BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036949
(81 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388514231|gb|AFK45177.1| unknown [Lotus japonicus]
Length = 197
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/81 (85%), Positives = 73/81 (90%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK MFQLL+SAYSTIS D ALFLGMNEDDA YVQQQGWT+D ASRMLTVKKQP+VT
Sbjct: 117 LYTKEMFQLLLSAYSTISIADAALFLGMNEDDATSYVQQQGWTVDSASRMLTVKKQPVVT 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 177 EQKLDPSKLQRLTEYVFHLEH 197
>gi|351726828|ref|NP_001235860.1| uncharacterized protein LOC100500543 [Glycine max]
gi|255630595|gb|ACU15657.1| unknown [Glycine max]
Length = 197
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 74/81 (91%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK MFQLL+SAYSTIS +DTALFLGMNEDDA Y+ QQGWT+DPASRML VKKQP+VT
Sbjct: 117 LYTKEMFQLLLSAYSTISIKDTALFLGMNEDDATNYLLQQGWTVDPASRMLIVKKQPVVT 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 177 EQKLDPSKLQRLTEYVFHLEH 197
>gi|255627935|gb|ACU14312.1| unknown [Glycine max]
Length = 197
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 74/81 (91%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK MFQLL+SAYSTIS +DTALFLGMNEDDA YV QQGWT+DPAS+ML VKKQP+VT
Sbjct: 117 LYTKEMFQLLLSAYSTISIKDTALFLGMNEDDATNYVLQQGWTVDPASQMLIVKKQPVVT 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 177 EQKLDPSKLQRLTEYVFHLEH 197
>gi|363808024|ref|NP_001242464.1| uncharacterized protein LOC100801424 [Glycine max]
gi|255635465|gb|ACU18085.1| unknown [Glycine max]
Length = 155
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 74/81 (91%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK MFQLL+SAYSTIS +DTALFLGMNEDDA YV QQGWT+DPAS+ML VKKQP+VT
Sbjct: 75 LYTKEMFQLLLSAYSTISIKDTALFLGMNEDDATNYVLQQGWTVDPASQMLIVKKQPVVT 134
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 135 EQKLDPSKLQRLTEYVFHLEH 155
>gi|147798444|emb|CAN67908.1| hypothetical protein VITISV_002704 [Vitis vinifera]
Length = 197
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 74/81 (91%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK+MFQLL+SAYSTIS QDTALFLGM+EDD YV +QGWT+D ASRMLTVKKQP+VT
Sbjct: 117 LYTKKMFQLLLSAYSTISIQDTALFLGMSEDDVTNYVVEQGWTVDSASRMLTVKKQPIVT 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 177 EQKLDPSKLQRLTEYVFHLEH 197
>gi|225447785|ref|XP_002266060.1| PREDICTED: COP9 signalosome complex subunit 8 [Vitis vinifera]
gi|296081479|emb|CBI20002.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 74/81 (91%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK+MFQLL+SAYSTIS QDTALFLGM+EDD YV +QGWT+D ASRMLTVKKQP+VT
Sbjct: 117 LYTKKMFQLLLSAYSTISIQDTALFLGMSEDDVTNYVVEQGWTVDSASRMLTVKKQPIVT 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 177 EQKLDPSKLQRLTEYVFHLEH 197
>gi|255574046|ref|XP_002527939.1| cop9 signalosome complex subunit 8 (csn complex subunit 8),
putative [Ricinus communis]
gi|223532643|gb|EEF34428.1| cop9 signalosome complex subunit 8 (csn complex subunit 8),
putative [Ricinus communis]
Length = 176
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 73/81 (90%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTKRMFQLL+SAYSTIS QD AL+LGM EDDAA YV QQGW +DPAS+M+TVKKQP+VT
Sbjct: 96 LYTKRMFQLLLSAYSTISIQDAALYLGMTEDDAANYVLQQGWIVDPASQMITVKKQPIVT 155
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLD SK+Q LTEYVFHLEH
Sbjct: 156 EQKLDSSKLQWLTEYVFHLEH 176
>gi|29468343|gb|AAO85511.1| CSN8 [Nicotiana benthamiana]
Length = 197
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 72/81 (88%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LY KRMF+LL+SAYSTIS QDTA FLGMNE+DA YV QQGW LDPAS+MLTVKKQ +VT
Sbjct: 117 LYRKRMFELLLSAYSTISPQDTAQFLGMNENDATNYVLQQGWVLDPASQMLTVKKQAVVT 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLDPSK+Q LTEYVFHLEH
Sbjct: 177 EQKLDPSKLQRLTEYVFHLEH 197
>gi|224054304|ref|XP_002298193.1| predicted protein [Populus trichocarpa]
gi|222845451|gb|EEE82998.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/81 (80%), Positives = 70/81 (86%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
+YTKRMFQLL+SAYSTIS QDTALFLGMNEDDA YV QQGW +DP SRML VKKQ + T
Sbjct: 119 VYTKRMFQLLLSAYSTISIQDTALFLGMNEDDATSYVLQQGWVVDPDSRMLIVKKQSVKT 178
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLD SK+Q LTEYVFHLEH
Sbjct: 179 EQKLDSSKLQRLTEYVFHLEH 199
>gi|356534795|ref|XP_003535937.1| PREDICTED: LOW QUALITY PROTEIN: COP9 signalosome complex subunit
8-like [Glycine max]
Length = 199
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 69/81 (85%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LY K MFQLL+SAYS IS +DTALFLGMNEDDA YV QQGWT+DP SRML VKKQP VT
Sbjct: 119 LYAKEMFQLLLSAYSMISIKDTALFLGMNEDDATNYVLQQGWTVDPTSRMLIVKKQPAVT 178
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
+QKLDPSK+Q LTE VFHLEH
Sbjct: 179 QQKLDPSKLQRLTEXVFHLEH 199
>gi|1256771|gb|AAA96516.1| COP9 [Spinacia oleracea]
Length = 204
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 71/79 (89%)
Query: 3 TKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQ 62
TK+MFQLL++AYSTIS QDTALFLGM+ED+A YV Q+GW LD A+RMLTVKKQ +VTEQ
Sbjct: 126 TKKMFQLLVAAYSTISVQDTALFLGMSEDEATTYVLQEGWILDSAARMLTVKKQTIVTEQ 185
Query: 63 KLDPSKMQCLTEYVFHLEH 81
KLDPSK+Q LTEYVFHLEH
Sbjct: 186 KLDPSKLQRLTEYVFHLEH 204
>gi|357445651|ref|XP_003593103.1| COP9 signalosome complex subunit [Medicago truncatula]
gi|355482151|gb|AES63354.1| COP9 signalosome complex subunit [Medicago truncatula]
gi|388496418|gb|AFK36275.1| unknown [Medicago truncatula]
gi|388500090|gb|AFK38111.1| unknown [Medicago truncatula]
Length = 197
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 70/81 (86%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK +FQLL+SAYSTIS +D ALFLGM++D A YV QQGWT+D ASRMLTVKKQP+V+
Sbjct: 117 LYTKEIFQLLVSAYSTISVEDAALFLGMSDDGATSYVLQQGWTVDNASRMLTVKKQPVVS 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
QKLDP K+Q LTEYVFHLEH
Sbjct: 177 VQKLDPCKLQQLTEYVFHLEH 197
>gi|217073194|gb|ACJ84956.1| unknown [Medicago truncatula]
Length = 197
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 70/81 (86%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTK +FQLL+SAYSTIS +D ALFLGM++D A YV QQGWT+D ASRMLTVKKQP+V+
Sbjct: 117 LYTKGIFQLLVSAYSTISVEDAALFLGMSDDGATSYVLQQGWTVDNASRMLTVKKQPVVS 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
QKLDP K+Q LTEYVFHLEH
Sbjct: 177 VQKLDPCKLQQLTEYVFHLEH 197
>gi|47027022|gb|AAT08726.1| multisubunit regulator protein COP9 [Hyacinthus orientalis]
Length = 177
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 66/80 (82%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
YTKRMFQLL+SAYSTIS DTA FLGM+EDDA Y Q GWTLD +S MLTVKK +VT+
Sbjct: 98 YTKRMFQLLLSAYSTISVTDTAHFLGMSEDDATSYALQHGWTLDSSSNMLTVKKPSVVTQ 157
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTEYVFHLEH
Sbjct: 158 QKLDTSKLQRLTEYVFHLEH 177
>gi|449444681|ref|XP_004140102.1| PREDICTED: COP9 signalosome complex subunit 8-like [Cucumis
sativus]
Length = 197
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 66/81 (81%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LY +RMFQLL+SAYSTIS DTA FLGMNE++ YV QQGW +D AS+M TVKKQ V+
Sbjct: 117 LYRRRMFQLLVSAYSTISVHDTAQFLGMNEEEVTVYVTQQGWIIDLASQMFTVKKQETVS 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQKLD SK+Q LTEYVFHLEH
Sbjct: 177 EQKLDSSKLQRLTEYVFHLEH 197
>gi|398631261|gb|AFO85469.1| COP9 signalosome complex subunit 8 [Brassica napus]
Length = 197
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 68/81 (83%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
+YTKRMFQLL+SAYSTI+ +D ALFLGM EDDA YV + GWT+D AS+M+TVKKQ +
Sbjct: 117 VYTKRMFQLLLSAYSTIAIRDLALFLGMTEDDATTYVVENGWTVDTASQMVTVKKQAVKR 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQK+D SK+Q LTEYVFHLEH
Sbjct: 177 EQKVDSSKLQRLTEYVFHLEH 197
>gi|15236410|ref|NP_193147.1| COP9 signalosome complex subunit 8 [Arabidopsis thaliana]
gi|1169013|sp|P43255.1|CSN8_ARATH RecName: Full=COP9 signalosome complex subunit 8; Short=CSN complex
subunit 8; AltName: Full=Constitutive photomorphogenesis
protein 9; AltName: Full=Protein FUSCA 7
gi|18056673|gb|AAL58110.1|AF395067_1 CSN complex subunit 8 [Arabidopsis thaliana]
gi|530870|gb|AAA32773.1| CSN8 [Arabidopsis thaliana]
gi|2244767|emb|CAB10190.1| COP9 protein [Arabidopsis thaliana]
gi|7268116|emb|CAB78453.1| COP9 protein [Arabidopsis thaliana]
gi|332657976|gb|AEE83376.1| COP9 signalosome complex subunit 8 [Arabidopsis thaliana]
Length = 197
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 66/81 (81%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTKRMFQLL+SAYSTI+ D ALFLGM EDDA YV + GWT+D AS+M +VKKQ +
Sbjct: 117 LYTKRMFQLLLSAYSTITIHDLALFLGMTEDDATTYVVENGWTVDAASQMASVKKQAVKR 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQK+D SK+Q LTEYVFHLEH
Sbjct: 177 EQKVDSSKLQRLTEYVFHLEH 197
>gi|297800858|ref|XP_002868313.1| hypothetical protein ARALYDRAFT_915486 [Arabidopsis lyrata subsp.
lyrata]
gi|297314149|gb|EFH44572.1| hypothetical protein ARALYDRAFT_915486 [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 66/81 (81%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTKRMFQLL+SAYSTI+ D ALFLGM EDDA YV + GWT+D S+M+TVKK+ +
Sbjct: 117 LYTKRMFQLLLSAYSTITIHDLALFLGMTEDDATTYVVENGWTVDATSQMVTVKKEAVKR 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQK+D SK+Q LTEYVFHLEH
Sbjct: 177 EQKVDSSKLQRLTEYVFHLEH 197
>gi|312281795|dbj|BAJ33763.1| unnamed protein product [Thellungiella halophila]
Length = 197
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 65/81 (80%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LYTKRMFQLL+SAYSTI+ D ALFLGM E+DA YV + GW +D S+M+TVKKQ +
Sbjct: 117 LYTKRMFQLLLSAYSTITISDVALFLGMTENDATTYVVENGWIVDATSQMVTVKKQAVKR 176
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
EQK+D SK+Q LTEYVFHLEH
Sbjct: 177 EQKVDSSKLQRLTEYVFHLEH 197
>gi|116784467|gb|ABK23353.1| unknown [Picea sitchensis]
gi|116794272|gb|ABK27075.1| unknown [Picea sitchensis]
Length = 198
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 64/80 (80%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
YTKR F+LL++AYSTIS DTA FLGM++DDA Y Q+GWTLD AS+MLTVKK P V +
Sbjct: 119 YTKRAFELLLAAYSTISVADTAQFLGMSKDDALAYTLQRGWTLDSASQMLTVKKMPAVVD 178
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
Q+L S +Q LTEYVFHLEH
Sbjct: 179 QRLHSSTLQNLTEYVFHLEH 198
>gi|115458410|ref|NP_001052805.1| Os04g0428900 [Oryza sativa Japonica Group]
gi|113564376|dbj|BAF14719.1| Os04g0428900 [Oryza sativa Japonica Group]
gi|215692452|dbj|BAG87872.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708687|dbj|BAG93956.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194854|gb|EEC77281.1| hypothetical protein OsI_15914 [Oryza sativa Indica Group]
gi|222628878|gb|EEE61010.1| hypothetical protein OsJ_14828 [Oryza sativa Japonica Group]
Length = 196
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 60/80 (75%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y KR+FQLL SAYSTIS D A F+GMNE+DA Y Q GW+LD A+RMLTV K + T
Sbjct: 117 YRKRIFQLLTSAYSTISVADVAHFMGMNEEDATNYAMQNGWSLDAAARMLTVVKPKVKTN 176
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLEH
Sbjct: 177 QKLDASKLQRLTECVFHLEH 196
>gi|357163480|ref|XP_003579745.1| PREDICTED: COP9 signalosome complex subunit 8-like [Brachypodium
distachyon]
Length = 196
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 60/80 (75%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y KR+F+LL SAYSTI D + F+GM+E+DA Y Q GW+LD A++MLTV+KQ T
Sbjct: 117 YRKRIFELLTSAYSTIIVADVSHFMGMSEEDATNYAVQNGWSLDAATKMLTVRKQKAQTN 176
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLEH
Sbjct: 177 QKLDASKLQRLTECVFHLEH 196
>gi|414587241|tpg|DAA37812.1| TPA: hypothetical protein ZEAMMB73_586947 [Zea mays]
Length = 147
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 59/80 (73%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y +R+F+LL SAYSTI D A F+GM+E+DA Y Q GW+LD A++MLTVKK T
Sbjct: 68 YRQRIFKLLTSAYSTIRVADVAHFMGMSEEDATNYAVQNGWSLDAAAKMLTVKKPKSQTN 127
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLE+
Sbjct: 128 QKLDASKLQRLTECVFHLEN 147
>gi|226529593|ref|NP_001141592.1| hypothetical protein [Zea mays]
gi|194705200|gb|ACF86684.1| unknown [Zea mays]
gi|414587243|tpg|DAA37814.1| TPA: hypothetical protein ZEAMMB73_586947 [Zea mays]
Length = 196
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 59/80 (73%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y +R+F+LL SAYSTI D A F+GM+E+DA Y Q GW+LD A++MLTVKK T
Sbjct: 117 YRQRIFKLLTSAYSTIRVADVAHFMGMSEEDATNYAVQNGWSLDAAAKMLTVKKPKSQTN 176
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLE+
Sbjct: 177 QKLDASKLQRLTECVFHLEN 196
>gi|414587244|tpg|DAA37815.1| TPA: hypothetical protein ZEAMMB73_586947 [Zea mays]
Length = 177
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 59/80 (73%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y +R+F+LL SAYSTI D A F+GM+E+DA Y Q GW+LD A++MLTVKK T
Sbjct: 98 YRQRIFKLLTSAYSTIRVADVAHFMGMSEEDATNYAVQNGWSLDAAAKMLTVKKPKSQTN 157
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLE+
Sbjct: 158 QKLDASKLQRLTECVFHLEN 177
>gi|226498148|ref|NP_001147342.1| LOC100280950 [Zea mays]
gi|195610310|gb|ACG26985.1| COP9 signalosome complex subunit 8 [Zea mays]
gi|413918319|gb|AFW58251.1| COP9 signalosome complex subunit 8 [Zea mays]
Length = 196
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 58/80 (72%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y +R+F+LL SAYSTIS D A F+GM+E+DA Y Q GW+L A++MLTVKK
Sbjct: 117 YRQRIFKLLTSAYSTISVADVAHFMGMSEEDATNYAVQIGWSLGAATKMLTVKKPKAQIN 176
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLEH
Sbjct: 177 QKLDASKLQRLTECVFHLEH 196
>gi|242075804|ref|XP_002447838.1| hypothetical protein SORBIDRAFT_06g016660 [Sorghum bicolor]
gi|241939021|gb|EES12166.1| hypothetical protein SORBIDRAFT_06g016660 [Sorghum bicolor]
Length = 196
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
Y +R+F+LL SAYSTIS D A F+GM+E+D Y Q W+LD A+ MLTVKK T
Sbjct: 117 YRQRIFKLLTSAYSTISVADVAHFMGMSEEDVTNYAVQNSWSLDAATGMLTVKKPKAQTN 176
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD SK+Q LTE VFHLEH
Sbjct: 177 QKLDSSKLQRLTECVFHLEH 196
>gi|302809673|ref|XP_002986529.1| hypothetical protein SELMODRAFT_182492 [Selaginella moellendorffii]
gi|300145712|gb|EFJ12386.1| hypothetical protein SELMODRAFT_182492 [Selaginella moellendorffii]
Length = 211
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+++++F+LL +AYST+S D A F G+ E + +QQGW LDP S+M V+ P E
Sbjct: 132 FSRKIFRLLSTAYSTLSIPDAASFFGLTESETIALAEQQGWILDPTSQMFNVRSIPPTAE 191
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD S +Q LTEYVFHLEH
Sbjct: 192 QKLDTSNLQNLTEYVFHLEH 211
>gi|302763055|ref|XP_002964949.1| hypothetical protein SELMODRAFT_143083 [Selaginella moellendorffii]
gi|300167182|gb|EFJ33787.1| hypothetical protein SELMODRAFT_143083 [Selaginella moellendorffii]
Length = 211
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+++++F+LL +AYST+S D A F G+ E + +QQGW LDP S+M V+ P E
Sbjct: 132 FSRKIFRLLSTAYSTLSIPDAASFFGLTESETIALAEQQGWILDPTSQMFNVRAIPPTAE 191
Query: 62 QKLDPSKMQCLTEYVFHLEH 81
QKLD S +Q LTEYVFHLEH
Sbjct: 192 QKLDTSNLQNLTEYVFHLEH 211
>gi|168026635|ref|XP_001765837.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683014|gb|EDQ69428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 170
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYV-QQQGWTLDPASRMLTVKKQPLVT 60
Y+ M +LL +AYST+S D + FLG++E++ ++ QQ GW LDPAS+MLTV+ V
Sbjct: 90 YSSCMLRLLSTAYSTVSVADASGFLGLSENETVTFLTQQHGWVLDPASQMLTVRPMSSVV 149
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
+K D S++Q LTEYVFHLEH
Sbjct: 150 NKKADSSQLQDLTEYVFHLEH 170
>gi|26452097|dbj|BAC43138.1| putative COP9 protein [Arabidopsis thaliana]
gi|30102758|gb|AAP21297.1| At4g14110 [Arabidopsis thaliana]
Length = 54
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 28 MNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPSKMQCLTEYVFHLEH 81
M EDDA YV + GWT+D AS+M +VKKQ + EQK+D SK+Q LTEYVFHLEH
Sbjct: 1 MTEDDATTYVVENGWTVDAASQMASVKKQAVKREQKVDSSKLQRLTEYVFHLEH 54
>gi|413918317|gb|AFW58249.1| hypothetical protein ZEAMMB73_518665 [Zea mays]
Length = 56
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 26 LGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPSKMQCLTEYVFHLEH 81
+GM+E+DA Y Q GW+L A++MLTVKK QKLD SK+Q LTE VFHLEH
Sbjct: 1 MGMSEEDATNYAVQIGWSLGAATKMLTVKKPKAQINQKLDASKLQRLTECVFHLEH 56
>gi|440799891|gb|ELR20934.1| COP9 subunit 8, putative [Acanthamoeba castellanii str. Neff]
Length = 202
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+ +R F+L+ SAYS IST D A+ LG++E DA Q GWT D AS +V +P+V E
Sbjct: 122 FRERTFKLISSAYSNISTGDLAVLLGLSEQDAITLAVQHGWTHDAASG--SVAPRPIVPE 179
Query: 62 QKLDPS--KMQCLTEYVFHLEH 81
+ S ++Q LT+YV LE
Sbjct: 180 TRQGASLDQLQQLTDYVCFLEE 201
>gi|384252179|gb|EIE25655.1| hypothetical protein COCSUDRAFT_46323 [Coccomyxa subellipsoidea
C-169]
Length = 1978
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 7 FQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDP 66
QLL +YSTIS A LG +E + V+Q+GW LDPA+ M V+++ + + D
Sbjct: 1902 LQLLSRSYSTISPAKAATLLGASEAELPPLVEQEGWKLDPATNMFKVEERVVEDADRADV 1961
Query: 67 SKMQCLTEYVFHLE 80
++ L+ Y+ HLE
Sbjct: 1962 QHLERLSRYMVHLE 1975
>gi|387915374|gb|AFK11296.1| COP9 signalosome complex subunit 8 [Callorhinchus milii]
gi|392880702|gb|AFM89183.1| COP9 signalosome complex subunit 8 [Callorhinchus milii]
Length = 193
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK-QPLVTEQ 62
+R F L+ AY++IS D A F+G+ D+A V +QGW DP +RM+ KK + L Q
Sbjct: 115 RRAFGLVAQAYTSISADDLAAFVGLVVDEAVKAVLEQGWQADPTTRMVVPKKAESLPVPQ 174
Query: 63 KLDPSKMQCLTEYVFHLEH 81
+ ++ LT+YV LE+
Sbjct: 175 IPNEQQLARLTDYVAFLEN 193
>gi|330846312|ref|XP_003294983.1| hypothetical protein DICPUDRAFT_160083 [Dictyostelium purpureum]
gi|325074430|gb|EGC28488.1| hypothetical protein DICPUDRAFT_160083 [Dictyostelium purpureum]
Length = 199
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 LYTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVT 60
LY R F L+ AYS+I+ D + FLG++ DD + +GWT D S T+K P+
Sbjct: 118 LYQSRTFNLISDAYSSITVNDCSSFLGLSNDDTISFTTSKGWTFDKESN--TLKPIPIPK 175
Query: 61 EQKLDPS---KMQCLTEYVFHLE 80
PS +++ L +YV LE
Sbjct: 176 ISSASPSGNEQIKSLADYVLFLE 198
>gi|260806147|ref|XP_002597946.1| hypothetical protein BRAFLDRAFT_280755 [Branchiostoma floridae]
gi|229283216|gb|EEN53958.1| hypothetical protein BRAFLDRAFT_280755 [Branchiostoma floridae]
Length = 188
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 9 LLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK-QPLVTEQKLDPS 67
L+ AYS+IS +D A FLGM+ D+A V ++GW DP +RM+T KK P +
Sbjct: 115 LVAQAYSSISAEDLAAFLGMSVDEAVKAVVERGWQADPQTRMVTPKKPAPAAVPPRESSQ 174
Query: 68 KMQCLTEYVFHLEH 81
+Q T+ V LE+
Sbjct: 175 HLQQFTDLVAFLEN 188
>gi|410897411|ref|XP_003962192.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 2
[Takifugu rubripes]
Length = 198
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK---QPLVT 60
+R + L+ AY++IS +D A F+G + ++A V QGW DPA+RM+ KK PL T
Sbjct: 113 QRAYSLVAQAYTSISAEDFAAFVGYSVEEAVKGVVSQGWQADPATRMVMPKKPASPPLST 172
Query: 61 EQ---KLDPSKMQC--LTEYVFHLEH 81
+ L P++ Q LT+YV LE+
Sbjct: 173 DPPPVSLVPNEQQLARLTDYVAFLEN 198
>gi|410897409|ref|XP_003962191.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 1
[Takifugu rubripes]
Length = 191
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R + L+ AY++IS +D A F+G + ++A V QGW DPA+RM+ KK P
Sbjct: 113 QRAYSLVAQAYTSISAEDFAAFVGYSVEEAVKGVVSQGWQADPATRMVMPKK-PDPPPVS 171
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 172 LVPNEQQLARLTDYVAFLEN 191
>gi|328870823|gb|EGG19196.1| COP9 signalosome complex subunit 8 [Dictyostelium fasciculatum]
Length = 198
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+ +R+F L+ ++YS IS +D +L+LG++ ++ + Q GW DP+S +VK P+
Sbjct: 116 FQRRVFDLISNSYSNISIKDASLYLGISPEEVVRFTQTNGWEKDPSSD--SVKPVPVKPV 173
Query: 62 QKLDPS--KMQCLTEYVFHL 79
+++ K+ LT+Y+ H+
Sbjct: 174 EQVGNGTKKIHSLTDYIKHV 193
>gi|45360861|ref|NP_989106.1| COP9 signalosome complex subunit 8 [Xenopus (Silurana) tropicalis]
gi|55976435|sp|Q6P637.1|CSN8_XENTR RecName: Full=COP9 signalosome complex subunit 8; Short=Signalosome
subunit 8
gi|38566156|gb|AAH62497.1| COP9 constitutive photomorphogenic homolog subunit 8 [Xenopus
(Silurana) tropicalis]
gi|89268998|emb|CAJ81631.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Xenopus (Silurana) tropicalis]
Length = 193
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++IS D A F+G++ ++A V +QGW D A+RM+ KK P
Sbjct: 115 RRAFGLVSQAYTSISADDFAAFVGLSVEEAVKGVIEQGWQADLATRMVMPKK-PDSAPLS 173
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 174 LIPNEQQLARLTDYVAFLEN 193
>gi|156373078|ref|XP_001629361.1| predicted protein [Nematostella vectensis]
gi|156216359|gb|EDO37298.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ----- 56
+ ++F+L AY++I D A +LGM DA QGWTLD AS L K+
Sbjct: 107 FQDKVFRLCERAYTSIKKDDLAAYLGMTVTDAVSVAVSQGWTLDSASGFLAPKRSEPVTK 166
Query: 57 --PLVTEQKLDPSKMQCLTEYVFHLEH 81
PL +EQ+L LT+YV LE+
Sbjct: 167 DIPLTSEQEL-----ALLTDYVSFLEN 188
>gi|225707188|gb|ACO09440.1| COP9 signalosome complex subunit 8 [Osmerus mordax]
Length = 198
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R + L+ AY++I+ +D A F+G + ++A V QGW DPA+RM+ +K P
Sbjct: 120 RRAYGLVAQAYTSITAEDLAAFVGYSVEEAVKGVVSQGWQADPATRMVMPQK-PDPPPVS 178
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 179 LVPNEQQLARLTDYVAFLEN 198
>gi|148229310|ref|NP_001087802.1| COP9 constitutive photomorphogenic homolog subunit 8 [Xenopus
laevis]
gi|51895832|gb|AAH81245.1| Cops8-prov protein [Xenopus laevis]
Length = 193
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++IS D A F+G+ ++A V +QGW D A+RM+ KK P
Sbjct: 115 RRAFGLVSQAYTSISVDDFASFVGLPVEEAVKGVLEQGWQADSATRMVMPKK-PDSAPLS 173
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 174 LIPNEQQLARLTDYVAFLEN 193
>gi|226443272|ref|NP_001139878.1| COP9 signalosome complex subunit 8 [Salmo salar]
gi|221219588|gb|ACM08455.1| COP9 signalosome complex subunit 8 [Salmo salar]
Length = 191
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R + L+ AY++I+ +D A F+G + ++A V QGW DPA+RM+ +K P
Sbjct: 113 RRAYGLVAQAYTSITAEDFAAFVGYSVEEAVKGVVSQGWQADPATRMVMPQK-PDPPPVS 171
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 172 LVPNEQQLARLTDYVAFLEN 191
>gi|115898671|ref|XP_791901.2| PREDICTED: COP9 signalosome complex subunit 8-like, partial
[Strongylocentrotus purpuratus]
Length = 168
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R+FQL+ + Y++I A +LGM+++ A VQ++GW+ + ++M+ KK P+ + +
Sbjct: 90 QRLFQLVGNTYTSIEDDQFASYLGMSKEQAINAVQEEGWSYNSTTQMILPKK-PVPSREA 148
Query: 64 LDPSKMQC--LTEYVFHLEH 81
PS+ Q LTE+V LE+
Sbjct: 149 PAPSEQQIAQLTEFVAFLEN 168
>gi|390342611|ref|XP_001185403.2| PREDICTED: COP9 signalosome complex subunit 8-like
[Strongylocentrotus purpuratus]
Length = 187
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R+FQL+ + Y++I A +LGM+++ A VQ++GW+ + ++M+ KK P+ + +
Sbjct: 109 QRLFQLVGNTYTSIEDDQFASYLGMSKEQAINAVQEEGWSYNSTTQMILPKK-PVPSREA 167
Query: 64 LDPSKMQC--LTEYVFHLEH 81
PS+ Q LTE+V LE+
Sbjct: 168 PAPSEQQIAQLTEFVAFLEN 187
>gi|443694148|gb|ELT95352.1| hypothetical protein CAPTEDRAFT_154607 [Capitella teleta]
Length = 192
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK--QPLVTE 61
KR L+ AYS+I + A + G+ ++ V + GWT DP SRM+T KK +P E
Sbjct: 114 KRALMLVAQAYSSIKADECAAYAGLPVNETVDVVVEMGWTADPHSRMITPKKIDKP---E 170
Query: 62 QKLDPSK--MQCLTEYVFHLE 80
+ + PS+ M LTEYV LE
Sbjct: 171 ETIMPSEQQMNKLTEYVSVLE 191
>gi|348528887|ref|XP_003451947.1| PREDICTED: COP9 signalosome complex subunit 8-like [Oreochromis
niloticus]
Length = 191
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R + L+ AY++I+ +D A F+G + ++A V QGW DP +RM+ KK P
Sbjct: 113 QRAYSLVAQAYTSITAEDFAAFVGYSVEEAVKGVVSQGWQADPNTRMVMPKK-PDPPPVS 171
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 172 LVPNEQQLARLTDYVAFLEN 191
>gi|432930306|ref|XP_004081422.1| PREDICTED: COP9 signalosome complex subunit 8-like [Oryzias
latipes]
Length = 191
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRM-LTVKKQPLVTEQ 62
+R + L+ AY++I+ +D A F+G + ++A V QGW DP +RM + +K P
Sbjct: 113 QRAYSLVAQAYTSITAEDFAAFVGYSVEEAVKGVVSQGWQADPTTRMVMPIKPDPPPVSL 172
Query: 63 KLDPSKMQCLTEYVFHLEH 81
+ ++ LT+YV LE+
Sbjct: 173 VPNEQQLARLTDYVAFLEN 191
>gi|41055478|ref|NP_956523.1| COP9 signalosome complex subunit 8 [Danio rerio]
gi|55976498|sp|Q7ZUZ0.1|CSN8_DANRE RecName: Full=COP9 signalosome complex subunit 8; Short=Signalosome
subunit 8
gi|28374344|gb|AAH46071.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Danio rerio]
gi|47938023|gb|AAH71487.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Danio rerio]
Length = 191
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R + L+ AY++IS +D A F+G + ++A V GW DP +RM+ +K P
Sbjct: 113 RRAYGLVAQAYTSISAEDFAAFVGYSVEEAVKGVVSHGWQADPNTRMIMPQK-PDPPPVS 171
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 172 LVPNEQQLARLTDYVAFLEN 191
>gi|147903441|ref|NP_001085491.1| COP9 signalosome complex subunit 8 [Xenopus laevis]
gi|49117912|gb|AAH72840.1| MGC80215 protein [Xenopus laevis]
Length = 188
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++IS D A F+G+ ++A V +QGW D A+ M+ KK P
Sbjct: 110 QRAFGLVSQAYTSISADDFAAFVGLPVEEAVKGVLEQGWQADSATGMVMPKK-PDSAPLS 168
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 169 LIPNEQQLARLTDYVAFLEN 188
>gi|55976404|sp|Q6GQA6.2|CSN8_XENLA RecName: Full=COP9 signalosome complex subunit 8; Short=Signalosome
subunit 8
Length = 195
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++IS D A F+G+ ++A V +QGW D A+ M+ KK P
Sbjct: 117 QRAFGLVSQAYTSISADDFAAFVGLPVEEAVKGVLEQGWQADSATGMVMPKK-PDSAPLS 175
Query: 64 LDPSKMQC--LTEYVFHLEH 81
L P++ Q LT+YV LE+
Sbjct: 176 LIPNEQQLARLTDYVAFLEN 195
>gi|442756087|gb|JAA70203.1| Putative cop9 signalosome subunit csn8 [Ixodes ricinus]
Length = 195
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R L+ AYS+IS D + FLG++ A V GW +D AS M+ K +V ++
Sbjct: 117 RRALTLVAKAYSSISLDDVSSFLGVSRAQVADVVNPLGWVVDTASGMVA-PKYTVVRHEE 175
Query: 64 LDPSKMQC--LTEYVFHLEH 81
PS+ Q LT++V LE+
Sbjct: 176 FTPSEEQLAKLTDFVAFLEN 195
>gi|431912232|gb|ELK14369.1| COP9 signalosome complex subunit 8 [Pteropus alecto]
Length = 209
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I +D A F+G+ ++A + +QGW D +RM+T KK
Sbjct: 115 RRAFTLVSQAYTSIVAEDFAAFVGLPVEEAVKGILEQGWQADSTTRMVTPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 PFHGFAPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|327260745|ref|XP_003215194.1| PREDICTED: COP9 signalosome complex subunit 8-like [Anolis
carolinensis]
Length = 209
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK-------- 55
+R F L+ AY++IS D A F+G+ ++A V QGW D ++RM+ KK
Sbjct: 117 QRAFGLVSQAYTSISADDFAAFVGLPVEEAVKGVLDQGWQADSSTRMVMPKKPGPQEPSF 176
Query: 56 ---QPLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 177 NRFHPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|224054079|ref|XP_002192778.1| PREDICTED: COP9 signalosome complex subunit 8 [Taeniopygia guttata]
Length = 207
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++I D A F+G+ ++A V +QGW D A+RM+ KK P V E
Sbjct: 115 RRAFGLVSQAYTSIVADDFAAFVGLPVEEAVKGVLEQGWQADFATRMVMPKK-PGVLEAS 173
Query: 64 LD--------------PSKMQC--LTEYVFHLEH 81
+ P++ Q LT+YV LE+
Sbjct: 174 FNRFIPSSEPAPVPPIPNEQQLARLTDYVAFLEN 207
>gi|196002167|ref|XP_002110951.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586902|gb|EDV26955.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 145
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
R FQL+ AY +IS +D A +G++ +DA ++ WT+D S+M+ K T+ K
Sbjct: 67 NRAFQLVSRAYDSISWKDLAAIVGLSVEDAIQAATERSWTVDVDSQMIMPTKIVDDTQIK 126
Query: 64 -LDPSKMQCLTEYVFHLEH 81
+ +++ LT+YV +LE+
Sbjct: 127 NITNEQLKKLTDYVTYLEN 145
>gi|387015272|gb|AFJ49755.1| COP9 signalosome complex subunit 8-like [Crotalus adamanteus]
Length = 209
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK-------- 55
+R F L+ AY +IS D A F+G+ ++A V +GW D ++RM+ KK
Sbjct: 117 RRAFGLVSRAYPSISADDFAAFVGLPVEEAVKGVLDEGWQADSSTRMVMPKKPGPQESTF 176
Query: 56 ---QPLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 177 NRFHPLSESAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|449268711|gb|EMC79560.1| COP9 signalosome complex subunit 8, partial [Columba livia]
Length = 181
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++I D A F+G+ ++A V +QGW D ++RM+ KK P V E
Sbjct: 89 RRAFGLVSQAYTSIVADDFAAFVGLPVEEAVKGVLEQGWQADFSTRMVMPKK-PGVLEAS 147
Query: 64 LD--------------PSKMQC--LTEYVFHLEH 81
+ P++ Q LT+YV LE+
Sbjct: 148 FNRFINSSEPAPVPPIPNEQQLARLTDYVAFLEN 181
>gi|354504505|ref|XP_003514315.1| PREDICTED: COP9 signalosome complex subunit 8-like [Cricetulus
griseus]
gi|344240881|gb|EGV96984.1| COP9 signalosome complex subunit 8 [Cricetulus griseus]
Length = 209
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D A+RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSATRMVLPRKPASGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|326922357|ref|XP_003207415.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 1
[Meleagris gallopavo]
gi|326922359|ref|XP_003207416.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 2
[Meleagris gallopavo]
Length = 207
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++I D A F+G+ ++A V +QGW D ++RM+ KK P V E
Sbjct: 115 RRAFGLVSQAYTSIVADDFAAFVGLPVEEAVKGVLEQGWQADFSTRMVMPKK-PGVLEAS 173
Query: 64 LD--------------PSKMQC--LTEYVFHLEH 81
+ P++ Q LT+YV LE+
Sbjct: 174 FNRFIPSSEPAPVPPIPNEQQLARLTDYVAFLEN 207
>gi|426341143|ref|XP_004035912.1| PREDICTED: COP9 signalosome complex subunit 8-like [Gorilla gorilla
gorilla]
Length = 209
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I T D A F+G+ ++A + +QGW +D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIITDDFAAFVGLPIEEAVKGLLEQGWQVDSTTRMVLPRKPVAGALDI 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL L P ++ LT+YV LE+
Sbjct: 175 SFNKFIPLSEPAPLPPIPNEQQLARLTDYVAFLEN 209
>gi|66819954|ref|XP_643634.1| COP9 signalosome complex subunit 8 [Dictyostelium discoideum AX4]
gi|74876321|sp|Q75K24.1|CSN8_DICDI RecName: Full=COP9 signalosome complex subunit 8; Short=Signalosome
subunit 8
gi|60471530|gb|EAL69486.1| COP9 signalosome complex subunit 8 [Dictyostelium discoideum AX4]
gi|83776756|gb|ABC46700.1| COP9 signalosome complex subunit 8 [Dictyostelium discoideum]
Length = 196
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+ +R F+L+ +AYS+I+ D + +LG++ +D + + W D AS T+K P+ +
Sbjct: 114 FQQRTFELISNAYSSITVNDCSSYLGISPEDTIKFTTSKCWEHDKASN--TLKPVPIQKQ 171
Query: 62 QKLDPS---KMQCLTEYVFHLE 80
P+ +++ LT YV LE
Sbjct: 172 SSELPTGNQQIRSLTSYVLFLE 193
>gi|311273314|ref|XP_003133809.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 1 [Sus
scrofa]
Length = 209
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D ++RM+ KK
Sbjct: 115 RRAFALVSQAYTSIVADDFAAFVGLPVEEAVKGVLEQGWQADSSTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEAAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|395536599|ref|XP_003770300.1| PREDICTED: COP9 signalosome complex subunit 8 [Sarcophilus
harrisii]
Length = 233
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ KK
Sbjct: 141 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVMPKKPGSLDVSF 200
Query: 57 ----PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 201 NRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 233
>gi|126314588|ref|XP_001362437.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 1
[Monodelphis domestica]
Length = 208
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ KK
Sbjct: 116 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLKQGWQADSTTRMVMPKKPGSLDVSF 175
Query: 57 ----PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 176 NRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 208
>gi|417397139|gb|JAA45603.1| Putative cop9 signalosome complex subunit 8 [Desmodus rotundus]
Length = 209
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ KK
Sbjct: 115 RRAFTLVSQAYTSIVADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 PFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|325303290|tpg|DAA34781.1| TPA_inf: COP9 signalosome subunit CSN8 [Amblyomma variegatum]
Length = 194
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R+ L+ AYS+IS D + FLG+ + D A V GW +D AS M+ + K +
Sbjct: 116 RRVLTLVAKAYSSISLDDASSFLGVPKLDLAAVVSPLGWVVDVASGMV-LPKYTAARHED 174
Query: 64 LDPSKMQC--LTEYVFHLEH 81
PS+ Q LT++V LE+
Sbjct: 175 STPSEEQLAKLTDFVAFLEN 194
>gi|126314590|ref|XP_001362520.1| PREDICTED: COP9 signalosome complex subunit 8-like isoform 2
[Monodelphis domestica]
Length = 210
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ KK
Sbjct: 116 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLKQGWQADSTTRMVMPKKPGSGSLDV 175
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 176 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 210
>gi|19526372|gb|AAL89689.1|AF482000_1 COP9 signalosome subunit 8 [Mus musculus]
Length = 209
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDV 174
Query: 57 ------PLVTEQKLDPSKMQ----CLTEYVFHLEH 81
PL + P M LT+YV LE+
Sbjct: 175 SLNRFIPLSEPAPVPPIPMSRQLARLTDYVAFLEN 209
>gi|427784913|gb|JAA57908.1| Putative cop9 signalosome subunit csn8 [Rhipicephalus pulchellus]
Length = 195
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R L+ AYS+IS D + FLG+ + + A V GW++D A+ M+ + K +V +
Sbjct: 117 RRALMLVAKAYSSISLDDASSFLGIPKLELADVVSPLGWSVDAANGMV-LPKYTVVRHED 175
Query: 64 LDPSKMQC--LTEYVFHLEH 81
PS+ Q LT++V LE+
Sbjct: 176 STPSEEQLAKLTDFVAFLEN 195
>gi|410969688|ref|XP_003991325.1| PREDICTED: COP9 signalosome complex subunit 8 [Felis catus]
Length = 160
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 66 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 125
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 126 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 160
>gi|134085765|ref|NP_001076966.1| COP9 signalosome complex subunit 8 [Bos taurus]
gi|133778205|gb|AAI23825.1| COPS8 protein [Bos taurus]
gi|296488807|tpg|DAA30920.1| TPA: COP9 signalosome subunit 8 [Bos taurus]
Length = 209
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|426215101|ref|XP_004001816.1| PREDICTED: COP9 signalosome complex subunit 8 [Ovis aries]
Length = 209
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|73994194|ref|XP_534612.2| PREDICTED: COP9 signalosome complex subunit 8 [Canis lupus
familiaris]
Length = 209
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|301788842|ref|XP_002929838.1| PREDICTED: COP9 signalosome complex subunit 8-like [Ailuropoda
melanoleuca]
gi|281344917|gb|EFB20501.1| hypothetical protein PANDA_020133 [Ailuropoda melanoleuca]
Length = 209
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|114158697|ref|NP_001041472.1| COP9 signalosome complex subunit 8 [Gallus gallus]
Length = 207
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R F L+ AY++I D A F+G+ ++A V +QGW D ++RM+ KK P V +
Sbjct: 115 RRAFGLVSQAYTSIVADDFAAFVGLPVEEAVKGVLEQGWQADFSTRMVMPKK-PGVLDAS 173
Query: 64 LD--------------PSKMQC--LTEYVFHLEH 81
+ P++ Q LT+YV LE+
Sbjct: 174 FNRFIPSSEPAPVPPIPNEQQLARLTDYVAFLEN 207
>gi|432107217|gb|ELK32631.1| COP9 signalosome complex subunit 8 [Myotis davidii]
Length = 209
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|346472199|gb|AEO35944.1| hypothetical protein [Amblyomma maculatum]
Length = 195
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R L+ AYS+IS D + FLG+ + D A V GW +D AS M+ + K +
Sbjct: 117 RRALTLVAKAYSSISLDDASSFLGVPKPDLAAVVCPLGWVVDVASGMV-LPKYTAARHED 175
Query: 64 LDPSKMQC--LTEYVFHLEH 81
PS+ Q LT++V LE+
Sbjct: 176 STPSEEQLAKLTDFVAFLEN 195
>gi|194211465|ref|XP_001916454.1| PREDICTED: COP9 signalosome complex subunit 8-like [Equus caballus]
Length = 209
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 115 RRAFTLVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 PFSRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|345329179|ref|XP_001507694.2| PREDICTED: COP9 signalosome complex subunit 8-like [Ornithorhynchus
anatinus]
Length = 214
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ +DA V QGW D +RM+ +K
Sbjct: 122 RRAFGLVSQAYTSIIADDFASFVGLPVEDAVKGVLDQGWQADSTTRMVMPQKPGALDVSF 181
Query: 57 ----PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 182 NRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 214
>gi|30024961|gb|AAP13731.1|AF502144_1 COP9 signalosome subunit 8 [Mus musculus]
Length = 209
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SLNRFIPLSEPAPVPPIPTSRQLARLTDYVAFLEN 209
>gi|344292468|ref|XP_003417949.1| PREDICTED: COP9 signalosome complex subunit 8-like [Loxodonta
africana]
Length = 207
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 5 RMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ-------- 56
R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 116 RAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPGAQDVSFH 175
Query: 57 ---PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 176 RFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 207
>gi|61557351|ref|NP_001013245.1| COP9 signalosome complex subunit 8 [Rattus norvegicus]
gi|55976171|sp|Q6P4Z9.1|CSN8_RAT RecName: Full=COP9 signalosome complex subunit 8; Short=SGN8;
Short=Signalosome subunit 8; AltName: Full=COP9 homolog;
AltName: Full=JAB1-containing signalosome subunit 8
gi|38648875|gb|AAH63182.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Rattus norvegicus]
Length = 209
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPAPGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|114158691|ref|NP_598566.3| COP9 signalosome complex subunit 8 [Mus musculus]
gi|55976546|sp|Q8VBV7.1|CSN8_MOUSE RecName: Full=COP9 signalosome complex subunit 8; Short=SGN8;
Short=Signalosome subunit 8; AltName: Full=COP9 homolog;
AltName: Full=JAB1-containing signalosome subunit 8
gi|17389272|gb|AAH17690.1| Cops8 protein [Mus musculus]
gi|18204555|gb|AAH21488.1| COP9 (constitutive photomorphogenic) homolog, subunit 8
(Arabidopsis thaliana) [Mus musculus]
gi|19353496|gb|AAH24421.1| COP9 (constitutive photomorphogenic) homolog, subunit 8
(Arabidopsis thaliana) [Mus musculus]
gi|26347789|dbj|BAC37543.1| unnamed protein product [Mus musculus]
gi|26348044|dbj|BAC37670.1| unnamed protein product [Mus musculus]
gi|26353302|dbj|BAC40281.1| unnamed protein product [Mus musculus]
gi|26354837|dbj|BAC41045.1| unnamed protein product [Mus musculus]
gi|74194087|dbj|BAE36948.1| unnamed protein product [Mus musculus]
gi|74219198|dbj|BAE26735.1| unnamed protein product [Mus musculus]
gi|148708144|gb|EDL40091.1| COP9 (constitutive photomorphogenic) homolog, subunit 8
(Arabidopsis thaliana), isoform CRA_d [Mus musculus]
Length = 209
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|148708141|gb|EDL40088.1| COP9 (constitutive photomorphogenic) homolog, subunit 8
(Arabidopsis thaliana), isoform CRA_a [Mus musculus]
Length = 174
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 80 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDV 139
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 140 SLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 174
>gi|197102910|ref|NP_001124713.1| COP9 signalosome complex subunit 8 [Pongo abelii]
gi|75042602|sp|Q5RF54.1|CSN8_PONAB RecName: Full=COP9 signalosome complex subunit 8; Short=Signalosome
subunit 8
gi|55725643|emb|CAH89603.1| hypothetical protein [Pongo abelii]
Length = 209
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIVADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|148708143|gb|EDL40090.1| COP9 (constitutive photomorphogenic) homolog, subunit 8
(Arabidopsis thaliana), isoform CRA_c [Mus musculus]
Length = 199
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 105 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDV 164
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 165 SLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 199
>gi|355680628|gb|AER96587.1| COP9 constitutive photomorphogenic-like protein subunit 8 [Mustela
putorius furo]
Length = 205
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ KK
Sbjct: 112 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVMPKKPVAGALDA 171
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLE 80
PL + P ++ LT+YV LE
Sbjct: 172 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLE 205
>gi|395851544|ref|XP_003798313.1| PREDICTED: COP9 signalosome complex subunit 8 [Otolemur garnettii]
Length = 192
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK-------- 55
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 98 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGSLDV 157
Query: 56 -----QPLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 158 SFNKFSPLSEPAPVPPIPNEQQLARLTDYVAFLEN 192
>gi|351699041|gb|EHB01960.1| COP9 signalosome complex subunit 8 [Heterocephalus glaber]
Length = 209
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRIIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|291413365|ref|XP_002722944.1| PREDICTED: COP9 signalosome subunit 8 [Oryctolagus cuniculus]
Length = 209
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGAPDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|38027914|ref|NP_937832.1| COP9 signalosome complex subunit 8 isoform 2 [Homo sapiens]
gi|114584067|ref|XP_001152939.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 1 [Pan
troglodytes]
gi|297265171|ref|XP_001090380.2| PREDICTED: COP9 signalosome complex subunit 8-like [Macaca mulatta]
gi|397483963|ref|XP_003813158.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 2 [Pan
paniscus]
gi|426339021|ref|XP_004033463.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 2 [Gorilla
gorilla gorilla]
gi|119591504|gb|EAW71098.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis),
isoform CRA_b [Homo sapiens]
gi|158260805|dbj|BAF82580.1| unnamed protein product [Homo sapiens]
Length = 160
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 66 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDV 125
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 126 SFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 160
>gi|348577703|ref|XP_003474623.1| PREDICTED: COP9 signalosome complex subunit 8-like [Cavia
porcellus]
Length = 209
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SLNRIIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|5729779|ref|NP_006701.1| COP9 signalosome complex subunit 8 isoform 1 [Homo sapiens]
gi|55619467|ref|XP_516177.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 2 [Pan
troglodytes]
gi|296205950|ref|XP_002750001.1| PREDICTED: COP9 signalosome complex subunit 8 [Callithrix jacchus]
gi|332256813|ref|XP_003277511.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 1 [Nomascus
leucogenys]
gi|397483961|ref|XP_003813157.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 1 [Pan
paniscus]
gi|397483965|ref|XP_003813159.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 3 [Pan
paniscus]
gi|397483967|ref|XP_003813160.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 4 [Pan
paniscus]
gi|402889778|ref|XP_003908179.1| PREDICTED: COP9 signalosome complex subunit 8 [Papio anubis]
gi|403291437|ref|XP_003936796.1| PREDICTED: COP9 signalosome complex subunit 8 [Saimiri boliviensis
boliviensis]
gi|410036372|ref|XP_003950051.1| PREDICTED: COP9 signalosome complex subunit 8 [Pan troglodytes]
gi|410036374|ref|XP_003950052.1| PREDICTED: COP9 signalosome complex subunit 8 [Pan troglodytes]
gi|426339019|ref|XP_004033462.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 1 [Gorilla
gorilla gorilla]
gi|426339023|ref|XP_004033464.1| PREDICTED: COP9 signalosome complex subunit 8 isoform 3 [Gorilla
gorilla gorilla]
gi|55976572|sp|Q99627.1|CSN8_HUMAN RecName: Full=COP9 signalosome complex subunit 8; Short=SGN8;
Short=Signalosome subunit 8; AltName: Full=COP9 homolog;
Short=hCOP9; AltName: Full=JAB1-containing signalosome
subunit 8
gi|1730284|gb|AAB38529.1| COP9 signalosome subunit 8 CSN8 [Homo sapiens]
gi|13111847|gb|AAH03090.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Homo sapiens]
gi|48146105|emb|CAG33275.1| COPS8 [Homo sapiens]
gi|51874052|gb|AAH80617.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Homo sapiens]
gi|54673566|gb|AAH36499.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[Homo sapiens]
gi|62822430|gb|AAY14978.1| unknown [Homo sapiens]
gi|119591503|gb|EAW71097.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis),
isoform CRA_a [Homo sapiens]
gi|119591505|gb|EAW71099.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis),
isoform CRA_a [Homo sapiens]
gi|312153300|gb|ADQ33162.1| COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)
[synthetic construct]
gi|355565301|gb|EHH21790.1| hypothetical protein EGK_04930 [Macaca mulatta]
gi|355750945|gb|EHH55272.1| hypothetical protein EGM_04438 [Macaca fascicularis]
gi|387541268|gb|AFJ71261.1| COP9 signalosome complex subunit 8 isoform 1 [Macaca mulatta]
gi|410211076|gb|JAA02757.1| COP9 constitutive photomorphogenic homolog subunit 8 [Pan
troglodytes]
gi|410254556|gb|JAA15245.1| COP9 constitutive photomorphogenic homolog subunit 8 [Pan
troglodytes]
gi|410330145|gb|JAA34019.1| COP9 constitutive photomorphogenic homolog subunit 8 [Pan
troglodytes]
Length = 209
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|149037636|gb|EDL92067.1| rCG55492, isoform CRA_a [Rattus norvegicus]
Length = 292
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 55
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 198 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRK 249
>gi|303271457|ref|XP_003055090.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463064|gb|EEH60342.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 209
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R L+ AY+T S A LG + DA +GW + L V K P+ +Q+
Sbjct: 123 ERALDLIARAYTTASVAHVAAALGTSAPDAIARCAARGWGVSEDGAWLDVVKPPVTEKQR 182
Query: 64 LDPSKMQCLTEYVFHL 79
+ LTE HL
Sbjct: 183 AAIDALTSLTEVTTHL 198
>gi|189066681|dbj|BAG36228.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 17/95 (17%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ------- 56
+R F L+ AY++I D A F G+ ++A + +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFAGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDV 174
Query: 57 ------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL + P ++ LT+YV LE+
Sbjct: 175 SFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
>gi|148708142|gb|EDL40089.1| COP9 (constitutive photomorphogenic) homolog, subunit 8
(Arabidopsis thaliana), isoform CRA_b [Mus musculus]
Length = 187
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 55
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRK 166
>gi|241839496|ref|XP_002415243.1| hypothetical protein IscW_ISCW013975 [Ixodes scapularis]
gi|215509455|gb|EEC18908.1| hypothetical protein IscW_ISCW013975 [Ixodes scapularis]
Length = 65
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVK 54
+R L+ AYS+IS D + FLG++ A V GW +D AS M+ K
Sbjct: 10 RRALTLVAKAYSSISLDDVSSFLGVSRAQVADVVNPLGWVVDTASGMVAPK 60
>gi|149037637|gb|EDL92068.1| rCG55492, isoform CRA_b [Rattus norvegicus]
Length = 250
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 55
+R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K
Sbjct: 156 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRK 207
>gi|348673335|gb|EGZ13154.1| hypothetical protein PHYSODRAFT_561910 [Phytophthora sojae]
Length = 228
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 8 QLLMSAYSTISTQDTALFLGM-NEDDAAYYVQQQGWTLDPASRML------TVKKQPLVT 60
+LL AYSTIS D AL LG +DA Y W ++ A +M+ V++ P
Sbjct: 144 ELLSLAYSTISVSDAALALGFARHEDAMQYCSSLNWEVNAADQMIMPKPLGNVRRGPSTV 203
Query: 61 EQKLDPSKMQCLTEYVFHLEH 81
+D +++ L++ V HLE
Sbjct: 204 ---VDLNQLDTLSKSVLHLEQ 221
>gi|440894539|gb|ELR46964.1| COP9 signalosome complex subunit 8 [Bos grunniens mutus]
Length = 209
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 55
+R F L+ AY++I D A F+G+ ++A + +QGW D R++ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTIRIVMPKK 166
>gi|296487134|tpg|DAA29247.1| TPA: COP9 signalosome subunit 8-like [Bos taurus]
gi|296487196|tpg|DAA29309.1| TPA: COP9 signalosome subunit 8-like [Bos taurus]
Length = 209
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK 55
+R F L+ AY++I D A F+G+ ++A + +QGW D R++ KK
Sbjct: 115 RRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTIRIVMPKK 166
>gi|409082211|gb|EKM82569.1| hypothetical protein AGABI1DRAFT_82333 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 254
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+ +R LL AYS++ ++LG+++D +Q GW+ D ++R+L K + T
Sbjct: 171 FRQRTLVLLSRAYSSLPLSLAQVYLGISDDQVVKATEQYGWSYDTSTRILEPKAHAISTP 230
Query: 62 QK 63
QK
Sbjct: 231 QK 232
>gi|301098882|ref|XP_002898533.1| COP9 signalosome complex subunit, putative [Phytophthora infestans
T30-4]
gi|262104958|gb|EEY63010.1| COP9 signalosome complex subunit, putative [Phytophthora infestans
T30-4]
Length = 227
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 8 QLLMSAYSTISTQDTALFLGM-NEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK--- 63
+LL AYST+S D A LG +DA Y GW + A +++ K PL ++
Sbjct: 143 ELLSLAYSTVSVSDVAFALGFARHEDAVQYCSSLGWEVSAADQLILPK--PLANIRRGNS 200
Query: 64 --LDPSKMQCLTEYVFHLEH 81
+D ++ L++ V HLE
Sbjct: 201 TVVDLDQLDTLSKTVLHLEQ 220
>gi|296424508|ref|XP_002841790.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638038|emb|CAZ85981.1| unnamed protein product [Tuber melanosporum]
Length = 217
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAY--YVQQQGWTLDPASRM----LTVKK 55
Y ++ LL AYS+IS A++LG D+ Y+ Q+GW LD + + + V++
Sbjct: 131 YRQKTVLLLSKAYSSISPVHAAVYLGFKGDETGLLEYIAQRGWLLDESGLLKPAPVEVEE 190
Query: 56 QPLVTEQKLDPSKMQCLTEYVFHL 79
+ T+ + + ++ L+ V HL
Sbjct: 191 GGMDTDAEGNDMRIAILSGLVTHL 214
>gi|426200038|gb|EKV49962.1| hypothetical protein AGABI2DRAFT_133839 [Agaricus bisporus var.
bisporus H97]
Length = 254
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTE 61
+ +R LL AYS++ ++LG++ D +Q GW+ D ++R+L K + T
Sbjct: 171 FRQRTLVLLSRAYSSLPLSLAQVYLGISGDQVVKATEQYGWSYDTSTRILEPKAHAISTP 230
Query: 62 QK 63
QK
Sbjct: 231 QK 232
>gi|114587767|ref|XP_001135161.1| PREDICTED: COP9 signalosome complex subunit 8-like [Pan
troglodytes]
Length = 209
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 3 TKR-MFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ----- 56
T+R F L+ AY++I T D A F+ + ++A + +QGW +D +RM+ +K
Sbjct: 113 TRRCAFALVSQAYTSIITDDFAAFVELPIEEAVKGLLEQGWQVDSTTRMVLPRKPVAGAL 172
Query: 57 --------PLVTEQKLDP----SKMQCLTEYVFHLEH 81
PL L P ++ LT+YV LE+
Sbjct: 173 DVSFNKFIPLSEPAPLPPIPNEQQLARLTDYVAFLEN 209
>gi|346472417|gb|AEO36053.1| hypothetical protein [Amblyomma maculatum]
Length = 195
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQK 63
+R L+ AYS+IS +G+++ + A V GW D +R + K P T +
Sbjct: 117 RRALTLVTKAYSSISVDHACSLMGIDKPELAAVVNSLGWAFD-GTRAMVFPKPPAATNE- 174
Query: 64 LDPS----KMQCLTEYVFHLEH 81
DPS + LT + LE+
Sbjct: 175 -DPSTAEEHLSKLTNFSSFLEN 195
>gi|340378391|ref|XP_003387711.1| PREDICTED: COP9 signalosome complex subunit 8-like [Amphimedon
queenslandica]
Length = 198
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 5 RMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKL 64
R+ QL+ AYS IS + LG+ A QQ WT D ++ KK T++
Sbjct: 121 RVLQLIGCAYSNISLNQFCVLLGLESQQALEVAAQQRWTFDEKVSVIYPKKTKSSTKEIE 180
Query: 65 DP-SKMQCLTEYVFHLEH 81
+P +++ L + V LE+
Sbjct: 181 EPQARLAELVDIVSFLEN 198
>gi|302690356|ref|XP_003034857.1| hypothetical protein SCHCODRAFT_84379 [Schizophyllum commune H4-8]
gi|300108553|gb|EFI99954.1| hypothetical protein SCHCODRAFT_84379 [Schizophyllum commune H4-8]
Length = 248
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRML-TVKKQP 57
+ +R FQLL AY+ + A +LG+ + Q +GW D AS++ VK +P
Sbjct: 164 FRERTFQLLSRAYTEVPLNLVATYLGLPAEQIIPAAQARGWAYDEASKVFKPVKPKP 220
>gi|392595522|gb|EIW84845.1| hypothetical protein CONPUDRAFT_162170 [Coniophora puteana
RWD-64-598 SS2]
Length = 287
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRML 51
+ +R F LL A+++I + +LGM +D QGW D A+++L
Sbjct: 201 FQQRTFTLLSKAFTSIPLSEAQAYLGMQQDQLLSIANAQGWKFDSATQIL 250
>gi|299753071|ref|XP_001833043.2| hypothetical protein CC1G_01105 [Coprinopsis cinerea okayama7#130]
gi|298410130|gb|EAU88732.2| hypothetical protein CC1G_01105 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 2 YTKRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRML 51
+ +R FQLL AYS++ +LG++ + Q GWT DP++++L
Sbjct: 176 FRRRTFQLLSQAYSSLPLSLAQDYLGVSAEVIVNEANQYGWTHDPSTQLL 225
>gi|320164721|gb|EFW41620.1| hypothetical protein CAOG_06752 [Capsaspora owczarzaki ATCC 30864]
Length = 795
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 RMFQLLMSAYSTISTQDTALFLGMNEDD-------AAYYVQQQGWTLDPASRMLTVKKQP 57
R F L+ AYSTIS D A LG++E + A + +Q Q + + P + M K
Sbjct: 119 RAFDLVSRAYSTISVTDCAALLGLSESETLSQASAAKWQLQDQYFVIPPPATMGKKDKGA 178
Query: 58 LVTEQKLDPSKMQCLT 73
E L S Q LT
Sbjct: 179 NPAEAALKRSTTQSLT 194
>gi|169844318|ref|XP_001828880.1| hypothetical protein CC1G_03674 [Coprinopsis cinerea okayama7#130]
gi|116509992|gb|EAU92887.1| hypothetical protein CC1G_03674 [Coprinopsis cinerea okayama7#130]
Length = 240
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 30/51 (58%)
Query: 7 FQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQP 57
+ + + ++ I++Q +L ++ +D A Y+QQ GW++D ++ + V P
Sbjct: 162 IRAVTATFTHITSQRLGSYLNLDGEDLAEYIQQLGWSIDASTGNVAVPPNP 212
>gi|270008317|gb|EFA04765.1| hypothetical protein TcasGA2_TC030655 [Tribolium castaneum]
Length = 186
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 4 KRMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRML-TVKKQPLVTEQ 62
R L+ AYS+I+ + G+ D A ++GW ++ +RM+ V+ P + Q
Sbjct: 108 NRSVDLIAQAYSSITLDTVSAMTGLPPDICATACVERGWQVEADTRMVHPVRPTPQTSGQ 167
Query: 63 KLDPSKMQCLTEYVFHLEH 81
++ LT++V LE+
Sbjct: 168 TSSEDQLYKLTDFVSFLEN 186
>gi|426201573|gb|EKV51496.1| hypothetical protein AGABI2DRAFT_147838 [Agaricus bisporus var.
bisporus H97]
Length = 244
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 12 SAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQP 57
+A+ IST +L ++ DD YV + GWT+D + ++ + P
Sbjct: 170 AAFKRISTARLGSYLALSGDDFTEYVARLGWTIDSTTEVVNIPPNP 215
>gi|307110695|gb|EFN58931.1| hypothetical protein CHLNCDRAFT_13184, partial [Chlorella
variabilis]
Length = 158
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 5 RMFQLLMSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKK-QPLV-TEQ 62
+M +L+ AY+ IS A LG E +AA +GW + A ++ VK+ P V +
Sbjct: 83 QMVELVGRAYANISLGKLAALLGCGEAEAAQAAASKGWEV--ADGVVEVKQAAPTVRAGE 140
Query: 63 KLDPSKMQCLTEYVFHLE 80
+ +Q LTEYV HLE
Sbjct: 141 AVAQRSLQRLTEYVVHLE 158
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,124,905,128
Number of Sequences: 23463169
Number of extensions: 34506080
Number of successful extensions: 78934
Number of sequences better than 100.0: 133
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 78815
Number of HSP's gapped (non-prelim): 133
length of query: 81
length of database: 8,064,228,071
effective HSP length: 52
effective length of query: 29
effective length of database: 6,844,143,283
effective search space: 198480155207
effective search space used: 198480155207
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)