Query 036939
Match_columns 215
No_of_seqs 163 out of 1067
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 11:22:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036939.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036939hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gmk_A Ribose-5-phosphate isom 100.0 2.5E-63 8.4E-68 429.7 20.9 182 27-215 2-227 (228)
2 3ixq_A Ribose-5-phosphate isom 100.0 1.5E-60 5.2E-65 411.9 21.1 179 27-215 1-226 (226)
3 3l7o_A Ribose-5-phosphate isom 100.0 9.1E-60 3.1E-64 407.1 19.1 179 30-215 2-223 (225)
4 3hhe_A Ribose-5-phosphate isom 100.0 4.6E-59 1.6E-63 408.8 22.6 195 16-215 12-252 (255)
5 3uw1_A Ribose-5-phosphate isom 100.0 6E-59 2E-63 405.0 19.2 179 25-214 7-235 (239)
6 2pjm_A Ribose-5-phosphate isom 100.0 1.7E-57 5.9E-62 393.1 20.7 179 27-215 1-226 (226)
7 3kwm_A Ribose-5-phosphate isom 100.0 7.5E-57 2.6E-61 388.7 18.5 177 26-213 6-223 (224)
8 1lk5_A D-ribose-5-phosphate is 100.0 1.2E-55 4E-60 382.0 22.6 183 27-215 1-229 (229)
9 2f8m_A Ribose 5-phosphate isom 100.0 1.3E-55 4.3E-60 385.2 21.9 185 29-214 9-240 (244)
10 1uj6_A Ribose 5-phosphate isom 100.0 5.8E-54 2E-58 370.9 22.0 180 26-212 2-225 (227)
11 1xtz_A Ribose-5-phosphate isom 100.0 1.3E-53 4.4E-58 376.3 20.0 184 23-212 12-254 (264)
12 1m0s_A Ribose-5-phosphate isom 100.0 9.5E-53 3.2E-57 361.8 20.3 176 27-213 1-218 (219)
13 1o8b_A Ribose 5-phosphate isom 100.0 3E-53 1E-57 365.0 11.0 178 27-215 1-219 (219)
14 1vb5_A Translation initiation 98.0 3.3E-05 1.1E-09 67.7 9.6 99 30-133 93-223 (276)
15 2w48_A Sorbitol operon regulat 97.6 5.1E-05 1.7E-09 66.8 5.6 83 31-116 90-215 (315)
16 2o0m_A Transcriptional regulat 97.2 0.00019 6.3E-09 64.1 3.4 86 30-117 121-247 (345)
17 3efb_A Probable SOR-operon reg 96.6 0.0012 4.2E-08 57.0 3.9 46 22-67 32-81 (266)
18 3kv1_A Transcriptional repress 96.3 0.0026 8.7E-08 55.1 3.9 50 28-81 33-86 (267)
19 3nze_A Putative transcriptiona 96.3 0.0067 2.3E-07 52.4 6.5 50 28-81 34-87 (267)
20 2okg_A Central glycolytic gene 96.2 0.0021 7.1E-08 55.2 2.8 47 32-81 38-88 (255)
21 2gnp_A Transcriptional regulat 96.2 0.0048 1.6E-07 53.2 4.9 46 32-81 39-88 (266)
22 3qli_A Coenzyme A transferase; 95.3 0.014 4.9E-07 54.6 4.8 64 18-81 7-74 (455)
23 2r5f_A Transcriptional regulat 95.1 0.017 5.7E-07 49.7 4.3 48 31-81 38-91 (264)
24 3ecs_A Translation initiation 94.9 0.077 2.6E-06 47.4 8.0 82 32-118 107-202 (315)
25 1k6d_A Acetate COA-transferase 94.3 0.055 1.9E-06 45.4 5.3 45 36-84 7-54 (220)
26 3cdk_A Succinyl-COA:3-ketoacid 94.0 0.061 2.1E-06 45.9 5.1 44 36-83 10-56 (241)
27 3d3u_A 4-hydroxybutyrate COA-t 93.5 0.062 2.1E-06 49.6 4.5 38 30-67 193-230 (439)
28 3a11_A Translation initiation 93.5 0.67 2.3E-05 41.5 11.1 84 32-118 127-222 (338)
29 1t5o_A EIF2BD, translation ini 93.3 0.18 6.1E-06 45.6 7.0 97 32-132 132-269 (351)
30 3rrl_A Succinyl-COA:3-ketoacid 92.9 0.1 3.5E-06 44.6 4.7 44 36-83 10-56 (235)
31 2ahu_A Putative enzyme YDIF; C 92.8 0.048 1.6E-06 51.8 2.7 62 20-84 4-70 (531)
32 2yvk_A Methylthioribose-1-phos 92.6 0.24 8.1E-06 45.2 6.9 84 31-118 158-265 (374)
33 1xr4_A Putative citrate lyase 92.1 0.12 3.9E-06 48.9 4.3 49 36-84 48-99 (509)
34 3d3u_A 4-hydroxybutyrate COA-t 91.6 0.1 3.5E-06 48.1 3.3 48 33-82 10-59 (439)
35 1poi_A Glutaconate coenzyme A- 91.4 0.18 6.3E-06 44.6 4.6 43 37-83 6-52 (317)
36 2a0u_A Initiation factor 2B; S 91.3 0.5 1.7E-05 43.2 7.5 81 32-118 155-269 (383)
37 1fs5_A Glucosamine-6-phosphate 90.1 0.4 1.4E-05 40.6 5.4 52 29-80 9-69 (266)
38 2bkx_A Glucosamine-6-phosphate 90.0 0.4 1.4E-05 39.8 5.2 40 29-68 9-50 (242)
39 1t9k_A Probable methylthioribo 89.1 0.83 2.8E-05 41.1 6.9 83 31-118 133-240 (347)
40 1ne7_A Glucosamine-6-phosphate 88.5 0.75 2.6E-05 39.7 6.0 52 29-80 9-69 (289)
41 2oas_A ATOA, 4-hydroxybutyrate 87.6 0.65 2.2E-05 42.8 5.3 46 36-83 8-54 (436)
42 2ri0_A Glucosamine-6-phosphate 87.4 0.82 2.8E-05 37.7 5.4 39 29-67 10-49 (234)
43 2hj0_A Putative citrate lyase, 86.5 0.86 2.9E-05 43.1 5.6 48 33-84 47-102 (519)
44 2jsx_A Protein NAPD; TAT, proo 85.4 2 6.8E-05 31.6 6.0 70 122-200 10-80 (95)
45 2cvi_A 75AA long hypothetical 85.0 1 3.5E-05 31.3 4.1 60 124-192 8-69 (83)
46 2zbc_A 83AA long hypothetical 83.2 1.6 5.6E-05 29.7 4.5 61 124-193 8-70 (83)
47 2nvv_A Acetyl-COA hydrolase/tr 83.1 0.55 1.9E-05 44.2 2.6 117 36-166 7-140 (506)
48 1xr4_A Putative citrate lyase 83.1 4.5 0.00015 38.0 8.8 89 30-118 247-375 (509)
49 2g39_A Acetyl-COA hydrolase; c 82.9 1.1 3.6E-05 42.2 4.4 120 33-166 14-145 (497)
50 3gk7_A 4-hydroxybutyrate COA-t 81.4 1.8 6.2E-05 40.2 5.3 48 33-82 10-58 (448)
51 3k6m_A Succinyl-COA:3-ketoacid 80.7 2 6.7E-05 40.3 5.3 43 37-83 7-52 (481)
52 4eu9_A Succinyl-COA:acetate co 80.6 1.5 5.2E-05 41.1 4.5 49 33-81 13-68 (514)
53 3eh7_A 4-hydroxybutyrate COA-t 80.6 1.4 4.7E-05 40.7 4.2 48 33-82 14-62 (434)
54 2hj0_A Putative citrate lyase, 77.8 3.4 0.00012 39.0 6.0 39 30-68 250-294 (519)
55 1y89_A DEVB protein; structura 76.4 2.9 9.9E-05 34.9 4.6 41 28-68 9-51 (238)
56 1poi_B Glutaconate coenzyme A- 76.2 3.3 0.00011 35.6 5.0 35 32-67 7-41 (260)
57 4df3_A Fibrillarin-like rRNA/T 74.3 3.6 0.00012 34.7 4.7 54 33-92 61-120 (233)
58 3rrl_B Succinyl-COA:3-ketoacid 74.1 2.3 7.7E-05 35.5 3.3 23 33-55 2-24 (207)
59 3css_A 6-phosphogluconolactona 73.9 3.7 0.00013 35.0 4.7 41 28-68 13-59 (267)
60 2djw_A Probable transcriptiona 72.2 3.2 0.00011 29.2 3.3 61 124-193 8-70 (92)
61 3tqh_A Quinone oxidoreductase; 70.3 21 0.00073 30.1 8.8 73 36-114 140-224 (321)
62 4gek_A TRNA (CMO5U34)-methyltr 67.8 5.2 0.00018 33.6 4.3 59 29-92 53-114 (261)
63 2cyy_A Putative HTH-type trans 64.3 7.3 0.00025 29.6 4.2 64 123-195 72-136 (151)
64 3j20_B 30S ribosomal protein S 63.4 63 0.0022 26.7 10.8 84 31-114 49-158 (202)
65 3qli_A Coenzyme A transferase; 62.1 7.9 0.00027 36.0 4.7 39 29-67 217-255 (455)
66 3c85_A Putative glutathione-re 61.6 11 0.00037 29.1 4.8 50 46-99 39-88 (183)
67 3hn6_A Glucosamine-6-phosphate 61.6 9.9 0.00034 32.9 5.0 57 18-74 14-82 (289)
68 2oas_A ATOA, 4-hydroxybutyrate 61.1 5.3 0.00018 36.7 3.3 38 30-67 187-224 (436)
69 3zzm_A Bifunctional purine bio 60.4 19 0.00065 34.2 6.9 66 33-98 413-490 (523)
70 1vl1_A 6PGL, 6-phosphogluconol 60.1 4.9 0.00017 33.6 2.7 22 46-67 45-66 (232)
71 1vi6_A 30S ribosomal protein S 59.9 74 0.0025 26.4 11.1 85 30-114 52-162 (208)
72 2nzc_A Hypothetical protein; s 59.5 2.6 9E-05 30.8 0.7 58 133-192 19-78 (86)
73 3gk7_A 4-hydroxybutyrate COA-t 59.2 7.2 0.00025 36.2 3.8 39 29-67 191-229 (448)
74 1kol_A Formaldehyde dehydrogen 58.9 53 0.0018 28.5 9.3 74 37-114 174-263 (398)
75 4es6_A Uroporphyrinogen-III sy 58.8 12 0.00041 30.8 4.8 51 47-99 186-236 (254)
76 2ia0_A Putative HTH-type trans 58.6 16 0.00055 28.7 5.4 61 124-193 82-151 (171)
77 2e1c_A Putative HTH-type trans 57.1 9.6 0.00033 30.1 3.8 64 122-194 91-155 (171)
78 3fwz_A Inner membrane protein 55.4 36 0.0012 25.1 6.6 49 47-100 8-56 (140)
79 2dbb_A Putative HTH-type trans 54.4 9.7 0.00033 28.8 3.3 62 124-194 75-139 (151)
80 3ix7_A Uncharacterized protein 53.7 23 0.00077 27.5 5.3 67 30-102 51-124 (134)
81 4ehi_A Bifunctional purine bio 52.6 30 0.001 33.0 6.8 66 33-98 421-501 (534)
82 3eh7_A 4-hydroxybutyrate COA-t 51.4 12 0.00039 34.5 3.8 38 29-66 195-232 (434)
83 1i1g_A Transcriptional regulat 51.3 11 0.00038 27.9 3.2 61 124-193 70-132 (141)
84 1vp8_A Hypothetical protein AF 51.0 39 0.0013 28.2 6.6 90 30-132 29-133 (201)
85 3mw8_A Uroporphyrinogen-III sy 50.9 14 0.00046 30.1 3.8 52 47-99 173-224 (240)
86 2dph_A Formaldehyde dismutase; 50.8 82 0.0028 27.4 9.2 74 37-114 174-263 (398)
87 3s5o_A 4-hydroxy-2-oxoglutarat 50.4 27 0.00093 30.1 5.9 69 30-98 66-146 (307)
88 1jr2_A Uroporphyrinogen-III sy 49.8 29 0.00099 29.0 5.9 52 46-98 210-261 (286)
89 4ej6_A Putative zinc-binding d 48.7 93 0.0032 26.8 9.2 75 36-114 170-262 (370)
90 3i8o_A KH domain-containing pr 48.2 27 0.00093 27.4 5.0 49 56-110 92-141 (142)
91 3oj0_A Glutr, glutamyl-tRNA re 48.2 14 0.00049 27.4 3.3 51 46-101 20-72 (144)
92 3p9z_A Uroporphyrinogen III co 48.0 27 0.00093 28.4 5.3 47 46-98 161-207 (229)
93 2cg4_A Regulatory protein ASNC 46.2 23 0.00078 26.7 4.3 63 124-195 74-139 (152)
94 3u5c_A 40S ribosomal protein S 45.9 1.4E+02 0.0049 25.5 10.3 84 31-114 54-164 (252)
95 3upu_A ATP-dependent DNA helic 45.4 57 0.002 29.2 7.4 59 36-96 33-97 (459)
96 3fkr_A L-2-keto-3-deoxyarabona 44.8 41 0.0014 29.0 6.2 53 30-84 60-114 (309)
97 2vc6_A MOSA, dihydrodipicolina 44.3 42 0.0014 28.6 6.1 67 30-98 52-130 (292)
98 2p5v_A Transcriptional regulat 43.6 26 0.0009 26.7 4.3 61 124-193 76-140 (162)
99 3av3_A Phosphoribosylglycinami 42.7 25 0.00086 28.8 4.2 48 49-100 8-59 (212)
100 3m5v_A DHDPS, dihydrodipicolin 42.7 31 0.0011 29.6 5.0 69 30-98 59-138 (301)
101 1y0b_A Xanthine phosphoribosyl 42.6 9 0.00031 30.5 1.4 52 51-106 129-184 (197)
102 2xzm_B RPS0E; ribosome, transl 42.3 1.6E+02 0.0054 25.0 10.1 83 32-114 51-161 (241)
103 3flu_A DHDPS, dihydrodipicolin 42.1 26 0.0009 30.0 4.5 69 30-98 59-137 (297)
104 2ehh_A DHDPS, dihydrodipicolin 41.8 32 0.0011 29.4 5.0 68 30-98 52-130 (294)
105 2zkq_b 40S ribosomal protein S 41.2 1.8E+02 0.0062 25.4 10.0 83 32-114 56-165 (295)
106 3iz6_A 40S ribosomal protein S 40.4 1.9E+02 0.0066 25.5 10.6 83 32-114 60-169 (305)
107 3p9x_A Phosphoribosylglycinami 40.4 33 0.0011 28.4 4.6 47 50-100 8-58 (211)
108 3ip1_A Alcohol dehydrogenase, 40.3 1.5E+02 0.005 25.8 9.2 57 36-96 199-260 (404)
109 3phh_A Shikimate dehydrogenase 40.2 34 0.0012 29.2 4.9 60 47-111 119-178 (269)
110 3jyn_A Quinone oxidoreductase; 40.0 1.2E+02 0.0041 25.4 8.3 68 43-115 137-219 (325)
111 3l21_A DHDPS, dihydrodipicolin 39.8 28 0.00096 30.0 4.3 52 30-83 67-120 (304)
112 3re1_A Uroporphyrinogen-III sy 39.4 17 0.00057 30.4 2.7 51 47-99 194-244 (269)
113 1stz_A Heat-inducible transcri 39.2 4.8 0.00016 35.7 -0.8 42 31-85 100-141 (338)
114 1kpg_A CFA synthase;, cyclopro 39.1 86 0.003 25.3 7.1 58 27-92 43-105 (287)
115 3fpc_A NADP-dependent alcohol 39.1 1.2E+02 0.004 25.8 8.1 76 36-115 154-245 (352)
116 3cpr_A Dihydrodipicolinate syn 39.0 38 0.0013 29.2 5.0 68 30-98 68-146 (304)
117 3hem_A Cyclopropane-fatty-acyl 38.9 86 0.003 25.7 7.1 58 27-92 51-113 (302)
118 2yxg_A DHDPS, dihydrodipicolin 38.7 31 0.0011 29.4 4.3 54 30-84 52-106 (289)
119 3qze_A DHDPS, dihydrodipicolin 38.4 32 0.0011 29.8 4.5 68 30-98 75-153 (314)
120 3k6m_A Succinyl-COA:3-ketoacid 38.0 20 0.00067 33.5 3.1 26 30-55 260-285 (481)
121 2wkj_A N-acetylneuraminate lya 37.9 32 0.0011 29.6 4.4 54 30-84 63-117 (303)
122 1xky_A Dihydrodipicolinate syn 37.6 33 0.0011 29.5 4.4 53 30-84 64-118 (301)
123 3si9_A DHDPS, dihydrodipicolin 37.6 28 0.00097 30.3 4.0 69 30-98 74-152 (315)
124 1w3i_A EDA, 2-keto-3-deoxy glu 37.4 47 0.0016 28.3 5.3 66 30-98 51-127 (293)
125 3a5f_A Dihydrodipicolinate syn 37.4 35 0.0012 29.1 4.5 53 30-84 53-107 (291)
126 4dup_A Quinone oxidoreductase; 37.3 1.9E+02 0.0065 24.5 9.3 74 36-114 154-244 (353)
127 1f6k_A N-acetylneuraminate lya 37.1 33 0.0011 29.3 4.3 54 30-84 56-110 (293)
128 1gpj_A Glutamyl-tRNA reductase 37.1 55 0.0019 29.1 5.9 64 46-113 166-235 (404)
129 2r91_A 2-keto-3-deoxy-(6-phosp 37.0 39 0.0013 28.7 4.7 66 30-98 50-126 (286)
130 2pn6_A ST1022, 150AA long hypo 36.8 30 0.001 25.9 3.5 57 128-193 75-133 (150)
131 2ojp_A DHDPS, dihydrodipicolin 36.7 33 0.0011 29.3 4.2 53 30-84 53-107 (292)
132 2ahu_A Putative enzyme YDIF; C 36.1 24 0.00082 33.1 3.5 34 33-67 288-321 (531)
133 2nuw_A 2-keto-3-deoxygluconate 36.1 42 0.0014 28.6 4.7 52 30-84 51-102 (288)
134 3tak_A DHDPS, dihydrodipicolin 35.9 29 0.001 29.6 3.7 68 30-98 53-131 (291)
135 4dpp_A DHDPS 2, dihydrodipicol 35.9 44 0.0015 29.9 5.1 54 30-83 111-164 (360)
136 3s2e_A Zinc-containing alcohol 35.5 2E+02 0.0067 24.1 9.7 72 37-113 155-240 (340)
137 3daq_A DHDPS, dihydrodipicolin 35.4 29 0.001 29.6 3.7 52 30-83 54-107 (292)
138 3iup_A Putative NADPH:quinone 35.2 93 0.0032 26.9 7.0 51 45-100 169-223 (379)
139 1ucr_A Protein DSVD; dissimila 34.7 3.3 0.00011 29.8 -2.1 31 33-63 35-66 (78)
140 4es6_A Uroporphyrinogen-III sy 34.5 84 0.0029 25.5 6.3 58 40-99 52-109 (254)
141 3dfz_A SIRC, precorrin-2 dehyd 34.5 1E+02 0.0034 25.5 6.7 49 45-98 30-80 (223)
142 3qfe_A Putative dihydrodipicol 34.4 28 0.00097 30.3 3.4 54 30-83 63-116 (318)
143 3jv7_A ADH-A; dehydrogenase, n 34.4 1.9E+02 0.0067 24.2 8.8 57 37-97 158-219 (345)
144 3uog_A Alcohol dehydrogenase; 34.2 2.1E+02 0.0071 24.4 9.0 74 36-114 176-266 (363)
145 3b4u_A Dihydrodipicolinate syn 34.1 35 0.0012 29.2 3.9 53 30-84 55-109 (294)
146 3llv_A Exopolyphosphatase-rela 33.7 1.3E+02 0.0045 21.5 6.7 48 48-100 8-55 (141)
147 1t57_A Conserved protein MTH16 33.7 54 0.0018 27.5 4.8 63 30-100 37-111 (206)
148 3re1_A Uroporphyrinogen-III sy 33.5 81 0.0028 26.0 6.1 57 40-98 60-116 (269)
149 1h2b_A Alcohol dehydrogenase; 33.5 2.2E+02 0.0076 24.1 9.3 74 37-114 173-263 (359)
150 1g8m_A Aicar transformylase-IM 33.3 28 0.00095 33.6 3.4 34 33-66 418-459 (593)
151 3na8_A Putative dihydrodipicol 32.9 34 0.0012 29.7 3.7 52 30-83 76-129 (315)
152 3ico_A 6PGL, 6-phosphogluconol 32.8 67 0.0023 27.2 5.5 41 28-68 31-77 (268)
153 1o5k_A DHDPS, dihydrodipicolin 32.8 34 0.0012 29.5 3.7 53 30-84 64-118 (306)
154 3bch_A 40S ribosomal protein S 32.6 2.3E+02 0.008 24.1 11.3 83 32-114 89-198 (253)
155 3dz1_A Dihydrodipicolinate syn 32.6 51 0.0017 28.5 4.8 53 30-83 60-112 (313)
156 2w25_A Probable transcriptiona 32.4 14 0.00048 27.9 1.0 58 126-192 76-134 (150)
157 1o2d_A Alcohol dehydrogenase, 32.3 59 0.002 28.5 5.2 40 45-86 98-152 (371)
158 3two_A Mannitol dehydrogenase; 32.2 1.4E+02 0.0049 25.2 7.6 73 38-115 166-244 (348)
159 1aj0_A DHPS, dihydropteroate s 32.2 82 0.0028 27.1 6.0 62 34-99 38-115 (282)
160 2r8w_A AGR_C_1641P; APC7498, d 31.6 39 0.0013 29.6 3.9 53 30-84 86-140 (332)
161 4ggi_A UDP-2,3-diacylglucosami 31.3 69 0.0024 27.3 5.3 57 43-99 175-249 (283)
162 3gms_A Putative NADPH:quinone 30.9 1.8E+02 0.0063 24.4 8.0 69 43-115 141-223 (340)
163 3nx4_A Putative oxidoreductase 30.1 1E+02 0.0035 25.6 6.2 45 47-96 148-193 (324)
164 1zcz_A Bifunctional purine bio 30.1 40 0.0014 31.5 3.8 66 33-98 354-431 (464)
165 2v9d_A YAGE; dihydrodipicolini 30.1 40 0.0014 29.7 3.7 53 30-84 83-137 (343)
166 2ywr_A Phosphoribosylglycinami 29.9 79 0.0027 25.8 5.3 48 49-100 4-57 (216)
167 2rfg_A Dihydrodipicolinate syn 29.4 35 0.0012 29.3 3.1 67 30-98 52-130 (297)
168 3iht_A S-adenosyl-L-methionine 29.3 63 0.0021 26.3 4.4 23 45-67 40-64 (174)
169 2yci_X 5-methyltetrahydrofolat 29.2 1.2E+02 0.0042 25.7 6.6 62 34-99 34-105 (271)
170 4eez_A Alcohol dehydrogenase 1 29.1 2.5E+02 0.0086 23.4 10.6 56 37-96 152-210 (348)
171 3h5d_A DHDPS, dihydrodipicolin 29.0 68 0.0023 27.7 5.0 53 30-83 59-113 (311)
172 3tx2_A Probable 6-phosphogluco 28.9 74 0.0025 26.6 5.1 41 28-68 15-61 (251)
173 2wns_A Orotate phosphoribosylt 28.9 44 0.0015 26.9 3.5 51 51-102 120-170 (205)
174 3d0c_A Dihydrodipicolinate syn 28.8 63 0.0022 27.9 4.7 69 30-101 64-144 (314)
175 1eye_A DHPS 1, dihydropteroate 28.7 2.2E+02 0.0075 24.3 8.1 63 35-99 30-105 (280)
176 1e3j_A NADP(H)-dependent ketos 28.5 2.6E+02 0.009 23.5 9.4 55 37-96 157-214 (352)
177 3eb2_A Putative dihydrodipicol 28.5 31 0.0011 29.7 2.6 67 30-98 56-134 (300)
178 2p1z_A Phosphoribosyltransfera 28.2 31 0.0011 27.1 2.5 50 51-104 123-175 (180)
179 4ds3_A Phosphoribosylglycinami 28.1 78 0.0027 26.0 4.9 49 49-101 12-64 (209)
180 3by5_A Cobalamin biosynthesis 28.1 45 0.0015 26.4 3.3 52 49-101 12-71 (155)
181 2yzk_A OPRT, oprtase, orotate 28.0 31 0.001 27.1 2.3 50 51-101 115-164 (178)
182 3lhi_A Putative 6-phosphogluco 27.9 55 0.0019 27.0 4.0 40 28-67 10-55 (232)
183 2w6k_A COBE; biosynthetic prot 27.7 75 0.0026 24.7 4.5 54 48-101 12-75 (145)
184 2pw9_A Putative formate dehydr 27.6 1.2E+02 0.0042 25.9 6.3 76 29-109 176-252 (268)
185 1piw_A Hypothetical zinc-type 27.5 1.6E+02 0.0054 25.0 7.1 73 37-114 168-252 (360)
186 3mw8_A Uroporphyrinogen-III sy 27.3 85 0.0029 25.2 5.0 50 44-98 48-97 (240)
187 1b93_A Protein (methylglyoxal 27.3 1.8E+02 0.0063 22.8 6.8 34 29-63 19-54 (152)
188 3bus_A REBM, methyltransferase 27.1 1.2E+02 0.0041 24.1 5.9 57 28-92 41-102 (273)
189 1pl8_A Human sorbitol dehydrog 27.1 2.8E+02 0.0097 23.4 9.4 56 37-96 160-218 (356)
190 2cfx_A HTH-type transcriptiona 27.1 94 0.0032 23.0 4.9 55 123-189 70-125 (144)
191 1jkx_A GART;, phosphoribosylgl 26.8 50 0.0017 27.1 3.5 49 49-101 5-57 (212)
192 3nwp_A 6-phosphogluconolactona 26.7 62 0.0021 26.8 4.1 40 28-67 13-58 (233)
193 4a2c_A Galactitol-1-phosphate 26.5 2.3E+02 0.0078 23.6 7.8 50 43-96 157-207 (346)
194 3oc6_A 6-phosphogluconolactona 26.5 83 0.0028 26.2 4.9 41 28-68 15-61 (248)
195 2aee_A OPRT, oprtase, orotate 26.2 33 0.0011 27.6 2.3 48 52-103 127-178 (211)
196 3lwd_A 6-phosphogluconolactona 25.9 52 0.0018 27.1 3.5 21 47-67 34-54 (226)
197 3fbg_A Putative arginate lyase 25.8 3E+02 0.01 23.1 9.5 64 46-114 150-226 (346)
198 3e15_A Glucose-6-phosphate 1-d 25.5 84 0.0029 27.5 4.9 41 27-67 33-81 (312)
199 3l9w_A Glutathione-regulated p 25.5 1.4E+02 0.0048 26.7 6.6 48 47-99 5-52 (413)
200 1vmd_A MGS, methylglyoxal synt 25.1 1.8E+02 0.0062 23.6 6.5 34 29-63 35-70 (178)
201 3krt_A Crotonyl COA reductase; 25.0 3.6E+02 0.012 23.8 9.2 50 43-96 225-275 (456)
202 1yqg_A Pyrroline-5-carboxylate 25.0 1.7E+02 0.006 23.3 6.6 44 51-98 5-49 (263)
203 1tx2_A DHPS, dihydropteroate s 24.6 1.6E+02 0.0056 25.4 6.6 62 33-98 62-139 (297)
204 3auf_A Glycinamide ribonucleot 24.6 86 0.0029 26.0 4.6 44 53-100 31-78 (229)
205 3gaz_A Alcohol dehydrogenase s 24.4 3.1E+02 0.011 23.0 8.4 72 36-114 137-225 (343)
206 2vp8_A Dihydropteroate synthas 24.4 1.6E+02 0.0054 25.9 6.5 62 34-98 65-141 (318)
207 1fmt_A Methionyl-tRNA FMet for 24.4 1.2E+02 0.004 26.3 5.6 49 49-102 6-67 (314)
208 2aot_A HMT, histamine N-methyl 24.2 74 0.0025 26.2 4.2 41 50-92 59-100 (292)
209 3d1l_A Putative NADP oxidoredu 24.1 1.5E+02 0.005 23.9 6.0 46 47-97 10-58 (266)
210 3tqq_A Methionyl-tRNA formyltr 24.0 1.3E+02 0.0044 26.1 5.8 49 49-102 5-66 (314)
211 3kcq_A Phosphoribosylglycinami 24.0 77 0.0026 26.2 4.2 48 49-100 13-64 (215)
212 2bln_A Protein YFBG; transfera 23.7 1.2E+02 0.0042 26.0 5.6 49 49-102 3-61 (305)
213 2nvv_A Acetyl-COA hydrolase/tr 23.6 57 0.002 30.4 3.6 40 29-68 224-273 (506)
214 3eb9_A 6-phosphogluconolactona 23.5 1.2E+02 0.0042 25.4 5.5 40 28-67 12-57 (266)
215 3q0i_A Methionyl-tRNA formyltr 23.5 1.6E+02 0.0056 25.5 6.4 49 48-101 9-70 (318)
216 1uuf_A YAHK, zinc-type alcohol 23.3 1.8E+02 0.0063 24.9 6.7 72 38-114 184-266 (369)
217 3d8t_A Uroporphyrinogen-III sy 23.0 32 0.0011 28.8 1.6 52 47-98 209-262 (286)
218 3bbn_B Ribosomal protein S2; s 23.0 3.3E+02 0.011 22.7 9.2 40 74-113 157-203 (231)
219 2o57_A Putative sarcosine dime 22.7 1.5E+02 0.0052 23.9 5.8 55 30-92 60-123 (297)
220 1f8f_A Benzyl alcohol dehydrog 22.7 3.5E+02 0.012 22.9 9.4 75 36-114 177-267 (371)
221 3e23_A Uncharacterized protein 22.6 1.7E+02 0.0059 22.2 5.8 52 38-98 35-90 (211)
222 3eey_A Putative rRNA methylase 22.2 84 0.0029 23.8 3.9 45 42-92 18-65 (197)
223 3rfo_A Methionyl-tRNA formyltr 22.0 1.7E+02 0.0057 25.4 6.2 53 46-103 2-69 (317)
224 1rjw_A ADH-HT, alcohol dehydro 21.9 3.5E+02 0.012 22.6 9.7 67 43-114 161-239 (339)
225 3mvn_A UDP-N-acetylmuramate:L- 21.9 71 0.0024 24.5 3.4 35 33-68 125-160 (163)
226 3da8_A Probable 5'-phosphoribo 21.7 63 0.0021 26.7 3.2 47 49-100 15-66 (215)
227 1wcw_A Uroporphyrinogen III sy 21.7 28 0.00095 28.4 1.0 52 47-98 184-237 (261)
228 3gqv_A Enoyl reductase; medium 21.6 2.8E+02 0.0097 23.6 7.6 65 45-114 163-240 (371)
229 2f1k_A Prephenate dehydrogenas 21.6 1.4E+02 0.0049 24.1 5.4 42 50-96 4-45 (279)
230 4eu9_A Succinyl-COA:acetate co 21.5 1E+02 0.0035 28.6 4.9 25 43-67 259-283 (514)
231 3pi7_A NADH oxidoreductase; gr 21.4 2.5E+02 0.0087 23.5 7.2 65 45-114 162-242 (349)
232 3ce6_A Adenosylhomocysteinase; 21.4 1.4E+02 0.0048 27.7 5.8 66 43-113 270-337 (494)
233 3tr9_A Dihydropteroate synthas 21.4 1.5E+02 0.0052 26.0 5.8 61 34-98 49-129 (314)
234 2vns_A Metalloreductase steap3 21.0 81 0.0028 25.1 3.7 45 49-98 31-75 (215)
235 3c24_A Putative oxidoreductase 21.0 1.3E+02 0.0046 24.6 5.2 44 49-97 14-58 (286)
236 1iz0_A Quinone oxidoreductase; 20.8 2E+02 0.007 23.5 6.3 66 44-115 123-198 (302)
237 2g39_A Acetyl-COA hydrolase; c 20.7 58 0.002 30.3 3.0 39 29-67 229-277 (497)
238 2vn8_A Reticulon-4-interacting 20.7 3.9E+02 0.013 22.7 8.6 74 36-115 166-258 (375)
239 2fk8_A Methoxy mycolic acid sy 20.7 2.5E+02 0.0085 23.0 6.8 58 28-93 70-132 (318)
240 1jzt_A Hypothetical 27.5 kDa p 20.6 3.6E+02 0.012 22.3 9.4 65 49-118 62-145 (246)
241 4b7c_A Probable oxidoreductase 20.5 3.7E+02 0.013 22.3 9.6 76 35-114 135-227 (336)
242 2yvq_A Carbamoyl-phosphate syn 20.4 2.8E+02 0.0095 20.9 7.2 22 76-98 50-71 (143)
243 2hmt_A YUAA protein; RCK, KTN, 20.1 2.1E+02 0.0073 19.9 5.5 46 48-98 8-53 (144)
244 3iv7_A Alcohol dehydrogenase I 20.0 82 0.0028 27.8 3.8 36 45-86 88-123 (364)
No 1
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=100.00 E-value=2.5e-63 Score=429.68 Aligned_cols=182 Identities=41% Similarity=0.623 Sum_probs=174.9
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCce
Q 036939 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVI 106 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~i 106 (215)
++|+++|+++|++|++||++||+||||||||+.||+++|+++++++++ ++++||||.+|+.+|+++||++.++++++++
T Consensus 2 ~~qd~~K~~aa~~A~~~V~~gmvvGlGTGSTv~~~i~~L~~~~~~~~l-~i~~V~tS~~t~~~a~~~Gi~l~~l~~~~~i 80 (228)
T 4gmk_A 2 PNQDELKQLVGTKAVEWIKDGMIVGLGTGSTVKYMVDALGKRVNEEGL-DIVGVTTSIRTAEQAKSLGIVIKDIDEVDHI 80 (228)
T ss_dssp CHHHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHHHCC-CCEEEESSHHHHHHHHHTTCCBCCGGGSSCE
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEECchHHHHHHHHHHHHHHhhcCC-cEEEEeCcHHHHHHHHHcCCceeChHHCCcc
Confidence 469999999999999999999999999999999999999999988888 7999999999999999999999999999999
Q ss_pred eEEEecCCcccC---------------------------------------CCCeeEEEccccHHHHHHHHhcchhcCCC
Q 036939 107 DLAIDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDCGC 147 (215)
Q Consensus 107 Dl~iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~G~ 147 (215)
|+|||||||||+ +|||||||+||||.+|.++|+++ |+
T Consensus 81 D~~iDGADEvd~~l~lIKGGGgal~rEKivA~~a~~fI~IaD~sK~v~~LG~fplPVEVip~a~~~v~~~l~~l----G~ 156 (228)
T 4gmk_A 81 DLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNKNMWIVDESKMVDDLGQFPLPVEVIPYGSGTVFKRFEEK----GL 156 (228)
T ss_dssp EEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEEEEEEEEGGGBCSSSCSSCEEEEECSTTHHHHHHHHHHT----TC
T ss_pred ceEeccHHHhhhchhhhhcchHHHHHHHHHHHhhhheEEEeccccccCccCCeeEEEEEehhhHHHHHHHHHHc----CC
Confidence 999999999998 36999999999999999999997 99
Q ss_pred ceeecc-----eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCCeEEecC
Q 036939 148 VAKLRT-----CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215 (215)
Q Consensus 148 ~~~lR~-----p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~Gv~~~~~ 215 (215)
.+++|+ |++|||||||+||+|.+ +.||.+|+++|++| |||||||||.++|+.+|+|++||+++++.
T Consensus 157 ~~~~R~~~~g~~~vTDnGN~IlD~~~~~-i~dp~~l~~~L~~i-~GVVe~GLF~~~a~~vivg~~dGv~~l~~ 227 (228)
T 4gmk_A 157 NPEFRKNEDGSLLHTDSDNYIIDLHLGK-IENPKELGDYLINQ-VGVVEHGLFLDIVNTVIVGRQDGPEVLEA 227 (228)
T ss_dssp CEEECBCTTSSBCCCTTSCEEEEECCSC-CSCHHHHHHHHHTS-TTEEEESEECSCCCEEEEEETTEEEEEEC
T ss_pred ceeecccCCCCeEEecCCCEEEEecCCC-CCCHHHHHHHHhCC-CCEEeeeeecCCCCEEEEEeCCCcEEEec
Confidence 999997 79999999999999996 99999999999999 99999999999999999999999998863
No 2
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.5e-60 Score=411.90 Aligned_cols=179 Identities=36% Similarity=0.607 Sum_probs=169.3
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCce
Q 036939 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVI 106 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~i 106 (215)
|+|+++|+++|++|++||++||+||||||||+.||+++|+++++++++ ++++||||.+|+.+|+++||++.++++++ +
T Consensus 1 M~~d~~K~~aa~~A~~~V~~gmvvGlGTGSTv~~~I~~L~~~~~~~~l-~i~~v~tS~~t~~~a~~~gi~l~~l~~~~-i 78 (226)
T 3ixq_A 1 MSNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGNRIREEEL-TVFGIPTSFEAKMLAMQYEIPLVTLDEYD-V 78 (226)
T ss_dssp -CCHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHHHTC-CCEEEESSHHHHHHHHHTTCCBCCTTTCC-C
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEeCcHHHHHHHHHHHHHhhhhcCC-eeEeecccHHHHHHHHhcCCCcccccccc-c
Confidence 568999999999999999999999999999999999999999998888 59999999999999999999999999995 9
Q ss_pred eEEEecCCcccC-----------------------------------------CCCeeEEEccccHHHHHHHHhcchhcC
Q 036939 107 DLAIDGADEVDP-----------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDC 145 (215)
Q Consensus 107 Dl~iDGaDeVd~-----------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~ 145 (215)
|+|||||||||+ +|||||||+||||.+|.++|+++
T Consensus 79 Dl~iDGADEvd~~~l~lIKGGGgAl~rEKivA~~a~~~I~I~D~sK~v~~LG~~fplPVEVip~a~~~v~~~l~~l---- 154 (226)
T 3ixq_A 79 DIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSEM---- 154 (226)
T ss_dssp SEEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESSTTSSSCEEEEECGGGHHHHHHHHHHT----
T ss_pred cEEEeCcchhccccceEEecchHHHHHHHHHHHHhhheEEEeccccchhhcCCCCCccEEEechHHHHHHHHHHHc----
Confidence 999999999973 47999999999999999999997
Q ss_pred CCceeecc------eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCCeEEecC
Q 036939 146 GCVAKLRT------CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215 (215)
Q Consensus 146 G~~~~lR~------p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~Gv~~~~~ 215 (215)
|+++++|+ |++|||||||+||+|+ +.||.+|+++|++| |||||||||.++ |.+++|++||+++++|
T Consensus 155 G~~~~~R~~~~~~gp~vTDnGN~IlD~~~~--i~dp~~l~~~L~~i-pGVVe~GlF~~~-~~vivg~~~Gv~~i~k 226 (226)
T 3ixq_A 155 GGEAVIRLGDRKRGPVITDNGNMIIDVFMN--IDDAIELEKEINNI-PGVVENGIFTKV-DKVLVGTKKGVKTLKK 226 (226)
T ss_dssp TCEEEECBCSSSSSBCBCTTSCEEEEEECC--CSCHHHHHHHHHTS-TTEEEESEECCC-SEEEEEETTEEEEECC
T ss_pred CCCceEEeeccCCCceEecCCCEEEEecCC--CCCHHHHHHHHhCC-CCEEeeCcccCC-CEEEEEeCCeEEEEeC
Confidence 99999997 9999999999999874 89999999999999 999999999995 8899999999999986
No 3
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=100.00 E-value=9.1e-60 Score=407.09 Aligned_cols=179 Identities=40% Similarity=0.601 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCceeEE
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVIDLA 109 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~iDl~ 109 (215)
+++|+++|++|++||++||+||||||||+.+++++|+++++++++ ++++||||.+|+.+|+++||+++++++.+++|+|
T Consensus 2 ~~~K~~iA~~A~~~V~dg~vIgLGsGST~~~~i~~L~~~~~~~~~-~i~~VttS~~t~~~l~~~Gi~l~~l~~~~~iD~a 80 (225)
T 3l7o_A 2 EELKKIAGVRAAQYVEDGMIVGLGTGSTAYYFVEEVGRRVQEEGL-QVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVT 80 (225)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEECCSTTHHHHHHHHHHHHHHHCC-CCEEEESSHHHHHHHHHHTCCBCCGGGSSCEEEE
T ss_pred hHHHHHHHHHHHHhCCCCCEEEECCcHHHHHHHHHHHHhhhhcCC-CEEEEcCCHHHHHHHhccCceEEecCcccccCEE
Confidence 588999999999999999999999999999999999999887777 7999999999999999999999999999999999
Q ss_pred EecCCcccC---------------------------------------CCCeeEEEccccHHHHHHHHhcchhcCCCcee
Q 036939 110 IDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDCGCVAK 150 (215)
Q Consensus 110 iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~G~~~~ 150 (215)
||||||||+ +|||||||+||||.+|.++|+++ |+.++
T Consensus 81 ~dGADevd~~~~liKGgG~al~rEKiva~~A~~~iviaD~sK~~~~Lg~~plPvEV~p~a~~~v~~~l~~l----G~~~~ 156 (225)
T 3l7o_A 81 VDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTLGAFRLPVEVVQYGAERLFREFEKK----GYKPS 156 (225)
T ss_dssp EECCSEECTTSCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSSCSSCEEEEECSTTHHHHHHHHHHT----TCCEE
T ss_pred EEcCCccCcccCeecCchhhhHHHHHHHHhCCeEEEEEecccchhhcCCCCEEEEEehhHHHHHHHHHHHc----CCceE
Confidence 999999997 35999999999999999999997 99999
Q ss_pred ecc----eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCCeEEecC
Q 036939 151 LRT----CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215 (215)
Q Consensus 151 lR~----p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~Gv~~~~~ 215 (215)
||+ ||+|||||||+||+|.+ +.||.+|+++|++| |||||||||.++|+.+|+|+++|++++++
T Consensus 157 lR~~~~~p~vTDnGn~IlD~~f~~-i~~p~~l~~~l~~i-~GVVe~GlF~~~a~~v~v~~~~g~~~~~~ 223 (225)
T 3l7o_A 157 FREYDGVRFVTDMKNFIIDLDLGS-IPDPIAFGNMLDHQ-VGVVEHGLFNGMVNRVIVAGKDGVRILEA 223 (225)
T ss_dssp ECEETTEECCCTTSCEEEEECCSC-CSCHHHHHHHHHTS-TTEEEESEECSCCSEEEEET---TEEEEC
T ss_pred EEEcCCCcEEcCCCCEEEEecCCC-CCCHHHHHHHHhcC-CCeeeeeeeccCCCEEEEEcCCceEEecc
Confidence 998 99999999999999986 99999999999999 99999999999999999999999888764
No 4
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=100.00 E-value=4.6e-59 Score=408.81 Aligned_cols=195 Identities=30% Similarity=0.495 Sum_probs=172.5
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCC
Q 036939 16 ILSSLSPTSVGLTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGI 95 (215)
Q Consensus 16 ~~~~~~~~~~m~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi 95 (215)
.-+..++|+.|. ++++|+++|++|++||++||+||||||||+.+++++|+++.++| + ++++||||.+|+.+|+++||
T Consensus 12 ~~~~~~~~~~m~-~~e~K~~iA~~A~~~V~dg~vIgLGsGST~~~~i~~L~~~~~~g-l-~ItvVttS~~ta~~l~~~GI 88 (255)
T 3hhe_A 12 LEAQTQGPGSMN-VQQLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANG-L-RVTCVATSQYSEQLCHKFGV 88 (255)
T ss_dssp -----------C-HHHHHHHHHHHHHTTCCTTEEEEECCSHHHHHHHHHHHHHHHTT-C-CEEEEESSHHHHHHHHHTTC
T ss_pred eeecCCCCCCCC-HHHHHHHHHHHHHHhCCCCCEEEECCcHHHHHHHHHHHHhhccC-C-cEEEEcCCHHHHHHHHHcCC
Confidence 335566777775 89999999999999999999999999999999999999987754 6 69999999999999999999
Q ss_pred CeeecCCCCceeEEEecCCcccC---------------------------------------CCCeeEEEccccHHHHHH
Q 036939 96 PLSDLDSHPVIDLAIDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTAN 136 (215)
Q Consensus 96 ~v~~l~~~~~iDl~iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~ 136 (215)
+++++++++++|+|||||||||+ +|||||||+||||.+|.+
T Consensus 89 ~l~~l~~~~~iD~afdGADeVD~~~~lIKGgG~al~rEKiva~~A~~~ivIaD~SK~v~~LG~~plPVEViP~a~~~v~~ 168 (255)
T 3hhe_A 89 PISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGAFALPIEVNPFGIHATRI 168 (255)
T ss_dssp CBCCTTTCCSBSEEEECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSSCSSCEEEEECSTTHHHHHH
T ss_pred cEEecccccccCEEEECCCccccccCeeeCchhhhHHHHHHHHhcCcEEEEEeCCCChhhhCCCCeEEEEchhHHHHHHH
Confidence 99999999999999999999997 369999999999999999
Q ss_pred HHhcchhc--CCCceeecc----eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCC-C
Q 036939 137 RFPDLFKD--CGCVAKLRT----CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKL-G 209 (215)
Q Consensus 137 ~l~~l~~~--~G~~~~lR~----p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~-G 209 (215)
+|+++|.. .|+++++|+ ||+|||||||+||+|.+ |.||++|+++|++| |||||||||.++|+.||+|+++ |
T Consensus 169 ~l~~~~~~~glgg~~~lR~~~~gp~vTDnGN~IlD~~f~~-i~dp~~l~~~l~~i-~GVVe~GLF~~~a~~vivg~~~~G 246 (255)
T 3hhe_A 169 AIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGR-ILQPKLLSEALLAI-PGVVEHGLFLGLASRAIVAMADSQ 246 (255)
T ss_dssp HHHHHHHHHTCCSCEEECEETTEECCCTTSCEEEEECCSC-CSCHHHHHHHHHTS-TTEEEESEECSCCCEEEEECTTSC
T ss_pred HHHhhhccccCCCeEEEeeCCCCcEEcCCCCEEEEeeCCC-cCCHHHHHHHHhcC-CCEeeecccccCCCEEEEEcCCCC
Confidence 99995432 267999998 99999999999999996 99999999999999 9999999999999999999999 9
Q ss_pred eEEecC
Q 036939 210 VTIKNK 215 (215)
Q Consensus 210 v~~~~~ 215 (215)
++++++
T Consensus 247 v~~~~~ 252 (255)
T 3hhe_A 247 IKVLEP 252 (255)
T ss_dssp EEEECG
T ss_pred eEEEec
Confidence 998764
No 5
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=100.00 E-value=6e-59 Score=404.98 Aligned_cols=179 Identities=32% Similarity=0.482 Sum_probs=168.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCcC----CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEE-EecCcHHHHHHHHHCCCCeee
Q 036939 25 VGLTQDELKKIAANKSVEFVKS----GMVVGLGTDSTATHAVDKIGELLHQGKLKNIV-GIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 25 ~m~~~~~~K~~aA~~A~~~V~~----g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~-~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
+||+|+++|+++|++|++||++ ||+||||||||+.+|+++|+++.+ +++ +||||.+|+.+|+++||++.+
T Consensus 7 ~~m~~~~~K~~aA~~A~~~V~d~~~~g~vIGLGtGST~~~~i~~L~~~~~-----~i~~~V~tS~~t~~~~~~~Gi~l~~ 81 (239)
T 3uw1_A 7 LLMTQDELKRLVGEAAARYVTDNVPQGAVIGVGTGSTANCFIDALAAVKD-----RYRGAVSSSVATTERLKSHGIRVFD 81 (239)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHSCTTCEEEECCSHHHHHHHHHHHTTGG-----GSCEEEESSHHHHHHHHHTTCCBCC
T ss_pred ccCCHHHHHHHHHHHHHHHhhccCcCCCEEEECccHHHHHHHHHHHhhhc-----cceEEeCCcHHHHHHHHHcCCcEEe
Confidence 4677999999999999999999 999999999999999999998643 466 799999999999999999999
Q ss_pred cCCCCceeEEEecCCcccC---------------------------------------CCCeeEEEccccHHHHHHHHhc
Q 036939 100 LDSHPVIDLAIDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTANRFPD 140 (215)
Q Consensus 100 l~~~~~iDl~iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~~l~~ 140 (215)
+++++++|+|||||||||+ +|||||||+||||.+|.++|++
T Consensus 82 l~~~~~iD~a~DGADeVd~~l~lIKGgGgal~rEKiva~~A~~~ivIaD~sK~v~~Lg~~plPVEViP~a~~~v~~~l~~ 161 (239)
T 3uw1_A 82 LNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFVCIADASKRVAMLGQFPLPVEVVPMARTAIGRRLAA 161 (239)
T ss_dssp GGGCSCEEEEEECCSEECTTCCEECCSSSCHHHHHHHHHHEEEEEEEEEGGGBCSSBTSSCEEEEECGGGHHHHHHHHHH
T ss_pred cccccccCEEEECCcccCcccCEecCchHHHHHHHHHHHhCCcEEEEEecchhhhhcCCCCeEEEEChhHHHHHHHHHHH
Confidence 9999999999999999998 3699999999999999999999
Q ss_pred chhcCCCceeecc-----eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccc-cccEEEEEcCCCeEEec
Q 036939 141 LFKDCGCVAKLRT-----CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLD-MATTVIIVGKLGVTIKN 214 (215)
Q Consensus 141 l~~~~G~~~~lR~-----p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~-~a~~vivg~~~Gv~~~~ 214 (215)
+ |+.++||+ ||+|||||||+||+|.+ +.||++|+++|++| |||||||||.+ +||.+|+|+++|+++++
T Consensus 162 l----G~~~~lR~~~~g~p~vTDnGN~IlD~~~~~-i~dp~~l~~~l~~i-~GVVe~GlF~~~~a~~vivg~~~Gv~~~~ 235 (239)
T 3uw1_A 162 L----GGVPVLRVKQDGTPYVTDNGNEILDVKGLR-IDDPRALEAAINGW-PGVVTVGLFAQRGADLCLLGTEHGVETLR 235 (239)
T ss_dssp T----TCEEEECBCTTSSBCCCTTSCEEEEEESCC-BSCHHHHHHHHHTS-TTEEEESEECTTCCSEEEEEETTEEEEEE
T ss_pred c----CCCeEEeecCCCCceEccCCCEEEEecCCC-CCCHHHHHHHHcCC-CCEEeecCCcCCCCCEEEEEcCCceEEEe
Confidence 7 89999998 99999999999999986 99999999999999 99999999999 59999999999988765
No 6
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=100.00 E-value=1.7e-57 Score=393.12 Aligned_cols=179 Identities=37% Similarity=0.602 Sum_probs=169.4
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCce
Q 036939 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVI 106 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~i 106 (215)
|+++++|+++|++|++||++||+||||||||+.+++++|+++.+++++ ++++||||.+++.+|+++|++++++++++ +
T Consensus 1 m~~~~~K~~iA~~A~~~I~~g~~IglgsGST~~~~~~~L~~~~~~~~l-~itvVtnS~~~a~~l~~~gi~v~~l~~~~-i 78 (226)
T 2pjm_A 1 MSNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGNRIREEEL-TVFGIPTSFEAKMLAMQYEIPLVTLDEYD-V 78 (226)
T ss_dssp -CCHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHHHTC-CCEEEESSHHHHHHHHHTTCCBCCTTTCC-C
T ss_pred CChHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHhhhhccCC-cEEEEeCcHHHHHHHHhcCCeEEeecccc-C
Confidence 357899999999999999999999999999999999999998766667 79999999999999999999999999997 9
Q ss_pred eEEEecCCcccC-----------------------------------------CCCeeEEEccccHHHHHHHHhcchhcC
Q 036939 107 DLAIDGADEVDP-----------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDC 145 (215)
Q Consensus 107 Dl~iDGaDeVd~-----------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~ 145 (215)
|+|||||||||+ +|||||||+||||.+|.++|+++
T Consensus 79 D~afdGaDevd~~t~~likGgg~al~rEKiva~~A~~~IviaD~sK~~~~Lg~~~~lPvEV~p~a~~~v~~~l~~~---- 154 (226)
T 2pjm_A 79 DIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSEM---- 154 (226)
T ss_dssp SEEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESSTTSSSCEEEEECGGGHHHHHHHHHHT----
T ss_pred CEEEEcCceeccccCceeeccchhhHHHHHHHHHhCcEEEEEecchhhhccCCCCCEEEEEehhHHHHHHHHHHHc----
Confidence 999999999986 36999999999999999999997
Q ss_pred CCceeecc------eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCCeEEecC
Q 036939 146 GCVAKLRT------CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215 (215)
Q Consensus 146 G~~~~lR~------p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~Gv~~~~~ 215 (215)
|++++||+ ||+|||||||+|| |.+ +.||++|+++|++| |||||||||.+ ||.+|+|+++|+++++|
T Consensus 155 g~~~~lR~~~~~~gp~vTDnGn~IlD~-~~~-i~~p~~l~~~l~~i-~GVve~GlF~~-a~~v~~~~~~g~~~~~~ 226 (226)
T 2pjm_A 155 GGEAVIRLGDRKRGPVITDNGNMIIDV-FMN-IDDAIELEKEINNI-PGVVENGIFTK-VDKVLVGTKKGVKTLKK 226 (226)
T ss_dssp TCEEEECBCSSSSSBCBCTTSCEEEEE-ECC-CSCHHHHHHHHHTS-TTEEEESEECC-CSEEEEEETTEEEEECC
T ss_pred CCceEEeecCCCCCcEEcCCCCEEEEe-CCC-CCCHHHHHHHhcCC-CCEEeecCccC-CCEEEEEcCCceEEccC
Confidence 89999997 8999999999999 985 99999999999999 99999999999 99999999999999886
No 7
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=100.00 E-value=7.5e-57 Score=388.66 Aligned_cols=177 Identities=31% Similarity=0.460 Sum_probs=166.0
Q ss_pred CCCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEE-ecCcHHHHHHHHHCCCCeeecCCCC
Q 036939 26 GLTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVG-IPTSKTTHDQAVSLGIPLSDLDSHP 104 (215)
Q Consensus 26 m~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~-V~tS~~t~~~~~~~Gi~v~~l~~~~ 104 (215)
+|+++++|+++|++|++||++||+||||||||+.+++++|+++. +++++ ||||.+++.+|+++|+++++++++.
T Consensus 6 ~~~~~~~K~~iA~~A~~~V~~g~~IglgsGST~~~~i~~L~~~~-----~~itv~VtnS~~~a~~l~~~gi~l~~l~~~~ 80 (224)
T 3kwm_A 6 KNNQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVNYR-----DKIKTVVSSSEDSTRKLKALGFDVVDLNYAG 80 (224)
T ss_dssp -CCHHHHHHHHHHHHHTTCCSSEEEEECCSHHHHHHHHHGGGCT-----TTEEEEEESCHHHHHHHHHTTCCBCCHHHHC
T ss_pred hcChHHHHHHHHHHHHHhCCCCCEEEECCcHHHHHHHHHHHhhc-----CceEEEECCcHHHHHHHHHcCCeEEecCccc
Confidence 46789999999999999999999999999999999999998752 26998 9999999999999999999999988
Q ss_pred ceeEEEecCCcccC---------------------------------------CCCeeEEEccccHHHHHHHHhcchhcC
Q 036939 105 VIDLAIDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDC 145 (215)
Q Consensus 105 ~iDl~iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~ 145 (215)
++|+|||||||||+ +|||||||+||||.+|.++|+++
T Consensus 81 ~iD~afdGADevd~~~~liKGgg~al~rEKiva~~A~~~iviaD~sK~~~~Lg~~plPvEV~p~a~~~v~~~l~~l---- 156 (224)
T 3kwm_A 81 EIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTLGNFPLPIEVIPMARSYIARQIVKL---- 156 (224)
T ss_dssp SEEEEEECCSEECTTSCEECCSSSCHHHHHHHHHTEEEEEEEEEGGGBCSSBCSSCEEEEECGGGHHHHHHHHHHT----
T ss_pred cccEEEECCCccccccCeecCchhhHHHHHHHHHhcCcEEEEEeCchhhhhcCCCCeEEEEChHHHHHHHHHHHHc----
Confidence 99999999999997 36999999999999999999997
Q ss_pred CCceeecceeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccc-cccEEEEEcCCCeEEe
Q 036939 146 GCVAKLRTCYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLD-MATTVIIVGKLGVTIK 213 (215)
Q Consensus 146 G~~~~lR~p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~-~a~~vivg~~~Gv~~~ 213 (215)
|++++||++++|||||||+||+|++ +.||++|+++|++| |||||||||.+ .++.+|+|+++|++++
T Consensus 157 g~~~~lR~~~vTDnGn~IlD~~~~~-i~dp~~l~~~l~~i-~GVVe~GlF~~~~~~~vi~g~~~g~~~~ 223 (224)
T 3kwm_A 157 GGQPVYREQTITDNGNVILDVYNLK-IDNPLKLETELNQI-TGVVTNGIFALKPADTVIMATKDSNIVV 223 (224)
T ss_dssp TCEEEECTTCCCTTSCEEEEEESCC-BSCHHHHHHHHHTS-TTEEEESEECSSCCSEEEEECTTSCEEE
T ss_pred CCCeEEecCcCccCCCEEEEcCCCC-CCCHHHHHHHHcCC-CCEeeeCcccCCcCCEEEEEcCCceEEe
Confidence 8999999999999999999999996 99999999999999 99999999998 4899999999998765
No 8
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=100.00 E-value=1.2e-55 Score=382.02 Aligned_cols=183 Identities=39% Similarity=0.643 Sum_probs=171.1
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCce
Q 036939 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVI 106 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~i 106 (215)
|+++++|+++|++|+++|++||+||||||||+.+++++|++++++++++++++||||.+++.+|+++|++++.++++.++
T Consensus 1 m~~~~~K~~IA~~Aa~~I~dg~~I~LdsGST~~~~a~~L~~~~~~~~l~~itvVTnS~~~a~~l~~~gi~vi~l~~~~~~ 80 (229)
T 1lk5_A 1 MNVEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAI 80 (229)
T ss_dssp CCHHHHHHHHHHHHGGGCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCGGGCSCE
T ss_pred CChHHHHHHHHHHHHHhCCCCCEEEEcChHHHHHHHHHHhhhhhhccCCCEEEECCcHHHHHHHHhCCCeEEEeCCcccC
Confidence 45789999999999999999999999999999999999998766555546999999999999999999999999888899
Q ss_pred eEEEecCCcccC----------------------------------------CCCeeEEEccccHHHHHHHHhcchhcCC
Q 036939 107 DLAIDGADEVDP----------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDCG 146 (215)
Q Consensus 107 Dl~iDGaDeVd~----------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~G 146 (215)
|+||||||+||+ +|||||||+||||.+|.++|+++ |
T Consensus 81 D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~lg~~~~lPvEV~p~~~~~v~~~l~~l----g 156 (229)
T 1lk5_A 81 DVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSIF----N 156 (229)
T ss_dssp EEEEECCSEECTTCCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSTTSSCCEEEEECGGGHHHHHHHGGGG----T
T ss_pred CEEEECCCeECCCCCeecCHHHHHHHHHHHHHhcCCeEEEEchhhhhhhcCCCCCEEEEECcchHHHHHHHHHHc----C
Confidence 999999999996 36999999999999999999997 8
Q ss_pred Cceeecc------eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCCeEEecC
Q 036939 147 CVAKLRT------CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLGVTIKNK 215 (215)
Q Consensus 147 ~~~~lR~------p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~Gv~~~~~ 215 (215)
++++||+ ||+|||||||+||+|.+ +.||.+|+++|++| |||||||||.++++.+|+|+++|+++++|
T Consensus 157 ~~~~~R~~~~~~~~~vTdnGn~IlD~~~~~-i~~p~~l~~~l~~i-~GVve~GlF~~~a~~~~~~~~~g~~~~~~ 229 (229)
T 1lk5_A 157 AKAELRMGVNKDGPVITDNGNFIIDAKFPR-IDDPLDMEIELNTI-PGVIENGIFADIADIVIVGTREGVKKLER 229 (229)
T ss_dssp CEEEECBCSSSSSBCCCTTSCEEEEEECSC-CSCHHHHHHHHHTS-TTEEEESEECSCCCEEEEEETTEEEEEEC
T ss_pred CCeEEeeccCCCCcEEcCCCCEEEEeeCCC-CCCHHHHHHHHhcC-CCcceecccccCCCEEEEEeCCCeEEeCC
Confidence 9999995 89999999999999986 99999999999999 99999999999999999999999988865
No 9
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=100.00 E-value=1.3e-55 Score=385.21 Aligned_cols=185 Identities=40% Similarity=0.653 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHh-cCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCcee
Q 036939 29 QDELKKIAANKSVE-FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVID 107 (215)
Q Consensus 29 ~~~~K~~aA~~A~~-~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~iD 107 (215)
++++|+++|++|++ +|++||+||||||||+.+++++|++++++++++++++||||.+++.+|+++|++++.+++++++|
T Consensus 9 ~~~~K~~iA~~Aa~~~I~dg~~IgLgsGST~~~~~~~L~~~~~~~~l~~itvVTnS~~~a~~l~~~gi~v~~l~~~~~iD 88 (244)
T 2f8m_A 9 MDSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVLERIDNLLKSGKLKDVVCIPTSIDTELKARKLGIPLTTLEKHSNID 88 (244)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEEECCSTTTHHHHHHHHHHHHHTSSCSCEEEESSHHHHHHHHHHTCCBCCCCSSCCBS
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEcChHHHHHHHHHHhhhhhccCCCCEEEECCcHHHHHHHHHCCCeEEEecccCcCC
Confidence 67899999999999 99999999999999999999999987766666579999999999999999999999999998999
Q ss_pred EEEecCCcccC-----------------------------------------CCCeeEEEccccHHHHHHHHhcchhcCC
Q 036939 108 LAIDGADEVDP-----------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDCG 146 (215)
Q Consensus 108 l~iDGaDeVd~-----------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~G 146 (215)
+|||||||||+ +|||||||+||||.+|.++|+++|...|
T Consensus 89 ~afdGaDeId~~~glikg~g~Al~kekiva~~A~~~ivlaD~SK~~~~~Lg~~~plPvEV~p~a~~~v~~~l~~l~~~~G 168 (244)
T 2f8m_A 89 ITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDESKLCTNGLGMTGAVPIEILTFGYEKIIENLLKIYTLKG 168 (244)
T ss_dssp EEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSCTTCSSCEEEEECSTTHHHHHHHHTTSTTTTT
T ss_pred EEEECCcccCCCCCcccCHHHHHHHHHHHHHhhCcEEEEEECCccccccCCCCCcEEEEEcccHHHHHHHHHHHHhhccC
Confidence 99999999997 2589999999999999999999865558
Q ss_pred Cceeecc----eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCC-eEEec
Q 036939 147 CVAKLRT----CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLG-VTIKN 214 (215)
Q Consensus 147 ~~~~lR~----p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~G-v~~~~ 214 (215)
+.++||+ ||+|||||||+||+|.+++.||.+|+++|++| |||||||||.++|+.+|+|++|| +.+++
T Consensus 169 ~~~~lR~~~~~p~vTDnGn~IlD~~f~~~i~dp~~l~~~l~~i-~GVVe~GlF~~~a~~vi~~~~~G~v~~~~ 240 (244)
T 2f8m_A 169 CTYKIRKRNGEIFITDNKNYIVDFFFTEPIQDLLETCTRIKMT-TGVVDHGIFVNMTNVALISKHDGTVLTLN 240 (244)
T ss_dssp CEEEECEETTEECCCTTSCEEEEEECSSCCSSHHHHHHHHHTS-TTEEEESEECSCCSEEEEECTTSCEEEEE
T ss_pred CceEEEEcCCCcEEcCCCCEEEEecCCCCCCCHHHHHHHHhcC-CCcceeeeEecCCCEEEEEeCCCeEEeec
Confidence 9999995 89999999999999986589999999999999 99999999999999999999999 55544
No 10
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=100.00 E-value=5.8e-54 Score=370.92 Aligned_cols=180 Identities=43% Similarity=0.658 Sum_probs=166.6
Q ss_pred CCCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCc
Q 036939 26 GLTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPV 105 (215)
Q Consensus 26 m~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~ 105 (215)
|+++.++|+++|++|+++|++||+||||||||+.+++++|+++.++++++++++||||.+++.+|++.|++++.+++ .+
T Consensus 2 ~~~~~~~K~~IA~~Aa~~I~dg~~I~LgsGST~~~~~~~L~~~~~~~~l~~itvVTnS~~~a~~l~~~gi~v~~l~~-~~ 80 (227)
T 1uj6_A 2 ERPLESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPP-EG 80 (227)
T ss_dssp -CTTHHHHHHHHHHHHTTCCTTCEEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHHHTTCCBCCCCT-TC
T ss_pred CCchHHHHHHHHHHHHHHCCCCCEEEEcCCHHHHHHHHHHhhhhhhcCCCCEEEECCcHHHHHHHHhCCCeEEEcCC-Cc
Confidence 45578999999999999999999999999999999999999876655553499999999999999999999999988 59
Q ss_pred eeEEEecCCcccC---------------------------------------CCCeeEEEccccHHHHHHHHhcchhcCC
Q 036939 106 IDLAIDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDCG 146 (215)
Q Consensus 106 iDl~iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~G 146 (215)
+|+||||||+||+ +|||||||+||||.+|.++|+++ |
T Consensus 81 ~D~af~Gadgvd~~~~~~~~~g~a~~kekiva~~a~~~ivlaD~sK~~~~lg~~~lPvEV~p~~~~~v~~~l~~~----g 156 (227)
T 1uj6_A 81 VDLAIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADHTKKVPVLGRGPVPVEIVPFGYRATLKAIADL----G 156 (227)
T ss_dssp EEEEEECCSEEEGGGEEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSSCSSCEEEEECSTTHHHHHHHHHTT----T
T ss_pred CCEEEECCCccCccccEECCHHHHHHHHHHHHhccCCEEEEEEcchhccccCCCceeEEECcCHHHHHHHHHHhh----C
Confidence 9999999999986 36999999999999999999997 8
Q ss_pred Cceeecc----eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEEEEcCCC-eEE
Q 036939 147 CVAKLRT----CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVIIVGKLG-VTI 212 (215)
Q Consensus 147 ~~~~lR~----p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vivg~~~G-v~~ 212 (215)
++++||+ ||+|||||||+||+|.+ +.||.+|+++|++| |||||||||.++++.+|+|+++| +++
T Consensus 157 ~~~~~R~~~~~~~vTdnGn~ilD~~~~~-i~~~~~l~~~l~~i-~GVve~GlF~~~a~~~~~~~~~g~~~~ 225 (227)
T 1uj6_A 157 GEPELRMDGDEFYFTDGGHLIADCRFGP-IGDPLGLHRALLEI-PGVVETGLFVGMATRALVAGPFGVEEL 225 (227)
T ss_dssp CCEEECEETTEECCCTTSCEEEEECCCS-CSCHHHHHHHHHTS-TTEEEESEECSCCSEEEEEETTEEEEE
T ss_pred CCeEEEecCCCCEEcCCCCEEEEeeCCC-CCCHHHHHHHHhCC-CCcceeccEecCCCEEEEEeCCCeEEe
Confidence 9999995 89999999999999986 99999999999999 99999999999999999999999 544
No 11
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-53 Score=376.26 Aligned_cols=184 Identities=32% Similarity=0.491 Sum_probs=163.2
Q ss_pred CCCCCCHHHHHHHHHHHHHh-cCc--CCCEEEeCcChhHHHHHHHHHhHHhcCCCC----CEEEecCcHHHHHHHHHCCC
Q 036939 23 TSVGLTQDELKKIAANKSVE-FVK--SGMVVGLGTDSTATHAVDKIGELLHQGKLK----NIVGIPTSKTTHDQAVSLGI 95 (215)
Q Consensus 23 ~~~m~~~~~~K~~aA~~A~~-~V~--~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~----~i~~V~tS~~t~~~~~~~Gi 95 (215)
|+.+|+++++|+++|++|++ +|+ +||+||||||||+.+++++|++++++++++ ++++||||.+++.+|+++|+
T Consensus 12 ~~~~~~~~~~K~~IA~~Aa~~~I~~~dg~~IgLgsGST~~~~a~~L~~~~~~~~l~~~~~~itvVTnS~~~a~~l~~~gi 91 (264)
T 1xtz_A 12 ESLGNPLEDAKRAAAYRAVDENLKFDDHKIIGIGSGSTVVYVAERIGQYLHDPKFYEVASKFICIPTGFQSRNLILDNKL 91 (264)
T ss_dssp -------CHHHHHHHHHHHHHHCCTTTCCEEEECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEEEESSHHHHHHHHHTTC
T ss_pred cccCCCHHHHHHHHHHHHHHhccCCCCCCEEEEcChHHHHHHHHHHhHhhhccccccccCCEEEECCcHHHHHHHHHCCC
Confidence 44566678999999999999 999 999999999999999999999876444331 48999999999999999999
Q ss_pred CeeecCCCCceeEEEecCCcccC-----------------------------------------CC--CeeEEEccccHH
Q 036939 96 PLSDLDSHPVIDLAIDGADEVDP-----------------------------------------GL--AVPVEVVPVCWK 132 (215)
Q Consensus 96 ~v~~l~~~~~iDl~iDGaDeVd~-----------------------------------------K~--plPVEV~P~a~~ 132 (215)
+++.++++.++|+|||||||||+ +| ||||||+||||.
T Consensus 92 ~v~~l~~~~~iD~afdGADgId~~~~likg~g~A~~kekiva~~A~~~IvlaD~SK~~~~~Lg~~~~~plPVEV~p~a~~ 171 (264)
T 1xtz_A 92 QLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYV 171 (264)
T ss_dssp EECCTTTCCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEGGGBCSSSBTSSCCSCEEEEECGGGHH
T ss_pred eEEEehhcCcCCEEEECCcccCCCCCeecCHHHHHHHHHHHHHhhCcEEEEEEccccccccccccCCCCEeEEEChhHHH
Confidence 99999988899999999999996 36 899999999999
Q ss_pred HHHHHH-hcchhcCCC-ceeecc-------eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeeccccccEEE
Q 036939 133 FTANRF-PDLFKDCGC-VAKLRT-------CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMATTVI 203 (215)
Q Consensus 133 ~v~~~l-~~l~~~~G~-~~~lR~-------p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~~vi 203 (215)
+|.++| +++ |+ +++||+ ||+|||||||+||+|.+ +.||.+|+++|++| |||||||||.++++.+|
T Consensus 172 ~v~~~l~~~~----g~~~~~lR~~~~~~~~p~vTDnGN~IlD~~f~~-i~dp~~l~~~l~~i-~GVVe~GlF~~~a~~vi 245 (264)
T 1xtz_A 172 RVKNDLLEQL----HAEKVDIRQGGSAKAGPVVTDNNNFIIDADFGE-ISDPRKLHREIKLL-VGVVETGLFIDNASKAY 245 (264)
T ss_dssp HHHHHHHHTS----CCSEEEECEETTTEEEECCCTTSCEEEEEECSS-BSCHHHHHHHHHTS-TTEEEESEECSCCSEEE
T ss_pred HHHHHHHHHc----CCCCceEeecccCCCCCEEcCCCCEEEEeeCCC-CCCHHHHHHHHhcC-CCccccceEecCCCEEE
Confidence 999999 554 77 999994 79999999999999997 99999999999999 99999999999999999
Q ss_pred EEcCCCeEE
Q 036939 204 IVGKLGVTI 212 (215)
Q Consensus 204 vg~~~Gv~~ 212 (215)
+|++||+.+
T Consensus 246 ~~~~~G~~~ 254 (264)
T 1xtz_A 246 FGNSDGSVE 254 (264)
T ss_dssp EECTTSCEE
T ss_pred EEeCCceEE
Confidence 999999444
No 12
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=100.00 E-value=9.5e-53 Score=361.80 Aligned_cols=176 Identities=29% Similarity=0.491 Sum_probs=164.7
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEE-ecCcHHHHHHHHHCCCCeeecCCCCc
Q 036939 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVG-IPTSKTTHDQAVSLGIPLSDLDSHPV 105 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~-V~tS~~t~~~~~~~Gi~v~~l~~~~~ 105 (215)
|+++++|+++|++|+++|++||+||||||||+.+++++|+++ ++ ++++ ||||.+++.+++++|++++.++++.+
T Consensus 1 m~~~~~K~~IA~~Aa~~I~dg~~I~LdsGST~~~la~~L~~~--~~---~itv~VTnS~~~a~~l~~~gi~vi~l~~~~~ 75 (219)
T 1m0s_A 1 MNQLEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALGTI--KD---KIQGAVAASKESEELLRKQGIEVFNANDVSS 75 (219)
T ss_dssp CCHHHHHHHHHHHHGGGCCTTSEEEECCSHHHHHHHHHHHTT--GG---GSCEEEESSHHHHHHHHHTTCCBCCGGGCSC
T ss_pred CCcHHHHHHHHHHHHHhCCCCCEEEEcChHHHHHHHHHHhcc--CC---CEEEEECChHHHHHHHHhCCCeEEEeCcccc
Confidence 467899999999999999999999999999999999999864 11 4889 99999999999999999999988789
Q ss_pred eeEEEecCCcccC----------------------------------------CCCeeEEEccccHHHHHHHHhcchhcC
Q 036939 106 IDLAIDGADEVDP----------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDC 145 (215)
Q Consensus 106 iDl~iDGaDeVd~----------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~ 145 (215)
+|+||||||+||+ +|||||||+||||.+|.++|+++
T Consensus 76 ~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~lg~~~~lPvEV~p~~~~~v~~~l~~l---- 151 (219)
T 1m0s_A 76 LDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFPLPVEVIPMARSQVGRKLAAL---- 151 (219)
T ss_dssp EEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEEEEEEEEGGGBCSSTTSSSCEEEEECGGGHHHHHHHHHHT----
T ss_pred CCEEEECcCeECCCCCeecCHHHHHHHHHHHHHhcCcEEEEEeCcHHhhccCCCCCEEEEECcchHHHHHHHHHHc----
Confidence 9999999999996 36999999999999999999997
Q ss_pred CCceeecceeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeecc-ccccEEEEEcCCCeEEe
Q 036939 146 GCVAKLRTCYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFL-DMATTVIIVGKLGVTIK 213 (215)
Q Consensus 146 G~~~~lR~p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~-~~a~~vivg~~~Gv~~~ 213 (215)
|++++||+-++|||||||+||+|.+ +.||.+|+++|++| |||||||||. ++++.+|+|+++|++++
T Consensus 152 g~~~~~R~g~vTdnGn~IlD~~~~~-i~~p~~l~~~l~~i-~GVve~GlF~~~~a~~~~~~~~~g~~~~ 218 (219)
T 1m0s_A 152 GGSPEYREGVVTDNGNVILDVHNFS-ILNPVEIEKELNNV-AGVVTNGIFALRGADVVIVGTPEGAKVI 218 (219)
T ss_dssp TCEEEECTTCCCTTSCEEEEEESCC-CSCHHHHHHHHHTS-TTEEEESEECTTCCSEEEEEETTEEEEE
T ss_pred CCCcEeeCceEcCCCCEEEEecCCC-CCCHHHHHHHHhcC-CCeeeeccEecCCCCEEEEEeCCCeEEc
Confidence 8999999669999999999999996 99999999999999 9999999999 99999999999998876
No 13
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=100.00 E-value=3e-53 Score=364.95 Aligned_cols=178 Identities=35% Similarity=0.527 Sum_probs=122.3
Q ss_pred CCHHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEE-ecCcHHHHHHHHHCCCCeeecCCCCc
Q 036939 27 LTQDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVG-IPTSKTTHDQAVSLGIPLSDLDSHPV 105 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~-V~tS~~t~~~~~~~Gi~v~~l~~~~~ 105 (215)
|+++++|+++|++|+++|++||+||||||||+.+++++|+++ ++ ++++ ||||.+++.+++++|++++.++++.+
T Consensus 1 m~~~~~K~~IA~~Aa~lI~dg~~I~LdsGST~~~la~~L~~~--~~---~itv~VTnS~~~a~~l~~~gi~vi~l~~~~~ 75 (219)
T 1o8b_A 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTM--KG---QIEGAVSSSDASTEKLKSLGIHVFDLNEVDS 75 (219)
T ss_dssp ----------------------CEEECCSCC--------------------CCEEESCCC------------CCGGGCSC
T ss_pred CCcHHHHHHHHHHHHHhCCCCCEEEEcChHHHHHHHHHHhcc--CC---CEEEEECCcHHHHHHHHhCCCeEEEeCccCc
Confidence 356789999999999999999999999999999999999864 11 5889 99999999999999999999988889
Q ss_pred eeEEEecCCcccC---------------------------------------CCCeeEEEccccHHHHHHHHhcchhcCC
Q 036939 106 IDLAIDGADEVDP---------------------------------------GLAVPVEVVPVCWKFTANRFPDLFKDCG 146 (215)
Q Consensus 106 iDl~iDGaDeVd~---------------------------------------K~plPVEV~P~a~~~v~~~l~~l~~~~G 146 (215)
+|+||||||+||+ +|||||||+||||.+|.++|+++ |
T Consensus 76 ~D~af~Gadgid~~~~~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~lg~~~lPvEV~p~~~~~v~~~l~~l----g 151 (219)
T 1o8b_A 76 LGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKL----G 151 (219)
T ss_dssp EEEEEECCSEECTTSCEECCCCC-HHHHHHHHHHEEEEEEEEEGGGBCSSBTSSCEEEEECGGGHHHHHHHHHHT----T
T ss_pred CCEEEECcceECCCCCeecCHHHHHHHHHHHHHhcCcEEEEEeCcccccccCCCcEEEEEChhHHHHHHHHHHHc----C
Confidence 9999999999996 36999999999999999999997 8
Q ss_pred CceeecceeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeecc-ccccEEEEEcCCCeEEecC
Q 036939 147 CVAKLRTCYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFL-DMATTVIIVGKLGVTIKNK 215 (215)
Q Consensus 147 ~~~~lR~p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~-~~a~~vivg~~~Gv~~~~~ 215 (215)
++++||+-++|||||||+||+|.+ +.||.+|+++|++| |||||||||. ++||.+|+|+++|+++++|
T Consensus 152 ~~~~~R~g~vTdnGn~IlD~~~~~-i~~p~~l~~~l~~i-~GVve~GlF~~~~a~~~~~~~~~g~~~~~~ 219 (219)
T 1o8b_A 152 GRPEYRQGVVTDNGNVILDVHGME-ILDPIAMENAINAI-PGVVTVGLFANRGADVALIGTPDGVKTIVK 219 (219)
T ss_dssp CEEEECTTCCCTTSCEEEEEESCC-BSCHHHHHHHHHTS-TTEEEESEECSSCCSEEEEEETTEEEEEC-
T ss_pred CCcEeeCceEeCCCCEEEEeeCCC-CCCHHHHHHHHhcC-CCcceeeeEecCCCCEEEEEeCCCeEEecC
Confidence 999999669999999999999986 99999999999999 9999999999 9999999999999998875
No 14
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=97.96 E-value=3.3e-05 Score=67.70 Aligned_cols=99 Identities=22% Similarity=0.221 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHhcCcCCCEEE-eCcChhHHHHHHHHHhHHhcCCCCCEEEec-C------cHHHHHHHHHCCCCeeecC
Q 036939 30 DELKKIAANKSVEFVKSGMVVG-LGTDSTATHAVDKIGELLHQGKLKNIVGIP-T------SKTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIG-LGsGSTv~~~i~~L~~~~~~~~l~~i~~V~-t------S~~t~~~~~~~Gi~v~~l~ 101 (215)
.+.|+++|+.|+++|++|++|- .|.|+|+..+++.+.++ | ++++++. . +..++..+.+.||++.-+.
T Consensus 93 ~~~~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~---~--~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~ 167 (276)
T 1vb5_A 93 EEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKER---K--KRFKVILTESSPDYEGLHLARELEFSGIEFEVIT 167 (276)
T ss_dssp HHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHT---T--CCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHc---C--CeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEc
Confidence 4679999999999999999988 99999999999988642 2 1466666 5 6788888988999977332
Q ss_pred C------CCceeEEEecCCcccC------------------CCCeeEEEccccHHH
Q 036939 102 S------HPVIDLAIDGADEVDP------------------GLAVPVEVVPVCWKF 133 (215)
Q Consensus 102 ~------~~~iDl~iDGaDeVd~------------------K~plPVEV~P~a~~~ 133 (215)
+ ..++|..|-|||.|.. .+.+|+=|.-...+.
T Consensus 168 dsa~~~~m~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~K~ 223 (276)
T 1vb5_A 168 DAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKF 223 (276)
T ss_dssp GGGHHHHHTTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGB
T ss_pred HHHHHHHHccCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEecccccc
Confidence 1 2479999999999976 247788777655543
No 15
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=97.65 E-value=5.1e-05 Score=66.75 Aligned_cols=83 Identities=14% Similarity=0.200 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhc----CcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc-------------HH-HHHHHHH
Q 036939 31 ELKKIAANKSVEF----VKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS-------------KT-THDQAVS 92 (215)
Q Consensus 31 ~~K~~aA~~A~~~----V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS-------------~~-t~~~~~~ 92 (215)
..|+.+|++|+++ |++|++|||++|||...++++|.+.. ..+++++|+.. .. ...++..
T Consensus 90 ~~k~~ia~~AA~~l~~~i~~~~~igl~~GsT~~~~~~~L~~~~---~~~~~~vv~l~ggl~~~~~~~~~~~~i~~~la~~ 166 (315)
T 2w48_A 90 EQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRS---QSRQVICVPIIGGPSGKLESRYHVNTLTYGAAAR 166 (315)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHTTSCCCS---SCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHhhcccc---CCCCcEEEEcCCCCCCCCccccCHHHHHHHHHHH
Confidence 4799999999997 89999999999999999999885311 12468888841 22 3455666
Q ss_pred CCCCeeec---CC----------------------CCceeEEEecCCcc
Q 036939 93 LGIPLSDL---DS----------------------HPVIDLAIDGADEV 116 (215)
Q Consensus 93 ~Gi~v~~l---~~----------------------~~~iDl~iDGaDeV 116 (215)
.|.+...+ .. ..++|++|-|+...
T Consensus 167 ~~~~~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIGg~ 215 (315)
T 2w48_A 167 LKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSP 215 (315)
T ss_dssp TTCEECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCBCT
T ss_pred HCCceeEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccCcc
Confidence 67654311 11 14799999999843
No 16
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=97.18 E-value=0.00019 Score=64.08 Aligned_cols=86 Identities=7% Similarity=0.057 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhc----CcC-CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec-----------CcHHHHHHH-HH
Q 036939 30 DELKKIAANKSVEF----VKS-GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP-----------TSKTTHDQA-VS 92 (215)
Q Consensus 30 ~~~K~~aA~~A~~~----V~~-g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~-----------tS~~t~~~~-~~ 92 (215)
+..|+.+|++|+++ |++ |++|||++|||...++++|.+.- -..+++++|+ .+......+ ..
T Consensus 121 ~~~k~~ia~~AA~~l~~~i~~~~~~igl~~GsT~~~~~~~L~~~~--~~~~~v~vv~l~ggl~~~~~~~~~~i~~~la~~ 198 (345)
T 2o0m_A 121 KKVLSDFGDVLTNTLNLLLPNGENTIAVMGGTTMAMVAENMGSLE--TEKRHNLFVPARGGIGEAVSVQANSISAVMANK 198 (345)
T ss_dssp THHHHHHHHHHHHHHHHHCCSEEEEEEECCSHHHHHHHHTCCCCC--CSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCcCCCEEEECCcHHHHHHHHHhhhcc--CCCCCcEEEEcCCcCCCCcccCHHHHHHHHHHH
Confidence 34799999999996 899 99999999999999999985410 0123689999 555555444 44
Q ss_pred CCCCeeec------C--------C----------CCceeEEEecCCccc
Q 036939 93 LGIPLSDL------D--------S----------HPVIDLAIDGADEVD 117 (215)
Q Consensus 93 ~Gi~v~~l------~--------~----------~~~iDl~iDGaDeVd 117 (215)
.|.+...+ + + ..++|++|-|....+
T Consensus 199 ~~~~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~~ 247 (345)
T 2o0m_A 199 TGGNYRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRAL 247 (345)
T ss_dssp HTCEECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEHH
T ss_pred hCCceEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCch
Confidence 47653311 0 1 136899999988765
No 17
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=96.64 E-value=0.0012 Score=56.96 Aligned_cols=46 Identities=9% Similarity=0.208 Sum_probs=35.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHh----cCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 22 PTSVGLTQDELKKIAANKSVE----FVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 22 ~~~~m~~~~~~K~~aA~~A~~----~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
+|+.-.+.+..++.+|++|++ ++++|++||+++|+|+..++++|..
T Consensus 32 vp~~~~~~~~~~~~lg~~aA~~L~~~l~~~~vIGv~wG~Tl~~v~~~l~~ 81 (266)
T 3efb_A 32 VSGNDEDEETQLAMMGLHGAQLLDRLLEPGDIVGFSWGRAVSALVENLPQ 81 (266)
T ss_dssp ECCCSCCHHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHTCCC
T ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhCCCCCEEEEcccHHHHHHHHhcCc
Confidence 344444566667777777777 4589999999999999999999864
No 18
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=96.32 E-value=0.0026 Score=55.09 Aligned_cols=50 Identities=20% Similarity=0.284 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHh----cCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec
Q 036939 28 TQDELKKIAANKSVE----FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP 81 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~----~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~ 81 (215)
+.+..++.+|++|++ ++++|++||+++|+|+..++++|... ..+++++||
T Consensus 33 ~~~~~~~~lg~aaA~~L~~~l~~~~vIGv~wG~Tl~~v~~~l~~~----~~~~~~~V~ 86 (267)
T 3kv1_A 33 NTNEQRKQVAALVSSYLNNNLQEGMAVAVGQGQNVAAVADHAGIV----TQRNARFVS 86 (267)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHCCCCC----CCCCCEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCEEEECchHHHHHHHHhcccc----CCCCCEEEe
Confidence 345567778888777 55899999999999999999988542 123566654
No 19
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=96.30 E-value=0.0067 Score=52.44 Aligned_cols=50 Identities=12% Similarity=0.179 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHh----cCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec
Q 036939 28 TQDELKKIAANKSVE----FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP 81 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~----~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~ 81 (215)
+.++.++.+|++|++ ++++|++||+++|+|+..++++|... ..+++++||
T Consensus 34 ~~~~~~~~lg~~aA~~L~~~l~~~~viGv~wG~T~~~v~~~l~~~----~~~~~~vV~ 87 (267)
T 3nze_A 34 NEAETLDRVAMQAARTIGPLVDSNAIIGVAWGATLSAVSRHLTRK----MTHDSIVVQ 87 (267)
T ss_dssp CHHHHHHHHHHHHHHHHGGGCCSSCEEEECCSHHHHHHHHTCCCC----CCSSCEEEE
T ss_pred ChHHHHHHHHHHHHHHHHHhCCCCCEEEECCCHHHHHHHHhcCcc----CCCCCEEEE
Confidence 344567778877777 56899999999999999999998542 234677664
No 20
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=96.22 E-value=0.0021 Score=55.18 Aligned_cols=47 Identities=15% Similarity=0.165 Sum_probs=34.0
Q ss_pred HHHHHHHHHHh----cCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec
Q 036939 32 LKKIAANKSVE----FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP 81 (215)
Q Consensus 32 ~K~~aA~~A~~----~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~ 81 (215)
.++.++++|++ .++++++|||++|+|...++++|.... ..+++++|+
T Consensus 38 ~~~~l~~~aA~~l~~~l~~~~viGla~G~T~~~~~~~l~~~~---~~~~v~~v~ 88 (255)
T 2okg_A 38 VKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDS---KNRELLFVP 88 (255)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEECCSHHHHHHHHHCCCCT---TCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEECCcHHHHHHHHhhcccc---CCCCCEEEE
Confidence 34555555554 668999999999999999999996421 234677765
No 21
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=96.19 E-value=0.0048 Score=53.21 Aligned_cols=46 Identities=17% Similarity=0.293 Sum_probs=35.0
Q ss_pred HHHHHHHHHHh----cCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec
Q 036939 32 LKKIAANKSVE----FVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP 81 (215)
Q Consensus 32 ~K~~aA~~A~~----~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~ 81 (215)
.++.++++|++ .++++++|||++|+|...++++|... ..+++++|+
T Consensus 39 ~~~~l~~~aA~~l~~~l~~~~viGla~G~T~~~~~~~l~~~----~~~~v~~v~ 88 (266)
T 2gnp_A 39 LSERISQVAAGVLRNLIDDNMKIGFSWGKSLSNLVDLIHSK----SVRNVHFYP 88 (266)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEEECCSHHHHHHHHHCCCC----CCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHhcccc----CCCCCEEEE
Confidence 45666666665 56899999999999999999999642 244677764
No 22
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=95.34 E-value=0.014 Score=54.57 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=42.4
Q ss_pred ccCCCCCCCCCHHH-HHH--HHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhcCCCCCEEEec
Q 036939 18 SSLSPTSVGLTQDE-LKK--IAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQGKLKNIVGIP 81 (215)
Q Consensus 18 ~~~~~~~~m~~~~~-~K~--~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~~~l~~i~~V~ 81 (215)
+|-..|-.||+..+ .|. .-|++|+++|++||+|++|++.- -..++++|.+|.+++++++++++.
T Consensus 7 ~~~~~~~~~m~~~~~y~~K~vsaeEAv~lIkdGdtV~~gG~~g~P~~L~~AL~~r~~~g~~~~ltl~~ 74 (455)
T 3qli_A 7 SSGLVPRGSMDIRALYDEKLTTPEEAVSSIASGSHLSMGMFAAEPPALLKALADRATRGDIGDLRVYY 74 (455)
T ss_dssp ---------CCHHHHHHHHBCCHHHHTTTCCTTCEEEECSGGGSCHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred ccCCCcCCccCHHHHHHhcCCCHHHHHHhCCCCCEEEECCcccCHHHHHHHHHHHHhhCCCcceEEEE
Confidence 44566777777443 333 34899999999999999998743 367999999887666788899875
No 23
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=95.14 E-value=0.017 Score=49.70 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHh----cCcCCCEEEeC-cChhHHHHHHHHHhHHhcCCCC-CEEEec
Q 036939 31 ELKKIAANKSVE----FVKSGMVVGLG-TDSTATHAVDKIGELLHQGKLK-NIVGIP 81 (215)
Q Consensus 31 ~~K~~aA~~A~~----~V~~g~vIGLG-sGSTv~~~i~~L~~~~~~~~l~-~i~~V~ 81 (215)
..++.++++|++ .++++++|||+ +|+|...++++|.+.-. .+ ++++|+
T Consensus 38 ~~~~~l~~~aA~~l~~~l~~~~viGla~~G~T~~~~~~~l~~~~~---~~~~v~~v~ 91 (264)
T 2r5f_A 38 SIKQAIGSAAAHYLETSLSAQDHIGISSWSSTIRAMVSHMHPQPG---KQSAQEVVQ 91 (264)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCEEEECTTCHHHHHHHHTCCC--C---CCCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEECcchHHHHHHHHhhccccC---CCCCcEEEE
Confidence 446667776666 55899999999 99999999999865311 13 566654
No 24
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=94.89 E-value=0.077 Score=47.37 Aligned_cols=82 Identities=17% Similarity=0.193 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhcCcCCCEE-EeCcChhHHHHHHHHHhHHhcCCCCCEEEe--cC-----cHHHHHHHHHCCCCeeecCC-
Q 036939 32 LKKIAANKSVEFVKSGMVV-GLGTDSTATHAVDKIGELLHQGKLKNIVGI--PT-----SKTTHDQAVSLGIPLSDLDS- 102 (215)
Q Consensus 32 ~K~~aA~~A~~~V~~g~vI-GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V--~t-----S~~t~~~~~~~Gi~v~~l~~- 102 (215)
.++++++.++++|++|.+| =.|..+|+..+++...++ |. .++++ -| ..+++..+.+.||++.-+.+
T Consensus 107 a~~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~---gk--~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Ds 181 (315)
T 3ecs_A 107 SRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAA---KK--RFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDA 181 (315)
T ss_dssp HHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTT---TC--CEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGG
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHc---CC--eEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehh
Confidence 4778999999999999854 568889999998876542 32 34443 22 34567778888999764322
Q ss_pred -----CCceeEEEecCCcccC
Q 036939 103 -----HPVIDLAIDGADEVDP 118 (215)
Q Consensus 103 -----~~~iDl~iDGaDeVd~ 118 (215)
..++|..|-|||.|..
T Consensus 182 a~~~~m~~vd~VivGAd~i~~ 202 (315)
T 3ecs_A 182 AVGYIMEKADLVIVGAEGVVE 202 (315)
T ss_dssp GHHHHGGGCSEEEEECSEECT
T ss_pred HHHHHHHhCCEEEECceEEec
Confidence 1379999999999975
No 25
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=94.31 E-value=0.055 Score=45.43 Aligned_cols=45 Identities=18% Similarity=0.324 Sum_probs=36.0
Q ss_pred HHHHHHhcCcCCCEEEeCcC---hhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 36 AANKSVEFVKSGMVVGLGTD---STATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 36 aA~~A~~~V~~g~vIGLGsG---STv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
-+++|+++|+|||+|++|+. .+-..++++|.++ +++++++++++.
T Consensus 7 sa~eAv~~IkdG~tv~~ggf~~~g~P~~l~~aL~~~----~~~dLtl~~~~~ 54 (220)
T 1k6d_A 7 TLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLES----GVRDLTLIANDT 54 (220)
T ss_dssp CHHHHGGGCCTTCEEEECCBTTBTCCHHHHHHHHHH----TCCSEEEECSBC
T ss_pred CHHHHHhhCCCCCEEEECCccccCCHHHHHHHHHHC----CCCCEEEEEecC
Confidence 36789999999999999874 3467888999876 366999998754
No 26
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=94.01 E-value=0.061 Score=45.93 Aligned_cols=44 Identities=9% Similarity=0.209 Sum_probs=35.7
Q ss_pred HHHHHHhcCcCCCEEEeCcC---hhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 36 AANKSVEFVKSGMVVGLGTD---STATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 36 aA~~A~~~V~~g~vIGLGsG---STv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
-+++|+++|+|||+|++|+- .+-..++++|.++ +++++++++++
T Consensus 10 sa~eAv~~IkdG~tV~~ggf~~~g~P~~li~aL~~~----~~~dLtl~~~~ 56 (241)
T 3cdk_A 10 SSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQ----GVKDLTVVSNN 56 (241)
T ss_dssp CHHHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHH----TCCSEEEEESS
T ss_pred CHHHHHhhCCCCCEEEECCcCccCcHHHHHHHHHHc----CCCCEEEEEec
Confidence 36788899999999999873 3677889999876 36799998864
No 27
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=93.49 E-value=0.062 Score=49.55 Aligned_cols=38 Identities=13% Similarity=0.269 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.+.++++|+.|++++++|+++-+|.|++-..+++.|.+
T Consensus 193 ~~~~~~Ia~~~a~~i~dg~~lqlGiG~ip~av~~~l~~ 230 (439)
T 3d3u_A 193 SDLELRIGQNCASLIKDGDTLQLGIGGIPDAVLRALEG 230 (439)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEECSSHHHHHHHHTTTT
T ss_pred ChHHHHHHHHHHHhcCCCCEEEeccchHHHHHHHHHhh
Confidence 47799999999999999999999999999888888865
No 28
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=93.46 E-value=0.67 Score=41.51 Aligned_cols=84 Identities=20% Similarity=0.192 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhcCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecC-----cHHHHHHHHHCCCCeeecC----
Q 036939 32 LKKIAANKSVEFVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPT-----SKTTHDQAVSLGIPLSDLD---- 101 (215)
Q Consensus 32 ~K~~aA~~A~~~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~t-----S~~t~~~~~~~Gi~v~~l~---- 101 (215)
..+++++.++++|++|.+ +-.|..+|+..+++...++ |..-.+.+.-| ...|+..+.+.||++.-+.
T Consensus 127 ~~~~I~~~g~~~I~~g~~ILTh~~S~tvl~~l~~A~~~---gk~~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~Dsa~ 203 (338)
T 3a11_A 127 ALERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQ---GKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVDSAA 203 (338)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECSCCHHHHHHHHHHHHT---TCCCEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHHHC---CCeEEEEEeCCCCchhhHHHHHHHHhCCCCEEEEehHHH
Confidence 456789999999999985 4568888999988877543 32212333322 2467888899999966322
Q ss_pred --CCCceeEEEecCCcccC
Q 036939 102 --SHPVIDLAIDGADEVDP 118 (215)
Q Consensus 102 --~~~~iDl~iDGaDeVd~ 118 (215)
-..++|..|-|||.|-.
T Consensus 204 ~~~M~~Vd~VivGAd~V~a 222 (338)
T 3a11_A 204 RHYMKMTDKVVMGADSITV 222 (338)
T ss_dssp TTTGGGCSEEEECCSEECT
T ss_pred HHHHHhCCEEEECccEEec
Confidence 12579999999999965
No 29
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=93.26 E-value=0.18 Score=45.58 Aligned_cols=97 Identities=23% Similarity=0.203 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhcCcCCCEEEe----------CcChhHHHHHHHHHhHHhcCCCCCEEEecCc------HHHHHHHHHCCC
Q 036939 32 LKKIAANKSVEFVKSGMVVGL----------GTDSTATHAVDKIGELLHQGKLKNIVGIPTS------KTTHDQAVSLGI 95 (215)
Q Consensus 32 ~K~~aA~~A~~~V~~g~vIGL----------GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS------~~t~~~~~~~Gi 95 (215)
..+++++.++++|++|.+|=- |.| |+..+++...+ +|..-.+.+.-|- ..|+..+.+.||
T Consensus 132 ~~~~I~~~g~~~I~~g~~ILThcnsg~lat~g~g-tal~~l~~A~~---~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI 207 (351)
T 1t5o_A 132 RNRKMGEYGAELLEDGDVVLTYCNAGRLATVDWG-TALGVVRSAVE---QGKEIRVIACETRPLNQGSRLTCWELMEDGI 207 (351)
T ss_dssp HHHHHHHHHHTTCCTTCEEEECSCCSSSSSSSSC-SHHHHHHHHHH---TTCCCEEEEECCTTTTHHHHTHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccccccCCC-hHHHHHHHHHH---CCCEEEEEEeCCCcccccHHHHHHHHHhCCC
Confidence 456688899999999998765 344 67777776654 2322123333221 236788899999
Q ss_pred CeeecCC--------CCceeEEEecCCcccC-----------------CCCeeEEEccccHH
Q 036939 96 PLSDLDS--------HPVIDLAIDGADEVDP-----------------GLAVPVEVVPVCWK 132 (215)
Q Consensus 96 ~v~~l~~--------~~~iDl~iDGaDeVd~-----------------K~plPVEV~P~a~~ 132 (215)
++.-+.+ -..+|..|-|||.|-. .+.+|+=|.-..++
T Consensus 208 ~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNGv~NKiGT~~lAl~Ak~~~vPfyV~a~~~k 269 (351)
T 1t5o_A 208 DVTLITDSMVGIVMQKGMVDKVIVGADRIVRDAVFNKIGTYTVSVVAKHHNIPFYVAAPKAT 269 (351)
T ss_dssp CEEEECGGGHHHHHHTTCCSEEEECCSEEETTEEEEETTHHHHHHHHHHTTCCEEEECCGGG
T ss_pred CEEEEehhHHHHHhhcCCCCEEEECccchhhcCcccccCHHHHHHHHHHcCCCEEEeCccce
Confidence 9763321 1249999999999953 14677777644443
No 30
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=92.90 E-value=0.1 Score=44.56 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=35.3
Q ss_pred HHHHHHhcCcCCCEEEeCc--C-hhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 36 AANKSVEFVKSGMVVGLGT--D-STATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 36 aA~~A~~~V~~g~vIGLGs--G-STv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
-+++|+++|+|||+|++|+ | .+-..++++|.++ +.++++++++|
T Consensus 10 sa~eAv~~IkdG~tV~~gGf~~~g~P~~li~aL~~~----~~kdLtli~~~ 56 (235)
T 3rrl_A 10 DLDKALSALKDGDTILVGGFGLCGIPEYAIDYIYKK----GIKDLIVVSNN 56 (235)
T ss_dssp STHHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHH----TCCSEEEECSC
T ss_pred CHHHHHhhCCCCCEEEECCcCccCCHHHHHHHHHhc----CCCcEEEEEcC
Confidence 4678889999999999996 2 3567889999875 25699999885
No 31
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=92.84 E-value=0.048 Score=51.75 Aligned_cols=62 Identities=11% Similarity=0.207 Sum_probs=45.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCcCCCEEEeCc---C-hhHHHHHHHHHhHHh-cCCCCCEEEecCcH
Q 036939 20 LSPTSVGLTQDELKKIAANKSVEFVKSGMVVGLGT---D-STATHAVDKIGELLH-QGKLKNIVGIPTSK 84 (215)
Q Consensus 20 ~~~~~~m~~~~~~K~~aA~~A~~~V~~g~vIGLGs---G-STv~~~i~~L~~~~~-~~~l~~i~~V~tS~ 84 (215)
+.+|..|+. .|..-+++|+++|+|||+|++|+ + .+-..++++|.++.. +++.+++++++++.
T Consensus 4 ~~~~~~~~~---~K~~sa~eAv~~IkdG~tV~~gGf~~~~g~P~~li~aL~~~~~~~~~~~dLtlv~~~~ 70 (531)
T 2ahu_A 4 VKPPRINGR---VPVLSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTPRNLSIISPTG 70 (531)
T ss_dssp CCCCCBTTB---CCBCCHHHHHTTCCTTCEEEECCCBTTTTCCHHHHHHHHHHHHHHCCSCSEEEEESSC
T ss_pred CCChhhcCC---CccCCHHHHHhhCCCCCEEEECCcccccCcHHHHHHHHHHhHHhcCCCCCeEEEEecc
Confidence 566777652 25556789999999999999986 2 346788899987643 35677999997653
No 32
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=92.58 E-value=0.24 Score=45.20 Aligned_cols=84 Identities=18% Similarity=0.147 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCcCCCEEEe----------CcChhHHHHHHHHHhHHhcCCCCCEEEecCc------HHHHHHHHHCC
Q 036939 31 ELKKIAANKSVEFVKSGMVVGL----------GTDSTATHAVDKIGELLHQGKLKNIVGIPTS------KTTHDQAVSLG 94 (215)
Q Consensus 31 ~~K~~aA~~A~~~V~~g~vIGL----------GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS------~~t~~~~~~~G 94 (215)
+..+++++.++++|++|.+|=- |.| |+..+++...+ +|..-.+.+.-|- ..|+..+.+.|
T Consensus 158 ~~~~~I~~~g~~~I~~g~~ILThcnsg~Lat~g~g-Tal~~l~~A~~---~gk~~~V~v~EtRP~~qG~rltA~eL~~~G 233 (374)
T 2yvk_A 158 ETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYG-TALAPFYLAKQ---KDLGLHIYACETRPVLQGSRLTAWELMQGG 233 (374)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSSSC-STTHHHHHHHH---TTCCCEEEEECCTTTTHHHHTHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCCccccCCCc-HHHHHHHHHHH---cCCEEEEEEeCCCCccccHHHHHHHHHHcC
Confidence 3456688999999999998765 334 67777777654 3322123333221 23778889999
Q ss_pred CCeeecCCC--------CceeEEEecCCcccC
Q 036939 95 IPLSDLDSH--------PVIDLAIDGADEVDP 118 (215)
Q Consensus 95 i~v~~l~~~--------~~iDl~iDGaDeVd~ 118 (215)
|++.-+.+- ..+|..|-|||.|-.
T Consensus 234 IpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~a 265 (374)
T 2yvk_A 234 IDVTLITDSMAAHTMKEKQISAVIVGADRIAK 265 (374)
T ss_dssp CEEEEECGGGHHHHHHHTTCCEEEECCSEEET
T ss_pred CCEEEEehhHHHHHhhhcCCCEEEECccEEec
Confidence 996633211 249999999999954
No 33
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=92.09 E-value=0.12 Score=48.93 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=39.6
Q ss_pred HHHHHHhc--CcCCCEEEeCcCh-hHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 36 AANKSVEF--VKSGMVVGLGTDS-TATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 36 aA~~A~~~--V~~g~vIGLGsGS-Tv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
-+++|+++ |+|||+|++|++. +-..++++|.+|.++.++++++++++|.
T Consensus 48 SaeEAv~~~~IkdG~tV~~gg~~G~P~~Li~AL~~r~~~~g~kdLtli~~s~ 99 (509)
T 1xr4_A 48 SLEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSL 99 (509)
T ss_dssp SHHHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHTTCCSEEEEESCC
T ss_pred CHHHHhcCCCCCCcCEEEECCccCCHHHHHHHHHHHHHhcCCcceEEEecCC
Confidence 48899998 9999999999764 5567888988887755578999997644
No 34
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=91.58 E-value=0.1 Score=48.05 Aligned_cols=48 Identities=21% Similarity=0.255 Sum_probs=38.7
Q ss_pred HHHHHHHHH-hcCcCCCEEEeCcCh-hHHHHHHHHHhHHhcCCCCCEEEecC
Q 036939 33 KKIAANKSV-EFVKSGMVVGLGTDS-TATHAVDKIGELLHQGKLKNIVGIPT 82 (215)
Q Consensus 33 K~~aA~~A~-~~V~~g~vIGLGsGS-Tv~~~i~~L~~~~~~~~l~~i~~V~t 82 (215)
|..-+++|+ ++|+|||+|++|++. +-..++++|.++.. ++++++++++
T Consensus 10 K~~sa~eAv~~~IkdG~tV~~ggf~g~P~~Li~AL~~~~~--~~~dLtli~~ 59 (439)
T 3d3u_A 10 RVCSADEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQRE--KLENITVFHM 59 (439)
T ss_dssp HBCCHHHHHHHHCCTTCEEEECCBTTCCHHHHHHHHHTTT--TCCSEEEECS
T ss_pred CCCcHHHHHHhhCCCcCEEEECcccChHHHHHHHHHHhhC--CCCCEEEEEe
Confidence 444578899 999999999999985 66789999987643 3678999876
No 35
>1poi_A Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.2
Probab=91.40 E-value=0.18 Score=44.58 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=33.3
Q ss_pred HHHHH-hcCcCCCEEEeCc---ChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 37 ANKSV-EFVKSGMVVGLGT---DSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 37 A~~A~-~~V~~g~vIGLGs---GSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
+++|+ ++|+|||+|++|+ -.+-..++++|.++ +.+++++++++
T Consensus 6 a~eAv~~~IkdG~tV~~gGf~~~g~P~~li~aL~~~----~~~dLtlv~~~ 52 (317)
T 1poi_A 6 LKDAIAKYVHSGDHIALGGFTTDRKPYAAVFEILRQ----GITDLTGLGGA 52 (317)
T ss_dssp HHHHHHHHCCTTCEEEECSBTTBSCCHHHHHHHHHT----TCCCEEEECSE
T ss_pred HHHHHHhhCCCCCEEEECCccccCcHHHHHHHHHhC----CCCCEEEEEEC
Confidence 46777 8999999999986 33467888888763 36799999654
No 36
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=91.31 E-value=0.5 Score=43.18 Aligned_cols=81 Identities=17% Similarity=0.078 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcCc--------CCCEEEe----------CcChhHHHHHHHHHhHHhcCCCCCEEEecC-------c-HH
Q 036939 32 LKKIAANKSVEFVK--------SGMVVGL----------GTDSTATHAVDKIGELLHQGKLKNIVGIPT-------S-KT 85 (215)
Q Consensus 32 ~K~~aA~~A~~~V~--------~g~vIGL----------GsGSTv~~~i~~L~~~~~~~~l~~i~~V~t-------S-~~ 85 (215)
..+++++.++++|+ +|.+|=- |.| |+..+++...++ |. .++++.+ . ..
T Consensus 155 ~~~~I~~~g~~~I~~~~~~~~~~g~~ILThcnsg~Lat~g~g-Tal~~l~~A~~~---gk--~~~V~v~EtRP~~qGarl 228 (383)
T 2a0u_A 155 FNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYG-TALGVVRQLFYD---GK--LERVYACETRPWNQGARL 228 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSEEEEECSCCSTTTSSSSC-SHHHHHHHHHHT---TC--EEEEEEECCTTTTHHHHT
T ss_pred HHHHHHHHHHHHhhhhccccCCCCCEEEEecCCcchhcCCCc-hHHHHHHHHHHc---CC--eEEEEEeCCCCccchHHH
Confidence 45668889999998 8987654 344 788888776542 32 3444322 1 24
Q ss_pred HHHHHHHCCCCeeecCCC--------CceeEEEecCCcccC
Q 036939 86 THDQAVSLGIPLSDLDSH--------PVIDLAIDGADEVDP 118 (215)
Q Consensus 86 t~~~~~~~Gi~v~~l~~~--------~~iDl~iDGaDeVd~ 118 (215)
|+..+.+.||++.-+.+- ..+|..|-|||.|-.
T Consensus 229 tA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~a 269 (383)
T 2a0u_A 229 TVYECVQEDIPCTLICDGAASSLMLNRKIDAVVVGADRICQ 269 (383)
T ss_dssp HHHHHHHTTCCEEEECGGGHHHHHHHSCCCEEEECCSEECT
T ss_pred HHHHHHHcCCCEEEEehhHHHHHhhcCCCCEEEECccEEec
Confidence 788889999997633211 249999999999965
No 37
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=90.10 E-value=0.4 Score=40.57 Aligned_cols=52 Identities=25% Similarity=0.388 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhcCcC-------CCEEEeCcChhHHHHHHHHHhHHhcCC--CCCEEEe
Q 036939 29 QDELKKIAANKSVEFVKS-------GMVVGLGTDSTATHAVDKIGELLHQGK--LKNIVGI 80 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~-------g~vIGLGsGSTv~~~i~~L~~~~~~~~--l~~i~~V 80 (215)
.+++=+.+|+.-.+.+++ +.+|||++|||...+.+.|.+..+++. .++++++
T Consensus 9 ~~~l~~~aA~~l~~~l~~~~~~~~~~~~i~lsgGsTp~~~~~~L~~~~~~~~~~~~~v~v~ 69 (266)
T 1fs5_A 9 AEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTF 69 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccCceEEEEcCCCCHHHHHHHHHHHhhcCCCChHHeEEE
Confidence 344445555555554544 789999999999999999986533332 2356554
No 38
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=89.98 E-value=0.4 Score=39.77 Aligned_cols=40 Identities=30% Similarity=0.413 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhcCc--CCCEEEeCcChhHHHHHHHHHhH
Q 036939 29 QDELKKIAANKSVEFVK--SGMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~--~g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
.+++=+.+|+.-.+.++ ++.+|||++|||...+.+.|.+.
T Consensus 9 ~~~l~~~aA~~l~~~i~~~~~~~i~lsgG~T~~~~~~~L~~~ 50 (242)
T 2bkx_A 9 YEELSQIAARITADTIKEKPDAVLGLATGGTPEGTYRQLIRL 50 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEECCSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCeEEEECCCCCHHHHHHHHHHH
Confidence 34444455555555555 46899999999999999999854
No 39
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=89.09 E-value=0.83 Score=41.12 Aligned_cols=83 Identities=22% Similarity=0.274 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhcCcCCCEEEe-C-cCh-------hHHHHHHHHHhHHhcCCCCCEEEecC-------c-HHHHHHHHHC
Q 036939 31 ELKKIAANKSVEFVKSGMVVGL-G-TDS-------TATHAVDKIGELLHQGKLKNIVGIPT-------S-KTTHDQAVSL 93 (215)
Q Consensus 31 ~~K~~aA~~A~~~V~~g~vIGL-G-sGS-------Tv~~~i~~L~~~~~~~~l~~i~~V~t-------S-~~t~~~~~~~ 93 (215)
+..+++++.++++|++|.+|=- + ||+ |+..+++...+ +|. .++++.+ . ..|+..+.+.
T Consensus 133 ~~~~~I~~~g~~~I~~g~~ILThcns~~lat~~~gtvl~~l~~A~~---~gk--~~~V~v~EtRP~~qG~rlta~eL~~~ 207 (347)
T 1t9k_A 133 EVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVE---SGK--RIRVFADETRPYLQGARLTAWELMKD 207 (347)
T ss_dssp HHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHH---TTC--CEEEEEECCTTTTHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCCccccCCccHHHHHHHHHHH---CCC--eEEEEEeCCCCccccHHHHHHHHHhC
Confidence 3567789999999999987654 3 332 88888887654 232 3444322 1 2367888999
Q ss_pred CCCeeecCC--------CCceeEEEecCCcccC
Q 036939 94 GIPLSDLDS--------HPVIDLAIDGADEVDP 118 (215)
Q Consensus 94 Gi~v~~l~~--------~~~iDl~iDGaDeVd~ 118 (215)
||++.-+.+ ...+|..|-|||.|-.
T Consensus 208 GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~a 240 (347)
T 1t9k_A 208 GIEVYVITDNMAGWLMKRGLIDAVVVGADRIAL 240 (347)
T ss_dssp TCEEEEECGGGHHHHHHTTCCSEEEECCSEEET
T ss_pred CCCEEEEehhHHHHHhhcCCCCEEEECccEEec
Confidence 999663321 1249999999999954
No 40
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=88.46 E-value=0.75 Score=39.69 Aligned_cols=52 Identities=23% Similarity=0.220 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhcCcC------C-CEEEeCcChhHHHHHHHHHhHHhcCCC--CCEEEe
Q 036939 29 QDELKKIAANKSVEFVKS------G-MVVGLGTDSTATHAVDKIGELLHQGKL--KNIVGI 80 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~------g-~vIGLGsGSTv~~~i~~L~~~~~~~~l--~~i~~V 80 (215)
.+++=+.+|+.-.+.+++ | .+|||++|||...+.+.|.+..+++.+ ++++++
T Consensus 9 ~~~la~~aA~~i~~~i~~~~~~~~~~~~lglsgGsTp~~~~~~L~~~~~~~~i~~~~v~v~ 69 (289)
T 1ne7_A 9 YSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTF 69 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHHHHHHHHHHHHHHHTTSCCCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCEEEEEcCCccHHHHHHHHHhhhhccCCCchheEEE
Confidence 344445555555444443 5 799999999999999999865433333 355543
No 41
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=87.58 E-value=0.65 Score=42.81 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=35.4
Q ss_pred HHHHHHhcCcCCCEEEeCcCh-hHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 36 AANKSVEFVKSGMVVGLGTDS-TATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 36 aA~~A~~~V~~g~vIGLGsGS-Tv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
-+++|+++|+|||+|++|++. +-..++++|.++.++ ++++++++.+
T Consensus 8 saeeAv~~IkdG~tI~~ggf~g~P~~Li~AL~~r~~~--~kdLtl~~~~ 54 (436)
T 2oas_A 8 SALEAVSLIRSGETLWTHSMGATPKVLLDALAKHALT--LDNITLLQLH 54 (436)
T ss_dssp SHHHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGG--CCSEEEEESS
T ss_pred cHHHHHhhCCCCCEEEECCccCcHHHHHHHHHHhhcc--CCCEEEEEec
Confidence 367899999999999999662 246788999887532 5689998743
No 42
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=87.36 E-value=0.82 Score=37.74 Aligned_cols=39 Identities=28% Similarity=0.259 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhcCc-CCCEEEeCcChhHHHHHHHHHh
Q 036939 29 QDELKKIAANKSVEFVK-SGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~-~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.+++=+.+|+.-.+.++ .+++|||++|||...+.+.|.+
T Consensus 10 ~~~l~~~aA~~l~~~i~~~~~~i~ls~G~T~~~~~~~L~~ 49 (234)
T 2ri0_A 10 KTEGSKVAFRMLEEEITFGAKTLGLATGSTPLELYKEIRE 49 (234)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCCCCHHHHHHHHHh
Confidence 34444555555555555 4579999999999999999974
No 43
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=86.52 E-value=0.86 Score=43.08 Aligned_cols=48 Identities=23% Similarity=0.402 Sum_probs=34.6
Q ss_pred HHH-HHHHHHhc--CcCCCEEEeCcCh-----hHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 33 KKI-AANKSVEF--VKSGMVVGLGTDS-----TATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 33 K~~-aA~~A~~~--V~~g~vIGLGsGS-----Tv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
|.. -|++|+++ |+|||+|++|+.. .+..++++|+++ ++++++++++|.
T Consensus 47 Kv~~saeEAv~~~~IkdG~tV~~gGf~g~P~~l~~~Li~AL~~r----~~kdLtli~~s~ 102 (519)
T 2hj0_A 47 KLLSSIHEAIEKTRLKDGMTISFHHHFREGDYVMNMVLDEIAKM----GIKDISIAPSSI 102 (519)
T ss_dssp CEESCHHHHHHHTTCCTTCEEEECCTTGGGBCHHHHHHHHHHHT----TCCSEEEEESCC
T ss_pred eEeCCHHHHHhcCCCCCCCEEEECCccCCchHHHHHHHHHHHhc----CCCCeEEEeecC
Confidence 444 57888898 9999999999762 233556666654 466899998754
No 44
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=85.40 E-value=2 Score=31.63 Aligned_cols=70 Identities=10% Similarity=0.152 Sum_probs=51.5
Q ss_pred eeEEEccccHHHHHHHHhcchhcCCCceeecceeEec-CCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeecccccc
Q 036939 122 VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRTCYEKH-NGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMFLDMAT 200 (215)
Q Consensus 122 lPVEV~P~a~~~v~~~l~~l~~~~G~~~~lR~p~vTD-nGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF~~~a~ 200 (215)
+=|.+.|.....|.++|.++ .|++. ...+. .|.+|+=+--.+ ..+..+.-++++++ |||..+.|-+...+
T Consensus 10 lvV~~~p~~~~~V~~~L~~i---pgvEi----~~~~~~~GkiVV~iEa~~-~~~l~~~i~~I~~i-~GVlst~lvy~~~e 80 (95)
T 2jsx_A 10 LVVQAKSERISDISTQLNAF---PGCEV----AVSDAPSGQLIVVVEAED-SETLIQTIESVRNV-EGVLAVSLVYHQQE 80 (95)
T ss_dssp EEEEECTTSHHHHHHHHTTS---TTEEE----EEEETTTTEEEEEEEESS-HHHHHHHHHHHTTS-TTEEEEEESSCCCC
T ss_pred EEEEECCCCHHHHHHHHHCC---CCeEE----EEecCCCCCEEEEEEeCC-HHHHHHHHHHHhcC-CCccEEeEEEEEec
Confidence 55778899999999999998 35542 24444 798887665443 44555555789999 99999999876543
No 45
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=85.03 E-value=1 Score=31.25 Aligned_cols=60 Identities=5% Similarity=0.062 Sum_probs=43.2
Q ss_pred EEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHHH-HHccccCeEEee
Q 036939 124 VEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVASN-RILRLIAGVVEH 192 (215)
Q Consensus 124 VEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~~-~L~~i~pGVVe~ 192 (215)
|.+.|.....+.++|.++ |+++. -.+|-..+|++-+.+.+ ..+.+++-. .|..+ |||..+
T Consensus 8 v~~~~~~~~~~~~~l~~~-------peV~e~~~vtG~~D~ll~v~~~d-~~~l~~~i~~~l~~~-~gV~~~ 69 (83)
T 2cvi_A 8 MVTAAGKEREVMEKLLAM-------PEVKEAYVVYGEYDLIVKVETDT-LKDLDQFITEKIRKM-PEIQMT 69 (83)
T ss_dssp EEECTTCHHHHHHHHHTS-------TTEEEEEECBSSCSEEEEEEESS-HHHHHHHHHTTGGGC-TTEEEE
T ss_pred EEEcCCCHHHHHHHHhCC-------CCeeEEEEEcccCCEEEEEEECC-HHHHHHHHHHHhccC-CCEeEE
Confidence 556677778888888876 44554 57788889999999865 555555443 66788 999765
No 46
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=83.17 E-value=1.6 Score=29.70 Aligned_cols=61 Identities=8% Similarity=0.005 Sum_probs=42.7
Q ss_pred EEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeee
Q 036939 124 VEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHG 193 (215)
Q Consensus 124 VEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~G 193 (215)
|.+.|.....+.+.|.++ |+++. -.+|-..++++-+.+.+ ..+.+++- +.|..+ |||..+-
T Consensus 8 v~~~~~~~~~~~~~l~~~-------peV~~~~~vtG~~d~l~~v~~~d-~~~l~~~~~~~l~~~-~gV~~~~ 70 (83)
T 2zbc_A 8 INTDAGGEDEVFERLKSM-------SEVTEVHVVYGVYDIVVKVEADS-MDKLKDFVTNTIRKL-PKVRSTL 70 (83)
T ss_dssp EEESTTCHHHHHHHHTTC-------TTEEEEEECSSSCSEEEEEECSS-HHHHHHHHHHTGGGS-TTEEEEE
T ss_pred EEEcCCCHHHHHHHHhCC-------CCeEEEEEEeccCCEEEEEEECC-HHHHHHHHHHHhcCC-CCEeEEE
Confidence 566677778888888775 34554 56777779999999875 45555544 367788 9997653
No 47
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=83.14 E-value=0.55 Score=44.22 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=64.8
Q ss_pred HHHHHHhcCcCCCEEEeCcC---hhHHHHHHHHHhHHhc----C-CCCCEEEecC-cHH--HH-HHHHHCCCCeeecCCC
Q 036939 36 AANKSVEFVKSGMVVGLGTD---STATHAVDKIGELLHQ----G-KLKNIVGIPT-SKT--TH-DQAVSLGIPLSDLDSH 103 (215)
Q Consensus 36 aA~~A~~~V~~g~vIGLGsG---STv~~~i~~L~~~~~~----~-~l~~i~~V~t-S~~--t~-~~~~~~Gi~v~~l~~~ 103 (215)
-+++|+++|+|||+|++|+. .+-..++++|.++.++ | .+ ++++++. |.. .. .+++.-.++...-
T Consensus 7 SaeEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~~~~g~~~-~Ltl~~~~s~g~~~~~~l~~~g~v~~~~~--- 82 (506)
T 2nvv_A 7 TAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPF-KIGMFTGASTGARLDGVLAQADAVKFRTP--- 82 (506)
T ss_dssp CHHHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCC-CEEEECSSCCCTTTHHHHHHTTCEEEEES---
T ss_pred cHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhHHhhccccCCc-eEEEEEecCCCcchhHHhccCCceEEEee---
Confidence 46788899999999999964 3455778888877553 2 23 6888774 221 11 3333222322110
Q ss_pred CceeEEEecCCcccCCC---CeeEEEccccHHHHHHHHhcchhcCC-Cc-eeecceeEecCCCEEEee
Q 036939 104 PVIDLAIDGADEVDPGL---AVPVEVVPVCWKFTANRFPDLFKDCG-CV-AKLRTCYEKHNGNCIIDL 166 (215)
Q Consensus 104 ~~iDl~iDGaDeVd~K~---plPVEV~P~a~~~v~~~l~~l~~~~G-~~-~~lR~p~vTDnGN~IlD~ 166 (215)
-+.+.-..|. .- ++..|..+..+.+.+++-+ .+ .+ +-++-.-.+.+||+.+-.
T Consensus 83 -------~~~~~~~r~~i~~G~-i~~~P~~ls~v~~~l~~~~--l~~~DVAlI~as~aDe~Gnls~~~ 140 (506)
T 2nvv_A 83 -------YQSNKDLRNLINNGS-TSYFDLHLSTLAQDLRYGF--YGKVDVAIIEVADVTEDGKILPTT 140 (506)
T ss_dssp -------CCCCHHHHHHHHTTS-SEECCCCGGGHHHHHHTTS--SCCCCEEEEEESEECTTSEEECCS
T ss_pred -------eCCCHHHHHHHHcCC-CeEeCCCcccHHHHHHcCC--cCCCCEEEEEecccCCCceEEEeC
Confidence 0111111100 00 4777888888877776521 11 22 223445678899988754
No 48
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=83.09 E-value=4.5 Score=38.04 Aligned_cols=89 Identities=12% Similarity=0.149 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhcC------cCCCEEEeCcChhHHHHHHHHHhH----------------------HhcCCCCCE-EEe
Q 036939 30 DELKKIAANKSVEFV------KSGMVVGLGTDSTATHAVDKIGEL----------------------LHQGKLKNI-VGI 80 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V------~~g~vIGLGsGSTv~~~i~~L~~~----------------------~~~~~l~~i-~~V 80 (215)
++.++++|+.|++++ ++|+++=+|-|+.-..+...|.+. ++.|.+... ...
T Consensus 247 ~~~~~~IA~~~a~~i~~~g~~~dG~~lqlGIG~ip~aV~~~l~~~~~~l~i~se~g~~g~~d~~~~l~e~G~i~~~~~~~ 326 (509)
T 1xr4_A 247 NPRELLIARQAANVIEHSGYFCDGFSLQTGTGGASLAVTRFLEDKMRRHNITASFGLGGITGTMVDLHEKGLIKALLDTQ 326 (509)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCSTTEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEECHHHHHHHHTTSBSCEEEEE
T ss_pred ChHHHHHHHHHHHHHHhcCcCCCCCEEEeccChHHHHHHHHhhhhcccceeecccccCCcCCccHhHHhCCCccCCccee
Confidence 366889999999999 999999999998777777777765 233433322 233
Q ss_pred cCcHHHHHHHHHC-C-CCee------ec---CCCCceeEEEecCCcccC
Q 036939 81 PTSKTTHDQAVSL-G-IPLS------DL---DSHPVIDLAIDGADEVDP 118 (215)
Q Consensus 81 ~tS~~t~~~~~~~-G-i~v~------~l---~~~~~iDl~iDGaDeVd~ 118 (215)
+-..-+...+... + +.+. +. ....++|++|-||=|||.
T Consensus 327 ~f~~g~~~~~~~n~~~~~~~~~~~~n~~~~~~~~~~ldiai~galevD~ 375 (509)
T 1xr4_A 327 SFDGDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVMLSALEIDV 375 (509)
T ss_dssp ECSHHHHHHHHHCTTEEECCHHHHTCTTCSCCGGGGCSEEEECCSEECT
T ss_pred EeeccHHHHHHhCCcceEEeccccccCcchhhhhcCCCeEEeeeEEEcc
Confidence 3344443333222 2 1211 01 234578999999999997
No 49
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=82.93 E-value=1.1 Score=42.21 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=64.4
Q ss_pred HHHHHHHHHhcCcCCCEEEeCcC---hhHHHHHHHHHhHHhcCCCCCEEEecC-cH--HHH-HHHHHCCCCeeecCCCCc
Q 036939 33 KKIAANKSVEFVKSGMVVGLGTD---STATHAVDKIGELLHQGKLKNIVGIPT-SK--TTH-DQAVSLGIPLSDLDSHPV 105 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~vIGLGsG---STv~~~i~~L~~~~~~~~l~~i~~V~t-S~--~t~-~~~~~~Gi~v~~l~~~~~ 105 (215)
|..-+++|+++|+|||+|++|+. .+-..++++|.++.++..+ .+++++. |. ... .+++.-.++....
T Consensus 14 Kv~saeEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~dl-~Ltl~~~~~~g~~~~~~l~~~g~v~~~~~----- 87 (497)
T 2g39_A 14 KVMSAAEAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKERPL-RISLMTGASLGNDLDKQLTEAGVLARRMP----- 87 (497)
T ss_dssp GBCCHHHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHSCC-CEEEECSSCCCTTHHHHHHHTTCEEEEES-----
T ss_pred ccCcHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhhhcCCc-eEEEEecccccccchHHHhcCCceEEEEe-----
Confidence 44457888999999999999964 3456788888877553233 3888774 22 112 3333222322110
Q ss_pred eeEEEecCCcccCCC---CeeEEEccccHHHHHHHHhcchhcCC-Cc-eeecceeEecCCCEEEee
Q 036939 106 IDLAIDGADEVDPGL---AVPVEVVPVCWKFTANRFPDLFKDCG-CV-AKLRTCYEKHNGNCIIDL 166 (215)
Q Consensus 106 iDl~iDGaDeVd~K~---plPVEV~P~a~~~v~~~l~~l~~~~G-~~-~~lR~p~vTDnGN~IlD~ 166 (215)
+ +.+.-..|. .- ++.+|..+..+.+.+++-+ .+ .+ +-++-.-.+.+||+.+-.
T Consensus 88 ----~-~~~~~~r~~i~~G~-v~fvP~~ls~~~~~l~~~~--l~~~DVAlI~as~aDe~Gnls~~~ 145 (497)
T 2g39_A 88 ----F-QVDSTLRKAINAGE-VMFIDQHLSETVEQLRNHQ--LKLPDIAVIEAAAITEQGHIVPTT 145 (497)
T ss_dssp ----C-CCCHHHHHHHHTTS-SEECCCCTTTHHHHHHTTS--SCCCSEEEEEESEECTTSCEECCS
T ss_pred ----e-CCCHHHHHHHHcCC-CeEECCccccHHHHHHcCC--cCCCCEEEEEecccCCCceEEEeC
Confidence 0 111111000 00 4666777776666665411 11 22 223445677889988753
No 50
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=81.40 E-value=1.8 Score=40.18 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=37.3
Q ss_pred HHHHHHHHHhcCcCCCEEEeCcCh-hHHHHHHHHHhHHhcCCCCCEEEecC
Q 036939 33 KKIAANKSVEFVKSGMVVGLGTDS-TATHAVDKIGELLHQGKLKNIVGIPT 82 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~vIGLGsGS-Tv~~~i~~L~~~~~~~~l~~i~~V~t 82 (215)
|..-+++|+++|++||+|++|++. +-..+.++|+++.++ ++++++++.
T Consensus 10 Kl~saeeA~~~ik~G~~v~~~~~~~~p~~l~~al~~~~~~--l~~v~l~~~ 58 (448)
T 3gk7_A 10 RTCTADEAVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAA--YKNVTVSHM 58 (448)
T ss_dssp TBCCHHHHGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGG--CSSEEEEES
T ss_pred cCCCHHHHHHhCCCcCEEEECCCCCCHHHHHHHHHHHHHh--hcCeEEEEe
Confidence 334578999999999999999764 346788999887553 678888765
No 51
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=80.72 E-value=2 Score=40.33 Aligned_cols=43 Identities=16% Similarity=0.277 Sum_probs=33.0
Q ss_pred HHHHHhcCcCCCEEEeCcC---hhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 37 ANKSVEFVKSGMVVGLGTD---STATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 37 A~~A~~~V~~g~vIGLGsG---STv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
+++|++.|+|||+|++|+- .+-..++++|.++ + .+|+|+|.++
T Consensus 7 ~~eAv~~I~DG~ti~~gGf~~~g~P~~li~al~~~---~-~kdLt~v~~~ 52 (481)
T 3k6m_A 7 AVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKT---G-VKELTAVSNN 52 (481)
T ss_dssp HHHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHH---C-CCSEEEECSC
T ss_pred HHHHHhhCCCCCEEEECCccccCcHHHHHHHHHHc---C-CCceEEEEeC
Confidence 5678889999999999962 2357788888764 3 4689999774
No 52
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=80.56 E-value=1.5 Score=41.11 Aligned_cols=49 Identities=22% Similarity=0.295 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcCcCCCEEEeCc--C-hhHHHHHHHHHhHHh----cCCCCCEEEec
Q 036939 33 KKIAANKSVEFVKSGMVVGLGT--D-STATHAVDKIGELLH----QGKLKNIVGIP 81 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~vIGLGs--G-STv~~~i~~L~~~~~----~~~l~~i~~V~ 81 (215)
|..-|++|+++|+|||+|++|+ | .+-..++++|++|.. .+...+++.++
T Consensus 13 KlvSaeEAv~~IkdGd~V~~~Gf~~~G~P~~L~~ALa~R~~~~~~~g~~~~i~l~~ 68 (514)
T 4eu9_A 13 KVCPAETASELIKHGDVVGTSGFTGAGYPKEVPKALAQRMEAAHDRGEKYQISLIT 68 (514)
T ss_dssp GBCCHHHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred CCCcHHHHHHhCCCCCEEEECCCCCCcCHHHHHHHHHHHHHHhhcCCcceeEEEEE
Confidence 4444789999999999999984 3 244567788877643 23333566654
No 53
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=80.56 E-value=1.4 Score=40.73 Aligned_cols=48 Identities=19% Similarity=0.280 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCcCCCEEEeCcCh-hHHHHHHHHHhHHhcCCCCCEEEecC
Q 036939 33 KKIAANKSVEFVKSGMVVGLGTDS-TATHAVDKIGELLHQGKLKNIVGIPT 82 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~vIGLGsGS-Tv~~~i~~L~~~~~~~~l~~i~~V~t 82 (215)
|..-+++|+++|++||+|++|++. +-..++++|.++.+ +++++++++.
T Consensus 14 K~~saeEAv~~IkdGd~V~~~g~~g~P~~L~~ALa~r~~--~l~~v~l~~~ 62 (434)
T 3eh7_A 14 RIVSAEEAVKHIKNGERVALSHAAGVPQSCVDALVQQAD--LFQNVEIYHM 62 (434)
T ss_dssp GEECHHHHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTT--TC--CEEECC
T ss_pred cCCcHHHHHHhCCCcCEEEECCccCCHHHHHHHHHHhHh--hcCCeEEEEe
Confidence 445588999999999999999753 45778899988753 3678888764
No 54
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=77.84 E-value=3.4 Score=39.01 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhcC------cCCCEEEeCcChhHHHHHHHHHhH
Q 036939 30 DELKKIAANKSVEFV------KSGMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V------~~g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
++.++++|+.|+++| ++|+++=+|.|+.-..++..|.++
T Consensus 250 ~~~~~~IA~~~a~~i~~~g~l~dG~~lqlGiG~ip~aV~~~L~~~ 294 (519)
T 2hj0_A 250 NPKELLIAEYAAKVITSSPYYKEGFSFQTGTGGASLAVTRFMREQ 294 (519)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCSTTCEEECCSSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcccCCCCCEEEeccChHHHHHHHHHhhh
Confidence 356788999999985 999999999997777777777665
No 55
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=76.35 E-value=2.9 Score=34.87 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHHhcCcC--CCEEEeCcChhHHHHHHHHHhH
Q 036939 28 TQDELKKIAANKSVEFVKS--GMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V~~--g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
+.+++=+.+|+.-.+.+++ ..+|||.+|||...+.+.|.+.
T Consensus 9 ~~~~l~~~aA~~i~~~i~~~~~~~l~lsgGstp~~~~~~L~~~ 51 (238)
T 1y89_A 9 TADAVVKSLADDMLAYSQQGQPVHISLSGGSTPKMLFKLLASQ 51 (238)
T ss_dssp SHHHHHHHHHHHHHHHHTTSSCEEEEECCSHHHHHHHHHHTST
T ss_pred CHHHHHHHHHHHHHHHHHhCCCEEEEECCCccHHHHHHHHHhh
Confidence 3445555566655555555 6799999999999999999753
No 56
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=76.16 E-value=3.3 Score=35.61 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 32 LKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 32 ~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.++.+|++|++.+++|+++-+|.| .-...+..+.+
T Consensus 7 ~~e~Ia~~aA~~i~dG~~v~lGiG-iP~~va~~~~~ 41 (260)
T 1poi_B 7 NKEMQAVTIAKQIKNGQVVTVGTG-LPLIGASVAKR 41 (260)
T ss_dssp HHHHHHHHHHTTCCTTCEEECCSS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEeCCC-HHHHHHHHHHH
Confidence 367999999999999999999999 55555555543
No 57
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=74.33 E-value=3.6 Score=34.66 Aligned_cols=54 Identities=31% Similarity=0.418 Sum_probs=37.0
Q ss_pred HHHHHH-HHHh--cCcCCCE---EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 33 KKIAAN-KSVE--FVKSGMV---VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 33 K~~aA~-~A~~--~V~~g~v---IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
|.+||- ..++ .+++|++ +|-|||+|+.++++..+. +| .+.+|=.|.+....+++
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~---~G---~V~avD~s~~~~~~l~~ 120 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGP---RG---RIYGVEFAPRVMRDLLT 120 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCT---TC---EEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCC---Cc---eEEEEeCCHHHHHHHHH
Confidence 554442 3344 5799996 688889999999887754 23 37788888777655543
No 58
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=74.08 E-value=2.3 Score=35.49 Aligned_cols=23 Identities=26% Similarity=0.471 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCcCCCEEEeCcC
Q 036939 33 KKIAANKSVEFVKSGMVVGLGTD 55 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~vIGLGsG 55 (215)
|+.+|++|++.++||++|-||.|
T Consensus 2 r~~Ia~raA~el~dG~~vnlGIG 24 (207)
T 3rrl_B 2 REAIIKRAAKELKEGMYVNLGIG 24 (207)
T ss_dssp HHHHHHHHHTTCCTTCEEEECTT
T ss_pred hHHHHHHHHHhCCCCCEEEECCC
Confidence 78999999999999999999999
No 59
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=73.87 E-value=3.7 Score=34.96 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHHhcCcC------CCEEEeCcChhHHHHHHHHHhH
Q 036939 28 TQDELKKIAANKSVEFVKS------GMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V~~------g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
+.+++=+.+|+.-++.+++ ..+|||.+|||-..+.+.|.+.
T Consensus 13 ~~~~l~~~aA~~i~~~i~~a~~~~~~~~l~LsgGstp~~ly~~L~~~ 59 (267)
T 3css_A 13 NLSQMSFAAREVILAAIDARVDKSVPVVLALSGGSTPKRLYEELHEK 59 (267)
T ss_dssp SHHHHHHHHHHHHHHHHHTCSSTTSCEEEEECCSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHHh
Confidence 3445555555554444433 5699999999999999999864
No 60
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=72.24 E-value=3.2 Score=29.16 Aligned_cols=61 Identities=11% Similarity=0.114 Sum_probs=43.4
Q ss_pred EEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeee
Q 036939 124 VEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHG 193 (215)
Q Consensus 124 VEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~G 193 (215)
|.+.|.....+.++|.++ |+++. -.+|-.-++++-+.+.+ ..+.+++- +.|..+ |||..+-
T Consensus 8 v~~~~~~~~~~~~~l~~~-------peV~~~~~vtG~~D~ll~v~~~d-~~~l~~~l~~~l~~~-~gV~~~~ 70 (92)
T 2djw_A 8 IRPRGNRVQALGEAIAEL-------PQVAEVYSVTGPYDLVALVRLKD-VEELDDVVTQGILSL-EGVERTE 70 (92)
T ss_dssp EEECGGGHHHHHHHHTTS-------TTEEEEEEESSSSSEEEEEEESS-GGGHHHHCCCCCTTS-TTEEEEE
T ss_pred EEEcCCCHHHHHHHHhcC-------CCeEEEEEeecCCCEEEEEEECC-HHHHHHHHHHhcccC-CCEeEEE
Confidence 556677778888888775 34444 57887889999999875 66666653 467788 9996553
No 61
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=70.35 E-value=21 Score=30.12 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=44.2
Q ss_pred HHHHHHh--cCcCCCEEEe-C-cChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCCC------
Q 036939 36 AANKSVE--FVKSGMVVGL-G-TDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSHP------ 104 (215)
Q Consensus 36 aA~~A~~--~V~~g~vIGL-G-sGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~~------ 104 (215)
.|..|++ .+++|+.|-+ | +|..=..+++.+.. .| . .+.++.++.+ ..+++++|.. +++..+.+
T Consensus 140 ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~---~G-a-~vi~~~~~~~-~~~~~~lGa~~~i~~~~~~~~~~~~ 213 (321)
T 3tqh_A 140 TALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ---KG-T-TVITTASKRN-HAFLKALGAEQCINYHEEDFLLAIS 213 (321)
T ss_dssp HHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHH---TT-C-EEEEEECHHH-HHHHHHHTCSEEEETTTSCHHHHCC
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHH---cC-C-EEEEEeccch-HHHHHHcCCCEEEeCCCcchhhhhc
Confidence 3555555 5689987777 4 66665555554432 23 2 3555554444 7788999987 55444332
Q ss_pred -ceeEEEecCC
Q 036939 105 -VIDLAIDGAD 114 (215)
Q Consensus 105 -~iDl~iDGaD 114 (215)
.+|+.||-.-
T Consensus 214 ~g~D~v~d~~g 224 (321)
T 3tqh_A 214 TPVDAVIDLVG 224 (321)
T ss_dssp SCEEEEEESSC
T ss_pred cCCCEEEECCC
Confidence 5788888554
No 62
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=67.77 E-value=5.2 Score=33.60 Aligned_cols=59 Identities=14% Similarity=0.214 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhcCcCCCE---EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 29 QDELKKIAANKSVEFVKSGMV---VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~g~v---IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
.++.-+.++.-|..++++|.. ||-|||..+..+++.+. ..+. .+++|=.|......|++
T Consensus 53 Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~----~~~~-~v~gvD~s~~ml~~A~~ 114 (261)
T 4gek_A 53 YSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIH----HDNC-KIIAIDNSPAMIERCRR 114 (261)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCC----SSSC-EEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcC----CCCC-EEEEEECCHHHHHHHHH
Confidence 445566777888889999974 67788887766655432 2223 48889888887766654
No 63
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=64.25 E-value=7.3 Score=29.63 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=44.9
Q ss_pred eEEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeeec
Q 036939 123 PVEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGMF 195 (215)
Q Consensus 123 PVEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GLF 195 (215)
=+.+.|.....+.+.|.++ +.++. -.+|-..|+++-+.+.+ ..+.+++-+.|..+ |||..+--+
T Consensus 72 ~v~~~~~~~~~~~~~l~~~-------p~V~~~~~~tG~~d~~~~v~~~d-~~~l~~~~~~l~~~-~gV~~~~t~ 136 (151)
T 2cyy_A 72 LVKVKAGKYSEVASNLAKY-------PEIVEVYETTGDYDMVVKIRTKN-SEELNNFLDLIGSI-PGVEGTHTM 136 (151)
T ss_dssp EEEECTTCHHHHHHHHHTC-------TTEEEEEECSSSSSEEEEEEESS-HHHHHHHHHHHHTS-TTEEEEEEE
T ss_pred EEEECcccHHHHHHHHhcC-------CCeeEeeEecCCCCEEEEEEECC-HHHHHHHHHHHhCC-CCEeEEEEE
Confidence 3455688889999998876 23333 34566669999999875 55666655778889 999765433
No 64
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=63.41 E-value=63 Score=26.73 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhc---------C----------CCCCEEEecCc---HHHHH
Q 036939 31 ELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQ---------G----------KLKNIVGIPTS---KTTHD 88 (215)
Q Consensus 31 ~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~---------~----------~l~~i~~V~tS---~~t~~ 88 (215)
-.|...|..++..+.+|.++.+||-.+....+++.+++... | .++++.+|+.- .+.-.
T Consensus 49 ~~~L~~A~~~i~~~~~~~ilfV~tk~~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~~~~~~~Pdllvv~Dp~~d~~ai~ 128 (202)
T 3j20_B 49 DERLKVAGKFLAKFEPQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVLIVTDPRADHQAMR 128 (202)
T ss_dssp HHHHHHHHHHHHHSCSSCEEEECCCTTTHHHHHHHHHHHSCCCCCSSCCSSSSSCSSSSSCCCCSEEEESCTTTSHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEEEecChHHHHHHHHHHHHHCCceeCceecCCCcccHhHHhccCCCeEEEeCCccchHHHH
Confidence 34555555566666899999999999998888887765321 1 24566666543 34447
Q ss_pred HHHHCCCCeeecCC----CCceeEEEecCC
Q 036939 89 QAVSLGIPLSDLDS----HPVIDLAIDGAD 114 (215)
Q Consensus 89 ~~~~~Gi~v~~l~~----~~~iDl~iDGaD 114 (215)
+|..+|||++.+-+ .+.+|+.|=|-|
T Consensus 129 EA~~l~IP~Ial~DTn~~p~~Vd~~IP~Nd 158 (202)
T 3j20_B 129 EAVEIGIPIVALVDTENLLSYVDLAIPTNN 158 (202)
T ss_dssp HHHHHTCCEEEEECTTCCCTTCCEEEECCC
T ss_pred HHHHcCCCEEEEEcCCCCccccCEEEeCCC
Confidence 88999999885422 235777776654
No 65
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=62.12 E-value=7.9 Score=36.03 Aligned_cols=39 Identities=8% Similarity=0.108 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.++..+++|+.++++|+||..+=+|-|+.-..++..|.+
T Consensus 217 ~~~~~~~Ia~~va~~i~dG~~lQ~GiG~ip~Av~~~L~~ 255 (455)
T 3qli_A 217 AIPEYTSISHIIADLVPDGACLQMGVGALPNLVCGVLKD 255 (455)
T ss_dssp CCTHHHHHHHHHHHTCCTTCEEEECSSHHHHHHHHHGGG
T ss_pred CChHHHHHHHHHHHHhcCCCeEEeccchHHHHHHHhcCc
Confidence 346678899999999999999999999999988888865
No 66
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=61.60 E-value=11 Score=29.08 Aligned_cols=50 Identities=24% Similarity=0.226 Sum_probs=38.8
Q ss_pred CCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 46 SGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 46 ~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
...++=+|.|..-..+++.|.+.. | . +++++-.+.+....+++.|+.++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~--g-~-~V~vid~~~~~~~~~~~~g~~~~~ 88 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY--G-K-ISLGIEIREEAAQQHRSEGRNVIS 88 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH--C-S-CEEEEESCHHHHHHHHHTTCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc--C-C-eEEEEECCHHHHHHHHHCCCCEEE
Confidence 446888899999999999886520 3 3 699998888888888888988663
No 67
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=61.59 E-value=9.9 Score=32.93 Aligned_cols=57 Identities=21% Similarity=0.251 Sum_probs=36.9
Q ss_pred ccCCCCCCC-----CCHHHHHHHHHHHHHhcCc------CC-CEEEeCcChhHHHHHHHHHhHHhcCCC
Q 036939 18 SSLSPTSVG-----LTQDELKKIAANKSVEFVK------SG-MVVGLGTDSTATHAVDKIGELLHQGKL 74 (215)
Q Consensus 18 ~~~~~~~~m-----~~~~~~K~~aA~~A~~~V~------~g-~vIGLGsGSTv~~~i~~L~~~~~~~~l 74 (215)
+.+..|..| .+.+++-+.+|+.-++.++ .+ .+|||-+|||-..+-+.|.++.+++.+
T Consensus 14 ~~~~~~~~M~i~i~~~~~~la~~aA~~i~~~i~~a~~~~~~~~~l~LsgGsTP~~~y~~L~~~~~~~~i 82 (289)
T 3hn6_A 14 AQTQGPGSMRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKI 82 (289)
T ss_dssp -----CCSCEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSSTTHHHHHHHHHHHHTTSC
T ss_pred hhhcCCCceEEEEECCHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCCccHHHHHHHHHHhHhhcCC
Confidence 444555555 3566666666666666553 23 589999999999999999886655544
No 68
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=61.12 E-value=5.3 Score=36.65 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.+.++++|+.|++++++|+++=+|-|+.-..+...|.+
T Consensus 187 ~~~~~~Ia~~~a~~i~dg~~lqlGiG~ip~av~~~l~~ 224 (436)
T 2oas_A 187 DAVSLAIGQHVAELVRDGDCLQMGIGAIPDAVLSCLTG 224 (436)
T ss_dssp CHHHHHHHHHHHHHCCTTCEEECCSSHHHHHHHHTCTT
T ss_pred ChHHHHHHHHHHHhcCCCCEEeecCcHHHHHHHHHHhh
Confidence 46788999999999999999999999888888887755
No 69
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=60.41 E-value=19 Score=34.19 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcC--------cCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc----HHHHHHHHHCCCCee
Q 036939 33 KKIAANKSVEFV--------KSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS----KTTHDQAVSLGIPLS 98 (215)
Q Consensus 33 K~~aA~~A~~~V--------~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS----~~t~~~~~~~Gi~v~ 98 (215)
-...|..+++|+ ++|++||+|+|-+..--.-+|+-.....++++....+-. -++-..+.+.|++-+
T Consensus 413 dL~fAw~v~K~vkSNAIv~akdg~tvGiGaGQ~sRV~s~r~A~~kAg~~~~G~vlaSDAFFPF~D~ve~aa~aGv~aI 490 (523)
T 3zzm_A 413 DLVFAWRACRAVKSNAIVIAADGATVGVGMGQVNRVDAARLAVERGGERVRGAVAASDAFFPFPDGLETLAAAGVTAV 490 (523)
T ss_dssp HHHHHHHHGGGSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHHGGGCTTCEEEESSCCSSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhccCceEEEEECCeEEEECCCCcchHHHHHHHHHHhccccCCeEEEeccCcCCCccHHHHHHcCCEEE
Confidence 356789999988 578899999998877555555432222234444333221 366677888898854
No 70
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=60.07 E-value=4.9 Score=33.63 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=19.5
Q ss_pred CCCEEEeCcChhHHHHHHHHHh
Q 036939 46 SGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 46 ~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
...+|||.+|||-..+.+.|.+
T Consensus 45 ~~~~l~LsgGsTp~~ly~~L~~ 66 (232)
T 1vl1_A 45 DKIFVVLAGGRTPLPVYEKLAE 66 (232)
T ss_dssp SCEEEEECCSTTHHHHHHHHTT
T ss_pred CCeEEEEcCCccHHHHHHHHHH
Confidence 3679999999999999999974
No 71
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=59.94 E-value=74 Score=26.43 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHh---------cC----------CCCCEEEecCc---HHHH
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLH---------QG----------KLKNIVGIPTS---KTTH 87 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~---------~~----------~l~~i~~V~tS---~~t~ 87 (215)
...|..-|..++..+++|.++-+||-......+++.+++.. .| .++++.+|..- .+.-
T Consensus 52 T~~~L~~A~~~i~~i~~~~iLfVgTk~~~~~~V~~~A~~~g~~~v~~rwlgG~LTN~~~~~f~~PdlliV~Dp~~e~~ai 131 (208)
T 1vi6_A 52 LDERIRVAAKFLSRYEPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAIDKQAV 131 (208)
T ss_dssp HHHHHHHHHHHHTTSCGGGEEEEECSGGGHHHHHHHHHHHCCEEEESSCCTTTTTCTTSTTCCCCSEEEESCTTTTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhCCeeecCEECCCcccChhhHhhCCCCEEEEECCCcchhHH
Confidence 34455556666665588999999999999888888776532 11 23566666542 3444
Q ss_pred HHHHHCCCCeeecCC----CCceeEEEecCC
Q 036939 88 DQAVSLGIPLSDLDS----HPVIDLAIDGAD 114 (215)
Q Consensus 88 ~~~~~~Gi~v~~l~~----~~~iDl~iDGaD 114 (215)
.+|..+|||++.+-+ .+.+|+.|=|-|
T Consensus 132 ~EA~~l~IPvIalvDTn~~p~~Vd~~IP~Nd 162 (208)
T 1vi6_A 132 SEATAVGIPVVALCDSNNSSADVDLVIPTNN 162 (208)
T ss_dssp HHHHHTTCCEEEEECTTCCCTTCSEEEESCC
T ss_pred HHHHHhCCCEEEEeCCCCCccccCEEEeCCC
Confidence 889999999886522 224666665554
No 72
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=59.53 E-value=2.6 Score=30.78 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=38.8
Q ss_pred HHHHHHhcchhcCCCceeecc--eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEee
Q 036939 133 FTANRFPDLFKDCGCVAKLRT--CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEH 192 (215)
Q Consensus 133 ~v~~~l~~l~~~~G~~~~lR~--p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~ 192 (215)
.+..++.+++.++|.-..-|+ |+...|=+.| -+....+-....+|..+|.+| +||---
T Consensus 19 ~~a~kvn~iL~~yg~~I~gRmGiP~~~~~~~iI-sl~v~~~~d~I~aL~gkLg~i-~GV~vK 78 (86)
T 2nzc_A 19 KAYRQVNELLHNFSEDILLRVGYPVREENMAII-FLVLKTDNDTIGALSGKLGQI-SGVRVK 78 (86)
T ss_dssp HHHHHHHHHHHHTGGGEEEEEEEEEGGGTEEEE-EEEEEECHHHHHHHHHHHHTS-TTEEEE
T ss_pred hhHHHHHHHHHhccCEEEEEcCCCcCcCCceEE-EEEEECCHHHHHHHHHHhCCC-CCEEEE
Confidence 344455666555688888898 9987554444 344433334578899999999 999543
No 73
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=59.25 E-value=7.2 Score=36.16 Aligned_cols=39 Identities=10% Similarity=0.312 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.++.++++|+.++++|++|+++=+|-|+.-..+++.|.+
T Consensus 191 ~~~~~~~IA~~~a~~i~dG~~lqlGIG~ip~aV~~~L~~ 229 (448)
T 3gk7_A 191 IGEVEAAIGKHCASLIEDGSTLQLGIGAIPDAVLSQLKD 229 (448)
T ss_dssp CCHHHHHHHHHHHTTCCTTCEEEBCSSHHHHHHHHTCTT
T ss_pred CCcHHHHHHHHHHHHccCCCEEEeccCcHHHHHHHHhhh
Confidence 457788999999999999999999999887777777754
No 74
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=58.91 E-value=53 Score=28.53 Aligned_cols=74 Identities=20% Similarity=0.225 Sum_probs=43.4
Q ss_pred HHHHHh--cCcCCCEEE-eCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCC----------
Q 036939 37 ANKSVE--FVKSGMVVG-LGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSH---------- 103 (215)
Q Consensus 37 A~~A~~--~V~~g~vIG-LGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~---------- 103 (215)
|..|+. .+++|+.|- +|+|..=...++ |++. .| .+.+.++..|.+-..+++++|..+++..+.
T Consensus 174 a~~al~~~~~~~g~~VlV~GaG~vG~~aiq-lAk~--~G-a~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 174 GYHGAVTAGVGPGSTVYVAGAGPVGLAAAA-SARL--LG-AAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHH--TT-CSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCcHHHHHHHH-HHHH--CC-CCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHH
Confidence 444444 467887433 566554444444 4432 12 224666777888788899999876554321
Q ss_pred ---CceeEEEecCC
Q 036939 104 ---PVIDLAIDGAD 114 (215)
Q Consensus 104 ---~~iDl~iDGaD 114 (215)
..+|+.||-+-
T Consensus 250 t~g~g~Dvvid~~G 263 (398)
T 1kol_A 250 LGEPEVDCAVDAVG 263 (398)
T ss_dssp HSSSCEEEEEECCC
T ss_pred hCCCCCCEEEECCC
Confidence 14788888553
No 75
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=58.83 E-value=12 Score=30.78 Aligned_cols=51 Identities=8% Similarity=-0.085 Sum_probs=40.8
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
-+.|-+-|+||+..|.+.+.+... .+.++++++-|..|++.++++|++..-
T Consensus 186 ~d~v~ftS~s~v~~~~~~~~~~~~--~l~~~~~~aIG~~Ta~~l~~~G~~~~~ 236 (254)
T 4es6_A 186 LNGLVVSSGQGLQNLYQLAAADWP--EIGRLPLFVPSPRVAEMARELGAQRVI 236 (254)
T ss_dssp CCEEECCSHHHHHHHHHHHGGGHH--HHTTSCEEESSHHHHHHHHHTTCSSEE
T ss_pred CCEEEEcCHHHHHHHHHHhhHHHH--HHhCCeEEEECHHHHHHHHHcCCCceE
Confidence 368889999999999998865311 133577899999999999999998653
No 76
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=58.64 E-value=16 Score=28.69 Aligned_cols=61 Identities=8% Similarity=0.024 Sum_probs=45.4
Q ss_pred EEEccc--------cHHHHHHHHhcchhcCCCceeecceeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeee
Q 036939 124 VEVVPV--------CWKFTANRFPDLFKDCGCVAKLRTCYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHG 193 (215)
Q Consensus 124 VEV~P~--------a~~~v~~~l~~l~~~~G~~~~lR~p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~G 193 (215)
|.+.|. .+..+.+.|.++ +.++.-++|-..|+++-+...+ ..+.+++- +.|..+ |||..+-
T Consensus 82 v~~~~~~~~~f~~~~~~~~~~~l~~~-------peV~~~~vtG~~dll~~v~~~d-~~~l~~~l~~~l~~~-~gV~~~~ 151 (171)
T 2ia0_A 82 LEVGKPVIEDFLERYISYISSTLSAL-------PGVLFVAKSGEDKIIALVGKNN-KDELVKFIEENITSI-PNLKHIQ 151 (171)
T ss_dssp EEESCC--CHHHHHHHHHHHHHHHTS-------TTEEEEEEETTTEEEEEEEESS-TTHHHHHHHHHTTTS-TTEEEEE
T ss_pred EEECCccccccchhHHHHHHHHHHCC-------CCeEEEEEcCCCCEEEEEEECC-HHHHHHHHHHHhhcC-CCeeEEE
Confidence 555666 677777777765 3444434787789999998875 77787776 788899 9998776
No 77
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=57.11 E-value=9.6 Score=30.08 Aligned_cols=64 Identities=11% Similarity=0.103 Sum_probs=44.9
Q ss_pred eeEEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEeeee
Q 036939 122 VPVEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEHGM 194 (215)
Q Consensus 122 lPVEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~GL 194 (215)
+=+.+.|.....+.+.|.++ ++++. -.+|-..|+++-+.+.+ ..+.+++-+.|..+ |||..+--
T Consensus 91 v~v~~~~~~~~~v~~~l~~~-------peV~~~~~vtG~~d~l~~v~~~d-~~~l~~~l~~l~~~-~gV~~~~t 155 (171)
T 2e1c_A 91 ILVKVKAGKYSEVASNLAKY-------PEIVEVYETTGDYDMVVKIRTKN-SEELNNFLDLIGSI-PGVEGTHT 155 (171)
T ss_dssp EEEEECTTCHHHHHHHHHTS-------TTEEEEEECSSSSSEEEEEEESS-HHHHHHHHHHHHHS-TTEEEEEE
T ss_pred EEEEECcchHHHHHHHHhcC-------cCeEEEEEeeCCCCEEEEEEECC-HHHHHHHHHHHhcC-CCcceEEE
Confidence 33466688899999999886 33333 34566669999998875 55666555678889 99976543
No 78
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=55.40 E-value=36 Score=25.09 Aligned_cols=49 Identities=18% Similarity=0.113 Sum_probs=39.9
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeec
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDL 100 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l 100 (215)
+.++=+|.|..-..+++.|.++ | . +++++-.+.+....+++.|++++.-
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~---g-~-~v~vid~~~~~~~~~~~~g~~~i~g 56 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS---D-I-PLVVIETSRTRVDELRERGVRAVLG 56 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---T-C-CEEEEESCHHHHHHHHHTTCEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHC---C-C-CEEEEECCHHHHHHHHHcCCCEEEC
Confidence 5688889999999999988652 2 3 6999999999888888889887643
No 79
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=54.39 E-value=9.7 Score=28.78 Aligned_cols=62 Identities=18% Similarity=0.145 Sum_probs=41.4
Q ss_pred EEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecC-CCCCCCHHHHH-HHHccccCeEEeeee
Q 036939 124 VEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYF-KKDIGDMEVAS-NRILRLIAGVVEHGM 194 (215)
Q Consensus 124 VEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f-~~~i~dp~~l~-~~L~~i~pGVVe~GL 194 (215)
+.+.|.....+.+.|.++ +.++. -.+|-.-|+++-+.+ .+ ..+.+++- +.|..+ |||..+--
T Consensus 75 v~~~~~~~~~~~~~l~~~-------peV~~~~~vtG~~d~~~~v~~~~d-~~~l~~~~~~~l~~~-~gV~~~~t 139 (151)
T 2dbb_A 75 KSKVPSDADKVISEISDI-------EYVKSVEKGVGRYNIIVRLLLPKD-IKDAENLISEFLQRI-KNAENVEV 139 (151)
T ss_dssp EESSHHHHHHHHHHHTTC-------TTEEEEEEEESSCSEEEEEEEESS-HHHHHHHHHHHHHTC-CSEEEEEE
T ss_pred EEeCCCCHHHHHHHHHcC-------CCeEEEeEecCCCCEEEEEEEcCC-HHHHHHHHHHHhhcC-CCeeEEEE
Confidence 444566666777777765 33443 456777799999998 64 55555554 677889 99976543
No 80
>3ix7_A Uncharacterized protein TTHA0540; unknown function, thermus thermophilus HB8, structural genom 2, protein structure initiative; HET: MSE; 2.15A {Thermus thermophilus}
Probab=53.73 E-value=23 Score=27.50 Aligned_cols=67 Identities=9% Similarity=0.118 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhcCc----CCCEEE---eCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCC
Q 036939 30 DELKKIAANKSVEFVK----SGMVVG---LGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDS 102 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~----~g~vIG---LGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~ 102 (215)
++.||..|+.+++.++ .+.+-- ...++.+-..+.+++.. + +.++||+...-.+.|+.+|++++.+.+
T Consensus 51 d~~~r~rGr~gL~iL~~L~~~~~vei~~~~~~~~~vD~~ll~lA~~-----~-~~~lvTnD~~L~kvA~~~GI~Vl~l~~ 124 (134)
T 3ix7_A 51 DPLRRAKGRRGLETLERLREAAPLEVLETTPKGESVDEKLLFLARD-----L-EAALVTNDHALLQMARIYGVKALSIQA 124 (134)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCEEEECCCCSCSSHHHHHHHHHHH-----T-TCEEEESCHHHHHHHHHTTCCEEEHHH
T ss_pred chhhHHHHHHHHHHHHHHHhcCCEEEeCCCCCcccHHHHHHHHHHH-----h-CCEEEeCCHHHHHHHHHCCCeEEehHH
Confidence 4568888888888553 111222 24567777777778754 2 468999999999999999999997754
No 81
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=52.62 E-value=30 Score=32.96 Aligned_cols=66 Identities=23% Similarity=0.258 Sum_probs=42.1
Q ss_pred HHHHHHHHHhcC--------cCCCEEEeCcChhHHHHHHHHHhHHh-c-C-CCCCEEEec----CcHHHHHHHHHCCCCe
Q 036939 33 KKIAANKSVEFV--------KSGMVVGLGTDSTATHAVDKIGELLH-Q-G-KLKNIVGIP----TSKTTHDQAVSLGIPL 97 (215)
Q Consensus 33 K~~aA~~A~~~V--------~~g~vIGLGsGSTv~~~i~~L~~~~~-~-~-~l~~i~~V~----tS~~t~~~~~~~Gi~v 97 (215)
-...|..+++|+ ++|++||+|+|-+..--.-+|+-... + | .+++....+ +=.++-..+.+.|++-
T Consensus 421 DL~FAw~v~K~vKSNAIv~akdg~tvGiGaGQ~sRV~s~r~A~~kA~~~g~~~~G~vlASDAFFPF~D~ve~Aa~aGV~a 500 (534)
T 4ehi_A 421 DLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQGCVLASEAFFPFRDSIDEASKVGVKA 500 (534)
T ss_dssp HHHHHHHHHHHSCSSCEEEEETTEEEEEECSSSCHHHHHHHHHHHHHHTTCCCTTCEEECSSCCCSTHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcCCceEEEEeCCeEEEECCCCcchHHHHHHHHHHHHhhccCCCCeEEEeccccCCCccHHHHHHcCCEE
Confidence 346789999988 57889999999987755555542222 1 1 234443333 1236667788888884
Q ss_pred e
Q 036939 98 S 98 (215)
Q Consensus 98 ~ 98 (215)
+
T Consensus 501 I 501 (534)
T 4ehi_A 501 I 501 (534)
T ss_dssp E
T ss_pred E
Confidence 4
No 82
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=51.43 E-value=12 Score=34.50 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHH
Q 036939 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIG 66 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~ 66 (215)
.++..+++|+.|+++|++|.++=+|-|+....+...|.
T Consensus 195 ~~~~~~~Ia~~~a~~i~dG~~lq~GiG~ip~AV~~~L~ 232 (434)
T 3eh7_A 195 IGEVEEAIGRNCAELIEDGATLQLGIGAIPDAALLFLK 232 (434)
T ss_dssp CCHHHHHHHHHHHHTCCTTCEEECCSSHHHHHHHHTTT
T ss_pred CChHHHHHHHHHHHhccCCCEEEeccchHHHHHHHHhh
Confidence 34678889999999999999999999988777777765
No 83
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=51.28 E-value=11 Score=27.87 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=40.8
Q ss_pred EEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeee
Q 036939 124 VEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHG 193 (215)
Q Consensus 124 VEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~G 193 (215)
+.+.|.....+.+.|.++ +.++. -.+|-..|+++-+.+.+ ..+.+++- +.|..+ |||..+-
T Consensus 70 ~~~~~~~~~~~~~~l~~~-------~~v~~~~~~~G~~d~~~~v~~~d-~~~l~~~~~~~l~~~-~gV~~~~ 132 (141)
T 1i1g_A 70 VDTKPEKLFEVAEKLKEY-------DFVKELYLSSGDHMIMAVIWAKD-GEDLAEIISNKIGKI-EGVTKVC 132 (141)
T ss_dssp EEECGGGHHHHHHHHHHS-------TTEEEECCCSSSSSEEEEEEESS-HHHHHHHHHHTTTTS-TTEEEEE
T ss_pred EEECchhHHHHHHHHhcC-------CCeEEEEEecCCCCEEEEEEECC-HHHHHHHHHHHhhcC-CCEeEEE
Confidence 345677888888888886 23333 34566668999888764 44454444 566788 9997654
No 84
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=51.00 E-value=39 Score=28.22 Aligned_cols=90 Identities=17% Similarity=0.278 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec-------C-----cHHHHHHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP-------T-----SKTTHDQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~-------t-----S~~t~~~~~~~Gi~v 97 (215)
++.=+.+.++|.++==+.-+|.=-||.|+..+++.+ ++ + ++.+|+ + |.++++.+++.|+++
T Consensus 29 ~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~-----~~-i-~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V 101 (201)
T 1vp8_A 29 EETLRLAVERAKELGIKHLVVASSYGDTAMKALEMA-----EG-L-EVVVVTYHTGFVREGENTMPPEVEEELRKRGAKI 101 (201)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHC-----TT-C-EEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHh-----cC-C-eEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEE
Confidence 444455666776652236789999999998888865 22 4 688888 3 789999999999998
Q ss_pred eecCCCCceeEEEecCC-cccCCC--CeeEEEccccHH
Q 036939 98 SDLDSHPVIDLAIDGAD-EVDPGL--AVPVEVVPVCWK 132 (215)
Q Consensus 98 ~~l~~~~~iDl~iDGaD-eVd~K~--plPVEV~P~a~~ 132 (215)
+.-.-. |.|.+ .+..|| .-|+|++..++.
T Consensus 102 ~t~tH~------lsgveR~is~kfGG~~p~eiiA~tLR 133 (201)
T 1vp8_A 102 VRQSHI------LSGLERSISRKLGGVSRTEAIAEALR 133 (201)
T ss_dssp EECCCT------TTTTHHHHHHHTCCCCHHHHHHHHHH
T ss_pred EEEecc------ccchhHHHHHhcCCCCHHHHHHHHHH
Confidence 854322 11111 112256 367787766655
No 85
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=50.89 E-value=14 Score=30.10 Aligned_cols=52 Identities=12% Similarity=0.012 Sum_probs=40.2
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
-+.|-+-|+||+..|.+.+.+...+ .+++.+++.-|..|+..++++|++.+-
T Consensus 173 ~d~v~ftS~s~v~~~~~~~~~~~~~-~l~~~~~~aiG~~ta~~l~~~G~~~~~ 224 (240)
T 3mw8_A 173 IDTIVVTSGEVLENLINLVPKDSFA-WLRDCHIIVPSARVETQARKKGLRRVT 224 (240)
T ss_dssp CCEEECCSHHHHHHHHHHSCGGGHH-HHHHSEEEESSHHHHHHHHHTTCCCEE
T ss_pred CCEEEEcCHHHHHHHHHHcchHHHH-HHhCCCEEEECHHHHHHHHHcCCCceE
Confidence 3689999999999999987543110 122577899999999999999998653
No 86
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=50.84 E-value=82 Score=27.39 Aligned_cols=74 Identities=16% Similarity=0.111 Sum_probs=43.5
Q ss_pred HHHHHh--cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCC---------
Q 036939 37 ANKSVE--FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHP--------- 104 (215)
Q Consensus 37 A~~A~~--~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~--------- 104 (215)
|..|++ -+++|+. +=+|+|..=..+++ +++. .| ...+.++..|.+-..+++++|..+++..+.+
T Consensus 174 a~~al~~~~~~~g~~VlV~GaG~vG~~aiq-lak~--~G-a~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 174 GFHGCVSAGVKPGSHVYIAGAGPVGRCAAA-GARL--LG-AACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHH--HT-CSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCHHHHHHHH-HHHH--cC-CCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHH
Confidence 344444 4677874 44566554444444 3332 12 2247777778887888999998765543211
Q ss_pred ----ceeEEEecCC
Q 036939 105 ----VIDLAIDGAD 114 (215)
Q Consensus 105 ----~iDl~iDGaD 114 (215)
.+|+.||-..
T Consensus 250 ~~g~g~Dvvid~~g 263 (398)
T 2dph_A 250 LGKPEVDCGVDAVG 263 (398)
T ss_dssp HSSSCEEEEEECSC
T ss_pred hCCCCCCEEEECCC
Confidence 4788888764
No 87
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=50.35 E-value=27 Score=30.13 Aligned_cols=69 Identities=10% Similarity=0.038 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH----H--------HHHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT----T--------HDQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~----t--------~~~~~~~Gi~v 97 (215)
.++|+++.+.+++.+.....|-.|+|++...=+-+++++.++-+...+-++|+.+. + +..+...++|+
T Consensus 66 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPi 145 (307)
T 3s5o_A 66 SSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPV 145 (307)
T ss_dssp HHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCE
Confidence 46788888889998876665555666533322334444444444556777776542 2 23445557776
Q ss_pred e
Q 036939 98 S 98 (215)
Q Consensus 98 ~ 98 (215)
+
T Consensus 146 i 146 (307)
T 3s5o_A 146 V 146 (307)
T ss_dssp E
T ss_pred E
Confidence 6
No 88
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=49.82 E-value=29 Score=29.03 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=41.1
Q ss_pred CCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 46 SGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 46 ~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
.-..|-+-|++|+..|.+.+.+... ..+.++++++-|..|+..++++|++..
T Consensus 210 ~~d~v~ftS~~~v~~f~~~~~~~~~-~~l~~~~i~aIG~~Ta~~l~~~G~~~~ 261 (286)
T 1jr2_A 210 VPASITFFSPSGLTYSLKHIQELSG-DNIDQIKFAAIGPTTARALAAQGLPVS 261 (286)
T ss_dssp SCSEEEESSHHHHHHHHHHHHHHHG-GGGGGSEEEESSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEChHHHHHHHHHHhhhcc-ccccCCEEEEECHHHHHHHHHcCCCce
Confidence 4578999999999999998865211 123467899999999999999998754
No 89
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=48.68 E-value=93 Score=26.82 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=44.1
Q ss_pred HHHHHHh--cCcCCCEE-EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC--------
Q 036939 36 AANKSVE--FVKSGMVV-GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH-------- 103 (215)
Q Consensus 36 aA~~A~~--~V~~g~vI-GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~-------- 103 (215)
.|..|++ -+++|+.| =.|+|..=...+ .+++. .| .+.+.++..|.+-..+++++|.. +++..+.
T Consensus 170 ta~~~l~~~~~~~g~~VlV~GaG~vG~~ai-qlak~--~G-a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 170 CCLHGVDLSGIKAGSTVAILGGGVIGLLTV-QLARL--AG-ATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAG 245 (370)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCSHHHHHHH-HHHHH--TT-CSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHS
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHH-HHHHH--cC-CCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHh
Confidence 3444554 56788744 356665444444 44432 22 22467777888888899999987 3332111
Q ss_pred ------CceeEEEecCC
Q 036939 104 ------PVIDLAIDGAD 114 (215)
Q Consensus 104 ------~~iDl~iDGaD 114 (215)
..+|+.||-..
T Consensus 246 ~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 246 PVGLVPGGVDVVIECAG 262 (370)
T ss_dssp TTSSSTTCEEEEEECSC
T ss_pred hhhccCCCCCEEEECCC
Confidence 15888888664
No 90
>3i8o_A KH domain-containing protein MJ1533; APC89320.5, methanocaldococcus jannaschii DSM 2661, structural genomics, PSI-2; 2.64A {Methanocaldococcus jannaschii}
Probab=48.23 E-value=27 Score=27.40 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCc-eeEEE
Q 036939 56 STATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPV-IDLAI 110 (215)
Q Consensus 56 STv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~-iDl~i 110 (215)
..+-..+.+|+.. + +-+++|+...-.+.|+.+|++++.+..-.. .++-+
T Consensus 92 ~~vD~~l~~lA~~-----~-~a~lvTnD~~l~kvA~~~GI~V~~l~~~~~~~~~~~ 141 (142)
T 3i8o_A 92 GEIDAMIRKVAKE-----T-NSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVELVL 141 (142)
T ss_dssp SSHHHHHHHHHHH-----T-TCEEEESCHHHHHHHHHTTCCEEECCCCCCCCCCCC
T ss_pred CcHHHHHHHHHHH-----h-CCEEEcCCHHHHHHHHHcCCEEEEeccccccCCccc
Confidence 4556666667653 2 467899999999999999999999876543 55433
No 91
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=48.21 E-value=14 Score=27.39 Aligned_cols=51 Identities=10% Similarity=0.003 Sum_probs=33.9
Q ss_pred CCCEEE-eCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHH-HHHHHCCCCeeecC
Q 036939 46 SGMVVG-LGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTH-DQAVSLGIPLSDLD 101 (215)
Q Consensus 46 ~g~vIG-LGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~-~~~~~~Gi~v~~l~ 101 (215)
.|+.|+ +|+|..-..+++.|.+ .+.+ ++++..+.+.+ .+++++|.++...+
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~----~g~~-v~v~~r~~~~~~~~a~~~~~~~~~~~ 72 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSY----PQYK-VTVAGRNIDHVRAFAEKYEYEYVLIN 72 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCT----TTCE-EEEEESCHHHHHHHHHHHTCEEEECS
T ss_pred cCCEEEEECCCHHHHHHHHHHHh----CCCE-EEEEcCCHHHHHHHHHHhCCceEeec
Confidence 377666 6999998888877754 2243 77777676655 45677786655443
No 92
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=47.97 E-value=27 Score=28.36 Aligned_cols=47 Identities=21% Similarity=0.119 Sum_probs=39.4
Q ss_pred CCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 46 SGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 46 ~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
.-+.|-+-|+||+..|.+.+. .+.++++++-+..|++.++++|+++.
T Consensus 161 ~~d~v~ftS~s~v~~~~~~~~------~~~~~~~~aIG~~Ta~~l~~~G~~v~ 207 (229)
T 3p9z_A 161 EKSILIFTAISHAKAFLHYFE------FLENYTAISIGNTTALYLQEQGIPSY 207 (229)
T ss_dssp TTCEEEECSHHHHHHHHHHSC------CCTTCEEEESSHHHHHHHHHTTCCEE
T ss_pred CCeEEEEECHHHHHHHHHHhC------cccCCEEEEECHHHHHHHHHcCCCce
Confidence 347899999999999988763 23468899999999999999999864
No 93
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=46.24 E-value=23 Score=26.72 Aligned_cols=63 Identities=10% Similarity=0.200 Sum_probs=40.7
Q ss_pred EEEccc-cHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeeeec
Q 036939 124 VEVVPV-CWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHGMF 195 (215)
Q Consensus 124 VEV~P~-a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~GLF 195 (215)
+.+.|. .+..+.+.|.++ ++++. -.+|-.-|+++-+.+.+ ..+.+++- +.|..+ |||..+--+
T Consensus 74 v~~~~~~~~~~~~~~l~~~-------peV~~~~~vtG~~d~~~~v~~~d-~~~l~~~l~~~l~~~-~gV~~~~t~ 139 (152)
T 2cg4_A 74 IILKSAKDYPSALAKLESL-------DEVTEAYYTTGHYSIFIKVMCRS-IDALQHVLINKIQTI-DEIQSTETL 139 (152)
T ss_dssp EEESSGGGHHHHHHHHHTC-------TTEEEEEEESSSCSEEEEEEESC-HHHHHHHHHHTTTTS-TTEEEEEEE
T ss_pred EEECCCCCHHHHHHHHhCC-------cCeEEEEEEecccCEEEEEEECC-HHHHHHHHHHHhhcC-CCeeEEEEE
Confidence 344443 467788888775 34444 45666669999998764 44555533 466788 999776443
No 94
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=45.94 E-value=1.4e+02 Score=25.51 Aligned_cols=84 Identities=20% Similarity=0.226 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhcC-cCCCEEEeCcChhHHHHHHHHHhHHh---------cC----------CCCCEEEecCc---HHHH
Q 036939 31 ELKKIAANKSVEFV-KSGMVVGLGTDSTATHAVDKIGELLH---------QG----------KLKNIVGIPTS---KTTH 87 (215)
Q Consensus 31 ~~K~~aA~~A~~~V-~~g~vIGLGsGSTv~~~i~~L~~~~~---------~~----------~l~~i~~V~tS---~~t~ 87 (215)
-.|...|..++..+ ++|.++.+||-.+....+.+.+.+.. .| .++++.+|+.- .+.-
T Consensus 54 ~~~L~~A~~~i~~i~~~~~vlfVgTk~~~q~~V~k~A~~~g~~~v~~rwlgGtLTN~~t~~f~~PdllvV~Dp~~d~~ai 133 (252)
T 3u5c_A 54 WEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAI 133 (252)
T ss_dssp HHHHHHHHHHHTTSSSGGGEEEEECSHHHHHHHHHHHHHSSCEEEESCCCTTSSSCTTSTTCCCCSEEEESCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCcHHHHHHHHHHHHhCCceecCcccCCcccChhhhhccCCceEEEeCCccchHHH
Confidence 34555555555555 56789999999999988888876521 11 24566666543 3444
Q ss_pred HHHHHCCCCeeecCCC----CceeEEEecCC
Q 036939 88 DQAVSLGIPLSDLDSH----PVIDLAIDGAD 114 (215)
Q Consensus 88 ~~~~~~Gi~v~~l~~~----~~iDl~iDGaD 114 (215)
.+|..+|||++.+-+. +.+|+.|=|-|
T Consensus 134 ~EA~~l~IP~Ial~DTn~~p~~VD~~IP~Nd 164 (252)
T 3u5c_A 134 KEASYVNIPVIALTDLDSPSEFVDVAIPCNN 164 (252)
T ss_dssp HHHHTTTCCEEEEECTTCCCTTCSSEEECCT
T ss_pred HHHHHcCCCEEEEEcCCCCcccCCEEEeCCC
Confidence 7888999998865222 24666665543
No 95
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=45.37 E-value=57 Score=29.18 Aligned_cols=59 Identities=20% Similarity=0.113 Sum_probs=30.9
Q ss_pred HHHHHHhcCcCCC-EEEe----CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHH-HCCCC
Q 036939 36 AANKSVEFVKSGM-VVGL----GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAV-SLGIP 96 (215)
Q Consensus 36 aA~~A~~~V~~g~-vIGL----GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~-~~Gi~ 96 (215)
+....++.++.+. .+-| |||-|. ++..+.+.+...+...+.+++++...+..++ ..|+.
T Consensus 33 av~~~~~~i~~~~~~~li~G~aGTGKT~--ll~~~~~~l~~~~~~~il~~a~T~~Aa~~l~~~~~~~ 97 (459)
T 3upu_A 33 AFNIVMKAIKEKKHHVTINGPAGTGATT--LTKFIIEALISTGETGIILAAPTHAAKKILSKLSGKE 97 (459)
T ss_dssp HHHHHHHHHHSSSCEEEEECCTTSCHHH--HHHHHHHHHHHTTCCCEEEEESSHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCHHH--HHHHHHHHHHhcCCceEEEecCcHHHHHHHHhhhccc
Confidence 3344444554443 3322 889884 3445544443322235777777777665554 33544
No 96
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=44.81 E-value=41 Score=29.02 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|.|+-||-. .++ ++++.++-+...+-++|+.+
T Consensus 60 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 60 DDERDVLTRTILEHVAGRVPVIVTTSHYSTQV-CAA-RSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHH-HHH-HHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCchHHH-HHH-HHHHHHHcCCCEEEEcCCCC
Confidence 4677888888888875443 34555555543 333 44444443455677777654
No 97
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=44.27 E-value=42 Score=28.60 Aligned_cols=67 Identities=12% Similarity=0.172 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhcCcCC--CEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH-----HH-H----HHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSG--MVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK-----TT-H----DQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g--~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~-----~t-~----~~~~~~Gi~v 97 (215)
.++|+++.+.+++.+... -++|+|+-||-. .++ ++++.++-+-..+-++|+.+ +- . ..++..++|+
T Consensus 52 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPi 129 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANGRVPVIAGAGSNSTAE-AIA-FVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPI 129 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHH-HHH-HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCccHHH-HHH-HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 467778888888877543 356776666643 334 33333333344677777743 11 1 3445557886
Q ss_pred e
Q 036939 98 S 98 (215)
Q Consensus 98 ~ 98 (215)
+
T Consensus 130 i 130 (292)
T 2vc6_A 130 I 130 (292)
T ss_dssp E
T ss_pred E
Confidence 6
No 98
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=43.64 E-value=26 Score=26.71 Aligned_cols=61 Identities=10% Similarity=0.137 Sum_probs=40.5
Q ss_pred EEEcccc--HHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeee
Q 036939 124 VEVVPVC--WKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHG 193 (215)
Q Consensus 124 VEV~P~a--~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~G 193 (215)
+.+.|.. ...+.+.+.++ +.++. -.+|-..||++-+.+.+ ..+.+++- +.|..+ |||..+-
T Consensus 76 v~~~~~~~~~~~~~~~l~~~-------peV~~~~~vtG~~d~~~~v~~~d-~~~l~~~l~~~l~~~-~gV~~~~ 140 (162)
T 2p5v_A 76 VSIRKAKDAREDFAASVRKW-------PEVLSCFALTGETDYLLQAFFTD-MNAFSHFVLDTLLSH-HGVQDAQ 140 (162)
T ss_dssp EEECSSTTHHHHHHHHHTTC-------TTEEEEEEESSSCSEEEEEEESS-HHHHHHHHHHTTTTS-TTEEEEE
T ss_pred EEEcCCchHHHHHHHHHhcC-------hhhhEeeeecCCCCEEEEEEECC-HHHHHHHHHHHhhcC-CCeeEEE
Confidence 4556765 77777777765 33443 35776779999998764 45555543 467788 9996654
No 99
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=42.67 E-value=25 Score=28.84 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=31.7
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCC-CCEEEecCc---HHHHHHHHHCCCCeeec
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKL-KNIVGIPTS---KTTHDQAVSLGIPLSDL 100 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l-~~i~~V~tS---~~t~~~~~~~Gi~v~~l 100 (215)
++..|+|+....++++|.+ +.+ .+|.+|-|. ......|+++|||+..+
T Consensus 8 vl~sG~g~~~~~~l~~l~~----~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~ 59 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKR----GDLPARVALLVCDRPGAKVIERAARENVPAFVF 59 (212)
T ss_dssp EECCSSCHHHHHHHHHHHT----TCCCEEEEEEEESSTTCHHHHHHHHTTCCEEEC
T ss_pred EEEECCcHHHHHHHHHHHh----CCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEe
Confidence 4566999988888887753 322 135444333 35667899999998743
No 100
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=42.65 E-value=31 Score=29.63 Aligned_cols=69 Identities=22% Similarity=0.240 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCcC-CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH----------HHHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKS-GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT----------THDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~-g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~----------t~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+.. ..-|-.|+|++...=+-+++++.++-+...+-++|+.+. -+..++..++|++
T Consensus 59 ~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 138 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVL 138 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 46788888999998876 555555666533333334444444444556777776531 1234455577766
No 101
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=42.63 E-value=9 Score=30.51 Aligned_cols=52 Identities=17% Similarity=0.100 Sum_probs=32.7
Q ss_pred EeCcChhHHHHHHHHHhHHhcCCCCCEEEec----CcHHHHHHHHHCCCCeeecCCCCce
Q 036939 51 GLGTDSTATHAVDKIGELLHQGKLKNIVGIP----TSKTTHDQAVSLGIPLSDLDSHPVI 106 (215)
Q Consensus 51 GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~----tS~~t~~~~~~~Gi~v~~l~~~~~i 106 (215)
.+-||+|+..+++.|.+. |. +.+.+++ .+......+++.|+++.++-..+.+
T Consensus 129 vitTG~Tl~~a~~~L~~~---Ga-~~V~~~~l~~~~~~~~~~~l~~~~~~~~sl~~~~~i 184 (197)
T 1y0b_A 129 FLANGQAAHGLVSIVKQA---GA-SIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSL 184 (197)
T ss_dssp EESSCHHHHHHHHHHHHT---TC-EEEEEEEEEEETTSTHHHHHHHTTCCEEEEEEEEEC
T ss_pred ccccCHHHHHHHHHHHHC---CC-EEEEEEEEEEecccchhhhHHhcCCcEEEEEEEEEe
Confidence 368999999999998653 21 1232222 1224566778889987766544444
No 102
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=42.26 E-value=1.6e+02 Score=24.97 Aligned_cols=83 Identities=16% Similarity=0.130 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhcCc-CCCEEEeCcChhHHHHHHHHHhHHhcC--------------------CCCCEEEecCc---HHHH
Q 036939 32 LKKIAANKSVEFVK-SGMVVGLGTDSTATHAVDKIGELLHQG--------------------KLKNIVGIPTS---KTTH 87 (215)
Q Consensus 32 ~K~~aA~~A~~~V~-~g~vIGLGsGSTv~~~i~~L~~~~~~~--------------------~l~~i~~V~tS---~~t~ 87 (215)
.|...|..++..++ .|.++-+||-......+++.+++...- .++++.+|..- .+.-
T Consensus 51 ~~L~~A~~~i~~i~~~~~iLfVgtk~~~~~~V~~~A~~~g~~yv~~~RWlgG~LTN~~t~~~~~PdlliV~Dp~~e~~ai 130 (241)
T 2xzm_B 51 QKIKLAARVIAAVQHPEDVMVVCSRIYGQRAAIKFAGYTHCKSTSSSRWTPGTLTNYQTLKYEEPRVLIVTDPRSDFQAI 130 (241)
T ss_dssp HHHHHHHHHHHHCSSGGGEEEECCSHHHHHHHHHHHHHHTCBCCCCSSCCTTTTTCTTCTTCCCCSEEEESCTTTTHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHhCCEEeccccccCCcccCccccccCCCCEEEEECCCcchHHH
Confidence 34444544554464 678999999998888877776543211 24566666642 3444
Q ss_pred HHHHHCCCCeeecCCC----CceeEEEecCC
Q 036939 88 DQAVSLGIPLSDLDSH----PVIDLAIDGAD 114 (215)
Q Consensus 88 ~~~~~~Gi~v~~l~~~----~~iDl~iDGaD 114 (215)
.+|..+|||++.+-+. +.+|+.|=|-|
T Consensus 131 ~EA~~l~IPvIalvDTn~~p~~VDy~IP~Nd 161 (241)
T 2xzm_B 131 KEASYVNIPVIALCDSDSPLAYVDVVIPCNN 161 (241)
T ss_dssp HHHTTTTCCEEECCCSSSCCTTCCEECCSCC
T ss_pred HHHHHhCCCEEEEecCCCCcccccEEEeCCC
Confidence 7888999999876332 24555554443
No 103
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=42.10 E-value=26 Score=30.03 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH----------HHHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT----------THDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~----------t~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+....-|-.|+|++...=+-+++++.++-+...+-++|+.+. -+..++..++|++
T Consensus 59 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 137 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMI 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 46788888888888865543444555432222233444444444556777776531 1234445577766
No 104
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.77 E-value=32 Score=29.37 Aligned_cols=68 Identities=16% Similarity=0.086 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhH-HHHHHHHHhHHhcCCCCCEEEecCcHH------H----HHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTA-THAVDKIGELLHQGKLKNIVGIPTSKT------T----HDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv-~~~i~~L~~~~~~~~l~~i~~V~tS~~------t----~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+....-|-.|+|++. ...++ ++++.++-+...+-++|+.+. . +..++..++|++
T Consensus 52 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~-la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 130 (294)
T 2ehh_A 52 FEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVH-LTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPII 130 (294)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHH-HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHH-HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 46788888888888765554445555522 33333 444434434446777777541 1 133455577766
No 105
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=41.24 E-value=1.8e+02 Score=25.41 Aligned_cols=83 Identities=17% Similarity=0.205 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhcC-cCCCEEEeCcChhHHHHHHHHHhHHhc---------C----------CCCCEEEecCc---HHHHH
Q 036939 32 LKKIAANKSVEFV-KSGMVVGLGTDSTATHAVDKIGELLHQ---------G----------KLKNIVGIPTS---KTTHD 88 (215)
Q Consensus 32 ~K~~aA~~A~~~V-~~g~vIGLGsGSTv~~~i~~L~~~~~~---------~----------~l~~i~~V~tS---~~t~~ 88 (215)
.|..-|..++..+ +.|.++-+||-......+++.+.+... | .++++.+|..- .+.-.
T Consensus 56 ~~L~~A~~~i~~i~~~~~ILfVgTk~~aq~~V~k~A~~~g~~yv~~RWlgG~LTN~~t~~f~~PdlliV~Dp~~e~~AI~ 135 (295)
T 2zkq_b 56 EKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLT 135 (295)
T ss_dssp HHHHHHHHHHHHSSCGGGEEEEECSHHHHHHHHHHHHHHCCEEEESSCCCC-CCCTTCSSCCCCSEEEESCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCceecceEecccccCcccccccCCCeEEEeCCCcchhHHH
Confidence 3444455555555 467899999999988888877765321 1 13456666532 34448
Q ss_pred HHHHCCCCeeecC----CCCceeEEEecCC
Q 036939 89 QAVSLGIPLSDLD----SHPVIDLAIDGAD 114 (215)
Q Consensus 89 ~~~~~Gi~v~~l~----~~~~iDl~iDGaD 114 (215)
+|..+|||++.+- +.+.+|+.|=|-|
T Consensus 136 EA~~lgIPvIalvDTn~dp~~VDy~IP~Nd 165 (295)
T 2zkq_b 136 EASYVNLPTIALCNTDSPLRYVDIAIPCNN 165 (295)
T ss_dssp HHHHHTCCEEEEECTTCCCTTCSEEEESCS
T ss_pred HHHHhCCCEEEEecCCCCcccCCEEEeCCC
Confidence 8999999988652 2235666666654
No 106
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=40.43 E-value=1.9e+02 Score=25.46 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhcC-cCCCEEEeCcChhHHHHHHHHHhHHh---------cC----------CCCCEEEecCc---HHHHH
Q 036939 32 LKKIAANKSVEFV-KSGMVVGLGTDSTATHAVDKIGELLH---------QG----------KLKNIVGIPTS---KTTHD 88 (215)
Q Consensus 32 ~K~~aA~~A~~~V-~~g~vIGLGsGSTv~~~i~~L~~~~~---------~~----------~l~~i~~V~tS---~~t~~ 88 (215)
.|.+.|..++..+ +.|.++.+||-.+....+++.+++.. .| .++++.+|+.- .+.-.
T Consensus 60 e~L~~Aa~~I~~i~~~~~ILfVgTk~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN~~t~~f~ePdllvV~Dp~~d~qAI~ 139 (305)
T 3iz6_A 60 EKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIK 139 (305)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEECCSHHHHHHHHHHHHHHTCEEECSCCCTTTTTTTTTSCSSCCSEEEESCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHhCCccccCcccCCcccCcccccccCCceeEEeCcccchHHHH
Confidence 4554555555545 46789999999999888888776532 11 24566666543 34447
Q ss_pred HHHHCCCCeeecCCC----CceeEEEecCC
Q 036939 89 QAVSLGIPLSDLDSH----PVIDLAIDGAD 114 (215)
Q Consensus 89 ~~~~~Gi~v~~l~~~----~~iDl~iDGaD 114 (215)
+|..+|||++.+-+. +.+|+.|=|-|
T Consensus 140 EA~~lnIPtIALvDTnsdp~~VDy~IP~ND 169 (305)
T 3iz6_A 140 ESALGNIPTIAFCDTDSPMRYVDIGIPANN 169 (305)
T ss_dssp HHHHHTCCEEEEECTTSCGGGCSEEEESCC
T ss_pred HHHHcCCCEEEEEcCCCCccccceEEeCCC
Confidence 889999998865322 25777776654
No 107
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=40.36 E-value=33 Score=28.44 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=30.1
Q ss_pred EEeCcChhHHHHHHHHHhHHhcCCCC-CEEEecCc---HHHHHHHHHCCCCeeec
Q 036939 50 VGLGTDSTATHAVDKIGELLHQGKLK-NIVGIPTS---KTTHDQAVSLGIPLSDL 100 (215)
Q Consensus 50 IGLGsGSTv~~~i~~L~~~~~~~~l~-~i~~V~tS---~~t~~~~~~~Gi~v~~l 100 (215)
..=|+||+...++++. ++|.+. .|.+|-|. ....+.|+++|||+..+
T Consensus 8 l~Sg~Gsnl~ali~~~----~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~ 58 (211)
T 3p9x_A 8 FASGSGTNAEAIIQSQ----KAGQLPCEVALLITDKPGAKVVERVKVHEIPVCAL 58 (211)
T ss_dssp ECCTTCHHHHHHHHHH----HTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEEC
T ss_pred EEeCCchHHHHHHHHH----HcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEe
Confidence 3447888877776655 445552 35554433 35667899999997643
No 108
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=40.34 E-value=1.5e+02 Score=25.83 Aligned_cols=57 Identities=23% Similarity=0.174 Sum_probs=34.9
Q ss_pred HHHHHHh----cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 36 AANKSVE----FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 36 aA~~A~~----~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
.|..|+. -+++|+. +=+|+|. +-.++=.|++. .| ...+.++..|.+-..+++++|..
T Consensus 199 ta~~al~~~~~~~~~g~~VlV~GaG~-vG~~aiqlak~--~G-a~~Vi~~~~~~~~~~~~~~lGa~ 260 (404)
T 3ip1_A 199 VAYNAVIVRGGGIRPGDNVVILGGGP-IGLAAVAILKH--AG-ASKVILSEPSEVRRNLAKELGAD 260 (404)
T ss_dssp HHHHHHTTTSCCCCTTCEEEEECCSH-HHHHHHHHHHH--TT-CSEEEEECSCHHHHHHHHHHTCS
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHH--cC-CCEEEEECCCHHHHHHHHHcCCC
Confidence 3556652 3678874 4457664 44444444432 22 32466777788888899999976
No 109
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=40.18 E-value=34 Score=29.20 Aligned_cols=60 Identities=18% Similarity=0.140 Sum_probs=41.7
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCCCceeEEEe
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSHPVIDLAID 111 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~~~iDl~iD 111 (215)
..++=||+|-+...++..|.+. | ..++++.-+.+-++.++++|+...++++....|+.|-
T Consensus 119 k~vlvlGaGGaaraia~~L~~~---G--~~v~V~nRt~~ka~~la~~~~~~~~~~~l~~~DiVIn 178 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ---G--LQVSVLNRSSRGLDFFQRLGCDCFMEPPKSAFDLIIN 178 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---T--CEEEEECSSCTTHHHHHHHTCEEESSCCSSCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC---C--CEEEEEeCCHHHHHHHHHCCCeEecHHHhccCCEEEE
Confidence 3567789999999999998753 3 3688887666555444477877777666655566553
No 110
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=40.04 E-value=1.2e+02 Score=25.40 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=41.7
Q ss_pred cCcCCCEEEe-C-cChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC------------Ccee
Q 036939 43 FVKSGMVVGL-G-TDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH------------PVID 107 (215)
Q Consensus 43 ~V~~g~vIGL-G-sGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~------------~~iD 107 (215)
.+++|+.|-+ | +|..=..+++.+.. .| . .+.++..|.+-..+++++|.. +++..+. ..+|
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~---~G-a-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKA---LG-A-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHH---HT-C-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHH---CC-C-EEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 4678886665 6 55555555554432 23 2 476777777777888888875 3333221 2588
Q ss_pred EEEecCCc
Q 036939 108 LAIDGADE 115 (215)
Q Consensus 108 l~iDGaDe 115 (215)
+.||-+..
T Consensus 212 vvid~~g~ 219 (325)
T 3jyn_A 212 VVYDGVGQ 219 (325)
T ss_dssp EEEESSCG
T ss_pred EEEECCCh
Confidence 88886654
No 111
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=39.78 E-value=28 Score=30.03 Aligned_cols=52 Identities=19% Similarity=0.173 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhcCcCCCE--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGMV--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+....- +|+|+.||- ..++ ++++.++-+...+-++|+.
T Consensus 67 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~-~ai~-la~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 67 DGEKIELLRAVLEAVGDRARVIAGAGTYDTA-HSIR-LAKACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECCCSCHH-HHHH-HHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCCCCCHH-HHHH-HHHHHHHcCCCEEEECCCC
Confidence 46677788888887765543 444444442 2333 3333333234456667665
No 112
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=39.43 E-value=17 Score=30.37 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=40.5
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
-..|-+-|+||+..|.+.+.+... .+.++++++-|..|++.++++|++..-
T Consensus 194 ~d~v~ftS~s~v~~~~~~~~~~~~--~l~~~~~~aIG~~Ta~~l~~~G~~~~~ 244 (269)
T 3re1_A 194 LNGLVVSSGQGFEHLLQLAGDSWP--DLAGLPLFVPSPRVASLAQAAGARNVI 244 (269)
T ss_dssp CCEEECSSHHHHTTTHHHHGGGHH--HHTTSCEEESSHHHHHHHHHHTCSSEE
T ss_pred CCEEEEcCHHHHHHHHHHhhHHHH--HHhCCeEEEECHHHHHHHHHCCCCceE
Confidence 368889999999999998865311 133577899999999999999998553
No 113
>1stz_A Heat-inducible transcription repressor HRCA homol; circe element, structural genomics, BSGC structure FUN NIH, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.51 d.110.2.3
Probab=39.19 E-value=4.8 Score=35.68 Aligned_cols=42 Identities=7% Similarity=-0.110 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH
Q 036939 31 ELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT 85 (215)
Q Consensus 31 ~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~ 85 (215)
++|+++|+.|++ +|+ +.|+|+.++++.|++. . ++++|+++..
T Consensus 100 ~eK~~Ia~~aa~---~~~----d~gtt~~~~a~~Ls~~-~-----~~tvv~~~~~ 141 (338)
T 1stz_A 100 EADLAVETFKSM---PLA----DPEKVLFLAGNLLARL-T-----EGYVLIERPN 141 (338)
T ss_dssp CCCHHHHTCCCT---TBC----CHHHHHHHHHHHHHHH-H-----TCEEEEECCC
T ss_pred HHHHHHHHHHhh---cCC----CHHHHHHHHHHHHhcc-C-----CeEEEEeCCH
Confidence 458888887765 555 8999999999999763 2 5776666664
No 114
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=39.14 E-value=86 Score=25.35 Aligned_cols=58 Identities=28% Similarity=0.421 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHHHhc--CcCCC-E--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 27 LTQDELKKIAANKSVEF--VKSGM-V--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~--V~~g~-v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
.+.++..++.....++. +++|+ + ||-|+|..+.++++..+ . .+++|-.|......+++
T Consensus 43 ~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~-~v~gvd~s~~~~~~a~~ 105 (287)
T 1kpg_A 43 MTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD-------V-NVVGLTLSKNQANHVQQ 105 (287)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC-------C-EEEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC-------C-EEEEEECCHHHHHHHHH
Confidence 34555555555666665 35665 4 56667777766665432 2 58899998887766654
No 115
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=39.13 E-value=1.2e+02 Score=25.79 Aligned_cols=76 Identities=17% Similarity=0.207 Sum_probs=44.7
Q ss_pred HHHHHHh--cCcCCC-EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC--------
Q 036939 36 AANKSVE--FVKSGM-VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH-------- 103 (215)
Q Consensus 36 aA~~A~~--~V~~g~-vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~-------- 103 (215)
.|..|++ -+++|+ ++=+|+|..=...++ +++. .| ...+.++.++.+-..+++++|.. +++..+.
T Consensus 154 ta~~al~~~~~~~g~~VlV~GaG~vG~~a~q-la~~--~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 154 TGFHGAELANIKLGDTVCVIGIGPVGLMSVA-GANH--LG-AGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILK 229 (352)
T ss_dssp HHHHHHHHTTCCTTCCEEEECCSHHHHHHHH-HHHT--TT-CSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHH--cC-CcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHH
Confidence 3455555 457776 444577654444444 4432 23 32577888888778889999976 3322111
Q ss_pred ----CceeEEEecCCc
Q 036939 104 ----PVIDLAIDGADE 115 (215)
Q Consensus 104 ----~~iDl~iDGaDe 115 (215)
..+|+.||-...
T Consensus 230 ~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 230 ATDGKGVDKVVIAGGD 245 (352)
T ss_dssp HTTTCCEEEEEECSSC
T ss_pred HcCCCCCCEEEECCCC
Confidence 148888886543
No 116
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=39.03 E-value=38 Score=29.16 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhcCCCCCEEEecCcHH------H----HHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQGKLKNIVGIPTSKT------T----HDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~~~l~~i~~V~tS~~------t----~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+....-|-.|+|++ +...++ ++++.++-+...+-++|+.+. . ...++..++|++
T Consensus 68 ~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~-la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 146 (304)
T 3cpr_A 68 AAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVE-LAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPIC 146 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHH-HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHH-HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 4567788888888776544444555542 233333 343334434445777777541 1 133455577766
No 117
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=38.91 E-value=86 Score=25.74 Aligned_cols=58 Identities=24% Similarity=0.418 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHHHhc--CcCCC-E--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 27 LTQDELKKIAANKSVEF--VKSGM-V--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~--V~~g~-v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
.+.++..++.....++. +++|+ + ||-|+|..+.++++..+ . .+++|-.|......+++
T Consensus 51 ~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-------~-~v~gvD~s~~~~~~a~~ 113 (302)
T 3hem_A 51 MTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-------V-NVIGLTLSENQYAHDKA 113 (302)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-------C-EEEEEECCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-------C-EEEEEECCHHHHHHHHH
Confidence 34555555555555554 46775 3 57777777766665442 2 58899998877665544
No 118
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=38.67 E-value=31 Score=29.42 Aligned_cols=54 Identities=19% Similarity=0.221 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+....-|-.|+|++ +...++ ++++.++-+-..+-++|+.+
T Consensus 52 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~-la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIE-LSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHH-HHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHH-HHHHHHhcCCCEEEECCCCC
Confidence 4678888888888876555444555542 233333 33333332344577777654
No 119
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.40 E-value=32 Score=29.85 Aligned_cols=68 Identities=21% Similarity=0.166 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhcCCCCCEEEecCcH-----H-----HHHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQGKLKNIVGIPTSK-----T-----THDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~~~l~~i~~V~tS~-----~-----t~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+....-|-.|+|++ +...++ ++++.++-+...+-++|+.+ + -+..+...++|++
T Consensus 75 ~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~-la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 153 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVA-LTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQI 153 (314)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHH-HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHH-HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 4677888888888876544333455542 233333 34444443455677777633 1 1234455577766
No 120
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=37.96 E-value=20 Score=33.52 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcC
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTD 55 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsG 55 (215)
...++.+|++|++.++||++|-||-|
T Consensus 260 ~~~~~~Ia~raA~el~dG~~vnlGIG 285 (481)
T 3k6m_A 260 DNVRERIIKRAALEFEDGMYANLGIG 285 (481)
T ss_dssp --CHHHHHHHHGGGCCTTEEEEECTT
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEccC
Confidence 35688999999999999999999999
No 121
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.94 E-value=32 Score=29.60 Aligned_cols=54 Identities=4% Similarity=-0.044 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+....-|-.|+|++ +...++ +++..++-+...+-++|+.+
T Consensus 63 ~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~-la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQ-LAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHH-HHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHH-HHHHHHhCCCCEEEecCCCC
Confidence 4677788888888876555444455542 233333 33333332344577777654
No 122
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=37.60 E-value=33 Score=29.49 Aligned_cols=53 Identities=15% Similarity=0.220 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|+|+-||- ..++ ++++.++-+...+-++|+.+
T Consensus 64 ~eEr~~v~~~~~~~~~grvpViaGvg~~~t~-~ai~-la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 64 SEEKVALYRHVVSVVDKRVPVIAGTGSNNTH-ASID-LTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSCHH-HHHH-HHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCHH-HHHH-HHHHHHhcCCCEEEEcCCCC
Confidence 4677788888888776544 3444444443 3333 33333433344577777653
No 123
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=37.56 E-value=28 Score=30.26 Aligned_cols=69 Identities=17% Similarity=0.170 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH------H----HHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT------T----HDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~------t----~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+....-|-.|+|++...-+-+++++.++-+...+-++|+.+. . +..+...++|++
T Consensus 74 ~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 152 (315)
T 3si9_A 74 HEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPII 152 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 46777888888888765543444555432222233444444434456777776531 1 233445577766
No 124
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=37.43 E-value=47 Score=28.35 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHH-----------HHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT-----------HDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t-----------~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+.. -++|.|+-||-. .++ ++++.++-+...+-++|+.+.- ...++..++|++
T Consensus 51 ~eEr~~v~~~~~~~~~g-viaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPii 127 (293)
T 1w3i_A 51 PEEKLENLKAVYDVTNK-IIFQVGGLNLDD-AIR-LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVY 127 (293)
T ss_dssp HHHHHHHHHHHHTTCSC-EEEECCCSCHHH-HHH-HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHcCC-EEEecCCCCHHH-HHH-HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEE
Confidence 46788888999998875 445555555543 333 4444444445567777765421 133455577766
No 125
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=37.41 E-value=35 Score=29.12 Aligned_cols=53 Identities=13% Similarity=0.233 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|+|+-||- ..++ ++++.++-+...+-++|+.+
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~-~ai~-la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 53 ETERKETIKFVIDKVNKRIPVIAGTGSNNTA-ASIA-MSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHH-HHHH-HHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCcccHH-HHHH-HHHHHHhcCCCEEEEcCCCC
Confidence 3567778888888775443 3444444443 3333 33333443444577777764
No 126
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=37.33 E-value=1.9e+02 Score=24.52 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=44.3
Q ss_pred HHHHHH-h--cCcCCCEEEe--CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC------
Q 036939 36 AANKSV-E--FVKSGMVVGL--GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH------ 103 (215)
Q Consensus 36 aA~~A~-~--~V~~g~vIGL--GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~------ 103 (215)
.|..|+ + .+++|..|-+ |+|..=..+++.+.. .| . .+.++..|.+-...++++|.. +++..+.
T Consensus 154 ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~---~G-a-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~ 228 (353)
T 4dup_A 154 TVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARA---FG-A-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAVI 228 (353)
T ss_dssp HHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHH---TT-C-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHH---cC-C-EEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHH
Confidence 355555 2 4688886665 445555555554432 23 3 477777777777888888876 3333222
Q ss_pred -----CceeEEEecCC
Q 036939 104 -----PVIDLAIDGAD 114 (215)
Q Consensus 104 -----~~iDl~iDGaD 114 (215)
..+|+.||-+.
T Consensus 229 ~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 229 KAETGQGVDIILDMIG 244 (353)
T ss_dssp HHHHSSCEEEEEESCC
T ss_pred HHHhCCCceEEEECCC
Confidence 14788888664
No 127
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=37.08 E-value=33 Score=29.30 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhH-HHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTA-THAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv-~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+....-|-.|+|++. ...++ ++++.++-+...+-++|+.+
T Consensus 56 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~-la~~a~~~Gadavlv~~P~y 110 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVE-LGKYATELGYDCLSAVTPFY 110 (293)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHH-HHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHH-HHHHHHhcCCCEEEECCCCC
Confidence 35677788888887765554445555522 33333 33333332344576777654
No 128
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=37.07 E-value=55 Score=29.05 Aligned_cols=64 Identities=13% Similarity=0.185 Sum_probs=41.0
Q ss_pred CCCEE-EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHH-HHHHHCCCCeeecCCC----CceeEEEecC
Q 036939 46 SGMVV-GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTH-DQAVSLGIPLSDLDSH----PVIDLAIDGA 113 (215)
Q Consensus 46 ~g~vI-GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~-~~~~~~Gi~v~~l~~~----~~iDl~iDGa 113 (215)
+|+.| =+|+|..-..+++.|... | .+.++++..+..-+ .+++++|...++.++. ...|+.|+..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~---G-~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at 235 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDR---G-VRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSAT 235 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH---C-CSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECC
T ss_pred cCCEEEEEChHHHHHHHHHHHHHC---C-CCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEcc
Confidence 56654 469999999999988653 3 33577777776654 6777888765433221 2356666553
No 129
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=37.04 E-value=39 Score=28.72 Aligned_cols=66 Identities=11% Similarity=0.187 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHH-----------HHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT-----------HDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t-----------~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+.. -++|.|+-||-. .++ ++++.++-+...+-++|+.+.- ...++..++|++
T Consensus 50 ~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPii 126 (286)
T 2r91_A 50 LQEKMELTDAATSAARR-VIVQVASLNADE-AIA-LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVF 126 (286)
T ss_dssp HHHHHHHHHHHHHHCSS-EEEECCCSSHHH-HHH-HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHhCC-EEEeeCCCCHHH-HHH-HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 46788888999988875 445555555533 333 4444444344457777765421 133455577766
No 130
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=36.83 E-value=30 Score=25.87 Aligned_cols=57 Identities=9% Similarity=0.134 Sum_probs=38.7
Q ss_pred cccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHH-HHHccccCeEEeee
Q 036939 128 PVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVAS-NRILRLIAGVVEHG 193 (215)
Q Consensus 128 P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~-~~L~~i~pGVVe~G 193 (215)
|.....+.+.+.++ +.+.. -.+|-..|+++-+...+ ..+.+++- +.|..+ |||..+-
T Consensus 75 ~~~~~~~~~~l~~~-------p~V~~~~~~tG~~d~~~~v~~~d-~~~l~~~l~~~l~~~-~gV~~~~ 133 (150)
T 2pn6_A 75 KNYHVELGNKLAQI-------PGVWGVYFVLGDNDFIVMARYKT-REEFMEKFLERVMSI-PEVERTS 133 (150)
T ss_dssp TTHHHHHHHHHHTS-------TTEEEEEECSSSCSEEEEEEESS-HHHHHHHTHHHHTTC-TTEEEEE
T ss_pred hhHHHHHHHHHhcC-------chhhhhhhhcCcCCEEEEEEECC-HHHHHHHHHHHhccC-CCeeEEE
Confidence 56778888888775 23333 35666779999998764 44555544 677889 9996654
No 131
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=36.67 E-value=33 Score=29.25 Aligned_cols=53 Identities=9% Similarity=0.248 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|.|+-||- ..++ ++++.++-+-..+-++|+.+
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~-~ai~-la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADGRIPVIAGTGANATA-EAIS-LTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHH-HHHH-HHHHTTTSSCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCccHH-HHHH-HHHHHHhcCCCEEEECCCCC
Confidence 3677788888888776543 3444444443 3333 44444443444577777754
No 132
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=36.13 E-value=24 Score=33.14 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=29.2
Q ss_pred HHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 33 KKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
++++|+++++++++|+++-||.| .-..++..|.+
T Consensus 288 ~~~Ia~~~A~~i~dG~~v~lGiG-iP~av~~~l~~ 321 (531)
T 2ahu_A 288 RKLVARRALFEMRKGAVGNVGVG-IADGIGLVARE 321 (531)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSS-TTTTHHHHHHH
T ss_pred HHHHHHHHHHhccCCCEEEecCc-HHHHHHHHHHh
Confidence 78899999999999999999999 66667777765
No 133
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=36.08 E-value=42 Score=28.61 Aligned_cols=52 Identities=6% Similarity=0.128 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.. -++|.|+-||-. .++ ++++.++-+-..+-++|+.+
T Consensus 51 ~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~y 102 (288)
T 2nuw_A 51 KDEKRQNLNALYDVTHK-LIFQVGSLNLND-VME-LVKFSNEMDILGVSSHSPYY 102 (288)
T ss_dssp HHHHHHHHHHHTTTCSC-EEEECCCSCHHH-HHH-HHHHHHTSCCSEEEECCCCS
T ss_pred HHHHHHHHHHHHHHhCC-eEEeeCCCCHHH-HHH-HHHHHHhcCCCEEEEcCCcC
Confidence 46788888999998876 445555555533 333 44444443444577777654
No 134
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.95 E-value=29 Score=29.59 Aligned_cols=68 Identities=10% Similarity=0.106 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhcCCCCCEEEecCcHH----------HHHHHHHCCCCee
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQGKLKNIVGIPTSKT----------THDQAVSLGIPLS 98 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~~~l~~i~~V~tS~~----------t~~~~~~~Gi~v~ 98 (215)
.++|+++.+.+++.+....-|-.|+|++ +...++ ++++.++-+...+-++|+.+. -+..++..++|++
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~-la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 131 (291)
T 3tak_A 53 MEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIE-LTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLI 131 (291)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHH-HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHH-HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 4677888888888886554444455542 233333 333333333446777776531 1234455578866
No 135
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=35.94 E-value=44 Score=29.92 Aligned_cols=54 Identities=13% Similarity=-0.018 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+....-|-.|+|++...-+-+++++.++-+...+-++|+.
T Consensus 111 ~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 111 WDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 164 (360)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 356667777777777654444445554222222233333333334456666643
No 136
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=35.53 E-value=2e+02 Score=24.12 Aligned_cols=72 Identities=17% Similarity=0.143 Sum_probs=42.8
Q ss_pred HHHHHh--cCcCCCEEE-eCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCCC--------
Q 036939 37 ANKSVE--FVKSGMVVG-LGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSHP-------- 104 (215)
Q Consensus 37 A~~A~~--~V~~g~vIG-LGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~~-------- 104 (215)
|..|++ .+++|+.|- .|+|..=..+++ +++. .| . .+.++..|.+-..+++++|.. +++..+.+
T Consensus 155 a~~~l~~~~~~~g~~VlV~GaG~vG~~a~q-la~~--~G-a-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 155 VYKGLKVTDTRPGQWVVISGIGGLGHVAVQ-YARA--MG-L-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKE 229 (340)
T ss_dssp HHHHHHTTTCCTTSEEEEECCSTTHHHHHH-HHHH--TT-C-EEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCHHHHHHHH-HHHH--CC-C-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHh
Confidence 455555 457887443 566654444444 4332 23 3 477777788888899999976 34333221
Q ss_pred --ceeEEEecC
Q 036939 105 --VIDLAIDGA 113 (215)
Q Consensus 105 --~iDl~iDGa 113 (215)
..|+.||-+
T Consensus 230 ~g~~d~vid~~ 240 (340)
T 3s2e_A 230 IGGAHGVLVTA 240 (340)
T ss_dssp HSSEEEEEESS
T ss_pred CCCCCEEEEeC
Confidence 467888754
No 137
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=35.41 E-value=29 Score=29.64 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+.... ++|+|+.||-. .++ ++++.++-+...+-++|+.
T Consensus 54 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~-ai~-la~~a~~~Gadavlv~~P~ 107 (292)
T 3daq_A 54 TDEKELILKTVIDLVDKRVPVIAGTGTNDTEK-SIQ-ASIQAKALGADAIMLITPY 107 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSCHHH-HHH-HHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCcccHHH-HHH-HHHHHHHcCCCEEEECCCC
Confidence 4677788888888876543 45555555533 333 3333333234457777765
No 138
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=35.23 E-value=93 Score=26.94 Aligned_cols=51 Identities=12% Similarity=0.090 Sum_probs=32.2
Q ss_pred cCCCEEEe---CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeec
Q 036939 45 KSGMVVGL---GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDL 100 (215)
Q Consensus 45 ~~g~vIGL---GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l 100 (215)
++|..|-+ |+|..=...++.+..+ | . .+.++..|.+-..+++++|.. +++.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~---G-a-~Vi~~~~~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD---G-I-KLVNIVRKQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH---T-C-CEEEEESSHHHHHHHHHTTCSCEEET
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC---C-C-EEEEEECCHHHHHHHHhCCCcEEEeC
Confidence 67764444 6666655555544322 3 3 477777788888889999976 4443
No 139
>1ucr_A Protein DSVD; dissimilatory sulfite reductase D, DNA binding motif, sulfate-reducing bacteria, winged-helix motif, unknown function; 1.20A {Desulfovibrio vulgaris} SCOP: a.4.5.45 PDB: 1wq2_A
Probab=34.72 E-value=3.3 Score=29.77 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=22.9
Q ss_pred HHHHHHHHH-hcCcCCCEEEeCcChhHHHHHH
Q 036939 33 KKIAANKSV-EFVKSGMVVGLGTDSTATHAVD 63 (215)
Q Consensus 33 K~~aA~~A~-~~V~~g~vIGLGsGSTv~~~i~ 63 (215)
|.+.+..++ ++|..|.....-||||..|-+.
T Consensus 35 k~r~vKK~~~~LV~Eg~leywSSGSTTmyglk 66 (78)
T 1ucr_A 35 KQREVKKILTALVNDEVLEYWSSGSTTMYGLK 66 (78)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEETTEEEEEET
T ss_pred CHHHHHHHHHHHHhcCceEEEecCCeEEEecC
Confidence 444444455 4999999999999999876443
No 140
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=34.55 E-value=84 Score=25.48 Aligned_cols=58 Identities=7% Similarity=0.006 Sum_probs=45.3
Q ss_pred HHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 40 SVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 40 A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
++..+.+-+.|-.=|...|.+|.+.+.+... .++++++.+-...|+..++++|++...
T Consensus 52 ~l~~l~~~d~vifTS~~aV~~~~~~l~~~~~--~~~~~~i~aVG~~Ta~~L~~~G~~~~~ 109 (254)
T 4es6_A 52 LMLDLDRYCAVVVVSKPAARLGLERLDRYWP--QPPQQTWCSVGAATAAILEAYGLDVTY 109 (254)
T ss_dssp HHHTGGGCSEEEECSHHHHHHHHHHHHHHCS--SCCSCEEEESSHHHHHHHHHHTCCEEC
T ss_pred HHHhccCCCEEEEECHHHHHHHHHHHHHhCC--CcccCEEEEECHHHHHHHHHcCCCccc
Confidence 3344567789999999999999998865422 133578999999999999999998653
No 141
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=34.49 E-value=1e+02 Score=25.52 Aligned_cols=49 Identities=14% Similarity=0.202 Sum_probs=34.8
Q ss_pred cCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH--HHHHHHHCCCCee
Q 036939 45 KSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT--THDQAVSLGIPLS 98 (215)
Q Consensus 45 ~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~--t~~~~~~~Gi~v~ 98 (215)
+...++=+|+|.....-++.|.+ .|. ++++|++... ...++++.++.++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~---~GA--~VtVvap~~~~~l~~l~~~~~i~~i 80 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ---EGA--AITVVAPTVSAEINEWEAKGQLRVK 80 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG---GCC--CEEEECSSCCHHHHHHHHTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCC--EEEEECCCCCHHHHHHHHcCCcEEE
Confidence 45678999999999999988865 342 6999987653 3344555566655
No 142
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=34.40 E-value=28 Score=30.26 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+....-|-.|+|++...=+-+++++.++-+...+-++|++
T Consensus 63 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 116 (318)
T 3qfe_A 63 REERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPA 116 (318)
T ss_dssp HHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 467888888888888654434445554322222334433333334467777774
No 143
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=34.36 E-value=1.9e+02 Score=24.20 Aligned_cols=57 Identities=9% Similarity=0.147 Sum_probs=35.0
Q ss_pred HHHHHh----cCcCCCEE-EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCe
Q 036939 37 ANKSVE----FVKSGMVV-GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPL 97 (215)
Q Consensus 37 A~~A~~----~V~~g~vI-GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v 97 (215)
|..|+. .+++|..| =+|+|..=... -.|++.. |.. .+.++..|.+-..+++++|...
T Consensus 158 a~~~l~~~~~~~~~g~~vlv~GaG~vG~~a-~qla~~~--g~~-~Vi~~~~~~~~~~~~~~lGa~~ 219 (345)
T 3jv7_A 158 PYHAISRVLPLLGPGSTAVVIGVGGLGHVG-IQILRAV--SAA-RVIAVDLDDDRLALAREVGADA 219 (345)
T ss_dssp HHHHHHTTGGGCCTTCEEEEECCSHHHHHH-HHHHHHH--CCC-EEEEEESCHHHHHHHHHTTCSE
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHH-HHHHHHc--CCC-EEEEEcCCHHHHHHHHHcCCCE
Confidence 445544 46788754 44665544444 4444322 223 4777778888889999999773
No 144
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=34.19 E-value=2.1e+02 Score=24.36 Aligned_cols=74 Identities=23% Similarity=0.250 Sum_probs=43.6
Q ss_pred HHHHHH-h--cCcCCC-EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC-------
Q 036939 36 AANKSV-E--FVKSGM-VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH------- 103 (215)
Q Consensus 36 aA~~A~-~--~V~~g~-vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~------- 103 (215)
.|..|+ + -+++|+ ++=+|+|..=..+++ +++. .| . .+.++..|.+-..+++++|.. +++-+..
T Consensus 176 ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~q-la~~--~G-a-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~ 250 (363)
T 3uog_A 176 TAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ-IAKA--TG-A-EVIVTSSSREKLDRAFALGADHGINRLEEDWVERVY 250 (363)
T ss_dssp HHHHHHTTTTCCCTTCEEEEESSBHHHHHHHH-HHHH--TT-C-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHH--cC-C-EEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHH
Confidence 355565 2 467887 445576654444444 4332 23 3 477777777777889999976 3331111
Q ss_pred -----CceeEEEecCC
Q 036939 104 -----PVIDLAIDGAD 114 (215)
Q Consensus 104 -----~~iDl~iDGaD 114 (215)
..+|+.||-+.
T Consensus 251 ~~~~g~g~D~vid~~g 266 (363)
T 3uog_A 251 ALTGDRGADHILEIAG 266 (363)
T ss_dssp HHHTTCCEEEEEEETT
T ss_pred HHhCCCCceEEEECCC
Confidence 15788888654
No 145
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=34.12 E-value=35 Score=29.22 Aligned_cols=53 Identities=19% Similarity=0.119 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|.|+-||-. .++ ++++.++-+...+-++|+.+
T Consensus 55 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~y 109 (294)
T 3b4u_A 55 SRERQAILSSFIAAGIAPSRIVTGVLVDSIED-AAD-QSAEALNAGARNILLAPPSY 109 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEECCSSHHH-HHH-HHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCccHHH-HHH-HHHHHHhcCCCEEEEcCCcC
Confidence 4677888888888876433 45555555433 333 33333333344566666653
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=33.73 E-value=1.3e+02 Score=21.54 Aligned_cols=48 Identities=13% Similarity=0.186 Sum_probs=37.1
Q ss_pred CEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeec
Q 036939 48 MVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDL 100 (215)
Q Consensus 48 ~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l 100 (215)
.++=+|.|..-..+++.|.++ | . +++++-.+.+....+++.|.+++..
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~---g-~-~V~~id~~~~~~~~~~~~~~~~~~g 55 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA---G-K-KVLAVDKSKEKIELLEDEGFDAVIA 55 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT---T-C-CEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHC---C-C-eEEEEECCHHHHHHHHHCCCcEEEC
Confidence 577789999888888888653 3 3 6999999888888888888776543
No 147
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=33.71 E-value=54 Score=27.46 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec-------C-----cHHHHHHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP-------T-----SKTTHDQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~-------t-----S~~t~~~~~~~Gi~v 97 (215)
++.-+.+.++|.++==+.-+|.=-||.|+..+++.+ ++ ++.+|+ + +.++++.+++.|+++
T Consensus 37 ~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~-----~~---~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V 108 (206)
T 1t57_A 37 ERVLELVGERADQLGIRNFVVASVSGETALRLSEMV-----EG---NIVSVTHHAGFREKGQLELEDEARDALLERGVNV 108 (206)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTC-----CS---EEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHc-----cC---CEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEE
Confidence 444455666666652236788889999998777744 22 578887 3 788899999999998
Q ss_pred eec
Q 036939 98 SDL 100 (215)
Q Consensus 98 ~~l 100 (215)
+.-
T Consensus 109 ~t~ 111 (206)
T 1t57_A 109 YAG 111 (206)
T ss_dssp ECC
T ss_pred EEe
Confidence 753
No 148
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=33.54 E-value=81 Score=26.04 Aligned_cols=57 Identities=14% Similarity=0.034 Sum_probs=44.9
Q ss_pred HHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 40 SVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 40 A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
++..+.+...|-.=|...|.+|.+.+.+... .++++++.+-...|+..++++|++..
T Consensus 60 ~l~~l~~~d~vifTS~naV~~~~~~l~~~~~--~~~~~~i~aVG~~Ta~aL~~~G~~~~ 116 (269)
T 3re1_A 60 IIFELLNYSAVIVVSKPAARLAIELIDEVWP--QPPMQPWFSVGSATGQILLDYGLDAS 116 (269)
T ss_dssp HHHTGGGSSEEEECSHHHHHHHHHHHHHHCS--SCCCSCEEESSHHHHHHHHHTTCCEE
T ss_pred HHHhccCCCEEEEECHHHHHHHHHHHHHhCC--CcccCEEEEECHHHHHHHHHcCCCcc
Confidence 4445577889999999999999998865422 13346789999999999999999865
No 149
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=33.52 E-value=2.2e+02 Score=24.14 Aligned_cols=74 Identities=15% Similarity=0.216 Sum_probs=44.0
Q ss_pred HHHHHh----cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC-------
Q 036939 37 ANKSVE----FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH------- 103 (215)
Q Consensus 37 A~~A~~----~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~------- 103 (215)
|..|+. .+++|+. +=+|.|. +-.++=.+++.. .| . .+.++..|.+-..+++++|.. +++..+.
T Consensus 173 a~~al~~~~~~~~~g~~VlV~GaG~-vG~~avqlak~~-~G-a-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~ 248 (359)
T 1h2b_A 173 AYRAVKKAARTLYPGAYVAIVGVGG-LGHIAVQLLKVM-TP-A-TVIALDVKEEKLKLAERLGADHVVDARRDPVKQVME 248 (359)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCSH-HHHHHHHHHHHH-CC-C-EEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHH
T ss_pred HHHHHHhhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-CC-C-eEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHH
Confidence 445543 3677874 4457764 544444454432 13 3 477777788878889999976 4443221
Q ss_pred ---C-ceeEEEecCC
Q 036939 104 ---P-VIDLAIDGAD 114 (215)
Q Consensus 104 ---~-~iDl~iDGaD 114 (215)
. .+|+.||-.-
T Consensus 249 ~~~g~g~Dvvid~~G 263 (359)
T 1h2b_A 249 LTRGRGVNVAMDFVG 263 (359)
T ss_dssp HTTTCCEEEEEESSC
T ss_pred HhCCCCCcEEEECCC
Confidence 1 5888888654
No 150
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=33.27 E-value=28 Score=33.55 Aligned_cols=34 Identities=24% Similarity=0.502 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcC--------cCCCEEEeCcChhHHHHHHHHH
Q 036939 33 KKIAANKSVEFV--------KSGMVVGLGTDSTATHAVDKIG 66 (215)
Q Consensus 33 K~~aA~~A~~~V--------~~g~vIGLGsGSTv~~~i~~L~ 66 (215)
-...|..+++|+ ++|++||+|+|-+..-=.-+|+
T Consensus 418 DL~fAw~v~K~vkSNaIv~akdg~tvGiGaGQ~sRV~~~rlA 459 (593)
T 1g8m_A 418 DLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLA 459 (593)
T ss_dssp HHHHHHHHHHTSCSSCEEEEETTEEEEEECSCSCHHHHHHHH
T ss_pred HHHHHHHHHHhcCcceEEEEECCeEEEECCCCCchHHHHHHH
Confidence 345789999988 5888999999988755444554
No 151
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=32.88 E-value=34 Score=29.72 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+.... ++|+|+-+|-. .++ ++++.++-+...+-++|+.
T Consensus 76 ~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAK-TVR-RAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHH-HHH-HHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHH-HHH-HHHHHHhcCCCEEEECCCC
Confidence 3567777788887775443 44555444433 223 3333333334456666664
No 152
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=32.85 E-value=67 Score=27.23 Aligned_cols=41 Identities=12% Similarity=0.099 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHhcCc------CCCEEEeCcChhHHHHHHHHHhH
Q 036939 28 TQDELKKIAANKSVEFVK------SGMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V~------~g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
+.+++-+.+|+..++.++ ..-+|||-+|||-..+-++|.++
T Consensus 31 ~~~~l~~~~A~~i~~~i~~ai~~~~~~~l~LsgGstP~~~y~~L~~~ 77 (268)
T 3ico_A 31 DSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ 77 (268)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHH
T ss_pred CcchhhhhhcchhhhHhHHHHHhcCceEEEEecCCchhHHHHHHHHH
Confidence 456666666665555443 34589999999999999999863
No 153
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=32.78 E-value=34 Score=29.47 Aligned_cols=53 Identities=15% Similarity=0.295 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|+|+-||-. .++ ++++.++-+-..+-++|+.+
T Consensus 64 ~eEr~~vi~~~~~~~~grvpViaGvg~~st~~-ai~-la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDGKIPVIVGAGTNSTEK-TLK-LVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSCHHH-HHH-HHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEcCCCccHHH-HHH-HHHHHHhcCCCEEEECCCCC
Confidence 4677888888888776443 34555544433 333 33333332344577777654
No 154
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=32.63 E-value=2.3e+02 Score=24.15 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcC-cCCCEEEeCcChhHHHHHHHHHhHHhc-------------------CCCCCEEEecCc---HHHHH
Q 036939 32 LKKIAANKSVEFV-KSGMVVGLGTDSTATHAVDKIGELLHQ-------------------GKLKNIVGIPTS---KTTHD 88 (215)
Q Consensus 32 ~K~~aA~~A~~~V-~~g~vIGLGsGSTv~~~i~~L~~~~~~-------------------~~l~~i~~V~tS---~~t~~ 88 (215)
.|..-|..++..+ +.|.++-+||-......+++.+++... -.++++.+|..- .+.-.
T Consensus 89 ~~L~~A~~~i~~~~~~~~iLfVgTk~~aq~~V~~~A~~~g~~yv~~RWlgG~LTN~~~~~f~~PdlliV~Dp~~e~~AI~ 168 (253)
T 3bch_A 89 EKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLT 168 (253)
T ss_dssp HHHHHHHHHHHTCSSGGGEEEEECSHHHHHHHHHHHHHHCCEEEESCCCTTTTTCCSCSTTCSCSEEEESCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHhCCeeecceecCCcccCccccccCCCCEEEEECCCccchHHH
Confidence 3444444444455 467899999999988888887765321 124566666532 33448
Q ss_pred HHHHCCCCeeecCCC----CceeEEEecCC
Q 036939 89 QAVSLGIPLSDLDSH----PVIDLAIDGAD 114 (215)
Q Consensus 89 ~~~~~Gi~v~~l~~~----~~iDl~iDGaD 114 (215)
+|..+|||++.+-+. +.+|+.|=|-|
T Consensus 169 EA~~lgIPvIalvDTn~dp~~VDy~IP~Nd 198 (253)
T 3bch_A 169 EASYVNLPTIALCNTDSPLRYVDIAIPCNN 198 (253)
T ss_dssp HHHHTTCCEEEEECTTCCCTTCSEEEESCC
T ss_pred HHHHhCCCEEEEEcCCCCcccCceEeecCC
Confidence 899999998865222 24555555543
No 155
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.56 E-value=51 Score=28.46 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+ ...-|-.|+|++...=+-+++++.++-+...+-++|+.
T Consensus 60 ~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 60 AAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 467888888888888 44444445554222222234433333334456666654
No 156
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=32.43 E-value=14 Score=27.87 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=39.3
Q ss_pred EccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeEEee
Q 036939 126 VVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGVVEH 192 (215)
Q Consensus 126 V~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGVVe~ 192 (215)
+.|.....+.+.+.++ +.++. -.+|-..|+++-+.+.+ ..+.+++-++|..+ +||+.+
T Consensus 76 ~~~~~~~~~~~~l~~~-------p~V~~~~~~~G~~d~~~~v~~~~-~~~l~~~l~~l~~~-~gv~~~ 134 (150)
T 2w25_A 76 LDPSQPDDAPARLEHI-------EEVESCYSVAGEASYVLLVRVAS-ARALEDLLQRIRTT-ANVRTR 134 (150)
T ss_dssp SCTTSCCCHHHHHTTC-------TTEEEEEEESSSCSEEEEEEESS-HHHHHHHHHHHHHH-HTEEEE
T ss_pred cCCCCHHHHHHHHhcC-------cCeEEEEEeECCCCEEEEEEECC-HHHHHHHHHHHhhc-CCcceE
Confidence 3355556667777765 23333 35676779999998875 56666666778888 999774
No 157
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=32.25 E-value=59 Score=28.55 Aligned_cols=40 Identities=35% Similarity=0.451 Sum_probs=25.7
Q ss_pred cCCCEEEeCcChhHHHHHHHHHhHHhc---------------CCCCCEEEecCcHHH
Q 036939 45 KSGMVVGLGTDSTATHAVDKIGELLHQ---------------GKLKNIVGIPTSKTT 86 (215)
Q Consensus 45 ~~g~vIGLGsGSTv~~~i~~L~~~~~~---------------~~l~~i~~V~tS~~t 86 (215)
+...+||+|+||+.- +++.++..... ..+ .+..|||..-|
T Consensus 98 ~~d~IIavGGGsv~D-~AK~iA~~~~~~~~~~~~~~~~~~~~~~~-p~i~IPTTagt 152 (371)
T 1o2d_A 98 SFDFVVGLGGGSPMD-FAKAVAVLLKEKDLSVEDLYDREKVKHWL-PVVEIPTTAGT 152 (371)
T ss_dssp CCSEEEEEESHHHHH-HHHHHHHHTTSTTCCSGGGGCGGGCCCCC-CEEEEECSSCC
T ss_pred CCCEEEEeCChHHHH-HHHHHHHHHhCCCCCHHHHhcccCCCCCC-eEEEEeCCCch
Confidence 566899999999753 44655543321 234 47888887544
No 158
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=32.25 E-value=1.4e+02 Score=25.17 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=42.5
Q ss_pred HHHHh--cCcCCCEE-EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeec--CCC-CceeEEEe
Q 036939 38 NKSVE--FVKSGMVV-GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDL--DSH-PVIDLAID 111 (215)
Q Consensus 38 ~~A~~--~V~~g~vI-GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l--~~~-~~iDl~iD 111 (215)
..|++ -+++|+.| =.|+|.. -.++-.+++. .| . .+.++..|.+-..+++++|...+.- +.+ ..+|+.||
T Consensus 166 ~~~l~~~~~~~g~~VlV~GaG~v-G~~a~qla~~--~G-a-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid 240 (348)
T 3two_A 166 YSPLKFSKVTKGTKVGVAGFGGL-GSMAVKYAVA--MG-A-EVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIIS 240 (348)
T ss_dssp HHHHHHTTCCTTCEEEEESCSHH-HHHHHHHHHH--TT-C-EEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCcHH-HHHHHHHHHH--CC-C-eEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEE
Confidence 44544 46788743 3577644 4444444432 23 3 4777777777778899999774321 111 15888888
Q ss_pred cCCc
Q 036939 112 GADE 115 (215)
Q Consensus 112 GaDe 115 (215)
-...
T Consensus 241 ~~g~ 244 (348)
T 3two_A 241 TIPT 244 (348)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 6543
No 159
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=32.16 E-value=82 Score=27.08 Aligned_cols=62 Identities=15% Similarity=0.241 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCcCC-CEEEeCcChh---------------HHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCe
Q 036939 34 KIAANKSVEFVKSG-MVVGLGTDST---------------ATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPL 97 (215)
Q Consensus 34 ~~aA~~A~~~V~~g-~vIGLGsGST---------------v~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v 97 (215)
..+-+.|.++++.| .+|=+|.-|| +..+++.|.+.. +. .+.+=|...++++.|-+.|.++
T Consensus 38 ~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~---~~-piSIDT~~~~va~aAl~aGa~i 113 (282)
T 1aj0_A 38 IDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF---EV-WISVDTSKPEVIRESAKVGAHI 113 (282)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC---CC-EEEEECCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc---CC-eEEEeCCCHHHHHHHHHcCCCE
Confidence 34556778899999 4888888666 445555554321 34 3778889999999999999887
Q ss_pred ee
Q 036939 98 SD 99 (215)
Q Consensus 98 ~~ 99 (215)
+.
T Consensus 114 IN 115 (282)
T 1aj0_A 114 IN 115 (282)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 160
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=31.61 E-value=39 Score=29.56 Aligned_cols=53 Identities=17% Similarity=0.222 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhcCcCCCE--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGMV--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+....- +|+|+-||-. .++ ++++.++-+...+-++|+.+
T Consensus 86 ~eEr~~vi~~~ve~~~grvpViaGvg~~st~e-ai~-la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 86 REERRRAIEAAATILRGRRTLMAGIGALRTDE-AVA-LAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEECCSSHHH-HHH-HHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHH-HHH-HHHHHHhcCCCEEEECCCCC
Confidence 35677788888887765443 4555444432 333 33333332344566666653
No 161
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=31.31 E-value=69 Score=27.34 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=38.6
Q ss_pred cCcCCCEEEeCcChhHHHHHHHHHhHHhcC-----CCCCEEE---ecCc----------HHHHHHHHHCCCCeee
Q 036939 43 FVKSGMVVGLGTDSTATHAVDKIGELLHQG-----KLKNIVG---IPTS----------KTTHDQAVSLGIPLSD 99 (215)
Q Consensus 43 ~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~-----~l~~i~~---V~tS----------~~t~~~~~~~Gi~v~~ 99 (215)
++++|+++|+|+|-.....+++++...+.. ...++.+ ++.| .+|-+.|++.|+.-+-
T Consensus 175 vv~~~~~~~iea~~gt~~~~~r~~~~~~~~~~~~~~~~g~~~k~~k~~qD~~fd~P~iG~dti~~~~~ag~~~iv 249 (283)
T 4ggi_A 175 VVCEGLVLAVEAQEGTDAMLRRVADLPEAIRGRAERRLGVLAKAPKPIQETRVALPTIGVATIHRAARAGLAGIV 249 (283)
T ss_dssp EEETTEEEEECSSSCHHHHHHHHHHSCGGGSCBTTBCCCEEEECCCCC---CCCCCEECHHHHHHHHHTTCCEEE
T ss_pred EecCCeEEEecCccchHHHHHHHHHHHHhhhccccccccceecccccccccccCCccccHHHHHHHHHcCCeEEE
Confidence 348999999999999999999987642211 0011111 2222 6888999999999653
No 162
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=30.89 E-value=1.8e+02 Score=24.36 Aligned_cols=69 Identities=14% Similarity=0.257 Sum_probs=42.6
Q ss_pred cCcCCCEEEe-CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC------------CceeE
Q 036939 43 FVKSGMVVGL-GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH------------PVIDL 108 (215)
Q Consensus 43 ~V~~g~vIGL-GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~------------~~iDl 108 (215)
.+++|..|-+ |+|+.+-.++-.++.. .| . .+.++..|.+-...++++|.. +++..+. ..+|+
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~--~G-a-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQI--LN-F-RLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHH--HT-C-EEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHH--cC-C-EEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcE
Confidence 5678876554 6665666655555542 23 2 466777677777788888876 3333221 25888
Q ss_pred EEecCCc
Q 036939 109 AIDGADE 115 (215)
Q Consensus 109 ~iDGaDe 115 (215)
.||-+..
T Consensus 217 vid~~g~ 223 (340)
T 3gms_A 217 AIDSIGG 223 (340)
T ss_dssp EEESSCH
T ss_pred EEECCCC
Confidence 8886653
No 163
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=30.09 E-value=1e+02 Score=25.64 Aligned_cols=45 Identities=27% Similarity=0.355 Sum_probs=29.5
Q ss_pred CCEEEeCc-ChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 47 GMVVGLGT-DSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 47 g~vIGLGs-GSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
|.++=.|. |..=..+++ |++. .| . .+.++..|.+-..+++++|..
T Consensus 148 g~VlV~Ga~G~vG~~aiq-la~~--~G-a-~Vi~~~~~~~~~~~~~~lGa~ 193 (324)
T 3nx4_A 148 GEVVVTGASGGVGSTAVA-LLHK--LG-Y-QVAAVSGRESTHGYLKSLGAN 193 (324)
T ss_dssp CCEEESSTTSHHHHHHHH-HHHH--TT-C-CEEEEESCGGGHHHHHHHTCS
T ss_pred CeEEEECCCcHHHHHHHH-HHHH--cC-C-EEEEEeCCHHHHHHHHhcCCC
Confidence 67887887 544444444 4432 23 3 477777777778888999876
No 164
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=30.09 E-value=40 Score=31.52 Aligned_cols=66 Identities=20% Similarity=0.229 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcC--------cCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec----CcHHHHHHHHHCCCCee
Q 036939 33 KKIAANKSVEFV--------KSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP----TSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 33 K~~aA~~A~~~V--------~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~----tS~~t~~~~~~~Gi~v~ 98 (215)
-...|.++++|+ ++|++||+|+|-+..-=.-+|+-.......++...-+ +=-++-..+.+.|++-+
T Consensus 354 DL~FAwkv~K~vKSNAIv~akdg~tvGiGaGQ~sRV~s~riA~~kA~~~~~G~vlASDAFFPF~D~v~~aa~aGv~aI 431 (464)
T 1zcz_A 354 DLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAV 431 (464)
T ss_dssp HHHHHHHHHHHSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHHGGGGTTCEEEESSCCSSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhhcccceEEEEeCCeEEEECCCCCchHHHHHHHHHHhhcccCCeEEEecccCCchhhHHHHHHhCCeEE
Confidence 345689999887 5788999999988765545554322211112222211 12356677888888744
No 165
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=30.07 E-value=40 Score=29.69 Aligned_cols=53 Identities=19% Similarity=0.293 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcH
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSK 84 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~ 84 (215)
.++|+++.+.+++.+.... ++|+|+-||-. .++ ++++.++-+...+-++|+.+
T Consensus 83 ~eEr~~vi~~~ve~~~grvpViaGvg~~st~e-ai~-la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 83 AEERKAIARFAIDHVDRRVPVLIGTGGTNARE-TIE-LSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCSSCHHH-HHH-HHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHH-HHH-HHHHHHhcCCCEEEECCCCC
Confidence 3567778888888776443 34555444433 333 33333332344576777653
No 166
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=29.87 E-value=79 Score=25.79 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=31.0
Q ss_pred EEEe--CcChhHHHHHHHHHhHHhcCCCC-CEE-EecCc--HHHHHHHHHCCCCeeec
Q 036939 49 VVGL--GTDSTATHAVDKIGELLHQGKLK-NIV-GIPTS--KTTHDQAVSLGIPLSDL 100 (215)
Q Consensus 49 vIGL--GsGSTv~~~i~~L~~~~~~~~l~-~i~-~V~tS--~~t~~~~~~~Gi~v~~l 100 (215)
++-+ |+|+....++++|.+ +++. ++. +|++. ....+.|+++|||+..+
T Consensus 4 I~vl~SG~g~~~~~~l~~l~~----~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~ 57 (216)
T 2ywr_A 4 IGVLVSGRGSNLQAIIDAIES----GKVNASIELVISDNPKAYAIERCKKHNVECKVI 57 (216)
T ss_dssp EEEEECSCCHHHHHHHHHHHT----TSSCEEEEEEEESCTTCHHHHHHHHHTCCEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHh----CCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEe
Confidence 4456 999988888887753 3331 243 44443 34557799999998743
No 167
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=29.37 E-value=35 Score=29.30 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH------H----HHHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT------T----HDQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~------t----~~~~~~~Gi~v 97 (215)
.++|+++.+.+++.+.... ++|.|+-||-. .++ ++++.++-+...+-++|+.+. . ...+...++|+
T Consensus 52 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~-ai~-la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 129 (297)
T 2rfg_A 52 EEEHKRVVALVAEQAQGRVPVIAGAGSNNPVE-AVR-YAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPI 129 (297)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHH-HHH-HHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEccCCCCHHH-HHH-HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 3677888888888775433 45666555543 333 333333323445777776541 1 13345557776
Q ss_pred e
Q 036939 98 S 98 (215)
Q Consensus 98 ~ 98 (215)
+
T Consensus 130 i 130 (297)
T 2rfg_A 130 I 130 (297)
T ss_dssp E
T ss_pred E
Confidence 6
No 168
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=29.32 E-value=63 Score=26.34 Aligned_cols=23 Identities=35% Similarity=0.475 Sum_probs=18.6
Q ss_pred cCCCE--EEeCcChhHHHHHHHHHh
Q 036939 45 KSGMV--VGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 45 ~~g~v--IGLGsGSTv~~~i~~L~~ 67 (215)
-+|.| +|||.|.|--++-+.+.+
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~ 64 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQG 64 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCS
T ss_pred CCCceEEecCCCChhHHHHHHhCCC
Confidence 47876 899999999888776654
No 169
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=29.23 E-value=1.2e+02 Score=25.70 Aligned_cols=62 Identities=15% Similarity=0.166 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCcCC-CEEEeCcChh-------HHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHC--CCCeee
Q 036939 34 KIAANKSVEFVKSG-MVVGLGTDST-------ATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSL--GIPLSD 99 (215)
Q Consensus 34 ~~aA~~A~~~V~~g-~vIGLGsGST-------v~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~--Gi~v~~ 99 (215)
..+.+.|.++++.| .+|=+|.+|+ +..+++.|.+.. .. .+-+=|+..++++.+.+. |-+++.
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~---~~-pisIDT~~~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV---DL-PCCLDSTNPDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC---CC-CEEEECSCHHHHHHHHHHCCSCCEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC---CC-eEEEeCCCHHHHHHHHHhCCCCCEEE
Confidence 34556777888888 5888888884 555666665431 34 477888888999888777 888763
No 170
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=29.08 E-value=2.5e+02 Score=23.37 Aligned_cols=56 Identities=16% Similarity=0.210 Sum_probs=38.5
Q ss_pred HHHHHh--cCcCCC-EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 37 ANKSVE--FVKSGM-VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 37 A~~A~~--~V~~g~-vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
|..+++ -+++|+ ++=+|+|+....++..++.. +.. .+.++..|.+-..+++++|..
T Consensus 152 a~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~---~g~-~Vi~~~~~~~r~~~~~~~Ga~ 210 (348)
T 4eez_A 152 TYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNV---FGA-KVIAVDINQDKLNLAKKIGAD 210 (348)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHT---SCC-EEEEEESCHHHHHHHHHTTCS
T ss_pred EEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHh---CCC-EEEEEECcHHHhhhhhhcCCe
Confidence 444554 467887 45568888888777766532 233 477777788778889999876
No 171
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=29.05 E-value=68 Score=27.69 Aligned_cols=53 Identities=8% Similarity=0.072 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCcCCCEEEeCcChh-HHHHHHHHHhHHhc-CCCCCEEEecCc
Q 036939 30 DELKKIAANKSVEFVKSGMVVGLGTDST-ATHAVDKIGELLHQ-GKLKNIVGIPTS 83 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~vIGLGsGST-v~~~i~~L~~~~~~-~~l~~i~~V~tS 83 (215)
.++|+++.+.+++.+....-|-.|+|++ +...++ ++++.++ |....+-++|+.
T Consensus 59 ~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~-la~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 59 HDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIE-FVKEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHH-HHHHHHHSCCCSEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHH-HHHHHHhcCCCcEEEEcCCC
Confidence 4678888899999887655444455542 233333 4444444 433457777754
No 172
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=28.92 E-value=74 Score=26.55 Aligned_cols=41 Identities=12% Similarity=0.227 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHhcC------cCCCEEEeCcChhHHHHHHHHHhH
Q 036939 28 TQDELKKIAANKSVEFV------KSGMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V------~~g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
+.+++-+.+|+.-++.+ +..-+|||-+|||-..+-++|.++
T Consensus 15 ~~~~l~~~~A~~i~~~i~~a~~~~~~~~l~LsgGstP~~~y~~L~~~ 61 (251)
T 3tx2_A 15 DTDALVTAAGDRLASAITGALAERGKAMIVLTGGGTGIALLKHLRDV 61 (251)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhh
Confidence 45555555555555544 334589999999999999999864
No 173
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=28.85 E-value=44 Score=26.90 Aligned_cols=51 Identities=16% Similarity=0.141 Sum_probs=30.8
Q ss_pred EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCC
Q 036939 51 GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDS 102 (215)
Q Consensus 51 GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~ 102 (215)
.+-||+|+..+++.|.+...+ ...-.+.+.-+......+++.|+++.++-.
T Consensus 120 vitTG~Tl~~a~~~L~~~Ga~-~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~ 170 (205)
T 2wns_A 120 VVTSGSSVLETVEVLQKEGLK-VTDAIVLLDREQGGKDKLQAHGIRLHSVCT 170 (205)
T ss_dssp EESSSHHHHHHHHHHHHTTCB-CCEEEEEEECCSSHHHHHHTTTCEEEEEEE
T ss_pred eccccHHHHHHHHHHHHCCCE-EEEEEEEEEcCcchHHHHHHcCCeEEEEEE
Confidence 478999999999998653221 111122333333445566778888877644
No 174
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=28.78 E-value=63 Score=27.91 Aligned_cols=69 Identities=20% Similarity=0.165 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhcCcCCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH-----H-----HHHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT-----T-----HDQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~-----t-----~~~~~~~Gi~v 97 (215)
.++|+++.+.+++.+.... ++|+|+ ||-. .++. +++.++-+-..+-++|+.+. - ...++..++|+
T Consensus 64 ~eEr~~vi~~~~~~~~grvpViaGvg~-st~~-ai~l-a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 140 (314)
T 3d0c_A 64 IEEAKQVATRVTELVNGRATVVAGIGY-SVDT-AIEL-GKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPS 140 (314)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEECS-SHHH-HHHH-HHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEecCCc-CHHH-HHHH-HHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 4667778888888776443 457776 5543 4443 33333333445777776531 1 13345557776
Q ss_pred eecC
Q 036939 98 SDLD 101 (215)
Q Consensus 98 ~~l~ 101 (215)
+-.+
T Consensus 141 ilYn 144 (314)
T 3d0c_A 141 IIYF 144 (314)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6444
No 175
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=28.67 E-value=2.2e+02 Score=24.33 Aligned_cols=63 Identities=14% Similarity=0.234 Sum_probs=41.2
Q ss_pred HHHHHHHhcCcCC-CEEEeCcChh------------HHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 35 IAANKSVEFVKSG-MVVGLGTDST------------ATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 35 ~aA~~A~~~V~~g-~vIGLGsGST------------v~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
.+-+.|.++++.| .+|=+|.-|| ...++..+.. +++.+. .+.+=|...++++.|-+.|..++.
T Consensus 30 ~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~-l~~~~~-piSIDT~~~~va~aAl~aGa~iIN 105 (280)
T 1eye_A 30 DAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKE-LAAQGI-TVSIDTMRADVARAALQNGAQMVN 105 (280)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHH-HHHTTC-CEEEECSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHH-hhcCCC-EEEEeCCCHHHHHHHHHcCCCEEE
Confidence 3456778899999 4888887565 2223333322 222245 488889999999999999998773
No 176
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=28.52 E-value=2.6e+02 Score=23.47 Aligned_cols=55 Identities=16% Similarity=0.124 Sum_probs=33.1
Q ss_pred HHHHHh--cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 37 ANKSVE--FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 37 A~~A~~--~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
|..|++ -+++|+. +=+|+|..=..+++ ++.. .| . .+.++..|.+-..+++++|..
T Consensus 157 a~~al~~~~~~~g~~VlV~GaG~vG~~a~q-la~~--~G-a-~Vi~~~~~~~~~~~~~~lGa~ 214 (352)
T 1e3j_A 157 GVHACRRAGVQLGTTVLVIGAGPIGLVSVL-AAKA--YG-A-FVVCTARSPRRLEVAKNCGAD 214 (352)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSHHHHHHHH-HHHH--TT-C-EEEEEESCHHHHHHHHHTTCS
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHH--cC-C-EEEEEcCCHHHHHHHHHhCCC
Confidence 445554 4678874 34566644444444 4432 12 3 366677788878889999976
No 177
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.49 E-value=31 Score=29.65 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhcCcCC--CEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHH----------HHHHHHHCCCCe
Q 036939 30 DELKKIAANKSVEFVKSG--MVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKT----------THDQAVSLGIPL 97 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V~~g--~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~----------t~~~~~~~Gi~v 97 (215)
.++|+++.+.+++.+... -++|+|+-||-. .++ ++++.++-+...+-++|+.+. -+..+...++|+
T Consensus 56 ~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~-ai~-la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPi 133 (300)
T 3eb2_A 56 TAQREAVVRATIEAAQRRVPVVAGVASTSVAD-AVA-QAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPV 133 (300)
T ss_dssp HHHHHHHHHHHHHHHTTSSCBEEEEEESSHHH-HHH-HHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHH-HHH-HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCE
Confidence 467888888888887654 355666555543 333 333333323446777777641 234455567887
Q ss_pred e
Q 036939 98 S 98 (215)
Q Consensus 98 ~ 98 (215)
+
T Consensus 134 i 134 (300)
T 3eb2_A 134 V 134 (300)
T ss_dssp E
T ss_pred E
Confidence 6
No 178
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=28.24 E-value=31 Score=27.12 Aligned_cols=50 Identities=12% Similarity=0.044 Sum_probs=31.3
Q ss_pred EeCcChhHHHHHHHHHhHHhcCCCCCEEE---ecCcHHHHHHHHHCCCCeeecCCCC
Q 036939 51 GLGTDSTATHAVDKIGELLHQGKLKNIVG---IPTSKTTHDQAVSLGIPLSDLDSHP 104 (215)
Q Consensus 51 GLGsGSTv~~~i~~L~~~~~~~~l~~i~~---V~tS~~t~~~~~~~Gi~v~~l~~~~ 104 (215)
-+-||+|...+++.|.+... +.+.+ +--.......+++.|+++.++-..+
T Consensus 123 vitTG~Tl~~~~~~L~~~Ga----~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~ 175 (180)
T 2p1z_A 123 TTTTGNSPLTAVKALREAGA----EVVGVATVVDRATGAADVIAAEGLEYRYILGLE 175 (180)
T ss_dssp ECSSSHHHHHHHHHHHHHTC----EEEEEEEEEC-CCCHHHHHHTTTCCEEEEECST
T ss_pred ccCCcHHHHHHHHHHHHcCC----eEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHH
Confidence 37899999999999976422 12222 2222233455666899988875554
No 179
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=28.12 E-value=78 Score=26.02 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=31.9
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCCC-CEEEecCc---HHHHHHHHHCCCCeeecC
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKLK-NIVGIPTS---KTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l~-~i~~V~tS---~~t~~~~~~~Gi~v~~l~ 101 (215)
++.-|+||....+++++. ++.+. +|.+|-|. ....+.|+++|||+..++
T Consensus 12 vl~SG~gsnl~all~~~~----~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~ 64 (209)
T 4ds3_A 12 IFISGGGSNMEALIRAAQ----APGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFK 64 (209)
T ss_dssp EEESSCCHHHHHHHHHHT----STTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred EEEECCcHHHHHHHHHHH----cCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeC
Confidence 456799999888887763 34442 35544432 233468999999987543
No 180
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=28.07 E-value=45 Score=26.42 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=34.3
Q ss_pred EEEeC--cChhHHHHHHHHHhHHhcCCCCCEEEecCc------HHHHHHHHHCCCCeeecC
Q 036939 49 VVGLG--TDSTATHAVDKIGELLHQGKLKNIVGIPTS------KTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 49 vIGLG--sGSTv~~~i~~L~~~~~~~~l~~i~~V~tS------~~t~~~~~~~Gi~v~~l~ 101 (215)
++||| .|.+...+.+.+.+.+++.++. +.++.|- .....+++++|+|+..++
T Consensus 12 vvGIGcrrg~~~~~i~~ai~~aL~~~gl~-v~~lATid~K~dE~gL~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 12 VAGIGCRKGAASDAIIAAVRAAERAFGVT-VDYLATAPLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHHTCC-CCEEEESSCCSCCHHHHHHHHHTTCCEEECC
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHHCCCC-eEEEEchhhhCCCHHHHHHHHHhCCCeEEEC
Confidence 56666 4577777777776666655564 6666654 244567888899988653
No 181
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=27.97 E-value=31 Score=27.09 Aligned_cols=50 Identities=8% Similarity=0.081 Sum_probs=29.2
Q ss_pred EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecC
Q 036939 51 GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 51 GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~ 101 (215)
-+.||+|+..+++.|.++-.+ ...-.+++.-.......+++.|+++.++-
T Consensus 115 vitTG~Tl~~~~~~L~~~Ga~-~v~~~~l~~r~~~~~~~l~~~g~~~~sl~ 164 (178)
T 2yzk_A 115 VATTGTSIAKSIEVLRSNGYT-VGTALVLVDRGEGAGELLARMGVRLVSVA 164 (178)
T ss_dssp EESSSHHHHHHHHHHHHTTCE-EEEEEEEEECCSSHHHHHHTTTCEEEEEE
T ss_pred ccCCcHHHHHHHHHHHHcCCe-EEEEEEEEEcCcCHHHHHHHcCCcEEEEe
Confidence 478999999999998753221 01111222222244555677788877653
No 182
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=27.86 E-value=55 Score=27.00 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHhcC------cCCCEEEeCcChhHHHHHHHHHh
Q 036939 28 TQDELKKIAANKSVEFV------KSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V------~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
+.+++-+.+|+..++.+ +..-+|||-+|||-..+-++|.+
T Consensus 10 ~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~~ 55 (232)
T 3lhi_A 10 NAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQ 55 (232)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHh
Confidence 34555455554443322 34458999999999999999874
No 183
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=27.74 E-value=75 Score=24.65 Aligned_cols=54 Identities=17% Similarity=0.233 Sum_probs=34.6
Q ss_pred CEEEeC--cChhHHHHHHHHHhHHhcCCCC--CEEEecCc------HHHHHHHHHCCCCeeecC
Q 036939 48 MVVGLG--TDSTATHAVDKIGELLHQGKLK--NIVGIPTS------KTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 48 ~vIGLG--sGSTv~~~i~~L~~~~~~~~l~--~i~~V~tS------~~t~~~~~~~Gi~v~~l~ 101 (215)
-++|+| .|.+...+.+.+.+.+.+.++. .|.++.|- .....+++++|+|+..++
T Consensus 12 lvvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 12 LIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeC
Confidence 478887 4667777777776666554442 45555554 345577788898877653
No 184
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=27.65 E-value=1.2e+02 Score=25.91 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhcCcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEec-CcHHHHHHHHHCCCCeeecCCCCcee
Q 036939 29 QDELKKIAANKSVEFVKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIP-TSKTTHDQAVSLGIPLSDLDSHPVID 107 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~-tS~~t~~~~~~~Gi~v~~l~~~~~iD 107 (215)
+.+.-|.+++.+.+-+.....+ +=||.-..++++..+.. +.+=+..++ ++.-.-++|+++|++++-+-.-+++.
T Consensus 176 HNAlDKliG~~l~~g~~~~~~~-~~SgR~S~EmV~Kaa~a----GIpvlvS~SApTslAV~lA~~~giTLiGf~R~~r~~ 250 (268)
T 2pw9_A 176 HNAVDKVLGSILLGRASNNSAV-YTTGRLTSDMVLKCARI----GIPIIMSRTSPSSLGLALAKRSGATLVAYSRPERIN 250 (268)
T ss_dssp HHHHHHHHHHHHTTSSCSSSEE-EESSCBCHHHHHHHHHH----TCCEEEESSCBCHHHHHHHHHHTCEEEEEEETTEEE
T ss_pred hHHHHHHHHHHHHcCCCcCCcE-EEecCchHHHHHHHHHc----CCCEEEEcccccHHHHHHHHHcCCEEEEEecCCceE
Confidence 6677888899888877777778 99999999999887643 243122222 12223367889999998766666777
Q ss_pred EE
Q 036939 108 LA 109 (215)
Q Consensus 108 l~ 109 (215)
+|
T Consensus 251 vY 252 (268)
T 2pw9_A 251 VF 252 (268)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 185
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=27.51 E-value=1.6e+02 Score=25.04 Aligned_cols=73 Identities=15% Similarity=0.107 Sum_probs=42.1
Q ss_pred HHHHHh--cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC--------C
Q 036939 37 ANKSVE--FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH--------P 104 (215)
Q Consensus 37 A~~A~~--~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~--------~ 104 (215)
|..|+. -+++|.. +=+|.|..=..+++ +++. .| . .+.++..|.+-..+++++|.. +++..+. .
T Consensus 168 a~~~l~~~~~~~g~~VlV~GaG~vG~~~~q-lak~--~G-a-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~ 242 (360)
T 1piw_A 168 VYSPLVRNGCGPGKKVGIVGLGGIGSMGTL-ISKA--MG-A-ETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFD 242 (360)
T ss_dssp HHHHHHHTTCSTTCEEEEECCSHHHHHHHH-HHHH--HT-C-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCS
T ss_pred HHHHHHHcCCCCCCEEEEECCCHHHHHHHH-HHHH--CC-C-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhc
Confidence 344443 4677874 44566554444444 3332 12 2 366776677777788888876 3433221 2
Q ss_pred ceeEEEecCC
Q 036939 105 VIDLAIDGAD 114 (215)
Q Consensus 105 ~iDl~iDGaD 114 (215)
.+|+.||-+-
T Consensus 243 ~~D~vid~~g 252 (360)
T 1piw_A 243 TFDLIVVCAS 252 (360)
T ss_dssp CEEEEEECCS
T ss_pred CCCEEEECCC
Confidence 5899999654
No 186
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=27.30 E-value=85 Score=25.15 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=41.6
Q ss_pred CcCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 44 VKSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 44 V~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
+.+-+.|-.=|...|.+|.+.+.+ .+++.++.+-...|+..++++|+...
T Consensus 48 l~~~d~viftS~~aV~~~~~~l~~-----~l~~~~~~aVG~~Ta~~L~~~G~~~~ 97 (240)
T 3mw8_A 48 LSRADILIFISTSAVSFATPWLKD-----QWPKATYYAVGDATADALALQGITAE 97 (240)
T ss_dssp HTTCSEEEECSHHHHHHHHHHHTT-----CCCSSEEEESSHHHHHHHHHTTCCCE
T ss_pred hcCCCEEEEECHHHHHHHHHHHHh-----hCcCCeEEEECHHHHHHHHHcCCCCc
Confidence 356788999999999999988753 24568899999999999999999753
No 187
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.28 E-value=1.8e+02 Score=22.77 Aligned_cols=34 Identities=15% Similarity=0.039 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhcCcC--CCEEEeCcChhHHHHHH
Q 036939 29 QDELKKIAANKSVEFVKS--GMVVGLGTDSTATHAVD 63 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~--g~vIGLGsGSTv~~~i~ 63 (215)
.+..|..+..-|-++.+- |-.|- .||.|..++-+
T Consensus 19 ~D~dK~~~v~~ak~~~~ll~Gf~l~-AT~gTa~~L~e 54 (152)
T 1b93_A 19 HDHCKQMLMSWVERHQPLLEQHVLY-ATGTTGNLISR 54 (152)
T ss_dssp CGGGHHHHHHHHHHTHHHHTTSEEE-EETTHHHHHHH
T ss_pred ehhhHHHHHHHHHHHHHHhCCCEEE-EccHHHHHHHH
Confidence 345677777777777665 76553 78889877755
No 188
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=27.08 E-value=1.2e+02 Score=24.12 Aligned_cols=57 Identities=23% Similarity=0.372 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHhcC--cCCC-E--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 28 TQDELKKIAANKSVEFV--KSGM-V--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V--~~g~-v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
+..+..+......++.+ ++++ + ||-|+|..+.++++.. + . .++++-.|......+++
T Consensus 41 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------~-~-~v~gvD~s~~~~~~a~~ 102 (273)
T 3bus_A 41 SVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR------D-V-RVTGISISRPQVNQANA 102 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS------C-C-EEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc------C-C-EEEEEeCCHHHHHHHHH
Confidence 44555555566666644 4555 4 5666777666655532 1 2 58889888776655543
No 189
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=27.07 E-value=2.8e+02 Score=23.35 Aligned_cols=56 Identities=16% Similarity=0.132 Sum_probs=33.7
Q ss_pred HHHHHh--cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 37 ANKSVE--FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 37 A~~A~~--~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
|..|++ -+++|+. +=+|+|+.=...++ |++. .| .+.+.++..|.+-..+++++|..
T Consensus 160 a~~al~~~~~~~g~~VlV~GaG~vG~~aiq-lak~--~G-a~~Vi~~~~~~~~~~~a~~lGa~ 218 (356)
T 1pl8_A 160 GIHACRRGGVTLGHKVLVCGAGPIGMVTLL-VAKA--MG-AAQVVVTDLSATRLSKAKEIGAD 218 (356)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSHHHHHHHH-HHHH--TT-CSEEEEEESCHHHHHHHHHTTCS
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHH--cC-CCEEEEECCCHHHHHHHHHhCCC
Confidence 444554 4678874 44576654444444 4432 12 22477777788777889999976
No 190
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=27.05 E-value=94 Score=23.01 Aligned_cols=55 Identities=7% Similarity=0.045 Sum_probs=39.0
Q ss_pred eEEEccccHHHHHHHHhcchhcCCCceeecc-eeEecCCCEEEeecCCCCCCCHHHHHHHHccccCeE
Q 036939 123 PVEVVPVCWKFTANRFPDLFKDCGCVAKLRT-CYEKHNGNCIIDLYFKKDIGDMEVASNRILRLIAGV 189 (215)
Q Consensus 123 PVEV~P~a~~~v~~~l~~l~~~~G~~~~lR~-p~vTDnGN~IlD~~f~~~i~dp~~l~~~L~~i~pGV 189 (215)
=+.+.|.....+.+.+.++ +.++. -.+|-+.|+++-+.+. |.+++++.+..+ ++|
T Consensus 70 ~v~~~~~~~~~~~~~l~~~-------p~V~~~~~~tG~~d~~~~v~~~----~~~~l~~~~~~l-~~v 125 (144)
T 2cfx_A 70 EATVKNADYERFKSYIQTL-------PNIEFCYRIAGAACYMLKINAE----SLEAVEDFINKT-SPY 125 (144)
T ss_dssp EEEEGGGCHHHHHHHHHTC-------TTEEEEEEEESSSSEEEEEEES----SHHHHHHHHHHH-TTT
T ss_pred EEEECcccHHHHHHHHhcC-------hhhheeeeeeCCCCEEEEEEEC----CHHHHHHHHHHh-cCc
Confidence 3456677788888888775 33443 3477777999999865 477777777777 763
No 191
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=26.77 E-value=50 Score=27.07 Aligned_cols=49 Identities=18% Similarity=0.192 Sum_probs=30.6
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCC-CCEEE-ecCc--HHHHHHHHHCCCCeeecC
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKL-KNIVG-IPTS--KTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l-~~i~~-V~tS--~~t~~~~~~~Gi~v~~l~ 101 (215)
+++-|+||+...+++++. ++.+ ..+.+ |++. ....+.|+++|||+..++
T Consensus 5 vl~Sg~gsnl~ali~~~~----~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~ 57 (212)
T 1jkx_A 5 VLISGNGSNLQAIIDACK----TNKIKGTVRAVFSNKADAFGLERARQAGIATHTLI 57 (212)
T ss_dssp EEESSCCHHHHHHHHHHH----TTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECC
T ss_pred EEEECCcHHHHHHHHHHH----cCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeC
Confidence 445688888777766654 3433 13444 4442 345678999999988543
No 192
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=26.69 E-value=62 Score=26.80 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHh----cC--cCCCEEEeCcChhHHHHHHHHHh
Q 036939 28 TQDELKKIAANKSVE----FV--KSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~----~V--~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
+.+++-+.+|+..++ .+ +..-+|||-+|||-..+-+.|.+
T Consensus 13 ~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~~ 58 (233)
T 3nwp_A 13 TPSALEQQLASKIASQLQEAVDARGKASLVVSGGSTPLKLFQLLSM 58 (233)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHh
Confidence 344554445444333 22 34458999999999999999874
No 193
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=26.55 E-value=2.3e+02 Score=23.60 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=32.2
Q ss_pred cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 43 FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 43 ~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
.+++|.. +=.|+|+.-...++.+.. .| ...+.++..|.+-..+++++|..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~---~G-~~~vi~~~~~~~k~~~a~~lGa~ 207 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVA---LG-AKSVTAIDISSEKLALAKSFGAM 207 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHH---TT-CSEEEEEESCHHHHHHHHHTTCS
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHH---cC-CcEEEEEechHHHHHHHHHcCCe
Confidence 4567764 445777666666655433 22 22466777788778899999976
No 194
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=26.47 E-value=83 Score=26.19 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHHHhcC------cCCCEEEeCcChhHHHHHHHHHhH
Q 036939 28 TQDELKKIAANKSVEFV------KSGMVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V------~~g~vIGLGsGSTv~~~i~~L~~~ 68 (215)
+.+++-+.+|+.-++.+ +..-+|||-+|||-..+-++|.++
T Consensus 15 ~~~~l~~~~A~~i~~~i~~~~~~~~~~~l~LsgGstP~~~y~~L~~~ 61 (248)
T 3oc6_A 15 DTAALVAAAGDRLVDAISSAIGERGQATIVLTGGGTGIGLLKRVRER 61 (248)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECCCccHHHHHHHHHhh
Confidence 44555555555555444 334589999999999999999863
No 195
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=26.24 E-value=33 Score=27.59 Aligned_cols=48 Identities=15% Similarity=0.128 Sum_probs=32.5
Q ss_pred eCcChhHHHHHHHHHhHHhcCCCCC--E-EEecC-cHHHHHHHHHCCCCeeecCCC
Q 036939 52 LGTDSTATHAVDKIGELLHQGKLKN--I-VGIPT-SKTTHDQAVSLGIPLSDLDSH 103 (215)
Q Consensus 52 LGsGSTv~~~i~~L~~~~~~~~l~~--i-~~V~t-S~~t~~~~~~~Gi~v~~l~~~ 103 (215)
+.||+|+..+++.|.++ |. +. + .+++- +....+.+++.|++++.+-..
T Consensus 127 itTG~Tl~~a~~~L~~~---Ga-~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~ 178 (211)
T 2aee_A 127 ISTGGSVLDAAAAASRE---GA-DVLGVVAIFTYELPKASQNFKEAGIKLITLSNY 178 (211)
T ss_dssp ESSCHHHHHHHHHHHHT---TC-EEEEEEEEEECCCHHHHHHHHHHTCCEEESCCH
T ss_pred ccchHHHHHHHHHHHHC---CC-cEEEEEEEEecccccHHHHHHhCCCCEEEEeeH
Confidence 78999999999998753 21 12 2 22332 456667777789998877554
No 196
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=25.86 E-value=52 Score=27.15 Aligned_cols=21 Identities=10% Similarity=0.082 Sum_probs=18.4
Q ss_pred CCEEEeCcChhHHHHHHHHHh
Q 036939 47 GMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.-+|||-+|||-..+-++|.+
T Consensus 34 ~~~l~LsgGstp~~~y~~L~~ 54 (226)
T 3lwd_A 34 RALLVVSGGSTPKPFFTSLAA 54 (226)
T ss_dssp CEEEEECCSSTTHHHHHHHHT
T ss_pred CEEEEEcCCCCHHHHHHHHHh
Confidence 358999999999999999874
No 197
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=25.84 E-value=3e+02 Score=23.14 Aligned_cols=64 Identities=13% Similarity=0.221 Sum_probs=38.7
Q ss_pred CCCEEEe--CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee-ecCC----------CCceeEEEec
Q 036939 46 SGMVVGL--GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS-DLDS----------HPVIDLAIDG 112 (215)
Q Consensus 46 ~g~vIGL--GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~-~l~~----------~~~iDl~iDG 112 (215)
+|..|-+ |+|..=..+++.+.. .| . .+.++..+.+-..+++++|...+ +..+ -..+|+.||-
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~---~G-a-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA---YG-L-RVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH---TT-C-EEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH---cC-C-EEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEEC
Confidence 7876655 566665555554432 23 3 47777777777888899987633 2221 1247777775
Q ss_pred CC
Q 036939 113 AD 114 (215)
Q Consensus 113 aD 114 (215)
+.
T Consensus 225 ~g 226 (346)
T 3fbg_A 225 FN 226 (346)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 198
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=25.50 E-value=84 Score=27.52 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHHhcCc--------CCCEEEeCcChhHHHHHHHHHh
Q 036939 27 LTQDELKKIAANKSVEFVK--------SGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 27 ~~~~~~K~~aA~~A~~~V~--------~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
.+.+++-+.+|+..++.|. +--+|||-+|||-..+-++|.+
T Consensus 33 ~d~~~ls~~aA~~i~~~I~~~~~~~~~~~~~l~LsgGsTP~~ly~~L~~ 81 (312)
T 3e15_A 33 KDLTDFNQKSAYYICHQIAEKQLSKEGGHVVIGLSGGKTPIDVYKNIAL 81 (312)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEECCSHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHhhhhhhhCCCEEEEEeCCCCHHHHHHHHHH
Confidence 3566666677766666553 3469999999999999999974
No 199
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=25.50 E-value=1.4e+02 Score=26.66 Aligned_cols=48 Identities=8% Similarity=-0.018 Sum_probs=40.1
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeee
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSD 99 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~ 99 (215)
+.+|=+|.|..-..+++.|.++ +. ++++|-.+.+....+++.|++++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~----g~-~vvvId~d~~~v~~~~~~g~~vi~ 52 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS----GV-KMVVLDHDPDHIETLRKFGMKVFY 52 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TC-CEEEEECCHHHHHHHHHTTCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHHC----CC-CEEEEECCHHHHHHHHhCCCeEEE
Confidence 4588899999999999988652 23 699999999999999999999773
No 200
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=25.08 E-value=1.8e+02 Score=23.55 Aligned_cols=34 Identities=12% Similarity=-0.054 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhcCcC--CCEEEeCcChhHHHHHH
Q 036939 29 QDELKKIAANKSVEFVKS--GMVVGLGTDSTATHAVD 63 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~V~~--g~vIGLGsGSTv~~~i~ 63 (215)
.+..|..+..-|-++.+- |-.|- .||.|..++-+
T Consensus 35 ~D~dK~~lv~~ak~~~~lL~Gf~L~-AT~gTa~~L~e 70 (178)
T 1vmd_A 35 HDRRKRDLLEWVSFNLGTLSKHELY-ATGTTGALLQE 70 (178)
T ss_dssp CGGGHHHHHHHHHHSHHHHTTSEEE-ECHHHHHHHHH
T ss_pred ehhhHHHHHHHHHHHHHHhcCCEEE-EchHHHHHHHH
Confidence 455677777777777665 76653 78888877655
No 201
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=24.99 E-value=3.6e+02 Score=23.77 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=30.2
Q ss_pred cCcCCCEEEe-CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 43 FVKSGMVVGL-GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 43 ~V~~g~vIGL-GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
-+++|..|-+ |.++.+-.++-.++.. .| . .+.++..|.+-..+++++|..
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~--~G-a-~vi~~~~~~~~~~~~~~lGa~ 275 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALA--GG-A-NPICVVSSPQKAEICRAMGAE 275 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHH--TT-C-EEEEEESSHHHHHHHHHHTCC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHH--cC-C-eEEEEECCHHHHHHHHhhCCc
Confidence 4688885554 5524444444444432 22 3 355666777777888999976
No 202
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=24.98 E-value=1.7e+02 Score=23.27 Aligned_cols=44 Identities=18% Similarity=0.164 Sum_probs=29.7
Q ss_pred EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHH-HCCCCee
Q 036939 51 GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAV-SLGIPLS 98 (215)
Q Consensus 51 GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~-~~Gi~v~ 98 (215)
-+|.|.--..+++.|.+. |. .+++++..+.+....++ ++|+...
T Consensus 5 iiG~G~mG~~~a~~l~~~---g~-~~v~~~~r~~~~~~~~~~~~g~~~~ 49 (263)
T 1yqg_A 5 FLGGGNMAAAVAGGLVKQ---GG-YRIYIANRGAEKRERLEKELGVETS 49 (263)
T ss_dssp EECCSHHHHHHHHHHHHH---CS-CEEEEECSSHHHHHHHHHHTCCEEE
T ss_pred EECchHHHHHHHHHHHHC---CC-CeEEEECCCHHHHHHHHHhcCCEEe
Confidence 378898888888888652 31 26888887776665554 4587643
No 203
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=24.61 E-value=1.6e+02 Score=25.41 Aligned_cols=62 Identities=19% Similarity=0.265 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcCcCC-CEEEeCcChh---------------HHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 33 KKIAANKSVEFVKSG-MVVGLGTDST---------------ATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 33 K~~aA~~A~~~V~~g-~vIGLGsGST---------------v~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
...+.+.|.++++.| .+|=+|.-|| +..++++|.+.. .. .+-+=|+..++++.|.+.|..
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~---~v-piSIDT~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV---KL-PISIDTYKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS---CS-CEEEECSCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC---Cc-eEEEeCCCHHHHHHHHHcCCC
Confidence 355667788899998 5899997676 333334443321 34 488888999999999888988
Q ss_pred ee
Q 036939 97 LS 98 (215)
Q Consensus 97 v~ 98 (215)
++
T Consensus 138 iI 139 (297)
T 1tx2_A 138 II 139 (297)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 204
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=24.57 E-value=86 Score=26.02 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=28.8
Q ss_pred CcChhHHHHHHHHHhHHhcCCC-CCEEE-ecCc--HHHHHHHHHCCCCeeec
Q 036939 53 GTDSTATHAVDKIGELLHQGKL-KNIVG-IPTS--KTTHDQAVSLGIPLSDL 100 (215)
Q Consensus 53 GsGSTv~~~i~~L~~~~~~~~l-~~i~~-V~tS--~~t~~~~~~~Gi~v~~l 100 (215)
|+|+....++++|.+ +.+ .+|.+ |+.. ....+.|+++|||+..+
T Consensus 31 G~g~~~~~~l~~l~~----~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~ 78 (229)
T 3auf_A 31 GSGTNLQAILDGCRE----GRIPGRVAVVISDRADAYGLERARRAGVDALHM 78 (229)
T ss_dssp SCCHHHHHHHHHHHT----TSSSEEEEEEEESSTTCHHHHHHHHTTCEEEEC
T ss_pred CCcHHHHHHHHHHHh----CCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEE
Confidence 999998888888754 222 13444 4432 24457899999998743
No 205
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=24.42 E-value=3.1e+02 Score=23.01 Aligned_cols=72 Identities=21% Similarity=0.252 Sum_probs=41.0
Q ss_pred HHHHHH-h--cCcCCC-EEEeC-cChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCCC-------
Q 036939 36 AANKSV-E--FVKSGM-VVGLG-TDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDSH------- 103 (215)
Q Consensus 36 aA~~A~-~--~V~~g~-vIGLG-sGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~~------- 103 (215)
.|..|+ + -+++|. ++=+| +|..=..+++ ++.. .| . .+.++ .|.+-..+++++|...++ ...
T Consensus 137 ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q-~a~~--~G-a-~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~ 209 (343)
T 3gaz_A 137 TAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQ-IALA--RG-A-RVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAA 209 (343)
T ss_dssp HHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHH-HHHH--TT-C-EEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHH-HHHH--CC-C-EEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHH
Confidence 355555 3 457787 45556 4544444444 4332 23 3 46666 666667788888876543 211
Q ss_pred -----CceeEEEecCC
Q 036939 104 -----PVIDLAIDGAD 114 (215)
Q Consensus 104 -----~~iDl~iDGaD 114 (215)
..+|+.||-+.
T Consensus 210 ~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 210 EHTAGQGFDLVYDTLG 225 (343)
T ss_dssp HHHTTSCEEEEEESSC
T ss_pred HHhcCCCceEEEECCC
Confidence 25788888665
No 206
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=24.41 E-value=1.6e+02 Score=25.87 Aligned_cols=62 Identities=15% Similarity=0.054 Sum_probs=40.2
Q ss_pred HHHHHHHHhcCcCC-CEEEeCcChh--------------HHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 34 KIAANKSVEFVKSG-MVVGLGTDST--------------ATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 34 ~~aA~~A~~~V~~g-~vIGLGsGST--------------v~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
..+-+.|.+++++| .+|=+|.-|| +..++++|.+... .. -|-+=|...++++.|-+.|..++
T Consensus 65 ~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~--~v-pISIDT~~~~VaeaAl~aGa~iI 141 (318)
T 2vp8_A 65 AAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYP--DQ-LISVDTWRAQVAKAACAAGADLI 141 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHST--TC-EEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCC--CC-eEEEeCCCHHHHHHHHHhCCCEE
Confidence 44556788899999 5999998665 3333454443210 23 37778888889998888898877
No 207
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=24.36 E-value=1.2e+02 Score=26.34 Aligned_cols=49 Identities=27% Similarity=0.303 Sum_probs=35.2
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc-------------HHHHHHHHHCCCCeeecCC
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS-------------KTTHDQAVSLGIPLSDLDS 102 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS-------------~~t~~~~~~~Gi~v~~l~~ 102 (215)
++-+||+..+...+++|.+. + . ++.+|=|. ......|+++|||+...+.
T Consensus 6 Ivf~Gt~~fa~~~L~~L~~~---~-~-~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~ 67 (314)
T 1fmt_A 6 IIFAGTPDFAARHLDALLSS---G-H-NVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVS 67 (314)
T ss_dssp EEEEECSHHHHHHHHHHHHT---T-C-EEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSC
T ss_pred EEEEecCHHHHHHHHHHHHC---C-C-cEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCC
Confidence 78999999888888888652 2 2 45544333 2577889999999876544
No 208
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=24.22 E-value=74 Score=26.16 Aligned_cols=41 Identities=12% Similarity=0.079 Sum_probs=25.6
Q ss_pred EEeCcChhHHHHHHHHHhHHhcCCCC-CEEEecCcHHHHHHHHH
Q 036939 50 VGLGTDSTATHAVDKIGELLHQGKLK-NIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 50 IGLGsGSTv~~~i~~L~~~~~~~~l~-~i~~V~tS~~t~~~~~~ 92 (215)
||-|||..+..+++.+.++... .. .+++|=.|......+++
T Consensus 59 iG~GtG~~~~~~l~~l~~~~~~--~~v~~~~vD~S~~ml~~a~~ 100 (292)
T 2aot_A 59 IGGGAGEIDLQILSKVQAQYPG--VCINNEVVEPSAEQIAKYKE 100 (292)
T ss_dssp ETCTTSHHHHHHHHHHHHHSTT--CEEEEEEECSCHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHhhCCC--ceeeEEEEeCCHHHHHHHHH
Confidence 5666776666777777654221 11 12889899887766654
No 209
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=24.08 E-value=1.5e+02 Score=23.89 Aligned_cols=46 Identities=9% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCEEE-eCcChhHHHHHHHHHhHHhcCCCCC-EEEecCcHHHHHHH-HHCCCCe
Q 036939 47 GMVVG-LGTDSTATHAVDKIGELLHQGKLKN-IVGIPTSKTTHDQA-VSLGIPL 97 (215)
Q Consensus 47 g~vIG-LGsGSTv~~~i~~L~~~~~~~~l~~-i~~V~tS~~t~~~~-~~~Gi~v 97 (215)
+|.|| +|.|..-..+++.|.+. | . + +.++..+.+....+ +++|+..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~---g-~-~~v~~~~~~~~~~~~~~~~~g~~~ 58 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK---G-F-RIVQVYSRTEESARELAQKVEAEY 58 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH---T-C-CEEEEECSSHHHHHHHHHHTTCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC---C-C-eEEEEEeCCHHHHHHHHHHcCCce
Confidence 35444 79999998888888653 3 3 4 67777776666544 4457654
No 210
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=24.03 E-value=1.3e+02 Score=26.08 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=33.9
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecC-------------cHHHHHHHHHCCCCeeecCC
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPT-------------SKTTHDQAVSLGIPLSDLDS 102 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~t-------------S~~t~~~~~~~Gi~v~~l~~ 102 (215)
+|..||...+...+++|.+. + . ++..|=| ......+|+++|||+.....
T Consensus 5 ivf~Gtp~fa~~~L~~L~~~---~-~-~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~ 66 (314)
T 3tqq_A 5 IVFAGTPQFAVPTLRALIDS---S-H-RVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFS 66 (314)
T ss_dssp EEEEECSGGGHHHHHHHHHS---S-S-EEEEEECCCC----------CCHHHHHHHHTTCCEECCSC
T ss_pred EEEECCCHHHHHHHHHHHHC---C-C-eEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECccc
Confidence 78999999888888888642 2 2 4554433 12356889999999875433
No 211
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=23.98 E-value=77 Score=26.15 Aligned_cols=48 Identities=19% Similarity=0.091 Sum_probs=30.8
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCCC-CEEEecCc-H--HHHHHHHHCCCCeeec
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKLK-NIVGIPTS-K--TTHDQAVSLGIPLSDL 100 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l~-~i~~V~tS-~--~t~~~~~~~Gi~v~~l 100 (215)
++.-|+||....+++++. ++.+. +|.+|-|. . ...+.|+++|||+..+
T Consensus 13 vl~SG~gsnl~all~~~~----~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~ 64 (215)
T 3kcq_A 13 VLISGRGSNLEALAKAFS----TEESSVVISCVISNNAEARGLLIAQSYGIPTFVV 64 (215)
T ss_dssp EEESSCCHHHHHHHHHTC----CC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred EEEECCcHHHHHHHHHHH----cCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEe
Confidence 456799999887777663 34332 35554443 2 2446799999998854
No 212
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=23.67 E-value=1.2e+02 Score=26.03 Aligned_cols=49 Identities=18% Similarity=0.263 Sum_probs=33.6
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEe-cCcHH---------HHHHHHHCCCCeeecCC
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKLKNIVGI-PTSKT---------THDQAVSLGIPLSDLDS 102 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V-~tS~~---------t~~~~~~~Gi~v~~l~~ 102 (215)
++-+||+..+...+++|.+. + . ++.+| +...+ ...+|+++|||+...+.
T Consensus 3 ivf~gt~~fa~~~L~~L~~~---~-~-~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~ 61 (305)
T 2bln_A 3 TVVFAYHDMGCLGIEALLAA---G-Y-EISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN 61 (305)
T ss_dssp EEEEECHHHHHHHHHHHHHT---T-C-EEEEEECCCC------CCCCHHHHHHHHTCCEECCSC
T ss_pred EEEEEcCHHHHHHHHHHHHC---C-C-cEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCc
Confidence 67889998888888888653 2 2 45444 43222 67889999999886554
No 213
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=23.63 E-value=57 Score=30.44 Aligned_cols=40 Identities=18% Similarity=0.390 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhc----CcCC------CEEEeCcChhHHHHHHHHHhH
Q 036939 29 QDELKKIAANKSVEF----VKSG------MVVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~----V~~g------~vIGLGsGSTv~~~i~~L~~~ 68 (215)
.++.++++|+.|+++ +++| +++=+|-|+....+...|.+.
T Consensus 224 ~~~~~~~Ia~~~a~~i~~~~~~G~l~~~~~~lq~GiG~ip~aV~~~l~~~ 273 (506)
T 2nvv_A 224 LDPVTQAIGDNVAAFLVSEMKAGRIPKDFLPLQSGVGNVANAVLGALGDN 273 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEECSSHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHHhhhhcCcccCCCceEEeCCCHHHHHHHHHhhhc
Confidence 346688899999984 4566 999999999988888888764
No 214
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=23.53 E-value=1.2e+02 Score=25.39 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHh----cC-cCC-CEEEeCcChhHHHHHHHHHh
Q 036939 28 TQDELKKIAANKSVE----FV-KSG-MVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~----~V-~~g-~vIGLGsGSTv~~~i~~L~~ 67 (215)
+.+++-+.+|+..++ .+ +.| -+|||-+|||-..+-+.|.+
T Consensus 12 ~~~~l~~~~A~~i~~~i~~~i~~~~~~~l~LsgGstP~~ly~~L~~ 57 (266)
T 3eb9_A 12 TPQELSAAGCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLHD 57 (266)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHH
Confidence 445555555544442 33 334 48999999999999999984
No 215
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=23.48 E-value=1.6e+02 Score=25.47 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=34.2
Q ss_pred CEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc-------------HHHHHHHHHCCCCeeecC
Q 036939 48 MVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS-------------KTTHDQAVSLGIPLSDLD 101 (215)
Q Consensus 48 ~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS-------------~~t~~~~~~~Gi~v~~l~ 101 (215)
.+|.+||...+...+++|.+. + . ++..|=|. .....+|+++|||+....
T Consensus 9 rivf~Gt~~fa~~~L~~L~~~---~-~-~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~ 70 (318)
T 3q0i_A 9 RIVFAGTPDFAARHLAALLSS---E-H-EIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPE 70 (318)
T ss_dssp EEEEECCSHHHHHHHHHHHTS---S-S-EEEEEECCCC---------CCCHHHHHHHHTTCCEECCS
T ss_pred EEEEEecCHHHHHHHHHHHHC---C-C-cEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccC
Confidence 489999999888888888642 2 2 45544332 245688999999987543
No 216
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=23.30 E-value=1.8e+02 Score=24.94 Aligned_cols=72 Identities=18% Similarity=0.260 Sum_probs=41.4
Q ss_pred HHHHh--cCcCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCC------C-Cce
Q 036939 38 NKSVE--FVKSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDS------H-PVI 106 (215)
Q Consensus 38 ~~A~~--~V~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~------~-~~i 106 (215)
..|+. .+++|+. +=+|+|. +-.++=.|++. .| . .+.++..|.+-..+++++|.. +++..+ . ..+
T Consensus 184 ~~al~~~~~~~g~~VlV~GaG~-vG~~aiqlak~--~G-a-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 184 YSPLRHWQAGPGKKVGVVGIGG-LGHMGIKLAHA--MG-A-HVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp HHHHHHTTCCTTCEEEEECCSH-HHHHHHHHHHH--TT-C-EEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCE
T ss_pred HHHHHhcCCCCCCEEEEECCCH-HHHHHHHHHHH--CC-C-EEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCC
Confidence 44443 4677874 4457765 44444444432 22 3 366677677777788889976 333221 1 357
Q ss_pred eEEEecCC
Q 036939 107 DLAIDGAD 114 (215)
Q Consensus 107 Dl~iDGaD 114 (215)
|+.||-+-
T Consensus 259 Dvvid~~g 266 (369)
T 1uuf_A 259 DFILNTVA 266 (369)
T ss_dssp EEEEECCS
T ss_pred CEEEECCC
Confidence 88888654
No 217
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=23.03 E-value=32 Score=28.82 Aligned_cols=52 Identities=8% Similarity=0.062 Sum_probs=38.8
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHh-cCCCC-CEEEecCcHHHHHHHHHCCCCee
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLH-QGKLK-NIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~-~~~l~-~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
-+.|-.-|.+|+..|.+.+.+... ...+. ++++++-|..|++.|+++|++..
T Consensus 209 ~d~v~FtS~~~v~~~~~~~~~~~~~~~~l~~~~~i~aIG~~TA~al~~~G~~~~ 262 (286)
T 3d8t_A 209 VDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPF 262 (286)
T ss_dssp CSEEEESSHHHHHHHHHHCSCHHHHHHHHTTTSEEEEESHHHHHHHHHTTCCCS
T ss_pred CCEEEEECHHHHHHHHHHHHhccchhhHhhcCCEEEEECHHHHHHHHHcCCCce
Confidence 368999999999999987753100 00123 47789999999999999998744
No 218
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=22.97 E-value=3.3e+02 Score=22.70 Aligned_cols=40 Identities=30% Similarity=0.378 Sum_probs=24.6
Q ss_pred CCCEEEecCc---HHHHHHHHHCCCCeeecCCC----CceeEEEecC
Q 036939 74 LKNIVGIPTS---KTTHDQAVSLGIPLSDLDSH----PVIDLAIDGA 113 (215)
Q Consensus 74 l~~i~~V~tS---~~t~~~~~~~Gi~v~~l~~~----~~iDl~iDGa 113 (215)
++++.+|..- ...-.+|..+|||++.+-+. +.+|..|=|-
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn~dp~~Vdy~IP~N 203 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCNPDLADISIPAN 203 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSSSCCSSCSEECCCC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCCCCccceeEEeeCC
Confidence 4677777653 33448889999998866332 2445554443
No 219
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=22.70 E-value=1.5e+02 Score=23.93 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhcC------cCCC-E--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 30 DELKKIAANKSVEFV------KSGM-V--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 30 ~~~K~~aA~~A~~~V------~~g~-v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
.+..++.....++.+ ++++ + ||-|+|.....+++.. + . .++++-.|......+++
T Consensus 60 ~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------~-~-~v~gvD~s~~~~~~a~~ 123 (297)
T 2o57_A 60 REASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF------G-V-SIDCLNIAPVQNKRNEE 123 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH------C-C-EEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh------C-C-EEEEEeCCHHHHHHHHH
Confidence 333344444444433 5555 4 5667777776665543 1 2 58888888776655543
No 220
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=22.68 E-value=3.5e+02 Score=22.87 Aligned_cols=75 Identities=13% Similarity=0.229 Sum_probs=42.6
Q ss_pred HHHHHH-h--cCcCCC-EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCCC------
Q 036939 36 AANKSV-E--FVKSGM-VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSHP------ 104 (215)
Q Consensus 36 aA~~A~-~--~V~~g~-vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~~------ 104 (215)
.|..|+ + -+++|+ ++=+|+|+.=..+++ +++.. | .+.+.++..|.+-..+++++|.. +++..+.+
T Consensus 177 ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q-lak~~--G-a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~ 252 (371)
T 1f8f_A 177 TGAGACINALKVTPASSFVTWGAGAVGLSALL-AAKVC--G-ASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIK 252 (371)
T ss_dssp HHHHHHHTTTCCCTTCEEEEESCSHHHHHHHH-HHHHH--T-CSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHc--C-CCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHH
Confidence 344444 3 467776 444577654444444 43321 2 22366777788878888999976 34332211
Q ss_pred -----ceeEEEecCC
Q 036939 105 -----VIDLAIDGAD 114 (215)
Q Consensus 105 -----~iDl~iDGaD 114 (215)
.+|+.||-+.
T Consensus 253 ~~~~gg~D~vid~~g 267 (371)
T 1f8f_A 253 EITDGGVNFALESTG 267 (371)
T ss_dssp HHTTSCEEEEEECSC
T ss_pred HhcCCCCcEEEECCC
Confidence 3777777654
No 221
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=22.58 E-value=1.7e+02 Score=22.19 Aligned_cols=52 Identities=19% Similarity=0.290 Sum_probs=31.0
Q ss_pred HHHHhcCcCCC-EE--EeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHC-CCCee
Q 036939 38 NKSVEFVKSGM-VV--GLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSL-GIPLS 98 (215)
Q Consensus 38 ~~A~~~V~~g~-vI--GLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~-Gi~v~ 98 (215)
...++.++++. ++ |-|+|....++++ + + . .+++|=.|......+++. ++.+.
T Consensus 35 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~----~---~-~-~v~~vD~s~~~~~~a~~~~~~~~~ 90 (211)
T 3e23_A 35 TKFLGELPAGAKILELGCGAGYQAEAMLA----A---G-F-DVDATDGSPELAAEASRRLGRPVR 90 (211)
T ss_dssp HHHHTTSCTTCEEEESSCTTSHHHHHHHH----T---T-C-EEEEEESCHHHHHHHHHHHTSCCE
T ss_pred HHHHHhcCCCCcEEEECCCCCHHHHHHHH----c---C-C-eEEEECCCHHHHHHHHHhcCCceE
Confidence 33445566554 54 5555555544433 2 2 2 588898888888777665 66544
No 222
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=22.23 E-value=84 Score=23.75 Aligned_cols=45 Identities=18% Similarity=0.291 Sum_probs=28.1
Q ss_pred hcCcCCCE---EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHH
Q 036939 42 EFVKSGMV---VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVS 92 (215)
Q Consensus 42 ~~V~~g~v---IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~ 92 (215)
..+++|+. +|-|+|..+.++++.++. . - .+++|=.|......+++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~---~--~-~v~~vD~s~~~~~~a~~ 65 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGE---N--G-RVFGFDIQDKAIANTTK 65 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCT---T--C-EEEEECSCHHHHHHHHH
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCC---C--C-EEEEEECCHHHHHHHHH
Confidence 36677763 577777777666665421 1 1 58888888766655543
No 223
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=22.01 E-value=1.7e+02 Score=25.42 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=36.9
Q ss_pred CCC--EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCc-------------HHHHHHHHHCCCCeeecCCC
Q 036939 46 SGM--VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTS-------------KTTHDQAVSLGIPLSDLDSH 103 (215)
Q Consensus 46 ~g~--vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS-------------~~t~~~~~~~Gi~v~~l~~~ 103 (215)
++| +|..||...+...+++|.+. + . ++..|=|. .....+|+++|||+...+..
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~---~-~-~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~ 69 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED---G-Y-DVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRI 69 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT---T-C-EEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCT
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC---C-C-cEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccC
Confidence 455 89999999988888888652 2 2 45544331 24678899999998855443
No 224
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=21.94 E-value=3.5e+02 Score=22.59 Aligned_cols=67 Identities=22% Similarity=0.182 Sum_probs=39.9
Q ss_pred cCcCCC-EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC----------CceeEEE
Q 036939 43 FVKSGM-VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH----------PVIDLAI 110 (215)
Q Consensus 43 ~V~~g~-vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~----------~~iDl~i 110 (215)
.+++|+ ++=+|+|..=..+++.+.. .| . .+.++..|.+-..+++++|.. +++..+. ..+|+.|
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~---~G-a-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKA---MG-L-NVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHH---TT-C-EEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH---cC-C-EEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 467777 4556666644444444332 23 3 477777788777888999976 3333221 2477777
Q ss_pred ecCC
Q 036939 111 DGAD 114 (215)
Q Consensus 111 DGaD 114 (215)
|-+-
T Consensus 236 d~~g 239 (339)
T 1rjw_A 236 VTAV 239 (339)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 7654
No 225
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=21.86 E-value=71 Score=24.45 Aligned_cols=35 Identities=9% Similarity=-0.033 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCcCCC-EEEeCcChhHHHHHHHHHhH
Q 036939 33 KKIAANKSVEFVKSGM-VVGLGTDSTATHAVDKIGEL 68 (215)
Q Consensus 33 K~~aA~~A~~~V~~g~-vIGLGsGSTv~~~i~~L~~~ 68 (215)
++.+.+.+.++.++|+ ++-.|+|+ +..+.+.|.+.
T Consensus 125 ~~eai~~~~~~~~~gDvVLv~Gsg~-~~~~~~~l~~~ 160 (163)
T 3mvn_A 125 VDELVMRIVQQAKPNDHILIMSNGA-FGGIHQKLLTA 160 (163)
T ss_dssp HHHHHHHHHHHCCTTCEEEEECSSC-GGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEECCCC-HHHHHHHHHHH
Confidence 3445666777788886 56668888 44555555543
No 226
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=21.72 E-value=63 Score=26.71 Aligned_cols=47 Identities=19% Similarity=0.288 Sum_probs=30.7
Q ss_pred EEEe--CcChhHHHHHHHHHhHHhcCCC-CCEEEecCcHH--HHHHHHHCCCCeeec
Q 036939 49 VVGL--GTDSTATHAVDKIGELLHQGKL-KNIVGIPTSKT--THDQAVSLGIPLSDL 100 (215)
Q Consensus 49 vIGL--GsGSTv~~~i~~L~~~~~~~~l-~~i~~V~tS~~--t~~~~~~~Gi~v~~l 100 (215)
++-+ |+||+...+++++.+ .+ .+|.+|-|... ..+.|+++|||+...
T Consensus 15 i~vl~SG~gsnl~all~~~~~-----~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~ 66 (215)
T 3da8_A 15 LVVLASGTGSLLRSLLDAAVG-----DYPARVVAVGVDRECRAAEIAAEASVPVFTV 66 (215)
T ss_dssp EEEEESSCCHHHHHHHHHSST-----TCSEEEEEEEESSCCHHHHHHHHTTCCEEEC
T ss_pred EEEEEeCChHHHHHHHHHHhc-----cCCCeEEEEEeCCchHHHHHHHHcCCCEEEe
Confidence 4445 899998888877632 12 14555544433 457899999998765
No 227
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=21.67 E-value=28 Score=28.43 Aligned_cols=52 Identities=8% Similarity=0.062 Sum_probs=38.5
Q ss_pred CCEEEeCcChhHHHHHHHHHhHHh-cCCCC-CEEEecCcHHHHHHHHHCCCCee
Q 036939 47 GMVVGLGTDSTATHAVDKIGELLH-QGKLK-NIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 47 g~vIGLGsGSTv~~~i~~L~~~~~-~~~l~-~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
-+.|-.=|++++..|.+.+.+... ...++ ++++++-|..|++.++++|++..
T Consensus 184 ~d~v~ftS~~~v~~~~~~~~~~~~~~~~l~~~~~~~aIG~~Ta~~l~~~G~~~~ 237 (261)
T 1wcw_A 184 VDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPF 237 (261)
T ss_dssp CSEEEECSHHHHHHHHHHCSCHHHHHHHHHHTSEEEEESHHHHHHHHHTTCCCS
T ss_pred CCEEEEECHHHHHHHHHHHhhccchhHHhhcCCEEEEECHHHHHHHHHcCCCCc
Confidence 468999999999999987643100 00122 46789999999999999998744
No 228
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=21.59 E-value=2.8e+02 Score=23.61 Aligned_cols=65 Identities=17% Similarity=0.154 Sum_probs=36.4
Q ss_pred cCCCE-EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCC-----------CceeEEEe
Q 036939 45 KSGMV-VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSH-----------PVIDLAID 111 (215)
Q Consensus 45 ~~g~v-IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~-----------~~iDl~iD 111 (215)
++|.. +=.|.++.+-.++-.|++. .| . .+.++. |.+-..+++++|.. +++..+. ..+|++||
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~--~G-a-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d 237 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRL--SG-Y-IPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALD 237 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHH--TT-C-EEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHH--CC-C-EEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEE
Confidence 77774 4556644555555555542 23 3 355554 55566788999976 4433221 13677777
Q ss_pred cCC
Q 036939 112 GAD 114 (215)
Q Consensus 112 GaD 114 (215)
-.-
T Consensus 238 ~~g 240 (371)
T 3gqv_A 238 CIT 240 (371)
T ss_dssp SSC
T ss_pred CCC
Confidence 554
No 229
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=21.57 E-value=1.4e+02 Score=24.11 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=31.1
Q ss_pred EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC
Q 036939 50 VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP 96 (215)
Q Consensus 50 IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~ 96 (215)
.-+|.|..-..+++.|.+. | . +++++..+.+....+.+.|+.
T Consensus 4 ~iiG~G~~G~~~a~~l~~~---g-~-~V~~~~~~~~~~~~~~~~g~~ 45 (279)
T 2f1k_A 4 GVVGLGLIGASLAGDLRRR---G-H-YLIGVSRQQSTCEKAVERQLV 45 (279)
T ss_dssp EEECCSHHHHHHHHHHHHT---T-C-EEEEECSCHHHHHHHHHTTSC
T ss_pred EEEcCcHHHHHHHHHHHHC---C-C-EEEEEECCHHHHHHHHhCCCC
Confidence 3478999888888888642 3 3 588888888777777787764
No 230
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=21.48 E-value=1e+02 Score=28.57 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=22.6
Q ss_pred cCcCCCEEEeCcChhHHHHHHHHHh
Q 036939 43 FVKSGMVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 43 ~V~~g~vIGLGsGSTv~~~i~~L~~ 67 (215)
++++|.++=+|-|+.-..+...|.+
T Consensus 259 l~~dG~~lQ~GiG~ip~AV~~~L~~ 283 (514)
T 4eu9_A 259 LPPSLLPLQSGVGNVANAVLEGLKE 283 (514)
T ss_dssp SCTTCCCEECCCSHHHHHHHHHHHH
T ss_pred ccCCCceeccCCCchHHHHHHHHhh
Confidence 7899999999999998888888876
No 231
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=21.38 E-value=2.5e+02 Score=23.54 Aligned_cols=65 Identities=9% Similarity=0.106 Sum_probs=39.7
Q ss_pred cCC-CEEEe--CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCCCC------------ceeE
Q 036939 45 KSG-MVVGL--GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDSHP------------VIDL 108 (215)
Q Consensus 45 ~~g-~vIGL--GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~~~------------~iDl 108 (215)
++| .+|-+ |+|..=..+++.+..+ | . .+.++..|.+-..+++++|.. +++..+.+ .+|+
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~---G-a-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEE---G-F-RPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHH---T-C-EEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCE
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHC---C-C-EEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcE
Confidence 455 67666 7777666666555432 3 2 466776677777788888876 44433221 4777
Q ss_pred EEecCC
Q 036939 109 AIDGAD 114 (215)
Q Consensus 109 ~iDGaD 114 (215)
.||-+.
T Consensus 237 vid~~g 242 (349)
T 3pi7_A 237 FLDAVT 242 (349)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 777554
No 232
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=21.36 E-value=1.4e+02 Score=27.67 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=44.2
Q ss_pred cCcCCCEEE-eCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCeeecCC-CCceeEEEecC
Q 036939 43 FVKSGMVVG-LGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLSDLDS-HPVIDLAIDGA 113 (215)
Q Consensus 43 ~V~~g~vIG-LGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~~l~~-~~~iDl~iDGa 113 (215)
....|++|+ +|.|..=..+++.+... | . .+.++-.+......+++.|..+.++++ +...|+.|+-+
T Consensus 270 ~~l~GktV~IiG~G~IG~~~A~~lka~---G-a-~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 270 ALIGGKKVLICGYGDVGKGCAEAMKGQ---G-A-RVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT---T-C-EEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHC---C-C-EEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECC
Confidence 356777554 68898887777776532 3 3 577787777777788889987554432 23567777753
No 233
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=21.35 E-value=1.5e+02 Score=25.98 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCcCC-CEEEeCcChh-------------------HHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHC
Q 036939 34 KIAANKSVEFVKSG-MVVGLGTDST-------------------ATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSL 93 (215)
Q Consensus 34 ~~aA~~A~~~V~~g-~vIGLGsGST-------------------v~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~ 93 (215)
..+-+.|.+++++| .+|=+|.-|| +..+++.|.+. -.. .|-+=|...++++.|-+.
T Consensus 49 ~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~---~~v-pISIDT~~~~Va~aAl~a 124 (314)
T 3tr9_A 49 NSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR---FPQ-LISVDTSRPRVMREAVNT 124 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH---CCS-EEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh---CCC-eEEEeCCCHHHHHHHHHc
Confidence 44567788899999 4888887443 44555555442 123 366777788888888888
Q ss_pred CCCee
Q 036939 94 GIPLS 98 (215)
Q Consensus 94 Gi~v~ 98 (215)
|..++
T Consensus 125 Ga~iI 129 (314)
T 3tr9_A 125 GADMI 129 (314)
T ss_dssp TCCEE
T ss_pred CCCEE
Confidence 98877
No 234
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=21.01 E-value=81 Score=25.05 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=31.4
Q ss_pred EEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 49 VVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 49 vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
+.-+|+|..-..+++.|.+. | . +++++..+.+....+++.|+...
T Consensus 31 I~iiG~G~~G~~la~~l~~~---g-~-~V~~~~r~~~~~~~~~~~g~~~~ 75 (215)
T 2vns_A 31 VGILGSGDFARSLATRLVGS---G-F-KVVVGSRNPKRTARLFPSAAQVT 75 (215)
T ss_dssp EEEECCSHHHHHHHHHHHHT---T-C-CEEEEESSHHHHHHHSBTTSEEE
T ss_pred EEEEccCHHHHHHHHHHHHC---C-C-EEEEEeCCHHHHHHHHHcCCcee
Confidence 44579999998888888642 3 3 58888877776666655566543
No 235
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=21.01 E-value=1.3e+02 Score=24.60 Aligned_cols=44 Identities=25% Similarity=0.410 Sum_probs=31.9
Q ss_pred EEEeCc-ChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCe
Q 036939 49 VVGLGT-DSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPL 97 (215)
Q Consensus 49 vIGLGs-GSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v 97 (215)
+.-+|. |..-..+++.|.+ .| . +++++..+.+....+++.|+..
T Consensus 14 I~iIG~tG~mG~~la~~l~~---~g-~-~V~~~~r~~~~~~~~~~~g~~~ 58 (286)
T 3c24_A 14 VAILGAGGKMGARITRKIHD---SA-H-HLAAIEIAPEGRDRLQGMGIPL 58 (286)
T ss_dssp EEEETTTSHHHHHHHHHHHH---SS-S-EEEEECCSHHHHHHHHHTTCCC
T ss_pred EEEECCCCHHHHHHHHHHHh---CC-C-EEEEEECCHHHHHHHHhcCCCc
Confidence 344799 9999888888864 23 3 6888888877777777777543
No 236
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=20.77 E-value=2e+02 Score=23.54 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=38.9
Q ss_pred CcCCCEEE-eCc-ChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCC-eeecCC-------CCceeEEEecC
Q 036939 44 VKSGMVVG-LGT-DSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIP-LSDLDS-------HPVIDLAIDGA 113 (215)
Q Consensus 44 V~~g~vIG-LGs-GSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~-v~~l~~-------~~~iDl~iDGa 113 (215)
+++|..|- .|. |..=..+++.+.. .| . .+.++..|.+-...++++|.. +++..+ +..+|+.|| +
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~---~G-a-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~ 196 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARA---MG-L-RVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-V 196 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH---TT-C-EEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-C
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH---CC-C-EEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-C
Confidence 78887554 454 4444444444332 23 3 466666666666778889876 333322 135899999 7
Q ss_pred Cc
Q 036939 114 DE 115 (215)
Q Consensus 114 De 115 (215)
..
T Consensus 197 g~ 198 (302)
T 1iz0_A 197 RG 198 (302)
T ss_dssp SC
T ss_pred CH
Confidence 54
No 237
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=20.73 E-value=58 Score=30.32 Aligned_cols=39 Identities=26% Similarity=0.287 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhc----CcCC------CEEEeCcChhHHHHHHHHHh
Q 036939 29 QDELKKIAANKSVEF----VKSG------MVVGLGTDSTATHAVDKIGE 67 (215)
Q Consensus 29 ~~~~K~~aA~~A~~~----V~~g------~vIGLGsGSTv~~~i~~L~~ 67 (215)
.++.++++|+.|+++ +++| +++=+|-|+.-..+...|.+
T Consensus 229 ~~~~~~~Ia~~~a~~i~~~~~~G~l~~~~~~lqlGiG~ip~aV~~~l~~ 277 (497)
T 2g39_A 229 PDGETQAIANHLIDFFKREVDAGRMSNSLGPLQAGIGSIANAVMCGLIE 277 (497)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSCTTCSCEEECSSHHHHHHHHGGGS
T ss_pred CChHHHHHHHHHHHHHHhhhhcCCcccCCceEEeeEcHHHHHHHHHhhh
Confidence 346688899999884 5677 99999999888888877754
No 238
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=20.72 E-value=3.9e+02 Score=22.66 Aligned_cols=74 Identities=19% Similarity=0.203 Sum_probs=41.5
Q ss_pred HHHHHHh---c----CcCCCEE-EeC-cChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCe-eecCC---
Q 036939 36 AANKSVE---F----VKSGMVV-GLG-TDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPL-SDLDS--- 102 (215)
Q Consensus 36 aA~~A~~---~----V~~g~vI-GLG-sGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v-~~l~~--- 102 (215)
.|..|+. . +++|..| =.| +|..=..+++.+.. .| . .+.++. |.+-..+++++|... ++..+
T Consensus 166 tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~---~G-a-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~ 239 (375)
T 2vn8_A 166 TAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKA---WD-A-HVTAVC-SQDASELVRKLGADDVIDYKSGSV 239 (375)
T ss_dssp HHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHH---TT-C-EEEEEE-CGGGHHHHHHTTCSEEEETTSSCH
T ss_pred HHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHh---CC-C-EEEEEe-ChHHHHHHHHcCCCEEEECCchHH
Confidence 4556663 3 7788754 456 45554444444332 23 3 355555 445566788999763 33322
Q ss_pred ------CCceeEEEecCCc
Q 036939 103 ------HPVIDLAIDGADE 115 (215)
Q Consensus 103 ------~~~iDl~iDGaDe 115 (215)
...+|+.||-+-.
T Consensus 240 ~~~~~~~~g~D~vid~~g~ 258 (375)
T 2vn8_A 240 EEQLKSLKPFDFILDNVGG 258 (375)
T ss_dssp HHHHHTSCCBSEEEESSCT
T ss_pred HHHHhhcCCCCEEEECCCC
Confidence 1258999996643
No 239
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=20.65 E-value=2.5e+02 Score=23.00 Aligned_cols=58 Identities=26% Similarity=0.493 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHhcC--cCCC-E--EEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHC
Q 036939 28 TQDELKKIAANKSVEFV--KSGM-V--VGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSL 93 (215)
Q Consensus 28 ~~~~~K~~aA~~A~~~V--~~g~-v--IGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~ 93 (215)
+.++..+......++.+ ++|+ + ||-|+|..+.++++.. + . .+++|-.|......+++.
T Consensus 70 ~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~------~-~-~v~gvD~s~~~~~~a~~~ 132 (318)
T 2fk8_A 70 TLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF------D-V-NVIGLTLSKNQHARCEQV 132 (318)
T ss_dssp CHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH------C-C-EEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC------C-C-EEEEEECCHHHHHHHHHH
Confidence 34455555555566643 5665 4 5666776666655543 2 2 588999988877666543
No 240
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=20.60 E-value=3.6e+02 Score=22.27 Aligned_cols=65 Identities=12% Similarity=0.004 Sum_probs=38.3
Q ss_pred EEEeCcChhH---HHHHHHHHhHHhcCCCCCEEEecC-----cHHH---HHHHHHCCCCeeecCCC--------CceeEE
Q 036939 49 VVGLGTDSTA---THAVDKIGELLHQGKLKNIVGIPT-----SKTT---HDQAVSLGIPLSDLDSH--------PVIDLA 109 (215)
Q Consensus 49 vIGLGsGSTv---~~~i~~L~~~~~~~~l~~i~~V~t-----S~~t---~~~~~~~Gi~v~~l~~~--------~~iDl~ 109 (215)
+|=.|.|-+= ..+++.|.++ +. +++++-. +... ...+++.|+++....+. ...|+.
T Consensus 62 ~VlcG~GNNGGDGlv~AR~L~~~----G~-~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~dli 136 (246)
T 1jzt_A 62 FVIAGPGNNGGDGLVCARHLKLF----GY-NPVVFYPKRSERTEFYKQLVHQLNFFKVPVLSQDEGNWLEYLKPEKTLCI 136 (246)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHT----TC-CEEEECCCCCTTCHHHHHHHHHHHHTTCCEECSSTTCGGGGGSTTTEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHC----CC-eEEEEEcCCCCCCHHHHHHHHHHHHcCCcEEeccchhhhhhcccCCCcEE
Confidence 5777887764 5666777643 23 4666522 2222 24566778887642211 246999
Q ss_pred EecCCcccC
Q 036939 110 IDGADEVDP 118 (215)
Q Consensus 110 iDGaDeVd~ 118 (215)
||+-=++.-
T Consensus 137 IDaLfG~Gl 145 (246)
T 1jzt_A 137 VDAIFGFSF 145 (246)
T ss_dssp EEESCCTTC
T ss_pred EEecccCCC
Confidence 998766653
No 241
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=20.54 E-value=3.7e+02 Score=22.28 Aligned_cols=76 Identities=22% Similarity=0.304 Sum_probs=43.5
Q ss_pred HHHHHHH-h--cCcCCCEEEe-CcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHH-HHCCCCe-eecCCC-----
Q 036939 35 IAANKSV-E--FVKSGMVVGL-GTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQA-VSLGIPL-SDLDSH----- 103 (215)
Q Consensus 35 ~aA~~A~-~--~V~~g~vIGL-GsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~-~~~Gi~v-~~l~~~----- 103 (215)
..|..|+ + .+++|+.|-+ |+++.+-.++-.++.. .| . .+.++..|.+-...+ +++|... ++..+.
T Consensus 135 ~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~--~G-a-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 135 MTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARL--KG-C-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAG 210 (336)
T ss_dssp HHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHH--TT-C-EEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH--CC-C-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHH
Confidence 4566666 3 5788886554 6534444444444332 23 2 466666677666667 8888763 333221
Q ss_pred ------CceeEEEecCC
Q 036939 104 ------PVIDLAIDGAD 114 (215)
Q Consensus 104 ------~~iDl~iDGaD 114 (215)
..+|+.||-+.
T Consensus 211 ~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 211 LKRECPKGIDVFFDNVG 227 (336)
T ss_dssp HHHHCTTCEEEEEESSC
T ss_pred HHHhcCCCceEEEECCC
Confidence 14788888664
No 242
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=20.42 E-value=2.8e+02 Score=20.85 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=13.6
Q ss_pred CEEEecCcHHHHHHHHHCCCCee
Q 036939 76 NIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 76 ~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
+.++++|+ -|+..+++.||++.
T Consensus 50 Gf~i~AT~-GTa~~L~~~Gi~v~ 71 (143)
T 2yvq_A 50 GFKLFATE-ATSDWLNANNVPAT 71 (143)
T ss_dssp TCEEEEEH-HHHHHHHHTTCCCE
T ss_pred CCEEEECc-hHHHHHHHcCCeEE
Confidence 45566665 55666666776654
No 243
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.13 E-value=2.1e+02 Score=19.88 Aligned_cols=46 Identities=9% Similarity=0.157 Sum_probs=31.7
Q ss_pred CEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHHHHHHHHCCCCee
Q 036939 48 MVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTTHDQAVSLGIPLS 98 (215)
Q Consensus 48 ~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t~~~~~~~Gi~v~ 98 (215)
.++=+|.|..-..+++.|.+. | . +++++..+.+....+++.|...+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~---g-~-~v~~~d~~~~~~~~~~~~~~~~~ 53 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM---G-H-EVLAVDINEEKVNAYASYATHAV 53 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT---T-C-CCEEEESCHHHHHTTTTTCSEEE
T ss_pred cEEEECCCHHHHHHHHHHHHC---C-C-EEEEEeCCHHHHHHHHHhCCEEE
Confidence 477788899999999988652 3 3 58888777666555555565433
No 244
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=20.02 E-value=82 Score=27.80 Aligned_cols=36 Identities=31% Similarity=0.377 Sum_probs=24.9
Q ss_pred cCCCEEEeCcChhHHHHHHHHHhHHhcCCCCCEEEecCcHHH
Q 036939 45 KSGMVVGLGTDSTATHAVDKIGELLHQGKLKNIVGIPTSKTT 86 (215)
Q Consensus 45 ~~g~vIGLGsGSTv~~~i~~L~~~~~~~~l~~i~~V~tS~~t 86 (215)
+...+||+|+||+.- .++.++.+ . .+ .+.+|||.. |
T Consensus 88 ~~D~IIavGGGs~iD-~aK~iA~~--~-~~-P~i~IPTTa-t 123 (364)
T 3iv7_A 88 EIDLLVCVGGGSTIG-LAKAIAMT--T-AL-PIVAIPTTY-A 123 (364)
T ss_dssp TCCEEEEEESHHHHH-HHHHHHHH--H-CC-CEEEEECSS-S
T ss_pred CCCEEEEeCCcHHHH-HHHHHHhc--c-CC-CEEEEcCCc-c
Confidence 345799999999864 34555542 2 25 588999987 6
Done!