Query 036950
Match_columns 469
No_of_seqs 406 out of 3869
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 11:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.8E-52 9.5E-57 432.5 39.0 362 45-426 23-422 (457)
2 3jxv_A 70 kDa peptidyl-prolyl 100.0 2.2E-51 7.6E-56 410.4 24.4 273 1-274 77-355 (356)
3 1q1c_A FK506-binding protein 4 100.0 2.6E-38 8.8E-43 304.2 25.6 226 39-280 38-280 (280)
4 3jxv_A 70 kDa peptidyl-prolyl 100.0 1.4E-38 4.9E-43 317.7 10.1 221 46-276 6-238 (356)
5 2if4_A ATFKBP42; FKBP-like, al 100.0 1.3E-33 4.3E-38 281.0 16.1 248 167-422 48-331 (338)
6 1p5q_A FKBP52, FK506-binding p 100.0 3.3E-31 1.1E-35 263.3 30.1 252 162-427 19-302 (336)
7 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 1.9E-27 6.4E-32 246.1 32.1 276 1-369 97-381 (457)
8 1q1c_A FK506-binding protein 4 100.0 6.5E-28 2.2E-32 231.7 18.5 155 1-162 117-276 (280)
9 2if4_A ATFKBP42; FKBP-like, al 99.9 5.7E-23 1.9E-27 204.0 21.1 238 49-369 47-294 (338)
10 1r9h_A FKB-6, FK506 binding pr 99.9 2.3E-21 7.8E-26 165.9 14.6 121 45-171 6-134 (135)
11 3o5e_A Peptidyl-prolyl CIS-tra 99.9 2.6E-21 8.9E-26 167.4 14.6 111 45-160 27-143 (144)
12 3o5q_A Peptidyl-prolyl CIS-tra 99.9 3.7E-21 1.3E-25 163.2 14.8 111 45-160 11-127 (128)
13 3kz7_A FK506-binding protein 3 99.9 6E-21 2E-25 160.0 13.9 105 50-158 3-118 (119)
14 2jwx_A FKBP38NTD, FK506-bindin 99.8 8.6E-21 2.9E-25 165.6 12.6 109 49-162 41-151 (157)
15 2awg_A 38 kDa FK-506 binding p 99.8 2.1E-20 7.3E-25 156.3 14.1 110 45-159 7-117 (118)
16 1yat_A FK506 binding protein; 99.8 2.7E-20 9.1E-25 154.5 14.3 105 49-158 4-112 (113)
17 2f4e_A ATFKBP42; FKBP-like, al 99.8 7.6E-21 2.6E-25 170.4 11.5 124 166-291 47-180 (180)
18 3b7x_A FK506-binding protein 6 99.8 7.6E-21 2.6E-25 162.5 10.7 110 44-159 19-133 (134)
19 2ppn_A FK506-binding protein 1 99.8 3.6E-20 1.2E-24 152.2 14.2 102 52-158 1-106 (107)
20 4dip_A Peptidyl-prolyl CIS-tra 99.8 5.8E-20 2E-24 155.3 14.2 109 46-160 7-123 (125)
21 2y78_A Peptidyl-prolyl CIS-tra 99.8 5.3E-20 1.8E-24 156.8 13.9 106 47-158 24-133 (133)
22 2vn1_A 70 kDa peptidylprolyl i 99.8 1E-19 3.4E-24 154.7 15.0 109 47-160 12-127 (129)
23 1p5q_A FKBP52, FK506-binding p 99.8 1.7E-18 5.9E-23 171.5 25.9 233 45-369 19-260 (336)
24 3oe2_A Peptidyl-prolyl CIS-tra 99.8 6.8E-20 2.3E-24 167.7 13.5 104 48-159 114-218 (219)
25 1jvw_A Macrophage infectivity 99.8 1E-19 3.6E-24 160.5 14.2 109 47-163 33-146 (167)
26 2d9f_A FK506-binding protein 8 99.8 5E-20 1.7E-24 157.6 11.4 113 46-163 12-126 (135)
27 2lgo_A FKBP; infectious diseas 99.8 9.6E-20 3.3E-24 154.6 12.7 107 47-158 18-130 (130)
28 3o5e_A Peptidyl-prolyl CIS-tra 99.8 4.7E-20 1.6E-24 159.5 10.4 108 162-273 27-142 (144)
29 3kz7_A FK506-binding protein 3 99.8 7.3E-20 2.5E-24 153.4 11.2 104 167-273 3-119 (119)
30 3uf8_A Ubiquitin-like protein 99.8 4.4E-19 1.5E-23 162.7 17.1 107 46-158 99-209 (209)
31 2lkn_A AH receptor-interacting 99.8 4.6E-20 1.6E-24 161.4 8.8 83 48-130 7-96 (165)
32 2lkn_A AH receptor-interacting 99.8 3.7E-20 1.3E-24 162.0 7.5 80 166-246 8-96 (165)
33 3o5q_A Peptidyl-prolyl CIS-tra 99.8 9E-20 3.1E-24 154.6 9.4 104 166-273 17-126 (128)
34 1u79_A FKBP-type peptidyl-prol 99.8 1.7E-19 5.8E-24 153.1 11.0 110 48-158 9-128 (129)
35 2f4e_A ATFKBP42; FKBP-like, al 99.8 7.1E-19 2.4E-23 157.6 14.2 111 49-163 47-163 (180)
36 1fd9_A Protein (macrophage inf 99.8 6.6E-19 2.3E-23 161.3 14.2 106 47-160 102-211 (213)
37 1yat_A FK506 binding protein; 99.8 7.5E-19 2.6E-23 145.7 12.0 103 167-273 5-113 (113)
38 3b7x_A FK506-binding protein 6 99.8 1.5E-19 5.2E-24 154.4 6.5 108 162-273 20-133 (134)
39 2ppn_A FK506-binding protein 1 99.8 6.5E-19 2.2E-23 144.7 9.0 101 169-273 1-107 (107)
40 1jvw_A Macrophage infectivity 99.8 8.3E-19 2.8E-23 154.7 10.1 115 166-288 35-155 (167)
41 1r9h_A FKB-6, FK506 binding pr 99.8 6.8E-19 2.3E-23 150.5 9.2 109 163-275 7-123 (135)
42 1q6h_A FKBP-type peptidyl-prol 99.8 3.1E-18 1.1E-22 157.9 14.1 101 49-158 119-223 (224)
43 2lgo_A FKBP; infectious diseas 99.8 2.4E-18 8.2E-23 146.0 11.2 103 166-272 20-130 (130)
44 2y78_A Peptidyl-prolyl CIS-tra 99.8 2.7E-18 9.1E-23 146.2 10.9 103 166-272 26-133 (133)
45 2vn1_A 70 kDa peptidylprolyl i 99.8 3.6E-18 1.2E-22 145.1 11.1 106 165-274 13-127 (129)
46 3uf8_A Ubiquitin-like protein 99.8 2.1E-17 7.1E-22 151.5 16.9 188 66-272 15-209 (209)
47 4dip_A Peptidyl-prolyl CIS-tra 99.7 3.8E-18 1.3E-22 144.1 10.6 106 165-275 9-124 (125)
48 2pbc_A FK506-binding protein 2 99.7 5.6E-18 1.9E-22 137.8 11.1 92 65-161 4-99 (102)
49 3oe2_A Peptidyl-prolyl CIS-tra 99.7 1.1E-17 3.8E-22 153.1 10.9 99 166-273 115-218 (219)
50 2awg_A 38 kDa FK-506 binding p 99.7 1.2E-17 4.1E-22 139.5 10.3 103 163-273 8-117 (118)
51 2jwx_A FKBP38NTD, FK506-bindin 99.7 1.3E-17 4.3E-22 145.5 10.7 105 164-276 39-151 (157)
52 2d9f_A FK506-binding protein 8 99.7 8.8E-18 3E-22 143.6 7.8 113 163-283 12-132 (135)
53 3rkv_A Putative peptidylprolyl 99.7 2E-17 6.9E-22 145.3 8.4 132 283-418 4-161 (162)
54 1u79_A FKBP-type peptidyl-prol 99.7 1.6E-17 5.6E-22 140.9 7.0 106 166-272 10-128 (129)
55 1fd9_A Protein (macrophage inf 99.7 3E-17 1E-21 150.3 9.2 103 166-274 104-211 (213)
56 1q6h_A FKBP-type peptidyl-prol 99.7 1.2E-16 4E-21 147.4 10.0 101 166-273 119-224 (224)
57 2pbc_A FK506-binding protein 2 99.7 2.3E-16 8E-21 128.1 9.8 86 186-275 13-99 (102)
58 2fbn_A 70 kDa peptidylprolyl i 99.6 7.6E-15 2.6E-19 133.1 16.1 159 262-425 10-192 (198)
59 1hxv_A Trigger factor; FKBP fo 99.5 9.4E-15 3.2E-19 120.4 8.3 83 65-158 28-112 (113)
60 2k8i_A SLYD, peptidyl-prolyl C 99.5 2.5E-14 8.6E-19 126.3 10.6 71 67-137 3-76 (171)
61 3prb_A FKBP-type peptidyl-prol 99.5 2.4E-14 8.4E-19 131.8 7.9 70 67-137 2-88 (231)
62 2hr2_A Hypothetical protein; a 99.5 9.9E-14 3.4E-18 120.8 11.1 120 281-408 2-155 (159)
63 2kfw_A FKBP-type peptidyl-prol 99.5 9E-14 3.1E-18 125.2 11.0 72 67-138 3-77 (196)
64 4gco_A Protein STI-1; structur 99.5 2.5E-13 8.5E-18 114.4 12.4 91 288-398 11-124 (126)
65 2kr7_A FKBP-type peptidyl-prol 99.5 1.3E-13 4.3E-18 119.7 10.6 72 65-136 5-80 (151)
66 4dt4_A FKBP-type 16 kDa peptid 99.5 4.7E-14 1.6E-18 123.9 6.5 69 66-134 24-96 (169)
67 1ihg_A Cyclophilin 40; ppiase 99.5 2.2E-13 7.5E-18 136.6 12.3 132 282-418 215-370 (370)
68 3pr9_A FKBP-type peptidyl-prol 99.4 4.6E-13 1.6E-17 116.4 9.0 67 67-134 2-85 (157)
69 3cgm_A SLYD, peptidyl-prolyl C 99.4 7E-13 2.4E-17 115.6 8.8 68 67-136 3-70 (158)
70 4dt4_A FKBP-type 16 kDa peptid 99.4 9.3E-13 3.2E-17 115.6 7.7 64 186-250 32-96 (169)
71 4gcn_A Protein STI-1; structur 99.4 4.6E-12 1.6E-16 106.6 11.4 69 286-369 4-72 (127)
72 1ix5_A FKBP; ppiase, isomerase 99.3 6E-13 2.1E-17 115.4 5.8 69 66-134 1-86 (151)
73 3pr9_A FKBP-type peptidyl-prol 99.3 3.7E-12 1.3E-16 110.7 8.0 64 186-251 9-86 (157)
74 2kr7_A FKBP-type peptidyl-prol 99.2 3.1E-11 1.1E-15 104.6 10.2 63 186-250 14-78 (151)
75 3prb_A FKBP-type peptidyl-prol 99.2 2.3E-11 7.8E-16 112.0 9.2 63 186-250 9-85 (231)
76 1w26_A Trigger factor, TF; cha 99.2 4.6E-11 1.6E-15 121.4 11.4 98 65-173 156-255 (432)
77 1hxv_A Trigger factor; FKBP fo 99.2 1.9E-11 6.4E-16 100.6 6.8 74 186-272 37-112 (113)
78 2k8i_A SLYD, peptidyl-prolyl C 99.2 1.6E-10 5.6E-15 101.9 13.1 62 186-249 10-72 (171)
79 1ix5_A FKBP; ppiase, isomerase 99.2 1.5E-11 5.1E-16 106.6 6.1 65 186-251 9-87 (151)
80 2kfw_A FKBP-type peptidyl-prol 99.2 6.3E-11 2.2E-15 106.6 9.1 63 186-250 10-73 (196)
81 3upv_A Heat shock protein STI1 99.2 1.5E-10 5E-15 96.3 10.8 94 289-402 3-125 (126)
82 1t11_A Trigger factor, TF; hel 99.1 1.1E-10 3.8E-15 117.0 8.3 98 65-173 159-258 (392)
83 3sz7_A HSC70 cochaperone (SGT) 99.1 9.1E-10 3.1E-14 96.1 13.2 98 288-405 9-131 (164)
84 3cgm_A SLYD, peptidyl-prolyl C 99.0 4.7E-10 1.6E-14 97.7 8.9 58 186-250 10-68 (158)
85 3q49_B STIP1 homology and U bo 98.9 4.3E-09 1.5E-13 88.2 10.7 98 290-407 9-134 (137)
86 4ga2_A E3 SUMO-protein ligase 98.9 1.3E-08 4.4E-13 87.8 12.3 90 290-399 31-144 (150)
87 2xcb_A PCRH, regulatory protei 98.9 2E-08 6.9E-13 85.4 12.6 97 290-406 18-137 (142)
88 2vgx_A Chaperone SYCD; alterna 98.8 2.2E-08 7.4E-13 86.3 11.9 93 290-402 21-136 (148)
89 3gyz_A Chaperone protein IPGC; 98.8 2.6E-08 9.1E-13 86.3 12.2 66 289-369 35-100 (151)
90 1a17_A Serine/threonine protei 98.8 2.7E-07 9.3E-12 79.3 16.6 100 283-402 6-128 (166)
91 1elw_A TPR1-domain of HOP; HOP 98.8 6.4E-08 2.2E-12 77.8 11.2 91 289-399 3-116 (118)
92 4gyw_A UDP-N-acetylglucosamine 98.7 1E-07 3.5E-12 103.2 13.7 113 289-406 8-162 (723)
93 2dba_A Smooth muscle cell asso 98.7 1.8E-07 6.3E-12 78.7 11.9 93 290-399 28-143 (148)
94 1elr_A TPR2A-domain of HOP; HO 98.7 2.7E-07 9.2E-12 75.5 12.3 95 289-404 3-127 (131)
95 2c2l_A CHIP, carboxy terminus 98.6 1.6E-07 5.6E-12 89.7 11.8 80 290-384 4-106 (281)
96 3vtx_A MAMA; tetratricopeptide 98.6 3.1E-07 1E-11 81.0 12.4 95 290-404 5-122 (184)
97 2vyi_A SGTA protein; chaperone 98.6 4.5E-07 1.5E-11 74.0 12.3 98 285-402 7-127 (131)
98 2l6j_A TPR repeat-containing p 98.6 3.2E-07 1.1E-11 73.4 11.1 70 289-384 3-72 (111)
99 2lni_A Stress-induced-phosphop 98.6 2.4E-07 8.3E-12 76.3 10.7 91 290-400 16-129 (133)
100 3urz_A Uncharacterized protein 98.6 4.6E-07 1.6E-11 82.3 13.0 106 290-400 4-133 (208)
101 2y4t_A DNAJ homolog subfamily 98.6 1E-07 3.5E-12 96.2 9.1 158 291-467 258-441 (450)
102 1w26_A Trigger factor, TF; cha 98.6 8.4E-08 2.9E-12 97.4 8.4 74 189-274 169-242 (432)
103 1hxi_A PEX5, peroxisome target 98.6 2.5E-07 8.7E-12 76.5 9.8 95 292-418 19-113 (121)
104 4gyw_A UDP-N-acetylglucosamine 98.5 4E-07 1.4E-11 98.6 11.9 62 339-405 111-178 (723)
105 2xev_A YBGF; tetratricopeptide 98.5 7.6E-07 2.6E-11 73.3 11.0 92 291-399 3-120 (129)
106 4i17_A Hypothetical protein; T 98.5 1.4E-06 5E-11 79.5 13.8 87 291-397 8-118 (228)
107 1wao_1 Serine/threonine protei 98.5 2.7E-07 9.2E-12 95.3 9.4 96 287-402 3-121 (477)
108 3urz_A Uncharacterized protein 98.5 7.4E-07 2.5E-11 80.9 11.2 60 295-369 59-118 (208)
109 2kc7_A BFR218_protein; tetratr 98.5 2.4E-07 8.3E-12 72.9 6.9 66 293-384 3-69 (99)
110 4ga2_A E3 SUMO-protein ligase 98.5 9.3E-08 3.2E-12 82.3 4.3 91 296-406 3-116 (150)
111 2v5f_A Prolyl 4-hydroxylase su 98.4 1.4E-06 4.9E-11 70.0 10.4 86 293-402 8-93 (104)
112 2h6f_A Protein farnesyltransfe 98.4 1.2E-06 4.1E-11 87.7 12.0 63 292-369 99-162 (382)
113 3ieg_A DNAJ homolog subfamily 98.4 2.4E-06 8E-11 82.6 13.6 101 290-406 234-357 (359)
114 4gco_A Protein STI-1; structur 98.4 1.1E-06 3.6E-11 73.3 9.5 64 291-369 48-111 (126)
115 3ma5_A Tetratricopeptide repea 98.4 1.1E-06 3.7E-11 69.9 8.7 64 291-369 8-71 (100)
116 1na0_A Designed protein CTPR3; 98.4 5.3E-06 1.8E-10 66.8 12.9 90 290-399 9-121 (125)
117 2h6f_A Protein farnesyltransfe 98.4 2.4E-06 8.2E-11 85.5 12.7 91 291-401 132-246 (382)
118 1na3_A Designed protein CTPR2; 98.3 5.3E-06 1.8E-10 63.5 11.5 79 290-399 9-87 (91)
119 2pl2_A Hypothetical conserved 98.3 4E-06 1.4E-10 76.5 12.5 62 293-369 8-69 (217)
120 2hr2_A Hypothetical protein; a 98.3 1.9E-06 6.6E-11 74.7 9.6 65 290-369 57-132 (159)
121 3gyz_A Chaperone protein IPGC; 98.3 2E-06 7E-11 74.2 8.2 62 291-367 71-132 (151)
122 2pl2_A Hypothetical conserved 98.2 1.2E-05 4E-10 73.4 13.3 105 292-418 41-179 (217)
123 2e2e_A Formate-dependent nitri 98.2 1.4E-05 4.8E-10 69.8 13.1 88 291-398 45-158 (177)
124 1t11_A Trigger factor, TF; hel 98.2 4.4E-07 1.5E-11 90.8 3.6 78 186-275 168-246 (392)
125 3k9i_A BH0479 protein; putativ 98.2 6.4E-06 2.2E-10 67.1 9.8 69 290-384 27-95 (117)
126 1zu2_A Mitochondrial import re 98.2 1E-05 3.5E-10 70.0 10.9 90 290-403 36-139 (158)
127 2gw1_A Mitochondrial precursor 98.2 1E-05 3.4E-10 82.7 12.9 83 286-384 2-107 (514)
128 4i17_A Hypothetical protein; T 98.2 1.5E-05 5E-10 72.7 12.6 92 293-404 45-168 (228)
129 3uq3_A Heat shock protein STI1 98.2 6.8E-06 2.3E-10 75.5 10.4 65 290-369 139-203 (258)
130 2c2l_A CHIP, carboxy terminus 98.2 4.5E-06 1.5E-10 79.6 8.9 63 292-369 40-102 (281)
131 4g1t_A Interferon-induced prot 98.1 1.4E-05 4.9E-10 81.0 12.4 98 292-400 53-183 (472)
132 1xnf_A Lipoprotein NLPI; TPR, 98.1 4.3E-05 1.5E-09 71.0 14.6 81 289-384 42-145 (275)
133 4gcn_A Protein STI-1; structur 98.1 1.7E-05 5.8E-10 65.9 10.4 69 291-367 43-111 (127)
134 2r5s_A Uncharacterized protein 98.1 8.5E-06 2.9E-10 71.5 8.9 107 291-418 7-136 (176)
135 3fp2_A TPR repeat-containing p 98.1 1E-05 3.5E-10 83.3 10.8 78 277-369 12-89 (537)
136 3qou_A Protein YBBN; thioredox 98.1 2.1E-05 7.2E-10 75.1 12.2 108 291-419 118-248 (287)
137 3qky_A Outer membrane assembly 98.1 6.1E-05 2.1E-09 70.2 14.9 83 290-384 15-131 (261)
138 3u4t_A TPR repeat-containing p 98.1 1.9E-05 6.6E-10 73.5 11.0 53 339-396 74-149 (272)
139 2vsy_A XCC0866; transferase, g 98.1 2.2E-05 7.6E-10 82.3 12.7 108 291-419 24-157 (568)
140 1hh8_A P67PHOX, NCF-2, neutrop 98.1 2.8E-05 9.5E-10 69.8 11.7 62 291-367 38-99 (213)
141 4abn_A Tetratricopeptide repea 98.0 4E-05 1.4E-09 78.8 13.8 93 290-402 102-226 (474)
142 2yhc_A BAMD, UPF0169 lipoprote 98.0 8.7E-05 3E-09 67.8 14.8 67 291-369 5-71 (225)
143 3upv_A Heat shock protein STI1 98.0 1.4E-05 4.9E-10 65.6 8.5 64 291-369 39-102 (126)
144 3rkv_A Putative peptidylprolyl 98.0 1.4E-05 4.7E-10 69.0 8.8 66 289-369 62-127 (162)
145 2kck_A TPR repeat; tetratricop 98.0 1.5E-05 5.2E-10 62.9 8.3 81 291-402 7-89 (112)
146 1hh8_A P67PHOX, NCF-2, neutrop 98.0 1.9E-05 6.3E-10 70.9 9.7 78 289-384 5-105 (213)
147 3vtx_A MAMA; tetratricopeptide 98.0 7.1E-05 2.4E-09 65.5 13.3 107 291-418 40-169 (184)
148 2pzi_A Probable serine/threoni 98.0 1.7E-05 5.9E-10 85.4 10.9 96 292-407 435-552 (681)
149 3ieg_A DNAJ homolog subfamily 98.0 4.7E-05 1.6E-09 73.3 12.9 87 290-396 3-115 (359)
150 2xcb_A PCRH, regulatory protei 98.0 2.5E-05 8.5E-10 65.9 9.6 63 292-369 54-116 (142)
151 2kat_A Uncharacterized protein 98.0 4.1E-05 1.4E-09 61.8 10.0 62 292-368 21-82 (115)
152 2fo7_A Synthetic consensus TPR 98.0 9.3E-05 3.2E-09 59.9 12.3 90 293-402 4-116 (136)
153 3uq3_A Heat shock protein STI1 98.0 7.5E-05 2.6E-09 68.4 12.9 109 289-403 4-153 (258)
154 2vgx_A Chaperone SYCD; alterna 98.0 1.9E-05 6.6E-10 67.5 8.0 63 292-369 57-119 (148)
155 3sz7_A HSC70 cochaperone (SGT) 98.0 2.2E-05 7.7E-10 67.7 8.5 64 291-369 46-109 (164)
156 3as5_A MAMA; tetratricopeptide 97.9 0.00013 4.5E-09 62.8 13.5 94 292-405 44-160 (186)
157 4abn_A Tetratricopeptide repea 97.9 3.9E-05 1.3E-09 78.9 11.2 98 291-408 171-311 (474)
158 2q7f_A YRRB protein; TPR, prot 97.9 0.00011 3.7E-09 66.8 12.8 88 295-402 96-206 (243)
159 3mkr_A Coatomer subunit epsilo 97.9 9.1E-05 3.1E-09 70.9 12.6 67 303-384 179-269 (291)
160 3qky_A Outer membrane assembly 97.9 0.00019 6.5E-09 66.8 14.5 78 292-369 91-178 (261)
161 1fch_A Peroxisomal targeting s 97.9 4.3E-05 1.5E-09 74.4 10.4 78 291-383 218-318 (368)
162 3as5_A MAMA; tetratricopeptide 97.9 7.3E-05 2.5E-09 64.5 10.6 96 289-404 7-125 (186)
163 1qqe_A Vesicular transport pro 97.9 5.5E-05 1.9E-09 72.2 10.7 71 290-369 117-188 (292)
164 4eqf_A PEX5-related protein; a 97.9 6.6E-05 2.3E-09 73.3 11.5 77 292-383 215-314 (365)
165 2ifu_A Gamma-SNAP; membrane fu 97.9 7.8E-05 2.7E-09 71.7 11.7 85 289-384 115-228 (307)
166 1hxi_A PEX5, peroxisome target 97.9 3.4E-05 1.2E-09 63.5 7.8 63 291-368 52-114 (121)
167 2q7f_A YRRB protein; TPR, prot 97.9 0.00017 5.8E-09 65.5 13.4 94 291-404 58-174 (243)
168 4eqf_A PEX5-related protein; a 97.9 0.00015 5E-09 70.8 13.8 91 293-403 102-227 (365)
169 3n71_A Histone lysine methyltr 97.9 0.00012 4.3E-09 75.4 13.6 79 284-369 303-381 (490)
170 1w3b_A UDP-N-acetylglucosamine 97.9 6.6E-05 2.3E-09 74.1 11.0 63 292-369 69-131 (388)
171 3u4t_A TPR repeat-containing p 97.8 6.6E-05 2.3E-09 69.8 10.2 90 293-402 77-189 (272)
172 1qqe_A Vesicular transport pro 97.8 0.00017 5.9E-09 68.7 13.1 87 289-384 76-192 (292)
173 2ho1_A Type 4 fimbrial biogene 97.8 0.0002 6.9E-09 65.7 12.8 89 294-402 75-188 (252)
174 3u3w_A Transcriptional activat 97.8 9.7E-05 3.3E-09 70.4 10.7 72 290-369 155-226 (293)
175 2pzi_A Probable serine/threoni 97.8 9.9E-06 3.4E-10 87.3 4.1 87 292-399 469-578 (681)
176 1fch_A Peroxisomal targeting s 97.8 0.00011 3.8E-09 71.5 11.3 80 290-384 64-166 (368)
177 3q49_B STIP1 homology and U bo 97.8 7.2E-05 2.5E-09 61.8 8.5 64 291-369 44-107 (137)
178 1w3b_A UDP-N-acetylglucosamine 97.8 0.00018 6.2E-09 70.9 12.7 60 295-369 140-199 (388)
179 2vq2_A PILW, putative fimbrial 97.8 0.00033 1.1E-08 62.5 13.4 91 293-403 45-161 (225)
180 3gty_X Trigger factor, TF; cha 97.8 5.2E-05 1.8E-09 76.8 8.7 86 66-174 154-241 (433)
181 3hym_B Cell division cycle pro 97.8 8.7E-05 3E-09 70.7 9.9 96 292-398 195-313 (330)
182 3k9i_A BH0479 protein; putativ 97.7 4.5E-05 1.5E-09 61.9 6.1 88 302-418 2-89 (117)
183 2e2e_A Formate-dependent nitri 97.7 2E-05 6.8E-10 68.8 4.2 107 291-418 11-143 (177)
184 2ho1_A Type 4 fimbrial biogene 97.7 0.00025 8.4E-09 65.0 11.9 108 292-418 107-237 (252)
185 2fo7_A Synthetic consensus TPR 97.7 0.00022 7.4E-09 57.7 10.3 62 293-369 38-99 (136)
186 1pc2_A Mitochondria fission pr 97.7 0.00016 5.4E-09 61.9 9.5 83 292-403 34-119 (152)
187 1a17_A Serine/threonine protei 97.7 0.00021 7.2E-09 60.7 10.4 63 292-369 49-111 (166)
188 3ro3_A PINS homolog, G-protein 97.7 0.00035 1.2E-08 58.5 11.6 74 287-369 6-79 (164)
189 3ulq_A Response regulator aspa 97.7 0.0003 1E-08 69.4 12.7 74 288-369 141-214 (383)
190 2y4t_A DNAJ homolog subfamily 97.7 0.00014 4.8E-09 72.9 10.4 81 289-384 25-128 (450)
191 3hym_B Cell division cycle pro 97.7 0.0003 1E-08 66.9 12.2 102 295-417 164-297 (330)
192 3cv0_A Peroxisome targeting si 97.7 0.0002 6.8E-09 68.0 10.8 77 291-382 173-272 (327)
193 2fbn_A 70 kDa peptidylprolyl i 97.7 0.00014 4.9E-09 64.7 9.1 65 290-369 88-152 (198)
194 2kat_A Uncharacterized protein 97.7 0.00025 8.5E-09 57.0 9.7 47 308-369 3-49 (115)
195 2dba_A Smooth muscle cell asso 97.7 0.00021 7E-09 59.5 9.4 65 290-369 65-129 (148)
196 2lni_A Stress-induced-phosphop 97.6 0.00015 5E-09 59.1 8.3 63 292-369 52-114 (133)
197 1zu2_A Mitochondrial import re 97.6 0.00031 1.1E-08 60.6 10.5 78 302-403 14-94 (158)
198 3edt_B KLC 2, kinesin light ch 97.6 0.00031 1.1E-08 64.9 11.1 73 289-368 42-114 (283)
199 3ro3_A PINS homolog, G-protein 97.6 0.00034 1.2E-08 58.5 10.4 71 290-369 49-119 (164)
200 1elw_A TPR1-domain of HOP; HOP 97.6 0.00021 7.3E-09 56.5 8.6 63 292-369 40-102 (118)
201 2vq2_A PILW, putative fimbrial 97.6 0.00028 9.6E-09 63.0 10.3 93 292-402 78-195 (225)
202 1ihg_A Cyclophilin 40; ppiase 97.6 0.00022 7.4E-09 70.9 10.2 64 291-369 274-337 (370)
203 3q15_A PSP28, response regulat 97.6 0.00035 1.2E-08 68.9 11.6 74 287-368 138-211 (378)
204 2kck_A TPR repeat; tetratricop 97.6 0.00014 4.7E-09 57.2 7.0 61 292-367 42-105 (112)
205 1xnf_A Lipoprotein NLPI; TPR, 97.6 0.00049 1.7E-08 63.7 11.8 78 292-384 79-178 (275)
206 3u3w_A Transcriptional activat 97.6 0.00033 1.1E-08 66.6 10.7 125 290-423 115-270 (293)
207 2xev_A YBGF; tetratricopeptide 97.6 0.00026 8.7E-09 57.7 8.7 66 292-369 41-106 (129)
208 4a1s_A PINS, partner of inscut 97.6 0.00068 2.3E-08 67.0 13.3 71 287-368 45-115 (411)
209 2qfc_A PLCR protein; TPR, HTH, 97.5 0.0011 3.8E-08 62.8 14.1 73 289-369 154-226 (293)
210 2yhc_A BAMD, UPF0169 lipoprote 97.5 0.00061 2.1E-08 62.0 11.7 66 292-369 43-126 (225)
211 3fp2_A TPR repeat-containing p 97.5 0.0005 1.7E-08 70.4 11.9 126 286-417 239-405 (537)
212 3ro2_A PINS homolog, G-protein 97.5 0.0013 4.5E-08 62.0 13.9 68 290-368 5-72 (338)
213 2vyi_A SGTA protein; chaperone 97.5 0.00041 1.4E-08 55.9 8.9 63 292-369 48-110 (131)
214 3cv0_A Peroxisome targeting si 97.5 0.00037 1.3E-08 66.1 9.8 80 290-384 21-123 (327)
215 3q15_A PSP28, response regulat 97.5 0.0012 4E-08 65.1 13.3 72 288-368 180-251 (378)
216 2vsy_A XCC0866; transferase, g 97.4 0.00052 1.8E-08 71.8 11.1 78 292-384 59-162 (568)
217 3sf4_A G-protein-signaling mod 97.4 0.0012 4.1E-08 64.6 13.0 68 290-368 9-76 (406)
218 3gw4_A Uncharacterized protein 97.4 0.0016 5.3E-08 57.3 12.5 71 289-368 25-95 (203)
219 4g1t_A Interferon-induced prot 97.4 0.00024 8.3E-09 71.8 8.0 93 292-396 96-216 (472)
220 1elr_A TPR2A-domain of HOP; HO 97.4 0.00067 2.3E-08 54.6 9.1 70 292-369 40-109 (131)
221 3qwp_A SET and MYND domain-con 97.4 0.0018 6E-08 65.6 13.8 76 287-369 284-359 (429)
222 2gw1_A Mitochondrial precursor 97.4 0.00047 1.6E-08 70.1 9.7 92 294-399 376-493 (514)
223 2ifu_A Gamma-SNAP; membrane fu 97.4 0.00064 2.2E-08 65.2 10.2 68 292-368 38-105 (307)
224 1wao_1 Serine/threonine protei 97.4 0.00023 8E-09 73.1 7.4 65 290-369 40-104 (477)
225 3mkr_A Coatomer subunit epsilo 97.4 0.0011 3.8E-08 63.2 11.6 103 293-417 133-262 (291)
226 1na0_A Designed protein CTPR3; 97.4 0.00079 2.7E-08 53.6 8.9 63 292-369 45-107 (125)
227 4a1s_A PINS, partner of inscut 97.3 0.00066 2.3E-08 67.1 10.0 70 291-369 224-293 (411)
228 2xpi_A Anaphase-promoting comp 97.3 0.0017 5.9E-08 67.5 13.4 106 292-418 375-503 (597)
229 3qww_A SET and MYND domain-con 97.3 0.0018 6.2E-08 65.5 12.3 76 286-368 294-369 (433)
230 3ulq_A Response regulator aspa 97.3 0.0038 1.3E-07 61.3 14.3 72 288-368 182-253 (383)
231 3sf4_A G-protein-signaling mod 97.2 0.0021 7.1E-08 62.9 12.1 71 290-369 187-257 (406)
232 2xpi_A Anaphase-promoting comp 97.2 0.0023 8E-08 66.5 13.1 122 292-419 409-579 (597)
233 3n71_A Histone lysine methyltr 97.2 0.0022 7.5E-08 66.0 12.5 113 288-416 349-461 (490)
234 2qfc_A PLCR protein; TPR, HTH, 97.2 0.0024 8.2E-08 60.5 11.7 67 293-368 118-184 (293)
235 3nf1_A KLC 1, kinesin light ch 97.2 0.0017 5.8E-08 60.9 10.3 72 290-368 69-140 (311)
236 3ro2_A PINS homolog, G-protein 97.2 0.0019 6.5E-08 60.9 10.5 71 290-369 183-253 (338)
237 3qww_A SET and MYND domain-con 97.2 0.00085 2.9E-08 68.0 8.4 83 289-384 339-421 (433)
238 3edt_B KLC 2, kinesin light ch 97.2 0.0024 8.3E-08 58.7 11.0 73 289-368 84-156 (283)
239 2ond_A Cleavage stimulation fa 97.1 0.0019 6.6E-08 61.7 10.3 89 294-401 103-215 (308)
240 3nf1_A KLC 1, kinesin light ch 97.1 0.0024 8.2E-08 59.9 10.3 73 290-369 153-225 (311)
241 3gw4_A Uncharacterized protein 97.0 0.0065 2.2E-07 53.1 12.1 73 289-369 65-137 (203)
242 2ond_A Cleavage stimulation fa 97.0 0.008 2.7E-07 57.3 13.6 68 302-384 69-168 (308)
243 3qou_A Protein YBBN; thioredox 96.9 0.0025 8.5E-08 60.5 8.5 99 292-406 153-272 (287)
244 3qwp_A SET and MYND domain-con 96.8 0.0021 7.3E-08 65.0 8.1 84 288-384 327-410 (429)
245 1ouv_A Conserved hypothetical 96.7 0.01 3.5E-07 55.0 11.3 31 339-369 74-108 (273)
246 1dce_A Protein (RAB geranylger 96.7 0.01 3.5E-07 62.2 12.3 90 293-402 66-191 (567)
247 3bee_A Putative YFRE protein; 96.7 0.0075 2.6E-07 46.9 8.3 61 291-366 7-70 (93)
248 1nzn_A CGI-135 protein, fissio 96.7 0.0039 1.3E-07 51.4 6.8 51 338-404 73-123 (126)
249 3o48_A Mitochondria fission 1 96.6 0.01 3.4E-07 49.1 8.9 51 338-404 77-127 (134)
250 1y8m_A FIS1; mitochondria, unk 96.5 0.014 4.7E-07 48.9 9.4 49 339-403 77-125 (144)
251 1dce_A Protein (RAB geranylger 96.5 0.012 4.1E-07 61.7 11.4 100 284-403 22-157 (567)
252 3ma5_A Tetratricopeptide repea 96.5 0.0043 1.5E-07 48.5 6.1 31 339-369 7-37 (100)
253 2r5s_A Uncharacterized protein 96.5 0.0091 3.1E-07 51.7 8.7 99 291-405 41-160 (176)
254 1ouv_A Conserved hypothetical 96.5 0.0087 3E-07 55.5 9.1 30 340-369 183-216 (273)
255 3ffl_A Anaphase-promoting comp 96.4 0.011 3.6E-07 51.0 8.0 75 290-364 63-147 (167)
256 3rjv_A Putative SEL1 repeat pr 96.2 0.01 3.4E-07 53.4 7.6 62 290-369 18-83 (212)
257 3dra_A Protein farnesyltransfe 96.2 0.037 1.3E-06 53.1 11.7 54 301-369 43-99 (306)
258 2kc7_A BFR218_protein; tetratr 96.1 0.022 7.6E-07 43.6 8.1 46 342-403 3-49 (99)
259 4f3v_A ESX-1 secretion system 96.1 0.024 8.1E-07 53.7 9.5 62 292-366 137-198 (282)
260 1hz4_A MALT regulatory protein 95.9 0.098 3.3E-06 50.6 13.7 70 290-368 53-122 (373)
261 3dss_A Geranylgeranyl transfer 95.9 0.053 1.8E-06 52.6 11.3 27 297-323 36-63 (331)
262 3q7a_A Farnesyltransferase alp 95.9 0.091 3.1E-06 51.3 12.9 98 301-418 65-195 (349)
263 4b4t_Q 26S proteasome regulato 95.8 0.025 8.7E-07 56.0 9.3 77 293-369 7-85 (434)
264 3dra_A Protein farnesyltransfe 95.8 0.059 2E-06 51.7 11.1 62 293-369 70-140 (306)
265 2xm6_A Protein corresponding t 95.8 0.04 1.4E-06 56.1 10.5 81 339-427 363-475 (490)
266 1xi4_A Clathrin heavy chain; a 95.7 0.034 1.2E-06 63.3 10.0 54 292-368 1197-1250(1630)
267 2ooe_A Cleavage stimulation fa 95.7 0.083 2.9E-06 54.3 12.7 61 294-369 276-351 (530)
268 3dss_A Geranylgeranyl transfer 95.6 0.13 4.5E-06 49.7 13.1 77 306-402 90-192 (331)
269 2ooe_A Cleavage stimulation fa 95.4 0.039 1.3E-06 56.8 9.1 88 294-400 325-436 (530)
270 1b89_A Protein (clathrin heavy 95.3 0.014 4.7E-07 58.8 5.0 54 292-368 124-177 (449)
271 2l6j_A TPR repeat-containing p 95.3 0.013 4.5E-07 45.6 3.9 63 292-363 40-102 (111)
272 1klx_A Cysteine rich protein B 95.1 0.08 2.7E-06 43.9 8.4 61 292-369 59-127 (138)
273 1hz4_A MALT regulatory protein 95.1 0.056 1.9E-06 52.4 8.5 70 293-369 96-165 (373)
274 3rjv_A Putative SEL1 repeat pr 95.0 0.094 3.2E-06 46.8 9.0 58 293-368 53-118 (212)
275 3q7a_A Farnesyltransferase alp 94.9 0.15 5E-06 49.8 10.7 86 294-399 92-211 (349)
276 1na3_A Designed protein CTPR2; 94.8 0.061 2.1E-06 39.9 6.4 47 292-353 45-91 (91)
277 1klx_A Cysteine rich protein B 94.7 0.1 3.6E-06 43.2 8.1 57 296-369 31-91 (138)
278 4b4t_Q 26S proteasome regulato 94.7 0.11 3.7E-06 51.3 9.6 71 290-369 135-205 (434)
279 3ffl_A Anaphase-promoting comp 94.3 0.18 6.2E-06 43.3 8.5 70 293-369 23-93 (167)
280 2ff4_A Probable regulatory pro 93.9 0.85 2.9E-05 45.0 14.1 125 290-419 115-257 (388)
281 4f3v_A ESX-1 secretion system 93.6 0.12 4.1E-06 48.8 6.7 64 292-367 173-236 (282)
282 3gty_X Trigger factor, TF; cha 93.5 0.11 3.7E-06 52.4 6.7 62 189-274 166-227 (433)
283 1b89_A Protein (clathrin heavy 93.1 0.28 9.6E-06 49.3 8.9 79 282-369 140-237 (449)
284 2v6y_A AAA family ATPase, P60 93.0 0.18 6.2E-06 38.1 5.6 41 281-321 1-42 (83)
285 4gns_B Protein CSD3, chitin bi 92.1 0.27 9.4E-06 52.8 7.7 58 293-365 340-397 (754)
286 3mv2_B Coatomer subunit epsilo 92.0 0.58 2E-05 44.7 9.1 53 300-368 186-240 (310)
287 2cpt_A SKD1 protein, vacuolar 91.4 0.3 1E-05 39.5 5.5 43 279-321 6-49 (117)
288 3mv2_A Coatomer subunit alpha; 91.2 0.87 3E-05 43.3 9.3 60 293-352 117-176 (325)
289 2xm6_A Protein corresponding t 91.2 0.45 1.5E-05 48.1 8.0 59 294-369 367-433 (490)
290 3mkr_B Coatomer subunit alpha; 91.0 1.6 5.4E-05 41.6 10.9 61 293-353 105-165 (320)
291 3ly7_A Transcriptional activat 91.0 2.4 8.2E-05 41.4 12.5 91 294-384 200-344 (372)
292 3e4b_A ALGK; tetratricopeptide 90.4 1.1 3.6E-05 45.1 9.9 31 339-369 318-352 (452)
293 2w2u_A Hypothetical P60 katani 90.4 0.53 1.8E-05 35.5 5.6 42 280-321 8-50 (83)
294 2v6x_A Vacuolar protein sortin 90.2 0.37 1.3E-05 36.5 4.8 41 281-321 4-44 (85)
295 1xi4_A Clathrin heavy chain; a 89.7 0.37 1.2E-05 55.1 6.0 58 292-369 1107-1164(1630)
296 3u64_A Protein TP_0956; tetrat 89.1 1.8 6.1E-05 40.8 9.4 65 306-383 179-273 (301)
297 1wfd_A Hypothetical protein 15 89.1 0.83 2.8E-05 35.2 6.0 37 285-321 10-46 (93)
298 4a5x_A MITD1, MIT domain-conta 88.8 0.86 2.9E-05 34.6 5.8 34 288-321 14-47 (86)
299 3e4b_A ALGK; tetratricopeptide 87.1 1.4 4.8E-05 44.2 8.0 27 339-366 283-314 (452)
300 2w2u_A Hypothetical P60 katani 87.0 5.1 0.00018 30.0 9.1 55 342-409 22-76 (83)
301 2v6y_A AAA family ATPase, P60 86.7 5.5 0.00019 29.7 9.2 57 342-411 14-70 (83)
302 3mv2_B Coatomer subunit epsilo 86.7 3.3 0.00011 39.4 9.9 62 294-368 104-165 (310)
303 2v5f_A Prolyl 4-hydroxylase su 86.5 1.2 4.1E-05 34.5 5.7 33 291-323 47-79 (104)
304 3ly7_A Transcriptional activat 86.1 2.2 7.6E-05 41.6 8.4 58 296-369 283-340 (372)
305 3mkq_A Coatomer beta'-subunit; 85.4 2.2 7.7E-05 45.6 9.1 90 292-383 683-779 (814)
306 2crb_A Nuclear receptor bindin 84.6 9.9 0.00034 28.8 9.4 38 339-380 15-52 (97)
307 4a5x_A MITD1, MIT domain-conta 84.5 9.7 0.00033 28.6 9.7 60 339-411 16-75 (86)
308 2crb_A Nuclear receptor bindin 83.1 1.8 6.1E-05 32.9 4.8 36 286-321 11-46 (97)
309 1wfd_A Hypothetical protein 15 82.9 9.2 0.00032 29.2 9.1 58 342-412 18-75 (93)
310 2cpt_A SKD1 protein, vacuolar 82.4 12 0.00041 29.9 9.9 59 342-412 21-79 (117)
311 3bee_A Putative YFRE protein; 77.9 9.2 0.00032 28.9 7.7 46 339-384 6-77 (93)
312 3txn_A 26S proteasome regulato 77.8 8.1 0.00028 38.0 9.1 65 295-368 104-168 (394)
313 2dl1_A Spartin; SPG20, MIT, st 77.4 3.3 0.00011 33.0 4.8 71 286-356 18-95 (116)
314 2v6x_A Vacuolar protein sortin 77.1 19 0.00065 26.7 9.1 57 343-412 17-73 (85)
315 4b4t_R RPN7, 26S proteasome re 76.0 4.3 0.00015 40.4 6.7 65 292-368 133-197 (429)
316 4e6h_A MRNA 3'-END-processing 73.5 12 0.00041 39.7 9.6 57 295-366 348-405 (679)
317 3u64_A Protein TP_0956; tetrat 73.5 4 0.00014 38.5 5.2 64 292-369 201-270 (301)
318 2vkj_A TM1634; membrane protei 72.0 21 0.00072 26.8 7.7 33 288-320 51-83 (106)
319 3kae_A CDC27, possible protein 71.6 15 0.00051 31.6 7.7 42 342-384 65-113 (242)
320 2ff4_A Probable regulatory pro 63.4 40 0.0014 32.7 10.5 61 292-367 173-233 (388)
321 2ymb_A MITD1, MIT domain-conta 62.4 1.6 5.5E-05 40.2 0.0 65 284-348 17-82 (257)
322 3ax2_A Mitochondrial import re 57.3 16 0.00054 26.5 4.6 38 285-322 12-49 (73)
323 4e6h_A MRNA 3'-END-processing 55.8 70 0.0024 33.7 11.4 23 346-368 511-533 (679)
324 1zbp_A Hypothetical protein VP 55.7 49 0.0017 30.5 8.8 58 297-369 4-61 (273)
325 2wb7_A PT26-6P; extra chromoso 54.6 21 0.00073 35.7 6.5 40 284-324 423-466 (526)
326 3lpz_A GET4 (YOR164C homolog); 50.5 1.2E+02 0.0042 28.8 11.0 25 343-367 59-83 (336)
327 3eab_A Spastin; spastin, MIT, 49.8 65 0.0022 24.2 7.0 66 288-353 14-86 (89)
328 1om2_A Protein (mitochondrial 49.8 30 0.001 26.4 5.3 40 283-322 13-52 (95)
329 1ya0_A SMG-7 transcript varian 46.9 66 0.0023 32.5 9.0 63 292-369 154-216 (497)
330 4g26_A Pentatricopeptide repea 43.7 1E+02 0.0035 31.0 10.0 61 295-369 110-170 (501)
331 3mkq_B Coatomer subunit alpha; 43.7 36 0.0012 29.2 5.6 76 290-365 34-115 (177)
332 2npm_A 14-3-3 domain containin 42.9 58 0.002 29.8 7.1 54 306-367 172-226 (260)
333 1pc2_A Mitochondria fission pr 41.1 32 0.0011 28.7 4.7 35 289-323 70-104 (152)
334 2br9_A 14-3-3E, 14-3-3 protein 39.0 47 0.0016 29.9 5.8 54 306-367 146-201 (234)
335 3mkq_A Coatomer beta'-subunit; 38.7 78 0.0027 33.3 8.6 31 339-369 681-711 (814)
336 2rpa_A Katanin P60 ATPase-cont 37.7 1.2E+02 0.004 22.2 8.2 26 342-367 15-40 (78)
337 2zan_A Vacuolar protein sortin 35.9 7.7 0.00026 38.8 0.0 39 284-322 5-43 (444)
338 1o9d_A 14-3-3-like protein C; 34.9 58 0.002 29.8 5.8 53 307-367 152-206 (260)
339 3uzd_A 14-3-3 protein gamma; s 34.1 62 0.0021 29.4 5.8 53 306-366 147-201 (248)
340 3ubw_A 14-3-3E, 14-3-3 protein 32.9 67 0.0023 29.4 5.8 53 306-366 172-226 (261)
341 2oo2_A Hypothetical protein AF 31.5 85 0.0029 23.4 5.1 39 283-321 28-66 (86)
342 3myv_A SUSD superfamily protei 31.1 62 0.0021 32.1 5.9 28 340-367 191-218 (454)
343 2rpa_A Katanin P60 ATPase-cont 30.9 37 0.0013 24.9 3.0 38 280-321 6-43 (78)
344 4b4t_P 26S proteasome regulato 30.8 3.9E+02 0.013 26.1 12.6 72 290-369 177-248 (445)
345 3iqu_A 14-3-3 protein sigma; s 30.6 70 0.0024 28.8 5.5 53 306-366 149-203 (236)
346 2pmr_A Uncharacterized protein 30.5 91 0.0031 23.3 5.2 38 284-321 33-70 (87)
347 1nzn_A CGI-135 protein, fissio 29.7 1.4E+02 0.0048 23.9 6.6 33 291-323 75-107 (126)
348 2ijq_A Hypothetical protein; s 29.7 1.5E+02 0.0052 24.9 7.1 67 294-367 36-103 (161)
349 3c3r_A Programmed cell death 6 29.3 3.9E+02 0.013 25.6 12.0 94 306-409 238-336 (380)
350 3kez_A Putative sugar binding 28.9 72 0.0025 31.7 5.9 28 340-367 197-224 (461)
351 2wpv_A GET4, UPF0363 protein Y 28.8 3.6E+02 0.012 25.1 10.7 64 296-368 19-82 (312)
352 3r9m_A BRO1 domain-containing 28.8 3.5E+02 0.012 25.9 10.7 64 306-369 215-283 (376)
353 2yin_A DOCK2, dedicator of cyt 27.9 1.9E+02 0.0066 28.5 8.7 75 294-368 39-121 (436)
354 3efz_A 14-3-3 protein; 14-3-3, 27.8 70 0.0024 29.4 5.0 57 306-367 168-225 (268)
355 3mcx_A SUSD superfamily protei 27.5 71 0.0024 31.9 5.6 29 340-368 203-231 (477)
356 3jys_A SUSD superfamily protei 26.6 83 0.0028 31.7 5.9 34 333-367 189-222 (499)
357 2o8p_A 14-3-3 domain containin 26.2 48 0.0017 29.7 3.5 59 302-367 137-196 (227)
358 2dl1_A Spartin; SPG20, MIT, st 26.1 2.4E+02 0.0083 22.2 11.0 37 342-382 25-61 (116)
359 4h7y_A Dual specificity protei 26.0 1.6E+02 0.0056 24.6 6.4 51 304-369 74-124 (161)
360 2jpu_A ORF C02003 protein; sol 25.4 47 0.0016 26.9 3.0 32 288-319 5-36 (129)
361 1t98_A KICB protein, chromosom 24.9 3.4E+02 0.012 24.3 8.5 32 329-369 180-211 (287)
362 2uy1_A Cleavage stimulation fa 23.9 2.2E+02 0.0075 28.3 8.5 109 281-418 1-117 (493)
363 3htx_A HEN1; HEN1, small RNA m 23.6 2.2E+02 0.0075 31.0 8.5 60 65-124 559-650 (950)
364 4b4t_P 26S proteasome regulato 22.5 5.5E+02 0.019 25.0 14.1 66 292-366 139-204 (445)
365 2f23_A Anti-cleavage anti-GREA 21.9 1.1E+02 0.0038 25.4 4.8 66 56-125 73-144 (156)
366 3o10_A Sacsin; all-helical dom 21.8 2.4E+02 0.0081 22.8 6.8 49 346-399 23-72 (141)
367 4gq2_M Nucleoporin NUP120; bet 21.1 1.7E+02 0.0057 32.2 7.4 74 294-367 844-925 (950)
368 3lew_A SUSD-like carbohydrate 21.1 2.1E+02 0.0072 28.5 7.7 29 340-368 204-232 (495)
369 3rfw_A Cell-binding factor 2; 21.0 95 0.0032 27.8 4.6 21 215-235 170-190 (252)
370 2xze_A STAM-binding protein; h 20.6 1.5E+02 0.0053 24.3 5.4 40 281-320 31-70 (146)
371 2lj4_A Peptidyl-prolyl CIS-tra 20.0 33 0.0011 27.1 1.0 30 215-245 79-108 (115)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.8e-52 Score=432.47 Aligned_cols=362 Identities=34% Similarity=0.602 Sum_probs=304.3
Q ss_pred cccc--cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcE
Q 036950 45 KDIC--KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEK 118 (469)
Q Consensus 45 ~dv~--~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~ 118 (469)
.|++ +++|+.++++.+|+|...|..||.|+|||++++.||++|++| .|+.|.+|.+++++||+++|.+|++|++
T Consensus 23 ~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~ 102 (457)
T 1kt0_A 23 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEI 102 (457)
T ss_dssp ----------CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCE
T ss_pred ccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCE
Confidence 4555 789999999999999555999999999999998899999987 6899999999999999999999999999
Q ss_pred EEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccccccchhhhhhhhhcCCCCCCCc-----eEE-EEEe
Q 036950 119 VLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSDITKDKKVLKKILKEGDGYENQM-----MVQ-WFKL 192 (469)
Q Consensus 119 ~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~dv~~d~~l~k~il~~G~g~~~p~-----~V~-~~~l 192 (469)
+.|.|||+++||..+.+ +.||++++++|+|+|++|.. .++..+++++++++++|.|...|. +|+ .|++
T Consensus 103 ~~~~i~~~~~yg~~g~~-----~~i~~~~~l~~~v~l~~~~~-~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~ 176 (457)
T 1kt0_A 103 CHLLCKPEYAYGSAGSL-----PKIPSNATLFFEIELLDFKG-EDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC 176 (457)
T ss_dssp EEEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE
T ss_pred EEEEEChHHhccccCCC-----CCCCCCCcEEEEEeeceeec-ccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe
Confidence 99999999999988764 56999999999999999977 467788899999999999987777 455 8888
Q ss_pred cCCcEEEecCCCCCCcEEEEcCCC---ccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEE
Q 036950 193 HDGTVFVKKGHDEEPLFEFKIDEE---QVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVEL 269 (469)
Q Consensus 193 ~~g~~~d~~~~~~~~p~~~~lG~~---~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel 269 (469)
+|++||++ +++|.+|+| .+++||+.||..|++||++.|.++|.++|+..|... ..||+++.+.|.+.+
T Consensus 177 -~g~~f~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~--~~ip~~~~l~y~~~l 247 (457)
T 1kt0_A 177 -GGRMFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPK--FGIEPNAELIYEVTL 247 (457)
T ss_dssp -TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGG--GTBCTTCCEEEEEEE
T ss_pred -CCeEEecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcc--cCCCCCCEEEEEhhh
Confidence 89999974 699999977 589999999999999999999999999999988763 469999999999999
Q ss_pred eeeeecccccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHH
Q 036950 270 VSFIKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACK 349 (469)
Q Consensus 270 ~~~~~~~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~ 349 (469)
.++.+....|.+..+++...+..+++.|+.+|+.|+|.+|+..|++|+.+.+....+.+++..+...+...+|+|+|.||
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~ 327 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCY 327 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998887888888889999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 036950 350 LKLKEYKQAEKLCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 350 ~kl~~~~~ai~~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
+++++|++|+.+|++||+++ +.+|++|++++|++. .+...+..+..++.++.
T Consensus 328 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~-----~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 328 LKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK-----AARLQISMCQKKAKEHN 402 (457)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---------CHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 778999999999999 99999999999999999
Q ss_pred HHHHHHHHHhhhhhhhchhh
Q 036950 407 KKDVQFYGNIFAKINKLEQA 426 (469)
Q Consensus 407 ~~e~~~~~~mf~~~~~~~~~ 426 (469)
++++++|++||+++...+..
T Consensus 403 ~a~~~~~~~~f~k~~~~d~~ 422 (457)
T 1kt0_A 403 ERDRRIYANMFKKFAEQDAK 422 (457)
T ss_dssp HHHHHHHHHC----------
T ss_pred HHHHHHHHHHHhhhhhcccc
Confidence 99999999999998876654
No 2
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=2.2e-51 Score=410.44 Aligned_cols=273 Identities=76% Similarity=1.154 Sum_probs=213.5
Q ss_pred CCCCcEEEEEeCCCCCCCCCCCCCCCCCCcceEEEEeecceeeccccccCCceEEEEEecCCccCCCCCCCEEEEEEEEE
Q 036950 1 MKKGENAVFTIPPELAYGESGSPPTIPPNAMLQFDVELLGWTSVKDICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVR 80 (469)
Q Consensus 1 m~~Ge~~~~~~~p~~~yg~~g~~~~ip~~~~l~f~v~l~~~~~~~dv~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~ 80 (469)
|++||++.|+|||++|||+.|+++.||+|++|+|+|+|++|..+.|+..|+++.++++.+|.|+.+|..||.|.+||+++
T Consensus 77 m~~Ge~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~ 156 (356)
T 3jxv_A 77 MKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEAR 156 (356)
T ss_dssp -----------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcEEeccccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeecc
Q 036950 81 LEDGTLISKSDGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKT 160 (469)
Q Consensus 81 ~~~G~~~~~t~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 160 (469)
+.||++|+++.++.|.+|.+++++||+.+|.+|++||++.++|||+++||+.+.+...+...||++++|+|+|+|++|..
T Consensus 157 l~dgt~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~ 236 (356)
T 3jxv_A 157 LEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKT 236 (356)
T ss_dssp ETTSCEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEEC
T ss_pred ECCCCEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEec
Confidence 99999999988999999999999999999999999999999999999999998875544457999999999999999999
Q ss_pred ccccccchhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcE
Q 036950 161 VSDITKDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEV 234 (469)
Q Consensus 161 ~~dv~~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~ 234 (469)
+.++..+.+++++++++|.|...|. +|+ .+++.||++||++.+.++.|++|.+|.+++|+||+.+|.+|++||+
T Consensus 237 v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~ 316 (356)
T 3jxv_A 237 VTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEV 316 (356)
T ss_dssp EEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCE
T ss_pred ccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCE
Confidence 8999999999999999999976666 555 8999999999998556689999999999999999999999999999
Q ss_pred EEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeee
Q 036950 235 ALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIK 274 (469)
Q Consensus 235 ~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~ 274 (469)
+.|+|||.+|||+.+... ...||++++|+|+|+|++|.+
T Consensus 317 ~~v~ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 317 ALVTIPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EEEEECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 999999999999987532 256999999999999999874
No 3
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=2.6e-38 Score=304.19 Aligned_cols=226 Identities=39% Similarity=0.621 Sum_probs=197.4
Q ss_pred cceeeccccc--cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhc
Q 036950 39 LGWTSVKDIC--KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKT 112 (469)
Q Consensus 39 ~~~~~~~dv~--~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~g 112 (469)
++|.. .|++ .++|+.|+++++|+|..+|..||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+
T Consensus 38 ~~~~~-~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~g 116 (280)
T 1q1c_A 38 LPMEG-VDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIAT 116 (280)
T ss_dssp ---CC-EECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTT
T ss_pred cCccc-cccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhc
Confidence 45544 5777 789999999999999656999999999999999899999987 5899999999999999999999
Q ss_pred ccCCcEEEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccccc--cchhhhhhhhhcCCCCCCCc---e-
Q 036950 113 MKKGEKVLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSDIT--KDKKVLKKILKEGDGYENQM---M- 186 (469)
Q Consensus 113 mk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~dv~--~d~~l~k~il~~G~g~~~p~---~- 186 (469)
|++|+++.|.|||++|||..+.+ +.||++++|+|+|+|+++.. .++. .++++.++++++|+|...|. +
T Consensus 117 m~~Ge~~~v~ipp~~aYG~~g~~-----~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V 190 (280)
T 1q1c_A 117 MKVGEVCHITCKPEYAYGSAGSP-----PKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIV 190 (280)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEE
T ss_pred CCCCCEEEEEECcHHhCCCcCcc-----CCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceE
Confidence 99999999999999999998764 56999999999999999976 4555 67889999999999986555 4
Q ss_pred -EE-EEEecCCcEEEecCCCCCCcEEEEcCCCc---cchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCc
Q 036950 187 -VQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQ---VIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANS 261 (469)
Q Consensus 187 -V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~---v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~ 261 (469)
|+ .+++ +|++||+ .|+.|.+|.+. +|+||+.+|.+|++||++.|+|||+++||+.+.+. ..||+|+
T Consensus 191 ~i~y~g~~-dG~~fd~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~--~~IP~~~ 261 (280)
T 1q1c_A 191 EVALEGYY-KDKLFDQ------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNA 261 (280)
T ss_dssp EEEEEEEE-TTEEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGG--GTBCTTC
T ss_pred EEEEEEEe-CCEEEec------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCcc--CccCCCC
Confidence 44 7777 8999997 38999999997 59999999999999999999999999999987642 2599999
Q ss_pred eEEEEEEEeeeeecccccC
Q 036950 262 TLFYEVELVSFIKEKESWD 280 (469)
Q Consensus 262 ~l~f~vel~~~~~~~~~~~ 280 (469)
+++|+|+|++|.+.++.|+
T Consensus 262 ~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 262 ELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp CEEEEEEEEEEECCCC---
T ss_pred eEEEEEEEEEEeCCCCCCC
Confidence 9999999999999998885
No 4
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=1.4e-38 Score=317.74 Aligned_cols=221 Identities=40% Similarity=0.679 Sum_probs=101.4
Q ss_pred ccccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEE
Q 036950 46 DICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLL 121 (469)
Q Consensus 46 dv~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~ 121 (469)
...+++|+.|+++++|+|+..|..||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++.|
T Consensus 6 ~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~ 85 (356)
T 3jxv_A 6 NEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALF 85 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCCEEEE
Confidence 445688999999999999778999999999999998899999988 6899999999999999999999999999999
Q ss_pred EEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccccccchhhhhhhhhcCCCCCCCc-----eEE-EEEecCC
Q 036950 122 TVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSDITKDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDG 195 (469)
Q Consensus 122 ~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~dv~~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g 195 (469)
.|||++|||+.+.+ +.||++++|+|+|+|++|..+.|+..|.++.++++++|.|+..|. +|+ .+++.||
T Consensus 86 ~ip~~~aYG~~g~~-----~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dg 160 (356)
T 3jxv_A 86 TIPPELAYGESGSP-----PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDG 160 (356)
T ss_dssp -------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS
T ss_pred EEChHHhCCCCCCC-----CCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCC
Confidence 99999999998874 569999999999999999998999999999999999999988887 566 9999999
Q ss_pred cEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCccc--ccCCCCCceEEEEEEEeeee
Q 036950 196 TVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKE--LAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 196 ~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~--~~~ip~~~~l~f~vel~~~~ 273 (469)
++|+++ .++.|.+|++.+++||+.+|.+|++||+++|+|||+++||+.|.+.. ...||++++|+|+|+|+++.
T Consensus 161 t~~~~~-----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~ 235 (356)
T 3jxv_A 161 TVVSKS-----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWK 235 (356)
T ss_dssp CEEEEE-----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEE
T ss_pred CEEecc-----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEe
Confidence 999986 38999999999999999999999999999999999999999887631 13599999999999999997
Q ss_pred ecc
Q 036950 274 KEK 276 (469)
Q Consensus 274 ~~~ 276 (469)
...
T Consensus 236 ~v~ 238 (356)
T 3jxv_A 236 TVT 238 (356)
T ss_dssp CEE
T ss_pred ccc
Confidence 533
No 5
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-33 Score=280.99 Aligned_cols=248 Identities=34% Similarity=0.529 Sum_probs=180.9
Q ss_pred chhhhhhhhhcCCCCCCCc-----eEE-EEEecC-CcEEEecCCCCCCcEEEEcCCC-ccchhHHHHHhccccCcEEEEE
Q 036950 167 DKKVLKKILKEGDGYENQM-----MVQ-WFKLHD-GTVFVKKGHDEEPLFEFKIDEE-QVIDGLDRAVKTMKKGEVALVT 238 (469)
Q Consensus 167 d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~-g~~~d~~~~~~~~p~~~~lG~~-~v~~gle~~L~~m~~Ge~~~~~ 238 (469)
++++.++++++|.|. .|. +|+ .|++++ |++||++ +.++.|++|.+|.+ .+|+||+.+|.+|++||++.|+
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~~g~~fd~~-~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDT-WHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEEEEEEETTTCCCCEEH-HHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcCCCcEeecc-cCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 568999999999997 444 455 888885 9999998 56678999999999 8999999999999999999999
Q ss_pred EcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeecc---cccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHH
Q 036950 239 IEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKEK---ESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQ 315 (469)
Q Consensus 239 i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~~---~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~ 315 (469)
|||.++||..+... .+.||++++++|.|+|+++...+ ..|.++.+++++.+..+++.|+.+|+.|+|.+|+..|++
T Consensus 126 i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~ 204 (338)
T 2if4_A 126 VGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEM 204 (338)
T ss_dssp ECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHH
T ss_pred ECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999999987632 24699999999999999998644 578899999999999999999999999999999999999
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-----------------------H
Q 036950 316 AVNYIGYDS--SFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-----------------------K 370 (469)
Q Consensus 316 al~~~~~~~--~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-----------------------~ 370 (469)
|+.+.+... ............+...+|+|+|.||+++++|++|+.+|++||+++ +
T Consensus 205 Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~ 284 (338)
T 2if4_A 205 AIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSAR 284 (338)
T ss_dssp HHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 999876532 111223344556666799999999999999999999999999998 7
Q ss_pred HHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 036950 371 LDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFAKINK 422 (469)
Q Consensus 371 ~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~~~~~ 422 (469)
.+|+++++++|++. .++..|..+..+.+...+++++.|++||+....
T Consensus 285 ~~l~~al~l~p~~~-----~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 285 DDFRKAQKYAPDDK-----AIRRELRALAEQEKALYQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp HHHHHTTC--------------------------------------------
T ss_pred HHHHHHHHHCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 78999999999999 999999999888888999999999999987554
No 6
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=3.3e-31 Score=263.29 Aligned_cols=252 Identities=37% Similarity=0.666 Sum_probs=229.7
Q ss_pred cccccchhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCc---cchhHHHHHhccccC
Q 036950 162 SDITKDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQ---VIDGLDRAVKTMKKG 232 (469)
Q Consensus 162 ~dv~~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~---v~~gle~~L~~m~~G 232 (469)
.+++.++++.++|+++|.|...|. +|+ .|++ +|++||++ |++|.+|.|. +++||+.||..|++|
T Consensus 19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~------~~~f~lG~g~~~~~~~~~e~al~~~~~G 91 (336)
T 1p5q_A 19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKG 91 (336)
T ss_dssp ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTT
T ss_pred eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC------CeEEEeCCCCccccchHHHHHHhcCCCC
Confidence 456678999999999999986676 455 8888 99999985 8999999986 599999999999999
Q ss_pred cEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeecccccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHH
Q 036950 233 EVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKR 312 (469)
Q Consensus 233 e~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~ 312 (469)
|++.|.++|.++||..|... ..||+++.+.|+++|.++.+....|.+..+.....+..+...|+.+|+.|+|.+|+..
T Consensus 92 e~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~ 169 (336)
T 1p5q_A 92 EHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQ 169 (336)
T ss_dssp CEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 99999999999999988753 3599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-----------------------
Q 036950 313 YEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD----------------------- 369 (469)
Q Consensus 313 Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d----------------------- 369 (469)
|++|+.+.+.......+.......+...+|+|+|.||+++++|++|+.+|++||+++
T Consensus 170 y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 249 (336)
T 1p5q_A 170 YKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELA 249 (336)
T ss_dssp HHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 999999999887777788888899999999999999999999999999999999998
Q ss_pred HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhchhhh
Q 036950 370 KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFAKINKLEQAK 427 (469)
Q Consensus 370 ~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~~~~~~~~~~ 427 (469)
+.+|++|++++|++. .+...+..+...+.++.+.++++|++||+++....+.+
T Consensus 250 ~~~~~~al~l~P~~~-----~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 302 (336)
T 1p5q_A 250 RADFQKVLQLYPNNK-----AAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 302 (336)
T ss_dssp HHHHHHHHHHCSSCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 678999999999999 99999999999999999999999999999988765543
No 7
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.96 E-value=1.9e-27 Score=246.05 Aligned_cols=276 Identities=26% Similarity=0.414 Sum_probs=213.2
Q ss_pred CCCCcEEEEEeCCCCCCCCCCCCCCCCCCcceEEEEeecceeeccccccCCceEEEEEecCCccCCCCCCCEEEEEEEEE
Q 036950 1 MKKGENAVFTIPPELAYGESGSPPTIPPNAMLQFDVELLGWTSVKDICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVR 80 (469)
Q Consensus 1 m~~Ge~~~~~~~p~~~yg~~g~~~~ip~~~~l~f~v~l~~~~~~~dv~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~ 80 (469)
|++||++.|+|||++|||..|+|+.||+|++++|+|++++|.. .++..|++++++++..|.|+.+|..||.|++||+++
T Consensus 97 m~~Ge~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~-~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~ 175 (457)
T 1kt0_A 97 MKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG-EDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGR 175 (457)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceeec-ccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEE
Confidence 9999999999999999999999999999999999999999987 477789999999999999988999999999999999
Q ss_pred ecCCcEEeccccEEEEECCCc---cchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeee
Q 036950 81 LEDGTLISKSDGVEFTVGDGY---FCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVS 157 (469)
Q Consensus 81 ~~~G~~~~~t~~~~~~ig~~~---~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~ 157 (469)
+ +|++|++ +++.|.+|.|. ++++|+.|+..|+.|+++.+.++|.++|+..+... ..||+++.+.|.+.+.+
T Consensus 176 ~-~g~~f~~-~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~----~~ip~~~~l~y~~~l~~ 249 (457)
T 1kt0_A 176 C-GGRMFDC-RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPK----FGIEPNAELIYEVTLKS 249 (457)
T ss_dssp E-TTEEEEE-EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGG----GTBCTTCCEEEEEEEEE
T ss_pred e-CCeEEec-CceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcc----cCCCCCCEEEEEhhhhh
Confidence 8 8999997 57999999774 89999999999999999999999999999988642 34889999999999998
Q ss_pred eccccccccch-----hhhhhhhhcCCCCCCCceEEEEEecCCcEEEecCCCCCCcEEEEcCC-CccchhHHHHHhcccc
Q 036950 158 WKTVSDITKDK-----KVLKKILKEGDGYENQMMVQWFKLHDGTVFVKKGHDEEPLFEFKIDE-EQVIDGLDRAVKTMKK 231 (469)
Q Consensus 158 ~~~~~dv~~d~-----~l~k~il~~G~g~~~p~~V~~~~l~~g~~~d~~~~~~~~p~~~~lG~-~~v~~gle~~L~~m~~ 231 (469)
+....+...-. .........| ..+. ..|+ ...+.-++.+|...
T Consensus 250 ~~~A~~~~~~~~~~~~~~a~~~~~~G-----------------~~~~------------~~g~~~~A~~~y~~Al~~~-- 298 (457)
T 1kt0_A 250 FEKAKESWEMDTKEKLEQAAIVKEKG-----------------TVYF------------KGGKYMQAVIQYGKIVSWL-- 298 (457)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHH-----------------HHHH------------HTTCHHHHHHHHHHHHHHH--
T ss_pred cccCcchhhcCHHHHHHHHHHHHHHH-----------------HHHH------------hCCCHHHHHHHHHHHHHHh--
Confidence 86644321100 0000000111 0000 0111 03344445555321
Q ss_pred CcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeecccccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHH
Q 036950 232 GEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASK 311 (469)
Q Consensus 232 Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~ 311 (469)
|.. .. +. .+. ..+..-..+..+.+.|..+++.++|.+|+.
T Consensus 299 ---------p~~-----------------~~---------~~--~~~---~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 338 (457)
T 1kt0_A 299 ---------EME-----------------YG---------LS--EKE---SKASESFLLAAFLNLAMCYLKLREYTKAVE 338 (457)
T ss_dssp ---------TTC-----------------CS---------CC--HHH---HHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ---------ccc-----------------cc---------CC--hHH---HHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 110 00 00 000 001122345667799999999999999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 312 RYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 312 ~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.|++||.+.+.. ..+|+|+|.||+++++|++|+.++++||+++
T Consensus 339 ~~~~al~~~p~~---------------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 339 CCDKALGLDSAN---------------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCcc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 999999987765 6789999999999999999999999999998
No 8
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.95 E-value=6.5e-28 Score=231.74 Aligned_cols=155 Identities=37% Similarity=0.677 Sum_probs=142.7
Q ss_pred CCCCcEEEEEeCCCCCCCCCCCCCCCCCCcceEEEEeecceeeccccc--cCCceEEEEEecCCccCCCCCCCEEEEEEE
Q 036950 1 MKKGENAVFTIPPELAYGESGSPPTIPPNAMLQFDVELLGWTSVKDIC--KDGGIFKKILVEGKKWENPKDLDEVFVKYE 78 (469)
Q Consensus 1 m~~Ge~~~~~~~p~~~yg~~g~~~~ip~~~~l~f~v~l~~~~~~~dv~--~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~ 78 (469)
|++||++.|+|||++|||+.|+++.||+|++|+|+|+++++.. .++. .|+++.++++++|+|...|+.||.|++||+
T Consensus 117 m~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~ 195 (280)
T 1q1c_A 117 MKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALE 195 (280)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEE
T ss_pred CCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEEE
Confidence 8999999999999999999999999999999999999999986 5666 799999999999999667999999999999
Q ss_pred EEecCCcEEeccccEEEEECCCc---cchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEee
Q 036950 79 VRLEDGTLISKSDGVEFTVGDGY---FCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEM 155 (469)
Q Consensus 79 ~~~~~G~~~~~t~~~~~~ig~~~---~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l 155 (469)
+++ +|++|++ +|+.|.+|.++ +++||+++|.+|++|+++.|.|||+++||..+.+. ..||+|++++|+|+|
T Consensus 196 g~~-dG~~fd~-~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~----~~IP~~~~l~f~V~L 269 (280)
T 1q1c_A 196 GYY-KDKLFDQ-RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK----FQIPPNAELKYELHL 269 (280)
T ss_dssp EEE-TTEEEEE-EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGG----GTBCTTCCEEEEEEE
T ss_pred EEe-CCEEEec-CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCcc----CccCCCCeEEEEEEE
Confidence 998 9999997 69999999987 59999999999999999999999999999887531 249999999999999
Q ss_pred eeecccc
Q 036950 156 VSWKTVS 162 (469)
Q Consensus 156 ~~~~~~~ 162 (469)
+++....
T Consensus 270 ~~i~~~~ 276 (280)
T 1q1c_A 270 KSFEKAK 276 (280)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 9997654
No 9
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.90 E-value=5.7e-23 Score=204.04 Aligned_cols=238 Identities=19% Similarity=0.281 Sum_probs=165.2
Q ss_pred cCCceEEEEEecCCccCCCCCCCEEEEEEEEEec-CCcEEecc----ccEEEEECCC-ccchhHHHHHhcccCCcEEEEE
Q 036950 49 KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLE-DGTLISKS----DGVEFTVGDG-YFCAALAKAVKTMKKGEKVLLT 122 (469)
Q Consensus 49 ~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~-~G~~~~~t----~~~~~~ig~~-~~~~gle~aL~gmk~Ge~~~~~ 122 (469)
.++|+.++++.+|+| ..|..||.|+|||++++. +|++|+++ .|+.|.+|.+ ++++||+++|.+|++||++.|.
T Consensus 47 ~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 47 LDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp EETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 468999999999999 699999999999999987 49999987 6999999999 8999999999999999999999
Q ss_pred EcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccccccchhh-hhhhhhcCCCCCCCceEEEEEecCCcEEEec
Q 036950 123 VKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSDITKDKKV-LKKILKEGDGYENQMMVQWFKLHDGTVFVKK 201 (469)
Q Consensus 123 ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~dv~~d~~l-~k~il~~G~g~~~p~~V~~~~l~~g~~~d~~ 201 (469)
|||.++||..+... .+.||+++++.|.|+|+++....+....... ....+.... ....-|..+..
T Consensus 126 i~~~~~yg~~~~~~---~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~----------~~~~~g~~~~~- 191 (338)
T 2if4_A 126 VGWELAYGKEGNFS---FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAAD----------RRKMDGNSLFK- 191 (338)
T ss_dssp ECGGGSSCSSCCCS---SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHH----------HHHHHHHHTCS-
T ss_pred ECHHHhcCCCCCCC---CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHH----------HHHHHHHHHHh-
Confidence 99999999987631 1458999999999999998764332100000 000000000 00000111000
Q ss_pred CCCCCCcEEEEcCC-CccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeecccccC
Q 036950 202 GHDEEPLFEFKIDE-EQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKEKESWD 280 (469)
Q Consensus 202 ~~~~~~p~~~~lG~-~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~~~~~~ 280 (469)
.|+ ...+.-++.+|...... ..|...+
T Consensus 192 -----------~g~~~~A~~~y~~Al~~~p~~----------~~~~~~~------------------------------- 219 (338)
T 2if4_A 192 -----------EEKLEEAMQQYEMAIAYMGDD----------FMFQLYG------------------------------- 219 (338)
T ss_dssp -----------SSCCHHHHHHHHHHHHHSCHH----------HHHTCCH-------------------------------
T ss_pred -----------cCCHHHHHHHHHHHHHHhccc----------hhhhhcc-------------------------------
Confidence 110 02333444444321100 0000000
Q ss_pred CChHHHH--HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHH
Q 036950 281 MNTQEKI--EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQA 358 (469)
Q Consensus 281 l~~~e~~--~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~a 358 (469)
...+.. -....+.+.|..+++.++|.+|+..|++||.+.+.. ..+|+|+|.||+.+++|++|
T Consensus 220 -~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~a~~~~g~~~~A 283 (338)
T 2if4_A 220 -KYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN---------------PKALFRRGKAKAELGQMDSA 283 (338)
T ss_dssp -HHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHH
Confidence 001111 112356789999999999999999999999987754 67899999999999999999
Q ss_pred HHHHHHHHhhc
Q 036950 359 EKLCSKVLELD 369 (469)
Q Consensus 359 i~~~~~al~~d 369 (469)
+.+++++++++
T Consensus 284 ~~~l~~al~l~ 294 (338)
T 2if4_A 284 RDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHTTC--
T ss_pred HHHHHHHHHHC
Confidence 99999999998
No 10
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.86 E-value=2.3e-21 Score=165.95 Aligned_cols=121 Identities=36% Similarity=0.607 Sum_probs=102.8
Q ss_pred cccc--cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcE
Q 036950 45 KDIC--KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEK 118 (469)
Q Consensus 45 ~dv~--~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~ 118 (469)
.|++ +++|++|+++++|+|...|+.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++
T Consensus 6 ~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~ 85 (135)
T 1r9h_A 6 IDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEV 85 (135)
T ss_dssp EECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCE
T ss_pred eecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCE
Confidence 3566 789999999999999557999999999999998899999987 6999999999999999999999999999
Q ss_pred EEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccccc--cchhhh
Q 036950 119 VLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSDIT--KDKKVL 171 (469)
Q Consensus 119 ~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~dv~--~d~~l~ 171 (469)
+.|.|||++|||+.+.+ +.||++++|+|+|+|+++.. .++. .|++++
T Consensus 86 ~~v~ip~~~aYG~~g~~-----~~Ip~~~~l~f~v~l~~i~~-~~l~~~~d~~v~ 134 (135)
T 1r9h_A 86 AEFTIRSDYGYGDAGSP-----PKIPGGATLIFEVELFEWSA-EDISPDRDGTIL 134 (135)
T ss_dssp EEEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-------------
T ss_pred EEEEEChHHcCCCCCCC-----CCcCcCCcEEEEEEEEEeec-CCcCcCCCCccc
Confidence 99999999999998764 56999999999999999976 3554 455554
No 11
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.86 E-value=2.6e-21 Score=167.42 Aligned_cols=111 Identities=37% Similarity=0.589 Sum_probs=103.1
Q ss_pred cccc--cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcE
Q 036950 45 KDIC--KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEK 118 (469)
Q Consensus 45 ~dv~--~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~ 118 (469)
+|++ .|+|++|+++++|+|...|..||.|.|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++
T Consensus 27 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~ 106 (144)
T 3o5e_A 27 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEI 106 (144)
T ss_dssp EECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCE
T ss_pred ccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCE
Confidence 6676 799999999999999658999999999999999899999987 6899999999999999999999999999
Q ss_pred EEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeecc
Q 036950 119 VLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKT 160 (469)
Q Consensus 119 ~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 160 (469)
+.|.|||++|||..+.+ +.||++++|+|+|+|++|..
T Consensus 107 ~~v~ipp~~aYG~~g~~-----~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 107 CHLLCKPEYAYGSAGSL-----PKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp EEEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHCcCCCCCC-----CCcCCCCeEEEEEEEEEecC
Confidence 99999999999998874 56999999999999999853
No 12
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.86 E-value=3.7e-21 Score=163.20 Aligned_cols=111 Identities=37% Similarity=0.589 Sum_probs=102.4
Q ss_pred cccc--cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcE
Q 036950 45 KDIC--KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEK 118 (469)
Q Consensus 45 ~dv~--~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~ 118 (469)
+|++ +|+|++|+++++|+|...|+.||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~ 90 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEI 90 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred ceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCE
Confidence 4555 789999999999999557999999999999999999999987 6899999999999999999999999999
Q ss_pred EEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeecc
Q 036950 119 VLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKT 160 (469)
Q Consensus 119 ~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 160 (469)
+.|.|||++|||+.+.+ +.||++++|+|+|+|+++..
T Consensus 91 ~~v~ip~~~aYG~~g~~-----~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 91 CHLLCKPEYAYGSAGSL-----PKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp EEEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHcCCCCCCC-----CCcCCCCEEEEEEEEEEecC
Confidence 99999999999998874 56999999999999999853
No 13
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.85 E-value=6e-21 Score=160.03 Aligned_cols=105 Identities=35% Similarity=0.541 Sum_probs=97.2
Q ss_pred CCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc-----------ccEEEEECCCccchhHHHHHhcccCCcE
Q 036950 50 DGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS-----------DGVEFTVGDGYFCAALAKAVKTMKKGEK 118 (469)
Q Consensus 50 d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t-----------~~~~~~ig~~~~~~gle~aL~gmk~Ge~ 118 (469)
++|+.|+++++|+|...|+.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 68999999999999667999999999999999899999987 5899999999999999999999999999
Q ss_pred EEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 119 VLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 119 ~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
+.|.|||++|||+.+.+. ..||++++|+|+|+|+++
T Consensus 83 ~~v~ip~~~aYG~~g~~~----~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQPD----AKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEECGGGTTCTTCBGG----GTBCTTCCEEEEEEEEEE
T ss_pred EEEEECcHHhcCCCCCCC----CccCcCCeEEEEEEEEEe
Confidence 999999999999987641 359999999999999986
No 14
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.84 E-value=8.6e-21 Score=165.59 Aligned_cols=109 Identities=28% Similarity=0.432 Sum_probs=98.6
Q ss_pred cCCceEEEEEecCCcc-CCCCCCCEEEEEEEEEecCCcEEeccccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCc
Q 036950 49 KDGGIFKKILVEGKKW-ENPKDLDEVFVKYEVRLEDGTLISKSDGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQY 127 (469)
Q Consensus 49 ~d~g~~~~i~~~G~g~-~~~~~gd~V~i~y~~~~~~G~~~~~t~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ 127 (469)
.++.+.|+++++|+|. ..|..||.|++||++++.||++|++++|+.|.+|.+++++||+++|.+|++|++++|.|||++
T Consensus 41 ~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~IP~~~ 120 (157)
T 2jwx_A 41 GNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKY 120 (157)
T ss_dssp SSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEEEEEEEETTTTSSCHHHHHHTTTSCTTCEEEEEECGGG
T ss_pred CCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEECchh
Confidence 3444589999999993 389999999999999988999999989999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCCCCCCCCCceEEEeEeeeeecccc
Q 036950 128 AFGKNG-RPATGDEDAVPSNANLHITLEMVSWKTVS 162 (469)
Q Consensus 128 ayg~~~-~~~~~~~~~ip~~~~l~~~v~l~~~~~~~ 162 (469)
+||..+ .+ +.||++++|+|+|+|+++....
T Consensus 121 aYG~~g~~~-----~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 121 CYGPQGSRS-----PYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp TTTTTCCSS-----SCCCTTCCEEEEEEEEEEEECS
T ss_pred cCCcccccC-----CCcCCCCeEEEEEEEEEEEccc
Confidence 999987 42 4699999999999999987654
No 15
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.84 E-value=2.1e-20 Score=156.28 Aligned_cols=110 Identities=30% Similarity=0.438 Sum_probs=100.1
Q ss_pred cccccCCceEEEEEecCCcc-CCCCCCCEEEEEEEEEecCCcEEeccccEEEEECCCccchhHHHHHhcccCCcEEEEEE
Q 036950 45 KDICKDGGIFKKILVEGKKW-ENPKDLDEVFVKYEVRLEDGTLISKSDGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTV 123 (469)
Q Consensus 45 ~dv~~d~g~~~~i~~~G~g~-~~~~~gd~V~i~y~~~~~~G~~~~~t~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~i 123 (469)
.+++.++++.|+++++|+|. ..|+.||.|++||++++.+|++|++++|+.|.+|.+++++||+++|.+|++|+++.|.|
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~i 86 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 86 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEEEEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEE
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECCCCEEEEECCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 34556677999999999994 27999999999999998899999988999999999999999999999999999999999
Q ss_pred cCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeec
Q 036950 124 KPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWK 159 (469)
Q Consensus 124 p~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 159 (469)
||++|||..+.+ +.||++++|+|+|+|+++.
T Consensus 87 p~~~ayG~~~~~-----~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 87 DSKYCYGPQGRS-----PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEE
T ss_pred ChHHccCCCCCC-----CccCCCCeEEEEEEEEEec
Confidence 999999998764 4699999999999999874
No 16
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.84 E-value=2.7e-20 Score=154.53 Aligned_cols=105 Identities=26% Similarity=0.411 Sum_probs=96.7
Q ss_pred cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEEEc
Q 036950 49 KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVK 124 (469)
Q Consensus 49 ~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip 124 (469)
.++|+.++++++|+|...|+.||.|.+||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++.|.||
T Consensus 4 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ip 83 (113)
T 1yat_A 4 IEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIP 83 (113)
T ss_dssp CGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEEC
T ss_pred CCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEEC
Confidence 467999999999999434999999999999998899999987 5899999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 125 PQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 125 ~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
|+++||+.+.+ +.||++++|+|+|+|+++
T Consensus 84 ~~~ayG~~~~~-----~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 84 GPYAYGPRGFP-----GLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEE
T ss_pred HHHCcCCCCCC-----CCcCCCCeEEEEEEEEEe
Confidence 99999998764 459999999999999886
No 17
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.84 E-value=7.6e-21 Score=170.40 Aligned_cols=124 Identities=34% Similarity=0.470 Sum_probs=95.4
Q ss_pred cchhhhhhhhhcCCCCCCCc----eEE-EEEec-CCcEEEecCCCCCCcEEEEcCCC-ccchhHHHHHhccccCcEEEEE
Q 036950 166 KDKKVLKKILKEGDGYENQM----MVQ-WFKLH-DGTVFVKKGHDEEPLFEFKIDEE-QVIDGLDRAVKTMKKGEVALVT 238 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~----~V~-~~~l~-~g~~~d~~~~~~~~p~~~~lG~~-~v~~gle~~L~~m~~Ge~~~~~ 238 (469)
.++++.++++++|+|..... +|+ .+++. +|++||++ +.++.|+.|.+|.+ .+++||+.+|.+|++||++.|+
T Consensus 47 ~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss-~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~ 125 (180)
T 2f4e_A 47 LDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDT-WHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (180)
T ss_dssp EETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEET-TTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred CCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEecc-CccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence 35689999999999974332 455 88888 59999998 66688999999999 9999999999999999999999
Q ss_pred EcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeeccc---ccCCChHHHHHHhh
Q 036950 239 IEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKEKE---SWDMNTQEKIEAAG 291 (469)
Q Consensus 239 i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~~~---~~~l~~~e~~~~a~ 291 (469)
|||+++||..+... .+.||++++|+|+|+|+++...++ .|+|+.+||++.|.
T Consensus 126 iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A~ 180 (180)
T 2f4e_A 126 VGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAAD 180 (180)
T ss_dssp ECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC----------------
T ss_pred ECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhcC
Confidence 99999999987631 246999999999999999998877 99999999998773
No 18
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.84 E-value=7.6e-21 Score=162.48 Aligned_cols=110 Identities=25% Similarity=0.424 Sum_probs=98.0
Q ss_pred ccccccCCceEEEEEecCCccCCCCCCCEEEEEEEEEec-CCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcE
Q 036950 44 VKDICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLE-DGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEK 118 (469)
Q Consensus 44 ~~dv~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~-~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~ 118 (469)
.++++.++|++|+++++|+| ..+..||.|++||++++. +|++|+++ +|+.|.+|.+++++||+++|.+|++|++
T Consensus 19 ~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~ 97 (134)
T 3b7x_A 19 MLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGEL 97 (134)
T ss_dssp CEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCE
T ss_pred cceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCE
Confidence 35788899999999999999 688899999999999987 69999987 5899999999999999999999999999
Q ss_pred EEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeec
Q 036950 119 VLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWK 159 (469)
Q Consensus 119 ~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 159 (469)
+.|.|||++|||+.+.+ +.||++++|+|+|+|+++.
T Consensus 98 ~~v~ip~~~aYG~~~~~-----~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 98 ARFLFKPNYAYGTLGCP-----PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp EEEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECHHHCcCCCCCC-----CCcCcCCeEEEEEEEEEEe
Confidence 99999999999998764 4599999999999999875
No 19
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.84 E-value=3.6e-20 Score=152.20 Aligned_cols=102 Identities=27% Similarity=0.495 Sum_probs=94.6
Q ss_pred ceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCc
Q 036950 52 GIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQY 127 (469)
Q Consensus 52 g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ 127 (469)
|+.|+++++|+|...|+.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++.|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 688999999999444999999999999998899999987 6999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 128 AFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 128 ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
+||+.+.+ +.||++++|+|+|+|+++
T Consensus 81 ayG~~~~~-----~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 81 AYGATGHP-----GIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTTTCBT-----TTBCTTCCEEEEEEEEEE
T ss_pred ccCCCCCC-----CCcCCCCeEEEEEEEEEe
Confidence 99998764 469999999999999886
No 20
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.83 E-value=5.8e-20 Score=155.30 Aligned_cols=109 Identities=24% Similarity=0.382 Sum_probs=99.6
Q ss_pred ccccCCceEEEEEecCCc-cCCCCCCCEEEEEEEEEec-CCcEEecc------ccEEEEECCCccchhHHHHHhcccCCc
Q 036950 46 DICKDGGIFKKILVEGKK-WENPKDLDEVFVKYEVRLE-DGTLISKS------DGVEFTVGDGYFCAALAKAVKTMKKGE 117 (469)
Q Consensus 46 dv~~d~g~~~~i~~~G~g-~~~~~~gd~V~i~y~~~~~-~G~~~~~t------~~~~~~ig~~~~~~gle~aL~gmk~Ge 117 (469)
.+..++++.++++.+|++ +..|+.||.|.+||++++. ||++|+++ .|+.|.+|.+++++||+++|.+|++|+
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGE 86 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTC
T ss_pred eEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCC
Confidence 345688999999999993 2789999999999999997 99999987 689999999999999999999999999
Q ss_pred EEEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeecc
Q 036950 118 KVLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKT 160 (469)
Q Consensus 118 ~~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 160 (469)
++.|.|||++|||+.+. +.||++++|+|+|+|+++..
T Consensus 87 ~~~~~ip~~~aYG~~g~------~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 87 KRKLIIPPALGYGKEGK------GKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEEEECGGGTTTTTCB------TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHhcCCCCC------CCCCCCCeEEEEEEEEEEEc
Confidence 99999999999999885 35999999999999999865
No 21
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.83 E-value=5.3e-20 Score=156.78 Aligned_cols=106 Identities=28% Similarity=0.453 Sum_probs=98.3
Q ss_pred cccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEE
Q 036950 47 ICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLT 122 (469)
Q Consensus 47 v~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ 122 (469)
...++|+.++++++|+| ..|+.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++.|.
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 34688999999999999 79999999999999998899999987 68999999999999999999999999999999
Q ss_pred EcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 123 VKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 123 ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
|||+++||+.+.+ +.||++++|+|+|+|+++
T Consensus 103 ip~~~aYG~~~~~-----~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAG-----GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCC-----CCCCCCCeEEEEEEEEEC
Confidence 9999999998764 469999999999999874
No 22
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.83 E-value=1e-19 Score=154.69 Aligned_cols=109 Identities=29% Similarity=0.541 Sum_probs=97.1
Q ss_pred cccCCceEEEEEecC-Cc-cCCCCCCCEEEEEEEEEe-cCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEE
Q 036950 47 ICKDGGIFKKILVEG-KK-WENPKDLDEVFVKYEVRL-EDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKV 119 (469)
Q Consensus 47 v~~d~g~~~~i~~~G-~g-~~~~~~gd~V~i~y~~~~-~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~ 119 (469)
++.++.++++++++| .| +..|+.||.|++||++++ .+|++|+++ .|+.|.+|.+++++||+++|.+|++|+++
T Consensus 12 ~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~ 91 (129)
T 2vn1_A 12 LTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKC 91 (129)
T ss_dssp CSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEE
T ss_pred ECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEE
Confidence 345667778899977 44 378999999999999998 799999987 68999999999999999999999999999
Q ss_pred EEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeecc
Q 036950 120 LLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKT 160 (469)
Q Consensus 120 ~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 160 (469)
.|.|||+++||+.+.+ +.||++++|+|+|+|+++..
T Consensus 92 ~v~ip~~~aYG~~~~~-----~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 92 LVRIESMYGYGDEGCG-----ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEChHHcCCCCCCC-----CCcCCCCeEEEEEEEEEEec
Confidence 9999999999998764 46999999999999999865
No 23
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.82 E-value=1.7e-18 Score=171.52 Aligned_cols=233 Identities=22% Similarity=0.342 Sum_probs=169.3
Q ss_pred cccccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEeccccEEEEECCCc---cchhHHHHHhcccCCcEEEE
Q 036950 45 KDICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKSDGVEFTVGDGY---FCAALAKAVKTMKKGEKVLL 121 (469)
Q Consensus 45 ~dv~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t~~~~~~ig~~~---~~~gle~aL~gmk~Ge~~~~ 121 (469)
.++..|++++++|+++|+|..+|..|+.|+|||++++ +|++|+++ |+.|.+|.|. ++++|+.+|.+|++|+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l 96 (336)
T 1p5q_A 19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIV 96 (336)
T ss_dssp ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEE
T ss_pred eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-CeEEEeCCCCccccchHHHHHHhcCCCCCeEEE
Confidence 4566799999999999999668999999999999998 99999986 9999999886 58999999999999999999
Q ss_pred EEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccccccc-----hhhhhhhhhcCCCCCCCceEEEEEecCCc
Q 036950 122 TVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSDITKD-----KKVLKKILKEGDGYENQMMVQWFKLHDGT 196 (469)
Q Consensus 122 ~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~dv~~d-----~~l~k~il~~G~g~~~p~~V~~~~l~~g~ 196 (469)
.|+|..+||..+... ..||+++.+.|++.+.++......... ..........| .
T Consensus 97 ~i~p~~ayg~~g~~~----~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g-----------------~ 155 (336)
T 1p5q_A 97 YLKPSYAFGSVGKEK----FQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERG-----------------T 155 (336)
T ss_dssp EECTTTTTTTTCBGG----GTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHH-----------------H
T ss_pred EECCccccCcCCCCc----cCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHH-----------------H
Confidence 999999999988642 248999999999999998764332110 00000000000 0
Q ss_pred EEEecCCCCCCcEEEEcCC-CccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeec
Q 036950 197 VFVKKGHDEEPLFEFKIDE-EQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKE 275 (469)
Q Consensus 197 ~~d~~~~~~~~p~~~~lG~-~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~ 275 (469)
.+. ..|+ ...+.-++.+|.... . ... +..
T Consensus 156 ~~~------------~~g~~~~A~~~y~~Al~~~p-----------~-----------------~~~---------~~~- 185 (336)
T 1p5q_A 156 VYF------------KEGKYKQALLQYKKIVSWLE-----------Y-----------------ESS---------FSN- 185 (336)
T ss_dssp HHH------------HHTCHHHHHHHHHHHHHHTT-----------T-----------------CCC---------CCS-
T ss_pred HHH------------HCCCHHHHHHHHHHHHHHhh-----------c-----------------ccc---------CCh-
Confidence 000 0111 133444455553211 0 000 000
Q ss_pred ccccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCH
Q 036950 276 KESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEY 355 (469)
Q Consensus 276 ~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~ 355 (469)
+. ..+-.-..+..+.+.|..+++.|+|.+|+..|++|+.+.+.. ..+|+|+|.||+++++|
T Consensus 186 -~~---~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~ 246 (336)
T 1p5q_A 186 -EE---AQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN---------------EKGLSRRGEAHLAVNDF 246 (336)
T ss_dssp -HH---HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCH
T ss_pred -HH---HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHCCCH
Confidence 00 001112335677899999999999999999999999987765 67899999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 036950 356 KQAEKLCSKVLELD 369 (469)
Q Consensus 356 ~~ai~~~~~al~~d 369 (469)
++|+.++++||+++
T Consensus 247 ~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 247 ELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHC
Confidence 99999999999998
No 24
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.82 E-value=6.8e-20 Score=167.72 Aligned_cols=104 Identities=24% Similarity=0.359 Sum_probs=97.3
Q ss_pred ccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc-ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCC
Q 036950 48 CKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS-DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQ 126 (469)
Q Consensus 48 ~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t-~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~ 126 (469)
.+++|+.|+++.+|+| ..|..||.|+|||++++.||++|++| .|+.|.+| ++++||+++|.+|++|++++|.|||+
T Consensus 114 ~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IPp~ 190 (219)
T 3oe2_A 114 ELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQSTQPQWFRLD--SVISGWTSALQNMPTGAKWRLVIPSD 190 (219)
T ss_dssp ECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEECSSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEECGG
T ss_pred ECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeeccCCcEEEEec--chhHHHHHHHhCCCCCCEEEEEECch
Confidence 3789999999999999 79999999999999999999999998 88999887 89999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCceEEEeEeeeeec
Q 036950 127 YAFGKNGRPATGDEDAVPSNANLHITLEMVSWK 159 (469)
Q Consensus 127 ~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 159 (469)
+|||+.+.+ +.|||+++|+|+|+|++|.
T Consensus 191 lAYG~~g~~-----~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 191 QAYGAEGAG-----DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GTTTTTCBT-----TTBCTTCCEEEEEEEEEEE
T ss_pred hcCCCCCCC-----CCCCCCCeEEEEEEEEEEe
Confidence 999998874 4599999999999999875
No 25
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.82 E-value=1e-19 Score=160.49 Aligned_cols=109 Identities=23% Similarity=0.367 Sum_probs=98.5
Q ss_pred cccCCceEEEEEecCCccCC-CCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEE
Q 036950 47 ICKDGGIFKKILVEGKKWEN-PKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLL 121 (469)
Q Consensus 47 v~~d~g~~~~i~~~G~g~~~-~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~ 121 (469)
..+++|+.|+++.+|+| .. |..||.|+|||++++.||++|+++ .|+.|.+ +++++||+++|.+|++|+++.|
T Consensus 33 ~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~ 109 (167)
T 1jvw_A 33 VKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRL 109 (167)
T ss_dssp EECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred EECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEE
Confidence 34689999999999999 66 999999999999998899999987 5788877 6899999999999999999999
Q ss_pred EEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccc
Q 036950 122 TVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSD 163 (469)
Q Consensus 122 ~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d 163 (469)
.|||++|||..+.+ +.||+|++|+|+|+|+++.....
T Consensus 110 ~Ip~~laYG~~g~~-----~~Ipp~s~LiF~VeL~~i~~~~~ 146 (167)
T 1jvw_A 110 FIPYDLAYGVTGGG-----GMIPPYSPLEFDVELISIKDGGK 146 (167)
T ss_dssp EECGGGTTTTTCSS-----SSSCTTCCEEEEEEEEEEGGGCC
T ss_pred EECchhhCCCCCCC-----CCcCCCCeEEEEEEEEEEEcCCC
Confidence 99999999998864 56999999999999999986443
No 26
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=5e-20 Score=157.59 Aligned_cols=113 Identities=30% Similarity=0.441 Sum_probs=101.9
Q ss_pred ccccCCceEEEEEecCCcc-CCCCCCCEEEEEEEEEecCCcEEeccccEEEEECCCccchhHHHHHhcccCCcEEEEEEc
Q 036950 46 DICKDGGIFKKILVEGKKW-ENPKDLDEVFVKYEVRLEDGTLISKSDGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVK 124 (469)
Q Consensus 46 dv~~d~g~~~~i~~~G~g~-~~~~~gd~V~i~y~~~~~~G~~~~~t~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip 124 (469)
+++.++++.|+++++|+|. ..|+.||.|++||++++.||++|+++.|+.|.+|.+++++||+++|.+|++|+++.|.||
T Consensus 12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~ip 91 (135)
T 2d9f_A 12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTAD 91 (135)
T ss_dssp ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEEEEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEEC
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecCCCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEC
Confidence 4555677999999999993 389999999999999988999999889999999999999999999999999999999999
Q ss_pred CCccccCCC-CCCCCCCCCCCCCceEEEeEeeeeeccccc
Q 036950 125 PQYAFGKNG-RPATGDEDAVPSNANLHITLEMVSWKTVSD 163 (469)
Q Consensus 125 ~~~ayg~~~-~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d 163 (469)
|+++||..+ .+ +.||++++|+|+|+|+++....+
T Consensus 92 ~~~aYG~~~~~~-----~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 92 SKYCYGPQGSRS-----PYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp HHHHTCTTCCSS-----SCCCTTCCEEEEEEEEEEESSCS
T ss_pred hhHccCcCCcCC-----CccCCCCeEEEEEEEEEeecCCc
Confidence 999999887 42 46999999999999999977544
No 27
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.82 E-value=9.6e-20 Score=154.63 Aligned_cols=107 Identities=29% Similarity=0.441 Sum_probs=96.8
Q ss_pred cccCCceEEE--EEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEE
Q 036950 47 ICKDGGIFKK--ILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVL 120 (469)
Q Consensus 47 v~~d~g~~~~--i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~ 120 (469)
..+++|+.++ ++++|+|...|+.||.|+++|++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++.
T Consensus 18 ~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 18 GPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred eeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 3457888887 9999999434999999999999998899999987 589999999999999999999999999999
Q ss_pred EEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 121 LTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 121 ~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
|.|||+++||+.+.+ +.||++++|+|+|+|+++
T Consensus 98 v~ip~~~aYG~~~~~-----~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 98 FTIPYQLAYGERGYP-----PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEECTTTSTTTTCCS-----TTSCSSCCEEEEEEEEEC
T ss_pred EEECcHHHCCCCCCC-----CCcCCCCeEEEEEEEEEC
Confidence 999999999998764 459999999999999874
No 28
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.81 E-value=4.7e-20 Score=159.49 Aligned_cols=108 Identities=44% Similarity=0.690 Sum_probs=96.9
Q ss_pred cccc--cchhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCc
Q 036950 162 SDIT--KDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGE 233 (469)
Q Consensus 162 ~dv~--~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge 233 (469)
.|++ .|++++++++++|+|...|. +|+ .+++.||++||++ +.++.|+.|.+|.+.+++||+.+|.+|++||
T Consensus 27 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss-~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge 105 (144)
T 3o5e_A 27 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS-HDRNEPFVFSLGKGQVIKAWDIGVATMKKGE 105 (144)
T ss_dssp EECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEES-GGGTSCEEEETTSSSSCHHHHHHHTTCCBTC
T ss_pred ccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEee-cccCCCeEEEeCCCcccHHHHHHHhCCCCCC
Confidence 3444 67899999999999986665 455 8999999999997 6668899999999999999999999999999
Q ss_pred EEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 234 VALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 234 ~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
++.|+|||.+|||+.+.+ +.|||+++|+|+|+|++|.
T Consensus 106 ~~~v~ipp~~aYG~~g~~---~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 106 ICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp EEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred EEEEEEChHHCcCCCCCC---CCcCCCCeEEEEEEEEEec
Confidence 999999999999998875 4799999999999999986
No 29
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.81 E-value=7.3e-20 Score=153.39 Aligned_cols=104 Identities=39% Similarity=0.518 Sum_probs=91.9
Q ss_pred chhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCC-------CCCcEEEEcCCCccchhHHHHHhccccCc
Q 036950 167 DKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHD-------EEPLFEFKIDEEQVIDGLDRAVKTMKKGE 233 (469)
Q Consensus 167 d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~-------~~~p~~~~lG~~~v~~gle~~L~~m~~Ge 233 (469)
++++.++++++|+|...|. +|+ .+++.||++||++ +. .+.|+.|.+|.+.+++||+.+|.+|++||
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss-~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTN-IQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEEC-CCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEec-cccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 5678999999999976665 455 8899999999998 43 24899999999999999999999999999
Q ss_pred EEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 234 VALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 234 ~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
++.|+|||.+|||+.+.+. ..|||+++|+|+|+|+++.
T Consensus 82 ~~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred EEEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 9999999999999988753 3699999999999999874
No 30
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.81 E-value=4.4e-19 Score=162.65 Aligned_cols=107 Identities=28% Similarity=0.446 Sum_probs=99.5
Q ss_pred ccccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEE
Q 036950 46 DICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLL 121 (469)
Q Consensus 46 dv~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~ 121 (469)
.+.+++|+.|+++.+|+| ..|..||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++.|
T Consensus 99 ~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred ccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 445789999999999999 67999999999999999999999987 6899999999999999999999999999999
Q ss_pred EEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 122 TVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 122 ~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
.|||++|||+.+.+ +.||++++|+|+|+|+++
T Consensus 178 ~Ipp~~aYG~~g~~-----~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 TIPPQLGYGARGAA-----GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EECGGGTTTTTCBT-----TTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCC-----CCcCCCCeEEEEEEEEEC
Confidence 99999999998874 459999999999999874
No 31
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.81 E-value=4.6e-20 Score=161.38 Aligned_cols=83 Identities=20% Similarity=0.308 Sum_probs=76.2
Q ss_pred ccCCceEEEEEecCCccC-CCCCCCEEEEEEEEEec--CCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEE
Q 036950 48 CKDGGIFKKILVEGKKWE-NPKDLDEVFVKYEVRLE--DGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVL 120 (469)
Q Consensus 48 ~~d~g~~~~i~~~G~g~~-~~~~gd~V~i~y~~~~~--~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~ 120 (469)
.+++|+.|+++++|+|.. .+..||.|++||++++. +|++|||| +|+.|.+|.+++|+||+++|.+|++|++++
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~ 86 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQ 86 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence 467899999999999942 23689999999999985 59999998 799999999999999999999999999999
Q ss_pred EEEcCCcccc
Q 036950 121 LTVKPQYAFG 130 (469)
Q Consensus 121 ~~ip~~~ayg 130 (469)
|+|||++|||
T Consensus 87 ~~ipp~laYG 96 (165)
T 2lkn_A 87 FLCDIKHVVL 96 (165)
T ss_dssp EECCHHHHSS
T ss_pred EEECHHHhcC
Confidence 9999999999
No 32
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.80 E-value=3.7e-20 Score=162.00 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=72.0
Q ss_pred cchhhhhhhhhcCCCCCCC--c----eEE-EEEecC--CcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEE
Q 036950 166 KDKKVLKKILKEGDGYENQ--M----MVQ-WFKLHD--GTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVAL 236 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p--~----~V~-~~~l~~--g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~ 236 (469)
.++++.|+++++|+|...+ . +|| .|+|.| |++|||| +.++.|++|.+|.+++|+||+.||.+|++||+++
T Consensus 8 ~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS-~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~ 86 (165)
T 2lkn_A 8 REDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDS-RARGKPMELIIGKKFKLPVWETIVCTMREGEIAQ 86 (165)
T ss_dssp HTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEES-TTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred cCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEec-ccCCCCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence 4678999999999997432 2 566 999964 9999998 7889999999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 036950 237 VTIEPEYAFG 246 (469)
Q Consensus 237 ~~i~~~~~yg 246 (469)
|+|||++|||
T Consensus 87 ~~ipp~laYG 96 (165)
T 2lkn_A 87 FLCDIKHVVL 96 (165)
T ss_dssp EECCHHHHSS
T ss_pred EEECHHHhcC
Confidence 9999999999
No 33
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.80 E-value=9e-20 Score=154.65 Aligned_cols=104 Identities=43% Similarity=0.680 Sum_probs=94.5
Q ss_pred cchhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEE
Q 036950 166 KDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTI 239 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i 239 (469)
.++++.++++++|+|...|. +|+ .+++.||++||++ +.++.|+.|.+|.+++++||+.+|.+|++||++.|+|
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss-~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS-HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEH-HHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEec-CCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 67899999999999986665 455 8899999999998 5557899999999999999999999999999999999
Q ss_pred cCCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 240 EPEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 240 ~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
||.+|||+.+.. +.|||+++|+|+|+|+++.
T Consensus 96 p~~~aYG~~g~~---~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 96 KPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp CGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred ChHHcCCCCCCC---CCcCCCCEEEEEEEEEEec
Confidence 999999998875 4799999999999999986
No 34
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.80 E-value=1.7e-19 Score=153.15 Aligned_cols=110 Identities=21% Similarity=0.317 Sum_probs=97.9
Q ss_pred ccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhc------ccCCc
Q 036950 48 CKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKT------MKKGE 117 (469)
Q Consensus 48 ~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~g------mk~Ge 117 (469)
..++|+.|+++.+|+| ..++.||.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.| |++|+
T Consensus 9 ~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 9 VSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred ECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 3678999999999999 78999999999999998899999987 6899999999999999999999 99999
Q ss_pred EEEEEEcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 118 KVLLTVKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 118 ~~~~~ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
++.|.|||+++||+.+.+.....+.||+|++|+|+|+|+++
T Consensus 88 ~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 88 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999875210011469999999999999876
No 35
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.79 E-value=7.1e-19 Score=157.58 Aligned_cols=111 Identities=26% Similarity=0.428 Sum_probs=100.2
Q ss_pred cCCceEEEEEecCCccCCCCCCCEEEEEEEEEec-CCcEEecc----ccEEEEECCC-ccchhHHHHHhcccCCcEEEEE
Q 036950 49 KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLE-DGTLISKS----DGVEFTVGDG-YFCAALAKAVKTMKKGEKVLLT 122 (469)
Q Consensus 49 ~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~-~G~~~~~t----~~~~~~ig~~-~~~~gle~aL~gmk~Ge~~~~~ 122 (469)
.++|+.|+++.+|+| ..|..||.|++||++++. +|++|+++ .|+.|.+|.+ ++++||+++|.+|++|+++.|.
T Consensus 47 ~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~ 125 (180)
T 2f4e_A 47 LDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (180)
T ss_dssp EETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred CCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence 568999999999999 699999999999999987 69999987 6899999999 9999999999999999999999
Q ss_pred EcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeeccccc
Q 036950 123 VKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKTVSD 163 (469)
Q Consensus 123 ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d 163 (469)
|||+++||..+.+. .+.||++++|+|+|+|+++....+
T Consensus 126 iPp~~aYG~~g~~~---~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 126 VGWELAYGKEGNFS---FPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp ECGGGTTTTTCBSS---SSCBCTTCCEEEEEEEEEESCBCC
T ss_pred ECchHhCCcCCccc---CCCcCCCCeEEEEEEEEEEecCcc
Confidence 99999999887521 145999999999999999987554
No 36
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.79 E-value=6.6e-19 Score=161.31 Aligned_cols=106 Identities=24% Similarity=0.364 Sum_probs=97.2
Q ss_pred cccCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEE
Q 036950 47 ICKDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLT 122 (469)
Q Consensus 47 v~~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ 122 (469)
+.+++|+.|+++.+|+| ..|..||.|+|||++++.||++|+++ .|+.|.+ +++++||+++|.+|++|+++.|.
T Consensus 102 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp EECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEE
Confidence 34689999999999999 89999999999999999999999987 5888888 58999999999999999999999
Q ss_pred EcCCccccCCCCCCCCCCCCCCCCceEEEeEeeeeecc
Q 036950 123 VKPQYAFGKNGRPATGDEDAVPSNANLHITLEMVSWKT 160 (469)
Q Consensus 123 ip~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~ 160 (469)
|||+++||+.+.+ +.||++++|+|+|+|+++..
T Consensus 179 IP~~laYG~~g~~-----~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 179 VPSGLAYGPRSVG-----GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp ECGGGTTTTCCCS-----SSCCTTCCEEEEEEEEEEEC
T ss_pred ECchhccCccCCC-----CCCCCCCeEEEEEEEEEEEc
Confidence 9999999998753 46999999999999999864
No 37
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.79 E-value=7.5e-19 Score=145.73 Aligned_cols=103 Identities=30% Similarity=0.436 Sum_probs=91.3
Q ss_pred chhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEc
Q 036950 167 DKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIE 240 (469)
Q Consensus 167 d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~ 240 (469)
++++.++++++|+|...|. +|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++.|.||
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s-~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ip 83 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSS-VDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIP 83 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEES-TTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEEC
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEec-CCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEEC
Confidence 4679999999999986344 455 8888899999998 66568999999999999999999999999999999999
Q ss_pred CCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 241 PEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 241 ~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
|.++||+.+.. +.|||+++|+|+|+|+++.
T Consensus 84 ~~~ayG~~~~~---~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 84 GPYAYGPRGFP---GLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp GGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred HHHCcCCCCCC---CCcCCCCeEEEEEEEEEeC
Confidence 99999998765 4699999999999999873
No 38
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=154.40 Aligned_cols=108 Identities=28% Similarity=0.492 Sum_probs=89.3
Q ss_pred cccccchhhhhhhhhcCCCCCCCc----eEE-EEEec-CCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEE
Q 036950 162 SDITKDKKVLKKILKEGDGYENQM----MVQ-WFKLH-DGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVA 235 (469)
Q Consensus 162 ~dv~~d~~l~k~il~~G~g~~~p~----~V~-~~~l~-~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~ 235 (469)
.+++.++++.++++++|+|...+. +|+ .+++. +|++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++
T Consensus 20 ~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss-~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~ 98 (134)
T 3b7x_A 20 LDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSN-YFRKTPRLMKLGEDITLWGMELGLLSMRRGELA 98 (134)
T ss_dssp EESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC--------CEEC-CCCCCHHHHHHHHTCEETCEE
T ss_pred ceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEec-CCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEE
Confidence 456678899999999999986555 455 88888 69999997 666789999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 236 LVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 236 ~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
.|+|||++|||+.+.+ +.||||++|+|+|+|+++.
T Consensus 99 ~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 99 RFLFKPNYAYGTLGCP---PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp EEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred EEEECHHHCcCCCCCC---CCcCcCCeEEEEEEEEEEe
Confidence 9999999999998765 4699999999999999885
No 39
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.77 E-value=6.5e-19 Score=144.68 Aligned_cols=101 Identities=32% Similarity=0.552 Sum_probs=88.5
Q ss_pred hhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCC
Q 036950 169 KVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPE 242 (469)
Q Consensus 169 ~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~ 242 (469)
++.++++++|+|...|. +|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++.|.|||.
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s-~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~ 79 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSS-RDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPD 79 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEH-HHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEec-CCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHH
Confidence 36678999999976454 455 8888899999998 5445899999999999999999999999999999999999
Q ss_pred CccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 243 YAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 243 ~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
++||+.+.+ +.|||+++|+|+|+|+++.
T Consensus 80 ~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 80 YAYGATGHP---GIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp GTTTTTCBT---TTBCTTCCEEEEEEEEEEC
T ss_pred HccCCCCCC---CCcCCCCeEEEEEEEEEeC
Confidence 999998765 4699999999999999873
No 40
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.77 E-value=8.3e-19 Score=154.73 Aligned_cols=115 Identities=24% Similarity=0.354 Sum_probs=98.6
Q ss_pred cchhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEE
Q 036950 166 KDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTI 239 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i 239 (469)
.++++.++++++|+|...|. +|+ .|++.||++||++ +.++.|++|.+| .+|+||+.+|.+|++||++.|+|
T Consensus 35 ~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss-~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~~~~~I 111 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSS-RERGKPTTFRPN--EVIKGWTEALQLMREGDRWRLFI 111 (167)
T ss_dssp CTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEH-HHHTSCEEECGG--GSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeec-cccCCCEEEEeC--chhHHHHHHHcCCCCCCEEEEEE
Confidence 46789999999999986354 556 8999999999998 555689999995 89999999999999999999999
Q ss_pred cCCCccCCCCCcccccCCCCCceEEEEEEEeeeeecccccCCChHHHHH
Q 036950 240 EPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKEKESWDMNTQEKIE 288 (469)
Q Consensus 240 ~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~~~~~~l~~~e~~~ 288 (469)
||.+|||+.+.. +.||||++|+|+|+|+++.+. .|.++.+|.-+
T Consensus 112 p~~laYG~~g~~---~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~~ 155 (167)
T 1jvw_A 112 PYDLAYGVTGGG---GMIPPYSPLEFDVELISIKDG--GKGRTAEEVDE 155 (167)
T ss_dssp CGGGTTTTTCSS---SSSCTTCCEEEEEEEEEEGGG--CCSCBHHHHHH
T ss_pred CchhhCCCCCCC---CCcCCCCeEEEEEEEEEEEcC--CCCCCHHHHHH
Confidence 999999998864 479999999999999999853 56677776543
No 41
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.77 E-value=6.8e-19 Score=150.53 Aligned_cols=109 Identities=42% Similarity=0.611 Sum_probs=95.4
Q ss_pred ccc--cchhhhhhhhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcE
Q 036950 163 DIT--KDKKVLKKILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEV 234 (469)
Q Consensus 163 dv~--~d~~l~k~il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~ 234 (469)
|++ .++++.++++++|+|...|. +|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||+
T Consensus 7 dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss-~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~ 85 (135)
T 1r9h_A 7 DITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSS-RDRGDQFSFNLGRGNVIKGWDLGVATMTKGEV 85 (135)
T ss_dssp ECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEH-HHHTSCEEEETTTTSSCHHHHHHHTTCCBTCE
T ss_pred ecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEec-CcCCCCEEEEeCCCCccHHHHHHHhcCCCCCE
Confidence 444 67899999999999975454 455 8888899999997 44468999999999999999999999999999
Q ss_pred EEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeec
Q 036950 235 ALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKE 275 (469)
Q Consensus 235 ~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~ 275 (469)
+.|+|||.+|||+.+.+ +.||++++|+|+|+|++|...
T Consensus 86 ~~v~ip~~~aYG~~g~~---~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 86 AEFTIRSDYGYGDAGSP---PKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp EEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC-
T ss_pred EEEEEChHHcCCCCCCC---CCcCcCCcEEEEEEEEEeecC
Confidence 99999999999998865 479999999999999999753
No 42
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.77 E-value=3.1e-18 Score=157.88 Aligned_cols=101 Identities=32% Similarity=0.578 Sum_probs=93.8
Q ss_pred cCCceEEEEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEEEc
Q 036950 49 KDGGIFKKILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVK 124 (469)
Q Consensus 49 ~d~g~~~~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip 124 (469)
+++|+.|+++++|+| ..|..||.|+|||++++.||++|+++ .|+.|.+ +++++||+++|.+|++|+++.|.||
T Consensus 119 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 195 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIP 195 (224)
T ss_dssp CTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred CCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEEEC
Confidence 678999999999999 79999999999999998899999988 5888887 5899999999999999999999999
Q ss_pred CCccccCCCCCCCCCCCCCCCCceEEEeEeeeee
Q 036950 125 PQYAFGKNGRPATGDEDAVPSNANLHITLEMVSW 158 (469)
Q Consensus 125 ~~~ayg~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 158 (469)
|+++||..+.+ + ||+|++|+|+|+|+++
T Consensus 196 ~~laYG~~g~~-----~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 196 PELAYGKAGVP-----G-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp GGGTTTTTCBT-----T-BCTTCCEEEEEEEEEE
T ss_pred chhhcCcCCCC-----C-CCCCCEEEEEEEEEEe
Confidence 99999998763 3 9999999999999986
No 43
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.76 E-value=2.4e-18 Score=146.00 Aligned_cols=103 Identities=31% Similarity=0.490 Sum_probs=89.8
Q ss_pred cchhhhhh--hhhcCCCCCCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEE
Q 036950 166 KDKKVLKK--ILKEGDGYENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALV 237 (469)
Q Consensus 166 ~d~~l~k~--il~~G~g~~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~ 237 (469)
.++++.++ ++++|+|...|. +|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++.|
T Consensus 20 ~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss-~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v 98 (130)
T 2lgo_A 20 GSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSS-RSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALF 98 (130)
T ss_dssp SSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECT-TTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEE
T ss_pred CCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEcc-CcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 35667666 999999986344 444 8888899999998 66668999999999999999999999999999999
Q ss_pred EEcCCCccCCCCCcccccCCCCCceEEEEEEEeee
Q 036950 238 TIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSF 272 (469)
Q Consensus 238 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~ 272 (469)
.|||.++||+.+.+ +.|||+++|+|+|+|+++
T Consensus 99 ~ip~~~aYG~~~~~---~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 99 TIPYQLAYGERGYP---PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EECTTTSTTTTCCS---TTSCSSCCEEEEEEEEEC
T ss_pred EECcHHHCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 99999999998765 469999999999999875
No 44
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.76 E-value=2.7e-18 Score=146.25 Aligned_cols=103 Identities=33% Similarity=0.510 Sum_probs=90.5
Q ss_pred cchhhhhhhhhcCCCCCCCc----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEc
Q 036950 166 KDKKVLKKILKEGDGYENQM----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIE 240 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~ 240 (469)
.++++.++++++|+|..... +|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++.|.||
T Consensus 26 ~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss-~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ip 104 (133)
T 2y78_A 26 TESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSS-KDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIP 104 (133)
T ss_dssp CTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEET-TTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEecc-CcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEEC
Confidence 46789999999999964333 445 8888899999998 66678999999999999999999999999999999999
Q ss_pred CCCccCCCCCcccccCCCCCceEEEEEEEeee
Q 036950 241 PEYAFGSCSSEKELAIVPANSTLFYEVELVSF 272 (469)
Q Consensus 241 ~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~ 272 (469)
|.++||+.+.. +.|||+++|+|+|+|+++
T Consensus 105 ~~~aYG~~~~~---~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 105 PQLGYGARGAG---GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp GGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred cHHhCCCCCCC---CCCCCCCeEEEEEEEEEC
Confidence 99999998765 469999999999999875
No 45
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.75 E-value=3.6e-18 Score=145.06 Aligned_cols=106 Identities=39% Similarity=0.614 Sum_probs=90.1
Q ss_pred ccchhhhhhhhhcC-CCC-CCCc-----eEE-EEEe-cCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEE
Q 036950 165 TKDKKVLKKILKEG-DGY-ENQM-----MVQ-WFKL-HDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVA 235 (469)
Q Consensus 165 ~~d~~l~k~il~~G-~g~-~~p~-----~V~-~~~l-~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~ 235 (469)
+.++.++++++++| .|. ..|. +|+ .+++ .||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++
T Consensus 13 ~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s-~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~ 91 (129)
T 2vn1_A 13 TADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSS-FDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKC 91 (129)
T ss_dssp STTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEG-GGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEE
T ss_pred CCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEec-CCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEE
Confidence 45566777899977 552 2333 455 8888 799999998 555789999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeee
Q 036950 236 LVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIK 274 (469)
Q Consensus 236 ~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~ 274 (469)
.|+|||.+|||+.+.+ +.||||++|+|+|+|+++.+
T Consensus 92 ~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 92 LVRIESMYGYGDEGCG---ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEChHHcCCCCCCC---CCcCCCCeEEEEEEEEEEec
Confidence 9999999999998764 46999999999999999875
No 46
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.75 E-value=2.1e-17 Score=151.51 Aligned_cols=188 Identities=22% Similarity=0.274 Sum_probs=124.7
Q ss_pred CCCCCCEEEEEEEEEecCCcEEeccccEEEEECCCccchhHHHHHhccc--CCcEEEEEEcCCccccCCCCCCCCCCCCC
Q 036950 66 NPKDLDEVFVKYEVRLEDGTLISKSDGVEFTVGDGYFCAALAKAVKTMK--KGEKVLLTVKPQYAFGKNGRPATGDEDAV 143 (469)
Q Consensus 66 ~~~~gd~V~i~y~~~~~~G~~~~~t~~~~~~ig~~~~~~gle~aL~gmk--~Ge~~~~~ip~~~ayg~~~~~~~~~~~~i 143 (469)
.|..++.+.+... . +|. ...|.+....-+.-|-.+...+. .-.+.+|............+..+ ..
T Consensus 15 ~~~~~~~i~ikv~--~-~~~------~v~~~i~~~~~l~kl~~~y~~~~g~~~~~~~f~fdG~~i~~~~Tpk~L----~~ 81 (209)
T 3uf8_A 15 EVKPETHINLKVS--D-GSS------EIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDL----DM 81 (209)
T ss_dssp ---CCSEEEEEEE--C-SSC------EEEEEEETTSCTHHHHHHHHHHHTCCGGGCEEEETTEECCTTCCTTTT----TC
T ss_pred eeCCCCcEEEEEE--c-CCC------EEEEEEeeCCHHHHHHHHHHHhhCCChheEEEEECCEeccCCCChHHh----hh
Confidence 4556666655553 2 332 23466655544444444433222 23345555544433333222211 12
Q ss_pred CCCceEEEeEeeeeeccccccccchhhhhhhhhcCCCCCCCc----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCcc
Q 036950 144 PSNANLHITLEMVSWKTVSDITKDKKVLKKILKEGDGYENQM----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQV 218 (469)
Q Consensus 144 p~~~~l~~~v~l~~~~~~~dv~~d~~l~k~il~~G~g~~~p~----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v 218 (469)
..++.+..- +...........++++.++++++|+|..... +|+ .+++.||++||++ +.++.|++|.+|.+.+
T Consensus 82 ed~d~I~~~--~eq~Gg~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss-~~~~~P~~f~lG~g~v 158 (209)
T 3uf8_A 82 EDNDIIEAH--REQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSS-KDRNDPFAFVLGGGMV 158 (209)
T ss_dssp CTTEEEEEE--CSCTTCCCCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEES-GGGTCCEEEETTSSSS
T ss_pred cccccchhh--ccccccccccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEc-cccCCCEEEEeCCCcc
Confidence 234444322 2222222233457899999999999975333 455 8899999999998 6668899999999999
Q ss_pred chhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeee
Q 036950 219 IDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSF 272 (469)
Q Consensus 219 ~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~ 272 (469)
++||+.+|.+|++||++.|+|||.+|||+.+.. +.|||+++|+|+|+|+++
T Consensus 159 i~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~---~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 159 IKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAA---GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp CHHHHHHHTTCBTTCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred chhHHHHHhCCCCCCEEEEEECcHHhCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 999999999999999999999999999998875 469999999999999975
No 47
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.75 E-value=3.8e-18 Score=144.13 Aligned_cols=106 Identities=22% Similarity=0.350 Sum_probs=91.2
Q ss_pred ccchhhhhhhhhcCCCC-CCCc-----eEE-EEEec-CCcEEEecCCC--CCCcEEEEcCCCccchhHHHHHhccccCcE
Q 036950 165 TKDKKVLKKILKEGDGY-ENQM-----MVQ-WFKLH-DGTVFVKKGHD--EEPLFEFKIDEEQVIDGLDRAVKTMKKGEV 234 (469)
Q Consensus 165 ~~d~~l~k~il~~G~g~-~~p~-----~V~-~~~l~-~g~~~d~~~~~--~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~ 234 (469)
..++++.++++++|.+. ..+. +|+ .++++ ||++||++ +. .+.|++|.+|.+.+++||+.+|.+|++||+
T Consensus 9 ~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss-~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 9 IPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHST-HKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp CCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEH-HHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCE
T ss_pred ECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEc-ccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCE
Confidence 45678999999999832 2333 455 89998 99999998 42 468999999999999999999999999999
Q ss_pred EEEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeeeec
Q 036950 235 ALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFIKE 275 (469)
Q Consensus 235 ~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~~ 275 (469)
+.|.|||.+|||+.+.. .|||+++|+|+|+|+++.+.
T Consensus 88 ~~~~ip~~~aYG~~g~~----~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 88 RKLIIPPALGYGKEGKG----KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp EEEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEECC
T ss_pred EEEEEChHHhcCCCCCC----CCCCCCeEEEEEEEEEEEcC
Confidence 99999999999998753 69999999999999999764
No 48
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.75 E-value=5.6e-18 Score=137.77 Aligned_cols=92 Identities=25% Similarity=0.446 Sum_probs=85.2
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCC
Q 036950 65 ENPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDE 140 (469)
Q Consensus 65 ~~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~ 140 (469)
..++.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++.|.|||+++||+.+.+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~----- 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP----- 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT-----
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC-----
Confidence 57899999999999998899999987 689999999999999999999999999999999999999998764
Q ss_pred CCCCCCceEEEeEeeeeeccc
Q 036950 141 DAVPSNANLHITLEMVSWKTV 161 (469)
Q Consensus 141 ~~ip~~~~l~~~v~l~~~~~~ 161 (469)
+.||++++++|+|+|+++...
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGGG
T ss_pred CCcCcCCeEEEEEEEEEeccc
Confidence 469999999999999998763
No 49
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.73 E-value=1.1e-17 Score=153.05 Aligned_cols=99 Identities=24% Similarity=0.389 Sum_probs=88.7
Q ss_pred cchhhhhhhhhcCCCCCCCc----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEc
Q 036950 166 KDKKVLKKILKEGDGYENQM----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIE 240 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~ 240 (469)
.++++.++++++|+|..... +|+ .|++.||++||++ +.|++|.+| .+|+||+.+|.+|++|+++.|+||
T Consensus 115 ~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss----~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP 188 (219)
T 3oe2_A 115 LADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS----TQPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP 188 (219)
T ss_dssp CGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC----SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc----CCcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence 47889999999999964322 455 8999999999997 789999998 899999999999999999999999
Q ss_pred CCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 241 PEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 241 ~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
|.+|||+.+.. +.|||+++|+|+|+|+++.
T Consensus 189 p~lAYG~~g~~---~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 189 SDQAYGAEGAG---DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred chhcCCCCCCC---CCCCCCCeEEEEEEEEEEe
Confidence 99999998875 3699999999999999986
No 50
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.73 E-value=1.2e-17 Score=139.48 Aligned_cols=103 Identities=29% Similarity=0.443 Sum_probs=90.0
Q ss_pred ccccchhhhhhhhhcCCCCC-CCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEE
Q 036950 163 DITKDKKVLKKILKEGDGYE-NQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVA 235 (469)
Q Consensus 163 dv~~d~~l~k~il~~G~g~~-~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~ 235 (469)
+++.++++.++++++|+|.. .|. +|+ .+++.||++|+++ .|++|.+|.+.+++||+.+|.+|++||++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~-----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 82 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETA 82 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE-----EEEEEETTSSCSCHHHHHHGGGSCTTCEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC-----CCEEEEECCCChhHHHHHHHhCCCCCCEE
Confidence 45566679999999999962 343 455 8888899999984 79999999999999999999999999999
Q ss_pred EEEEcCCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 236 LVTIEPEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 236 ~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
.|.|||++|||+.+.+ +.|||+++|+|+|+|+++.
T Consensus 83 ~~~ip~~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 83 MVTADSKYCYGPQGRS---PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred EEEEChHHccCCCCCC---CccCCCCeEEEEEEEEEec
Confidence 9999999999998765 4699999999999999885
No 51
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.73 E-value=1.3e-17 Score=145.52 Aligned_cols=105 Identities=28% Similarity=0.416 Sum_probs=90.2
Q ss_pred cccchhhhhhhhhcCCCC-CCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEE
Q 036950 164 ITKDKKVLKKILKEGDGY-ENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVAL 236 (469)
Q Consensus 164 v~~d~~l~k~il~~G~g~-~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~ 236 (469)
++.++.+.++++++|+|. ..|. +|+ .+++.||++||++ .|++|.+|.+.+++||+.+|.+|++||++.
T Consensus 39 ~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~-----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 39 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp SSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE-----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred ECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC-----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 344444589999999996 2343 455 8898999999984 799999999999999999999999999999
Q ss_pred EEEcCCCccCCCC-CcccccCCCCCceEEEEEEEeeeeecc
Q 036950 237 VTIEPEYAFGSCS-SEKELAIVPANSTLFYEVELVSFIKEK 276 (469)
Q Consensus 237 ~~i~~~~~yg~~~-~~~~~~~ip~~~~l~f~vel~~~~~~~ 276 (469)
|+||++++||+.+ .. +.|||+++|+|+|+|+++.+..
T Consensus 114 v~IP~~~aYG~~g~~~---~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 114 VTADSKYCYGPQGSRS---PYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEECGGGTTTTTCCSS---SCCCTTCCEEEEEEEEEEEECS
T ss_pred EEECchhcCCcccccC---CCcCCCCeEEEEEEEEEEEccc
Confidence 9999999999988 43 4699999999999999998754
No 52
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=8.8e-18 Score=143.61 Aligned_cols=113 Identities=27% Similarity=0.389 Sum_probs=95.9
Q ss_pred ccccchhhhhhhhhcCCCC-CCCc-----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEE
Q 036950 163 DITKDKKVLKKILKEGDGY-ENQM-----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVA 235 (469)
Q Consensus 163 dv~~d~~l~k~il~~G~g~-~~p~-----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~ 235 (469)
+++.++++.++++++|+|. ..|. +|+ .+++.||++||+ ..|++|.+|.+.+++||+.+|.+|++||++
T Consensus 12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds-----~~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~ 86 (135)
T 2d9f_A 12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE-----EPELVFTLGDCDVIQALDLSVPLMDVGETA 86 (135)
T ss_dssp ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE-----EEEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec-----CCCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 4455666999999999996 2333 455 888889999997 379999999999999999999999999999
Q ss_pred EEEEcCCCccCCCC-CcccccCCCCCceEEEEEEEeeeeecccccCCCh
Q 036950 236 LVTIEPEYAFGSCS-SEKELAIVPANSTLFYEVELVSFIKEKESWDMNT 283 (469)
Q Consensus 236 ~~~i~~~~~yg~~~-~~~~~~~ip~~~~l~f~vel~~~~~~~~~~~l~~ 283 (469)
.|.|||+++||+.+ .. +.|||+++|+|+|+|+++...++...++.
T Consensus 87 ~v~ip~~~aYG~~~~~~---~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 87 MVTADSKYCYGPQGSRS---PYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp EEEECHHHHTCTTCCSS---SCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred EEEEChhHccCcCCcCC---CccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 99999999999987 43 47999999999999999998766555443
No 53
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.70 E-value=2e-17 Score=145.30 Aligned_cols=132 Identities=23% Similarity=0.329 Sum_probs=108.9
Q ss_pred hHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC---CCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHH
Q 036950 283 TQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYD---SSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAE 359 (469)
Q Consensus 283 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~---~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai 359 (469)
.+++++.+..+++.|+.+|+.|+|..|+..|++|+.+++.. ....++++....+....+|+|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 46788999999999999999999999999999999986532 123345666778888999999999999999999999
Q ss_pred HHHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036950 360 KLCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNI 416 (469)
Q Consensus 360 ~~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~m 416 (469)
.+|++||+++ +.+|+++++++|+|.. .++..+..++.+++++.++++++|++|
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~----~~~~~l~~~~~~~~~~~~~~k~~~~~~ 159 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAAS----VVAREMKIVTERRAEKKADSRVTYSKM 159 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHH----HHHHHHHHHHHHHHHHTTSSCC-----
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998 7889999999999972 578999999999999999999999999
Q ss_pred hh
Q 036950 417 FA 418 (469)
Q Consensus 417 f~ 418 (469)
|+
T Consensus 160 f~ 161 (162)
T 3rkv_A 160 FQ 161 (162)
T ss_dssp --
T ss_pred cC
Confidence 96
No 54
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.70 E-value=1.6e-17 Score=140.90 Aligned_cols=106 Identities=24% Similarity=0.329 Sum_probs=90.0
Q ss_pred cchhhhhhhhhcCCCCCCCc----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhc------cccCcE
Q 036950 166 KDKKVLKKILKEGDGYENQM----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKT------MKKGEV 234 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~------m~~Ge~ 234 (469)
.++++.++++++|+|..... +|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+ |++||+
T Consensus 10 ~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss-~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge~ 88 (129)
T 1u79_A 10 SPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSS-YNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGK 88 (129)
T ss_dssp CTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEH-HHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTCE
T ss_pred CCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEec-CCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCCE
Confidence 35689999999999974333 455 8888899999998 55568999999999999999999998 999999
Q ss_pred EEEEEcCCCccCCCCCcc--cccCCCCCceEEEEEEEeee
Q 036950 235 ALVTIEPEYAFGSCSSEK--ELAIVPANSTLFYEVELVSF 272 (469)
Q Consensus 235 ~~~~i~~~~~yg~~~~~~--~~~~ip~~~~l~f~vel~~~ 272 (469)
+.|.|||.++||+.+... ..+.||||++|+|+|+|+++
T Consensus 89 ~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 89 RTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999987531 01369999999999999976
No 55
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.70 E-value=3e-17 Score=150.26 Aligned_cols=103 Identities=26% Similarity=0.379 Sum_probs=90.3
Q ss_pred cchhhhhhhhhcCCCCCCCc----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEc
Q 036950 166 KDKKVLKKILKEGDGYENQM----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIE 240 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~ 240 (469)
.++++.++++++|+|..... +|+ .|++.||++||++ +.++.|++|.+| .+|+||+.+|.+|++|+++.|+||
T Consensus 104 ~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss-~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~IP 180 (213)
T 1fd9_A 104 LPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDST-EKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEIYVP 180 (213)
T ss_dssp CTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEH-HHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeec-cccCCCEEEEcC--chhhHHHHHHcCCCCCCEEEEEEC
Confidence 46789999999999964322 455 8999999999998 555789999995 899999999999999999999999
Q ss_pred CCCccCCCCCcccccCCCCCceEEEEEEEeeeee
Q 036950 241 PEYAFGSCSSEKELAIVPANSTLFYEVELVSFIK 274 (469)
Q Consensus 241 ~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~~ 274 (469)
|.++||+.+.. +.|||+++|+|+|+|+++.+
T Consensus 181 ~~laYG~~g~~---~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 181 SGLAYGPRSVG---GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp GGGTTTTCCCS---SSCCTTCCEEEEEEEEEEEC
T ss_pred chhccCccCCC---CCCCCCCeEEEEEEEEEEEc
Confidence 99999998764 46999999999999999874
No 56
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.67 E-value=1.2e-16 Score=147.36 Aligned_cols=101 Identities=29% Similarity=0.467 Sum_probs=88.5
Q ss_pred cchhhhhhhhhcCCCCCCCc----eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEc
Q 036950 166 KDKKVLKKILKEGDGYENQM----MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIE 240 (469)
Q Consensus 166 ~d~~l~k~il~~G~g~~~p~----~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~ 240 (469)
.++++.++++++|+|..... +|+ .|++.||++||++ +.++.|++|.+| .+|+||+.+|.+|++||++.|+||
T Consensus 119 ~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss-~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~IP 195 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNS-YTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIP 195 (224)
T ss_dssp CTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEG-GGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred CCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeec-cccCCCEEEEcC--CcchhHHHHHcCCCCCCEEEEEEC
Confidence 35789999999999974332 455 8999999999998 666789999995 899999999999999999999999
Q ss_pred CCCccCCCCCcccccCCCCCceEEEEEEEeeee
Q 036950 241 PEYAFGSCSSEKELAIVPANSTLFYEVELVSFI 273 (469)
Q Consensus 241 ~~~~yg~~~~~~~~~~ip~~~~l~f~vel~~~~ 273 (469)
|+++||+.+.+ .||||++|+|+|+|+++.
T Consensus 196 ~~laYG~~g~~----~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 196 PELAYGKAGVP----GIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp GGGTTTTTCBT----TBCTTCCEEEEEEEEEEC
T ss_pred chhhcCcCCCC----CCCCCCEEEEEEEEEEeC
Confidence 99999998764 399999999999999873
No 57
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.66 E-value=2.3e-16 Score=128.15 Aligned_cols=86 Identities=30% Similarity=0.465 Sum_probs=77.7
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEE
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLF 264 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~ 264 (469)
+|+ .+++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++.|.|||++|||+.+.. +.||++++|+
T Consensus 13 ~v~y~~~~~dG~~~d~s-~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~---~~Ip~~~~l~ 88 (102)
T 2pbc_A 13 HMHYTGKLEDGTEFDSS-LPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP---PKIPGGATLV 88 (102)
T ss_dssp EEEEEEECTTSCEEEES-TTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT---TTBCTTCCEE
T ss_pred EEEEEEEECCCCEEEeC-CCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC---CCcCcCCeEE
Confidence 455 7888899999998 6667899999999999999999999999999999999999999998764 4699999999
Q ss_pred EEEEEeeeeec
Q 036950 265 YEVELVSFIKE 275 (469)
Q Consensus 265 f~vel~~~~~~ 275 (469)
|+|+|+++.+.
T Consensus 89 f~v~l~~v~~~ 99 (102)
T 2pbc_A 89 FEVELLKIERR 99 (102)
T ss_dssp EEEEEEEEGGG
T ss_pred EEEEEEEeccc
Confidence 99999998754
No 58
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.62 E-value=7.6e-15 Score=133.14 Aligned_cols=159 Identities=32% Similarity=0.456 Sum_probs=116.1
Q ss_pred eEEEEEEEeeeeecccccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHH-HHHHHHHHHHH
Q 036950 262 TLFYEVELVSFIKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDE-EKQQAKVLKIT 340 (469)
Q Consensus 262 ~l~f~vel~~~~~~~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e-~~~~~~~l~~~ 340 (469)
.......+..+.+.++.|+|+.+++...+..++..|+.+|+.|+|.+|+..|.+++.+.+..+..... .......+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp ------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence 34445566778899999999999999999999999999999999999999999999998876543322 23334556678
Q ss_pred hHhHHHHHHHHhhCHHHHHHHHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHH
Q 036950 341 CNLNNAACKLKLKEYKQAEKLCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKL 397 (469)
Q Consensus 341 ~~~N~a~~~~kl~~~~~ai~~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~ 397 (469)
++.|+|.||+++++|++|+.+|+++|+++ +..|+++++++|++. .+...+..
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~l~~ 164 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL-----DIRNSYEL 164 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH-----HHHHHHHH
Confidence 99999999999999999999999999998 678999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhchh
Q 036950 398 LKEKVREYNKKDVQFYGNIFAKINKLEQ 425 (469)
Q Consensus 398 ~~~~~~~~~~~e~~~~~~mf~~~~~~~~ 425 (469)
+...+.+..+.+++.|++||++.....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 192 (198)
T 2fbn_A 165 CVNKLKEARKKDKLTFGGMFDKGPLYEE 192 (198)
T ss_dssp HHHHHHHHHC------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhc
Confidence 9999999999999999999998665543
No 59
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.55 E-value=9.4e-15 Score=120.38 Aligned_cols=83 Identities=12% Similarity=0.201 Sum_probs=73.3
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCC
Q 036950 65 ENPKDLDEVFVKYEVRLEDGTLISKS--DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDA 142 (469)
Q Consensus 65 ~~~~~gd~V~i~y~~~~~~G~~~~~t--~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ 142 (469)
..++.||.|+++|++++ ||++|+++ .|+.|.+|.+++++||+++|.||++|+++.|.||+...||..+.
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~-------- 98 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL-------- 98 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTCCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG--------
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCCccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC--------
Confidence 57899999999999998 99999988 89999999999999999999999999999999973333887543
Q ss_pred CCCCceEEEeEeeeee
Q 036950 143 VPSNANLHITLEMVSW 158 (469)
Q Consensus 143 ip~~~~l~~~v~l~~~ 158 (469)
++++++|+|+|+++
T Consensus 99 --~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 --QSKPVTFEVVLKAI 112 (113)
T ss_dssp --GSCCCEEEEEECCB
T ss_pred --CCCEEEEEEEEEEE
Confidence 57899999999876
No 60
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.54 E-value=2.5e-14 Score=126.32 Aligned_cols=71 Identities=25% Similarity=0.386 Sum_probs=66.1
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc---ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCC
Q 036950 67 PKDLDEVFVKYEVRLEDGTLISKS---DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPAT 137 (469)
Q Consensus 67 ~~~gd~V~i~y~~~~~~G~~~~~t---~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~ 137 (469)
++.||.|+++|++++.+|++|++| +|+.|.+|.+++++||+++|.||++|+++.|.|||+.|||+.+...+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~~~v 76 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLV 76 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCTTSE
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCChhhE
Confidence 678999999999998899999988 69999999999999999999999999999999999999999866543
No 61
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.50 E-value=2.4e-14 Score=131.82 Aligned_cols=70 Identities=26% Similarity=0.399 Sum_probs=65.0
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc-----------------ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccc
Q 036950 67 PKDLDEVFVKYEVRLEDGTLISKS-----------------DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAF 129 (469)
Q Consensus 67 ~~~gd~V~i~y~~~~~~G~~~~~t-----------------~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ay 129 (469)
++.||.|++||++++ ||++|++| .|+.|.+|.|++++||+++|.||++|+++.|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999987 289999999999999999999999999999999999999
Q ss_pred cCCCCCCC
Q 036950 130 GKNGRPAT 137 (469)
Q Consensus 130 g~~~~~~~ 137 (469)
|+++...+
T Consensus 81 Ge~~~~lv 88 (231)
T 3prb_A 81 GKRDPSKI 88 (231)
T ss_dssp CCCCGGGE
T ss_pred CCCChHHE
Confidence 99876544
No 62
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.50 E-value=9.9e-14 Score=120.80 Aligned_cols=120 Identities=15% Similarity=0.159 Sum_probs=99.2
Q ss_pred CChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHH
Q 036950 281 MNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEK 360 (469)
Q Consensus 281 l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~ 360 (469)
|.+=.....|..+++.||.+|+.|+|++|+.+|++||.+.+..+... .....+....+|+|+|.|+.++|+|++|+.
T Consensus 2 ~~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~ 78 (159)
T 2hr2_A 2 MKPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALH 78 (159)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHH
Confidence 33333467899999999999999999999999999999998743321 001233445699999999999999999999
Q ss_pred HHHHHHhh-------c---------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 036950 361 LCSKVLEL-------D---------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 361 ~~~~al~~-------d---------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
+|++||++ + +.+|++|++++|++. .+.+++..+++++++..
T Consensus 79 ~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~-----~~~~~~~~~~~~~~~~~ 153 (159)
T 2hr2_A 79 SADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK-----GETPGKERMMEVAIDRI 153 (159)
T ss_dssp HHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC-----SCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHHHH
Confidence 99999999 5 678999999999999 89999999998887766
Q ss_pred HH
Q 036950 407 KK 408 (469)
Q Consensus 407 ~~ 408 (469)
++
T Consensus 154 ~k 155 (159)
T 2hr2_A 154 AQ 155 (159)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 63
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.49 E-value=9e-14 Score=125.21 Aligned_cols=72 Identities=25% Similarity=0.376 Sum_probs=67.5
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc---ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCC
Q 036950 67 PKDLDEVFVKYEVRLEDGTLISKS---DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATG 138 (469)
Q Consensus 67 ~~~gd~V~i~y~~~~~~G~~~~~t---~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~ 138 (469)
++.||.|+++|++++.+|++|++| +|+.|.+|.++++|+|+++|.+|++|+++.|.|||+.|||+++...+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~~lV~ 77 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQ 77 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCTTTCE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCChhhEE
Confidence 678999999999998899999988 699999999999999999999999999999999999999998876654
No 64
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.48 E-value=2.5e-13 Score=114.38 Aligned_cols=91 Identities=33% Similarity=0.485 Sum_probs=84.1
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
+.|+.++++||.+|+.|+|++|+..|++||...+.+ ..+|.|+|.||+++|+|++|+.+|++||+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN---------------AILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 357888999999999999999999999999988765 77899999999999999999999999999
Q ss_pred hc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHH
Q 036950 368 LD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLL 398 (469)
Q Consensus 368 ~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~ 398 (469)
++ +.+|+++++++|+|. +++..|..+
T Consensus 76 ~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~-----~a~~~l~~~ 124 (126)
T 4gco_A 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNE-----EAREGVRNC 124 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCH-----HHHHHHHHh
Confidence 98 789999999999999 888887765
No 65
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.48 E-value=1.3e-13 Score=119.71 Aligned_cols=72 Identities=24% Similarity=0.374 Sum_probs=67.1
Q ss_pred CCCCCCCEEEEEEEEEec-CCcEEecc---ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCC
Q 036950 65 ENPKDLDEVFVKYEVRLE-DGTLISKS---DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPA 136 (469)
Q Consensus 65 ~~~~~gd~V~i~y~~~~~-~G~~~~~t---~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~ 136 (469)
..++.||.|++||++++. +|++|++| .|+.|.+|.+++++||+++|.||++|+++.|.|||+.|||+.+...
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~~~ 80 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYESSY 80 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCSCE
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCcce
Confidence 468899999999999987 99999988 6999999999999999999999999999999999999999987643
No 66
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.46 E-value=4.7e-14 Score=123.91 Aligned_cols=69 Identities=25% Similarity=0.482 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEEEEEecCCcEEecc----ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCC
Q 036950 66 NPKDLDEVFVKYEVRLEDGTLISKS----DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGR 134 (469)
Q Consensus 66 ~~~~gd~V~i~y~~~~~~G~~~~~t----~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~ 134 (469)
.++.||.|++||++++.||++|++| +|+.|.+|.+++++||+++|.+|++|+++.|.|||++|||+++.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 5899999999999999999999987 69999999999999999999999999999999999999998765
No 67
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.46 E-value=2.2e-13 Score=136.56 Aligned_cols=132 Identities=29% Similarity=0.539 Sum_probs=112.5
Q ss_pred ChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHH
Q 036950 282 NTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDS-SFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEK 360 (469)
Q Consensus 282 ~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~-~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~ 360 (469)
+.++.++.+..++..|+.+|+.|+|++|+..|++|+.+++..+ ....++..........+|+|+|.||+++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 5788999999999999999999999999999999999765421 112233344677788999999999999999999999
Q ss_pred HHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036950 361 LCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIF 417 (469)
Q Consensus 361 ~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf 417 (469)
+|++||+++ +.+|++|++++|++. .+...+..+...++++.+++++.|++||
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~-----~~~~~l~~~~~~~~~~~~a~k~~~~kmf 369 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK-----AIQAELLKVKQKIKAQKDKEKAAYAKMF 369 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHHHHHHHHHCCC----
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998 778999999999999 9999999999999999999999999998
Q ss_pred h
Q 036950 418 A 418 (469)
Q Consensus 418 ~ 418 (469)
+
T Consensus 370 ~ 370 (370)
T 1ihg_A 370 A 370 (370)
T ss_dssp -
T ss_pred C
Confidence 4
No 68
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.41 E-value=4.6e-13 Score=116.41 Aligned_cols=67 Identities=27% Similarity=0.420 Sum_probs=63.3
Q ss_pred CCCCCEEEEEEEEEecCCcEEecc-----------------ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccc
Q 036950 67 PKDLDEVFVKYEVRLEDGTLISKS-----------------DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAF 129 (469)
Q Consensus 67 ~~~gd~V~i~y~~~~~~G~~~~~t-----------------~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ay 129 (469)
++.||.|++||++++ +|++|++| .|+.|.+|.+++++||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 678999999999999 99999987 289999999999999999999999999999999999999
Q ss_pred cCCCC
Q 036950 130 GKNGR 134 (469)
Q Consensus 130 g~~~~ 134 (469)
|+++.
T Consensus 81 G~~~~ 85 (157)
T 3pr9_A 81 GKRDP 85 (157)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 98765
No 69
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.39 E-value=7e-13 Score=115.59 Aligned_cols=68 Identities=16% Similarity=0.351 Sum_probs=63.6
Q ss_pred CCCCCEEEEEEEEEecCCcEEeccccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCC
Q 036950 67 PKDLDEVFVKYEVRLEDGTLISKSDGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPA 136 (469)
Q Consensus 67 ~~~gd~V~i~y~~~~~~G~~~~~t~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~ 136 (469)
++.||.|++||+++ .+|++|++|. +.|.+|.+++++||+++|.||++|+++.|.|||+.|||+.+...
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~~l 70 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEG 70 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCGGG
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCcce
Confidence 67899999999999 8999999887 99999999999999999999999999999999999999886543
No 70
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.36 E-value=9.3e-13 Score=115.61 Aligned_cols=64 Identities=27% Similarity=0.474 Sum_probs=57.8
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCC
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSS 250 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~ 250 (469)
+|+ ++++.||++||++ +.++.|++|.+|.+.+++||+.+|.+|++||++.|.|||++|||+.+.
T Consensus 32 ~v~Y~g~l~dG~vfDss-~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 32 LVHFTLKLDDGTTAEST-RNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp EEEEEEEETTSCEEEEH-HHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEEECCCCEEEec-CCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 455 8888999999998 555689999999999999999999999999999999999999998643
No 71
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.35 E-value=4.6e-12 Score=106.60 Aligned_cols=69 Identities=28% Similarity=0.444 Sum_probs=63.5
Q ss_pred HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHH
Q 036950 286 KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKV 365 (469)
Q Consensus 286 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~a 365 (469)
..+.|..+++.||.+|+.|+|++|+..|++||.+.|.. ..+|+|+|.||+++|+|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~---------------~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN---------------ITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44678889999999999999999999999999987765 678999999999999999999999999
Q ss_pred Hhhc
Q 036950 366 LELD 369 (469)
Q Consensus 366 l~~d 369 (469)
|+++
T Consensus 69 l~~~ 72 (127)
T 4gcn_A 69 VEVG 72 (127)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 9876
No 72
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.35 E-value=6e-13 Score=115.40 Aligned_cols=69 Identities=25% Similarity=0.437 Sum_probs=64.3
Q ss_pred CCCCCCEEEEEEEEEecCCcEEecc-----------------ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCcc
Q 036950 66 NPKDLDEVFVKYEVRLEDGTLISKS-----------------DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYA 128 (469)
Q Consensus 66 ~~~~gd~V~i~y~~~~~~G~~~~~t-----------------~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~a 128 (469)
.++.||.|++||++++.+|++|++| .|+.|.+|.+++++||+++|.||++|+++.|.|||+.|
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 3678999999999998899999987 48999999999999999999999999999999999999
Q ss_pred ccCCCC
Q 036950 129 FGKNGR 134 (469)
Q Consensus 129 yg~~~~ 134 (469)
||+++.
T Consensus 81 YG~~~~ 86 (151)
T 1ix5_A 81 YGNRNE 86 (151)
T ss_dssp SCSCCS
T ss_pred CCCCCc
Confidence 998765
No 73
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.30 E-value=3.7e-12 Score=110.67 Aligned_cols=64 Identities=31% Similarity=0.389 Sum_probs=56.6
Q ss_pred eEE-EEEecCCcEEEecCCCC-------------CCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCc
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDE-------------EPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSE 251 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~-------------~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~ 251 (469)
+|+ ++++ ||++||+| +.+ ..|++|.+|.+++++||+.+|.+|++||+..|.|||.+|||+.+..
T Consensus 9 ~v~Y~g~l-dG~vfDss-~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~~ 86 (157)
T 3pr9_A 9 KISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPS 86 (157)
T ss_dssp EEEEEEEE-TTEEEEES-CHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTTCCCCGG
T ss_pred EEEEEEEE-CCEEEEec-cccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhcCCCChH
Confidence 455 8899 99999998 431 3799999999999999999999999999999999999999987653
No 74
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.24 E-value=3.1e-11 Score=104.59 Aligned_cols=63 Identities=30% Similarity=0.446 Sum_probs=56.6
Q ss_pred eEE-EEEec-CCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCC
Q 036950 186 MVQ-WFKLH-DGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSS 250 (469)
Q Consensus 186 ~V~-~~~l~-~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~ 250 (469)
+|+ .+++. +|++||++ +. ..|++|.+|.++++|||+.+|.+|++|+++.|.|||.+|||+.+.
T Consensus 14 ~v~Y~g~~~~dG~~fdss-~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 14 LIEYEVREQGSSIVLDSN-IS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp EEEEEEEESSCSCEEEES-TT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred EEEEEEEECCCCCEEEeC-CC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 455 88887 99999998 43 579999999999999999999999999999999999999998654
No 75
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.22 E-value=2.3e-11 Score=112.00 Aligned_cols=63 Identities=32% Similarity=0.394 Sum_probs=56.1
Q ss_pred eEE-EEEecCCcEEEecCCCC-------------CCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCC
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDE-------------EPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSS 250 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~-------------~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~ 250 (469)
+|+ +|++ ||++||+| +.+ +.|++|.+|.++++|||+.+|.+|++|++..|.|||.+|||+.+.
T Consensus 9 ~v~Y~g~l-dG~vfDss-~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AYGe~~~ 85 (231)
T 3prb_A 9 KISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (231)
T ss_dssp EEEEEEEE-TTEEEEES-CHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEEE-CCEEEEec-cchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 455 8899 99999998 431 379999999999999999999999999999999999999998653
No 76
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.21 E-value=4.6e-11 Score=121.42 Aligned_cols=98 Identities=12% Similarity=0.203 Sum_probs=83.6
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCC
Q 036950 65 ENPKDLDEVFVKYEVRLEDGTLISKS--DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDA 142 (469)
Q Consensus 65 ~~~~~gd~V~i~y~~~~~~G~~~~~t--~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ 142 (469)
..+..||.|++||+++. ||+.|+++ .|+.|.+|.|+++|||+++|.||++|+++.|.+|+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-------- 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-------- 226 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCCCSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT--------
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCCccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC--------
Confidence 56899999999999995 99999987 89999999999999999999999999999999999999997543
Q ss_pred CCCCceEEEeEeeeeeccccccccchhhhhh
Q 036950 143 VPSNANLHITLEMVSWKTVSDITKDKKVLKK 173 (469)
Q Consensus 143 ip~~~~l~~~v~l~~~~~~~dv~~d~~l~k~ 173 (469)
+|.++.|.|+|+++....-..-|..+.+.
T Consensus 227 --ag~~~~F~V~v~~v~~~~lpeldDEfak~ 255 (432)
T 1w26_A 227 --KGKAAKFAINLKKVEERELPELTAEFIKR 255 (432)
T ss_dssp --SSCEEEEEEECCEECCEECCCCSHHHHTT
T ss_pred --CCceEEEEEEEEEEeccCCCCcchHHHHH
Confidence 57899999999998764333334455543
No 77
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.20 E-value=1.9e-11 Score=100.58 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=63.4
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEc-CCCccCCCCCcccccCCCCCceE
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIE-PEYAFGSCSSEKELAIVPANSTL 263 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~-~~~~yg~~~~~~~~~~ip~~~~l 263 (469)
+|+ .+++ ||++||++. +.|++|.+|.++++|||+.+|.+|++||+..|.|+ |.. ||..+ .+++++
T Consensus 37 ~v~Y~g~~-dG~~fdss~---~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~--------~~g~~l 103 (113)
T 1hxv_A 37 IIDFTGIV-DNKKLASAS---AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKE--------LQSKPV 103 (113)
T ss_dssp EEEEEEEE-TTEECSTTC---CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSG--------GGSCCC
T ss_pred EEEEEEEE-CCEEcccCC---ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCC--------CCCCEE
Confidence 444 7887 999999872 68999999999999999999999999999999996 444 88653 246899
Q ss_pred EEEEEEeee
Q 036950 264 FYEVELVSF 272 (469)
Q Consensus 264 ~f~vel~~~ 272 (469)
+|+|+|+++
T Consensus 104 ~F~V~l~~V 112 (113)
T 1hxv_A 104 TFEVVLKAI 112 (113)
T ss_dssp EEEEEECCB
T ss_pred EEEEEEEEE
Confidence 999999976
No 78
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.20 E-value=1.6e-10 Score=101.85 Aligned_cols=62 Identities=16% Similarity=0.285 Sum_probs=55.6
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCC
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCS 249 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~ 249 (469)
+|+ ++++.+|++||++ +. ..|++|.+|.++++|||+.+|.+|++|+++.|.|||..|||+.+
T Consensus 10 ~v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 10 SLAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp EEEEEEEETTSCEEEEC-CS-SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred EEEEEEEECCCCEEeec-cC-CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 344 7888899999998 43 47999999999999999999999999999999999999999874
No 79
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.20 E-value=1.5e-11 Score=106.58 Aligned_cols=65 Identities=34% Similarity=0.456 Sum_probs=57.0
Q ss_pred eEE-EEEecCCcEEEecCCC-------------CCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCc
Q 036950 186 MVQ-WFKLHDGTVFVKKGHD-------------EEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSE 251 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~-------------~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~ 251 (469)
+|+ ++++.+|++||+| +. ...|++|.+|.+.+++||+.+|.+|++||+..|.|||++|||+.+..
T Consensus 9 ~v~Y~g~~~dG~~fdss-~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~~ 87 (151)
T 1ix5_A 9 KVDYIGKLESGDVFDTS-IEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNEM 87 (151)
T ss_dssp EECCEECCTTSCCCEES-CHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSSCSCCST
T ss_pred EEEEEEEECCCCEEEec-chhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHCCCCCcc
Confidence 344 8888899999998 42 24799999999999999999999999999999999999999986543
No 80
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.17 E-value=6.3e-11 Score=106.59 Aligned_cols=63 Identities=16% Similarity=0.282 Sum_probs=56.0
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCC
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSS 250 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~ 250 (469)
+|+ ++++.+|++||++ +. ..|++|.+|.++++|||+.+|.+|++|++..|.|||.+|||+.+.
T Consensus 10 ~v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 10 SLAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp EEEEEEEETTTEEEEEC-CT-TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred EEEEEEEECCCCEEEec-CC-CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 344 7788899999998 43 489999999999999999999999999999999999999998643
No 81
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.5e-10 Score=96.35 Aligned_cols=94 Identities=22% Similarity=0.256 Sum_probs=84.3
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+.+.|+.+++.|+|.+|+..|++++...+.+ ..+|.|+|.||+++|+|++|+.++++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999988765 678999999999999999999999999999
Q ss_pred c-----------------------HHHHHHHHhhC------CCCCCcchHHHHHHHHHHHHHH
Q 036950 369 D-----------------------KLDIKKALEID------PDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~------p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+ +..|+++++++ |++. .+...+..+..++
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~-----~~~~~l~~~~~~l 125 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR-----EIDQLYYKASQQR 125 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH-----HHHHHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHH-----HHHHHHHHHHHhh
Confidence 8 67889999999 8888 8888888776653
No 82
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.10 E-value=1.1e-10 Score=117.01 Aligned_cols=98 Identities=9% Similarity=0.184 Sum_probs=81.4
Q ss_pred CCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCC
Q 036950 65 ENPKDLDEVFVKYEVRLEDGTLISKS--DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDA 142 (469)
Q Consensus 65 ~~~~~gd~V~i~y~~~~~~G~~~~~t--~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~ 142 (469)
..++.||.|++||+++. ||+.|+++ .|+.|.+|.|+++|||+++|.||++|+++.|.|++...||..+.
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-------- 229 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-------- 229 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCEEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT--------
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCCccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC--------
Confidence 46899999999999994 99999987 89999999999999999999999999999999986667875433
Q ss_pred CCCCceEEEeEeeeeeccccccccchhhhhh
Q 036950 143 VPSNANLHITLEMVSWKTVSDITKDKKVLKK 173 (469)
Q Consensus 143 ip~~~~l~~~v~l~~~~~~~dv~~d~~l~k~ 173 (469)
+|.++.|.|+|+++....-..-|..+.+.
T Consensus 230 --aGk~~~F~V~v~~i~~~~lpeldDEfak~ 258 (392)
T 1t11_A 230 --KGKAAKFAIKVNKVEARELPELNDEFVAR 258 (392)
T ss_dssp --SSCEEEECCCEEEEEEEECCCCSTGGGGG
T ss_pred --CCCeEEEEEEEEEEEcCCCCCcCHHHHHH
Confidence 68899999999999764333334445543
No 83
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.10 E-value=9.1e-10 Score=96.12 Aligned_cols=98 Identities=21% Similarity=0.219 Sum_probs=85.8
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+..+...|+.+++.|+|++|+..|++++.+.+.+ ..+|+|+|.||+++++|++|+.+++++|+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---------------PIYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 457788999999999999999999999999988765 67899999999999999999999999999
Q ss_pred hc-----------------------HHHHHHHHhhCCCCCCcchHH--HHHHHHHHHHHHHHH
Q 036950 368 LD-----------------------KLDIKKALEIDPDNSLEAGWG--VRMEYKLLKEKVREY 405 (469)
Q Consensus 368 ~d-----------------------~~~~~~al~l~p~~~~~~~~~--~~~~l~~~~~~~~~~ 405 (469)
++ +..|+++++++|++. . +...+..++.++.+.
T Consensus 74 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGG-----SDAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSC-----CHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCch-----HHHHHHHHHHHHHHHHHH
Confidence 98 678999999999998 6 566666666655443
No 84
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.05 E-value=4.7e-10 Score=97.66 Aligned_cols=58 Identities=19% Similarity=0.390 Sum_probs=52.3
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCC
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSS 250 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~ 250 (469)
+|+ .++ .||++||++ + ++|.+|.++++|||+.+|.+|++||++.|.|||.+|||+.+.
T Consensus 10 ~v~Y~g~-~dG~~fdss-~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 10 TIRYTLQ-VEGEVLDQG-E-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp EEEEEEE-ETTEEEEEE-E-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEE-ECCEEEEee-E-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 344 777 899999997 3 999999999999999999999999999999999999998653
No 85
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.94 E-value=4.3e-09 Score=88.17 Aligned_cols=98 Identities=28% Similarity=0.390 Sum_probs=84.9
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|+.+++.|+|.+|+..|++++...+.. ..++.|+|.||+++++|++|+.+++++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 5567899999999999999999999999987765 6689999999999999999999999999988
Q ss_pred -----------------------HHHHHHHHhhCCC-----CCCcchHHHHHHHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPD-----NSLEAGWGVRMEYKLLKEKVREYNK 407 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~-----~~~~~~~~~~~~l~~~~~~~~~~~~ 407 (469)
+..|+++++++|+ +. .+...+..++.+.....+
T Consensus 74 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~-----~~~~~l~~~~~~~~~~~e 134 (137)
T 3q49_B 74 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD-----DIPSALRIAKKKRWNSIE 134 (137)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTT-----HHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 6788999999888 66 788888887776654443
No 86
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.90 E-value=1.3e-08 Score=87.80 Aligned_cols=90 Identities=16% Similarity=0.051 Sum_probs=77.5
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.......|+.+++.|+|++|+..|++++.+.|.+ ..+|.|+|.||.++|+|++|+.+++++|+++
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~ 95 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD---------------PKAHRFLGLLYELEENTDKAVECYRRSVELN 95 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhC
Confidence 4455678999999999999999999999998766 7789999999999999999999999999998
Q ss_pred -----------------------HH-HHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 -----------------------KL-DIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 -----------------------~~-~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
.. .+++|++++|+|. .+...+.++-
T Consensus 96 p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~-----~~~~l~~~ll 144 (150)
T 4ga2_A 96 PTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSP-----AVYKLKEQLL 144 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCH-----HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCH-----HHHHHHHHHH
Confidence 33 3689999999998 7766655543
No 87
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.88 E-value=2e-08 Score=85.42 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=81.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|.+|+..|++++...+.+ ..++.|+|.||.++|+|++|+.+++++++++
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD---------------ARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 4456789999999999999999999999987765 6788999999999999999999999999987
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
...|+++++++|++. .......++...+....
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQP-----AHEALAARAGAMLEAVT 137 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCG-----GGHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-----chHHHHHHHHHHHHHHH
Confidence 667888999999887 66555555555554443
No 88
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.85 E-value=2.2e-08 Score=86.27 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=77.8
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|.+|+..|++++...+.+ ..++.|+|.||.++|+|++|+.+++++++++
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD---------------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 4556789999999999999999999999987765 6788999999999999999999999999987
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+..|+++++++|++. .......++...+
T Consensus 86 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~l 136 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXP-----EFXELSTRVSSML 136 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCG-----GGHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC-----cchHHHHHHHHHH
Confidence 667888888888877 5544444444443
No 89
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.84 E-value=2.6e-08 Score=86.28 Aligned_cols=66 Identities=17% Similarity=0.175 Sum_probs=59.8
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|..+++.|+|++|+..|++++...|.+ ..+|.|+|.||.++|+|++|+.++++|+++
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~---------------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN---------------VDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34567899999999999999999999999998866 678999999999999999999999998876
Q ss_pred c
Q 036950 369 D 369 (469)
Q Consensus 369 d 369 (469)
+
T Consensus 100 ~ 100 (151)
T 3gyz_A 100 G 100 (151)
T ss_dssp S
T ss_pred C
Confidence 6
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.78 E-value=2.7e-07 Score=79.27 Aligned_cols=100 Identities=25% Similarity=0.336 Sum_probs=87.6
Q ss_pred hHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHH
Q 036950 283 TQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLC 362 (469)
Q Consensus 283 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~ 362 (469)
..+..+.+..+...|+.++..|+|..|+..|.+++...+.. ..++.|+|.||+++++|++|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 46778899999999999999999999999999999987654 668899999999999999999999
Q ss_pred HHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 363 SKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 363 ~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+++++++ ...|+++++++|++. .+...+..+....
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~-----~~~~~~~~~~~~~ 128 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK-----DAKMKYQECNKIV 128 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHH
Confidence 9999988 678999999999998 7776666654433
No 91
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.76 E-value=6.4e-08 Score=77.80 Aligned_cols=91 Identities=20% Similarity=0.271 Sum_probs=78.5
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.++..|+|.+|+..|.+++...+.+ ..++.|+|.||+++++|++|+..+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 45677899999999999999999999999987654 568899999999999999999999999988
Q ss_pred c-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 369 D-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
+ ...++++++++|++. .+...+..+.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~ 116 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNP-----QLKEGLQNME 116 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH-----HHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCH-----HHHHHHHHhh
Confidence 7 567888888888887 7776666654
No 92
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.69 E-value=1e-07 Score=103.24 Aligned_cols=113 Identities=13% Similarity=0.142 Sum_probs=60.8
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCC------------CC-HHHHH------HHHHHHHHhHhHHHHHH
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSS------------FS-DEEKQ------QAKVLKITCNLNNAACK 349 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~------------~~-~e~~~------~~~~l~~~~~~N~a~~~ 349 (469)
.+..+.+.|+.+.+.|+|++|+..|++||++.+.... .. ++-.. ++++-...+|+|+|.||
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l 87 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTL 87 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3556667777777777777777777777776655410 00 00000 00011133555555555
Q ss_pred HHhhCHHHHHHHHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 036950 350 LKLKEYKQAEKLCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 350 ~kl~~~~~ai~~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
.++|+|++|+.++++||+++ +..|++|++++|++. .+...|..+...+.+..
T Consensus 88 ~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~-----~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 88 KEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP-----DAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH-----HHHHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh-----HHHhhhhhHHHhcccHH
Confidence 55555555555555555555 455666666666665 55555555554444433
No 93
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=1.8e-07 Score=78.67 Aligned_cols=93 Identities=32% Similarity=0.506 Sum_probs=78.1
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|+.++..|+|.+|+..|++++...+. ......++.|+|.||+++++|++|+.+|+++++++
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 456788999999999999999999999987553 12346789999999999999999999999999887
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
...|+++++++|++. .+...+..+.
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~ 143 (148)
T 2dba_A 96 GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNK-----VFQEALRNIS 143 (148)
T ss_dssp SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCH-----HHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH-----HHHHHHHHHH
Confidence 567888888888888 7776666654
No 94
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.66 E-value=2.7e-07 Score=75.53 Aligned_cols=95 Identities=25% Similarity=0.335 Sum_probs=77.1
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|..++..|+|..|+..|.+++...+.. ..++.|+|.||..+++|++|+.++++++++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 45677889999999999999999999999987654 567899999999999999999999999987
Q ss_pred c------------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 369 D------------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 369 d------------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
+ ...|++++++.| +. .+...+..+...+++
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~-----~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TP-----DVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CH-----HHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CH-----HHHHHHHHHHHHHHH
Confidence 4 556777777777 45 666666666665544
No 95
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.63 E-value=1.6e-07 Score=89.74 Aligned_cols=80 Identities=31% Similarity=0.448 Sum_probs=72.9
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..++..|+.+++.|+|.+|+..|++|+...+.+ ..+|+|+|.||+++|+|++|+.+++++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999987765 6789999999999999999999999999998
Q ss_pred -----------------------HHHHHHHHhhCCCCC
Q 036950 370 -----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~ 384 (469)
...|+++++++|++.
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 678999999999873
No 96
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.62 E-value=3.1e-07 Score=81.00 Aligned_cols=95 Identities=13% Similarity=0.156 Sum_probs=74.5
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+.-+.+.|+.+++.|+|++|+..|++|++..|.+ ..++.++|.||.++|+|++|+..+.+++..+
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~ 69 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN---------------VETLLKLGKTYMDIGLPNDAIESLKKFVVLD 69 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 3456689999999999999999999999987765 6678899999999999999999999998877
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
...+.+++.++|++. .+...+..+...+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~-----~~~~~lg~~~~~~g~ 122 (184)
T 3vtx_A 70 TTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYA-----DAYYKLGLVYDSMGE 122 (184)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch-----HHHHHHHHHHHHhCC
Confidence 455666677777766 555555555444433
No 97
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.61 E-value=4.5e-07 Score=74.04 Aligned_cols=98 Identities=32% Similarity=0.392 Sum_probs=82.0
Q ss_pred HHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHH
Q 036950 285 EKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSK 364 (469)
Q Consensus 285 e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~ 364 (469)
.....+..+...|+.++..|+|..|+..|.+++...+.. ..++.++|.||..+++|++|+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 71 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDCER 71 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 344567788899999999999999999999999986654 56789999999999999999999999
Q ss_pred HHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 365 VLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 365 al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+++++ ...++++++++|++. .+...+..+...+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~-----~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE-----TYKSNLKIAELKL 127 (131)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHH
T ss_pred HHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccch-----HHHHHHHHHHHHH
Confidence 99887 567888888888887 7766666655443
No 98
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.61 E-value=3.2e-07 Score=73.37 Aligned_cols=70 Identities=33% Similarity=0.450 Sum_probs=61.4
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.+++.|+|.+|+..|++++...+.. ..++.|+|.||+++|+|++|+.+++++|
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al-- 65 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN---------------PVGYSNKAMALIKLGEYTQAIQMCQQGL-- 65 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHH--
Confidence 35667899999999999999999999999987755 6688999999999999999998877766
Q ss_pred cHHHHHHHHhhCCCCC
Q 036950 369 DKLDIKKALEIDPDNS 384 (469)
Q Consensus 369 d~~~~~~al~l~p~~~ 384 (469)
+++|++.
T Consensus 66 ---------~~~p~~~ 72 (111)
T 2l6j_A 66 ---------RYTSTAE 72 (111)
T ss_dssp ---------TSCSSTT
T ss_pred ---------HhCCCcc
Confidence 7788884
No 99
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.61 E-value=2.4e-07 Score=76.25 Aligned_cols=91 Identities=31% Similarity=0.384 Sum_probs=76.1
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|+.++..|+|.+|+..|.+++...+.. ..++.|+|.||+.+++|++|+.+++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQLE 80 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 5567889999999999999999999999876644 5688999999999999999999999999876
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKE 400 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~ 400 (469)
...|+++++++|++. .+...+..+..
T Consensus 81 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~-----~~~~~l~~~~~ 129 (133)
T 2lni_A 81 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCK-----EAADGYQRCMM 129 (133)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGT-----HHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCch-----HHHHHHHHHHH
Confidence 566777788888877 66666655543
No 100
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.59 E-value=4.6e-07 Score=82.30 Aligned_cols=106 Identities=12% Similarity=0.081 Sum_probs=79.2
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCH-HHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSD-EEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~-e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+..+|..++..|+|.+|+..|++++...|.++..-- ............+++|+|.||.++|+|++|+.+++++|++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 445678999999999999999999999997653210000 0000001122334455999999999999999999999999
Q ss_pred c-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHH
Q 036950 369 D-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKE 400 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~ 400 (469)
+ +..|+++++++|++. .+...+..+.-
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~-----~a~~~lg~~~~ 133 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNL-----AANIFLGNYYY 133 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH-----HHHHHHHHHHH
Confidence 8 678999999999999 88777776643
No 101
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.58 E-value=1e-07 Score=96.19 Aligned_cols=158 Identities=18% Similarity=0.250 Sum_probs=115.1
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
......|+.+++.|+|.+|+..|++++...+.. ......++.++|.++.++|+|++|+..|+++++++
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSI-----------AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 334556999999999999999999999977653 22345689999999999999999999999999887
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhchhhh
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFAKINKLEQAK 427 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~~~~~~~~~~ 427 (469)
...|+++++++|++. .+...+..+...++... ...+...++........+
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~~~~~---~~~~y~~lg~~~~~~~~~ 398 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQ-----QIREGLEKAQRLLKQSQ---KRDYYKILGVKRNAKKQE 398 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCH-----HHHHHHHHHHHHHHHHH---SCCSGGGSCSSTTCCTTH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchH-----HHHHHHHHHHHHhhccc---chhHHHHhCCCccCCHHH
Confidence 678999999999999 89888888877665532 222334444333333334
Q ss_pred hhccccc--cCCCcccccccc-cccchhhhhheeccccccccc
Q 036950 428 SASSMAK--QEPAPMVLIARH-DTSIKLSMIAIESTRTVLISP 467 (469)
Q Consensus 428 ~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 467 (469)
..+..++ ...+|+...... .......|..+..+-+||.||
T Consensus 399 ~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~ 441 (450)
T 2y4t_A 399 IIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 441 (450)
T ss_dssp HHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGG
T ss_pred HHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCH
Confidence 4444332 336676543222 234566788888899999887
No 102
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.58 E-value=8.4e-08 Score=97.39 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=66.2
Q ss_pred EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEE
Q 036950 189 WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVE 268 (469)
Q Consensus 189 ~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ve 268 (469)
.|+ .||+.|+++ + +.|+.|.+|.|.++|||+.+|.+|++|++..|.+|+..+||..+. +|.+++|+|+
T Consensus 169 ~g~-~dG~~fd~~-~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--------ag~~~~F~V~ 236 (432)
T 1w26_A 169 TGS-VDGEEFEGG-K--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--------KGKAAKFAIN 236 (432)
T ss_dssp EEE-SSSCBCSSC-C--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT--------SSCEEEEEEE
T ss_pred EEe-eCCeEccCC-C--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC--------CCceEEEEEE
Confidence 666 599999987 3 689999999999999999999999999999999999999997542 5689999999
Q ss_pred Eeeeee
Q 036950 269 LVSFIK 274 (469)
Q Consensus 269 l~~~~~ 274 (469)
|+++..
T Consensus 237 v~~v~~ 242 (432)
T 1w26_A 237 LKKVEE 242 (432)
T ss_dssp CCEECC
T ss_pred EEEEec
Confidence 999975
No 103
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.58 E-value=2.5e-07 Score=76.51 Aligned_cols=95 Identities=12% Similarity=0.022 Sum_probs=75.1
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHH
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELDKL 371 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~ 371 (469)
.+.+.|..+++.|+|.+|+..|.+++...+.+ ..++.++|.|+..+|++++|+..+++++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al----- 78 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPER---------------EEAWRSLGLTQAENEKDGLAIIALNHAR----- 78 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH-----
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH-----
Confidence 45688999999999999999999999988766 6789999999999999999988777766
Q ss_pred HHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 372 DIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 372 ~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
+++|++. .+...+..+.....+..+.. ..|.+.+.
T Consensus 79 ------~l~P~~~-----~~~~~la~~~~~~g~~~~A~-~~~~~al~ 113 (121)
T 1hxi_A 79 ------MLDPKDI-----AVHAALAVSHTNEHNANAAL-ASLRAWLL 113 (121)
T ss_dssp ------HHCTTCH-----HHHHHHHHHHHHHHHHHHHH-HHHHHHHC
T ss_pred ------HhCCCCH-----HHHHHHHHHHHHcCCHHHHH-HHHHHHHH
Confidence 6778777 77777766666665554443 33555544
No 104
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.51 E-value=4e-07 Score=98.60 Aligned_cols=62 Identities=18% Similarity=0.089 Sum_probs=47.0
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELD------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREY 405 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~ 405 (469)
..+|+|+|.+|.++|+|++|+.++++||+++ ...+-.++..-.+.. ++...++++.......
T Consensus 111 ~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~-----~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 111 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT-----DYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT-----THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH-----HHHHHHHHHHHhChhH
Confidence 6689999999999999999999999999999 444555555556656 6666666665544433
No 105
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.51 E-value=7.6e-07 Score=73.29 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=71.5
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|+|.+|+..|.+++...+..+ ....++.++|.||+++|+|++|+..++++++.+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p 70 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGV------------YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 70 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc------------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC
Confidence 3456789999999999999999999999877542 123578899999999999999999999998765
Q ss_pred -------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 -------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 -------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
...|+++++..|++. .+...+..+.
T Consensus 71 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~-----~~~~a~~~l~ 120 (129)
T 2xev_A 71 THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSD-----AARVAQERLQ 120 (129)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSH-----HHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCh-----HHHHHHHHHH
Confidence 456777777777776 5544444443
No 106
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.50 E-value=1.4e-06 Score=79.52 Aligned_cols=87 Identities=21% Similarity=0.369 Sum_probs=75.7
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc-CCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIG-YDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~-~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|+.+++.|+|.+|+..|++++...+ .+ ..++.|+|.||.++|+|++|+.+++++++++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD---------------SVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC---------------cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999876 43 4678889999999999999999999999988
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKL 397 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~ 397 (469)
+..|+++++++|++. .+...+..
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~ 118 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA-----TIEKLYAI 118 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHH
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH-----HHHHHHHH
Confidence 678999999999988 66444443
No 107
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.49 E-value=2.7e-07 Score=95.32 Aligned_cols=96 Identities=26% Similarity=0.349 Sum_probs=84.6
Q ss_pred HHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 287 IEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 287 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
.+.+..+...|+.+++.|+|++|+..|++|+...+.. ..++.|+|.||+++++|++|+.++++|+
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3567788899999999999999999999999987654 7789999999999999999999999999
Q ss_pred hhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 367 ELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 367 ~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+++ +..|++|++++|++. .+...+..+....
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~-----~~~~~l~~~~~~~ 121 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK-----DAKMKYQECNKIV 121 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCT-----THHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHH
Confidence 998 678999999999999 8887777764443
No 108
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.48 E-value=7.4e-07 Score=80.90 Aligned_cols=60 Identities=20% Similarity=0.260 Sum_probs=56.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 295 EEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+.|..+++.|+|++|+..|++++...|.+ ..++.|+|.||+++|+|++|+.+++++|+++
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 118 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNN---------------VDCLEACAEMQVCRGQEKDALRMYEKILQLE 118 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 48999999999999999999999998766 6789999999999999999999999999998
No 109
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.48 E-value=2.4e-07 Score=72.92 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=57.7
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH-hHhHHHHHHHHhhCHHHHHHHHHHHHhhcHH
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKIT-CNLNNAACKLKLKEYKQAEKLCSKVLELDKL 371 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~-~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~ 371 (469)
..+.|..+++.|+|.+|+..|++++...+.+ .. ++.|+|.||+++|+|++|+.++++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al----- 62 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVG---------------KDEAYYLMGNAYRKLGDWQKALNNYQSAI----- 62 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSST---------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH-----
Confidence 4578999999999999999999999987755 55 89999999999999999988777766
Q ss_pred HHHHHHhhCCCCC
Q 036950 372 DIKKALEIDPDNS 384 (469)
Q Consensus 372 ~~~~al~l~p~~~ 384 (469)
+++|++.
T Consensus 63 ------~~~p~~~ 69 (99)
T 2kc7_A 63 ------ELNPDSP 69 (99)
T ss_dssp ------HHCTTST
T ss_pred ------hcCCCcH
Confidence 6778777
No 110
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.46 E-value=9.3e-08 Score=82.34 Aligned_cols=91 Identities=15% Similarity=0.115 Sum_probs=74.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc------
Q 036950 296 EGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD------ 369 (469)
Q Consensus 296 ~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d------ 369 (469)
.|+.+..+|++++|+..|++++...+. ....++++|.||+++|+|++|+.+++++|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~---------------~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ---------------KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH---------------HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc---------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 467778889999999999999985432 35678999999999999999999999999998
Q ss_pred -----------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 036950 370 -----------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 370 -----------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
+..|+++++++|++. .+...+..+.....+..
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQK-----DLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCChH
Confidence 778999999999999 88888877766554443
No 111
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.43 E-value=1.4e-06 Score=70.02 Aligned_cols=86 Identities=19% Similarity=0.193 Sum_probs=67.0
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHH
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLD 372 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~ 372 (469)
..+.|+.+|+.++|..|+..|++|++..+...... .....++.|+|.||.++|+++.|+...++++
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~--------~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al------ 73 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEIST--------IDKVSVLDYLSYAVYQQGDLDKALLLTKKLL------ 73 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCS--------SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCc--------ccHHHHHHHHHHHHHHccCHHHHHHHHHHHH------
Confidence 35789999999999999999999999875432111 1135688999999999999999988777665
Q ss_pred HHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 373 IKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 373 ~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+++|++. .+...+..++..+
T Consensus 74 -----~l~P~~~-----~~~~n~~~~~~~~ 93 (104)
T 2v5f_A 74 -----ELDPEHQ-----RANGNLKYFEYIM 93 (104)
T ss_dssp -----HHCTTCH-----HHHHHHHHHHHHH
T ss_pred -----hcCCCCH-----HHHhhHHHHHHHH
Confidence 7899998 7766666555443
No 112
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.42 E-value=1.2e-06 Score=87.71 Aligned_cols=63 Identities=16% Similarity=0.062 Sum_probs=33.2
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhC-HHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKE-YKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~-~~~ai~~~~~al~~d 369 (469)
.+...|..+++.|+|.+|+..|+++|.+.+.. ..+|+|++.|+.++|+ |++|+.++++||+++
T Consensus 99 a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~---------------~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~ 162 (382)
T 2h6f_A 99 VYDYFRAVLQRDERSERAFKLTRDAIELNAAN---------------YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ 162 (382)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHhCccC---------------HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC
Confidence 34455666666666666666666666655543 3344444444444443 444444444444444
No 113
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.41 E-value=2.4e-06 Score=82.65 Aligned_cols=101 Identities=19% Similarity=0.289 Sum_probs=87.1
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.......|+.+++.|+|.+|+..|++++...+.. ......++.++|.||.++|+|++|+..++++++++
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 302 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSV-----------AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME 302 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----------hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3444567999999999999999999999987654 23345678899999999999999999999999987
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
...|+++++++|++. .+...+.+++..+++.+
T Consensus 303 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~-----~~~~~l~~~~~~~~~~~ 357 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQ-----QIREGLEKAQRLLKQSQ 357 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH-----HHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh-----HHHHHHHHHHHHHHHhc
Confidence 678999999999999 99999999988877654
No 114
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.41 E-value=1.1e-06 Score=73.29 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=58.9
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..+++.|+|.+|+..|++||.+.+.. ..+|.|+|.||.++|+|++|+.+++++|+++
T Consensus 48 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 48 ILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF---------------IKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh---------------hHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 345679999999999999999999999987765 6789999999999999999999999999998
No 115
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.39 E-value=1.1e-06 Score=69.90 Aligned_cols=64 Identities=13% Similarity=0.008 Sum_probs=57.3
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..+++.|+|++|+..|++++...+.. ..+|.|+|.||.++|+|++|+..+++++++.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDY---------------VGTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 345689999999999999999999999988765 5589999999999999999999999998765
No 116
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.38 E-value=5.3e-06 Score=66.84 Aligned_cols=90 Identities=29% Similarity=0.368 Sum_probs=73.2
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|..|+..|.+++...+.. ..++.++|.||.++++|++|+..++++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 4456788999999999999999999999976543 4578899999999999999999999999875
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
...+++++.++|++. .+...+..+.
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~ 121 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA-----EAKQNLGNAK 121 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-----HHHHHHHHHH
Confidence 456777777788777 6666555543
No 117
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.37 E-value=2.4e-06 Score=85.52 Aligned_cols=91 Identities=11% Similarity=0.002 Sum_probs=80.2
Q ss_pred hhcHHHHHHHHhcCC-HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGK-YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~-~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+..+|+.+++.|+ |++|+..|.+||.+.+.+ ..+|.|++.||.++|+|++|+.+|++||+++
T Consensus 132 ~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~---------------~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld 196 (382)
T 2h6f_A 132 TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN---------------YQVWHHRRVLVEWLRDPSQELEFIADILNQD 196 (382)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345679999999997 999999999999988766 7789999999999999999999999999998
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEK 401 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~ 401 (469)
+..|+++++++|+|. .+...+..+...
T Consensus 197 P~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~-----~a~~~lg~~l~~ 246 (382)
T 2h6f_A 197 AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN-----SVWNQRYFVISN 246 (382)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH-----HHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHH
Confidence 788999999999998 777777666555
No 118
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.35 E-value=5.3e-06 Score=63.46 Aligned_cols=79 Identities=25% Similarity=0.355 Sum_probs=65.4
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.++|.+|+..|.+++...+.. ..++.|+|.||.++++|++|+..+++++
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~--- 70 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKAL--- 70 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHH---
Confidence 4556788999999999999999999999987654 5678999999999999999988777766
Q ss_pred HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 ~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
+++|++. .+...+..+.
T Consensus 71 --------~~~p~~~-----~~~~~l~~~~ 87 (91)
T 1na3_A 71 --------ELDPNNA-----EAKQNLGNAK 87 (91)
T ss_dssp --------HHCTTCH-----HHHHHHHHHH
T ss_pred --------hcCCCCH-----HHHHHHHHHH
Confidence 6778887 6666665554
No 119
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.34 E-value=4e-06 Score=76.52 Aligned_cols=62 Identities=21% Similarity=0.158 Sum_probs=35.8
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+...|..+++.|+|++|+..|++++...|.+ ..++.|+|.|+.++|++++|+..++++++++
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 69 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALKENPQD---------------PEALYWLARTQLKLGLVNPALENGKTLVART 69 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4456666666777777777777666655544 3344555555555555555555555555444
No 120
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.34 E-value=1.9e-06 Score=74.65 Aligned_cols=65 Identities=17% Similarity=0.030 Sum_probs=58.2
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHH-------hcCCCCCCHHHHHHHHHHHHHhH----hHHHHHHHHhhCHHHH
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNY-------IGYDSSFSDEEKQQAKVLKITCN----LNNAACKLKLKEYKQA 358 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~-------~~~~~~~~~e~~~~~~~l~~~~~----~N~a~~~~kl~~~~~a 358 (469)
+..+.+.|..+.+.|+|++|+..|.+||.+ .+.+ ..+| +|++.|+.++|+|++|
T Consensus 57 a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~---------------~~A~~~~~~~rG~aL~~lgr~eEA 121 (159)
T 2hr2_A 57 AFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE---------------GKLWISAVYSRALALDGLGRGAEA 121 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH---------------HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch---------------HHHHHHHHHhHHHHHHHCCCHHHH
Confidence 447789999999999999999999999998 4432 5556 9999999999999999
Q ss_pred HHHHHHHHhhc
Q 036950 359 EKLCSKVLELD 369 (469)
Q Consensus 359 i~~~~~al~~d 369 (469)
+.++++||+++
T Consensus 122 l~~y~kAlel~ 132 (159)
T 2hr2_A 122 MPEFKKVVEMI 132 (159)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcC
Confidence 99999999998
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.27 E-value=2e-06 Score=74.23 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=55.4
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+...|..+++.|+|++|+..|.+|+.+.|.+ ..+|+|+|.||.++|+|++|+.++++||+
T Consensus 71 ~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~---------------~~~~~~lg~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 71 DYIMGLAAIYQIKEQFQQAADLYAVAFALGKND---------------YTPVFHTGQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC---------------CHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345679999999999999999999999998876 55889999999999999999998887774
No 122
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.25 E-value=1.2e-05 Score=73.37 Aligned_cols=105 Identities=13% Similarity=0.082 Sum_probs=83.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh-----------hCHHHHHH
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL-----------KEYKQAEK 360 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl-----------~~~~~ai~ 360 (469)
.+...|..+++.|++++|+..|++++...|.+ ..++.|++.+|.++ |++++|+.
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~ 105 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRY---------------LGGYMVLSEAYVALYRQAEDRERGKGYLEQALS 105 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHH
Confidence 45678999999999999999999999988765 66788999999999 99999999
Q ss_pred HHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036950 361 LCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIF 417 (469)
Q Consensus 361 ~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf 417 (469)
.++++++++ +..|+++++++ ++. .+...+..+.....+..+.. ..|.+..
T Consensus 106 ~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~-----~~~~~la~~~~~~g~~~~A~-~~~~~al 178 (217)
T 2pl2_A 106 VLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTP-----EIRSALAELYLSMGRLDEAL-AQYAKAL 178 (217)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCH-----HHHHHHHHHHHHHTCHHHHH-HHHHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cch-----HHHHHHHHHHHHcCCHHHHH-HHHHHHH
Confidence 999999887 66788888888 776 77777777766655554433 3355544
Q ss_pred h
Q 036950 418 A 418 (469)
Q Consensus 418 ~ 418 (469)
.
T Consensus 179 ~ 179 (217)
T 2pl2_A 179 E 179 (217)
T ss_dssp H
T ss_pred H
Confidence 4
No 123
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.23 E-value=1.4e-05 Score=69.79 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=74.8
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHH-HHHhhCH--HHHHHHHHHHHh
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAAC-KLKLKEY--KQAEKLCSKVLE 367 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~-~~kl~~~--~~ai~~~~~al~ 367 (469)
..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.| |++.++| ++|+..++++++
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN---------------AELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC---------------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 355689999999999999999999999988765 5678999999 8899999 999999999999
Q ss_pred hc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHH
Q 036950 368 LD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLL 398 (469)
Q Consensus 368 ~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~ 398 (469)
++ ...|+++++++|++. .....+..+
T Consensus 110 ~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~~~~i 158 (177)
T 2e2e_A 110 LDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRI-----NRTQLVESI 158 (177)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS-----CHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCc-----cHHHHHHHH
Confidence 87 667999999999988 554444433
No 124
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.23 E-value=4.4e-07 Score=90.82 Aligned_cols=78 Identities=10% Similarity=0.166 Sum_probs=65.0
Q ss_pred eEE-EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEE
Q 036950 186 MVQ-WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLF 264 (469)
Q Consensus 186 ~V~-~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~ 264 (469)
+|+ .|+ .||+.|+++ .+.|+.|.+|.|.++|||+.+|.+|++|++..|.++....||..+ .+|.+++
T Consensus 168 ~i~y~g~-~dG~~fd~~---~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~--------laGk~~~ 235 (392)
T 1t11_A 168 SIDFVGS-IDGVEFEGG---KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN--------LKGKAAK 235 (392)
T ss_dssp EEEEEEE-SSSSCCTTC---EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT--------TSSCEEE
T ss_pred EEEEEEE-ECCEEccCC---CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCC--------CCCCeEE
Confidence 445 666 589999876 267999999999999999999999999999999997555677532 2578999
Q ss_pred EEEEEeeeeec
Q 036950 265 YEVELVSFIKE 275 (469)
Q Consensus 265 f~vel~~~~~~ 275 (469)
|+|+|+++...
T Consensus 236 F~V~v~~i~~~ 246 (392)
T 1t11_A 236 FAIKVNKVEAR 246 (392)
T ss_dssp ECCCEEEEEEE
T ss_pred EEEEEEEEEcC
Confidence 99999999853
No 125
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.22 E-value=6.4e-06 Score=67.09 Aligned_cols=69 Identities=19% Similarity=0.202 Sum_probs=59.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|++|+..|.+++...+.. ..++.|+|.||.++|+|++|+..++++|
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al--- 88 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH---------------QALRVFYAMVLYNLGRYEQGVELLLKII--- 88 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHH---
Confidence 4456789999999999999999999999988765 6688999999999999999998887776
Q ss_pred HHHHHHHHhhCCCCC
Q 036950 370 KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 ~~~~~~al~l~p~~~ 384 (469)
.++|++.
T Consensus 89 --------~~~p~~~ 95 (117)
T 3k9i_A 89 --------AETSDDE 95 (117)
T ss_dssp --------HHHCCCH
T ss_pred --------HhCCCcH
Confidence 5566666
No 126
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.20 E-value=1e-05 Score=69.97 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=67.1
Q ss_pred hhhcHHHHHHHHhcCCH----------HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh----CH
Q 036950 290 AGKKKEEGNVLFKAGKY----------ERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK----EY 355 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~----------~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~----~~ 355 (469)
+..+.+.|+.+...++| ++|+..|++||.+.|.. ..+|+|++.+|..++ +|
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~---------------~~A~~~LG~ay~~lg~l~P~~ 100 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK---------------DEAVWCIGNAYTSFAFLTPDE 100 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc---------------HHHHHHHHHHHHHhcccCcch
Confidence 34456788888888775 59999999999998876 778999999999997 44
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 356 KQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 356 ~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
..|..++++|+ ..|++|++++|++. ..++.++.+.+.-.
T Consensus 101 ~~a~g~~~eA~----~~~~kAl~l~P~~~-----~y~~al~~~~ka~e 139 (158)
T 1zu2_A 101 TEAKHNFDLAT----QFFQQAVDEQPDNT-----HYLKSLEMTAKAPQ 139 (158)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHCTTCH-----HHHHHHHHHHTHHH
T ss_pred hhhhccHHHHH----HHHHHHHHhCCCCH-----HHHHHHHHHHhCHh
Confidence 55555555555 36666778888888 77777666655443
No 127
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.19 E-value=1e-05 Score=82.66 Aligned_cols=83 Identities=28% Similarity=0.328 Sum_probs=74.9
Q ss_pred HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHH
Q 036950 286 KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKV 365 (469)
Q Consensus 286 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~a 365 (469)
+.+.+..+...|+.+++.|+|.+|+..|++++...+ + ..++.++|.||+++|+|++|+.+++++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~---------------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-D---------------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-C---------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-c---------------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 567889999999999999999999999999999764 1 568999999999999999999999999
Q ss_pred Hhhc-----------------------HHHHHHHHhhCCCCC
Q 036950 366 LELD-----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 366 l~~d-----------------------~~~~~~al~l~p~~~ 384 (469)
++++ ...|++++.++|.+.
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 9987 677888999988766
No 128
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.19 E-value=1.5e-05 Score=72.71 Aligned_cols=92 Identities=11% Similarity=0.063 Sum_probs=76.4
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc---
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD--- 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d--- 369 (469)
+...|..+++.|+|.+|+..|.+++...+.. ..++.++|.||.++|+|++|+..++++++++
T Consensus 45 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 45 AYNCGVCADNIKKYKEAADYFDIAIKKNYNL---------------ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHhCcch---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 3458999999999999999999999876643 6688999999999999999999999999876
Q ss_pred ---------------------------HHHHHHHHhhCCC--CCCcchHHHHHHHHHHHHHHHH
Q 036950 370 ---------------------------KLDIKKALEIDPD--NSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 370 ---------------------------~~~~~~al~l~p~--~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
+..|+++++++|+ +. .+...+..+......
T Consensus 110 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-----~~~~~l~~~~~~~~~ 168 (228)
T 4i17_A 110 ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKT-----DALYSLGVLFYNNGA 168 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccH-----HHHHHHHHHHHHHHH
Confidence 6679999999999 87 777666666544433
No 129
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.18 E-value=6.8e-06 Score=75.54 Aligned_cols=65 Identities=28% Similarity=0.356 Sum_probs=55.0
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|.+|+..|++++...+.. ..++.|+|.||.++|+|++|+.+++++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 3445678999999999999999999999877654 5678899999999999999999999988776
No 130
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.16 E-value=4.5e-06 Score=79.61 Aligned_cols=63 Identities=16% Similarity=0.238 Sum_probs=57.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..+++.|+|.+|+..|++|+...+.. ..+++|+|.+|.++|+|++|+.++.++++++
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 40 YYTNRALCYLKMQQPEQALADCRRALELDGQS---------------VKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45679999999999999999999999987654 6789999999999999999999999999986
No 131
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.13 E-value=1.4e-05 Score=80.99 Aligned_cols=98 Identities=18% Similarity=0.109 Sum_probs=75.8
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..++..|+|++|+..|++|+.+.+..... ....-....|.|+|.+|..+|+|++|+.++++++++.
T Consensus 53 ~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 53 MCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 34568999999999999999999999986422100 0011125679999999999999999999999999864
Q ss_pred -------------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHH
Q 036950 370 -------------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKE 400 (469)
Q Consensus 370 -------------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~ 400 (469)
+..|++|++++|++. ++...+..+..
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~-----~~~~~~~~~~~ 183 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP-----EFTSGLAIASY 183 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHH
Confidence 567899999999998 77666655533
No 132
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.12 E-value=4.3e-05 Score=71.00 Aligned_cols=81 Identities=20% Similarity=0.110 Sum_probs=72.2
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|+|++|+.++++++++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---------------PEVFNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 35556788999999999999999999999987654 568899999999999999999999999998
Q ss_pred c-----------------------HHHHHHHHhhCCCCC
Q 036950 369 D-----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~ 384 (469)
+ ...|+++++++|++.
T Consensus 107 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 107 DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 7 677999999999987
No 133
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.11 E-value=1.7e-05 Score=65.85 Aligned_cols=69 Identities=14% Similarity=0.056 Sum_probs=57.4
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+.+.|..+++.|+|++|+..|++||.+.+..... ......+|.|++.||.++++|++|+.+++++|+
T Consensus 43 ~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 43 TFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD--------YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh--------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345689999999999999999999999987754322 234577899999999999999999988877763
No 134
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.11 E-value=8.5e-06 Score=71.50 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=86.3
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|+|.+|+..|++++...|.+ ..++.|+|.+|+++|+|++|+..++++++.+
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSR---------------GDVKLAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS---------------HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 345688999999999999999999999988766 6789999999999999999999999887652
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
...|+++++++|++. .+.-.+..+.....+..+.. ..|.++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~-----~~~~~la~~~~~~g~~~~A~-~~~~~~l~ 136 (176)
T 2r5s_A 72 DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNF-----ELACELAVQYNQVGRDEEAL-ELLWNILK 136 (176)
T ss_dssp CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHTTCHHHHH-HHHHHHHT
T ss_pred ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcccHHHHH-HHHHHHHH
Confidence 567888999999998 88888877766655554443 23444443
No 135
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.10 E-value=1e-05 Score=83.27 Aligned_cols=78 Identities=21% Similarity=0.302 Sum_probs=70.3
Q ss_pred cccCCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHH
Q 036950 277 ESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYK 356 (469)
Q Consensus 277 ~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~ 356 (469)
....++.+++.+.+..+...|+.+++.|+|.+|+..|++++...+.+ ..++.|+|.||+++|+|+
T Consensus 12 ~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~ 76 (537)
T 3fp2_A 12 QLKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNE---------------PVFYSNISACYISTGDLE 76 (537)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHH
T ss_pred hhcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHH
Confidence 34567889999999999999999999999999999999999987765 678999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 036950 357 QAEKLCSKVLELD 369 (469)
Q Consensus 357 ~ai~~~~~al~~d 369 (469)
+|+..|+++++++
T Consensus 77 ~A~~~~~~al~~~ 89 (537)
T 3fp2_A 77 KVIEFTTKALEIK 89 (537)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999776
No 136
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.10 E-value=2.1e-05 Score=75.08 Aligned_cols=108 Identities=12% Similarity=0.106 Sum_probs=89.2
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..++..|++++|+..|++++...|.. ..++.|+|.+|+.+|++++|+..+++++..+
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p 182 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN---------------GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ 182 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC---------------HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc---------------hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc
Confidence 446789999999999999999999999998876 6689999999999999999999999998765
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFAK 419 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~~ 419 (469)
...|++++.++|++. +++-.+..+.....+..+... .|.++...
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~-----~~~~~la~~l~~~g~~~~A~~-~l~~~l~~ 248 (287)
T 3qou_A 183 DTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDA-----ALATQLALQLHQVGRNEEALE-LLFGHLRX 248 (287)
T ss_dssp SHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHHH-HHHHHHHH
T ss_pred chHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccH-----HHHHHHHHHHHHcccHHHHHH-HHHHHHhc
Confidence 567899999999999 888888877666555544443 34555544
No 137
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.08 E-value=6.1e-05 Score=70.20 Aligned_cols=83 Identities=16% Similarity=0.224 Sum_probs=71.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|.+|+..|++++...+..+ ....++.++|.||+++|+|++|+..++++++++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~------------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHE------------WAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCST------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCc------------chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 45667899999999999999999999999876542 225688999999999999999999999999973
Q ss_pred ----------------------------------HHHHHHHHhhCCCCC
Q 036950 370 ----------------------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 ----------------------------------~~~~~~al~l~p~~~ 384 (469)
+..|+++++.+|++.
T Consensus 83 p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 346888899999987
No 138
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.07 E-value=1.9e-05 Score=73.47 Aligned_cols=53 Identities=11% Similarity=-0.029 Sum_probs=35.4
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHH
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEY 395 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l 395 (469)
..+|.++|.||.++|+|++|+.+++++++++ +..|+++++++|++. .+...+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~-----~~~~~l 148 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDP-----KVFYEL 148 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCH-----HHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcH-----HHHHHH
Confidence 3346677777777777777777777777765 455666666677766 555555
Q ss_pred H
Q 036950 396 K 396 (469)
Q Consensus 396 ~ 396 (469)
.
T Consensus 149 ~ 149 (272)
T 3u4t_A 149 G 149 (272)
T ss_dssp H
T ss_pred H
Confidence 5
No 139
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.07 E-value=2.2e-05 Score=82.34 Aligned_cols=108 Identities=6% Similarity=-0.004 Sum_probs=87.7
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|+|++|+..|++++...+.+ ..++.|+|.||.++|+|++|+.+++++++++
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 88 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPGH---------------PEAVARLGRVRWTQQRHAEAAVLLQQASDAAP 88 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 456788999999999999999999999987654 6688999999999999999999999999988
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhh
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV---REYNKKDVQFYGNIFAK 419 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~---~~~~~~e~~~~~~mf~~ 419 (469)
.+.|+++++++|++. .+...+..+...+ .+..+. ...|.+.+..
T Consensus 89 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~~~~g~~~~A-~~~~~~al~~ 157 (568)
T 2vsy_A 89 EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEP-----YITAQLLNWRRRLCDWRALDVL-SAQVRAAVAQ 157 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCCTTHHHH-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHhhccccHHHH-HHHHHHHHhc
Confidence 678999999999998 8888777777666 443332 2334554443
No 140
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.07 E-value=2.8e-05 Score=69.75 Aligned_cols=62 Identities=13% Similarity=0.021 Sum_probs=51.2
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+...|..+++.|+|.+|+..|.+++...+.. ..+++|+|.||+++|+|++|+.+++++++
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---------------AVAYFQRGMLYYQTEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 345678888888888888888888888876544 56788999999999999999998888887
No 141
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.04 E-value=4e-05 Score=78.81 Aligned_cols=93 Identities=15% Similarity=-0.022 Sum_probs=79.9
Q ss_pred hhhcHHHHHHHHhcCCH-HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKAGKY-ERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~-~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+...|..++..|+| .+|+..|++|+...+.. ..+|.|+|.||+++|+|++|+.+++++|++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL---------------VEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44566899999999999 99999999999987765 668999999999999999999999999987
Q ss_pred c-------------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 369 D-------------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 369 d-------------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+ +..|++|++++|++. .+...+..+....
T Consensus 167 ~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~lg~~~~~~ 226 (474)
T 4abn_A 167 CKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG-----RSWYILGNAYLSL 226 (474)
T ss_dssp CCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHH
Confidence 6 456888999999998 7777776666554
No 142
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.04 E-value=8.7e-05 Score=67.78 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=57.5
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..+++.|+|++|+..|++++...+..+. ...+++++|.||+++|+|++|+..++++++.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY------------SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 45678899999999999999999999998765421 24578999999999999999999999999875
No 143
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=1.4e-05 Score=65.56 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=58.6
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..+++.|+|.+|+..|++++.+.+.. ..+|.|+|.||.++|+|++|+.+++++++++
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF---------------VRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 345689999999999999999999999987765 6789999999999999999999999999987
No 144
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.04 E-value=1.4e-05 Score=68.95 Aligned_cols=66 Identities=9% Similarity=0.058 Sum_probs=60.4
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+.-+.+.|..+++.|+|.+|+..|++||.+.+.. ..+|+++|.||+.+|+|++|+.+++++|++
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN---------------EKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc---------------hHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 34556789999999999999999999999987765 778999999999999999999999999999
Q ss_pred c
Q 036950 369 D 369 (469)
Q Consensus 369 d 369 (469)
+
T Consensus 127 ~ 127 (162)
T 3rkv_A 127 H 127 (162)
T ss_dssp C
T ss_pred C
Confidence 9
No 145
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.03 E-value=1.5e-05 Score=62.87 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=65.9
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcH
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELDK 370 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~ 370 (469)
..+...|..++..|+|.+|+..|.+++...+.. ..++.|+|.+|.++++|++|+..+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~---- 67 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---------------SKYWLMKGKALYNLERYEEAVDCYNYVI---- 67 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHH----
Confidence 345678999999999999999999999987654 5578999999999999999988777766
Q ss_pred HHHHHHHhhCCC--CCCcchHHHHHHHHHHHHHH
Q 036950 371 LDIKKALEIDPD--NSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 371 ~~~~~al~l~p~--~~~~~~~~~~~~l~~~~~~~ 402 (469)
+++|+ +. .+...+..+...+
T Consensus 68 -------~~~~~~~~~-----~~~~~l~~~~~~~ 89 (112)
T 2kck_A 68 -------NVIEDEYNK-----DVWAAKADALRYI 89 (112)
T ss_dssp -------HTSCCTTCH-----HHHHHHHHHHTTC
T ss_pred -------HhCcccchH-----HHHHHHHHHHHHH
Confidence 66788 76 6666666665544
No 146
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.03 E-value=1.9e-05 Score=70.92 Aligned_cols=78 Identities=21% Similarity=0.150 Sum_probs=68.0
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.++..|+|.+|+..|++++. .. ..++.|+|.||+++|+|++|+.++++++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~---~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD---PH---------------SRICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS---CC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC---CC---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 455677899999999999999999999962 11 468999999999999999999999999998
Q ss_pred c-----------------------HHHHHHHHhhCCCCC
Q 036950 369 D-----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~ 384 (469)
+ +..|++++++.|++.
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 7 678999999888764
No 147
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.02 E-value=7.1e-05 Score=65.47 Aligned_cols=107 Identities=11% Similarity=0.081 Sum_probs=82.0
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|++++|+..|.+++...+.. ..++.+++.++...++++.|+..+.++++++
T Consensus 40 ~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~ 104 (184)
T 3vtx_A 40 ETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS---------------AEAYYILGSANFMIDEKQAAIDALQRAIALNT 104 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 345678999999999999999999999887655 5567777888888888888888888888776
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
+..|+++++++|++. .+...+..+...+.+..+.. ..|.+.+.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~-----~~~~~lg~~~~~~g~~~~A~-~~~~~al~ 169 (184)
T 3vtx_A 105 VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI-----RAYQSIGLAYEGKGLRDEAV-KYFKKALE 169 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh-----hHHHHHHHHHHHCCCHHHHH-HHHHHHHh
Confidence 567888889999998 88888888877666554443 33454443
No 148
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.02 E-value=1.7e-05 Score=85.43 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=82.1
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..+++.|+|++|+..|++++...+.+ ..+|+|+|.+|+++|+|++|+.++++||+++
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 499 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERVGWR---------------WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG 499 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccCcch---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34578999999999999999999999988766 6789999999999999999999999999998
Q ss_pred --------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 036950 370 --------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNK 407 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 407 (469)
+..|++|++++|++. .+...+..+...+.+..+
T Consensus 500 ~~~~~~~lg~~~~~~g~~~~~~~~~~al~~~P~~~-----~a~~~lg~~~~~~g~~~~ 552 (681)
T 2pzi_A 500 ELAPKLALAATAELAGNTDEHKFYQTVWSTNDGVI-----SAAFGLARARSAEGDRVG 552 (681)
T ss_dssp CSHHHHHHHHHHHHHTCCCTTCHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHH
T ss_pred ChHHHHHHHHHHHHcCChHHHHHHHHHHHhCCchH-----HHHHHHHHHHHHcCCHHH
Confidence 236899999999998 887777777665554443
No 149
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.01 E-value=4.7e-05 Score=73.35 Aligned_cols=87 Identities=24% Similarity=0.261 Sum_probs=76.0
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|+.++..|+|.+|+..|++++...+.. ..++.++|.||+.+|+|++|+..++++++++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4567789999999999999999999999987654 5689999999999999999999999999987
Q ss_pred -----------------------HHHHHHHHhhCC---CCCCcchHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDP---DNSLEAGWGVRMEYK 396 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p---~~~~~~~~~~~~~l~ 396 (469)
...|+++++++| ++. .+...+.
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~-----~~~~~l~ 115 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEK-----EAESQLV 115 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHH-----HHHHHHH
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChH-----HHHHHHH
Confidence 678999999999 777 6665554
No 150
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.01 E-value=2.5e-05 Score=65.89 Aligned_cols=63 Identities=21% Similarity=0.157 Sum_probs=57.1
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..+++.|+|++|+..|.+++.+.+.+ ..++.|+|.||..+|+|++|+.+++++++++
T Consensus 54 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 54 YFLGLGACRQSLGLYEQALQSYSYGALMDINE---------------PRFPFHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---------------cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999988765 5578999999999999999999999999876
No 151
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.98 E-value=4.1e-05 Score=61.77 Aligned_cols=62 Identities=8% Similarity=-0.053 Sum_probs=54.7
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+...|..++..|+|++|+..|.+++...+.. ..++.|+|.||.++|++++|+..+++++++
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPTY---------------SVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999987654 567899999999999999999988887754
No 152
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.98 E-value=9.3e-05 Score=59.92 Aligned_cols=90 Identities=27% Similarity=0.299 Sum_probs=68.4
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc---
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD--- 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d--- 369 (469)
+...|..++..|++.+|+..|.+++...+.. ..++.++|.++...+++++|+..++++++.+
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 68 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 68 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc
Confidence 4567888889999999999999998865433 4567888999999999999999998888765
Q ss_pred --------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 370 --------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
...+++++...|++. .+...+..+....
T Consensus 69 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~la~~~~~~ 116 (136)
T 2fo7_A 69 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA-----EAWYNLGNAYYKQ 116 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh-----HHHHHHHHHHHHH
Confidence 456777777888777 6655555554433
No 153
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.97 E-value=7.5e-05 Score=68.37 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=62.3
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCC------------CC-HHHH---HH---HHH-------HHHHhH
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSS------------FS-DEEK---QQ---AKV-------LKITCN 342 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~------------~~-~e~~---~~---~~~-------l~~~~~ 342 (469)
.+..+...|+.++..|+|.+|+..|.+++... .... .. ++-. .. ..+ ....++
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 82 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF 82 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH
Confidence 46667778888888888888888888887765 2210 00 0000 00 000 114556
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHhhc---------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 343 LNNAACKLKLKEYKQAEKLCSKVLELD---------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 343 ~N~a~~~~kl~~~~~ai~~~~~al~~d---------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
.++|.||.++++|++|+..++++++++ ...+++++..+|++. .+...+..+.....
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 153 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKA-----EEARLEGKEYFTKS 153 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH-----HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchH-----HHHHHHHHHHHHhc
Confidence 666666666666666666666666654 445555666666665 55555555544433
No 154
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.96 E-value=1.9e-05 Score=67.46 Aligned_cols=63 Identities=21% Similarity=0.114 Sum_probs=57.2
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..+++.|+|++|+..|.+++.+.+.+ ..+++|+|.||+.+|++++|+.+++++++++
T Consensus 57 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 57 FFLGLGACRQAMGQYDLAIHSYSYGAVMDIXE---------------PRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---------------chHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 34578999999999999999999999988765 5578999999999999999999999999875
No 155
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.95 E-value=2.2e-05 Score=67.74 Aligned_cols=64 Identities=16% Similarity=0.094 Sum_probs=58.8
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..+++.|+|.+|+..|.+++.+.+.. ..+|.|+|.||.++|+|++|+.+++++|+++
T Consensus 46 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 46 IYLSNRAAAYSASGQHEKAAEDAELATVVDPKY---------------SKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345689999999999999999999999987765 6789999999999999999999999999988
No 156
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.95 E-value=0.00013 Score=62.79 Aligned_cols=94 Identities=18% Similarity=0.187 Sum_probs=71.9
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..++..|++.+|+..|.+++...+.. ..++.++|.+|..+++|++|+..++++++.+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 108 (186)
T 3as5_A 44 VALHLGIAYVKTGAVDRGTELLERSLADAPDN---------------VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI 108 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH
Confidence 34567888888888888888888888875543 4577888888999999999999888888876
Q ss_pred ---------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 036950 370 ---------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREY 405 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~ 405 (469)
...++++++.+|++. .+...+..+.......
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~la~~~~~~~~~ 160 (186)
T 3as5_A 109 NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEG-----KVHRAIAFSYEQMGRH 160 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccch-----HHHHHHHHHHHHcCCH
Confidence 567788888888887 7776666666554433
No 157
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.93 E-value=3.9e-05 Score=78.89 Aligned_cols=98 Identities=16% Similarity=0.032 Sum_probs=84.1
Q ss_pred hhcHHHHHHHHhc---------CCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh--------h
Q 036950 291 GKKKEEGNVLFKA---------GKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL--------K 353 (469)
Q Consensus 291 ~~~k~~Gn~~fk~---------~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl--------~ 353 (469)
..+...|..++.. |+|++|+..|++|+.+.+.+ ..++.|+|.||+.+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD---------------GRSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHHHhhccccc
Confidence 3456788889998 99999999999999987765 66889999999999 9
Q ss_pred CHHHHHHHHHHHHhhc--------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 036950 354 EYKQAEKLCSKVLELD--------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNK 407 (469)
Q Consensus 354 ~~~~ai~~~~~al~~d--------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 407 (469)
+|++|+.+++++++++ +..|++|++++|++. .+...+..+...+.+..+
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~-----~a~~~l~~~~~~lg~~~e 310 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP-----EPQQREQQLLEFLSRLTS 310 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHHHHHH
Confidence 9999999999999965 678999999999999 888888887777665544
Q ss_pred H
Q 036950 408 K 408 (469)
Q Consensus 408 ~ 408 (469)
.
T Consensus 311 A 311 (474)
T 4abn_A 311 L 311 (474)
T ss_dssp H
T ss_pred H
Confidence 3
No 158
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.91 E-value=0.00011 Score=66.79 Aligned_cols=88 Identities=18% Similarity=0.123 Sum_probs=50.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-----
Q 036950 295 EEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD----- 369 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d----- 369 (469)
..|..++..|+|++|+..|.+++...+.. ..++.++|.+|+++|+|++|+..++++++++
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 160 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRAGMEN---------------GDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTE 160 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTCCS---------------HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHH
Confidence 44555555555555555555555544332 3356666666666666666666666666654
Q ss_pred ------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 370 ------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 ------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+..|+++++.+|++. .+...+..+....
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~la~~~~~~ 206 (243)
T 2q7f_A 161 ARFQFGMCLANEGMLDEALSQFAAVTEQDPGHA-----DAFYNAGVTYAYK 206 (243)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH-----HHHHHHHHHHHHc
Confidence 445666666666665 5555555444433
No 159
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.90 E-value=9.1e-05 Score=70.87 Aligned_cols=67 Identities=13% Similarity=0.191 Sum_probs=52.8
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-------------
Q 036950 303 AGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD------------- 369 (469)
Q Consensus 303 ~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d------------- 369 (469)
.|+|++|+..|++++...+.+ ..+++|+|.||+++|+|++|+..++++|+++
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~---------------~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~ 243 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPT---------------LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVL 243 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 356666666666666654433 5689999999999999999999999999987
Q ss_pred -----------HHHHHHHHhhCCCCC
Q 036950 370 -----------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 -----------~~~~~~al~l~p~~~ 384 (469)
.+.++++++++|++.
T Consensus 244 ~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 244 SQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 345678888888887
No 160
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.90 E-value=0.00019 Score=66.76 Aligned_cols=78 Identities=10% Similarity=0.097 Sum_probs=60.5
Q ss_pred hcHHHHHHHHh--------cCCHHHHHHHHHHHHHHhcCCCCCCH--HHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHH
Q 036950 292 KKKEEGNVLFK--------AGKYERASKRYEQAVNYIGYDSSFSD--EEKQQAKVLKITCNLNNAACKLKLKEYKQAEKL 361 (469)
Q Consensus 292 ~~k~~Gn~~fk--------~~~~~~A~~~Y~~al~~~~~~~~~~~--e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~ 361 (469)
.+...|..+++ .|+|.+|+..|++++...|....... .............+.++|.||+++|+|++|+..
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 170 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVT 170 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 45678999999 99999999999999998876543221 112233334455579999999999999999999
Q ss_pred HHHHHhhc
Q 036950 362 CSKVLELD 369 (469)
Q Consensus 362 ~~~al~~d 369 (469)
++++++..
T Consensus 171 ~~~~l~~~ 178 (261)
T 3qky_A 171 YEAVFDAY 178 (261)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHC
Confidence 99999764
No 161
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.90 E-value=4.3e-05 Score=74.42 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=63.3
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|+|++|+..|++++...+.. ..++.|+|.||.++|+|++|+..++++++++
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND---------------YLLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 344567888899999999999999999876544 5578889999999999999999999988876
Q ss_pred ----------------------HHHHHHHHhhCCCC
Q 036950 370 ----------------------KLDIKKALEIDPDN 383 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~ 383 (469)
...|+++++++|++
T Consensus 283 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 283 GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 56677777777776
No 162
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.89 E-value=7.3e-05 Score=64.49 Aligned_cols=96 Identities=20% Similarity=0.212 Sum_probs=79.9
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|++++|+..++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD---------------VDVALHLGIAYVKTGAVDRGTELLERSLAD 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 35566789999999999999999999999876543 567899999999999999999999999998
Q ss_pred c-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 369 D-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
+ ...+++++..+|++. .+...+..+......
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~~a~~~~~~~~ 125 (186)
T 3as5_A 72 APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINF-----NVRFRLGVALDNLGR 125 (186)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhH-----HHHHHHHHHHHHcCc
Confidence 6 567889999999988 776666665544433
No 163
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.88 E-value=5.5e-05 Score=72.19 Aligned_cols=71 Identities=28% Similarity=0.323 Sum_probs=58.7
Q ss_pred hhhcHHHHHHHHhc-CCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKA-GKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~-~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+.+.|..+... |+|++|+..|++|+.+.+.... ......++.|+|.+|.++|+|++|+.++++++++
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS---------VALSNKCFIKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC---------hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45667889999996 9999999999999998764321 1223567999999999999999999999999975
Q ss_pred c
Q 036950 369 D 369 (469)
Q Consensus 369 d 369 (469)
.
T Consensus 188 ~ 188 (292)
T 1qqe_A 188 S 188 (292)
T ss_dssp T
T ss_pred H
Confidence 4
No 164
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.88 E-value=6.6e-05 Score=73.31 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=65.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..+++.|+|.+|+..|++++...+.. ..++.|++.||.++|+|++|+..++++++++
T Consensus 215 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 279 (365)
T 4eqf_A 215 LQTGLGVLFHLSGEFNRAIDAFNAALTVRPED---------------YSLWNRLGATLANGDRSEEAVEAYTRALEIQPG 279 (365)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 45578899999999999999999999987654 5678999999999999999999999999887
Q ss_pred ---------------------HHHHHHHHhhCCCC
Q 036950 370 ---------------------KLDIKKALEIDPDN 383 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~ 383 (469)
...|+++++++|++
T Consensus 280 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 280 FIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 56788888887774
No 165
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.88 E-value=7.8e-05 Score=71.68 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=67.4
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+.+.|..+.. |+|++|+..|++|+.+.+.... ......++.|+|.+|.++|+|++|+.++++++++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34556677888877 8888888888888887753211 1234678999999999999999999999999986
Q ss_pred c-----------------------------HHHHHHHHhhCCCCC
Q 036950 369 D-----------------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 369 d-----------------------------~~~~~~al~l~p~~~ 384 (469)
. +..|++++ ++|+..
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3 56788999 999876
No 166
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.87 E-value=3.4e-05 Score=63.45 Aligned_cols=63 Identities=14% Similarity=-0.100 Sum_probs=55.1
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
..+...|..++..|++.+|+..|++|+.+.+.. ..++.|+|.||.++|++++|+..++++|++
T Consensus 52 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 52 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD---------------IAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 345579999999999999999999999998765 668899999999999999999988887743
No 167
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.87 E-value=0.00017 Score=65.46 Aligned_cols=94 Identities=17% Similarity=0.213 Sum_probs=79.1
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|+|.+|+..|.+++...+.. ..++.++|.+|.++|+|++|+..++++++++
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 122 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSA---------------ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGM 122 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc---------------hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 455678999999999999999999999986644 6788999999999999999999999999987
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
...++++++++|++. .+...+..+......
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~ 174 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDT-----EARFQFGMCLANEGM 174 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccH-----HHHHHHHHHHHHcCC
Confidence 567899999999988 776666666554443
No 168
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.87 E-value=0.00015 Score=70.79 Aligned_cols=91 Identities=9% Similarity=-0.015 Sum_probs=60.9
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc---
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD--- 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d--- 369 (469)
+...|..+++.|+|.+|+..|.+++...+.. ..++.|+|.||.++|+|++|+..++++++++
T Consensus 102 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 102 WQFLGITQAENENEQAAIVALQRCLELQPNN---------------LKALMALAVSYTNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHccccHHHHHHHHHHHHHhCccc
Confidence 3455666666666666666666666654433 5577888888888888888888888888764
Q ss_pred ------------------------------HHHHHHHHhhCCC--CCCcchHHHHHHHHHHHHHHH
Q 036950 370 ------------------------------KLDIKKALEIDPD--NSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 370 ------------------------------~~~~~~al~l~p~--~~~~~~~~~~~~l~~~~~~~~ 403 (469)
+..|+++++++|+ +. .+...+..+.....
T Consensus 167 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~-----~~~~~l~~~~~~~g 227 (365)
T 4eqf_A 167 KYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDP-----DLQTGLGVLFHLSG 227 (365)
T ss_dssp HCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCH-----HHHHHHHHHHHHHT
T ss_pred hHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCH-----HHHHHHHHHHHHCC
Confidence 4567778888888 55 55555555544433
No 169
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.86 E-value=0.00012 Score=75.36 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=64.6
Q ss_pred HHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHH
Q 036950 284 QEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCS 363 (469)
Q Consensus 284 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~ 363 (469)
.+.+..+..+.+....+..+|+|++|+..|++++......-..+ ....+..++|+|.+|..+|+|++|+..+.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 34566777788888889999999999999999999876432111 23357789999999999999999999999
Q ss_pred HHHhhc
Q 036950 364 KVLELD 369 (469)
Q Consensus 364 ~al~~d 369 (469)
++|++.
T Consensus 376 ~aL~i~ 381 (490)
T 3n71_A 376 RMVDGY 381 (490)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
No 170
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.85 E-value=6.6e-05 Score=74.08 Aligned_cols=63 Identities=21% Similarity=0.208 Sum_probs=44.6
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|+.+++.|+|++|+..|++++...|.. ...|.|++.++.++|++++|+..++++++++
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 131 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPDF---------------IDGYINLAAALVAAGDMEGAVQAYVSALQYN 131 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHSCSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45678888888888888888888888876544 3455666666666666666666666666554
No 171
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.84 E-value=6.6e-05 Score=69.76 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=75.7
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc---
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD--- 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d--- 369 (469)
+...|..++..|+|++|+..|.+++...+.. ..++.|+|.||.++|+|++|+.+++++++++
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTR---------------LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 5688999999999999999999999977654 4578999999999999999999999999887
Q ss_pred --------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 370 --------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
...|+++++++|++. .+...+..+...+
T Consensus 142 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~-----~~~~~~~~~~~~~ 189 (272)
T 3u4t_A 142 PKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIY-----IGYLWRARANAAQ 189 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccch-----HHHHHHHHHHHHc
Confidence 567888999999987 6666666555544
No 172
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.83 E-value=0.00017 Score=68.70 Aligned_cols=87 Identities=13% Similarity=-0.009 Sum_probs=71.0
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh-hCHHHHHHHHHHHHh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL-KEYKQAEKLCSKVLE 367 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl-~~~~~ai~~~~~al~ 367 (469)
.+..+.+.|+.+.+.|+|++|+..|.+|+.+.+.... ......++.|+|.+|..+ |+|++|+.++++||+
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~---------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~ 146 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ---------FRRGANFKFELGEILENDLHDYAKAIDCYELAGE 146 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 3566778899999999999999999999988753311 122356889999999995 999999999999998
Q ss_pred hc-----------------------------HHHHHHHHhhCCCCC
Q 036950 368 LD-----------------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 368 ~d-----------------------------~~~~~~al~l~p~~~ 384 (469)
+. +..|++++++.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 147 WYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 74 567899999999876
No 173
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.81 E-value=0.0002 Score=65.67 Aligned_cols=89 Identities=18% Similarity=0.119 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh--hc--
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE--LD-- 369 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~--~d-- 369 (469)
...|..++..|+|++|+..|.+++...+.. ..++.++|.+|.++|+|++|+..++++++ .+
T Consensus 75 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~ 139 (252)
T 2ho1_A 75 AALAVVFQTEMEPKLADEEYRKALASDSRN---------------ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE 139 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc
Confidence 345555666666666666666666554332 34566777777777777777777777776 33
Q ss_pred ---------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 370 ---------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
...|+++++++|++. .+...+..+....
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-----~~~~~la~~~~~~ 188 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQP-----SVALEMADLLYKE 188 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH-----HHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccH-----HHHHHHHHHHHHc
Confidence 455666677777666 5555555544433
No 174
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.79 E-value=9.7e-05 Score=70.35 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=60.6
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|+.++..|+|++|+..|.+|+..+...+. .......+++|+|.||.++|+|++|+.+++++|++.
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~ 226 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD--------NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC--------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc--------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 445778999999999999999999999987754322 134557799999999999999999999999999654
No 175
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.79 E-value=9.9e-06 Score=87.30 Aligned_cols=87 Identities=11% Similarity=0.101 Sum_probs=71.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..+++.|+|++|+..|++|+.+.+.+ ..+|+|+|.||.++|+|++ +.++++||+++
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---------------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~ 532 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGE---------------LAPKLALAATAELAGNTDE-HKFYQTVWSTNDG 532 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc
Confidence 34568999999999999999999999998766 5577888888888888888 88888888877
Q ss_pred ---------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 ---------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
+.+|++|++++|++. .+...+..+.
T Consensus 533 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~-----~a~~~~~~~~ 578 (681)
T 2pzi_A 533 VISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT-----TARLTSAVTL 578 (681)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH-----HHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH-----HHHHHHHHHH
Confidence 567888888889887 6666655553
No 176
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.79 E-value=0.00011 Score=71.46 Aligned_cols=80 Identities=18% Similarity=0.085 Sum_probs=70.8
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|.+|+..|++++...+.. ..++.++|.||.++|+|++|+..++++++++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 128 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH---------------MEAWQYLGTTQAENEQELLAISALRRCLELK 128 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC
Confidence 3445688999999999999999999999976654 5688999999999999999999999999987
Q ss_pred -----------------------HHHHHHHHhhCCCCC
Q 036950 370 -----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~ 384 (469)
+..+++++.++|++.
T Consensus 129 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 129 PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcH
Confidence 677899999999887
No 177
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.79 E-value=7.2e-05 Score=61.81 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=58.2
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..+++.|+|..|+..|.+++...+.. ..++.|+|.||.++|+|++|+.++.++++++
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDGQS---------------VKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHC
Confidence 345678999999999999999999999987754 6689999999999999999999999999987
No 178
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.77 E-value=0.00018 Score=70.87 Aligned_cols=60 Identities=23% Similarity=0.123 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 295 EEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..|+.+...|+|++|+..|.+++...+.. ..+|.|++.+|.++|++++|+..++++++++
T Consensus 140 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 199 (388)
T 1w3b_A 140 DLGNLLKALGRLEEAKACYLKAIETQPNF---------------AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 199 (388)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 34555555555555555555555543322 3344555555555555555555555555444
No 179
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.77 E-value=0.00033 Score=62.47 Aligned_cols=91 Identities=13% Similarity=0.014 Sum_probs=57.8
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh-hCHHHHHHHHHHHHh--hc
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL-KEYKQAEKLCSKVLE--LD 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl-~~~~~ai~~~~~al~--~d 369 (469)
+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+ |+|++|+..++++++ .+
T Consensus 45 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~ 109 (225)
T 2vq2_A 45 WLVRAEIYQYLKVNDKAQESFRQALSIKPDS---------------AEINNNYGWFLCGRLNRPAESMAYFDKALADPTY 109 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCC
Confidence 3445666666666666666666666654432 34567777777777 777777777777776 22
Q ss_pred -----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 370 -----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
...++++++.+|++. .+...+..+.....
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~la~~~~~~~ 161 (225)
T 2vq2_A 110 PTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFP-----PAFKELARTKMLAG 161 (225)
T ss_dssp SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc-----hHHHHHHHHHHHcC
Confidence 456667777777766 55555555544433
No 180
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.77 E-value=5.2e-05 Score=76.80 Aligned_cols=86 Identities=16% Similarity=0.075 Sum_probs=68.3
Q ss_pred CCCCCCEEEEEEEEEecCCcEEecc--ccEEEEECCCccchhHHHHHhcccCCcEEEEEEcCCccccCCCCCCCCCCCCC
Q 036950 66 NPKDLDEVFVKYEVRLEDGTLISKS--DGVEFTVGDGYFCAALAKAVKTMKKGEKVLLTVKPQYAFGKNGRPATGDEDAV 143 (469)
Q Consensus 66 ~~~~gd~V~i~y~~~~~~G~~~~~t--~~~~~~ig~~~~~~gle~aL~gmk~Ge~~~~~ip~~~ayg~~~~~~~~~~~~i 143 (469)
.++.||.|+++|+++ .||..|+++ .++.+.+|++. + |+++|.||++|++..|.+..
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF------------------ 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSREYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY------------------ 211 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE------------------
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee------------------
Confidence 468999999999998 499999976 66777788776 4 99999999999999999843
Q ss_pred CCCceEEEeEeeeeeccccccccchhhhhhh
Q 036950 144 PSNANLHITLEMVSWKTVSDITKDKKVLKKI 174 (469)
Q Consensus 144 p~~~~l~~~v~l~~~~~~~dv~~d~~l~k~i 174 (469)
+|.+..|.|+|.++....-..-|..+.+.+
T Consensus 212 -aGk~a~F~VtV~~Ik~~~lPEldDEfak~~ 241 (433)
T 3gty_X 212 -EGKKYTYKLEVEEVYKRTLPEIGDELAKSV 241 (433)
T ss_dssp -TTEEEEEEEEEEEEEEECCCCSSHHHHHTT
T ss_pred -CCCeEEEEEEEEEEEEecCCcccHHHHHHh
Confidence 256889999999997744334455566554
No 181
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.76 E-value=8.7e-05 Score=70.68 Aligned_cols=96 Identities=21% Similarity=0.080 Sum_probs=72.3
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..+++.|+|++|+..|++++...+....... ......++.|+|.||.++|+|++|+..++++++++
T Consensus 195 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 195 VMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 3457899999999999999999999998753221100 00114588999999999999999999999999876
Q ss_pred ---------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHH
Q 036950 370 ---------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLL 398 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~ 398 (469)
...|+++++++|++. .+...+..+
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~ 313 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT-----FSVTMLGHC 313 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH-----HHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch-----HHHHHHHHH
Confidence 566777777888877 666555544
No 182
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.72 E-value=4.5e-05 Score=61.90 Aligned_cols=88 Identities=20% Similarity=0.218 Sum_probs=61.7
Q ss_pred hcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCC
Q 036950 302 KAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDP 381 (469)
Q Consensus 302 k~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p 381 (469)
..|+|++|+..|++++..-.. .+....++.|+|.||+++|+|++|+..+++++ +++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al-----------~~~p 58 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQ------------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGV-----------KQFP 58 (117)
T ss_dssp -----CCCHHHHHHHHSSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------HHCT
T ss_pred CCCcHHHHHHHHHHHHHcCCC------------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH-----------HhCC
Confidence 358999999999999985210 12236789999999999999999998777766 7789
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 382 DNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 382 ~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
++. .+...+..+...+.+..+... .|.+.+.
T Consensus 59 ~~~-----~~~~~l~~~~~~~g~~~~A~~-~~~~al~ 89 (117)
T 3k9i_A 59 NHQ-----ALRVFYAMVLYNLGRYEQGVE-LLLKIIA 89 (117)
T ss_dssp TCH-----HHHHHHHHHHHHHTCHHHHHH-HHHHHHH
T ss_pred Cch-----HHHHHHHHHHHHcCCHHHHHH-HHHHHHH
Confidence 888 888777777766665554443 3444443
No 183
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.72 E-value=2e-05 Score=68.78 Aligned_cols=107 Identities=11% Similarity=0.075 Sum_probs=75.7
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
.++...++.++..|+|.+|+..|.+++...+.. ..++.++|.||+.+|+|++|+..++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 75 (177)
T 2e2e_A 11 QRQRDPLHQFASQQNPEAQLQALQDKIRANPQN---------------SEQWALLGEYYLWQNDYSNSLLAYRQALQLRG 75 (177)
T ss_dssp CCSSTTTCCCC-----CCCCHHHHHHHHHCCSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhccCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 344456677888999999999999999987755 5688999999999999999999999999887
Q ss_pred -------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 370 -------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 370 -------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
...|+++++++|++. .+...+..+........+.. ..|.+.+.
T Consensus 76 ~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~la~~~~~~g~~~~A~-~~~~~al~ 143 (177)
T 2e2e_A 76 ENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEI-----TALMLLASDAFMQANYAQAI-ELWQKVMD 143 (177)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcH-----HHHHHHHHHHHHcccHHHHH-HHHHHHHh
Confidence 345677777888887 77666666655554443332 23444443
No 184
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.72 E-value=0.00025 Score=65.05 Aligned_cols=108 Identities=16% Similarity=0.100 Sum_probs=80.8
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..++..|+|++|+..|.+++. .+..+ ....++.++|.+|+++|++++|+..++++++++
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~-~~~~~------------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQ-DTLYP------------ERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTT-CTTCT------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh-CccCc------------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 345689999999999999999999998 11111 125678999999999999999999999999887
Q ss_pred ---------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 370 ---------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
...++++++.+|++. .+...+..+........+. .+.+.++..
T Consensus 174 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~A-~~~~~~~~~ 237 (252)
T 2ho1_A 174 QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNA-----RSLLLGIRLAKVFEDRDTA-ASYGLQLKR 237 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCH-----HHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcH-----HHHHHHHHHHHHccCHHHH-HHHHHHHHH
Confidence 567888899999888 7777666665554444332 233444443
No 185
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.71 E-value=0.00022 Score=57.66 Aligned_cols=62 Identities=27% Similarity=0.363 Sum_probs=53.9
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+...|..++..|++.+|+..|.+++...+.. ..++.++|.++..+|+|++|+..++++++..
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 4567888999999999999999999876543 4578899999999999999999999999876
No 186
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.71 E-value=0.00016 Score=61.90 Aligned_cols=83 Identities=17% Similarity=0.196 Sum_probs=64.8
Q ss_pred hcHHHHHHHHhcC---CHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAG---KYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 292 ~~k~~Gn~~fk~~---~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
...+-|..+.+.. ++++|+..++..++.- . + ....-|++|+|.+|+|+++|.+|+.+|+.+|
T Consensus 34 ~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~--~----p-------~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL-- 98 (152)
T 1pc2_A 34 TQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG--S----K-------EEQRDYVFYLAVGNYRLKEYEKALKYVRGLL-- 98 (152)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS--C----H-------HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC--C----c-------cchHHHHHHHHHHHHHccCHHHHHHHHHHHH--
Confidence 3446777888877 6778998888888743 0 0 1235688999999999999999999888776
Q ss_pred cHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 369 DKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 369 d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
+++|+|. +++...+.++++++
T Consensus 99 ---------~ieP~n~-----QA~~Lk~~ie~~~~ 119 (152)
T 1pc2_A 99 ---------QTEPQNN-----QAKELERLIDKAMK 119 (152)
T ss_dssp ---------HHCTTCH-----HHHHHHHHHHHHHH
T ss_pred ---------hcCCCCH-----HHHHHHHHHHHHHH
Confidence 8999999 88888777776654
No 187
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.70 E-value=0.00021 Score=60.70 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=57.3
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..++..|+|.+|+..|.+++...+.. ..++.|+|.||.++|+|++|+..++++++++
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVKVK 111 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999987654 5688999999999999999999999999987
No 188
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.70 E-value=0.00035 Score=58.47 Aligned_cols=74 Identities=19% Similarity=0.125 Sum_probs=59.8
Q ss_pred HHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 287 IEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 287 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
...+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.|+|.+|..+|+|++|+..+++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345667788999999999999999999999998753211 23346688999999999999999999999998
Q ss_pred hhc
Q 036950 367 ELD 369 (469)
Q Consensus 367 ~~d 369 (469)
++.
T Consensus 77 ~~~ 79 (164)
T 3ro3_A 77 LLA 79 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 189
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.69 E-value=0.0003 Score=69.43 Aligned_cols=74 Identities=16% Similarity=0.109 Sum_probs=60.0
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+..+...|..++..|+|..|+..|.+|+.+.+..... ......++.|+|.||..+|+|++|+.++++|++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456677889999999999999999999999988765321 223467888999999999999999999999887
Q ss_pred hc
Q 036950 368 LD 369 (469)
Q Consensus 368 ~d 369 (469)
+.
T Consensus 213 ~~ 214 (383)
T 3ulq_A 213 MA 214 (383)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 190
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.68 E-value=0.00014 Score=72.89 Aligned_cols=81 Identities=26% Similarity=0.287 Sum_probs=71.9
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.+++.|+|.+|+..|++++...+.. ..++.++|.||+++|+|++|+.++++++++
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 89 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 46677889999999999999999999999976654 678899999999999999999999999998
Q ss_pred c-----------------------HHHHHHHHhhCCCCC
Q 036950 369 D-----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~ 384 (469)
+ ...|+++++++|++.
T Consensus 90 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 90 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 7 667888999999864
No 191
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.68 E-value=0.0003 Score=66.85 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=71.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh------
Q 036950 295 EEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL------ 368 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~------ 368 (469)
..|..++..|++++|+..|++++...+.. ..++.++|.+|.++|+|++|+..+++++++
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 228 (330)
T 3hym_B 164 YIGLEYGLTNNSKLAERFFSQALSIAPED---------------PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGN 228 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccc
Confidence 35555666666666666666666554432 567889999999999999999999999985
Q ss_pred ----c----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036950 369 ----D----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIF 417 (469)
Q Consensus 369 ----d----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf 417 (469)
. ...++++++++|++. .+...+..+........+.. ..|.+.+
T Consensus 229 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~-----~~~~~la~~~~~~g~~~~A~-~~~~~al 297 (330)
T 3hym_B 229 EVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA-----STYSAIGYIHSLMGNFENAV-DYFHTAL 297 (330)
T ss_dssp SCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS-----HHHHHHHHHHHHHTCHHHHH-HHHHTTT
T ss_pred cccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch-----HHHHHHHHHHHHhccHHHHH-HHHHHHH
Confidence 2 677888999999998 88888877776665544433 2344444
No 192
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.67 E-value=0.0002 Score=68.03 Aligned_cols=77 Identities=13% Similarity=0.106 Sum_probs=66.0
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
..+...|..+++.|+|++|+..|.+++...+.. ..++.++|.+|.++|+|++|+..++++++++
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 237 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDD---------------AQLWNKLGATLANGNRPQEALDAYNRALDINP 237 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 345578999999999999999999999987654 5678999999999999999999999999886
Q ss_pred ----------------------HHHHHHHHhhCCC
Q 036950 370 ----------------------KLDIKKALEIDPD 382 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~ 382 (469)
...|++++.++|+
T Consensus 238 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 238 GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 5667777888777
No 193
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.66 E-value=0.00014 Score=64.67 Aligned_cols=65 Identities=9% Similarity=0.058 Sum_probs=59.5
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|.+|+..|.+++.+.+.. ..+++|+|.||+++++|++|+.+++++++++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN---------------VKALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 4566789999999999999999999999987654 6789999999999999999999999999998
No 194
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.66 E-value=0.00025 Score=56.99 Aligned_cols=47 Identities=11% Similarity=0.103 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 308 RASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 308 ~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.|+..|.+++...+.+ ..++.|+|.+|+.+|+|++|+..++++++++
T Consensus 3 ~a~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 49 (115)
T 2kat_A 3 AITERLEAMLAQGTDN---------------MLLRFTLGKTYAEHEQFDAALPHLRAALDFD 49 (115)
T ss_dssp CHHHHHHHHHTTTCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 5889999999977755 5689999999999999999999999999877
No 195
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=0.00021 Score=59.49 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=58.8
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
...+...|..+++.++|.+|+..|.+++...+.. ..++.|+|.||.++++|++|+..++++++++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD---------------VKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4556688999999999999999999999987654 5688999999999999999999999999987
No 196
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.65 E-value=0.00015 Score=59.09 Aligned_cols=63 Identities=22% Similarity=0.213 Sum_probs=57.2
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..++..|+|++|+..|.+++...+.. ..++.|+|.||.++++|++|+..++++++++
T Consensus 52 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 52 LYSNRAACYTKLLEFQLALKDCEECIQLEPTF---------------IKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999987654 5688999999999999999999999999987
No 197
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.65 E-value=0.00031 Score=60.58 Aligned_cols=78 Identities=14% Similarity=0.143 Sum_probs=60.0
Q ss_pred hcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHH---HHHHHHHHHHhhcHHHHHHHHh
Q 036950 302 KAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYK---QAEKLCSKVLELDKLDIKKALE 378 (469)
Q Consensus 302 k~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~---~ai~~~~~al~~d~~~~~~al~ 378 (469)
+.+.|++|+..|.+++.+.|.+ ...|+|++.|++.+++++ +|+...++|+ ..|++|++
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~---------------aea~~n~G~~l~~l~~~~~g~~al~~~~eAi----~~le~AL~ 74 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLD---------------ADNLTRWGGVLLELSQFHSISDAKQMIQEAI----TKFEEALL 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH----HHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHhcccchhhhhHhHHHHHH----HHHHHHHH
Confidence 4468999999999999998876 778999999999999875 3444444444 56777778
Q ss_pred hCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 379 IDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 379 l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
++|++. ++.-.+-.+...+.
T Consensus 75 ldP~~~-----~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 75 IDPKKD-----EAVWCIGNAYTSFA 94 (158)
T ss_dssp HCTTCH-----HHHHHHHHHHHHHH
T ss_pred hCcCcH-----HHHHHHHHHHHHhc
Confidence 889888 77777766665553
No 198
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.62 E-value=0.00031 Score=64.91 Aligned_cols=73 Identities=23% Similarity=0.156 Sum_probs=58.6
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.++..|+|.+|+..|.+++.........+ ......++.|+|.||..+|+|++|+..+.+++++
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 355567899999999999999999999998763210000 1334778999999999999999999999999987
No 199
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.62 E-value=0.00034 Score=58.50 Aligned_cols=71 Identities=17% Similarity=0.187 Sum_probs=59.5
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.|+|.+|..+++|++|+..+++++++.
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 445678999999999999999999999998764321 23346789999999999999999999999999653
No 200
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.61 E-value=0.00021 Score=56.51 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=57.0
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..++..|+|.+|+..|.+++...+.. ..++.|+|.||.++|+|++|+..++++++++
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 40 LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW---------------GKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 45678999999999999999999999987654 5688999999999999999999999999987
No 201
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.61 E-value=0.00028 Score=62.98 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=73.6
Q ss_pred hcHHHHHHHHhc-CCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc-
Q 036950 292 KKKEEGNVLFKA-GKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~-~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d- 369 (469)
.+...|..++.. |+|.+|+..|.+++. .+..+. ...++.|+|.||.++|+|++|+..++++++.+
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~------------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 144 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKALA-DPTYPT------------PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP 144 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHT-STTCSC------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCcc------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 345789999999 999999999999998 322211 25678999999999999999999999999987
Q ss_pred ----------------------HHHHHHHHhhCC-CCCCcchHHHHHHHHHHHHHH
Q 036950 370 ----------------------KLDIKKALEIDP-DNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p-~~~~~~~~~~~~~l~~~~~~~ 402 (469)
...++++++++| ++. .+...+..+....
T Consensus 145 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 195 (225)
T 2vq2_A 145 QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQA-----DDLLLGWKIAKAL 195 (225)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCH-----HHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCH-----HHHHHHHHHHHhc
Confidence 567888999999 777 6665555554443
No 202
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.60 E-value=0.00022 Score=70.86 Aligned_cols=64 Identities=20% Similarity=0.111 Sum_probs=58.2
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+.+.|..+++.++|++|+..|++|+.+.+.. ..+|+|+|.||+++++|++|+.++++|++++
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN---------------TKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345678999999999999999999999976654 6789999999999999999999999999998
No 203
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.59 E-value=0.00035 Score=68.91 Aligned_cols=74 Identities=18% Similarity=0.121 Sum_probs=58.1
Q ss_pred HHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 287 IEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 287 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
...+..+...|..++..|+|..|+..|.+|+.+.+..... ......+++|+|.||..+|+|++|+.++.+||
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456677788999999999999999999999987654321 12346778888888888888888888888888
Q ss_pred hh
Q 036950 367 EL 368 (469)
Q Consensus 367 ~~ 368 (469)
++
T Consensus 210 ~~ 211 (378)
T 3q15_A 210 EL 211 (378)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 204
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.59 E-value=0.00014 Score=57.18 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=53.7
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcC--CCCCCHHHHHHHHHHHHHhHhHHHHHHHHh-hCHHHHHHHHHHHHh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGY--DSSFSDEEKQQAKVLKITCNLNNAACKLKL-KEYKQAEKLCSKVLE 367 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~--~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl-~~~~~ai~~~~~al~ 367 (469)
.+...|..++..|+|++|+..|++++...+. . ..++.|+|.||.++ +++++|+.++++++.
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN---------------KDVWAAKADALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC---------------HHHHHHHHHHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch---------------HHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 3457899999999999999999999998765 3 56889999999999 999999998888774
No 205
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.58 E-value=0.00049 Score=63.66 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=68.0
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..++..|+|++|+..|.+++...+.. ..++.|+|.||+++|+|++|+..++++++++
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY---------------NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 143 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccc---------------cHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 45678999999999999999999999987654 5678999999999999999999999999987
Q ss_pred --------------------HHHHHHHHhhCCCCC
Q 036950 370 --------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~ 384 (469)
...+++++...|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (275)
T 1xnf_A 144 DPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQ 178 (275)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCS
T ss_pred ChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcch
Confidence 455677788888776
No 206
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.57 E-value=0.00033 Score=66.61 Aligned_cols=125 Identities=12% Similarity=-0.032 Sum_probs=82.4
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh-
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL- 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~- 368 (469)
+.-+...|..++..++|++|+..|.+|+.+........ ....+++|+|.||..+|+|++|+.++++||+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~---------~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY---------QNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTT---------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHH---------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44455688888889999999999999999654332221 23568999999999999999999999999952
Q ss_pred -----c------------------------HHHHHHHHhhCCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 369 -----D------------------------KLDIKKALEIDPDNSL-EAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 369 -----d------------------------~~~~~~al~l~p~~~~-~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
+ +..+++|+++.++... .....+...+..+..++.+..++....|.+.+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 1 5667777777554420 001144555555555554322334444555555
Q ss_pred hhhhc
Q 036950 419 KINKL 423 (469)
Q Consensus 419 ~~~~~ 423 (469)
-....
T Consensus 266 i~~~~ 270 (293)
T 3u3w_A 266 FFDIL 270 (293)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 44433
No 207
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.57 E-value=0.00026 Score=57.69 Aligned_cols=66 Identities=9% Similarity=0.037 Sum_probs=57.7
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..+++.|+|.+|+..|.+++...+..+. ...++.++|.||.++|++++|+..++++++.+
T Consensus 41 ~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~------------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 41 ALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK------------AAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 4567899999999999999999999998765421 24578999999999999999999999999887
No 208
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.56 E-value=0.00068 Score=67.01 Aligned_cols=71 Identities=17% Similarity=0.093 Sum_probs=59.5
Q ss_pred HHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 287 IEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 287 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
...+..+...|..++..|+|.+|+..|++++...+.+ ......++.++|.||..+|+|++|+.++++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTED-----------LRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccC-----------hhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4557777899999999999999999999999986543 22345678899999999999999999999998
Q ss_pred hh
Q 036950 367 EL 368 (469)
Q Consensus 367 ~~ 368 (469)
++
T Consensus 114 ~~ 115 (411)
T 4a1s_A 114 TL 115 (411)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 209
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.55 E-value=0.0011 Score=62.82 Aligned_cols=73 Identities=12% Similarity=0.148 Sum_probs=59.8
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.++..|+|++|+..|.+|+.+....+.. ..+...+++|+|.||.++|+|++|+.+++++|++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 35566789999999999999999999999776543221 1223478999999999999999999999999976
Q ss_pred c
Q 036950 369 D 369 (469)
Q Consensus 369 d 369 (469)
.
T Consensus 226 ~ 226 (293)
T 2qfc_A 226 S 226 (293)
T ss_dssp H
T ss_pred H
Confidence 4
No 210
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.54 E-value=0.00061 Score=62.00 Aligned_cols=66 Identities=8% Similarity=-0.047 Sum_probs=52.3
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH------------------hh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK------------------LK 353 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k------------------l~ 353 (469)
.+...|..+++.|+|.+|+..|+++++..|..+.. ..++.+++.||.+ ++
T Consensus 43 a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (225)
T 2yhc_A 43 VQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI------------DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQ 110 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH------------HHHHHHHHHHHHHHHC--------------CCH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH------------HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcH
Confidence 45678999999999999999999999988865321 2356777777776 56
Q ss_pred CHHHHHHHHHHHHhhc
Q 036950 354 EYKQAEKLCSKVLELD 369 (469)
Q Consensus 354 ~~~~ai~~~~~al~~d 369 (469)
++++|+..++++++.+
T Consensus 111 ~~~~A~~~~~~~l~~~ 126 (225)
T 2yhc_A 111 QARAAFSDFSKLVRGY 126 (225)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHC
Confidence 8888888888888654
No 211
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.51 E-value=0.0005 Score=70.45 Aligned_cols=126 Identities=13% Similarity=0.023 Sum_probs=86.6
Q ss_pred HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC------------CCCCHHHHHHHHH------HHHHhHhHHHH
Q 036950 286 KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYD------------SSFSDEEKQQAKV------LKITCNLNNAA 347 (469)
Q Consensus 286 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~------------~~~~~e~~~~~~~------l~~~~~~N~a~ 347 (469)
....+..+...|..++..|+|.+|+..|.+++...+.. ....++-...+.. ....++.++|.
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 318 (537)
T 3fp2_A 239 RENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQ 318 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 34456667788888888888888888888888765431 0011111111111 12567899999
Q ss_pred HHHHhhCHHHHHHHHHHHHhhc-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 348 CKLKLKEYKQAEKLCSKVLELD-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 348 ~~~kl~~~~~ai~~~~~al~~d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
||.++|+|++|+..++++++++ ...|+++++++|++. .+...+..+......
T Consensus 319 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~g~ 393 (537)
T 3fp2_A 319 MYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP-----EVPTFFAEILTDRGD 393 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT-----HHHHHHHHHHHHTTC
T ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh-----HHHHHHHHHHHHhCC
Confidence 9999999999999999999987 677899999999998 887777777655544
Q ss_pred HHHHHHHHHHHhh
Q 036950 405 YNKKDVQFYGNIF 417 (469)
Q Consensus 405 ~~~~e~~~~~~mf 417 (469)
..+.. ..|.+++
T Consensus 394 ~~~A~-~~~~~a~ 405 (537)
T 3fp2_A 394 FDTAI-KQYDIAK 405 (537)
T ss_dssp HHHHH-HHHHHHH
T ss_pred HHHHH-HHHHHHH
Confidence 43332 2344443
No 212
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.50 E-value=0.0013 Score=62.05 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=55.0
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+...|..++..|+|.+|+..|++++...+.+ ......++.++|.+|..+|+|++|+..+++++++
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-----------LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 72 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCccc-----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4456678999999999999999999999975543 2234567888888888888888888888888876
No 213
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.50 E-value=0.00041 Score=55.89 Aligned_cols=63 Identities=21% Similarity=0.090 Sum_probs=56.9
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|.++++|++|+..++++++++
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDPAY---------------SKAYGRMGLALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCccC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 45678999999999999999999999986654 5678999999999999999999999999987
No 214
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.48 E-value=0.00037 Score=66.10 Aligned_cols=80 Identities=14% Similarity=0.041 Sum_probs=69.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|.+|+..|++++...+.. ..++.++|.||.++|+|++|+..++++++++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 85 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPER---------------EEAWRSLGLTQAENEKDGLAIIALNHARMLD 85 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 4456788999999999999999999999976654 5678899999999999999999999999887
Q ss_pred -----------------------HHHHHHHHhhCCCCC
Q 036950 370 -----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 -----------------------~~~~~~al~l~p~~~ 384 (469)
...++++++++|++.
T Consensus 86 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 86 PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH
Confidence 567888889999887
No 215
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.45 E-value=0.0012 Score=65.10 Aligned_cols=72 Identities=13% Similarity=-0.031 Sum_probs=60.6
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+..+...|..++..|+|++|+..|.+|+.+.+.... ......++.|+|.||..+|+|++|+.++++|++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34566678999999999999999999999998753311 234577899999999999999999999999998
Q ss_pred h
Q 036950 368 L 368 (469)
Q Consensus 368 ~ 368 (469)
+
T Consensus 251 ~ 251 (378)
T 3q15_A 251 V 251 (378)
T ss_dssp H
T ss_pred H
Confidence 3
No 216
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.44 E-value=0.00052 Score=71.79 Aligned_cols=78 Identities=12% Similarity=0.014 Sum_probs=67.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|..+++.|+|++|+..|++++...+.+ ..++.|+|.||.++|+|++|+..++++++++
T Consensus 59 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 59 AVARLGRVRWTQQRHAEAAVLLQQASDAAPEH---------------PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 45678999999999999999999999987654 6688999999999999999999999999987
Q ss_pred ------------------------HHHHHHHHhhCCCCC
Q 036950 370 ------------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 ------------------------~~~~~~al~l~p~~~ 384 (469)
.+.++++++.+|++.
T Consensus 124 ~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 124 EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCccc
Confidence 345677777777765
No 217
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.43 E-value=0.0012 Score=64.62 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=54.9
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+...|..+++.|+|.+|+..|++++...+.+ ......++.++|.||..+|+|++|+.++++++++
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-----------LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 76 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccc-----------HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4456688999999999999999999999985543 2234567888888888888888888888888876
No 218
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.43 E-value=0.0016 Score=57.29 Aligned_cols=71 Identities=11% Similarity=0.087 Sum_probs=59.7
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|..++..|+|.+|+..|.+++.+...... ......++.|+|.+|..+|+|++|+.++.+++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3556678999999999999999999999998764321 2344678999999999999999999999999987
No 219
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.42 E-value=0.00024 Score=71.80 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=72.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh--CHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK--EYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~--~~~~ai~~~~~al~~d 369 (469)
.+.+.|..++..|+|.+|+..|.+++.+.+....... .....+++|++.++++++ +|++|+.++++||+++
T Consensus 96 ~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~ 168 (472)
T 4g1t_A 96 TWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR-------IESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK 168 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC-------CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc-------hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC
Confidence 3457899999999999999999999998764322110 001457889998888875 6999999999999987
Q ss_pred --------------------------HHHHHHHHhhCCCCCCcchHHHHHHHH
Q 036950 370 --------------------------KLDIKKALEIDPDNSLEAGWGVRMEYK 396 (469)
Q Consensus 370 --------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~ 396 (469)
++.+++|++++|++. .+...+.
T Consensus 169 p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~-----~~~~~l~ 216 (472)
T 4g1t_A 169 PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ-----YLKVLLA 216 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH-----HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch-----HHHHHHH
Confidence 567899999999998 6655544
No 220
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.40 E-value=0.00067 Score=54.64 Aligned_cols=70 Identities=17% Similarity=0.171 Sum_probs=58.9
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..++..|+|.+|+..|.+++...+..... ......++.|+|.+|.++|+|++|+.+++++++++
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 40 YITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED--------YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh--------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 34678999999999999999999999987643211 22336688999999999999999999999999987
No 221
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.39 E-value=0.0018 Score=65.60 Aligned_cols=76 Identities=8% Similarity=-0.043 Sum_probs=60.0
Q ss_pred HHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 287 IEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 287 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
...+..+.+.-..+.++|+|++|+..|++++......-..+ .......+.|+|.+|..+|+|++|+..|.++|
T Consensus 284 ~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L 356 (429)
T 3qwp_A 284 WKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTM 356 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34455666667788899999999999999998654321111 23457889999999999999999999999999
Q ss_pred hhc
Q 036950 367 ELD 369 (469)
Q Consensus 367 ~~d 369 (469)
++.
T Consensus 357 ~i~ 359 (429)
T 3qwp_A 357 EPY 359 (429)
T ss_dssp HHH
T ss_pred HhH
Confidence 875
No 222
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.00047 Score=70.06 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=68.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH---hhCHHHHHHHHHHHHhhc-
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK---LKEYKQAEKLCSKVLELD- 369 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k---l~~~~~ai~~~~~al~~d- 369 (469)
...|..+++.|+|.+|+..|.+++...+..+... ....++.++|.||++ +|+|++|+..++++++++
T Consensus 376 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 446 (514)
T 2gw1_A 376 NFFAEILTDKNDFDKALKQYDLAIELENKLDGIY---------VGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDP 446 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCS---------SCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHH---------HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc
Confidence 3566777777777777777777776655442210 002378999999999 999999999999999887
Q ss_pred ----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 ----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 ----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
...|+++++++|++. .+...+..++
T Consensus 447 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~-----~~~~~~~~~~ 493 (514)
T 2gw1_A 447 RSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTME-----EKLQAITFAE 493 (514)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH-----HHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH-----HHHHHHHHHH
Confidence 677999999999988 7766664443
No 223
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.39 E-value=0.00064 Score=65.17 Aligned_cols=68 Identities=13% Similarity=0.056 Sum_probs=44.4
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+...|+.+...|+|.+|+..|.+++.+.+.... ......+|.|++.||.++|+|++|+.++++||++
T Consensus 38 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 105 (307)
T 2ifu_A 38 EYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRS---------LFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVM 105 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 3344577777788888888888888877643211 1123456667777777777777777777777665
No 224
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.38 E-value=0.00023 Score=73.15 Aligned_cols=65 Identities=15% Similarity=0.109 Sum_probs=58.7
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..+++.|+|++|+..|++|+.+.+.. ..++.|+|.+|.++|+|++|+.++++|++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3445689999999999999999999999986654 6689999999999999999999999999987
No 225
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.37 E-value=0.0011 Score=63.15 Aligned_cols=103 Identities=10% Similarity=0.079 Sum_probs=67.8
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH----hhCHHHHHHHHHHHHhh
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK----LKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k----l~~~~~ai~~~~~al~~ 368 (469)
+...|..+.+.|++++|+..|++++...+.. ...|++.++.. .|+|++|+..++++++.
T Consensus 133 ~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~-----------------~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~ 195 (291)
T 3mkr_A 133 MAMTVQILLKLDRLDLARKELKKMQDQDEDA-----------------TLTQLATAWVSLAAGGEKLQDAYYIFQEMADK 195 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc-----------------HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh
Confidence 3456778888888888888888888765432 12344433333 37888888888888887
Q ss_pred c-----------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036950 369 D-----------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIF 417 (469)
Q Consensus 369 d-----------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf 417 (469)
+ ...|+++++++|+|. ++...+..+.....+..+.-...+.++.
T Consensus 196 ~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~-----~~l~~l~~~~~~~g~~~eaa~~~~~~~~ 262 (291)
T 3mkr_A 196 CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHP-----ETLINLVVLSQHLGKPPEVTNRYLSQLK 262 (291)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6 677888888999888 7776666655554443332233344433
No 226
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.36 E-value=0.00079 Score=53.62 Aligned_cols=63 Identities=27% Similarity=0.366 Sum_probs=56.0
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+...|..++..|+|++|+..|.+++...+.. ..++.++|.+|.++++|++|+..++++++++
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999976543 4578899999999999999999999999987
No 227
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.34 E-value=0.00066 Score=67.11 Aligned_cols=70 Identities=14% Similarity=0.200 Sum_probs=57.3
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+...|..++..|+|++|+..|.+++.+.+.... ......++.|+|.+|+.+|+|++|+..+++++++.
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGD---------RAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 45567899999999999999999999998764211 22345688999999999999999999999998865
No 228
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.32 E-value=0.0017 Score=67.53 Aligned_cols=106 Identities=9% Similarity=-0.027 Sum_probs=78.7
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc--
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD-- 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d-- 369 (469)
.+...|+.+++.|++++|+..|.+++...+.+ ...|++++.+|.+.|++++|+..++++++.+
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 439 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQF---------------GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG 439 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc
Confidence 34457888888899999999999888865543 5578899999999999999999999999876
Q ss_pred ---------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036950 370 ---------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNIFA 418 (469)
Q Consensus 370 ---------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~ 418 (469)
.+.|+++++++|++. .+...+..+..+.....+. .+.|.+|..
T Consensus 440 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~g~~~~A-~~~~~~~~~ 503 (597)
T 2xpi_A 440 THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDP-----LLLNELGVVAFNKSDMQTA-INHFQNALL 503 (597)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh-----HHHHHHHHHHHHhCCHHHH-HHHHHHHHH
Confidence 667888899999988 6666666655444433332 233444443
No 229
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.27 E-value=0.0018 Score=65.54 Aligned_cols=76 Identities=13% Similarity=-0.000 Sum_probs=59.2
Q ss_pred HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHH
Q 036950 286 KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKV 365 (469)
Q Consensus 286 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~a 365 (469)
.+..+....+.+...-+.|+|++|+..|++++......-..+ ....+..++|+|.+|..+|+|++|+..+.++
T Consensus 294 ~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 366 (433)
T 3qww_A 294 MVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKI 366 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 344555666677777778999999999999999775431111 2335778999999999999999999999999
Q ss_pred Hhh
Q 036950 366 LEL 368 (469)
Q Consensus 366 l~~ 368 (469)
|++
T Consensus 367 L~i 369 (433)
T 3qww_A 367 IKP 369 (433)
T ss_dssp HHH
T ss_pred HHH
Confidence 964
No 230
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.26 E-value=0.0038 Score=61.35 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=61.0
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+..+...|..++..|+|++|+..|.+|+.+.+.... ......++.|+|.||..+|+|++|+.++++|++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34556778999999999999999999999998764421 334577899999999999999999999999998
Q ss_pred h
Q 036950 368 L 368 (469)
Q Consensus 368 ~ 368 (469)
+
T Consensus 253 ~ 253 (383)
T 3ulq_A 253 V 253 (383)
T ss_dssp H
T ss_pred H
Confidence 4
No 231
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.23 E-value=0.0021 Score=62.92 Aligned_cols=71 Identities=20% Similarity=0.137 Sum_probs=57.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.|+|.+|..+|+|++|+.++++++++.
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 445667899999999999999999999998765322 22346678899999999999999999999988764
No 232
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.23 E-value=0.0023 Score=66.51 Aligned_cols=122 Identities=9% Similarity=-0.029 Sum_probs=77.0
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCC-------------CHHHHHHHHHH------HHHhHhHHHHHHHHh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSF-------------SDEEKQQAKVL------KITCNLNNAACKLKL 352 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~-------------~~e~~~~~~~l------~~~~~~N~a~~~~kl 352 (469)
.+...|..+.+.|++++|+..|++++...+.+... .++-...++.+ ...+|++++.+|.+.
T Consensus 409 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 488 (597)
T 2xpi_A 409 AWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNK 488 (597)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 45677888888888888888888888765543110 00111111111 134677888888888
Q ss_pred hCHHHHHHHHHHHHhh------c------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 353 KEYKQAEKLCSKVLEL------D------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 353 ~~~~~ai~~~~~al~~------d------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
|++++|+..+++++++ + ...|+++++++|++. .+...+..+....
T Consensus 489 g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~-----~~~~~l~~~~~~~ 563 (597)
T 2xpi_A 489 SDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDA-----NVHTAIALVYLHK 563 (597)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCH-----HHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh-----HHHHHHHHHHHHh
Confidence 8888888888888776 2 566777788888877 7777776666555
Q ss_pred HHHHHHHHHHHHHhhhh
Q 036950 403 REYNKKDVQFYGNIFAK 419 (469)
Q Consensus 403 ~~~~~~e~~~~~~mf~~ 419 (469)
.+..+.. ..|.+++..
T Consensus 564 g~~~~A~-~~~~~~l~~ 579 (597)
T 2xpi_A 564 KIPGLAI-THLHESLAI 579 (597)
T ss_dssp TCHHHHH-HHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHhc
Confidence 4443332 335555443
No 233
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.22 E-value=0.0022 Score=66.04 Aligned_cols=113 Identities=10% Similarity=0.040 Sum_probs=77.4
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+..+.+.|..+...|+|++|+..|+++|......-..+ .+.....++|+|..|..+|+|++|+..+.+||+
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3555667899999999999999999999998764321111 234477899999999999999999999999995
Q ss_pred hcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036950 368 LDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQFYGNI 416 (469)
Q Consensus 368 ~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~m 416 (469)
+ +++ .+.|++. ...++...|..++..++.++..|. +|+++
T Consensus 422 i----~~~--~lG~~Hp--~~~~~~~~l~~~~~e~~~~~~ae~-~~~~~ 461 (490)
T 3n71_A 422 I----LLV--THGPSHP--ITKDLEAMRMQTEMELRMFRQNEF-MYHKM 461 (490)
T ss_dssp H----HHH--HTCTTSH--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred H----HHH--HhCCCCh--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 3 222 3456655 011344455555555555554442 34444
No 234
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.19 E-value=0.0024 Score=60.48 Aligned_cols=67 Identities=12% Similarity=-0.002 Sum_probs=52.0
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
....|..+...|+|++|+..|.+|+.......... ....+++|+|.+|..+|+|++|+.++++|+++
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~ 184 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY---------QNLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTT---------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchH---------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34567777788888888888888887654332211 13568999999999999999999999999954
No 235
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.17 E-value=0.0017 Score=60.95 Aligned_cols=72 Identities=24% Similarity=0.152 Sum_probs=56.9
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+...|+.++..|+|.+|+..|.+++......... -......++.|+|.+|..+|+|++|+..+++++++
T Consensus 69 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 69 ATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGK-------DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 4456679999999999999999999999876321000 01334678899999999999999999999999986
No 236
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.16 E-value=0.0019 Score=60.93 Aligned_cols=71 Identities=20% Similarity=0.137 Sum_probs=58.9
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|++|+..|.+++...+.... ......++.|+|.+|..+|+|++|+..+++++++.
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 253 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 253 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 445667899999999999999999999998753211 23346689999999999999999999999999765
No 237
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.15 E-value=0.00085 Score=67.98 Aligned_cols=83 Identities=12% Similarity=0.017 Sum_probs=64.3
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+.+.|..+...|+|++|+..|+++|......-..+ .......|+|+|..|..+|+|++|+..+.+||++
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 455566899999999999999999999998775321111 2334778999999999999999999999999964
Q ss_pred cHHHHHHHHhhCCCCC
Q 036950 369 DKLDIKKALEIDPDNS 384 (469)
Q Consensus 369 d~~~~~~al~l~p~~~ 384 (469)
- ++ .+.|++.
T Consensus 412 ~----~~--~lG~~Hp 421 (433)
T 3qww_A 412 M----EV--AHGKDHP 421 (433)
T ss_dssp H----HH--HTCTTCH
T ss_pred H----HH--HcCCCCh
Confidence 2 11 3466666
No 238
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.15 E-value=0.0024 Score=58.75 Aligned_cols=73 Identities=16% Similarity=0.008 Sum_probs=58.7
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|+.++..|+|.+|+..|.+++.........+ ......++.|+|.||..+|+|++|+..+++++++
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 455667899999999999999999999999763210000 1234778999999999999999999999999987
No 239
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.13 E-value=0.0019 Score=61.70 Aligned_cols=89 Identities=12% Similarity=0.017 Sum_probs=71.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc----
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD---- 369 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d---- 369 (469)
...|+.+.+.|++++|...|++++...+... ..+|.|++.++.++|++++|+..+++|++++
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 168 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIEDIDP--------------TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 168 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT--------------HHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhccccCc--------------cHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH
Confidence 4678888899999999999999999655431 1278999999999999999999999999864
Q ss_pred --------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHH
Q 036950 370 --------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEK 401 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~ 401 (469)
...|+++++++|++. .+...+..+...
T Consensus 169 ~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~ 215 (308)
T 2ond_A 169 HVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP-----EYVLAYIDYLSH 215 (308)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-----HHHHHHHHHHHH
Confidence 567888999999987 666665555433
No 240
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.07 E-value=0.0024 Score=59.87 Aligned_cols=73 Identities=25% Similarity=0.262 Sum_probs=58.7
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+..+...|..++..|+|.+|+..|.+++.........+ ......++.++|.||.++|+|++|+..+++++++.
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD-------DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT-------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44556789999999999999999999999754321111 12346789999999999999999999999999763
No 241
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.02 E-value=0.0065 Score=53.14 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=59.9
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..+...|..++..|+|.+|+..|.+++.+....... ......++.|+|.+|..+|+|++|+..+++++++
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED--------PLAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc--------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45556789999999999999999999999987533211 1234678999999999999999999999999965
Q ss_pred c
Q 036950 369 D 369 (469)
Q Consensus 369 d 369 (469)
.
T Consensus 137 ~ 137 (203)
T 3gw4_A 137 A 137 (203)
T ss_dssp H
T ss_pred H
Confidence 3
No 242
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.02 E-value=0.008 Score=57.30 Aligned_cols=68 Identities=18% Similarity=0.327 Sum_probs=58.8
Q ss_pred hcCCH-------HHHHHHHHHHHH-HhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc----
Q 036950 302 KAGKY-------ERASKRYEQAVN-YIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD---- 369 (469)
Q Consensus 302 k~~~~-------~~A~~~Y~~al~-~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d---- 369 (469)
+.|++ ++|+..|.+|+. +.+.. ..+|.|++..+.++|++++|+..++++|+++
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP 133 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHTTTTTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT
T ss_pred hccchhhcccchHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCc
Confidence 46876 999999999999 45544 6689999999999999999999999999876
Q ss_pred --------------------HHHHHHHHhhCCCCC
Q 036950 370 --------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~ 384 (469)
+..|++|++++|.+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 168 (308)
T 2ond_A 134 TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 168 (308)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCT
T ss_pred cHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH
Confidence 567888999999877
No 243
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.88 E-value=0.0025 Score=60.49 Aligned_cols=99 Identities=12% Similarity=-0.052 Sum_probs=61.9
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCC-------------CCHHHHHHHH------HHHHHhHhHHHHHHHHh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSS-------------FSDEEKQQAK------VLKITCNLNNAACKLKL 352 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~-------------~~~e~~~~~~------~l~~~~~~N~a~~~~kl 352 (469)
.+...|..+.+.|++++|+..|.+++...+.... ..++....++ +-...+++|+|.+|+.+
T Consensus 153 a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~ 232 (287)
T 3qou_A 153 IGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQV 232 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 3457899999999999999999998776542100 0000011111 11234667777777777
Q ss_pred hCHHHHHHHHHHHHhhcHHHHHHHHhhCCCC--CCcchHHHHHHHHHHHHHHHHHH
Q 036950 353 KEYKQAEKLCSKVLELDKLDIKKALEIDPDN--SLEAGWGVRMEYKLLKEKVREYN 406 (469)
Q Consensus 353 ~~~~~ai~~~~~al~~d~~~~~~al~l~p~~--~~~~~~~~~~~l~~~~~~~~~~~ 406 (469)
|++++|+..+.++ ++++|++ . .++..+..+...+....
T Consensus 233 g~~~~A~~~l~~~-----------l~~~p~~~~~-----~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 233 GRNEEALELLFGH-----------LRXDLTAADG-----QTRXTFQEILAALGTGD 272 (287)
T ss_dssp TCHHHHHHHHHHH-----------HHHCTTGGGG-----HHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHH-----------Hhcccccccc-----hHHHHHHHHHHHcCCCC
Confidence 7777776655554 5788887 5 67777777766654433
No 244
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.84 E-value=0.0021 Score=64.98 Aligned_cols=84 Identities=11% Similarity=-0.041 Sum_probs=64.7
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..+..+.+.|..+...|+|++|+..|.++|......-... .+.....++|+|..|..+|+|++|+..+.+||+
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3455667889999999999999999999998764321111 234578899999999999999999999999995
Q ss_pred hcHHHHHHHHhhCCCCC
Q 036950 368 LDKLDIKKALEIDPDNS 384 (469)
Q Consensus 368 ~d~~~~~~al~l~p~~~ 384 (469)
+ +++ .+.|++.
T Consensus 400 i----~~~--~lG~~Hp 410 (429)
T 3qwp_A 400 I----MRV--THGREHS 410 (429)
T ss_dssp H----HHH--HTCTTSH
T ss_pred H----HHH--hcCCCCh
Confidence 3 222 3566666
No 245
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.72 E-value=0.01 Score=55.05 Aligned_cols=31 Identities=13% Similarity=-0.038 Sum_probs=18.7
Q ss_pred HHhHhHHHHHHHH----hhCHHHHHHHHHHHHhhc
Q 036950 339 ITCNLNNAACKLK----LKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 339 ~~~~~N~a~~~~k----l~~~~~ai~~~~~al~~d 369 (469)
..++.|++.+|.. .+++++|+..++++++.+
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC
Confidence 3455566666666 666666666666666554
No 246
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.70 E-value=0.01 Score=62.23 Aligned_cols=90 Identities=12% Similarity=0.017 Sum_probs=75.6
Q ss_pred cHHHHHHHHhcCC----------HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh--CHHHHHH
Q 036950 293 KKEEGNVLFKAGK----------YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK--EYKQAEK 360 (469)
Q Consensus 293 ~k~~Gn~~fk~~~----------~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~--~~~~ai~ 360 (469)
+..+|..+.+.++ |++|+..|.+++...+.. ..+|.+|+.++.+++ +|++++.
T Consensus 66 W~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~---------------y~aW~hR~w~l~~l~~~~~~~el~ 130 (567)
T 1dce_A 66 WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---------------YGTWHHRCWLLSRLPEPNWARELE 130 (567)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTCSSCCHHHHHH
T ss_pred HHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcccccHHHHHH
Confidence 3456777777777 999999999999987765 779999999999999 7899999
Q ss_pred HHHHHHhhc------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 361 LCSKVLELD------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 361 ~~~~al~~d------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
+|+++|++| ++.+.++++.+|+|. .+...+..+-..+
T Consensus 131 ~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~-----saW~~r~~ll~~l 191 (567)
T 1dce_A 131 LCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY-----SSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH-----HHHHHHHHHHHHH
T ss_pred HHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc-----cHHHHHHHHHHhh
Confidence 999999999 456788899999999 7777777765554
No 247
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.66 E-value=0.0075 Score=46.93 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=51.6
Q ss_pred hhcHHHHHHHHhcCC---HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 291 GKKKEEGNVLFKAGK---YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~---~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
..+-..|..++-.++ ..+|...+.+|+.+.+.+ ...+..+|..+++.|+|++|+..++++|
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~---------------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN---------------EAALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345577888875555 799999999999998876 7788889999999999999999888776
No 248
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.65 E-value=0.0039 Score=51.35 Aligned_cols=51 Identities=22% Similarity=0.356 Sum_probs=43.3
Q ss_pred HHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 338 KITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 338 ~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
..-|++.+|.+|+|+|+|..|+.+|+.+| +++|+|. ++......+++++.+
T Consensus 73 ~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL-----------~~eP~n~-----QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 73 QRDYVFYLAVGNYRLKEYEKALKYVRGLL-----------QTEPQNN-----QAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------HHCTTCH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH-----------HhCCCCH-----HHHHHHHHHHHHHHh
Confidence 45678999999999999999999988776 8999999 888888887776543
No 249
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.60 E-value=0.01 Score=49.13 Aligned_cols=51 Identities=20% Similarity=0.324 Sum_probs=43.1
Q ss_pred HHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHH
Q 036950 338 KITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVRE 404 (469)
Q Consensus 338 ~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~ 404 (469)
..-|++-+|.+|.|+|+|..|..+|+.+| +++|+|. ++......+++++.+
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL-----------~~eP~N~-----QA~~Lk~~Ie~ki~k 127 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLF-----------EHERNNK-----QVGALKSMVEDKIQK 127 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHH-----------TTCTTCH-----HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHH-----------hhCCCCH-----HHHHHHHHHHHHHHh
Confidence 35678899999999999999999998776 8999999 888777777776654
No 250
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.53 E-value=0.014 Score=48.90 Aligned_cols=49 Identities=20% Similarity=0.310 Sum_probs=41.7
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
.-|++.+|.+|+|+++|..|..+|+..| +++|+|. ++......+++++.
T Consensus 77 RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL-----------~~eP~n~-----QA~~Lk~~Ie~~i~ 125 (144)
T 1y8m_A 77 RECLYYLTIGCYKLGEYSMAKRYVDTLF-----------EHERNNK-----QVGALKSMVEDKIQ 125 (144)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHH-----------HTCCCCH-----HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHH-----------hcCCCcH-----HHHHHHHHHHHHHH
Confidence 4578899999999999999999998876 8999999 88877777766653
No 251
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.53 E-value=0.012 Score=61.67 Aligned_cols=100 Identities=13% Similarity=-0.017 Sum_probs=79.3
Q ss_pred HHHHHHhhhcHHHHHHHHhcCCH-HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhC--------
Q 036950 284 QEKIEAAGKKKEEGNVLFKAGKY-ERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKE-------- 354 (469)
Q Consensus 284 ~e~~~~a~~~k~~Gn~~fk~~~~-~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~-------- 354 (469)
..|++.-..+......+.+.+.| ++|+..|.++|...+.. ..+|++|+.|+.++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~---------------~taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDF---------------ATLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchh---------------HHHHHHHHHHHHhcccccchhhhh
Confidence 34444444444555556666665 57799999999988876 8899999999999999
Q ss_pred --HHHHHHHHHHHHhhc-------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHH
Q 036950 355 --YKQAEKLCSKVLELD-------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVR 403 (469)
Q Consensus 355 --~~~ai~~~~~al~~d-------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~ 403 (469)
|++++..++++|+.+ ++.+.+++++||.|. .+.....-+-..+.
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~-----~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF-----HCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc-----cHHHHHHHHHHHcC
Confidence 999999999999998 678999999999999 77776666655543
No 252
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.52 E-value=0.0043 Score=48.50 Aligned_cols=31 Identities=23% Similarity=0.131 Sum_probs=27.4
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..++.|+|.||+++|+|++|+..++++++++
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 37 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETD 37 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 5678999999999999999999888888655
No 253
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.49 E-value=0.0091 Score=51.66 Aligned_cols=99 Identities=12% Similarity=0.089 Sum_probs=64.6
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCC--------------HHHHHHHHH------HHHHhHhHHHHHHH
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFS--------------DEEKQQAKV------LKITCNLNNAACKL 350 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~--------------~e~~~~~~~------l~~~~~~N~a~~~~ 350 (469)
..+...|..+++.|++++|+..|++++...+ ++... .+....++. -...++.|+|.++.
T Consensus 41 ~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~ 119 (176)
T 2r5s_A 41 DVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYN 119 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3456789999999999999999999887654 21100 000111111 12457888899999
Q ss_pred HhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCC-CcchHHHHHHHHHHHHHHHHH
Q 036950 351 KLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNS-LEAGWGVRMEYKLLKEKVREY 405 (469)
Q Consensus 351 kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~-~~~~~~~~~~l~~~~~~~~~~ 405 (469)
++|+|++|+..++++| +++|+.. . .+...+..+...+...
T Consensus 120 ~~g~~~~A~~~~~~~l-----------~~~p~~~~~----~a~~~l~~~~~~~g~~ 160 (176)
T 2r5s_A 120 QVGRDEEALELLWNIL-----------KVNLGAQDG----EVKKTFMDILSALGQG 160 (176)
T ss_dssp HTTCHHHHHHHHHHHH-----------TTCTTTTTT----HHHHHHHHHHHHHCSS
T ss_pred HcccHHHHHHHHHHHH-----------HhCcccChH----HHHHHHHHHHHHhCCC
Confidence 9999999987776665 6777753 0 4666666665554433
No 254
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.48 E-value=0.0087 Score=55.52 Aligned_cols=30 Identities=27% Similarity=0.238 Sum_probs=17.4
Q ss_pred HhHhHHHHHHHH----hhCHHHHHHHHHHHHhhc
Q 036950 340 TCNLNNAACKLK----LKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 340 ~~~~N~a~~~~k----l~~~~~ai~~~~~al~~d 369 (469)
.++.|++.+|.+ .+++++|+..++++++.+
T Consensus 183 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 216 (273)
T 1ouv_A 183 PGCFNAGNMYHHGEGATKNFKEALARYSKACELE 216 (273)
T ss_dssp HHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC
Confidence 345556666666 566666666666655554
No 255
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.37 E-value=0.011 Score=50.99 Aligned_cols=75 Identities=20% Similarity=0.147 Sum_probs=50.1
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHH--------HHH-HH-HHHHHHhHhHHHHHHHHhhCHHHHH
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDE--------EKQ-QA-KVLKITCNLNNAACKLKLKEYKQAE 359 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e--------~~~-~~-~~l~~~~~~N~a~~~~kl~~~~~ai 359 (469)
++.+--.|+.+|..++|.+|...|++||..........-. ... .. ..--..+.+-+|.||++++++++||
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 4455678999999999999999999999877643211000 000 00 0001235667899999999999999
Q ss_pred HHHHH
Q 036950 360 KLCSK 364 (469)
Q Consensus 360 ~~~~~ 364 (469)
...+.
T Consensus 143 ~~Le~ 147 (167)
T 3ffl_A 143 AILDG 147 (167)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 87553
No 256
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.23 E-value=0.01 Score=53.40 Aligned_cols=62 Identities=19% Similarity=0.194 Sum_probs=47.8
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh----CHHHHHHHHHHH
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK----EYKQAEKLCSKV 365 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~----~~~~ai~~~~~a 365 (469)
+..+...|..++..+++.+|+..|++|+..-. ..+++|++.+|.. + ++++|+..+.++
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~-----------------~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A 79 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGD-----------------GDALALLAQLKIR-NPQQADYPQARQLAEKA 79 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHTTS-STTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHH
Confidence 44566889999999999999999999987421 4566777777777 6 777777777777
Q ss_pred Hhhc
Q 036950 366 LELD 369 (469)
Q Consensus 366 l~~d 369 (469)
++..
T Consensus 80 ~~~g 83 (212)
T 3rjv_A 80 VEAG 83 (212)
T ss_dssp HHTT
T ss_pred HHCC
Confidence 7655
No 257
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=96.17 E-value=0.037 Score=53.10 Aligned_cols=54 Identities=20% Similarity=0.192 Sum_probs=38.4
Q ss_pred HhcCCH-HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh--CHHHHHHHHHHHHhhc
Q 036950 301 FKAGKY-ERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK--EYKQAEKLCSKVLELD 369 (469)
Q Consensus 301 fk~~~~-~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~--~~~~ai~~~~~al~~d 369 (469)
.+.+.| ++|+..|.++|.+.|.. .+++++|+.+...++ .+++++..++.+|..+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~nP~~---------------~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~n 99 (306)
T 3dra_A 43 MKAEEYSERALHITELGINELASH---------------YTIWIYRFNILKNLPNRNLYDELDWCEEIALDN 99 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHC
T ss_pred HHcCCCCHHHHHHHHHHHHHCcHH---------------HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHC
Confidence 344454 57888888888777665 667777777777777 7777777777777666
No 258
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.10 E-value=0.022 Score=43.59 Aligned_cols=46 Identities=11% Similarity=0.072 Sum_probs=33.5
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHH-HHHHHHHHHHHHH
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWG-VRMEYKLLKEKVR 403 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~-~~~~l~~~~~~~~ 403 (469)
..++|.++++.++|++|+..+++++ +++|++. . +...+..+.....
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al-----------~~~p~~~-----~~~~~~lg~~~~~~~ 49 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFL-----------QTEPVGK-----DEAYYLMGNAYRKLG 49 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHH-----------HHCSSTH-----HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH-----------HHCCCcH-----HHHHHHHHHHHHHcC
Confidence 4688999999999999999888777 5566666 5 5555555544443
No 259
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.07 E-value=0.024 Score=53.71 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=48.9
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
.....|..+++.++|.+|+..|+.++..-. ..+...+++|++.++..+|++++|+..+++++
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d-------------~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPD-------------KFLAGAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCC-------------cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 446778899999999999999987765321 11234578999999999999999999999987
No 260
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.91 E-value=0.098 Score=50.64 Aligned_cols=70 Identities=13% Similarity=0.036 Sum_probs=48.7
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+..+...|..++..|+|..|...|.+++...+.... ......+++|++.+|..+|+|.+|+..+++++++
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV---------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 344556788888888888888888888887654321 1122455677777777788888887777777764
No 261
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=95.86 E-value=0.053 Score=52.56 Aligned_cols=27 Identities=11% Similarity=-0.164 Sum_probs=20.6
Q ss_pred HHHHHhcCCHH-HHHHHHHHHHHHhcCC
Q 036950 297 GNVLFKAGKYE-RASKRYEQAVNYIGYD 323 (469)
Q Consensus 297 Gn~~fk~~~~~-~A~~~Y~~al~~~~~~ 323 (469)
-....+.|.|. +|+..+.++|.+.|..
T Consensus 36 ~~~~~~~~e~s~eaL~~t~~~L~~nP~~ 63 (331)
T 3dss_A 36 VFQKRQAGELDESVLELTSQILGANPDF 63 (331)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHCchh
Confidence 33344678877 7999999999988765
No 262
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=95.86 E-value=0.091 Score=51.27 Aligned_cols=98 Identities=16% Similarity=0.084 Sum_probs=74.7
Q ss_pred HhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh-CHHHHHHHHHHHHhhc----------
Q 036950 301 FKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK-EYKQAEKLCSKVLELD---------- 369 (469)
Q Consensus 301 fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~-~~~~ai~~~~~al~~d---------- 369 (469)
-+.+...+|+..+.++|.+.+.. ..++++|..+...++ .+++++..++.+|..+
T Consensus 65 ~~~e~se~AL~lt~~~L~~nP~~---------------ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR 129 (349)
T 3q7a_A 65 AKEEKSERALELTEIIVRMNPAH---------------YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHR 129 (349)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 34455679999999999988876 789999999999999 5999999999999988
Q ss_pred ---------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH-------HHHHHHHHHhhh
Q 036950 370 ---------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN-------KKDVQFYGNIFA 418 (469)
Q Consensus 370 ---------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~-------~~e~~~~~~mf~ 418 (469)
++.+.++++++|.|. .+.....-+-..+.... ..+-..+.+++.
T Consensus 130 ~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy-----~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~ 195 (349)
T 3q7a_A 130 LLLLDRISPQDPVSEIEYIHGSLLPDPKNY-----HTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLR 195 (349)
T ss_dssp HHHHHHHCCSCCHHHHHHHHHHTSSCTTCH-----HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHH
Confidence 445778888999999 77766666655554443 244444455444
No 263
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.85 E-value=0.025 Score=55.99 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=57.0
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCH--HHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSD--EEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~--e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..++|..+++.|+|.+|++.|.++++..+....... ............++.|++.+|.++|+|++|+..+.+++.+.
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 346788899999999999999999997765422110 00011122335577999999999999999999999998764
No 264
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=95.79 E-value=0.059 Score=51.70 Aligned_cols=62 Identities=8% Similarity=-0.203 Sum_probs=45.9
Q ss_pred cHHHHHHHHhcC--CHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHH----HHh---hCHHHHHHHHH
Q 036950 293 KKEEGNVLFKAG--KYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACK----LKL---KEYKQAEKLCS 363 (469)
Q Consensus 293 ~k~~Gn~~fk~~--~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~----~kl---~~~~~ai~~~~ 363 (469)
+..+|..+...+ +|.+|+..+.++|...|.. ..++++|..+. .++ +++++++..|+
T Consensus 70 Wn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~---------------y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~ 134 (306)
T 3dra_A 70 WIYRFNILKNLPNRNLYDELDWCEEIALDNEKN---------------YQIWNYRQLIIGQIMELNNNDFDPYREFDILE 134 (306)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC---------------CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHCccc---------------HHHHHHHHHHHHHHHHhccccCCHHHHHHHHH
Confidence 446888888888 9999999999999987765 44566666666 555 56666666666
Q ss_pred HHHhhc
Q 036950 364 KVLELD 369 (469)
Q Consensus 364 ~al~~d 369 (469)
++|+.+
T Consensus 135 ~~l~~~ 140 (306)
T 3dra_A 135 AMLSSD 140 (306)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 666666
No 265
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=95.76 E-value=0.04 Score=56.07 Aligned_cols=81 Identities=17% Similarity=0.050 Sum_probs=54.8
Q ss_pred HHhHhHHHHHHHH----hhCHHHHHHHHHHHHhhc-------------------------HHHHHHHHhhCCC---CCCc
Q 036950 339 ITCNLNNAACKLK----LKEYKQAEKLCSKVLELD-------------------------KLDIKKALEIDPD---NSLE 386 (469)
Q Consensus 339 ~~~~~N~a~~~~k----l~~~~~ai~~~~~al~~d-------------------------~~~~~~al~l~p~---~~~~ 386 (469)
..+++|++.+|.. .+++++|+..++++++.. ...|++|++.+|+ +.
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~-- 440 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTE-- 440 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHH--
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCH--
Confidence 4578899999999 889999999999998875 5668888888854 55
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhchhhh
Q 036950 387 AGWGVRMEYKLLKEKVREYNKKDVQFYGNIFAKINKLEQAK 427 (469)
Q Consensus 387 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~mf~~~~~~~~~~ 427 (469)
.+...+..+... ...+..++..++|.+........
T Consensus 441 ---~a~~~l~~~~~~---~~~~a~~~a~~~~~~~~~~~~~~ 475 (490)
T 2xm6_A 441 ---NRNITEKKLTAK---QLQQAELLSQQYIEKYAPEAWAR 475 (490)
T ss_dssp ---HHHHHHTTSCHH---HHHHHHHHHHHHHHHHCHHHHHH
T ss_pred ---HHHHHHHhcCHh---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555554332 22333345667777655444333
No 266
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.68 E-value=0.034 Score=63.27 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=38.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+...|+.++..|+|++|+..|++|- .|..+|.||.++|+|+.|++.+.+|...
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 34568999999999999999998863 2455666666666666666666666443
No 267
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.68 E-value=0.083 Score=54.26 Aligned_cols=61 Identities=16% Similarity=0.322 Sum_probs=43.4
Q ss_pred HHHHHHHHh-------cCCHH-------HHHHHHHHHHH-HhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHH
Q 036950 294 KEEGNVLFK-------AGKYE-------RASKRYEQAVN-YIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQA 358 (469)
Q Consensus 294 k~~Gn~~fk-------~~~~~-------~A~~~Y~~al~-~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~a 358 (469)
...|..+.+ .|++. +|+..|.+|+. +.+.. ..++.+++..+.++|++++|
T Consensus 276 ~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~---------------~~l~~~~~~~~~~~g~~~~A 340 (530)
T 2ooe_A 276 YEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMKYEKV 340 (530)
T ss_dssp HHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC---------------HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCCHHHH
Confidence 356666665 78987 99999999997 66644 45666666666667777777
Q ss_pred HHHHHHHHhhc
Q 036950 359 EKLCSKVLELD 369 (469)
Q Consensus 359 i~~~~~al~~d 369 (469)
+..++++|+++
T Consensus 341 ~~~~~~al~~~ 351 (530)
T 2ooe_A 341 HSIYNRLLAIE 351 (530)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHhCcc
Confidence 77666666654
No 268
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=95.64 E-value=0.13 Score=49.74 Aligned_cols=77 Identities=12% Similarity=0.028 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh--CHHHHHHHHHHHHhhc--------------
Q 036950 306 YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK--EYKQAEKLCSKVLELD-------------- 369 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~--~~~~ai~~~~~al~~d-------------- 369 (469)
+.+++..+..++...|.+ ..++++|+.+..+++ .|++++..|+++|+.|
T Consensus 90 l~~EL~~~~~~L~~~PKn---------------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl 154 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKS---------------YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 154 (331)
T ss_dssp HHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 788999999999877655 789999999999999 4999999999999999
Q ss_pred ----------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHH
Q 036950 370 ----------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKV 402 (469)
Q Consensus 370 ----------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~ 402 (469)
++.+.++++.+|+|. .+...+..+-..+
T Consensus 155 ~~l~~~~~eel~~~~~~I~~~p~N~-----SAW~~R~~ll~~l 192 (331)
T 3dss_A 155 AQAAVAPAEELAFTDSLITRNFSNY-----SSWHYRSCLLPQL 192 (331)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCSCCH-----HHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHh
Confidence 567888999999999 7776666655544
No 269
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.45 E-value=0.039 Score=56.81 Aligned_cols=88 Identities=13% Similarity=0.015 Sum_probs=66.3
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc----
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD---- 369 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d---- 369 (469)
...|+.+.+.|++++|...|++++...+..+ ..+|.|.+.++.++|++++|+..+++|++..
T Consensus 325 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~ 390 (530)
T 2ooe_A 325 FAYADYEESRMKYEKVHSIYNRLLAIEDIDP--------------TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 390 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSSCH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhCccccCc--------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCch
Confidence 3567778889999999999999999654320 1378888888888888888888888888643
Q ss_pred --------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHH
Q 036950 370 --------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKE 400 (469)
Q Consensus 370 --------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~ 400 (469)
...|+++++.+|++. .+...+..+..
T Consensus 391 ~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~-----~~~~~~~~~~~ 436 (530)
T 2ooe_A 391 HVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP-----EYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCH-----HHHHHHHHHHH
Confidence 456777888888877 66655555433
No 270
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.34 E-value=0.014 Score=58.81 Aligned_cols=54 Identities=19% Similarity=0.189 Sum_probs=25.2
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+...|+.||..|+|++|+..|+++ .-|.++|.|+.++|+|++|++.+.+|...
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp -------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 4456677777777777777777655 12455666666666666666666666433
No 271
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.31 E-value=0.013 Score=45.63 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=50.2
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHH
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCS 363 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~ 363 (469)
.+...|..+++.|+|++|+..|++++...+.... ......++.+++.|+..+|+++.|+..++
T Consensus 40 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 40 GYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEH---------VAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTS---------HHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccH---------HHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 4568999999999999999999999998765421 12246788999999999998887765543
No 272
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.09 E-value=0.08 Score=43.94 Aligned_cols=61 Identities=21% Similarity=0.132 Sum_probs=43.5
Q ss_pred hcHHHHHHHHh----cCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH----hhCHHHHHHHHH
Q 036950 292 KKKEEGNVLFK----AGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK----LKEYKQAEKLCS 363 (469)
Q Consensus 292 ~~k~~Gn~~fk----~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k----l~~~~~ai~~~~ 363 (469)
.....|..++. .+++.+|+..|++|.+.- + ...+.|++.+|.. .+++++|+..++
T Consensus 59 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~---------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~ 121 (138)
T 1klx_A 59 GCRFLGDFYENGKYVKKDLRKAAQYYSKACGLN--D---------------QDGCLILGYKQYAGKGVVKNEKQAVKTFE 121 (138)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCC--C---------------HHHHHHHHHHHHCCCCCCcCHHHHHHHHH
Confidence 34466777776 778888888888887641 1 4567788888888 778888888777
Q ss_pred HHHhhc
Q 036950 364 KVLELD 369 (469)
Q Consensus 364 ~al~~d 369 (469)
+|.+..
T Consensus 122 ~Aa~~g 127 (138)
T 1klx_A 122 KACRLG 127 (138)
T ss_dssp HHHHTT
T ss_pred HHHHCC
Confidence 777643
No 273
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.07 E-value=0.056 Score=52.39 Aligned_cols=70 Identities=16% Similarity=0.060 Sum_probs=56.3
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+...|..++..|+|.+|+..|.+++...+...... ......++.|++.+|..+|+|++|+..+.+++++.
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT-------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc-------CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999875322110 01235678999999999999999999999998764
No 274
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=94.95 E-value=0.094 Score=46.83 Aligned_cols=58 Identities=14% Similarity=0.054 Sum_probs=35.1
Q ss_pred cHHHHHHHHhcC----CHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH----hhCHHHHHHHHHH
Q 036950 293 KKEEGNVLFKAG----KYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK----LKEYKQAEKLCSK 364 (469)
Q Consensus 293 ~k~~Gn~~fk~~----~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k----l~~~~~ai~~~~~ 364 (469)
+...|..++. + ++.+|+..|++|++.- . ..+++|++.+|.. .+++.+|+..+.+
T Consensus 53 ~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g--~---------------~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~ 114 (212)
T 3rjv_A 53 LALLAQLKIR-NPQQADYPQARQLAEKAVEAG--S---------------KSGEIVLARVLVNRQAGATDVAHAITLLQD 114 (212)
T ss_dssp HHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHTCGGGSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC--C---------------HHHHHHHHHHHHcCCCCccCHHHHHHHHHH
Confidence 3456666665 5 7777777777776521 1 3455666666665 5566666666666
Q ss_pred HHhh
Q 036950 365 VLEL 368 (469)
Q Consensus 365 al~~ 368 (469)
+++.
T Consensus 115 A~~~ 118 (212)
T 3rjv_A 115 AARD 118 (212)
T ss_dssp HTSS
T ss_pred HHHc
Confidence 6554
No 275
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=94.87 E-value=0.15 Score=49.81 Aligned_cols=86 Identities=9% Similarity=-0.111 Sum_probs=69.8
Q ss_pred HHHHHHHHhcC-CHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh-h-CHHHHHHHHHHHHhhc-
Q 036950 294 KEEGNVLFKAG-KYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL-K-EYKQAEKLCSKVLELD- 369 (469)
Q Consensus 294 k~~Gn~~fk~~-~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl-~-~~~~ai~~~~~al~~d- 369 (469)
.-+|..+...+ .+++|+..+.++|...+.. ..++++|..|..++ + ++++++..|+++|+.|
T Consensus 92 n~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn---------------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dp 156 (349)
T 3q7a_A 92 QYRFSLLTSLNKSLEDELRLMNEFAVQNLKS---------------YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDP 156 (349)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC---------------HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCT
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCC
Confidence 45777787888 5999999999999987765 77899999999998 7 8999999999999988
Q ss_pred ------------------------------HHHHHHHHhhCCCCCCcchHHHHHHHHHHH
Q 036950 370 ------------------------------KLDIKKALEIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 370 ------------------------------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
++.+.++++.+|.|. .+......+-
T Consensus 157 kNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~-----SAW~~R~~lL 211 (349)
T 3q7a_A 157 KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN-----SAWGWRWYLR 211 (349)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHH
Confidence 334567788899988 6655555443
No 276
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=94.83 E-value=0.061 Score=39.92 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=40.0
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK 353 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~ 353 (469)
.+...|..+++.|+|++|+..|.+++...+.. ..++.|++.++.++|
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~---------------~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHhcC
Confidence 34578999999999999999999999987654 567889999988764
No 277
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.74 E-value=0.1 Score=43.21 Aligned_cols=57 Identities=12% Similarity=-0.057 Sum_probs=49.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH----hhCHHHHHHHHHHHHhhc
Q 036950 296 EGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK----LKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 296 ~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k----l~~~~~ai~~~~~al~~d 369 (469)
.|..++..+.+.+|+..|++|.+.- + ...++|++.+|.. .+++.+|+..+++|.+..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g--~---------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN--S---------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLN 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC--C---------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCC
Confidence 6777778888999999999999852 1 6688999999999 899999999999999876
No 278
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.70 E-value=0.11 Score=51.34 Aligned_cols=71 Identities=6% Similarity=0.011 Sum_probs=59.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+.-....|+.++..|+|.+|+..|++++..+....+. .....+++|++.+|+.+++|.+|...+++++.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---------PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 3344578999999999999999999999887654322 2346789999999999999999999999999764
No 279
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.29 E-value=0.18 Score=43.30 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=59.2
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSF-SDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~-~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
+.+....++..+.|+.|+..+..++.+.+.++.. + -.....++..+|.+++..++|..|...+++||++.
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 5688899999999999999999999988665543 3 23456678889999999999999999999999765
No 280
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.94 E-value=0.85 Score=45.03 Aligned_cols=125 Identities=13% Similarity=0.045 Sum_probs=89.9
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC-------CCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHH
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYD-------SSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLC 362 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~-------~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~ 362 (469)
...+-..|......++...|+..|.+|+.+.... ..+-..+...+.+++..+..-++.+++.+|+|.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3445566777778899999999999999987543 123345667888899999999999999999999999999
Q ss_pred HHHHhhc------HHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHH-----HHHHHHHHHhhhh
Q 036950 363 SKVLELD------KLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYN-----KKDVQFYGNIFAK 419 (469)
Q Consensus 363 ~~al~~d------~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~-----~~e~~~~~~mf~~ 419 (469)
..++..+ ...+-+|+....+.. ++...+..++..+.+.. ..-+..|..++..
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~-----~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il~~ 257 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQS-----DALGAYRRVKTTLADDLGIDPGPTLRALNERILRQ 257 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHH-----HHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHH-----HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHcC
Confidence 9999888 334444554455544 66667777766665442 2334556665543
No 281
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=93.56 E-value=0.12 Score=48.79 Aligned_cols=64 Identities=11% Similarity=-0.006 Sum_probs=50.0
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
.....|..+-..|++.+|+..|++++.-- ..+.. ....++|+++|+.++|+.++|...+++++.
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~g~-~~P~~-----------~~da~~~~glaL~~lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEANDSP-AGEAC-----------ARAIAWYLAMARRSQGNESAAVALLEWLQT 236 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTST-TTTTT-----------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhcCC-CCccc-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 44678999999999999999999998421 10111 245779999999999999999887776663
No 282
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=93.53 E-value=0.11 Score=52.39 Aligned_cols=62 Identities=18% Similarity=0.190 Sum_probs=50.9
Q ss_pred EEEecCCcEEEecCCCCCCcEEEEcCCCccchhHHHHHhccccCcEEEEEEcCCCccCCCCCcccccCCCCCceEEEEEE
Q 036950 189 WFKLHDGTVFVKKGHDEEPLFEFKIDEEQVIDGLDRAVKTMKKGEVALVTIEPEYAFGSCSSEKELAIVPANSTLFYEVE 268 (469)
Q Consensus 189 ~~~l~~g~~~d~~~~~~~~p~~~~lG~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ve 268 (469)
.|. .||..|+++. +.++.+.+|.+. + |+.+|.+|++||...|.+.- +|.+..|.|+
T Consensus 166 ~~~-~dG~~~~~~~---~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-----------------aGk~a~F~Vt 221 (433)
T 3gty_X 166 EVY-NEEGKKLTSR---EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-----------------EGKKYTYKLE 221 (433)
T ss_dssp EEE-CTTSCEEEEE---EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-----------------TTEEEEEEEE
T ss_pred EEE-ECCEECcCCC---CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-----------------CCCeEEEEEE
Confidence 555 6899999752 478888999887 4 99999999999999998732 3568999999
Q ss_pred Eeeeee
Q 036950 269 LVSFIK 274 (469)
Q Consensus 269 l~~~~~ 274 (469)
|.++..
T Consensus 222 V~~Ik~ 227 (433)
T 3gty_X 222 VEEVYK 227 (433)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999985
No 283
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.07 E-value=0.28 Score=49.29 Aligned_cols=79 Identities=9% Similarity=0.014 Sum_probs=56.6
Q ss_pred ChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH-------------------hH
Q 036950 282 NTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKIT-------------------CN 342 (469)
Q Consensus 282 ~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~-------------------~~ 342 (469)
....-+..+..+-..|+.+++.|+|+.|++.|.+|... ..|..+-..+.. -.
T Consensus 140 eA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~---------~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l 210 (449)
T 1b89_A 140 AAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANST---------RTWKEVCFACVDGKEFRLAQMCGLHIVVHADEL 210 (449)
T ss_dssp THHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCH---------HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCc---------hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhH
Confidence 34445678888889999999999999999999999432 122221111110 01
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 343 LNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 343 ~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..+..+|.+.|+|++|+..++++|.++
T Consensus 211 ~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 211 EELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 235678999999999999999999988
No 284
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=92.99 E-value=0.18 Score=38.11 Aligned_cols=41 Identities=27% Similarity=0.200 Sum_probs=36.0
Q ss_pred CChHH-HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 281 MNTQE-KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 281 l~~~e-~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
|+..+ .++.|..+-.+|.++=+.|+|.+|+.+|..||.++-
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45556 678899999999999999999999999999999774
No 285
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.06 E-value=0.27 Score=52.78 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=51.6
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHH
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKV 365 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~a 365 (469)
+-.++.-|..+|+|+.|+..-++|+.+.|.. -.+|.+||.||.++|+|+.|+-..+.+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse---------------F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDS---------------FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchh---------------hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4567888889999999999999999999876 678999999999999999999776665
No 286
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=91.95 E-value=0.58 Score=44.72 Aligned_cols=53 Identities=15% Similarity=0.058 Sum_probs=39.7
Q ss_pred HHhcC--CHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 300 LFKAG--KYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 300 ~fk~~--~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+..| +++.|+..|+++....+.. ....+++| |++++|+|++|....+.+++.
T Consensus 186 ~l~~g~~~~q~A~~~f~El~~~~p~~-------------~~~~lLln---~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 186 KFATNKETATSNFYYYEELSQTFPTW-------------KTQLGLLN---LHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHHTCSTTTHHHHHHHHHHTTSCSH-------------HHHHHHHH---HHHHHTCHHHHHHHHHHHHSH
T ss_pred HHHhCCccHHHHHHHHHHHHHhCCCc-------------ccHHHHHH---HHHHcCCHHHHHHHHHHHHHh
Confidence 44445 8999999999987655420 01345566 999999999999999987764
No 287
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=91.39 E-value=0.3 Score=39.48 Aligned_cols=43 Identities=28% Similarity=0.332 Sum_probs=37.5
Q ss_pred cCCChH-HHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 279 WDMNTQ-EKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 279 ~~l~~~-e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
..|+.. +.++.|..+-.++.++=+.++|.+|+.+|..|+.+|-
T Consensus 6 ~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 6 SGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp CCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 356655 7888999999999999999999999999999999874
No 288
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=91.20 E-value=0.87 Score=43.34 Aligned_cols=60 Identities=22% Similarity=0.151 Sum_probs=47.3
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL 352 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl 352 (469)
....|-.+|+.|+|.+|+..|+.+|..++-....+.++..+++++...|.--+-.+.+.+
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl 176 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIEL 176 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345899999999999999999999999987665566777888888777765555555554
No 289
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=91.19 E-value=0.45 Score=48.12 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=46.4
Q ss_pred HHHHHHHHh----cCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH----hhCHHHHHHHHHHH
Q 036950 294 KEEGNVLFK----AGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK----LKEYKQAEKLCSKV 365 (469)
Q Consensus 294 k~~Gn~~fk----~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k----l~~~~~ai~~~~~a 365 (469)
...|..++. .+++.+|+..|++|+..- ...++.|++.+|.+ .+++++|+..+++|
T Consensus 367 ~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~-----------------~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A 429 (490)
T 2xm6_A 367 FNLGNALLQGKGVKKDEQQAAIWMRKAAEQG-----------------LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTA 429 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC-----------------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 345666666 677777777777777631 15578999999999 89999999999999
Q ss_pred Hhhc
Q 036950 366 LELD 369 (469)
Q Consensus 366 l~~d 369 (469)
++.+
T Consensus 430 ~~~~ 433 (490)
T 2xm6_A 430 STND 433 (490)
T ss_dssp HHHH
T ss_pred HHCC
Confidence 9987
No 290
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=91.04 E-value=1.6 Score=41.58 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=49.4
Q ss_pred cHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh
Q 036950 293 KKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK 353 (469)
Q Consensus 293 ~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~ 353 (469)
....|-.+|..|+|.+|+..|+.+|..++-....+.++..+++++...|.--+-.+.+.+.
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~ 165 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETE 165 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999877666778888888888777665555555553
No 291
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.97 E-value=2.4 Score=41.38 Aligned_cols=91 Identities=10% Similarity=0.025 Sum_probs=57.0
Q ss_pred HHHHHHHHhc---CCHHHHHHHHHHHHHHhcCCC-----------------CCCHHHHHHHHHHH------------HHh
Q 036950 294 KEEGNVLFKA---GKYERASKRYEQAVNYIGYDS-----------------SFSDEEKQQAKVLK------------ITC 341 (469)
Q Consensus 294 k~~Gn~~fk~---~~~~~A~~~Y~~al~~~~~~~-----------------~~~~e~~~~~~~l~------------~~~ 341 (469)
.-+|..++.. ..+.+|+.+|++|+...|... .........+.... ..+
T Consensus 200 ~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~ 279 (372)
T 3ly7_A 200 FYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSII 279 (372)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHH
Confidence 3455555543 446899999999999887651 11211111111111 112
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhc----------------------HHHHHHHHhhCCCCC
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELD----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d----------------------~~~~~~al~l~p~~~ 384 (469)
|.=+|.+++..|++++|+..+++||.++ .+.|.+|+.++|...
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 2225556666799999999999999887 566777777777654
No 292
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=90.44 E-value=1.1 Score=45.10 Aligned_cols=31 Identities=3% Similarity=-0.168 Sum_probs=22.2
Q ss_pred HHhHhHHHHHHHH----hhCHHHHHHHHHHHHhhc
Q 036950 339 ITCNLNNAACKLK----LKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 339 ~~~~~N~a~~~~k----l~~~~~ai~~~~~al~~d 369 (469)
...+.|++.+|.. ..++.+|+..+.++.+..
T Consensus 318 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 318 VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 4566777777776 337888888888877664
No 293
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.37 E-value=0.53 Score=35.49 Aligned_cols=42 Identities=26% Similarity=0.230 Sum_probs=36.0
Q ss_pred CCChH-HHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 280 DMNTQ-EKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 280 ~l~~~-e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
-|++. +-++.|..+-.+|.++=+.|+|.+|+.+|..||.++-
T Consensus 8 ~~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 8 HMSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45554 4578999999999999999999999999999999874
No 294
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=90.21 E-value=0.37 Score=36.46 Aligned_cols=41 Identities=22% Similarity=0.254 Sum_probs=35.0
Q ss_pred CChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 281 MNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 281 l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
|+..+.+..|..+-.++.+.=+.|+|.+|+.+|..|+.++-
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 44445677888888999999999999999999999999764
No 295
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.68 E-value=0.37 Score=55.07 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=36.9
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
-+...|..+.+.|+|.+|+..|.+|= + ...|.+.+.|+.++|+|++|+.++..|++.+
T Consensus 1107 vWsqLAKAql~~G~~kEAIdsYiKAd-----D---------------~say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1107 VWSQLAKAQLQKGMVKEAIDSYIKAD-----D---------------PSSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHhcC-----C---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 33456666666666666666666551 1 4456667777777777777777777766443
No 296
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=89.11 E-value=1.8 Score=40.83 Aligned_cols=65 Identities=14% Similarity=0.037 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHh-----hCHHHHHHHHHHHHhhc-----------
Q 036950 306 YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKL-----KEYKQAEKLCSKVLELD----------- 369 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl-----~~~~~ai~~~~~al~~d----------- 369 (469)
...|....++|+.+.+.. +.-.+|.-++..|.++ |+.++|..++++||+++
T Consensus 179 l~~A~a~lerAleLDP~~-------------~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~Y 245 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSY-------------QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITY 245 (301)
T ss_dssp HHHHHHHHHHHHHHCTTH-------------HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCc-------------ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHH
Confidence 567777777777776632 2356888899999996 99999999999999998
Q ss_pred --------------HHHHHHHHhhCCCC
Q 036950 370 --------------KLDIKKALEIDPDN 383 (469)
Q Consensus 370 --------------~~~~~~al~l~p~~ 383 (469)
.+.|++|+..+|..
T Consensus 246 A~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 246 ADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 56788888888874
No 297
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=89.08 E-value=0.83 Score=35.21 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=32.8
Q ss_pred HHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 285 EKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 285 e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
..++.|..+-.+|.++=+.|+|.+|+.+|..|+.++-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3566788888999999999999999999999999875
No 298
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=88.85 E-value=0.86 Score=34.56 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=29.1
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
..|..+-.++.++=+.|+|.+|+.+|..|+.++-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3566677888888999999999999999998874
No 299
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=87.05 E-value=1.4 Score=44.21 Aligned_cols=27 Identities=19% Similarity=0.014 Sum_probs=16.2
Q ss_pred HHhHhHHHHHHHHhh-----CHHHHHHHHHHHH
Q 036950 339 ITCNLNNAACKLKLK-----EYKQAEKLCSKVL 366 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~-----~~~~ai~~~~~al 366 (469)
..+++|++.+|. .| ++.+|+..+.+|+
T Consensus 283 ~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 283 PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 345566666666 34 6666666666666
No 300
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=87.00 E-value=5.1 Score=29.96 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=40.8
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKD 409 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e 409 (469)
+..+|.-.=+.|+|.+|+..+..+| +.|..+++.+|+.. ....++.+..++..+-
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~ai----e~l~~alk~e~d~~---------~k~~ir~K~~eY~~RA 76 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAI----EVLAQLVSLYRDGS---------TAAIYEQMINEYKRRI 76 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH----HHHHHHHHHSTTSS---------THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHH----HHHHHHHHHCCCHH---------HHHHHHHHHHHHHHHH
Confidence 4556677778899999999999999 57888999988876 2344555555555544
No 301
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=86.69 E-value=5.5 Score=29.74 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=42.4
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQ 411 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~ 411 (469)
+..+|.-.=+.|+|.+|+..+..+| +.|..+++.+|+.. ....++.+..++..+-.+
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~ai----e~l~~~lk~e~d~~---------~k~~ir~K~~eY~~RAE~ 70 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAI----EVLSQIIVLYPESV---------ARTAYEQMINEYKKRISY 70 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH----HHHHHHHHHCTTCT---------THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHH----HHHHHHHHHCCCHH---------HHHHHHHHHHHHHHHHHH
Confidence 3455666677899999999999999 57889999998876 344566666666655544
No 302
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=86.66 E-value=3.3 Score=39.38 Aligned_cols=62 Identities=6% Similarity=-0.045 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.-.|..++..|++++|++.|+++|...+.. ....++.-++.+|+++|+.+.|...+++..+.
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~-------------~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~ 165 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAE-------------GTTELLLLAIEVALLNNNVSTASTIFDNYTNA 165 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCST-------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCc-------------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 367888999999999999999997643310 01445566788899999999998888765543
No 303
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=86.48 E-value=1.2 Score=34.55 Aligned_cols=33 Identities=6% Similarity=0.023 Sum_probs=29.1
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYD 323 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~ 323 (469)
.-+...|+.+|+.|++..|+..|++|+.+.|..
T Consensus 47 ~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 47 SVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 344688999999999999999999999988765
No 304
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=86.06 E-value=2.2 Score=41.62 Aligned_cols=58 Identities=7% Similarity=-0.036 Sum_probs=49.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 296 EGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 296 ~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+..++..|+++.|+...++|+.+-++ ...|.-++.++.-.|++++|+..+++|+.++
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln~s----------------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~ 340 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLEMS----------------WLNYVLLGKVYEMKGMNREAADAYLTAFNLR 340 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcCCC----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 555677789999999999999998531 3455667999999999999999999999999
No 305
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.45 E-value=2.2 Score=45.57 Aligned_cols=90 Identities=12% Similarity=0.008 Sum_probs=54.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHH-----hcCCCCCCHHHHHHHHHHH-HHhHhHHHH-HHHHhhCHHHHHHHHHH
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNY-----IGYDSSFSDEEKQQAKVLK-ITCNLNNAA-CKLKLKEYKQAEKLCSK 364 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~-----~~~~~~~~~e~~~~~~~l~-~~~~~N~a~-~~~kl~~~~~ai~~~~~ 364 (469)
.+++.|..+.+.++++.|.++|.++-++ +... ..+.+....+..+. ..-.+|.|. ||+++|++++|++.|.+
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~-~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSS-FNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHH-cCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 3478999999999999999999986322 2111 11222222222222 122345544 89999999999999877
Q ss_pred HHhhcHHHHHHHHhhCCCC
Q 036950 365 VLELDKLDIKKALEIDPDN 383 (469)
Q Consensus 365 al~~d~~~~~~al~l~p~~ 383 (469)
.-+.+ ..+.-|....|..
T Consensus 762 ~~~~~-~A~~lA~~~~~~~ 779 (814)
T 3mkq_A 762 SQRFS-EAAFLGSTYGLGD 779 (814)
T ss_dssp TTCHH-HHHHHHHHTTCCH
T ss_pred cCChH-HHHHHHHHhCCCh
Confidence 55433 3344444555554
No 306
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=84.62 E-value=9.9 Score=28.83 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=33.4
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhC
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEID 380 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~ 380 (469)
+-.+.-+|-.+++-|+|++||.+..+|. ..+..|+++-
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa----~yL~eAmklt 52 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT----TYLSEAMKLT 52 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH----HHHHHHHTTC
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH----HHHHHHHHhh
Confidence 5567788999999999999999999998 5788898887
No 307
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=84.55 E-value=9.7 Score=28.60 Aligned_cols=60 Identities=20% Similarity=0.130 Sum_probs=43.6
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQ 411 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~ 411 (469)
+.-+...|.-.-+.|+|++|+..+..+| +.|..+++.+|+.. ....++.+..++..+..+
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Ai----e~ll~alk~e~d~~---------~k~~lr~K~~eYl~RAE~ 75 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGI----DLLLQVLKGTKDNT---------KRCNLREKISKYMDRAEN 75 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH----HHHHHHHHTCCCHH---------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH----HHHHHHHhhCCCHH---------HHHHHHHHHHHHHHHHHH
Confidence 4445667777788899999999999999 57888888887754 244566666666655433
No 308
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=83.12 E-value=1.8 Score=32.90 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=32.0
Q ss_pred HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 286 KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 286 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
-+..|...-.++..+.+.|+|++||.++.+|..++.
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 456788888899999999999999999999999875
No 309
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=82.90 E-value=9.2 Score=29.18 Aligned_cols=58 Identities=17% Similarity=0.130 Sum_probs=42.0
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQF 412 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~ 412 (469)
+.+.|.-.-+.++|.+|+..+..++ +.|..+++.+|+.. ....++.+..++..+-.++
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Ai----e~l~~alk~e~~~~---------~k~~l~~K~~eYl~RAE~L 75 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGI----DMLLQVLKGTKESS---------KRCVLRTKISGYMDRAENI 75 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH----HHHHHHHHTCCCHH---------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH----HHHHHHHHHCCCHH---------HHHHHHHHHHHHHHHHHHH
Confidence 3455666667799999999999999 57888888887755 3455666666666655543
No 310
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=82.36 E-value=12 Score=29.91 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=42.4
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQF 412 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~ 412 (469)
+.++|.-.-+.++|.+|+..+..++ +.|..+++.++.+. . ....++.+..++..+-..+
T Consensus 21 lv~~Ave~D~ag~y~eAl~lY~~Ai----e~l~~alk~e~~~~-----~---~k~~lr~K~~eYl~RAE~L 79 (117)
T 2cpt_A 21 LASKAAQEDKAGNYEEALQLYQHAV----QYFLHVVKYEAQGD-----K---AKQSIRAKCTEYLDRAEKL 79 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH----HHHHHHHHTSCCCH-----H---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHH----HHHHHHHHhccCCH-----H---HHHHHHHHHHHHHHHHHHH
Confidence 3455555666799999999999999 57888888887666 2 3455666777776665443
No 311
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.86 E-value=9.2 Score=28.89 Aligned_cols=46 Identities=17% Similarity=0.070 Sum_probs=35.3
Q ss_pred HHhHhHHHHHHHHhhC---HHHHHHHHHHHHhhc-----------------------HHHHHHHHhhCCCCC
Q 036950 339 ITCNLNNAACKLKLKE---YKQAEKLCSKVLELD-----------------------KLDIKKALEIDPDNS 384 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~---~~~ai~~~~~al~~d-----------------------~~~~~~al~l~p~~~ 384 (469)
..++..+|.+++..++ ..+|....++||++| +..++++++.+|.+.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 4466778888876665 799999999999888 566777888888744
No 312
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=77.83 E-value=8.1 Score=38.03 Aligned_cols=65 Identities=14% Similarity=0.045 Sum_probs=55.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 295 EEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
..|+-++..|+|.+|+..+++.++.+....+ ..+..-+|+.....|..++++.++...+.+|...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 5789999999999999999999999876422 3566778999999999999999999888887643
No 313
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.41 E-value=3.3 Score=33.04 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=52.8
Q ss_pred HHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcC-------CCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHH
Q 036950 286 KIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGY-------DSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYK 356 (469)
Q Consensus 286 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~-------~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~ 356 (469)
....|-.+.+.|-.+=..|+-+.|+.+|+++|..+.. .+....+.|.....|..+...||..+.-+++...
T Consensus 18 ~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le 95 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILE 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555668888999999999887742 2345678999999999999999999988876443
No 314
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=77.11 E-value=19 Score=26.73 Aligned_cols=57 Identities=19% Similarity=0.196 Sum_probs=39.7
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 036950 343 LNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEKVREYNKKDVQF 412 (469)
Q Consensus 343 ~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~ 412 (469)
.+.|.-.-+.|+|++|+..+..++ +.|..+++.+|+.. ....++.+..++..+-..+
T Consensus 17 ~~~Av~~D~~g~y~eAl~~Y~~ai----e~l~~a~k~e~~~~---------~k~~l~~k~~eYl~RAE~L 73 (85)
T 2v6x_A 17 VQKAIDLDTATQYEEAYTAYYNGL----DYLMLALKYEKNPK---------SKDLIRAKFTEYLNRAEQL 73 (85)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH----HHHHHHHHHCCCHH---------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH----HHHHHHHHhCCCHH---------HHHHHHHHHHHHHHHHHHH
Confidence 445555566799999999999999 46778888886654 3445566666666555443
No 315
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.03 E-value=4.3 Score=40.44 Aligned_cols=65 Identities=14% Similarity=0.052 Sum_probs=54.7
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.+...|.-+++.|+|..|++.|.++...+.... ..+.++++...+++..++|..+....+++-.+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~------------~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG------------AKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC------------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH------------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 356899999999999999999999998876542 23667888889999999999999999998654
No 316
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=73.52 E-value=12 Score=39.73 Aligned_cols=57 Identities=7% Similarity=-0.098 Sum_probs=34.9
Q ss_pred HHHHHHHhcCCHHHHH-HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 295 EEGNVLFKAGKYERAS-KRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~-~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
.-+.-+...++...|+ ..|.+|+..+|.. ..+++..|....+.++++.|...++++|
T Consensus 348 ~ya~~~~~~~~~~~a~r~il~rAi~~~P~s---------------~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 348 NMANYQGEKNTDSTVITKYLKLGQQCIPNS---------------AVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHSCCTTHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3455555677777887 8889998877754 3344455555555555555555555544
No 317
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=73.49 E-value=4 Score=38.45 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=50.3
Q ss_pred hcHHHHHHHHhc-----CCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHH
Q 036950 292 KKKEEGNVLFKA-----GKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKV 365 (469)
Q Consensus 292 ~~k~~Gn~~fk~-----~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~a 365 (469)
.+.-.|.-+.+. |+.++|..+|++||.+.+... +..+...|.-+.. +++++.+...+++|
T Consensus 201 A~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~--------------id~~v~YA~~l~~~~gd~~~a~~~L~kA 266 (301)
T 3u64_A 201 VWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD--------------PDHHITYADALCIPLNNRAGFDEALDRA 266 (301)
T ss_dssp HHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC--------------SHHHHHHHHHTTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC--------------chHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 334567777774 999999999999999987421 3345566777777 49999999999999
Q ss_pred Hhhc
Q 036950 366 LELD 369 (469)
Q Consensus 366 l~~d 369 (469)
|+.+
T Consensus 267 L~a~ 270 (301)
T 3u64_A 267 LAID 270 (301)
T ss_dssp HHCC
T ss_pred HcCC
Confidence 9887
No 318
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=71.96 E-value=21 Score=26.82 Aligned_cols=33 Identities=30% Similarity=0.400 Sum_probs=29.5
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNYI 320 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~ 320 (469)
+.|..+..+|.++|+.++|.+|+..+.++...-
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 567788899999999999999999999999753
No 319
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=71.56 E-value=15 Score=31.62 Aligned_cols=42 Identities=29% Similarity=0.435 Sum_probs=30.9
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhc-------HHHHHHHHhhCCCCC
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELD-------KLDIKKALEIDPDNS 384 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d-------~~~~~~al~l~p~~~ 384 (469)
..--++||.|+++|..|+.+.+..|+-+ -.+++ .+-+||.++
T Consensus 65 ~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~-~ffvd~~Dk 113 (242)
T 3kae_A 65 KYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQ-EMFVDPGDE 113 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHH-TTSCCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccc-eeeeccchH
Confidence 3446899999999999999999999544 11222 334688888
No 320
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=63.36 E-value=40 Score=32.74 Aligned_cols=61 Identities=8% Similarity=-0.053 Sum_probs=50.4
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
.+......+...|+|.+|+....+++...|.+ ..+|.-+..||...|+..+|+..++++-+
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~---------------E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYR---------------EPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34466778889999999999999999887755 45677778999999999999998887653
No 321
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=62.38 E-value=1.6 Score=40.17 Aligned_cols=65 Identities=17% Similarity=0.116 Sum_probs=0.0
Q ss_pred HHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHhHhHHHHH
Q 036950 284 QEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSF-SDEEKQQAKVLKITCNLNNAAC 348 (469)
Q Consensus 284 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~-~~e~~~~~~~l~~~~~~N~a~~ 348 (469)
...+..|..+-.+|.++=+.|+|++|+.+|..|+.++-..-.. .++...+.-.-++.-|++||-.
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~ 82 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 82 (257)
T ss_dssp ------------------------------------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4466778888889999999999999999999999988643221 1222233333345557777743
No 322
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=57.29 E-value=16 Score=26.52 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=30.5
Q ss_pred HHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcC
Q 036950 285 EKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGY 322 (469)
Q Consensus 285 e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~ 322 (469)
++-..-.+--..|-.++..|++++|+.++.+|+..++.
T Consensus 12 ~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 12 AVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 33344445567899999999999999999999998764
No 323
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=55.81 E-value=70 Score=33.73 Aligned_cols=23 Identities=13% Similarity=0.146 Sum_probs=14.4
Q ss_pred HHHHHHhhCHHHHHHHHHHHHhh
Q 036950 346 AACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 346 a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+.-...+++.+.|...+++|+..
T Consensus 511 ~~fe~~~~~~~~AR~lferal~~ 533 (679)
T 4e6h_A 511 LDFLIYVNEESQVKSLFESSIDK 533 (679)
T ss_dssp HHHHHHHTCHHHHHHHHHHHTTT
T ss_pred HHHHHhCCCHHHHHHHHHHHHHh
Confidence 33344566777777777777764
No 324
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=55.72 E-value=49 Score=30.54 Aligned_cols=58 Identities=10% Similarity=0.041 Sum_probs=44.8
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 297 GNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 297 Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
.+.+++.++.+.|+......|+--|.+ +.+..-+..-+.=.|+|+.|...++.+.+++
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~d---------------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~ 61 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKD---------------ASLRSSFIELLCIDGDFERADEQLMQSIKLF 61 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Confidence 367899999999999999999987766 2233333444444699999999999888777
No 325
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=54.57 E-value=21 Score=35.71 Aligned_cols=40 Identities=25% Similarity=0.204 Sum_probs=24.6
Q ss_pred HHHHHHhhhcHHHH----HHHHhcCCHHHHHHHHHHHHHHhcCCC
Q 036950 284 QEKIEAAGKKKEEG----NVLFKAGKYERASKRYEQAVNYIGYDS 324 (469)
Q Consensus 284 ~e~~~~a~~~k~~G----n~~fk~~~~~~A~~~Y~~al~~~~~~~ 324 (469)
.+|+..|+.+++++ |..-. .--++|+.+|++|+.++....
T Consensus 423 ~eKi~~AE~~~~k~e~~~n~~a~-~yA~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 423 QEKIDEAEQLLAKAKGMNNENAI-EYAQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhccCCHHHH-HHHHHHHHHHHHHHHHHHhhh
Confidence 34555555555544 22221 134689999999999997654
No 326
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=50.47 E-value=1.2e+02 Score=28.77 Aligned_cols=25 Identities=8% Similarity=0.056 Sum_probs=15.0
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 343 LNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 343 ~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
.+=|..+++.+++..|.+.|.-.|+
T Consensus 59 ~~GA~~ll~~~Q~~sg~DL~~llve 83 (336)
T 3lpz_A 59 ASVSQTLLRSGQGGSGGDLAVLLVD 83 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcchHHHHHHHHHH
Confidence 4445556666777776666655554
No 327
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=49.83 E-value=65 Score=24.23 Aligned_cols=66 Identities=17% Similarity=0.127 Sum_probs=46.2
Q ss_pred HHhhhcHHHHHHHHhc---CCHHHHHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHhHhHHHHHHHHhh
Q 036950 288 EAAGKKKEEGNVLFKA---GKYERASKRYEQAVNYIGYD----SSFSDEEKQQAKVLKITCNLNNAACKLKLK 353 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~---~~~~~A~~~Y~~al~~~~~~----~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~ 353 (469)
+.|=.+.+.|-..=.. |+-..|+..|++++..+..- .....++|+..+.|..+-..|+..+.-+|.
T Consensus 14 ~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL~ 86 (89)
T 3eab_A 14 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQ 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444555444444 88889999999998877421 122457899999999999999988776653
No 328
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=49.80 E-value=30 Score=26.42 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=32.4
Q ss_pred hHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcC
Q 036950 283 TQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGY 322 (469)
Q Consensus 283 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~ 322 (469)
.+++-..-..--..|-.++..|+++.|+.++.+||..++.
T Consensus 13 ~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 13 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4455555566678999999999999999999999998753
No 329
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=46.93 E-value=66 Score=32.50 Aligned_cols=63 Identities=8% Similarity=-0.038 Sum_probs=54.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
-+--.|.-..-+..+..|...|.+|+...|.. -..|+-+|..+.-.+++-+|+-+|.++|...
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~---------------G~~~nqLavla~~~~~~l~a~y~y~rsl~~~ 216 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSN---------------GQPYNQLAILASSKGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB---------------SHHHHHHHHHHHHTTCHHHHHHHHHHHHSSS
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC---------------CchHHHHHHHHhcccccHHHHHHHHHHHhcC
Confidence 34567888778888999999999999999876 5577888999999999999999999999877
No 330
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=43.70 E-value=1e+02 Score=30.99 Aligned_cols=61 Identities=8% Similarity=-0.040 Sum_probs=47.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 295 EEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 295 ~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
..-+.+.+.|++++|...|.+....-- .++ ...|+-+-.+|.+.|++++|...+++..+..
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~-~Pd-------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G 170 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGI-QPR-------------LRSYGPALFGFCRKGDADKAYEVDAHMVESE 170 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTC-CCC-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCC-CCc-------------cceehHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 345678899999999999998775310 111 5677888889999999999999999988754
No 331
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=43.66 E-value=36 Score=29.24 Aligned_cols=76 Identities=5% Similarity=-0.057 Sum_probs=45.3
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcC----CCCCCHHHHHHHHHHHH-HhHhHH-HHHHHHhhCHHHHHHHHH
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGY----DSSFSDEEKQQAKVLKI-TCNLNN-AACKLKLKEYKQAEKLCS 363 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~----~~~~~~e~~~~~~~l~~-~~~~N~-a~~~~kl~~~~~ai~~~~ 363 (469)
-..++..|....+.|++.-|.++|+++=++-.- ....+.+....+..+.. .--+|+ -.|++-+|++++|++.+.
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~ 113 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFA 113 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHH
Confidence 446889999999999999999999986543210 01111122222211111 112333 567778888888887665
Q ss_pred HH
Q 036950 364 KV 365 (469)
Q Consensus 364 ~a 365 (469)
+.
T Consensus 114 ~~ 115 (177)
T 3mkq_B 114 EG 115 (177)
T ss_dssp HT
T ss_pred HC
Confidence 43
No 332
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=42.88 E-value=58 Score=29.83 Aligned_cols=54 Identities=20% Similarity=0.200 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHHh
Q 036950 306 YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVLE 367 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al~ 367 (469)
-+.|...|+.|..+....+.. .+++..+.+|.+.-|+. +++.++|+..+.+|..
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pt--------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPT--------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTT--------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCC--------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 357889999999987222322 46778888999888887 7899999998887763
No 333
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=41.09 E-value=32 Score=28.75 Aligned_cols=35 Identities=11% Similarity=-0.044 Sum_probs=29.8
Q ss_pred HhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC
Q 036950 289 AAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYD 323 (469)
Q Consensus 289 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~ 323 (469)
....+...|-.+++.++|.+|+++..++|+.-|..
T Consensus 70 ~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 70 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 34556788899999999999999999999987754
No 334
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=38.99 E-value=47 Score=29.95 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHHh
Q 036950 306 YERASKRYEQAVNYIGY-DSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVLE 367 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~-~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al~ 367 (469)
-+.|...|+.|..+... .+. ..+++..+.+|.+.-|+. +++.++|+..+.+|..
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~p--------thPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPP--------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT--------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCC--------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35788899999987642 222 246778888999888887 7899999998888763
No 335
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=38.73 E-value=78 Score=33.25 Aligned_cols=31 Identities=13% Similarity=0.024 Sum_probs=25.5
Q ss_pred HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 339 ITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 339 ~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
...+.++|..+++.++++.|+.++.++=..+
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d~~ 711 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHDLE 711 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccChh
Confidence 3578899999999999999999999865443
No 336
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=37.72 E-value=1.2e+02 Score=22.18 Aligned_cols=26 Identities=27% Similarity=0.213 Sum_probs=23.1
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
..++|.=|.-+|+|+.|+.+++-+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 46778889999999999999999994
No 337
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=35.91 E-value=7.7 Score=38.81 Aligned_cols=39 Identities=28% Similarity=0.326 Sum_probs=0.0
Q ss_pred HHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcC
Q 036950 284 QEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIGY 322 (469)
Q Consensus 284 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~ 322 (469)
.+.++.|..+-.+|.++=+.|+|++|+.+|..|+.++..
T Consensus 5 ~~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 5 NTNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 345678888889999999999999999999999998864
No 338
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=34.94 E-value=58 Score=29.82 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHHh
Q 036950 307 ERASKRYEQAVNYIGY-DSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVLE 367 (469)
Q Consensus 307 ~~A~~~Y~~al~~~~~-~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al~ 367 (469)
+.|...|+.|..+... .+. ..+++..+.+|.+.-|+. +++.++|+..+.+|..
T Consensus 152 e~a~~aY~~A~~iA~~~L~p--------thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAP--------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCT--------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC--------CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4788899999987642 222 246778889999888887 6899999999988774
No 339
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=34.15 E-value=62 Score=29.39 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHH
Q 036950 306 YERASKRYEQAVNYIGY-DSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVL 366 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~-~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al 366 (469)
-+.|...|+.|..+... .+. ..+++..+.+|.+.-|+. +++.++|+..+.+|.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~p--------thPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQP--------THPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT--------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC--------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 36788899999886542 222 256778888999888776 689999999888766
No 340
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=32.87 E-value=67 Score=29.39 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHH
Q 036950 306 YERASKRYEQAVNYIGY-DSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVL 366 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~-~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al 366 (469)
-+.|...|+.|..+... .+. ..+++..+.+|.+.-|+. +++.++|+..+.+|.
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~p--------ThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPP--------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT--------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC--------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35788999999886532 222 256778888999888777 689999999888765
No 341
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=31.49 E-value=85 Score=23.43 Aligned_cols=39 Identities=10% Similarity=0.085 Sum_probs=34.0
Q ss_pred hHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 283 TQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 283 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
.++-++.|..+.+.|.-++++|++..|+.++.=|-.++.
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 66 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWLE 66 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999887776653
No 342
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=31.14 E-value=62 Score=32.12 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=23.5
Q ss_pred HhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 340 TCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 340 ~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
.++.=+|.+|+-+++|++|+..|+++|.
T Consensus 191 aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 191 AARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 3445568888889999999999999995
No 343
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=30.92 E-value=37 Score=24.90 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=28.1
Q ss_pred CCChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 280 DMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 280 ~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
.|+..+..+.+ ..|.++-..|+|+.|+..|+.++..+.
T Consensus 6 ~~~~~~i~e~~----k~ARe~Al~GnYdta~~yY~g~~~qI~ 43 (78)
T 2rpa_A 6 TMSLQMIVENV----KLAREYALLGNYDSAMVYYQGVLDQMN 43 (78)
T ss_dssp SSSSHHHHHHH----HHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHH----HHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 34555544433 456778888999999999999998664
No 344
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.76 E-value=3.9e+02 Score=26.13 Aligned_cols=72 Identities=14% Similarity=0.115 Sum_probs=50.0
Q ss_pred hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 290 AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 290 a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
++-+..+..-++..++|.+|...++++......... ...+....+.=.+..|...++|.+|..++..+.+-.
T Consensus 177 ve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~--------~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 177 IQFILEQMELSILKGDYSQATVLSRKILKKTFKNPK--------YESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSC--------CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCC--------cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence 344455667788888898888888887542221111 134556666667888888999999999999998653
No 345
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=30.65 E-value=70 Score=28.81 Aligned_cols=53 Identities=13% Similarity=0.197 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHH
Q 036950 306 YERASKRYEQAVNYIGY-DSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVL 366 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~-~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al 366 (469)
-+.|...|+.|..+... .+. ..+++..+.+|-+.-|+. +++.++|+..+.+|.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~p--------thPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPP--------TNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT--------TCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC--------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788899999886642 222 246778888999888774 589999999888776
No 346
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=30.55 E-value=91 Score=23.30 Aligned_cols=38 Identities=11% Similarity=0.081 Sum_probs=32.9
Q ss_pred HHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Q 036950 284 QEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYIG 321 (469)
Q Consensus 284 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~ 321 (469)
++-++.|..+.+.|.-++++|++..|+.++.=|-.++.
T Consensus 33 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 70 (87)
T 2pmr_A 33 EAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLLD 70 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999887766553
No 347
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=29.68 E-value=1.4e+02 Score=23.92 Aligned_cols=33 Identities=12% Similarity=-0.039 Sum_probs=27.9
Q ss_pred hhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCC
Q 036950 291 GKKKEEGNVLFKAGKYERASKRYEQAVNYIGYD 323 (469)
Q Consensus 291 ~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~ 323 (469)
..+.-.|-.+||.|+|.+|+++....|+.-|.+
T Consensus 75 d~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 75 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 107 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence 345568889999999999999999999987754
No 348
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=29.65 E-value=1.5e+02 Score=24.86 Aligned_cols=67 Identities=13% Similarity=0.195 Sum_probs=45.2
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhH-hHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCN-LNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~-~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
...|-.+|..|+|-+|-+..+.+=.-.+. .+ ++..-.+.+ +. +=.|..+++.||+..|...+.+++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~---~~-~er~~lqGL---IQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGR---GN-TESKFLHGM---VQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCS---SS-HHHHHHHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCC---Cc-hHHHHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 56889999999999998888776653321 11 233333333 22 2235566667999999999999884
No 349
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=29.29 E-value=3.9e+02 Score=25.62 Aligned_cols=94 Identities=11% Similarity=0.121 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHH-----HHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhC
Q 036950 306 YERASKRYEQAVNYIGYDSSFSDEEKQQAK-----VLKITCNLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEID 380 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~-----~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~ 380 (469)
-.++...|+.|...+.....++ ..|...- -..+.+++-.|......++|-+||..++.|.+ .++.+.+.-
T Consensus 238 a~~~~~~Y~~A~~~l~~~~~~~-~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~----~l~~a~~~~ 312 (380)
T 3c3r_A 238 ANQAADYFGDAFKQCQYKDTLP-KEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAE----LIKTVASRY 312 (380)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHccccccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH----HHHHHHHHh
Confidence 3456688999999887332233 3343322 22334455556666677789999999998874 455555443
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 036950 381 PDNSLEAGWGVRMEYKLLKEKVREYNKKD 409 (469)
Q Consensus 381 p~~~~~~~~~~~~~l~~~~~~~~~~~~~e 409 (469)
.... .++.....++..+++..+..
T Consensus 313 ~~~~-----~l~~l~~~i~~~l~~a~kdN 336 (380)
T 3c3r_A 313 DEYV-----NVKDFSDKINRALAAAKKDN 336 (380)
T ss_dssp TTTC-----CCHHHHHHHHHHHHHHHHHH
T ss_pred cchH-----hHHHHHHHHHHHHHHHHHhh
Confidence 3333 44455555555555444443
No 350
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=28.90 E-value=72 Score=31.73 Aligned_cols=28 Identities=14% Similarity=0.130 Sum_probs=23.3
Q ss_pred HhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 340 TCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 340 ~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
.++.=+|.+|+-+++|++|+..|+++|.
T Consensus 197 aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 197 AAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3444568888889999999999999996
No 351
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=28.83 E-value=3.6e+02 Score=25.15 Aligned_cols=64 Identities=23% Similarity=0.104 Sum_probs=35.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 296 EGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 296 ~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
+=...+..|+|=+|...|+-....+-.-.. -...+.++.+=|..+++.|++..|.+.|.-.++.
T Consensus 19 rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~---------~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev 82 (312)
T 2wpv_A 19 RFENKIKAGDYYEAHQTLRTIANRYVRSKS---------YEHAIELISQGALSFLKAKQGGSGTDLIFYLLEV 82 (312)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhccChHHHHHHHHHHHHHHHHhcC---------HHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHH
Confidence 334455556666666666555443211100 0112334556677777778888887777666654
No 352
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=28.78 E-value=3.5e+02 Score=25.87 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH-----HHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 306 YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLK-----ITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~-----~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
-.++...|++|...+......-...|...-..+ +..|+-.|..+...++|.++|..++.|.+.-
T Consensus 215 a~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l 283 (376)
T 3r9m_A 215 AYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLY 283 (376)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 345667899999888653211123343333333 3444445555556678999999998887543
No 353
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=27.89 E-value=1.9e+02 Score=28.47 Aligned_cols=75 Identities=17% Similarity=0.132 Sum_probs=48.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCC--C---HH---HHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHH
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSF--S---DE---EKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKV 365 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~--~---~e---~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~a 365 (469)
....+.+.+.++|-+|.-++.....++.++... + .. ...--.+.+..+|...+..+-+-+.|+.|+..|+..
T Consensus 39 ~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L 118 (436)
T 2yin_A 39 YKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKEL 118 (436)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 356888999999999999997776777664321 0 00 001112333455555566666777899999999998
Q ss_pred Hhh
Q 036950 366 LEL 368 (469)
Q Consensus 366 l~~ 368 (469)
+..
T Consensus 119 ~~~ 121 (436)
T 2yin_A 119 AEQ 121 (436)
T ss_dssp HHH
T ss_pred HHH
Confidence 853
No 354
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=27.81 E-value=70 Score=29.39 Aligned_cols=57 Identities=23% Similarity=0.206 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHHh
Q 036950 306 YERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVLE 367 (469)
Q Consensus 306 ~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al~ 367 (469)
-+.|...|+.|..+....- +..-..+++..+.+|.+.-|+. +++.++|+..+.+|..
T Consensus 168 ~e~a~~aYq~A~eiA~~~L-----~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFL-----EKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHC-----TTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4578889999987653111 0012356788889999988884 7899999999988764
No 355
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=27.49 E-value=71 Score=31.90 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=23.9
Q ss_pred HhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 340 TCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 340 ~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.++.=+|.+||-+++|++|+..|+++|..
T Consensus 203 aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 203 AAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 34455688888899999999999999963
No 356
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=26.61 E-value=83 Score=31.70 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=26.9
Q ss_pred HHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHh
Q 036950 333 QAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLE 367 (469)
Q Consensus 333 ~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~ 367 (469)
....|++.+|+|. .+|...++|++|+..|+++|.
T Consensus 189 aA~allarvyL~~-~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 189 VASALLARMYLNA-EIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHHTH-HHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-hhccChhHHHHHHHHHHHHHh
Confidence 4566777888874 456667899999999999996
No 357
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=26.19 E-value=48 Score=29.66 Aligned_cols=59 Identities=15% Similarity=0.029 Sum_probs=44.0
Q ss_pred hcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHH-hhCHHHHHHHHHHHHh
Q 036950 302 KAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLK-LKEYKQAEKLCSKVLE 367 (469)
Q Consensus 302 k~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~k-l~~~~~ai~~~~~al~ 367 (469)
..|+-+.|...|+.|..+.... ..-..+++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~-------L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEH-------PDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHC-------GGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhh-------CCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4566789999999999876422 111245567788999888775 6889999999999864
No 358
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.11 E-value=2.4e+02 Score=22.21 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=26.9
Q ss_pred HhHHHHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHHhhCCC
Q 036950 342 NLNNAACKLKLKEYKQAEKLCSKVLELDKLDIKKALEIDPD 382 (469)
Q Consensus 342 ~~N~a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al~l~p~ 382 (469)
|.|.|+..=..|+-+.|+..|.+.| ..|.+++.+..+
T Consensus 25 ~Is~AL~~DE~g~k~~Al~lYk~GI----~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 25 FVNKGLNTDELGQKEEAKNYYKQGI----GHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH----HHHHHHHSSCCC
T ss_pred HHHHHhhhhhcCCHHHHHHHHHHHH----HHHHHhcccccc
Confidence 3445555555588888888888887 688889888764
No 359
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=25.99 E-value=1.6e+02 Score=24.62 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 304 GKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 304 ~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
++.++|...|+.|++..... +.+|.--|.=-++.|+...|..-..+||.+.
T Consensus 74 ~D~d~aR~vy~~a~~~hKkF---------------AKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 74 QEPDDARDYFQMARANCKKF---------------AFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp HCGGGCHHHHHHHHHHCTTB---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhHHH---------------HHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 68888888999888852211 6677777777788888888888777777544
No 360
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=25.38 E-value=47 Score=26.91 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=28.2
Q ss_pred HHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036950 288 EAAGKKKEEGNVLFKAGKYERASKRYEQAVNY 319 (469)
Q Consensus 288 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~ 319 (469)
+.|..+.++|.+++.+|+.-+|-++|=+|...
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 46788899999999999999999999888863
No 361
>1t98_A KICB protein, chromosome partition protein MUKF; winged helix, helix-turn helix, domain swapped, condensin; 2.90A {Escherichia coli} SCOP: a.4.5.65 a.47.6.1
Probab=24.94 E-value=3.4e+02 Score=24.34 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHHhhc
Q 036950 329 EEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVLELD 369 (469)
Q Consensus 329 e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al~~d 369 (469)
++.+.+++-.+.++ ..+|..||..|+..|.--
T Consensus 180 eQQ~~Vk~~IA~LL---------~qDW~~AI~~CE~LL~eT 211 (287)
T 1t98_A 180 EQQQQVKDDIAQLL---------NKDWRAAISSCELLLSET 211 (287)
T ss_dssp HHHHHHHHHHHHHH---------HHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHh
Confidence 55556665544443 379999999999998644
No 362
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=23.92 E-value=2.2e+02 Score=28.33 Aligned_cols=109 Identities=15% Similarity=0.085 Sum_probs=0.0
Q ss_pred CChHHHHHH----hhhcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhh-CH
Q 036950 281 MNTQEKIEA----AGKKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLK-EY 355 (469)
Q Consensus 281 l~~~e~~~~----a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~-~~ 355 (469)
|+++|+... |....+..-..|-.++++.|...|++|+..+++ ..++.+-+.-..+.+ ..
T Consensus 1 ~~~e~~~~~~i~~aR~vyer~l~~~P~~~~e~~~~iferal~~~ps----------------~~LW~~Y~~f~~~~~~~~ 64 (493)
T 2uy1_A 1 MDAEEKMGVELSSPSAIMEHARRLYMSKDYRSLESLFGRCLKKSYN----------------LDLWMLYIEYVRKVSQKK 64 (493)
T ss_dssp -----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCCC----------------HHHHHHHHHHHHHHC---
T ss_pred CChHHHcCcchHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhccCCC----------------HHHHHHHHHHHHHhCchH
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHhhCCCCCCcchHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhh
Q 036950 356 KQAEKLCSKVLELDKLDIKKALEIDPDNSLEAGWGVRMEYKLLKEK---VREYNKKDVQFYGNIFA 418 (469)
Q Consensus 356 ~~ai~~~~~al~~d~~~~~~al~l~p~~~~~~~~~~~~~l~~~~~~---~~~~~~~e~~~~~~mf~ 418 (469)
+.....++.|+ ..+..+|.+. .+.....+.... ......+-++.|.+.+.
T Consensus 65 ~~i~~~fe~al--------~~vg~d~~s~-----~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~ 117 (493)
T 2uy1_A 65 FKLYEVYEFTL--------GQFENYWDSY-----GLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQ 117 (493)
T ss_dssp -CTHHHHHHHH--------HHSTTCTTCH-----HHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--------HHcCCCcccH-----HHHHHHHHHHHhchhhhHHHHHHHHHHHHHHh
No 363
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=23.56 E-value=2.2e+02 Score=30.98 Aligned_cols=60 Identities=23% Similarity=0.365 Sum_probs=47.2
Q ss_pred CCCCCCCEEEEEEEEEec-CCc-------------------------------EEeccccEEEEECCCccchhHHHHHhc
Q 036950 65 ENPKDLDEVFVKYEVRLE-DGT-------------------------------LISKSDGVEFTVGDGYFCAALAKAVKT 112 (469)
Q Consensus 65 ~~~~~gd~V~i~y~~~~~-~G~-------------------------------~~~~t~~~~~~ig~~~~~~gle~aL~g 112 (469)
..+..|+.|.|.|+..+. +|. .+++...+.|-+|.|.+.+-++..+.-
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~q 638 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQ 638 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTT
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeee
Confidence 467899999999999763 321 222225678999999999999999999
Q ss_pred ccCCcEEEEEEc
Q 036950 113 MKKGEKVLLTVK 124 (469)
Q Consensus 113 mk~Ge~~~~~ip 124 (469)
|.+|+...|...
T Consensus 639 ms~gqT~~F~~~ 650 (950)
T 3htx_A 639 MTVGEYASFKMT 650 (950)
T ss_dssp CCTTCEEEEEES
T ss_pred ccccceeEEecc
Confidence 999999988843
No 364
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=22.49 E-value=5.5e+02 Score=25.04 Aligned_cols=66 Identities=20% Similarity=0.124 Sum_probs=49.5
Q ss_pred hcHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHHH
Q 036950 292 KKKEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFSDEEKQQAKVLKITCNLNNAACKLKLKEYKQAEKLCSKVL 366 (469)
Q Consensus 292 ~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~~e~~~~~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~al 366 (469)
-....++-++..|+|.+|....+....-.... .+ ...++.+++-....|+..++|..|....+++.
T Consensus 139 l~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~--~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 139 VTKDLVEIKKEEGKIDEAADILCELQVETYGS--ME-------MSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--SC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--cc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 33567888999999999999998887544321 12 23445666777888899999999999888864
No 365
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=21.91 E-value=1.1e+02 Score=25.42 Aligned_cols=66 Identities=23% Similarity=0.092 Sum_probs=36.9
Q ss_pred EEEecCCccCCCCCCCEEEEEEEEEecCCcEEecc--ccEEEEECCC----ccchhHHHHHhcccCCcEEEEEEcC
Q 036950 56 KILVEGKKWENPKDLDEVFVKYEVRLEDGTLISKS--DGVEFTVGDG----YFCAALAKAVKTMKKGEKVLLTVKP 125 (469)
Q Consensus 56 ~i~~~G~g~~~~~~gd~V~i~y~~~~~~G~~~~~t--~~~~~~ig~~----~~~~gle~aL~gmk~Ge~~~~~ip~ 125 (469)
+++.... .+.+.-|..|++.. ..+|....-+ .|....+..+ .+..-+-.||.|.++||.+.+..|.
T Consensus 73 ~vi~~~~-~~~V~~Gs~V~l~~---~~~~~~~~~~iVg~~ead~~~~~~~IS~~SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 73 VILEEGS-GEVIGLGSVVELED---PLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp EECCTTC-SCCCCTTCEEEEEC---TTTCCEEEEEEECGGGCBTTSSSEEEETTSHHHHHHTTCCTTCEEEEEETT
T ss_pred cccCCCC-CCEEEeCcEEEEEE---cCCCCEEEEEEEChhHcCcCCCCEEECCCCHHHHHHcCCCCCCEEEEEcCC
Confidence 4455444 25788888887743 1233221100 0100011112 1334688999999999999999874
No 366
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=21.78 E-value=2.4e+02 Score=22.83 Aligned_cols=49 Identities=10% Similarity=-0.010 Sum_probs=34.4
Q ss_pred HHHHHHhhCHHHHHHHHHHHHhhcHHHHHHHH-hhCCCCCCcchHHHHHHHHHHH
Q 036950 346 AACKLKLKEYKQAEKLCSKVLELDKLDIKKAL-EIDPDNSLEAGWGVRMEYKLLK 399 (469)
Q Consensus 346 a~~~~kl~~~~~ai~~~~~al~~d~~~~~~al-~l~p~~~~~~~~~~~~~l~~~~ 399 (469)
|.-.+..|.|+.|.-.|.+|++.-++.+-..+ ...|... .+...+..+.
T Consensus 23 A~~~~~~g~y~~a~F~aqQA~Ek~lKa~L~~~~g~~p~~H-----~l~~L~~~~~ 72 (141)
T 3o10_A 23 ARNDLHKNANEWVCFKCYLSTKLALIAADYAVRGKSDKDV-----KPTALAQKIE 72 (141)
T ss_dssp HGGGTTTTCHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTS-----CHHHHHHHHH
T ss_pred HhhHHhhCccceEeeehhHHHHHHHHHHHHHhcCCCcccC-----CcHHHHHHHH
Confidence 44445578999999999999987655554444 4457776 7777777663
No 367
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=21.15 E-value=1.7e+02 Score=32.16 Aligned_cols=74 Identities=12% Similarity=-0.005 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCC--HHHHHH------HHHHHHHhHhHHHHHHHHhhCHHHHHHHHHHH
Q 036950 294 KEEGNVLFKAGKYERASKRYEQAVNYIGYDSSFS--DEEKQQ------AKVLKITCNLNNAACKLKLKEYKQAEKLCSKV 365 (469)
Q Consensus 294 k~~Gn~~fk~~~~~~A~~~Y~~al~~~~~~~~~~--~e~~~~------~~~l~~~~~~N~a~~~~kl~~~~~ai~~~~~a 365 (469)
.-+|..++..|++++|..+|++|-.-+....... ++.... ...+....|+..+..+-+.+-|+.+++.+..|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3589999999999999999999876553222111 111111 12234457888888888999999999999998
Q ss_pred Hh
Q 036950 366 LE 367 (469)
Q Consensus 366 l~ 367 (469)
|+
T Consensus 924 I~ 925 (950)
T 4gq2_M 924 DA 925 (950)
T ss_dssp HH
T ss_pred Hh
Confidence 85
No 368
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=21.06 E-value=2.1e+02 Score=28.54 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=23.8
Q ss_pred HhHhHHHHHHHHhhCHHHHHHHHHHHHhh
Q 036950 340 TCNLNNAACKLKLKEYKQAEKLCSKVLEL 368 (469)
Q Consensus 340 ~~~~N~a~~~~kl~~~~~ai~~~~~al~~ 368 (469)
.++.=+|.+||-+++|++|+..|+++|..
T Consensus 204 aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 204 VVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34445688888899999999999999964
No 369
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=20.96 E-value=95 Score=27.82 Aligned_cols=21 Identities=14% Similarity=0.382 Sum_probs=18.7
Q ss_pred CCccchhHHHHHhccccCcEE
Q 036950 215 EEQVIDGLDRAVKTMKKGEVA 235 (469)
Q Consensus 215 ~~~v~~gle~~L~~m~~Ge~~ 235 (469)
.+.+++.|+.++..|++|+.+
T Consensus 170 ~~~l~~~f~~a~~~l~~G~is 190 (252)
T 3rfw_A 170 QSTMVKPFTDAAFALKNGTIT 190 (252)
T ss_dssp SSSSCHHHHHHHHHSCTTEEC
T ss_pred cccccHHHHHHHHcCCCCCcc
Confidence 458899999999999999976
No 370
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.61 E-value=1.5e+02 Score=24.28 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=35.2
Q ss_pred CChHHHHHHhhhcHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 036950 281 MNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYEQAVNYI 320 (469)
Q Consensus 281 l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~~al~~~ 320 (469)
.+...=+..|..+...+..+...|++..|.-.|-+.+.++
T Consensus 31 i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 31 IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3556667899999999999999999999999999988766
No 371
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=20.01 E-value=33 Score=27.09 Aligned_cols=30 Identities=13% Similarity=0.490 Sum_probs=23.6
Q ss_pred CCccchhHHHHHhccccCcEEEEEEcCCCcc
Q 036950 215 EEQVIDGLDRAVKTMKKGEVALVTIEPEYAF 245 (469)
Q Consensus 215 ~~~v~~gle~~L~~m~~Ge~~~~~i~~~~~y 245 (469)
.+.+++.|+.++..|++|+.+.. |...+||
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~p-v~t~~G~ 108 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISPI-VQTDSGL 108 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCCC-EECSSSE
T ss_pred CCCCCchHHHHHhcCCCCCCCCc-EEeCCeE
Confidence 45889999999999999998763 4455555
Done!