 119 --------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHNG--------NC 162
+PVEVV + RF A + + + +G N
Sbjct: 121 SKLVEKLGAFKLPVEVVQYGAEQVFRRFER--------AGYKPAFRQKDGQRFVTDMKNF 172
Query: 163 IIDLYFKKDIGDME--VASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
IIDL D+G +E + R L I G+VEHG+F M VI+ GK GV +
Sbjct: 173 IIDL----DLGVIENPIEFARELDHIVGIVEHGLFNQMVDKVIVAGKAGVQV 220
>sp|A2C6S4|RPIA_PROM3 Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain
MIT 9303) GN=rpiA PE=3 SV=1
Length = 238
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 104/222 (46%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K+ A +VE +K GMV+GLG+ STA + +G L G+L+ IVG+ TS
Sbjct: 5 QTQMKQAVAAAAVEQIKDGMVLGLGSGSTAALMIQALGAKLASGELREIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------ 118
A LGIPL +L + IDLAIDGADEVDP
Sbjct: 65 MAAELGIPLRNLTAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVASRADRFVVVVD 124
Query: 119 ----------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
G +PVEV+P W+ R +L G +A LR K GN
Sbjct: 125 STKIVDRLNLGFLLPVEVLPGAWRQVQGRLAEL----GGIADLRMAQCKAGPVVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D+ IGD E RI L GV+E+G+F+++ V++
Sbjct: 181 VLDVSMAGGIGDPEDLECRINNL-PGVLENGLFVNLTDEVLV 221
>sp|A5UXC5|RPIA_ROSS1 Ribose-5-phosphate isomerase A OS=Roseiflexus sp. (strain RS-1)
GN=rpiA PE=3 SV=1
Length = 233
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 100/223 (44%), Gaps = 51/223 (22%)
Query: 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92
++ AA ++ V+SGM +GLGT STAT + + L G+L+ + G+PTS+ T A
Sbjct: 7 RQRAAEHALRHVESGMTIGLGTGSTATFMLYGLAARLADGRLQRVTGVPTSEVTAALARE 66
Query: 93 LGIPLSDLDSHPVIDLAIDGADEVDPGL-------------------------------- 120
LGIPL+ LD P +DLA+DGADE+DP L
Sbjct: 67 LGIPLTTLDRQPHLDLALDGADEIDPQLRLIKGLGGAMLREKIVAASAARFVVMAAVSKC 126
Query: 121 --------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLR-----TCYEKHNGNCIIDLY 167
+PVEVV A R K G LR + GN I+D
Sbjct: 127 VERLGERSPLPVEVVAFGLPLCARR----LKALGGAPALRRDRSGAPFVTDEGNLILDCN 182
Query: 168 FKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
F I D E + I I GVV HG+FL MA+ +I G G+
Sbjct: 183 FGI-IADPEALAASIC-AIPGVVAHGLFLGMASLAVIAGPDGI 223
>sp|Q0I7L2|RPIA_SYNS3 Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain CC9311)
GN=rpiA PE=3 SV=1
Length = 238
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K+ A +V ++ GMVVGLG+ STA ++ +G L G+L++IVG+ TS
Sbjct: 5 QTQMKQAVAEAAVAQIRDGMVVGLGSGSTAALMIEGLGARLAAGQLRDIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA--------------------------- 121
A LGIPL L++ IDLAIDGADEVDP
Sbjct: 65 LAAELGIPLRALNATDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVADRAERFIVVVD 124
Query: 122 -------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
+PVEV+P W +R K G VA+LR K GN
Sbjct: 125 STKLVRCLNLDFLLPVEVLPGAWVQVQSR----LKSMGGVAELRMATRKAGPVVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D+ F+ I D +A R + + GV+E+G+F+++A V++
Sbjct: 181 VLDVRFENGISD-PIALERDINNLPGVLENGLFVNLADEVLV 221
>sp|Q839H2|RPIA_ENTFA Ribose-5-phosphate isomerase A OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=rpiA PE=3 SV=1
Length = 226
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 51/217 (23%)
Query: 32 LKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAV 91
LK++ ++ ++V+ GM+VGLGT STA VD+IG + + L +IVG+ TSK T QA+
Sbjct: 3 LKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGL-SIVGVTTSKETEKQAL 61
Query: 92 SLGIPLSDLDSHPVIDLAIDGADEVDP--------------------------------- 118
+LGIPL +D P +DL IDGADE+
Sbjct: 62 ALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKSK 121
Query: 119 ------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHN-----GNCIIDLY 167
+PVEVVP + + + LF++ G LR G+ IIDL+
Sbjct: 122 MVDDLGAFPLPVEVVP----YGSRQLVHLFEEKGYHPTLRLNAAGETLITDGGHHIIDLH 177
Query: 168 FKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
+K I D E + + L+ GVVEHG+FL+M + VI+
Sbjct: 178 LEK-ITDPEALGSYLDNLV-GVVEHGLFLNMVSMVIV 212
>sp|A7HS32|RPIA_PARL1 Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpiA PE=3
SV=1
Length = 231
Score = 100 bits (249), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 54/226 (23%)
Query: 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT 86
+ D+ KK AA +++EFVK GM +G+GT STA H V +GE + G +IVG+PTS+ T
Sbjct: 1 MNADDQKKAAAVRALEFVKPGMKLGMGTGSTAEHFVRALGEKVKAGL--DIVGVPTSERT 58
Query: 87 HDQAVSLGIPLSDLDSHPVIDLAIDGADEVDPGL-------------------------- 120
A SLGIPL++LD P +D+ +DGADE+D L
Sbjct: 59 AKLAASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVI 118
Query: 121 -------------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKH-------NG 160
+PVEV+P TA + ++ GC K+ +++ +
Sbjct: 119 ADASKLVKTLGSFPLPVEVIPFGSAVTARKIAEVASAHGCTGKMSRRADEYGEPFFTDSE 178
Query: 161 NCIIDLYFKK--DIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
N I D F D + A NR I GVV++G+F+ +A I+
Sbjct: 179 NFIYDCAFGSIPDPDGLSAALNR----IPGVVDNGLFIGIAAMAIV 220
>sp|B9LCG3|RPIA_CHLSY Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain
ATCC 29364 / DSM 637 / Y-400-fl) GN=rpiA PE=3 SV=1
Length = 239
Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 96/213 (45%), Gaps = 51/213 (23%)
Query: 43 FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDS 102
V+ GMV+GLG STA +A I E LHQG L +IVG+P ++ T A LGIPL+ LD
Sbjct: 20 LVRPGMVIGLGFGSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDE 79
Query: 103 HPVIDLAIDGADEVDPGL----------------------------------------AV 122
+DL IDGADEVDP L A+
Sbjct: 80 VAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPALGTRFAL 139
Query: 123 PVEVVPVCWKFTANRFPDLFKDCGCVAKLR-----TCYEKHNGNCIIDLYFKKDIGDMEV 177
P+EVV W+ TA + G +LR + GN I+D +
Sbjct: 140 PLEVVDFGWRATAR----WLEAQGGTVQLRLRADGQPFRTDQGNLILDWKCGPLNDPAAL 195
Query: 178 ASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
A+ R AG+VEHG+F+ +AT + + G GV
Sbjct: 196 AAQLSAR--AGIVEHGLFIGLATDLFVAGPDGV 226
>sp|A9WIA0|RPIA_CHLAA Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain
ATCC 29366 / DSM 635 / J-10-fl) GN=rpiA PE=3 SV=1
Length = 239
Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 96/213 (45%), Gaps = 51/213 (23%)
Query: 43 FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDS 102
V+ GMV+GLG STA +A I E LHQG L +IVG+P ++ T A LGIPL+ LD
Sbjct: 20 LVRPGMVIGLGFGSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDE 79
Query: 103 HPVIDLAIDGADEVDPGL----------------------------------------AV 122
+DL IDGADEVDP L A+
Sbjct: 80 VAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPALGTRFAL 139
Query: 123 PVEVVPVCWKFTANRFPDLFKDCGCVAKLR-----TCYEKHNGNCIIDLYFKKDIGDMEV 177
P+EVV W+ TA + G +LR + GN I+D +
Sbjct: 140 PLEVVDFGWRATAR----WLEAQGGTVQLRLRADGQPFRTDQGNLILDWKCGPLNDPAAL 195
Query: 178 ASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
A+ R AG+VEHG+F+ +AT + + G GV
Sbjct: 196 AAQLSAR--AGIVEHGLFIGLATDLFVAGPDGV 226
>sp|Q5LZM5|RPIA_STRT1 Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=rpiA PE=3 SV=1
Length = 226
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 107/229 (46%), Gaps = 55/229 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
DELKK+A + FV+ GMVVGLGT STA V++IG + + L ++VG+ TS T Q
Sbjct: 2 DELKKLAGVYAAGFVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGL-SVVGVTTSSQTTKQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
A LGIPL +D ID+ +DGADEVDP L
Sbjct: 61 AEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDE 120
Query: 121 ----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHN-----GNCIID 165
+PVEVV ++ A+R F+ G R + N IID
Sbjct: 121 SKMVDQLGAFKLPVEVV----QYGADRLYLDFESKGYKPSFRVTEQGDRFVTDMKNFIID 176
Query: 166 LYFKKDIGDME--VASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
L D+G + VA L+ + GVVEHG+F M VI+ GK GV I
Sbjct: 177 L----DLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKI 221
>sp|A9BCI0|RPIA_PROM4 Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain
MIT 9211) GN=rpiA PE=3 SV=1
Length = 237
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K+ A ++E + GMV+GLG+ STA + +G + G LK+IVG+ TS
Sbjct: 5 QTQMKEAVAKAAIEQIHDGMVLGLGSGSTAALMIKALGAKISSGHLKDIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA--------------------------- 121
A LGIPL L + IDLAIDGADEVD
Sbjct: 65 LATELGIPLQGLSAVSQIDLAIDGADEVDSNFQLIKGGGACHVQEKLVASLAERFVVVVD 124
Query: 122 -------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
+PVEV+P W+ N+ ++ G V++LR +K GN
Sbjct: 125 SSKIVKTLNLTFKLPVEVLPSAWQLVKNKIHEI----GGVSQLRMAQKKAGPIVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D+ F I D + +I I GV+E+G+F+++A V++
Sbjct: 181 VLDVTFAGGINDPQTLEKQI-NNIPGVLENGLFVNLADEVLV 221
>sp|Q03KJ8|RPIA_STRTD Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=rpiA PE=3 SV=1
Length = 226
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 107/229 (46%), Gaps = 55/229 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
DELKK+A + FV+ GMVVGLGT STA V++IG + + L ++VG+ TS T Q
Sbjct: 2 DELKKLAGVYAAGFVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGL-SVVGVTTSTQTTKQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
A LGIPL +D ID+ +DGADEVDP L
Sbjct: 61 AEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDE 120
Query: 121 ----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHN-----GNCIID 165
+PVEVV ++ A+R F+ G R + N IID
Sbjct: 121 SKMVDQLGAFKLPVEVV----QYGADRLYLDFESKGYKPSFRVTEQGDRFVTDMKNFIID 176
Query: 166 LYFKKDIGDME--VASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
L D+G + VA L+ + GVVEHG+F M VI+ GK GV I
Sbjct: 177 L----DLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKI 221
>sp|Q5M481|RPIA_STRT2 Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=rpiA PE=3 SV=1
Length = 226
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 107/229 (46%), Gaps = 55/229 (24%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
DELKK+A + FV+ GMVVGLGT STA V++IG + + L ++VG+ TS T Q
Sbjct: 2 DELKKLAGVYAAGFVEDGMVVGLGTGSTAYFFVEEIGRRIKEEGL-SVVGVTTSTQTTKQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPGL----------------------------- 120
A LGIPL +D ID+ +DGADEVDP L
Sbjct: 61 AEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDE 120
Query: 121 ----------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHN-----GNCIID 165
+PVEVV ++ A+R F+ G R + N IID
Sbjct: 121 SKMVDQLGAFKLPVEVV----QYGADRLYLDFESKGYKPSFRVTEQGDRFVTDMKNFIID 176
Query: 166 LYFKKDIGDME--VASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
L D+G + VA L+ + GVVEHG+F M VI+ GK GV I
Sbjct: 177 L----DLGKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKI 221
>sp|Q7NPM5|RPIA_GLOVI Ribose-5-phosphate isomerase A OS=Gloeobacter violaceus (strain PCC
7421) GN=rpiA PE=3 SV=1
Length = 230
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 104/226 (46%), Gaps = 49/226 (21%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
D LK+ AA ++VE V+ GMVVGLGT STA AV + E + G +VGIPTS+ T Q
Sbjct: 4 DILKQTAARRAVELVEDGMVVGLGTGSTAAFAVSVLAERVRLG--LRVVGIPTSERTARQ 61
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDPG-LA--------------------------- 121
A + GI L L +DL IDGADEV G LA
Sbjct: 62 AEAEGIVLGTLAEQSRVDLTIDGADEVALGELALIKGLGGALLREKIVAAASERLIIIVD 121
Query: 122 -------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHNGNCIIDLYF 168
+PVEV P W+ TA L + A+ + G+ I+D F
Sbjct: 122 ATKLVEQLGSHGPLPVEVAPFGWQATARALERLGAEVNLRAQHGQAFLTDGGHYILDCRF 181
Query: 169 K--KDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
++E A +R I GVVE G+F+ MA+ VI+ + G+ +
Sbjct: 182 GPIARPAELEAAIDR----IPGVVESGLFVGMASAVIVADEGGIEV 223
>sp|Q736S8|RPIA_BACC1 Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC
10987) GN=rpiA PE=3 SV=1
Length = 220
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 101/222 (45%), Gaps = 50/222 (22%)
Query: 32 LKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAV 91
LK++A + FVK GM +GLGT ST ++K+GE + +G + +PTSK T A
Sbjct: 3 LKQLAGEYAATFVKDGMKIGLGTGSTVYWTIEKLGERVKEGL--SFQAVPTSKETEVLAQ 60
Query: 92 SLGIPLSDLDSHPVIDLAIDGADEVDPGL------------------------------- 120
L IPL L+ +DL IDGADE+D L
Sbjct: 61 QLNIPLISLNDIQSLDLTIDGADEIDSNLHLIKGGGGALLREKIVASSSKELLIIADESK 120
Query: 121 --------AVPVEVVPVCWKFTANRFPDLFKDCGCVAKLR----TCYEKHNGNCIIDLYF 168
+PVE++P WK T ++ L GC LR + N N IID F
Sbjct: 121 LVTHLGTFPLPVEIIPFSWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCVF 176
Query: 169 KKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
+I + N L++I GVVE G+F++M + II K G+
Sbjct: 177 PHNITNPANLHNH-LKMITGVVETGLFVNMTSKAIIGTKNGI 217
>sp|Q8DTT9|RPIA_STRMU Ribose-5-phosphate isomerase A OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=rpiA PE=1 SV=1
Length = 225
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 62/232 (26%)
Query: 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQ 89
+ELKKIA ++ ++V+ GM+VGLGT STA + V+++G + + L+ ++G+ TS T Q
Sbjct: 2 EELKKIAGVRAAQYVEDGMIVGLGTGSTAYYFVEEVGRRVQEEGLQ-VIGVTTSSRTTAQ 60
Query: 90 AVSLGIPLSDLDSHPVIDLAIDGADEVDP------------------------------- 118
A +LGIPL +D +D+ +DGADEVDP
Sbjct: 61 AQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDE 120
Query: 119 --------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKHNG--------NC 162
+PVEVV ++ A R F+ G + + +++G N
Sbjct: 121 SKMVDTLGAFRLPVEVV----QYGAERLFREFEKKGY----KPSFREYDGVRFVTDMKNF 172
Query: 163 IIDLYFKKDIGDM--EVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTI 212
IIDL D+G + +A +L GVVEHG+F M VI+ GK GV I
Sbjct: 173 IIDL----DLGSIPDPIAFGNMLDHQVGVVEHGLFNGMVNRVIVAGKDGVRI 220
>sp|Q8Y8D3|RPIA_LISMO Ribose-5-phosphate isomerase A OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=rpiA PE=3 SV=1
Length = 224
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 44/211 (20%)
Query: 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92
KKIA K+ E++K GMVVGLGT ST + ++K+GE+++ G +I G+ TS+ T+ QA +
Sbjct: 5 KKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNG--LHITGVATSEETNKQAQN 62
Query: 93 LGIPLSDLDSHPVIDLAIDGADEVDPGLA------------------------------- 121
LGIPL L+ ID+ IDGADE+D
Sbjct: 63 LGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKL 122
Query: 122 --------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLR-TCYEKHNGNCIIDLYFKKDI 172
+P+EV+P WK + + Y +NGN I+D+ +
Sbjct: 123 VRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDI-VNQTF 181
Query: 173 GDMEVASNRILRLIAGVVEHGMFLDMATTVI 203
D E+ ++ + I G+VEHG+FL +I
Sbjct: 182 TDAEMWQEKLAQ-IPGIVEHGLFLHYVDIII 211
>sp|B3QCR0|RPIA_RHOPT Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris
(strain TIE-1) GN=rpiA PE=3 SV=1
Length = 232
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 110/230 (47%), Gaps = 50/230 (21%)
Query: 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT 86
+ ++ELK+ AA +++E V+ GM +GLGT STA H V+ +GE + G I+G+PTS+ T
Sbjct: 1 MDKEELKRRAAARALEEVRGGMKLGLGTGSTAKHFVELLGERVRLG--LEIIGVPTSEVT 58
Query: 87 HDQAVSLGIPLSDLDSHPVIDLAIDGADEVDPGL-------------------------- 120
A GI L+ LD +D+ IDGADEVD L
Sbjct: 59 RADAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVI 118
Query: 121 -------------AVPVEVVPVCWKFTANRFPDLFKDCGCVA--KLRTCYEKH-----NG 160
+P+EV+P T + F GC KLR + H G
Sbjct: 119 ADESKLVDTLGRFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGG 178
Query: 161 NCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
+ I+D + I D + +L +I GVVEHG+F+ MA+TV++ G G+
Sbjct: 179 HWILDAQLGR-IPDAPRLAQ-LLSVIPGVVEHGLFVGMASTVVLAGADGI 226
>sp|Q6N8C3|RPIA_RHOPA Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=rpiA PE=3 SV=1
Length = 232
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 110/230 (47%), Gaps = 50/230 (21%)
Query: 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT 86
+ ++ELK+ AA +++E V+ GM +GLGT STA H V+ +GE + G I+G+PTS+ T
Sbjct: 1 MDKEELKRRAAARALEEVRGGMKLGLGTGSTAKHFVELLGERVRLG--LEIIGVPTSEVT 58
Query: 87 HDQAVSLGIPLSDLDSHPVIDLAIDGADEVDPGL-------------------------- 120
A GI L+ LD +D+ IDGADEVD L
Sbjct: 59 RADAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVI 118
Query: 121 -------------AVPVEVVPVCWKFTANRFPDLFKDCGCVA--KLRTCYEKH-----NG 160
+P+EV+P T + F GC KLR + H G
Sbjct: 119 ADESKLVDTLGRFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGG 178
Query: 161 NCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGV 210
+ I+D + I D + +L +I GVVEHG+F+ MA+TV++ G G+
Sbjct: 179 HWILDAQLGR-IPDAPRLAQ-LLSVIPGVVEHGLFVGMASTVVLAGADGI 226
>sp|Q3AHX1|RPIA_SYNSC Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain CC9605)
GN=rpiA PE=3 SV=1
Length = 239
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K+ A+ +VE +K GMV+GLG+ STA + +G L G+LK+IVG+ TS
Sbjct: 5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIQGLGAKLASGELKDIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA--------------------------- 121
A L IPL L++ IDLAIDGADEVDPG
Sbjct: 65 LAAELNIPLLSLNAVSRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVD 124
Query: 122 -------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
+PVEV+P W+ + L G A+LR K GN
Sbjct: 125 STKLVDRLNLGFLLPVEVLPGAWRQVKQQLEAL----GGSAELRMAQRKAGPVVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D I D VA + + I GV+E+G+F+++ V++
Sbjct: 181 VLDAKLDGGISD-PVALEQTINNIPGVLENGLFVNITDEVLV 221
>sp|Q7U8K8|RPIA_SYNPX Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain WH8102)
GN=rpiA PE=3 SV=1
Length = 239
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 102/222 (45%), Gaps = 51/222 (22%)
Query: 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHD 88
Q ++K+ A+ +VE +K GMV+GLG+ STA + +G L G+LK+IVG+ TS
Sbjct: 5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIKALGAKLASGELKDIVGVTTSFQGEV 64
Query: 89 QAVSLGIPLSDLDSHPVIDLAIDGADEVDPGLA--------------------------- 121
A L IPL L++ IDLAIDGADEVDPG
Sbjct: 65 LAAELNIPLLSLNAVDRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVD 124
Query: 122 -------------VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEK------HNGNC 162
+PVEV+P W+ + L G A+LR K GN
Sbjct: 125 STKLVERLNLGFLLPVEVLPGAWRQVQQQLAAL----GGKAELRMAQRKAGPVVTDQGNL 180
Query: 163 IIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVII 204
++D+ I D A + I GV+E+G+F+D+ V++
Sbjct: 181 VLDVTMNGGISD-PAALESTVNNIPGVLENGLFVDLVDEVLV 221
>sp|Q07Q53|RPIA_RHOP5 Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris
(strain BisA53) GN=rpiA PE=3 SV=1
Length = 241
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 50/235 (21%)
Query: 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT 86
++ DELK+ AA ++E V+ GM +GLGT STA H V+ +G + QG L+ +VG+PTS+ T
Sbjct: 1 MSSDELKRQAAAVALEQVRDGMKLGLGTGSTAKHFVELLGAKV-QGGLQ-VVGVPTSEVT 58
Query: 87 HDQAVSLGIPLSDLDSHPVIDLAIDGADEVDPGL-------------------------- 120
A GIPL+ LD +DL +DGADE+DP L
Sbjct: 59 RADAERCGIPLATLDEVDHLDLTVDGADEIDPALNLVKGGGGALLREKIVAAASGRMIVI 118
Query: 121 -------------AVPVEVVPVCWKFTANRFPDLFKDCGCVA--KLRTCYEKH-----NG 160
+P+EV+P T CG KLR + H G
Sbjct: 119 ADDSKLVETLGRFPLPIEVIPFGLAATRRAIEQALAVCGIDGELKLRNGKDGHAFVTDGG 178
Query: 161 NCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215
+ I+D + + +A +L +I G+VEHG+F+ +A++V++ G+ I +
Sbjct: 179 HWIVDAHLGRIPDAPRLAG--LLSVIPGIVEHGLFIGLASSVVLASPHGIRIIER 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,319,220
Number of Sequences: 539616
Number of extensions: 3413161
Number of successful extensions: 10231
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 8940
Number of HSP's gapped (non-prelim): 825
length of query: 215
length of database: 191,569,459
effective HSP length: 113
effective length of query: 102
effective length of database: 130,592,851
effective search space: 13320470802
effective search space used: 13320470802
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)