BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036943
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A
PE=1 SV=1
Length = 179
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%)
Query: 2 SSRDRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDDL 61
S RDRDPL++GRVVGDVLD F R+ +++TY +K V+NG ELKPS V +QPRVE+GG+D+
Sbjct: 4 SGRDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDM 63
Query: 62 RTFYTLVMVDPDAPSP 77
RTFYTLVMVDPDAPSP
Sbjct: 64 RTFYTLVMVDPDAPSP 79
>sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2
Length = 175
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 63/77 (81%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDD 60
MS RDPLI+ RVVGDVLD F R+I +++TY ++V NG +L+PS+V N+PRVEIGG+D
Sbjct: 1 MSINIRDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGED 60
Query: 61 LRTFYTLVMVDPDAPSP 77
LR FYTLVMVDPD PSP
Sbjct: 61 LRNFYTLVMVDPDVPSP 77
>sp|Q9S7R5|TSF_ARATH Protein TWIN SISTER of FT OS=Arabidopsis thaliana GN=TSF PE=2
SV=1
Length = 175
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 63/77 (81%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDD 60
MS RDPL++G VVGDVLD FTR + +++TY +++V NG +L+PS+VLN+P VEIGGDD
Sbjct: 1 MSLSRRDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDD 60
Query: 61 LRTFYTLVMVDPDAPSP 77
R FYTLVMVDPD PSP
Sbjct: 61 FRNFYTLVMVDPDVPSP 77
>sp|Q8VWH2|HD3B_ORYSJ Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B
PE=2 SV=1
Length = 178
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 2 SSRDRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDDL 61
S RD DPL++GR+VGDVLD F R + ++Y + V+NG ELKPS V QPRV +GG+D+
Sbjct: 4 SGRD-DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDM 62
Query: 62 RTFYTLVMVDPDAPSP 77
RTFYTLVMVDPDAPSP
Sbjct: 63 RTFYTLVMVDPDAPSP 78
>sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT
PE=3 SV=1
Length = 177
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
Query: 3 SRDRDPLILGRVVGDVLDNFTRTIPMRITY-LNKDVNNGRELKPSEVLNQPRVEIGGDDL 61
SR+ +PLI+GRV+GDVL+ F ++ MR+T+ N V+NG EL PS +L++PRVEIGG DL
Sbjct: 2 SREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDL 61
Query: 62 RTFYTLVMVDPDAPSP 77
R+F+TL+M+DPDAPSP
Sbjct: 62 RSFFTLIMMDPDAPSP 77
>sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1
SV=1
Length = 177
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDD 60
M +R +PLI+GRVVGDVLD FT T M ++Y K V+NG EL PS V ++PRVEI G D
Sbjct: 4 MGTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGD 63
Query: 61 LRTFYTLVMVDPDAPSP 77
LR+F+TLVM+DPD P P
Sbjct: 64 LRSFFTLVMIDPDVPGP 80
>sp|Q9XH42|CET4_TOBAC CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1
Length = 175
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITY-LNKDVNNGRELKPSEVLNQPRVEIGGD 59
M S+ DPL++GRV+G+V+D FT ++ M +TY +K V NG EL PS V ++PRVE+ G
Sbjct: 1 MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60
Query: 60 DLRTFYTLVMVDPDAPSP 77
DLR+F+TL+M+DPD P P
Sbjct: 61 DLRSFFTLIMIDPDVPGP 78
>sp|Q9XH43|CET2_TOBAC CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1
Length = 175
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITY-LNKDVNNGRELKPSEVLNQPRVEIGGD 59
M S+ DPL++GRV+G+V+D FT ++ M +TY +K V NG EL PS V ++PRVE+ G
Sbjct: 1 MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60
Query: 60 DLRTFYTLVMVDPDAPSP 77
DLR+F+T++M+DPD P P
Sbjct: 61 DLRSFFTMIMIDPDVPGP 78
>sp|O82088|SELFP_SOLLC Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1
Length = 175
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITYLN-KDVNNGRELKPSEVLNQPRVEIGGD 59
M+S+ +PL++GRV+G+V+D F ++ M + Y N K V NG E PS V ++PRVE+ G
Sbjct: 1 MASKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGG 60
Query: 60 DLRTFYTLVMVDPDAPSP 77
DLR+F+TL+M+DPD P P
Sbjct: 61 DLRSFFTLIMIDPDVPGP 78
>sp|Q41261|CEN_ANTMA Protein CENTRORADIALIS OS=Antirrhinum majus GN=CEN PE=1 SV=1
Length = 181
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 7 DPLILGRVVGDVLDNFTRTIPMRITYLN----KDVNNGRELKPSEVLNQPRVEIGGDDLR 62
DPL++GRV+GDV+D+FT T+ M + Y + K V NG EL PS V + PRVE+ G D+R
Sbjct: 8 DPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMR 67
Query: 63 TFYTLVMVDPDAPSP 77
+F+TL+M DPD P P
Sbjct: 68 SFFTLIMTDPDVPGP 82
>sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2
SV=1
Length = 175
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITY-LNKDVNNGRELKPSEVLNQPRVEIGGD 59
M+ DPL++GRV+GDV+DN + + M +TY +K V NG EL PS V +P+VE+ G
Sbjct: 1 MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGG 60
Query: 60 DLRTFYTLVMVDPDAPSP 77
D+R+F+TLVM DPD P P
Sbjct: 61 DMRSFFTLVMTDPDVPGP 78
>sp|Q9XH44|CET1_TOBAC CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1
Length = 174
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 1 MSSRDRDPLILGRVVGDVLDNFTRTIPMRITY-LNKDVNNGRELKPSEVLNQPRVEIGGD 59
M+SR +PL++ RV+G+V+D+F ++ + + Y +K V NG EL P+ + +PRVEIGG+
Sbjct: 1 MASRVVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGE 60
Query: 60 DLRTFYTLVMVDPDAPSP 77
D+R+ YTL+M DPD P P
Sbjct: 61 DMRSAYTLIMTDPDVPGP 78
>sp|Q9XFK7|MFT_ARATH Protein MOTHER of FT and TF 1 OS=Arabidopsis thaliana GN=MFT PE=1
SV=1
Length = 173
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 7 DPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDDLRTFYT 66
DPL++GRV+GDVLD F T M + + K + NG E+KPS +N P+V I G YT
Sbjct: 6 DPLVVGRVIGDVLDMFIPTANMSVYFGPKHITNGCEIKPSTAVNPPKVNISGHS-DELYT 64
Query: 67 LVMVDPDAPSP 77
LVM DPDAPSP
Sbjct: 65 LVMTDPDAPSP 75
>sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2
Length = 197
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 28 MRITYLNKDVNNGRELKPSEVLNQPRVEIGGDDLRTFYTLVMVDPDAPS 76
+ ++Y N VN G EL P++V NQP + YTLVM DPDAPS
Sbjct: 55 VNVSYNNLTVNLGNELTPTQVKNQPTKVSWDAEPGALYTLVMTDPDAPS 103
>sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1
Length = 152
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 28 MRITYLNKDVNNGRELKPSEVLNQPRVEIGGDDLRTFYTLVMVDPDAPS 76
+ ++Y N VN G EL P++V NQP + YTLVM DPDAPS
Sbjct: 10 VNVSYNNLTVNLGNELTPTQVKNQPTKVSWDAEPGALYTLVMTDPDAPS 58
>sp|P54185|OBA5_DROME Putative odorant-binding protein A5 OS=Drosophila melanogaster
GN=a5 PE=2 SV=2
Length = 210
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 13 RVVGDVLDNFTRTIPMRITYLNK-DVNNGRELKPSEVLNQPRVEIGGDDLRTFYTLVMVD 71
V+ ++LD R + +RI Y N D+ G+ P+E+ QPR++ D +FYT++M+
Sbjct: 34 EVIPEILDEPPREL-LRIKYDNTIDIEEGKTYTPTELKFQPRLDWNADP-ESFYTVLMIC 91
Query: 72 PDAPS 76
PDAP+
Sbjct: 92 PDAPN 96
>sp|Q5R4R0|PEBP1_PONAB Phosphatidylethanolamine-binding protein 1 OS=Pongo abelii
GN=PEBP1 PE=2 SV=3
Length = 187
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 27 PMRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
P+ +TY V+ G+ L P++V N+P + G D YTLV+ DPDAPS
Sbjct: 24 PLHVTYAGAAVDELGKVLTPTQVKNRPTSISWEGLDSGKLYTLVLTDPDAPS 75
>sp|P30086|PEBP1_HUMAN Phosphatidylethanolamine-binding protein 1 OS=Homo sapiens
GN=PEBP1 PE=1 SV=3
Length = 187
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 27 PMRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
P+ +TY V+ G+ L P++V N+P + G D YTLV+ DPDAPS
Sbjct: 24 PLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPS 75
>sp|P54188|D3_ONCVO Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1
Length = 134
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 37 VNNGRELKPSEVLNQPRVEIGGDDLRTFYTLVMVDPDAPS 76
VN G EL P++V NQP + YTLVM DPDAPS
Sbjct: 1 VNLGNELTPTQVKNQPTKVSWDAEPGALYTLVMTDPDAPS 40
>sp|P48737|PEBP1_MACFA Phosphatidylethanolamine-binding protein 1 OS=Macaca fascicularis
GN=PEBP1 PE=2 SV=2
Length = 187
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 27 PMRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
P+ +TY ++ G+ L P++V N+P + G D YTLV+ DPDAPS
Sbjct: 24 PLHVTYAGAALDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPS 75
>sp|P13696|PEBP1_BOVIN Phosphatidylethanolamine-binding protein 1 OS=Bos taurus GN=PEBP1
PE=1 SV=2
Length = 187
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 27 PMRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
P+++ Y +V+ G+ L P++V N+P + G D YTLV+ DPDAPS
Sbjct: 24 PLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPS 75
>sp|Q8VIN1|PEBP2_MOUSE Phosphatidylethanolamine-binding protein 2 OS=Mus musculus
GN=Pbp2 PE=1 SV=1
Length = 187
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 28 MRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
+R+TY +V G+ L P++V ++P + G D YTL++ DPDAPS
Sbjct: 25 LRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPS 75
>sp|P70296|PEBP1_MOUSE Phosphatidylethanolamine-binding protein 1 OS=Mus musculus
GN=Pebp1 PE=1 SV=3
Length = 187
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 28 MRITYLNKDVNN-GRELKPSEVLNQPR-VEIGGDDLRTFYTLVMVDPDAPS 76
+R+ Y V+ G+ L P++V+N+P + G D YTLV+ DPDAPS
Sbjct: 25 LRVDYAGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPS 75
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen OS=Toxocara canis GN=TES-26 PE=2 SV=1
Length = 262
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 34 NKDVNNGRELKPSEVLNQPRV--EIGGDDLRTFYTLVMVDPDAPS 76
N VN G L ++V NQP V E +D YTL+MVDPD PS
Sbjct: 123 NVQVNCGNTLTTAQVANQPTVTWEAQPNDR---YTLIMVDPDFPS 164
>sp|P31044|PEBP1_RAT Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus
GN=Pebp1 PE=1 SV=3
Length = 187
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 28 MRITYLNKDVNN-GRELKPSEVLNQPR-VEIGGDDLRTFYTLVMVDPDAPS 76
+R+ Y V+ G+ L P++V+N+P + G D YTLV+ DPDAPS
Sbjct: 25 LRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPS 75
>sp|Q3YIX4|PEBP1_CANFA Phosphatidylethanolamine-binding protein 1 OS=Canis familiaris
GN=PEBP1 PE=1 SV=1
Length = 187
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 28 MRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
+ + Y +V+ G+ L P++V N+P + G D YTLV+ DPDAPS
Sbjct: 25 LHVKYTGTEVDELGKVLTPTQVKNRPTSIAWDGLDPGKLYTLVLTDPDAPS 75
>sp|Q8MK67|PEBP1_RABIT Phosphatidylethanolamine-binding protein 1 OS=Oryctolagus
cuniculus GN=PEBP1 PE=2 SV=1
Length = 187
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 27 PMRITYLNKDVNN-GRELKPSEVLNQP-RVEIGGDDLRTFYTLVMVDPDAPS 76
P+++TY ++ G+ L P++V N+P + G D YTLV+ DPDAPS
Sbjct: 24 PLQVTYSGVALDELGQVLTPTQVKNRPTSIVWDGLDPDKLYTLVLTDPDAPS 75
>sp|Q5UR88|PEBPH_MIMIV Phosphatidylethanolamine-binding protein homolog R644
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R644 PE=1
SV=1
Length = 143
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 35 KDVNNGREL--KPSEVLNQPRVEIGGDDLRTFYTLVMVDPDAPS 76
++++NG+++ + S+ + +P +IG ++ +YT+ MVDPDAPS
Sbjct: 12 QNIDNGQKIIFEKSQDVPKPIFDIGDNE---YYTIAMVDPDAPS 52
>sp|O16264|PEBPH_CAEEL Phosphatidylethanolamine-binding protein homolog F40A3.3
OS=Caenorhabditis elegans GN=F40A3.3 PE=3 SV=1
Length = 221
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 36 DVNNGRELKPSEVLNQPRVEIGGDDLRTFYTLVMVDPDAPS 76
+ N G L P++V + P V+ + YTL+ DPDAPS
Sbjct: 70 EANLGNVLTPTQVKDTPEVKWDAEP-GALYTLIKTDPDAPS 109
>sp|Q9DUD8|L_SENDA RNA-directed RNA polymerase L OS=Sendai virus (strain Hamamatsu) GN=L
PE=3 SV=1
Length = 2228
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 4 RDRDPLILGRVVGDVLDNFTRTIPMRITYLNK-----DVNNGRELK--PSEV 48
+D+D L LG G +L + T+ I Y N DVN REL P+EV
Sbjct: 1796 KDKDRLFLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEV 1847
>sp|O55528|L_SENDO RNA-directed RNA polymerase L OS=Sendai virus (strain Ohita) GN=L
PE=3 SV=1
Length = 2228
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 4 RDRDPLILGRVVGDVLDNFTRTIPMRITYLNK-----DVNNGRELK--PSEV 48
+D+D L LG G +L + T+ I Y N DVN REL P+EV
Sbjct: 1796 KDKDRLFLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEV 1847
>sp|Q754H0|EXO70_ASHGO Exocyst complex protein EXO70 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EXO70 PE=3
SV=1
Length = 614
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 5 DRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNN 39
DR P + ++V +L N+T+ + I + D+NN
Sbjct: 261 DRRPAVFCKIVAPILHNYTKILRYNIDLVKDDINN 295
>sp|Q96S96|PEBP4_HUMAN Phosphatidylethanolamine-binding protein 4 OS=Homo sapiens GN=PEBP4
PE=1 SV=3
Length = 227
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 36 DVNNGRELKPSEVLNQPRVEIGGDDLRTFYTLVMVDPDAPS 76
D NN R+ S + +P V+ G Y LVMVDPDAPS
Sbjct: 63 DCNNYRQKITSWM--EPIVKFPGAVDGATYILVMVDPDAPS 101
>sp|P06447|L_SENDZ RNA-directed RNA polymerase L OS=Sendai virus (strain Z) GN=L PE=1
SV=1
Length = 2228
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 4 RDRDPLILGRVVGDVLDNFTRTIPMRITYLNK-----DVNNGRELK--PSEV 48
+D+D L LG G +L + T+ I Y N DVN REL P+EV
Sbjct: 1796 KDKDRLYLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEV 1847
>sp|Q06996|L_SENDF RNA-directed RNA polymerase L OS=Sendai virus (strain Fushimi) GN=L
PE=3 SV=1
Length = 2228
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 4 RDRDPLILGRVVGDVLDNFTRTIPMRITYLNK-----DVNNGRELK--PSEV 48
+D+D L LG G +L + T+ I Y N DVN REL P+EV
Sbjct: 1796 KDKDRLYLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEV 1847
>sp|P06829|L_SENDE RNA-directed RNA polymerase L OS=Sendai virus (strain Enders) GN=L
PE=3 SV=2
Length = 2228
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 4 RDRDPLILGRVVGDVLDNFTRTIPMRITYLNK-----DVNNGRELK--PSEV 48
+D+D L LG G +L + T+ I Y N DVN REL P+EV
Sbjct: 1796 KDKDRLYLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEV 1847
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.141 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,859,289
Number of Sequences: 539616
Number of extensions: 1133876
Number of successful extensions: 2290
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2263
Number of HSP's gapped (non-prelim): 38
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)