Query 036952
Match_columns 311
No_of_seqs 313 out of 2153
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:38:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ci0_A Protein (PNP oxidase); 100.0 6.5E-56 2.2E-60 404.3 19.1 198 108-311 10-228 (228)
2 2a2j_A Pyridoxamine 5'-phospha 100.0 3.9E-53 1.3E-57 389.3 18.0 188 111-311 34-244 (246)
3 1nrg_A Pyridoxine 5'-phosphate 100.0 4.1E-52 1.4E-56 385.7 19.8 200 107-311 29-261 (261)
4 1dnl_A Pyridoxine 5'-phosphate 100.0 2.9E-49 9.8E-54 353.3 19.0 180 123-311 2-199 (199)
5 1ty9_A Phenazine biosynthesis 100.0 4.7E-49 1.6E-53 357.8 17.9 193 108-311 12-222 (222)
6 2i51_A Uncharacterized conserv 100.0 5.5E-40 1.9E-44 292.3 10.7 162 133-311 3-195 (195)
7 2ou5_A Pyridoxamine 5'-phospha 100.0 1.1E-32 3.7E-37 241.4 11.0 130 148-311 24-175 (175)
8 1jzt_A Hypothetical 27.5 kDa p 99.9 2.4E-26 8.3E-31 211.4 9.8 95 1-104 148-246 (246)
9 2o8n_A APOA-I binding protein; 99.9 1.9E-25 6.5E-30 207.5 9.7 95 1-106 166-260 (265)
10 2iab_A Hypothetical protein; N 99.7 8.8E-18 3E-22 143.1 9.4 116 150-306 22-153 (155)
11 2qea_A Putative general stress 99.7 1.8E-16 6.1E-21 135.6 9.6 98 150-287 14-134 (160)
12 3dmb_A Putative general stress 99.6 3.1E-16 1.1E-20 132.5 8.2 98 152-285 19-136 (147)
13 2re7_A Uncharacterized protein 99.6 1.5E-15 5.2E-20 124.7 8.3 96 151-283 17-134 (134)
14 3rss_A Putative uncharacterize 99.6 7.6E-16 2.6E-20 154.4 5.2 76 1-86 136-216 (502)
15 2ig6_A NIMC/NIMA family protei 99.5 3.2E-14 1.1E-18 120.6 8.9 97 151-284 29-143 (150)
16 2hhz_A Pyridoxamine 5'-phospha 99.5 1.2E-13 4.2E-18 116.0 10.5 100 151-285 13-132 (150)
17 2i02_A General stress protein 99.5 1.1E-13 3.7E-18 115.6 9.6 98 150-284 20-139 (148)
18 3k5w_A Carbohydrate kinase; 11 99.4 1.9E-14 6.5E-19 143.3 2.8 73 1-86 131-208 (475)
19 3d3j_A Enhancer of mRNA-decapp 99.4 1.1E-13 3.8E-18 130.8 7.1 87 2-106 217-305 (306)
20 2hq7_A Protein, related to gen 99.4 1.8E-13 6.2E-18 113.5 7.4 99 151-285 17-135 (146)
21 3u35_A General stress protein; 99.4 1.7E-13 5.7E-18 120.4 6.7 117 133-294 27-163 (182)
22 3d3k_A Enhancer of mRNA-decapp 99.4 3.8E-13 1.3E-17 124.3 7.3 86 2-105 170-257 (259)
23 2fhq_A Putative general stress 99.3 6.9E-12 2.3E-16 103.3 8.6 96 151-282 19-132 (141)
24 1vl7_A Hypothetical protein AL 99.3 4.3E-12 1.5E-16 107.6 7.2 59 150-212 28-111 (157)
25 3ec6_A General stress protein 99.2 1.7E-11 5.8E-16 101.5 8.0 96 151-284 14-130 (139)
26 3db0_A LIN2891 protein; putati 99.2 5.2E-11 1.8E-15 96.8 10.5 94 150-281 15-127 (128)
27 2asf_A Hypothetical protein RV 99.1 3.2E-10 1.1E-14 93.5 11.1 100 149-284 18-134 (137)
28 3f7e_A Pyridoxamine 5'-phospha 99.1 3.3E-10 1.1E-14 92.6 7.8 97 151-281 14-130 (131)
29 1rfe_A Hypothetical protein RV 98.9 6.7E-09 2.3E-13 87.3 10.8 106 152-284 22-148 (162)
30 2aq6_A Pyridoxine 5'-phosphate 98.8 4.3E-09 1.5E-13 86.9 7.0 58 151-212 16-92 (147)
31 2htd_A Predicted flavin-nucleo 98.8 7.5E-09 2.6E-13 86.3 7.0 57 153-213 39-114 (140)
32 3tgv_A Heme-binding protein HU 98.7 2.3E-08 7.8E-13 84.3 6.1 57 151-211 13-93 (148)
33 2arz_A Hypothetical protein PA 98.6 3.2E-07 1.1E-11 82.9 10.8 100 151-284 18-142 (247)
34 3swj_A CHUZ, putative uncharac 98.4 3.8E-07 1.3E-11 83.6 8.1 100 151-283 97-224 (251)
35 3ba3_A Protein LP_0091, pyrido 98.4 4.3E-07 1.5E-11 76.8 6.4 96 151-283 13-135 (145)
36 2q9k_A Uncharacterized protein 98.3 4.6E-07 1.6E-11 76.8 4.5 57 151-211 20-94 (151)
37 2fg9_A 5-nitroimidazole antibi 98.3 4E-06 1.4E-10 72.3 10.3 57 152-212 38-126 (178)
38 2hti_A BH0577 protein; structu 98.1 2.4E-05 8.1E-10 67.6 11.4 56 152-212 25-110 (185)
39 3cp3_A Uncharacterized protein 98.1 1.5E-05 5.3E-10 66.3 9.8 90 151-282 26-139 (148)
40 1xhn_A CREG, cellular represso 98.1 1.5E-05 5.2E-10 69.0 10.0 97 152-282 30-166 (184)
41 3dnh_A Uncharacterized protein 98.0 1.3E-05 4.5E-10 73.4 8.9 98 151-282 38-159 (258)
42 2fur_A Hypothetical protein; s 98.0 1.5E-05 5.2E-10 70.5 8.4 56 152-212 32-117 (209)
43 2hq9_A MLL6688 protein; struct 98.0 2.2E-05 7.4E-10 65.2 8.6 56 151-212 18-93 (149)
44 3u5w_A Putative uncharacterize 98.0 2.1E-05 7.2E-10 65.9 8.5 55 152-212 22-96 (148)
45 3gas_A Heme oxygenase; FMN-bin 97.9 2.1E-05 7.1E-10 72.4 7.9 99 151-283 97-224 (259)
46 2vpa_A NIMA-related protein; c 97.8 0.00011 3.8E-09 65.5 10.7 56 152-212 55-146 (216)
47 3fkh_A Putative pyridoxamine 5 97.7 0.00017 5.9E-09 60.1 8.9 57 150-212 19-94 (138)
48 3in6_A FMN-binding protein; st 96.9 0.00073 2.5E-08 57.2 4.1 53 154-209 32-105 (148)
49 3a6r_A FMN-binding protein; el 96.0 0.0067 2.3E-07 49.6 4.7 56 152-212 13-95 (122)
50 2ol5_A PAI 2 protein; structur 92.4 1.4 4.9E-05 38.2 11.6 53 153-211 23-111 (202)
51 3r5l_A Deazaflavin-dependent n 90.4 0.38 1.3E-05 39.0 5.3 60 152-219 15-95 (122)
52 3r5y_A Putative uncharacterize 72.5 3.7 0.00013 34.2 4.3 61 152-220 39-120 (147)
53 3r5z_A Putative uncharacterize 69.7 5.5 0.00019 33.1 4.7 60 153-220 38-118 (145)
54 3h96_A F420-H2 dependent reduc 50.0 15 0.00051 30.3 3.9 61 152-220 30-114 (143)
55 3lyd_A Uncharacterized protein 47.1 11 0.00038 31.8 2.8 18 26-43 16-33 (161)
No 1
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=100.00 E-value=6.5e-56 Score=404.29 Aligned_cols=198 Identities=38% Similarity=0.650 Sum_probs=175.0
Q ss_pred CCCchhhhhhccCCCCcCcccCCCChHHHHHHHHHHHH-HcCCCCCCceEEEeeC-CCCce---------------EEEe
Q 036952 108 PSVDISALRENYISPEFLEEQVESDPINQFRKWFDDAI-AAGLREPNAMALSTVG-KDGKP---------------FWYS 170 (311)
Q Consensus 108 ~~~~~~~~r~~y~~~~~~~~~~~~dP~~~f~~Wl~~A~-~~~~~~p~a~~LATv~-~dG~P---------------~F~T 170 (311)
..+|+++||++|...+|++++++.||+.||..||++|+ ++++.+|++|+||||| +||+| +|||
T Consensus 10 ~~~~~~~~r~~y~~~~l~~~~~~~~P~~~f~~wl~~A~~~~~~~~~~~~~LATvd~~dG~P~~R~V~lk~~d~~g~~F~T 89 (228)
T 1ci0_A 10 KPIIFAPETYQYDKFTLNEKQLTDDPIDLFTKWFNEAKEDPRETLPEAITFSSAELPSGRVSSRILLFKELDHRGFTIYS 89 (228)
T ss_dssp --------------CCCCGGGCCSSHHHHHHHHHHHHHHCSSCSCTTEEEEEEEETTTTEEEEEEEECCEECSSSEEEEE
T ss_pred CCCChHHHhhhcccCCCChhhcCCChHHHHHHHHHHHHhhcCCCCCCEEEEEEeeCCCCCeEEEEEEEEEECCCEEEEEe
Confidence 45689999999999999999999999999999999999 7888999999999999 99999 9999
Q ss_pred CCC-CccccccccccccCCceeE-eee--cCeeEEEEEEEEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHH
Q 036952 171 TST-GQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQ 246 (311)
Q Consensus 171 ~~~-S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~ 246 (311)
|++ |+ |+ +||++||+|+| ||| +.|||||+|+|++++++++++||++||++|||+||+|+||++|.+|+.|++
T Consensus 90 n~~~S~-K~---~eL~~NP~val~f~~~~~~rqVrI~G~ae~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~ 165 (228)
T 1ci0_A 90 NWGTSR-KA---HDIATNPNAAIVFFWKDLQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDE 165 (228)
T ss_dssp ECSSSH-HH---HHHHHCCEEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHH
T ss_pred CCCCCc-ch---HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHH
Confidence 999 99 99 99999999999 999 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCCCCcceEEEeecCcCCCCCcEEEEecC
Q 036952 247 QYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTSRLHDRLQYSPQEINGKRVWKINRLCP 311 (311)
Q Consensus 247 ~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~r~H~R~~y~r~~~~~~~~W~~~rL~P 311 (311)
+.+++.++|+++.++|+|++||||+|.|++|||||++++|+|||++|++.. .+++|.++||+|
T Consensus 166 ~~~~~~~~f~~~~~~p~p~~w~g~rv~P~~iEfWq~~~~rlHdR~~y~r~~--~~~~W~~~rL~P 228 (228)
T 1ci0_A 166 LTQKNTERFKDAEDIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKT--ENDPWKVVRLAP 228 (228)
T ss_dssp HHHHHHHHTTSCSSCCCCTTEEEEEEEEEEEEEEECCTTSCCEEEEEECSS--TTSCCEEEEECC
T ss_pred HHHHHHHhhcCCCCCCCCCcEEEEEEEccEEEEeeCCCCCcEEEEEEEecC--CCCCeEEEEecC
Confidence 999999999765449999999999999999999999999999999999851 024799999998
No 2
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=100.00 E-value=3.9e-53 Score=389.33 Aligned_cols=188 Identities=38% Similarity=0.696 Sum_probs=171.5
Q ss_pred chhhhhhccCC-----CCcCcccCCCChHHHHHHHHHHHHHcCCCCCCceEEEeeCCCCce---------------EEEe
Q 036952 111 DISALRENYIS-----PEFLEEQVESDPINQFRKWFDDAIAAGLREPNAMALSTVGKDGKP---------------FWYS 170 (311)
Q Consensus 111 ~~~~~r~~y~~-----~~~~~~~~~~dP~~~f~~Wl~~A~~~~~~~p~a~~LATv~~dG~P---------------~F~T 170 (311)
|+++||++|.. ..|++++++.||+.||..||++|++++..+|++|+||||| +|+| +|||
T Consensus 34 ~~~~~r~~y~~~~~~~~~l~~~~~~~~P~~~f~~Wl~~A~~~~~~e~~~~~LATvd-dG~P~~R~Vllk~~d~~gl~F~T 112 (246)
T 2a2j_A 34 QLARMRGEYGPEKDGCGDLDFDWLDDGWLTLLRRWLNDAQRAGVSEPNAMVLATVA-DGKPVTRSVLCKILDESGVAFFT 112 (246)
T ss_dssp ----------CTTTSCCCCCGGGGTTHHHHHHHHHHHHHHHTTCSSTTEEEEEEEE-TTEEEEEEEEEEEEETTEEEEEE
T ss_pred cHHHHHHhhhccccccCCcChhhcCCCHHHHHHHHHHHHHhccCCCCceEEEEEcC-CCceEEEEEEEEEEcCCEEEEEE
Confidence 79999999998 8899999999999999999999999999999999999999 9999 9999
Q ss_pred CCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHH
Q 036952 171 TSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQ 247 (311)
Q Consensus 171 ~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~ 247 (311)
|++|+ |+ +||++||+|+| ||| +.|||||+|+|++++++++++||++||++|||+||+|+||++|.+|+.|+++
T Consensus 113 n~~S~-K~---~eL~~NP~vaL~f~~~~~~rqVrI~G~ae~v~~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~ 188 (246)
T 2a2j_A 113 SYTSA-KG---EQLAVTPYASATFPWYQLGRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQ 188 (246)
T ss_dssp ETTSH-HH---HHHHHSCEEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHH
T ss_pred cCCCh-hh---HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEeccHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHH
Confidence 99999 99 99999999999 999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCCCCcceEEEeecCcCCCCCcEEEEecC
Q 036952 248 YKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTSRLHDRLQYSPQEINGKRVWKINRLCP 311 (311)
Q Consensus 248 ~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~r~H~R~~y~r~~~~~~~~W~~~rL~P 311 (311)
.+++.++|+++.++|+|++||||+|+|++|||||++++|+|||++|++ + +++||+|
T Consensus 189 ~~~~~~~f~~~~~vp~pp~w~g~rv~P~~iEfWqg~~~rlHdR~~y~r------~--~~~rL~P 244 (246)
T 2a2j_A 189 LAEVTRRFADQDQIPVPPGWGGYRIAPEIVEFWQGRENRMHNRIRVAN------G--RLERLQP 244 (246)
T ss_dssp HHHHHHHHTTCSSCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEET------T--EEEECCT
T ss_pred HHHHHHhcccCCCCCCCCcEEEEEEEcCEEEEccCCCCCCeEEEEEEC------C--CcEECCC
Confidence 999999997543699999999999999999999999999999999986 2 8999998
No 3
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=100.00 E-value=4.1e-52 Score=385.74 Aligned_cols=200 Identities=44% Similarity=0.803 Sum_probs=172.0
Q ss_pred CCCCchhhhhhccCCC--CcCcccC-CCChHHHHHHHHHHHHHc-CCCCCCceEEEeeCCCCce---------------E
Q 036952 107 APSVDISALRENYISP--EFLEEQV-ESDPINQFRKWFDDAIAA-GLREPNAMALSTVGKDGKP---------------F 167 (311)
Q Consensus 107 a~~~~~~~~r~~y~~~--~~~~~~~-~~dP~~~f~~Wl~~A~~~-~~~~p~a~~LATv~~dG~P---------------~ 167 (311)
...+|+++||++|... .|+++++ +.||+.+|+.||++|+++ +..+|++|+|||||+||.| +
T Consensus 29 ~~~~~~~~~r~~y~~~~~~l~~~~~~~~~P~~~f~~Wl~~A~~~~~l~e~~~~~LATvd~dG~P~~R~V~lk~~d~~gl~ 108 (261)
T 1nrg_A 29 SAAMDLGPMRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFR 108 (261)
T ss_dssp --------------------CCSSCSCSSHHHHHHHHHHHHHHCTTCSCTTEEEEEEECTTSCEEEEEEECCCEETTEEE
T ss_pred cCcCCHHHHHHhhhcCCCCcCHHHcCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCCCeeEEEEEEEEEcCCEEE
Confidence 3467999999999988 8999999 999999999999999999 8999999999999999999 9
Q ss_pred EEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHH
Q 036952 168 WYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVL 244 (311)
Q Consensus 168 F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l 244 (311)
||||++|+ |+ +||++||+|+| ||| +.|||||+|+|++++++++++||++||++||++||+|+||++|.+|+.|
T Consensus 109 F~Tn~~S~-K~---~eL~~NP~vaL~f~~~~~~rqVrI~G~ae~v~d~e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l 184 (261)
T 1nrg_A 109 FFTNFESR-KG---KELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYL 184 (261)
T ss_dssp EEEETTSH-HH---HHHHHSCEEEEEEEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHH
T ss_pred EEECCCCh-hH---HHHhhCCeEEEEEEeCCCCEEEEEEEEEEEecCcchHHHHhcCChhhhhhhhcCCCCCccCCHHHH
Confidence 99999999 99 99999999999 999 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCCCCcceEEEeecCc-----------CCCCCcEEEEecC
Q 036952 245 YQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTSRLHDRLQYSPQEI-----------NGKRVWKINRLCP 311 (311)
Q Consensus 245 ~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~r~H~R~~y~r~~~-----------~~~~~W~~~rL~P 311 (311)
+++.+++.++|+++ ++|+|++||||+|+|++|||||++.+|+|+|++|++... .++++|+++||+|
T Consensus 185 ~~~~~~~~~~f~~~-~vp~p~~w~g~rv~P~~vEfwq~~~~rlHdR~~y~r~~~~~~~~~~~~~~~~~~~W~~~rL~P 261 (261)
T 1nrg_A 185 RKKNEELEQLYQDQ-EVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP 261 (261)
T ss_dssp HHHHHHHHHHTTTS-CCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred HHHHHHHHhhcccC-CCCCCCcEEEEEEEccEEEEEECCCCCCeEEEEEEECCccccccccccccCCCCCeEEEEccC
Confidence 99999999999764 589999999999999999999999999999999998420 0124799999998
No 4
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=100.00 E-value=2.9e-49 Score=353.33 Aligned_cols=180 Identities=41% Similarity=0.766 Sum_probs=172.2
Q ss_pred CcCcccCCCChHHHHHHHHHHHHHcCCCCCCceEEEeeCCCCce---------------EEEeCCCCccccccccccccC
Q 036952 123 EFLEEQVESDPINQFRKWFDDAIAAGLREPNAMALSTVGKDGKP---------------FWYSTSTGQVKSWCKRWLPVA 187 (311)
Q Consensus 123 ~~~~~~~~~dP~~~f~~Wl~~A~~~~~~~p~a~~LATv~~dG~P---------------~F~T~~~S~~K~~~~~eL~~N 187 (311)
.|++++++.||+.+|+.||++|++++..+|++|+|||||+||.| +||||++|+ |+ +||++|
T Consensus 2 ~~~~~~~~~~p~~~f~~wl~~a~~~~~~~~~~~~LATv~~dG~P~~R~v~~~~~d~~gl~F~T~~~S~-K~---~~L~~n 77 (199)
T 1dnl_A 2 GLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSR-KA---HQIENN 77 (199)
T ss_dssp CCCGGGCCSSHHHHHHHHHHHHHHTTCSCTTEEEEEEECTTSCEEEEEEECCEEETTEEEEEEETTSH-HH---HHHHHC
T ss_pred CCChhhcCCChHHHHHHHHHHHHHcCcCCCcEEEEEEECCCCCEEEEEEEEEEEcCCEEEEEECCCCH-HH---HHHhhC
Confidence 47788899999999999999999999999999999999999999 899999999 99 999999
Q ss_pred CceeE-eee--cCeeEEEEEEEEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCC
Q 036952 188 VETSI-FTY--QSTTVRVEGSVEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKP 264 (311)
Q Consensus 188 P~aal-f~w--~~rQVRv~G~a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p 264 (311)
|+|+| |+| ..+||||+|+|++++++++++||++||++||++||+|+||++|.+++.|+++.+++.++|+++ .+|+|
T Consensus 78 p~v~l~f~~~~~~~qvri~G~a~~v~d~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~-~~p~p 156 (199)
T 1dnl_A 78 PRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQG-EVPLP 156 (199)
T ss_dssp CEEEEEECCGGGTEEEEEEEEEEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTS-SCCCC
T ss_pred CeEEEEEEcCCCCEEEEEEEEEEEeCCccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCC-CCCCC
Confidence 99999 999 899999999999999999999999999999999999999999999999999999999999753 58999
Q ss_pred CCeeEEEEEceEEEEEeCCCCCCcceEEEeecCcCCCCCcEEEEecC
Q 036952 265 EFWGGYRLKPELFEFWQGQTSRLHDRLQYSPQEINGKRVWKINRLCP 311 (311)
Q Consensus 265 ~~w~gy~l~P~~iEfwq~~~~r~H~R~~y~r~~~~~~~~W~~~rL~P 311 (311)
++|+||+|+|++|||||++.+|+|+|++|++.. ++|+.+||+|
T Consensus 157 ~~~~~~~v~p~~vefw~~~~~rlh~R~~y~~~~----~~W~~~~l~P 199 (199)
T 1dnl_A 157 SFWGGFRVSLEQIEFWQGGEHRLHDRFLYQREN----DAWKIDRLAP 199 (199)
T ss_dssp TTEEEEEECCSEEEEEECCGGGCCEEEEEEECS----SSEEEEECCC
T ss_pred CceEEEEEECCEEEEEecCCCCCceEEEEEECC----CCEEEEEecC
Confidence 999999999999999999999999999999852 4799999998
No 5
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=100.00 E-value=4.7e-49 Score=357.78 Aligned_cols=193 Identities=25% Similarity=0.452 Sum_probs=172.4
Q ss_pred CCCchhhhhhccCCCCcCcccCCCChHHHHHHHHHHHHHcCCCCCCceEEEeeCCCCce---------------EEEeCC
Q 036952 108 PSVDISALRENYISPEFLEEQVESDPINQFRKWFDDAIAAGLREPNAMALSTVGKDGKP---------------FWYSTS 172 (311)
Q Consensus 108 ~~~~~~~~r~~y~~~~~~~~~~~~dP~~~f~~Wl~~A~~~~~~~p~a~~LATv~~dG~P---------------~F~T~~ 172 (311)
..+++..+|..|...-...++++.||+.||+.||++|++++..+|++|+|||||+||.| +||||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~f~~Wl~~A~~~~~~~~~~~~LATvd~dG~P~~R~v~l~~~d~~gl~F~T~~ 91 (222)
T 1ty9_A 12 GKGMSESLTGTLDAPFPEYQTLPADPMSVLHNWLERARRVGIREPRALALATADSQGRPSTRIVVISEISDAGVVFSTHA 91 (222)
T ss_dssp ---------CCSCCCCTHHHHCCSCHHHHHHHHHHHHHHHTCSSTTEEEEEEECTTCCEEEEEEECCEECSSEEEEEEET
T ss_pred cccchhhhccccccCCCChhccCCCHHHHHHHHHHHHHHhccCCCCEEEEEEECCCCCEEEEEEEEEEEcCCEEEEEECC
Confidence 34577778888887766677899999999999999999999999999999999999999 899999
Q ss_pred CCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHH
Q 036952 173 TGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYK 249 (311)
Q Consensus 173 ~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~ 249 (311)
+|+ |+ +||++||+|+| ||| ..+||||+|+|++++++++++||++||++||++||+|+||.+|++++.|+++..
T Consensus 92 ~S~-K~---~eL~~nP~val~f~~~~~~rqvrI~G~ae~v~~~~~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~ 167 (222)
T 1ty9_A 92 GSQ-KG---RELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAAR 167 (222)
T ss_dssp TSH-HH---HHHHHCCEEEEEEEETTTTEEEEEEEEEEECCHHHHHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHH
T ss_pred CCc-ch---HHHhhCCeEEEEEEcCCCCeEEEEEEEEEEEccHHhHHHHHhCccccccceeeccCCCcCCChHHHHHHHH
Confidence 999 99 99999999999 999 899999999999999999999999999999999999999999999999999887
Q ss_pred HHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCCCCcceEEEeecCcCCCCCcEEEEecC
Q 036952 250 ELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTSRLHDRLQYSPQEINGKRVWKINRLCP 311 (311)
Q Consensus 250 ~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~r~H~R~~y~r~~~~~~~~W~~~rL~P 311 (311)
++.++ +..+|+|++||||+|+|++|||||++.+|+|+|++|++.. ++|+.+||+|
T Consensus 168 ~~~~~---~~~~p~p~~w~~~rv~P~~vEfwq~~~~rlHdR~~y~~~~----~~W~~~rL~P 222 (222)
T 1ty9_A 168 QLAEL---QGPLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSD----TGWNVRRLQP 222 (222)
T ss_dssp HHHTS---CSCCCCCTTEEEEEEEEEEEEEEEEEETTEEEEEEEEEET----TEEEEEEECC
T ss_pred HHhhc---cCCCCCCCCEEEEEEEeeEEEEEECCCCCCcEEEEEEECC----CCEEEEEecC
Confidence 77654 2358999999999999999999999999999999999852 4799999998
No 6
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=100.00 E-value=5.5e-40 Score=292.26 Aligned_cols=162 Identities=13% Similarity=0.207 Sum_probs=143.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCC--ceEEEeeCCCCce-----------------EEEeCCCCccccccccccccCCceeE-
Q 036952 133 PINQFRKWFDDAIAAGLREPN--AMALSTVGKDGKP-----------------FWYSTSTGQVKSWCKRWLPVAVETSI- 192 (311)
Q Consensus 133 P~~~f~~Wl~~A~~~~~~~p~--a~~LATv~~dG~P-----------------~F~T~~~S~~K~~~~~eL~~NP~aal- 192 (311)
|+..|+.||++|++++..+|+ +|+|||||+||.| +||||++|+ |+ +||++||+|+|
T Consensus 3 ~~~~w~~wl~~a~~~~~~~p~~~~~~LATv~~dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~-K~---~~l~~np~v~l~ 78 (195)
T 2i51_A 3 SLAPWRGAIAHALHRNRSLVYARYLQLATVQPNGRPANRTLVFRGFLEDTNQLRFITDTRSA-KA---DQIQQQPWAEIC 78 (195)
T ss_dssp CCCTTHHHHHHHHHHTTTCGGGGEEEEEEECTTSCEEEEEEECCCBCTTSSCEEEEEETTSH-HH---HHHHHCCEEEEE
T ss_pred chhHHHHHHHHHHHhCCCCCCCCEEEEEEECCCCCeeEEEEEEEEEcCCCCeEEEEEcCCcc-HH---HHHhhCCeEEEE
Confidence 455789999999999988888 6999999999999 899999999 99 99999999999
Q ss_pred eee--cCeeEEEEEEEEEeChHHHH--------HHHhcCCcccccc-eecCCCCCCCCChHHHHHHHHHHHhhccCCCCC
Q 036952 193 FTY--QSTTVRVEGSVEKVSDEESE--------QYFHSRPRGSQIG-AIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLI 261 (311)
Q Consensus 193 f~w--~~rQVRv~G~a~~l~~~es~--------~yf~~rp~~sqi~-a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~ 261 (311)
||| +.+||||+|+|+++++++++ +||+++|.++|+. +|+|+| ++|.+.. +++.++|. ..+
T Consensus 79 f~~~~~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg-~~~~~~~------~~~~~~~~--~~~ 149 (195)
T 2i51_A 79 WYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPG-KPRIKES------GAFEPSPP--DPI 149 (195)
T ss_dssp EEETTTTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTT-SBCCCCG------GGGCCCCC--CSS
T ss_pred EEeCCCCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCC-CCccchh------HHhhhhcc--CCC
Confidence 999 89999999999999998885 9999999999995 899885 7776443 23445555 358
Q ss_pred CCCCCeeEEEEEceEEEEEeCCCCCCcceEEEeecCcCCCCCcEEEEecC
Q 036952 262 PKPEFWGGYRLKPELFEFWQGQTSRLHDRLQYSPQEINGKRVWKINRLCP 311 (311)
Q Consensus 262 p~p~~w~gy~l~P~~iEfwq~~~~r~H~R~~y~r~~~~~~~~W~~~rL~P 311 (311)
|+|++||||+|+|++|||||++++| |+|++|++.. +++|..+||+|
T Consensus 150 p~p~~w~~~~v~P~~iefwq~~~~r-h~R~~y~~~~---~~~W~~~rl~P 195 (195)
T 2i51_A 150 EPVPNFCLLLLDPVQVDHLELRGEP-QNRWLYHRND---QQEWSSEAINP 195 (195)
T ss_dssp SCCTTEEEEEEEEEEEEEEESSSSS-CEEEEEEECT---TSCEEEEEBCC
T ss_pred CCCCceEEEEEEccEEEEEecCCCC-ceEEEEEECC---CCCEEEEEeCC
Confidence 9999999999999999999999999 9999999852 24799999998
No 7
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=99.98 E-value=1.1e-32 Score=241.43 Aligned_cols=130 Identities=17% Similarity=0.289 Sum_probs=119.9
Q ss_pred CCCCC-CceEEEeeCCCCce-----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEE
Q 036952 148 GLREP-NAMALSTVGKDGKP-----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSV 206 (311)
Q Consensus 148 ~~~~p-~a~~LATv~~dG~P-----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a 206 (311)
+..+| ++|+|||||+|| | +|+||++|+ |+ +||++||+|+| ||| ..+||||+|+|
T Consensus 24 ~~~~p~~~~~LATv~~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~-K~---~~l~~nP~v~l~f~~~~~~~qvri~G~a 98 (175)
T 2ou5_A 24 DRHHPARHPTLATIGTDG-PDLRTLVLRAASHAEATLEFHTDAASP-KV---AHIRRDARVAIHIWIPKASLQVRAKAIA 98 (175)
T ss_dssp CTTSGGGSCEEEEEETTE-EEEEECCCCEEETTTTEEEEEEETTSH-HH---HHHHHCCEEEEEEEEGGGTEEEEEEEEE
T ss_pred cCCCCcceEEEEEeCCCC-CceeEEEEEEEEcCCCEEEEEECCCCh-HH---HHHhhCCcEEEEEEeCCCCEEEEEEEEE
Confidence 56677 999999999999 9 899999999 99 99999999999 999 89999999999
Q ss_pred EEeChHHHHHHHhcCCcccccceecC-CCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCC
Q 036952 207 EKVSDEESEQYFHSRPRGSQIGAIVS-KQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTS 285 (311)
Q Consensus 207 ~~l~~~es~~yf~~rp~~sqi~a~~s-~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~ 285 (311)
++++++ ++||+++|+++|++ |++ .||.++.+ + .+|+|++|+||+|.|++|||||++.+
T Consensus 99 ~~~~d~--~~~w~~~~~~~~~~-~~~~~~~~~~~~--~----------------l~~~p~~~~~~~v~p~~vefw~~~~~ 157 (175)
T 2ou5_A 99 KILPGD--PNLFAQLPEAARMN-YQGPVPGTPLPA--E----------------PDATPNRFTRLICHLSEIDVLHLTTP 157 (175)
T ss_dssp EEEECC--HHHHHHSCHHHHGG-GSSSCTTCBSSC--C----------------CCCCSCCEEEEEEEEEEEEEEECCSS
T ss_pred EEeCcH--HHHHHHCCHhHHhc-ccCCCCCCcccc--c----------------cCCCCCcEEEEEEEeeEEEEEeCCCC
Confidence 999988 89999999999999 787 59999976 1 16889999999999999999999998
Q ss_pred CCcceEEEeecCcCCCCCcEEEEecC
Q 036952 286 RLHDRLQYSPQEINGKRVWKINRLCP 311 (311)
Q Consensus 286 r~H~R~~y~r~~~~~~~~W~~~rL~P 311 (311)
|+|++|++. + |+.+||+|
T Consensus 158 --h~R~~y~~~-----~-W~~~~l~P 175 (175)
T 2ou5_A 158 --HQRAVYTAP-----D-WRGIWVSP 175 (175)
T ss_dssp --CEEEEEETT-----T-CCCEEECC
T ss_pred --ceEEEEEcC-----C-ceEEEecC
Confidence 999999973 4 99999998
No 8
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=99.93 E-value=2.4e-26 Score=211.39 Aligned_cols=95 Identities=37% Similarity=0.738 Sum_probs=90.5
Q ss_pred CCCchHHHHHHHHHhccCCCCCCCCC--CcEEEEEcCCCCCCCCCCCCCCccccCeEEeccccccccccC--CCCcceee
Q 036952 1 TPRPPFDDLIKRLLCLHGYDQTRQKR--PVIVSVDIPSGWHVEEGDIGDEGIKPDMLVSLTAPKLCAKKS--SGPHHFLG 76 (311)
Q Consensus 1 ~lr~~~~~~i~~in~~~~~~~~~~~~--~~vvaiDiPSG~~~d~G~~~~~~i~ad~tit~~~pK~g~~~~--~g~~~~~G 76 (311)
+++++++++|+.||++ + .+|||||||||||+|||.+.+.+|+||+||||++||+|++++ +|++||+|
T Consensus 148 ~l~~~~~~~I~~iN~~---------~~~~~vvAvDiPSGl~~dtG~~~g~av~Ad~TvTf~~~K~gl~~~~~~g~~~~~G 218 (246)
T 1jzt_A 148 PMREPFKGIVEELCKV---------QNIIPIVSVDVPTGWDVDKGPISQPSINPAVLVSLTVPKPCSSHIRENQTTHYVG 218 (246)
T ss_dssp SCCTTHHHHHHHHHHH---------TTTSCEEEESSCTTSBTTTBCCSSSCCCCSEEEEESSCCGGGGGSCTTTCEEEEE
T ss_pred CCcHHHHHHHHHHHhc---------CCCCCEEEEECCCCccCCCCCcCCCeEcCCEEEECcchHHHHcCCccCCccceEC
Confidence 5899999999999987 6 799999999999999999999999999999999999999999 99746999
Q ss_pred cEEeChhhHhhcCCCCCCCCCCcceeee
Q 036952 77 GRFVPPVIADKYKLRLPPYPGTSMCVRI 104 (311)
Q Consensus 77 g~~iP~~~~~~~~~~~p~y~~~~~~v~l 104 (311)
++|||+.+.++|++.+|+|+|++||++|
T Consensus 219 ~~~vP~~~~~~~~~~~p~y~~~~~~~~~ 246 (246)
T 1jzt_A 219 GRFIPRDFANKFGFEPFGYESTDQILKL 246 (246)
T ss_dssp CCCCCHHHHHHTTCCCCCCCTTCSEEEC
T ss_pred CeeeCHHHHHhcCccCCCCCCcceEEeC
Confidence 9999999999999999999999999986
No 9
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=99.92 E-value=1.9e-25 Score=207.46 Aligned_cols=95 Identities=49% Similarity=0.909 Sum_probs=89.1
Q ss_pred CCCchHHHHHHHHHhccCCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCccccCeEEeccccccccccCCCCcceeecEEe
Q 036952 1 TPRPPFDDLIKRLLCLHGYDQTRQKRPVIVSVDIPSGWHVEEGDIGDEGIKPDMLVSLTAPKLCAKKSSGPHHFLGGRFV 80 (311)
Q Consensus 1 ~lr~~~~~~i~~in~~~~~~~~~~~~~~vvaiDiPSG~~~d~G~~~~~~i~ad~tit~~~pK~g~~~~~g~~~~~Gg~~i 80 (311)
+++++++++|+.||++ +.+|||||||||||+|||.+. +|+||+||||++||+|+++++|+.+|+|++||
T Consensus 166 ~l~~~~~~lI~~iN~~---------~~~VvAVDIPSGldadtG~~~--av~Ad~TVTf~~~K~g~~~~~g~~~~~G~~~v 234 (265)
T 2o8n_A 166 DVREPFHSILSVLSGL---------TVPIASIDIPSGWDVEKGNPS--GIQPDLLISLTAPKKSATHFTGRYHYLGGRFV 234 (265)
T ss_dssp CCCTTHHHHHHHHHTC---------SSCEEEESSCTTSBTTTBCTT--SCCCSEEEEESSCBGGGGGCCSSEEEEECCCC
T ss_pred CCcHHHHHHHHHHHhc---------CCCEEEEeCCCCcccCCCCcC--eeeCCEEEECCchhhhhcCCCCccceECCeec
Confidence 5899999999999986 679999999999999999886 99999999999999999999997469999999
Q ss_pred ChhhHhhcCCCCCCCCCCcceeeeCC
Q 036952 81 PPVIADKYKLRLPPYPGTSMCVRIGK 106 (311)
Q Consensus 81 P~~~~~~~~~~~p~y~~~~~~v~l~~ 106 (311)
|+.+.++|++.+|+|||++||++|-.
T Consensus 235 P~~l~~k~~l~lp~y~~~~~~~~~~~ 260 (265)
T 2o8n_A 235 PPALEKKYQLNLPSYPDTECVYRLQH 260 (265)
T ss_dssp CHHHHHHTTCCCCCCCTTCSEEECC-
T ss_pred CHHHHHHhCCCCCCCCCcceEEEeec
Confidence 99999999999999999999999853
No 10
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.73 E-value=8.8e-18 Score=143.08 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=90.8
Q ss_pred CCCCceEEEeeCCC-Cce--------------EEEeCCCCccccccccccccCCceeE-eeecCeeEEEEEEEEEeChHH
Q 036952 150 REPNAMALSTVGKD-GKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVSDEE 213 (311)
Q Consensus 150 ~~p~a~~LATv~~d-G~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~~~e 213 (311)
.+.+.++|||++.| |.| +|+|+..|+ |+ ++|++||+||| |+|..++|+|+|+|+.+++++
T Consensus 22 ~~~~~~~LaT~~~d~G~P~~~pv~~~~d~~~l~f~t~~~s~-K~---~~l~~np~Vsl~v~~~~~~v~v~G~a~~v~d~~ 97 (155)
T 2iab_A 22 ELDVDAWVSTAGADGGAPYLVPLSYLWDGETFLVATPAASP-TG---RNLSETGRVRLGIGPTRDLVLVEGTALPLEPAG 97 (155)
T ss_dssp HHCCEEEEEEECTTSSCEEEEEEECEECSSCEEEEEETTSH-HH---HHHHHHCEEEEEESSTTCEEEEEEEEEEECGGG
T ss_pred hCCCeEEEEEecCCCCCceEEEEEEEEECCEEEEEECCCCH-HH---HHHhhCCcEEEEEEcCCCEEEEEEEEEEecCch
Confidence 36788999999999 999 899999999 99 99999999999 988779999999999998654
Q ss_pred HHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCCCCcceEEE
Q 036952 214 SEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTSRLHDRLQY 293 (311)
Q Consensus 214 s~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~r~H~R~~y 293 (311)
++++..+.+.++|......+. +.|++|+|.|++|+||++ .+|+|+|.+|
T Consensus 98 -----------------------------~~~~~~~~~~~k~~~~~~~~~-~~~~~~ri~p~~v~~w~~-~~~l~~r~~~ 146 (155)
T 2iab_A 98 -----------------------------LPDGVGDTFAEKTGFDPRRLT-TSYLYFRISPRRVQAWRE-ANELSGRELM 146 (155)
T ss_dssp -----------------------------CCTTHHHHHHHHHSCCGGGCS-SCEEEEEEEEEEEEEESS-GGGSTTCEEE
T ss_pred -----------------------------hHHHHHHHHHHHhCCCccccC-CCEEEEEEEEEEEEEecC-CCCcCcceEE
Confidence 111112334445531111223 459999999999999997 7889999999
Q ss_pred eecCcCCCCCcEE
Q 036952 294 SPQEINGKRVWKI 306 (311)
Q Consensus 294 ~r~~~~~~~~W~~ 306 (311)
+ . +.|..
T Consensus 147 ~-~-----~~w~~ 153 (155)
T 2iab_A 147 R-D-----GEWLV 153 (155)
T ss_dssp E-T-----TEECC
T ss_pred E-C-----Ceeee
Confidence 7 2 36864
No 11
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.66 E-value=1.8e-16 Score=135.64 Aligned_cols=98 Identities=7% Similarity=0.143 Sum_probs=77.3
Q ss_pred CCCCceEEEeeCCCCce-----------------EEEeCCCCccccccccccccCCc-eeE-eee--cCeeEEEEEEEEE
Q 036952 150 REPNAMALSTVGKDGKP-----------------FWYSTSTGQVKSWCKRWLPVAVE-TSI-FTY--QSTTVRVEGSVEK 208 (311)
Q Consensus 150 ~~p~a~~LATv~~dG~P-----------------~F~T~~~S~~K~~~~~eL~~NP~-aal-f~w--~~rQVRv~G~a~~ 208 (311)
.+...++||| ||.| +|+|+..|+ |+ ++|++||+ ||| |+| ..+||+|+|+|+.
T Consensus 14 ~~~~~~~LaT---dG~P~~rpv~~~~~~~~g~~l~f~t~~~s~-K~---~~l~~np~~v~l~~~~~~~~~~v~v~G~a~~ 86 (160)
T 2qea_A 14 EDVRSGMLGI---KGQGRLIPMSPQTDDDAPGAIWFITAKGTD-LA---KGVAAGPQPAQFVVSDDGEGLYADLDGTLER 86 (160)
T ss_dssp TTCCCEEEEE---TTSSCCEEECCBCCTTSCSCEEEEEETTSH-HH---HHTSSSCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred hcCCEEEEEe---CCCeeEEEeeeeEecCCCCEEEEEECCCCH-HH---HHHHhCCceEEEEEECCCCCeEEEEEEEEEE
Confidence 3566677888 6776 799999999 99 99999999 999 999 7899999999999
Q ss_pred eChH-HHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhc-cCCCCCCCCCCeeEEEEEceEEEEEeCCCCC
Q 036952 209 VSDE-ESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKF-SDWSLIPKPEFWGGYRLKPELFEFWQGQTSR 286 (311)
Q Consensus 209 l~~~-es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~-~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~r 286 (311)
+++. +.++.| ..+.++| ++ -|.+++|++|+|.|+++|||+++.+|
T Consensus 87 v~d~~~~~~~~------------------------------~~~~~~~~~~---~~~~p~~~v~~i~p~~~e~w~~~~~~ 133 (160)
T 2qea_A 87 STDREALDEFW------------------------------SFVADAWFDG---GQHDPDVCLLKFTPASGEISITEGGG 133 (160)
T ss_dssp ECCHHHHHHSC------------------------------CHHHHHHCTT---CSSCTTEEEEEEEEEEEEEEEECCSS
T ss_pred EcCHHHHHHHH------------------------------HHHHHHHccC---CCCCCCEEEEEEECCEEEEEECCCCh
Confidence 8753 333333 2233333 32 25677999999999999999998876
Q ss_pred C
Q 036952 287 L 287 (311)
Q Consensus 287 ~ 287 (311)
+
T Consensus 134 l 134 (160)
T 2qea_A 134 A 134 (160)
T ss_dssp H
T ss_pred H
Confidence 4
No 12
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.64 E-value=3.1e-16 Score=132.49 Aligned_cols=98 Identities=11% Similarity=0.186 Sum_probs=76.9
Q ss_pred CCceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeChH
Q 036952 152 PNAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSDE 212 (311)
Q Consensus 152 p~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~~ 212 (311)
.+.++|||++.+|-. +|+|+..|+ |+ ++|++||+|+| |+| ..+||+|+|+|+.+++.
T Consensus 19 ~~~~~LaT~~~d~~~~~pm~~~~~~d~~g~l~F~T~~~s~-K~---~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d~ 94 (147)
T 3dmb_A 19 DRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNA-LI---AMLGQGRRVIGAFSSKGHDLFASISGSLREDTDP 94 (147)
T ss_dssp HCEEEEEETTSSSCCCEEEEEECSSSSCCCEEEEECTTCT-TH---HHHTTCEEEEEEEECTTSSEEEEEEEEEEECCCH
T ss_pred CCEEEEEEEcCCCCceEeCccccccCCCceEEEEecCCcH-HH---HHHhhCCeEEEEEEcCCCCeEEEEEEEEEEecCH
Confidence 456778888766511 999999999 99 99999999999 999 78999999999999874
Q ss_pred -HHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCC
Q 036952 213 -ESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTS 285 (311)
Q Consensus 213 -es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~ 285 (311)
..+++|.. -+...|+++ +.+++|++|+|.|+++|||+++.+
T Consensus 95 ~~~~~~~~~-----------------------------~~~~~~~~g---~~dp~~~vl~v~p~~~e~W~~~~~ 136 (147)
T 3dmb_A 95 AVVDRLWNP-----------------------------YVAAWYEGG---KDDPKLALLRLDADHAQIWLNGSS 136 (147)
T ss_dssp HHHHHHCCH-----------------------------HHHHHCTTG---GGCTTCEEEEEEEEEEEEEECCCC
T ss_pred HHHHHHhhH-----------------------------HHHHHccCC---CCCCCEEEEEEEcCEEEEEECCCC
Confidence 45555511 011223322 457799999999999999999875
No 13
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.60 E-value=1.5e-15 Score=124.71 Aligned_cols=96 Identities=14% Similarity=0.237 Sum_probs=77.1
Q ss_pred CCCceEEEeeCCCCce-----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeC
Q 036952 151 EPNAMALSTVGKDGKP-----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVS 210 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P-----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~ 210 (311)
+++.++|||+++||.| +|+|+..|+ |. ++|++||+||| |+| ..+||+|+|+|+.++
T Consensus 17 ~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~-K~---~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~ 92 (134)
T 2re7_A 17 DVKFAMISTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKTSD-VV---KDIQDDARIGLTYATQDEKNYVSISGDAELPT 92 (134)
T ss_dssp HCSCEEEEEECTTSCEEEEEECCSEEETTTTEEEEEEETTSH-HH---HHHHHCCEEEEEEECTTSSCEEEEEEEEECCC
T ss_pred cCCEEEEEEEcCCCCEEEEecEeeeecCCCceEEEEECCCCH-HH---HHHhhCCcEEEEEEcCCCCeEEEEEEEEEEEC
Confidence 5678999999999999 899999999 99 99999999999 999 689999999999987
Q ss_pred hH-HHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhh-ccCCCCCCCCCCeeEEEEEceEEEEEeCC
Q 036952 211 DE-ESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEK-FSDWSLIPKPEFWGGYRLKPELFEFWQGQ 283 (311)
Q Consensus 211 ~~-es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~-~~~~~~~p~p~~w~gy~l~P~~iEfwq~~ 283 (311)
+. +.++.| ..+..+ |++ -+.+++|++|+|.|+++|||+++
T Consensus 93 d~~~~~~~~------------------------------~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~w~~~ 134 (134)
T 2re7_A 93 DKAKLDELW------------------------------SPVYSAFFAN---GKEDANIQLIKVVPHGVECWLSG 134 (134)
T ss_dssp CHHHHHHHC------------------------------CHHHHHTSTT---GGGCTTEEEEEEEEEEEEEECCC
T ss_pred CHHHHHHHh------------------------------hHHHHHHccC---CCCCCCEEEEEEEeCEEEEecCC
Confidence 64 333333 111222 322 13456899999999999999974
No 14
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.58 E-value=7.6e-16 Score=154.42 Aligned_cols=76 Identities=24% Similarity=0.352 Sum_probs=68.3
Q ss_pred CCCchHHHHHHHHHhccCCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCccccCeEEeccccccccccCCCCcceeecEE-
Q 036952 1 TPRPPFDDLIKRLLCLHGYDQTRQKRPVIVSVDIPSGWHVEEGDIGDEGIKPDMLVSLTAPKLCAKKSSGPHHFLGGRF- 79 (311)
Q Consensus 1 ~lr~~~~~~i~~in~~~~~~~~~~~~~~vvaiDiPSG~~~d~G~~~~~~i~ad~tit~~~pK~g~~~~~g~~~~~Gg~~- 79 (311)
+++++++++|+.||++ +.+|||||||||||+|||.+.+.+|+||+||||++||+|+++++|+ +|+|...
T Consensus 136 ~l~~~~~~~i~~iN~~---------~~~vvAvDiPSGl~~dtG~~~g~av~Ad~Tvtf~~~K~gl~~~~g~-~~~G~v~v 205 (502)
T 3rss_A 136 EITGEYAEIINLVNKS---------GKVVVSVDVPSGIDSNTGKVLRTAVKADLTVTFGVPKIGHILFPGR-DLTGKLKV 205 (502)
T ss_dssp CCCHHHHHHHHHHHTT---------CCEEEEESSCTTBCTTTCCBSSCCCCCSEEEEESSCCHHHHSTTHH-HHHCEEEE
T ss_pred CCcHHHHHHHHHHHcC---------CCCEEEecCCCCccCCCCCcCCCeeeCCEEEECcchHHHHhccchh-hccceEEE
Confidence 5899999999999986 6899999999999999999999999999999999999999999998 7998666
Q ss_pred ----eChhhHh
Q 036952 80 ----VPPVIAD 86 (311)
Q Consensus 80 ----iP~~~~~ 86 (311)
||+.+.+
T Consensus 206 ~dIGip~~~~~ 216 (502)
T 3rss_A 206 ANIGHPVHLIN 216 (502)
T ss_dssp ECCSCCHHHHT
T ss_pred EcCCCChHHhh
Confidence 4655543
No 15
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.51 E-value=3.2e-14 Score=120.63 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=82.8
Q ss_pred CCCceEEEeeCCCCce---------------EEEeCCCCccccccccccccCCceeE-eee-cCeeEEEEEEEEEeChH-
Q 036952 151 EPNAMALSTVGKDGKP---------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-QSTTVRVEGSVEKVSDE- 212 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P---------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-~~rQVRv~G~a~~l~~~- 212 (311)
++..++|||++ +|.| +|+|+.+|+ |. ++|++||+|++ |+| -.+||+|+|+|+.+++.
T Consensus 29 ~~~~~~LaTv~-dG~P~~rpv~~~~~~~~~l~f~t~~~s~-K~---~~l~~np~V~l~~~~~~~~~v~i~G~a~~v~d~e 103 (150)
T 2ig6_A 29 ECGVFYLATNE-GDQPRVRPFGAVFEYEGKLYIVSNNTKK-CF---KQMIQNPKVEISGMNKKGQWIRLTGEVANDDRRE 103 (150)
T ss_dssp HHCSEEEEEEE-TTEEEEEEECCCEEETTEEEEEEETTSH-HH---HHHHHCCEEEEEEECTTSCEEEEEEEEEECCCHH
T ss_pred hCCeEEEEEcc-CCceEEEEeEEEEEcCCEEEEEeCCCcH-HH---HHHHHCCCEEEEEEcCCCeEEEEEEEEEEECCHH
Confidence 46789999999 9999 899999999 99 99999999999 999 88999999999999985
Q ss_pred HHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCC
Q 036952 213 ESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQT 284 (311)
Q Consensus 213 es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~ 284 (311)
+.+++|..+|..+++ | + +..+..+.|+|.|.+++||....
T Consensus 104 ~~~~~~~~~p~~~~~---------------------------~-~----~~dp~~~l~~v~~~~a~~wd~~~ 143 (150)
T 2ig6_A 104 VKELALEAVPSLKNM---------------------------Y-S----VDDGIFAVLYFTKGEGTICSFKG 143 (150)
T ss_dssp HHHHHHHHSGGGGGT---------------------------C-C----TTSSCEEEEEEEEEEEEEECSSS
T ss_pred HHHHHHHhChHHHHh---------------------------h-c----CCCCcEEEEEEECCEEEEEeCCC
Confidence 568999888765443 2 1 11246899999999999998754
No 16
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.49 E-value=1.2e-13 Score=115.96 Aligned_cols=100 Identities=14% Similarity=0.190 Sum_probs=80.9
Q ss_pred CCCceEEEeeCCCCce---------------EEEeCCCCccccccccccccCCceeE-eee-c---CeeEEEEEEEEEeC
Q 036952 151 EPNAMALSTVGKDGKP---------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-Q---STTVRVEGSVEKVS 210 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P---------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-~---~rQVRv~G~a~~l~ 210 (311)
+.+.+.|||++.||.| +|+|+..|+ |. ++|++||+||+ |++ - .+||+|+|+|+.++
T Consensus 13 ~~~~~~LaTv~~dG~P~~~p~~~~~~~~~~l~f~t~~~s~-k~---~~l~~np~V~l~~~~~~~~~~~~v~i~G~a~~v~ 88 (150)
T 2hhz_A 13 DMKVGVFATLDEYGNPHARHAHITAANEEGIFFMTSPETH-FY---DQLMGDQRVAMTAISEEGYLIQVVRVEGTARPVE 88 (150)
T ss_dssp HTCEEEEEEECTTCCEEEEEEEEEEEETTEEEEEECTTSH-HH---HHHHHCCEEEEEEEECSTTCCEEEEEEEEEEEEC
T ss_pred cCCeEEEEEECCCCCEEEEEEEEEEEcCCEEEEEecCCCH-HH---HHHhhCCeEEEEEEcCCcceeEEEEEEEEEEECC
Confidence 4678999999999999 899999999 99 99999999999 888 3 49999999999999
Q ss_pred hHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCC
Q 036952 211 DEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTS 285 (311)
Q Consensus 211 ~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~ 285 (311)
+++..++|+.+|...+ .|.+ +..+..+.|+|.|.+++||.....
T Consensus 89 d~~~~~~~~~~p~~~~---------------------------~~~~----~~~~~~~v~~i~~~~~~~~d~~~~ 132 (150)
T 2hhz_A 89 NDYLKTVFADNPYYQH---------------------------IYKD----ESSDTMQVFQIYAGHGFYHSLTQG 132 (150)
T ss_dssp HHHHHHHHTTCGGGGG---------------------------GCC---------CCEEEEEEEEEEEEEEGGGT
T ss_pred cHHHHHHHHhChhhhh---------------------------cccC----CCCCcEEEEEEEccEEEEEECCCC
Confidence 9888788866543221 1211 223478999999999999998754
No 17
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.48 E-value=1.1e-13 Score=115.59 Aligned_cols=98 Identities=12% Similarity=0.271 Sum_probs=78.1
Q ss_pred CCCCceEEEeeCCCCce-----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEe
Q 036952 150 REPNAMALSTVGKDGKP-----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKV 209 (311)
Q Consensus 150 ~~p~a~~LATv~~dG~P-----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l 209 (311)
.+++.++|||+++||.| +|+|+..|+ |. ++|++||+||| |++ ..+||+|+|+|+.+
T Consensus 20 ~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~-k~---~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v 95 (148)
T 2i02_A 20 KNIDYGMFTTVDDDGSLHSYPMSKSGDINSEATLWFFTYAGSH-KV---TEIEHHEQVNVSFSSPEQQRYVSISGTSQLV 95 (148)
T ss_dssp TTCCEEEEEEECTTSCEEEEEEECBCC---CCEEEEEEETTSH-HH---HHHHHCCEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred hcCCEEEEEEEcCCCCEEEEEeEeeEEEcCCCeEEEEEcCCCH-HH---HHHHhCCcEEEEEEcCCCCeEEEEEEEEEEE
Confidence 47889999999999999 899999999 99 99999999999 999 68999999999999
Q ss_pred ChHHH-HHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhc-cCCCCCCCCCCeeEEEEEceEEEEEeCCC
Q 036952 210 SDEES-EQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKF-SDWSLIPKPEFWGGYRLKPELFEFWQGQT 284 (311)
Q Consensus 210 ~~~es-~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~-~~~~~~p~p~~w~gy~l~P~~iEfwq~~~ 284 (311)
++++. .+.|... ..+| +++ +..+.|++|+|.|++++||++..
T Consensus 96 ~d~~~~~~~~~~~------------------------------~~~~~~~~---~~~~~~~v~~i~~~~~~~~~~~~ 139 (148)
T 2i02_A 96 KDRNKMRELWKPE------------------------------LQTWFPKG---LDEPDIALLKVNINQVNYWDSTS 139 (148)
T ss_dssp CCHHHHHHHCCGG------------------------------GGGTCTTG---GGCTTEEEEEEEEEEEEEEEGGG
T ss_pred cCHHHHHHHHhHH------------------------------HHHHccCC---CCCCCEEEEEEEeCEEEEEcCCC
Confidence 87544 4555221 1111 111 11246899999999999999853
No 18
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=99.44 E-value=1.9e-14 Score=143.35 Aligned_cols=73 Identities=23% Similarity=0.354 Sum_probs=64.1
Q ss_pred CCCchHHHHHHHHHhccCCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCccccCeEEeccccccccccCCCCcceeecEE-
Q 036952 1 TPRPPFDDLIKRLLCLHGYDQTRQKRPVIVSVDIPSGWHVEEGDIGDEGIKPDMLVSLTAPKLCAKKSSGPHHFLGGRF- 79 (311)
Q Consensus 1 ~lr~~~~~~i~~in~~~~~~~~~~~~~~vvaiDiPSG~~~d~G~~~~~~i~ad~tit~~~pK~g~~~~~g~~~~~Gg~~- 79 (311)
+++++|+ |+.||++ +.+|||||||||||+| |.+.+.+|+||+||||++||+|+++++|+ +|+|...
T Consensus 131 ~l~~~~~--I~~iN~~---------~~~vvAvDiPSGl~~d-G~~~g~av~Ad~TvTf~~~K~gl~~~~~~-~~~G~v~v 197 (475)
T 3k5w_A 131 KLEPFLN--FESLSQK---------ARFKIACDIPSGIDSK-GRVDKRAFKADLTISMGAIKSCLLSDRAK-DYVGELKV 197 (475)
T ss_dssp CCCTTCC--HHHHTTT---------EEEEEEESSCTTBCTT-SCBCTTCCCCSEEEEESSEEGGGGCGGGH-HHHCEEEE
T ss_pred CCChHHH--HHHHHhC---------CCCEEEEECCCCCCCC-CCcCCceeeCCEEEECcChHHHhcCcchH-hhcCCeEE
Confidence 5788888 9999976 6799999999999999 99889999999999999999999999998 7998666
Q ss_pred ----eChhhHh
Q 036952 80 ----VPPVIAD 86 (311)
Q Consensus 80 ----iP~~~~~ 86 (311)
||+.+.+
T Consensus 198 ~dIGip~~~~~ 208 (475)
T 3k5w_A 198 GHLGVFNPIYE 208 (475)
T ss_dssp ECCSSCHHHHC
T ss_pred eCCCCChHHhc
Confidence 4665533
No 19
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=99.43 E-value=1.1e-13 Score=130.77 Aligned_cols=87 Identities=16% Similarity=0.214 Sum_probs=70.3
Q ss_pred CC--chHHHHHHHHHhccCCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCccccCeEEeccccccccccCCCCcceeecEE
Q 036952 2 PR--PPFDDLIKRLLCLHGYDQTRQKRPVIVSVDIPSGWHVEEGDIGDEGIKPDMLVSLTAPKLCAKKSSGPHHFLGGRF 79 (311)
Q Consensus 2 lr--~~~~~~i~~in~~~~~~~~~~~~~~vvaiDiPSG~~~d~G~~~~~~i~ad~tit~~~pK~g~~~~~g~~~~~Gg~~ 79 (311)
|+ ++++++|++||++ +.+||||||||||. +.+|+||+||||++||.| ..+.|. .+++++.
T Consensus 217 l~~~~~~~~lI~~iN~~---------~~~VvAVDiPSGl~-------~~av~Ad~TvTf~~~K~~-~~~~G~-v~v~dIG 278 (306)
T 3d3j_A 217 LRDQPWYKAAVAWANQN---------RAPVLSIDPPVHEV-------EQGIDAKWSLALGLPLPL-GEHAGR-IYLCDIG 278 (306)
T ss_dssp GGGCHHHHHHHHHHHHS---------CCCEEEESCCCC------------CCCSEEEEESSCCCC-CGGGCE-EEEECCC
T ss_pred cCcchHHHHHHHHHHhc---------CCCEEEEECCCCCC-------CCceecCEEEEcCcccch-hhhCCE-EEEECCC
Confidence 45 7999999999987 68999999999992 257999999999999975 344555 5566666
Q ss_pred eChhhHhhcCCCCCCCCCCcceeeeCC
Q 036952 80 VPPVIADKYKLRLPPYPGTSMCVRIGK 106 (311)
Q Consensus 80 iP~~~~~~~~~~~p~y~~~~~~v~l~~ 106 (311)
||+.+.+++++.++.|.|.+.++.|..
T Consensus 279 ip~~~~~~~~~~~~~~~g~~~vi~l~~ 305 (306)
T 3d3j_A 279 IPQQVFQEVGINYHSPFGCKFVIPLHS 305 (306)
T ss_dssp CCHHHHHHTTCBCCCTTTTCSEEECBC
T ss_pred CCHHHHhhcCcccCCCCCCceeEeccc
Confidence 899999999999999999999988753
No 20
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.43 E-value=1.8e-13 Score=113.47 Aligned_cols=99 Identities=12% Similarity=0.185 Sum_probs=77.5
Q ss_pred CCCceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeCh
Q 036952 151 EPNAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSD 211 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~ 211 (311)
+...++|||++.+|.| +|+|+..|+ |. ++|++||+|++ |++ ..++|+|.|+|+.+++
T Consensus 17 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~-k~---~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~d 92 (146)
T 2hq7_A 17 SSKIVMVGTNGENGYPNIKAMMRLKHDGLKKFWLSTNTSTR-MV---ERLKKNNKICLYFVDDNKFAGLMLVGTIEILHD 92 (146)
T ss_dssp HCSEEEEEEECGGGCEEEEEEEEEEEETTTEEEEEEECCHH-HH---HHHHHCCEEEEEEECSSSSEEEEEEEEEEEECC
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEcCCCEEEEEecCCCH-HH---HHHhhCCeEEEEEECCCCceEEEEEEEEEEEcC
Confidence 4578999999999998 899999999 99 99999999999 988 6799999999999987
Q ss_pred HH-HHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCCC
Q 036952 212 EE-SEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQTS 285 (311)
Q Consensus 212 ~e-s~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~~ 285 (311)
.+ ..+.|.. +..+|..+ -+.++.|++|+|.|++++||++...
T Consensus 93 ~~~~~~~~~~------------------------------~~~~~~~~--~~~~~~~~~~~i~p~~~~~w~~~~~ 135 (146)
T 2hq7_A 93 RASKEMLWTD------------------------------GCEIYYPL--GIDDPDYTALCFTAEWGNYYRHLKN 135 (146)
T ss_dssp HHHHHHHCCT------------------------------THHHHCTT--GGGCTTEEEEEEEEEEEEEEETTEE
T ss_pred HHHHHHHHHH------------------------------HHHHHCCC--CCCCCCEEEEEEEccEEEEEeCCCC
Confidence 53 3444421 11122111 1234579999999999999998653
No 21
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.42 E-value=1.7e-13 Score=120.42 Aligned_cols=117 Identities=13% Similarity=0.216 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCceEEEeeCCCCc---e-------------EEEeCCCCccccccccccccCCceeE-eee
Q 036952 133 PINQFRKWFDDAIAAGLREPNAMALSTVGKDGK---P-------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY 195 (311)
Q Consensus 133 P~~~f~~Wl~~A~~~~~~~p~a~~LATv~~dG~---P-------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w 195 (311)
..+.+.+-|+ +.+.++|||++.||- | +|+|+..|+ |+ ++|++||+|+| |+|
T Consensus 27 l~e~i~~~L~--------~~~~~~LaTv~~dgp~~rpm~~~~d~d~~g~l~F~T~~~s~-K~---~~l~~np~v~l~~~~ 94 (182)
T 3u35_A 27 LQEKFWKALK--------SDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNA-LI---AMLGQGRRVIGAFSS 94 (182)
T ss_dssp HHHHHHHHHH--------HHCEEEECCTTSGGGCCEEEECBCSSSSCSCEEEEEETTCG-GG---GGCTTCEEEEEEEEC
T ss_pred HHHHHHHHHc--------cCCEEEEEEecCCCCcEEEEEEEEeecCCCEEEEEECCCCH-HH---HHHHHCCcEEEEEEC
Confidence 4455555554 345677888876652 1 999999999 99 99999999999 999
Q ss_pred --cCeeEEEEEEEEEeChHH-HHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEE
Q 036952 196 --QSTTVRVEGSVEKVSDEE-SEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRL 272 (311)
Q Consensus 196 --~~rQVRv~G~a~~l~~~e-s~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l 272 (311)
..++|+|+|+|+.+++.+ .+++|.. .+...|+++ |.++++++++|
T Consensus 95 ~~~~~~V~v~G~a~vv~D~e~~~~lw~~-----------------------------~~~~~~p~g---~~dP~~~vlrv 142 (182)
T 3u35_A 95 KGHDLFASISGSLREDTDPAMVDRLWNP-----------------------------YVAAWYEGG---KTDPNLALLRL 142 (182)
T ss_dssp TTSSEEEEEEEEEEECCCHHHHHHHCCH-----------------------------HHHTTCTTG---GGCTTEEEEEE
T ss_pred CCCCeEEEEEEEEEEEcCHHHHHHHHHH-----------------------------HHHHhccCC---CCCCCEEEEEE
Confidence 789999999999998854 5566621 122334322 44668999999
Q ss_pred EceEEEEEeCCCCCCcceEEEe
Q 036952 273 KPELFEFWQGQTSRLHDRLQYS 294 (311)
Q Consensus 273 ~P~~iEfwq~~~~r~H~R~~y~ 294 (311)
.|+++|||+++.+ +=-|+.+.
T Consensus 143 ~p~~~e~Wd~~~~-~~~~~~~~ 163 (182)
T 3u35_A 143 DADHAQIWLNESS-LLAGIKVL 163 (182)
T ss_dssp EEEEEEEEEEEEE-ECCCEEEE
T ss_pred EeCEEEEEeCCCC-ceeeeeee
Confidence 9999999999876 44566554
No 22
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=99.39 E-value=3.8e-13 Score=124.30 Aligned_cols=86 Identities=16% Similarity=0.216 Sum_probs=68.1
Q ss_pred CC--chHHHHHHHHHhccCCCCCCCCCCcEEEEEcCCCCCCCCCCCCCCccccCeEEeccccccccccCCCCcceeecEE
Q 036952 2 PR--PPFDDLIKRLLCLHGYDQTRQKRPVIVSVDIPSGWHVEEGDIGDEGIKPDMLVSLTAPKLCAKKSSGPHHFLGGRF 79 (311)
Q Consensus 2 lr--~~~~~~i~~in~~~~~~~~~~~~~~vvaiDiPSG~~~d~G~~~~~~i~ad~tit~~~pK~g~~~~~g~~~~~Gg~~ 79 (311)
++ ++++++|+++|++ +.+||||||||||+ +.+|+||+||||++||.| ..+.|. .+++++.
T Consensus 170 l~~~~~~~~lI~~iN~~---------~~~vvAVDiPSGl~-------~~~v~Ad~TvTf~~~K~~-~~~~G~-~~v~diG 231 (259)
T 3d3k_A 170 LRDQPWYKAAVAWANQN---------RAPVLSIDPPVHEV-------EQGIDAKWSLALGLPLPL-GEHAGR-IYLCDIG 231 (259)
T ss_dssp GGGSHHHHHHHHHHHHH---------CSCEEEESCCCC------------CCCSEEEEESSCCCC-CGGGCE-EEEECCC
T ss_pred cCcchHHHHHHHHHHhC---------CCCEEEEECCCCCC-------CCceeccEEEEcCcccch-hhhCCE-EEEECCC
Confidence 55 7899999999987 68999999999992 247999999999999975 344555 5566666
Q ss_pred eChhhHhhcCCCCCCCCCCcceeeeC
Q 036952 80 VPPVIADKYKLRLPPYPGTSMCVRIG 105 (311)
Q Consensus 80 iP~~~~~~~~~~~p~y~~~~~~v~l~ 105 (311)
||+.+.+++++..+.+.|...++.|.
T Consensus 232 ip~~~~~~~~~~~~~~fg~~~vv~l~ 257 (259)
T 3d3k_A 232 IPQQVFQEVGINYHSPFGCKFVIPLH 257 (259)
T ss_dssp CCHHHHHHTTCBCCCSCTTCSEEEEB
T ss_pred CCHHHHhhcCcccCCCCCCceEEEee
Confidence 89999999999888888888887764
No 23
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.29 E-value=6.9e-12 Score=103.27 Aligned_cols=96 Identities=19% Similarity=0.322 Sum_probs=75.8
Q ss_pred CCCceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eeecCeeEEEEEEEEEeChH-
Q 036952 151 EPNAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVSDE- 212 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~~~- 212 (311)
....++|||++.+|.| +|+|+..|+ |. ++|.+||+|++ |++..++|+|.|+|+.++++
T Consensus 19 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~-k~---~~l~~np~v~l~~~~~~~~v~v~G~a~~v~d~~ 94 (141)
T 2fhq_A 19 KCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSL-KT---IDFLSNPKAGLCFQEKGDSVALMGEVEVVTDEK 94 (141)
T ss_dssp TCSEEEEEEECTTSCEEEEEEECCEEETTTEEEEEEETTSH-HH---HHHHHCCEEEEEEEETTEEEEEEEEEEEECCHH
T ss_pred cCCEEEEEEECCCCCEEEEeeEEEEeCCCCeEEEEeCCCCH-HH---HHHHhCCcEEEEEEeCCCEEEEEEEEEEECCHH
Confidence 4678999999999999 899999999 99 99999999999 88866899999999999874
Q ss_pred HHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeC
Q 036952 213 ESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQG 282 (311)
Q Consensus 213 es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~ 282 (311)
+.++.|... +...|+++ +..+.++.|+|.|++++||.+
T Consensus 95 ~~~~~~~~~-----------------------------~~~~~p~~---~~~~~~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 95 LKQELWQDW-----------------------------FIEHFPGG---PTDPGYVLLKFTANHATYWIE 132 (141)
T ss_dssp HHHHSCCGG-----------------------------GGGTCTTC---TTCTTEEEEEEEEEEEEEEET
T ss_pred HHHHHHHHH-----------------------------HHHHcCCC---CCCCCEEEEEEEcCEEEEeeC
Confidence 444555221 00112211 123479999999999999998
No 24
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.28 E-value=4.3e-12 Score=107.62 Aligned_cols=59 Identities=14% Similarity=0.300 Sum_probs=54.3
Q ss_pred CCCCceEEEeeCCCCce---------------EEEeCCCCccccccccccccCCceeE-eee-c--------CeeEEEEE
Q 036952 150 REPNAMALSTVGKDGKP---------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-Q--------STTVRVEG 204 (311)
Q Consensus 150 ~~p~a~~LATv~~dG~P---------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-~--------~rQVRv~G 204 (311)
.+++.++|||+++||.| +|+|+..|+ |+ ++|++||+||| |+| - .++|+|+|
T Consensus 28 ~~~~~~~LaTv~~dG~P~~~~v~~~~~~~g~~~f~t~~~s~-k~---~nl~~np~vsl~v~~~~~~~~~~~~~~~v~i~G 103 (157)
T 1vl7_A 28 QEFQSAIISTISEQGIPNGSYAPFVIDDAKNIYIYVSGLAV-HT---KNIEANPLVNVLFVDDEAKTNQIFARRRLSFDC 103 (157)
T ss_dssp TTCSEEEEEEECTTSCEEEEEEEEEECTTCCEEEEECTTSH-HH---HHHHHCCEEEEEEECCGGGCSSGGGCCEEEEEE
T ss_pred HhCCEEEEEEECCCCCEEEEEEEEEEcCCCCEEEEEeCccH-HH---HHHHhCCcEEEEEEcCccccCCcccCceEEEEE
Confidence 57899999999999999 899999999 99 99999999999 887 2 57899999
Q ss_pred EEEEeChH
Q 036952 205 SVEKVSDE 212 (311)
Q Consensus 205 ~a~~l~~~ 212 (311)
+|+.++++
T Consensus 104 ~a~~v~~~ 111 (157)
T 1vl7_A 104 TATLIERE 111 (157)
T ss_dssp EEEEECTT
T ss_pred EEEEcCCC
Confidence 99999965
No 25
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.23 E-value=1.7e-11 Score=101.53 Aligned_cols=96 Identities=15% Similarity=0.232 Sum_probs=74.5
Q ss_pred CCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee-----cCeeEEEEEEEEEeC
Q 036952 151 EPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-----QSTTVRVEGSVEKVS 210 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-----~~rQVRv~G~a~~l~ 210 (311)
+...++|||++ +|.| +|+|+..|+ |. ++|++||+|+| +.| ..++|+|+|+|+.++
T Consensus 14 ~~~~~~LaT~~-dg~P~~~pv~~~~~~~~l~f~t~~~s~-k~---~~l~~np~v~l~v~~~~d~~~~~~v~v~G~a~~~~ 88 (139)
T 3ec6_A 14 GQRTGVLSTVR-NDKPHSAFMMFFHEDFVLYVATDRQSK-KI---TDIENNPNVHVLLGREGKKLDEDYIEVEGLASIEE 88 (139)
T ss_dssp SCCEEEEEEEE-TTEEEEEEEECEEETTEEEEEEETTCH-HH---HHHHHCCEEEEEECC---CTTCCEEEEEEEEEEEC
T ss_pred cCCEEEEEEec-CCCEEEEEEEEEEeCCEEEEEECCCCH-HH---HHHHhCCcEEEEEEecCCCCCccEEEEEEEEEEEc
Confidence 57789999999 9999 899999999 99 99999999999 743 479999999999998
Q ss_pred h-HHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCC
Q 036952 211 D-EESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQT 284 (311)
Q Consensus 211 ~-~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~ 284 (311)
+ ++.+++|.. .+.. -|. + +..+..+.++|.|++++||.+..
T Consensus 89 d~~~~~~~~~~-----~~~~------------------------~~~-~---~~~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 89 DSTLKNKFWNN-----SLKR------------------------WLL-R---PEDPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp CHHHHHHHCCG-----GGGG------------------------TCS-S---TTCTTEEEEEEEEEEEEEEC---
T ss_pred CHHHHHHHHHH-----HHHH------------------------HhC-C---CCCCCEEEEEEEeeEEEEEcCCC
Confidence 6 566777741 1111 121 1 12346899999999999999864
No 26
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.23 E-value=5.2e-11 Score=96.83 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=67.9
Q ss_pred CCCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee---cCeeEEEEEEEEEeCh
Q 036952 150 REPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY---QSTTVRVEGSVEKVSD 211 (311)
Q Consensus 150 ~~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w---~~rQVRv~G~a~~l~~ 211 (311)
.+...+.|||++ +|.| +|+|+..|+ |. ++|++||+||+ +.+ ..++|+|.|+|+.+.+
T Consensus 15 ~~~~~~~LaT~~-~g~P~~~pv~~~~~~~~l~f~t~~~s~-k~---~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~d 89 (128)
T 3db0_A 15 EQHQVGVLTSVQ-GDFPHARYMTFLHDGLTLYTPSGKELP-KT---EEVRRNPHVCVLIGYDSPGSAFLEINGLASLEED 89 (128)
T ss_dssp HTCCEEEEEEEE-TTEEEEEEEECEEETTEEEEEC----C-TT---CCCCCCCEEEEEECCCSTTCCEEEEEEEEEECCC
T ss_pred hhCCEEEEEEec-CCCEEEEEEEEEecCCEEEEEECCCCH-HH---HHHHhCCceEEEEEEcCCCCcEEEEEEEEEEEcC
Confidence 367889999997 8999 899999999 99 99999999999 655 7899999999999975
Q ss_pred -HHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEe
Q 036952 212 -EESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQ 281 (311)
Q Consensus 212 -~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq 281 (311)
++.+++|+. +.++|.. -+..+..+.++|.|++++||.
T Consensus 90 ~~~~~~~~~~------------------------------~~~~~~~---~~~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 90 ESIKERIWEN------------------------------ISKDWFQ---GEDSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp HHHHHHHHHH------------------------------HCSSCCC---------CCEEEEEEEEEEEEC
T ss_pred HHHHHHHHHH------------------------------HHHHhCC---CCCCCCEEEEEEEeEEEEEec
Confidence 555666632 1112211 112246899999999999984
No 27
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.13 E-value=3.2e-10 Score=93.50 Aligned_cols=100 Identities=15% Similarity=0.037 Sum_probs=77.0
Q ss_pred CCCCCceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eeecCeeEEEEEEEEEeCh
Q 036952 149 LREPNAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVSD 211 (311)
Q Consensus 149 ~~~p~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~~ 211 (311)
+.+...+.|||++.||.| +|+|+..|+ |. ++|.+||+|++ +++-.+.|+|+|+|+.+++
T Consensus 18 L~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~l~f~t~~~s~-k~---~~l~~np~V~l~~~~~~~~v~v~G~a~~~~d 93 (137)
T 2asf_A 18 LSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQ-KA---VNADRSGLAVLSQVDGARWLSLEGRAAVNSD 93 (137)
T ss_dssp TTSSCCEEEEEECTTSCEEEEEECCEEETTTTEEEEEEETTCH-HH---HHHHHHCEEEEEEEETTEEEEEEEEEEEECC
T ss_pred HhCCCeEEEEEECCCCCEEEEEEEEEEECCCCEEEEEeCCCCH-HH---HHHhhCCeEEEEEECCCCEEEEEEEEEEecC
Confidence 356888999999999999 799999999 99 99999999999 8776689999999999985
Q ss_pred HHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCC
Q 036952 212 EESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQT 284 (311)
Q Consensus 212 ~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~ 284 (311)
.+. ..+....+.++|+. ..+ .+....|+|.|+++..|..-.
T Consensus 94 ~~~-----------------------------~~~~~~~~~~~~~~--~~~-~~~~~viri~~~~v~g~~~~~ 134 (137)
T 2asf_A 94 IDA-----------------------------VRDAELRYAQRYRT--PRP-NPRRVVIEVQIERVLGSADLL 134 (137)
T ss_dssp HHH-----------------------------HHHHHHHHHHHSCC--CCC-CTTEEEEEEEEEEEEECTTTC
T ss_pred HHH-----------------------------HHHHHHHHHHhcCc--ccC-CCCEEEEEEEEEEEEEecccc
Confidence 321 11222334456642 122 345799999999999886543
No 28
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.06 E-value=3.3e-10 Score=92.64 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=73.1
Q ss_pred CCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee---cCeeEEEEEEEEEeChH
Q 036952 151 EPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY---QSTTVRVEGSVEKVSDE 212 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w---~~rQVRv~G~a~~l~~~ 212 (311)
+...+.|||++.||.| +|+|+..|+ |. ++|.+||+||+ |.+ ..++|+|+|+|+.++++
T Consensus 14 ~~~~~~LaT~~~dG~P~~~pv~~~~d~~~l~f~t~~~s~-k~---~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~~~ 89 (131)
T 3f7e_A 14 RPLYGHLATVRPDGTPQVNAMWFAWDGEVLRFTHTTKRQ-KY---RNIKANPAVAMSVIDPDNPYRYLEVRGLVEDIVPD 89 (131)
T ss_dssp SCCCEEEEEECTTSCEEEEEECCEECSSCEEEEEETTSH-HH---HHHHHCCEEEEEEECSSCTTCEEEEEEEEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEEEEEEECCEEEEEECCCCH-HH---HHHhhCCcEEEEEEcCCCCeeEEEEEEEEEEeccC
Confidence 5778999999999999 899999999 99 99999999999 887 36899999999998853
Q ss_pred HHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCC-C-CCCCCCeeEEEEEceEEEEEe
Q 036952 213 ESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWS-L-IPKPEFWGGYRLKPELFEFWQ 281 (311)
Q Consensus 213 es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~-~-~p~p~~w~gy~l~P~~iEfwq 281 (311)
+.. +.+.++.++|.... + ...-+....++|.|+++--|.
T Consensus 90 ~~~------------------------------~~~~~l~~ky~~~~~~~~~~~~~~~v~ri~~~~~~gk~ 130 (131)
T 3f7e_A 90 PTG------------------------------AFYLKLNDRYDGPLTEPPADKADRVIIVVRPTAFSKQV 130 (131)
T ss_dssp TTC------------------------------HHHHHHHHHTTCSCCSCCTTGGGEEEEEEEEEEEECC-
T ss_pred ccH------------------------------HHHHHHHHHhCCcccCCCCCCCCEEEEEEEeEEEEeec
Confidence 211 12234555665321 1 112245689999999987664
No 29
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=98.92 E-value=6.7e-09 Score=87.28 Aligned_cols=106 Identities=20% Similarity=0.183 Sum_probs=72.9
Q ss_pred CCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee-----cCeeEEEEEEEEEeCh
Q 036952 152 PNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-----QSTTVRVEGSVEKVSD 211 (311)
Q Consensus 152 p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-----~~rQVRv~G~a~~l~~ 211 (311)
...++|||++.+|.| +|+|+..|+ |. ++|.+||+|++ |+. ..+.|+|.|+|+.+++
T Consensus 22 ~~~~~LaT~~~~G~P~~~pv~~~~~~~~l~~~t~~~~~-k~---~~l~~np~v~l~~~~~~~~~~~~~v~~~G~a~~v~d 97 (162)
T 1rfe_A 22 SRTGTLATIGPDGQPHLTAMWYAVIDGEIWLETKAKSQ-KA---VNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEE 97 (162)
T ss_dssp CCCEEEEEECTTSCEEEEEECCEEETTEEEEEEETTSH-HH---HHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEECC
T ss_pred CcEEEEEEECCCCCEEEEEEEEEEECCEEEEEecCccH-HH---HHHhhCCeEEEEEEcCCCcccccEEEEEEEEEEeCC
Confidence 457999999999999 899999999 99 99999999999 865 2478999999999987
Q ss_pred HH-HHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCC
Q 036952 212 EE-SEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQT 284 (311)
Q Consensus 212 ~e-s~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~ 284 (311)
++ ..+.|...- ..|.... .... ..+..+ ..+...+|+|.|+++++|..+.
T Consensus 98 ~~~~~~~~~~l~-----~~~~~~~---~~~~-------~~~~~~--------~~~~~~v~~i~~~~~~~~~~~~ 148 (162)
T 1rfe_A 98 PEALHRVGVSVW-----ERYTGPY---TDEC-------KPMVDQ--------MMNKRVGVRIVARRTRSWDHRK 148 (162)
T ss_dssp HHHHHHHHHHHH-----HHHTCCC---CGGG-------HHHHHH--------HTTTEEEEEEEEEEEEEEEGGG
T ss_pred hHHHHHHHHHHH-----HHhcCcc---cchh-------HHHHHh--------ccCceEEEEEEEEEEEEecccc
Confidence 43 333342110 0011000 0000 011111 1236899999999999997654
No 30
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=98.84 E-value=4.3e-09 Score=86.94 Aligned_cols=58 Identities=21% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCCceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeCh
Q 036952 151 EPNAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSD 211 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~ 211 (311)
....++|||++.+|.| +|+|+..|+ |. ++|.+||+|++ |.. ..++|+|.|+|+.+++
T Consensus 16 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~~~t~~~~~-k~---~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d 91 (147)
T 2aq6_A 16 GNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRA-KT---RNLRRDPRASILVDADDGWSYAVAEGTAQLTPP 91 (147)
T ss_dssp TCSEEEEEEECTTSCEEEEEEECEEETTTTEEEEEEETTSH-HH---HHHHHCCEEEEEEECTTSSCEEEEEEECEECCC
T ss_pred cCCeEEEEEECCCCCEEEEEEEEEEcCCCCEEEEEecCCCH-HH---HHHhhCCcEEEEEEcCCCcEEEEEEEEEEEcCC
Confidence 5778999999999998 688999999 99 99999999999 876 4578999999999986
Q ss_pred H
Q 036952 212 E 212 (311)
Q Consensus 212 ~ 212 (311)
.
T Consensus 92 ~ 92 (147)
T 2aq6_A 92 A 92 (147)
T ss_dssp C
T ss_pred C
Confidence 3
No 31
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=98.80 E-value=7.5e-09 Score=86.33 Aligned_cols=57 Identities=25% Similarity=0.370 Sum_probs=52.1
Q ss_pred CceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eee--cCeeEEEEEEEEEeChHH
Q 036952 153 NAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--QSTTVRVEGSVEKVSDEE 213 (311)
Q Consensus 153 ~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~~rQVRv~G~a~~l~~~e 213 (311)
..++|||+|+||.| +|+|...++ |. ++|.+||+|+| |++ ..+++||.|+|+.+++.+
T Consensus 39 ~~~~LATv~~dG~P~~~p~~f~~~~d~~~l~f~~~~~~~-k~---~nL~~np~V~l~~~~~~~~~~v~i~G~a~~v~d~~ 114 (140)
T 2htd_A 39 NLVYLATVDADGNPQVGPKGSMTVLDPSHLQYLEKTKGE-AY---ENIKRGSKVALVAADVPSHTAVRVLATAEVHEDDD 114 (140)
T ss_dssp SCEEEEEECTTCCEEEEEETTCEEEETTEEEEEESSCCH-HH---HHHHTTCCEEEEEEETTTTEEEEEEEEEEEESSSH
T ss_pred CCEEEEEECCCCCEEEecceeEEecCCCEEEEeccCCch-HH---HHhhcCCeEEEEEEecCCCCEEEEEEEEEEecChH
Confidence 37899999999998 888999999 99 99999999999 998 679999999999998643
No 32
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=98.67 E-value=2.3e-08 Score=84.28 Aligned_cols=57 Identities=23% Similarity=0.352 Sum_probs=50.0
Q ss_pred CCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee---------cCeeEEEEEEE
Q 036952 151 EPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY---------QSTTVRVEGSV 206 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w---------~~rQVRv~G~a 206 (311)
+...++|||+++||.| +|+|...|+ |. ++|.+||+||| +.- ...-+.+.|+|
T Consensus 13 ~~~~~~LaT~~~~G~P~~s~v~~~~~~~~~~~~~s~~~~-~~---~nl~~~prvsl~v~~~~~~~~~~~~~~rltl~G~a 88 (148)
T 3tgv_A 13 ERKTLQLATVDAQGRPNVSYAPFVQNQEGYFVLISHIAR-HA---RNLEVNPQVSIMMIEDETEAKQLFARKRLTFDAVA 88 (148)
T ss_dssp HCCEEEEEEECTTCCEEEEEEEEEEETTEEEEEEETTSH-HH---HHHHHSCEEEEEEECCGGGCSCGGGCCEEEEEEEE
T ss_pred hCCEEEEEEECCCCCEEEEEEEEEEECCEEEEEECCccH-HH---HHHHhCCCeEEEEecCcccccCcccceEEEEeeeE
Confidence 5678999999999999 889999999 99 99999999999 643 23459999999
Q ss_pred EEeCh
Q 036952 207 EKVSD 211 (311)
Q Consensus 207 ~~l~~ 211 (311)
+.+++
T Consensus 89 ~~v~~ 93 (148)
T 3tgv_A 89 SMVER 93 (148)
T ss_dssp EEECT
T ss_pred EEcCC
Confidence 99985
No 33
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=98.56 E-value=3.2e-07 Score=82.94 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=73.7
Q ss_pred CCCceEEEeeCC--CCce---------------EEEeCCCCccccccccccccCCceeE-eee-c------CeeEEEEEE
Q 036952 151 EPNAMALSTVGK--DGKP---------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-Q------STTVRVEGS 205 (311)
Q Consensus 151 ~p~a~~LATv~~--dG~P---------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-~------~rQVRv~G~ 205 (311)
..+..+|||+++ ||.| +|+|...|+ |. ++|..||+||| +.- . ..-|.|.|+
T Consensus 18 ~~~~~~LaT~~~~~dG~P~~s~v~~~~d~~g~~~f~~s~~s~-k~---~nl~~nprvsl~v~~~~~~~~~~~~~v~l~G~ 93 (247)
T 2arz_A 18 KEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQ-HT---HNLQADPRCSMLVGERGAEDIQAVGRLTLLAE 93 (247)
T ss_dssp HCSEEEEEEECSSSTTCEEEEEEECEECTTSCEEEEEETTSH-HH---HHHHHCCEEEEEEECTTCSSTTSSCEEEEEEE
T ss_pred hCCEEEEEEcCCCCCCcceEEEEEEEECCCCCEEEEEeChhH-HH---HHHHhCCCeEEEEecCCCCChhhCceEEEEEE
Confidence 356789999998 8999 899999999 99 99999999999 764 2 246999999
Q ss_pred EEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCCC
Q 036952 206 VEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQT 284 (311)
Q Consensus 206 a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~~ 284 (311)
|+.+++++ .+.+ ...+..+|++.......+.+..|+|.|+++.||.|-.
T Consensus 94 a~~v~d~e-~~~~-----------------------------~~~~~~~~P~~~~~~~~~~~~l~rl~~~~~~~~~gfG 142 (247)
T 2arz_A 94 ARQLAEEE-VAAA-----------------------------AERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFG 142 (247)
T ss_dssp EEECCHHH-HHHH-----------------------------HHHHHHHCGGGTTCBTTBBEEEEEEEEEEEEEECTTC
T ss_pred EEECCcHH-HHHH-----------------------------HHHHHHHCcChhhcccccCcEEEEEEEEEEEEEcCCC
Confidence 99999643 2222 1123334443222223356899999999999997643
No 34
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=98.44 E-value=3.8e-07 Score=83.62 Aligned_cols=100 Identities=20% Similarity=0.192 Sum_probs=73.2
Q ss_pred CCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCC-ceeE-eee---------cCeeEEEEEE
Q 036952 151 EPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAV-ETSI-FTY---------QSTTVRVEGS 205 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP-~aal-f~w---------~~rQVRv~G~ 205 (311)
....++|||+++||.| +|++..-++ |. ++|++|| +||| +.- ..+-|.|.|+
T Consensus 97 ~~~~~~LAT~~~dG~P~~s~v~~~~~~g~~~~~~s~~a~-h~---~NL~~nP~rvSl~v~e~e~~~~~~~~~~rltl~G~ 172 (251)
T 3swj_A 97 SFNSVALATLNANGEVVCSYAPFVSTQWGNYIYISEVSE-HF---NNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVN 172 (251)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEEEEETTEEEEEEETTSH-HH---HHHHHSTTCEEEEEECCTTTSSCTTCCCEEEEEEE
T ss_pred hCCEEEEEEECCCCCEEEEEEEEEEECCEEEEEEeCchH-HH---HHHHhCCCeEEEEEEcCcccccCccccceEEEEEE
Confidence 6778999999999999 788888899 99 9999999 9999 753 3467999999
Q ss_pred EEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCC---CCCCCCCCeeEEEEEceEEEEEeC
Q 036952 206 VEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDW---SLIPKPEFWGGYRLKPELFEFWQG 282 (311)
Q Consensus 206 a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~---~~~p~p~~w~gy~l~P~~iEfwq~ 282 (311)
|+.+++++ +.++..+.+..+|+.. +....-+.|.-|+|.|..+-|-.|
T Consensus 173 a~~v~~~~-----------------------------e~~~~~~~~~~k~p~a~~~~~~~~~~Df~l~rl~p~~~r~v~G 223 (251)
T 3swj_A 173 ASFLERGE-----------------------------RFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKG 223 (251)
T ss_dssp EEECCSSH-----------------------------HHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEE
T ss_pred EEEecChh-----------------------------HHHHHHHHHHHHCCCchhhhhcCcccCEEEEEEEeeEEEEECC
Confidence 99998631 1112223344455431 011223478999999999988655
Q ss_pred C
Q 036952 283 Q 283 (311)
Q Consensus 283 ~ 283 (311)
-
T Consensus 224 F 224 (251)
T 3swj_A 224 F 224 (251)
T ss_dssp T
T ss_pred c
Confidence 3
No 35
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=98.38 E-value=4.3e-07 Score=76.84 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=72.5
Q ss_pred CCCceEEEeeCCCCce-----------------EEEeCCCCccccccccccccCCceeE-eee--c---CeeEEEE-EEE
Q 036952 151 EPNAMALSTVGKDGKP-----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--Q---STTVRVE-GSV 206 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P-----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--~---~rQVRv~-G~a 206 (311)
+-..++|||++ +|.| +|.|+.+|+ |. +||.+||+|++ .+- . ..|||++ |.|
T Consensus 13 ~~~~~~LAT~~-~g~P~vR~v~f~~~~~~~~~LYF~T~~~k~-k~---~ql~~Np~V~i~~~~~d~~~~~~~IRi~~G~a 87 (145)
T 3ba3_A 13 STNKIALSTAV-NNEADVKIVNFVWYEAQPDTLYFSSVKTSP-AL---KVYDQNPDIAFITIPNDGTAGNPYLRAQHVKL 87 (145)
T ss_dssp TEEEEEEEEEE-TTEEEEEEEECEECTTSTTEEEEEEETTCT-HH---HHHTTCCEEEEEEEECTTCTTCCEEEEEEEEE
T ss_pred hCCcEEEEECC-CCCEEEEEEEEEEEecCCCEEEEEECCCCH-HH---HHHHhCCCEEEEEECCCCCccceEEEEEeEEE
Confidence 34568999965 8999 899999999 99 99999999999 665 3 4999999 999
Q ss_pred EEeCh---HHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeCC
Q 036952 207 EKVSD---EESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQGQ 283 (311)
Q Consensus 207 ~~l~~---~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~~ 283 (311)
+..++ +..+..|..-| .+.+.|.. +.+ .+..|.|.|.++.+.-+.
T Consensus 88 ~~~~~~~~~~k~~~~e~~P---------------------------~~k~~y~~----~~~-~l~vf~i~~~~a~~~~~~ 135 (145)
T 3ba3_A 88 QRSTKTMTDLLPQYLETVP---------------------------NYQQVWDA----IGS-TLVVFELKLTDLFVDAGV 135 (145)
T ss_dssp EECSCCHHHHHHHHHHHST---------------------------THHHHHHH----HGG-GEEEEEEECSEEEEECCT
T ss_pred EEcCCchHHHHHHHHHhCh---------------------------hhhhcccC----CCC-cEEEEEEECCEEEEECCC
Confidence 99873 45555665433 12233321 122 689999999999997643
No 36
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=98.29 E-value=4.6e-07 Score=76.78 Aligned_cols=57 Identities=11% Similarity=0.003 Sum_probs=51.1
Q ss_pred CCCceEEEeeCCC-Cce----------------EEEeCCCCccccccccccccCCceeE-eeecCeeEEEEEEEEEeCh
Q 036952 151 EPNAMALSTVGKD-GKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVSD 211 (311)
Q Consensus 151 ~p~a~~LATv~~d-G~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~~ 211 (311)
....+.|||++.| |.| +|+|+..++ |. ++|.+||+|++ |.--..-++|.|+|+.+.+
T Consensus 20 ~~~~~~LATv~~d~G~P~~sp~~~~~~~d~~~l~f~~~~~~~-k~---~nl~~np~Vsl~v~~~~~~~~i~G~A~~v~d 94 (151)
T 2q9k_A 20 DLPLVFLITHDQSKSWPITHAISWVYAKDETTIRFAIEADSL-LV---KTLADHPVFTLIFFADQSTYSLTCTDVAAWE 94 (151)
T ss_dssp SCCCEEEEECCTTSSSCEEEEECCEEEEETTEEEEEEETTCT-HH---HHHHHSCCEEEEEEETTEEEEEEEEEEEEEC
T ss_pred cCCEEEEEEEcCCCCcEeEeeeEEEEEeCCCEEEEEECCCcH-HH---HHHHhCCcEEEEEECCCCEEEEEEEEEEEeC
Confidence 5577899999999 999 899999999 99 99999999999 6555567999999999986
No 37
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=98.28 E-value=4e-06 Score=72.34 Aligned_cols=57 Identities=25% Similarity=0.365 Sum_probs=49.7
Q ss_pred CCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee-----------------cCee
Q 036952 152 PNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-----------------QSTT 199 (311)
Q Consensus 152 p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-----------------~~rQ 199 (311)
...++|||++++|.| +|+|...++ |. ++|.+||+|++ |.- ..+.
T Consensus 38 ~~~~~Lat~~~dg~P~v~Pv~f~~~~~~lyfhta~~~~-k~---~~l~~np~V~~~v~~~~~~is~~~~~~~~~t~~y~s 113 (178)
T 2fg9_A 38 ADACFVGITDLEGNPYVVPMNFGYENDTLYLHSGPEGG-KI---EMLQRNNNVCITFSLGHKLVYQHKQVACSYSMRSES 113 (178)
T ss_dssp CSCEEEEEECTTSCEEEEEECCEEETTEEEEEECSCSH-HH---HHHHHCCEEEEEEECCCEEEEEC----CEEEEEEEE
T ss_pred CCEEEEEEECCCCcEEEEEEEEEEECCEEEEEcCCcch-HH---HHhhcCCcEEEEEEeCCceeeccCCCCCCCcccEEE
Confidence 456899999999999 889999999 99 99999999999 754 2477
Q ss_pred EEEEEEEEEeChH
Q 036952 200 VRVEGSVEKVSDE 212 (311)
Q Consensus 200 VRv~G~a~~l~~~ 212 (311)
|.|.|+|+.++++
T Consensus 114 V~v~G~a~~v~d~ 126 (178)
T 2fg9_A 114 AMCRGKVEFIEDM 126 (178)
T ss_dssp EEEEEECEEECSH
T ss_pred EEEEEEEEEECCH
Confidence 8999999999864
No 38
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=98.10 E-value=2.4e-05 Score=67.57 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=48.2
Q ss_pred CCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee---------------cCeeEE
Q 036952 152 PNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY---------------QSTTVR 201 (311)
Q Consensus 152 p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w---------------~~rQVR 201 (311)
...++|||++ +|.| +|+|...++ |. ++|.+||+|++ |.- ..+.|.
T Consensus 25 ~~~~~Lat~~-~g~P~~~Pv~f~~~~~~ly~hta~~~~-k~---~~l~~np~V~~~v~~~~~~~~~~v~~~~t~~y~sV~ 99 (185)
T 2hti_A 25 ARTGFLGLST-NDQPYVIPLNFVWHNHAIYFHGASEGR-KI---KMIEANPEVCFTICEDLGTIVSPVPAHTDTAYMSVI 99 (185)
T ss_dssp CCCEEEEEEE-TTEEEEEEECCEEETTEEEEEEESSSH-HH---HHHHHCCEEEEEEEECC-------------CEEEEE
T ss_pred CCEEEEEEee-CCEEEEEEEEEEEECCEEEEEeCCcCH-HH---HHhhcCCeEEEEEEeccccccccccccCcceEEEEE
Confidence 4568999999 6888 889999999 99 99999999999 643 246799
Q ss_pred EEEEEEEeChH
Q 036952 202 VEGSVEKVSDE 212 (311)
Q Consensus 202 v~G~a~~l~~~ 212 (311)
|.|+|+.++++
T Consensus 100 v~G~a~~v~d~ 110 (185)
T 2hti_A 100 IFGTIEPVSAI 110 (185)
T ss_dssp EEEEEEECCCH
T ss_pred EEEEEEEECCH
Confidence 99999999874
No 39
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=98.10 E-value=1.5e-05 Score=66.26 Aligned_cols=90 Identities=11% Similarity=0.038 Sum_probs=65.0
Q ss_pred CCCceEEEeeCCCCce------------------EEEeCCCCccccccccccccCCceeE-eee----cCeeEEEEEEEE
Q 036952 151 EPNAMALSTVGKDGKP------------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY----QSTTVRVEGSVE 207 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P------------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w----~~rQVRv~G~a~ 207 (311)
+.....|||++ +|.| +|+|. .++ |. ++|..||+||+ +.. ..+.|+|.|+|+
T Consensus 26 ~~~~~~Lat~~-dg~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~-K~---~~l~~np~V~~~v~~~~~~~~~sV~v~G~a~ 99 (148)
T 3cp3_A 26 SESVGRLVVHR-KDDLDIFPVNFVLDYSAEQPRVYFRTA-EGT-KL---FSVNLNSDVLFEVDRFDDAEGWSVVLKGNAY 99 (148)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEEEEEECSSSSCEEEEEEC---C-CS---SCTTSCSEEEEEEEECC--CEEEEEEEEEEE
T ss_pred cCCEEEEEEEe-CCEEEEEEEEEEEEecCCCCEEEEEcC-CCc-hH---HHHhcCCcEEEEEEECCCCCCeEEEEEEEEE
Confidence 56678999996 8888 77888 999 99 99999999999 655 356899999999
Q ss_pred EeChHH-HHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeC
Q 036952 208 KVSDEE-SEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQG 282 (311)
Q Consensus 208 ~l~~~e-s~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~ 282 (311)
.+++.+ -.+.+... ..+|. | .+...+|+|.|+++..+..
T Consensus 100 ~v~d~~e~~~~l~~~------------------------------~~~~~-----~-~~~~~viri~~~~~tgk~~ 139 (148)
T 3cp3_A 100 VVRDTEEARHADTLG------------------------------LKPWL-----P-TLKYNFVRIDVREVSGRAF 139 (148)
T ss_dssp ECCCHHHHHHHTTSC------------------------------CCCCC-----T-TCCCEEEEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHhcc------------------------------ccccC-----C-CCceEEEEEEeEEEEEEEc
Confidence 998753 44444220 01111 1 1356899999999987654
No 40
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=98.09 E-value=1.5e-05 Score=69.01 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=65.9
Q ss_pred CCceEEEeeCC----CCce-------------------EEEeCCCCccccccccccccCCceeE-eee------------
Q 036952 152 PNAMALSTVGK----DGKP-------------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY------------ 195 (311)
Q Consensus 152 p~a~~LATv~~----dG~P-------------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w------------ 195 (311)
.+..+|||++. +|.| +|++...++ |. ++|.+||+||| +.+
T Consensus 30 ~~~g~LaTi~~~~~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~-~~---~nl~~nprvSl~v~~~~~~~~~~~~~d 105 (184)
T 1xhn_A 30 SDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQL-SV---SNLQENPYATLTMTLAQTNFCKKHGFD 105 (184)
T ss_dssp CSEEEEEEECCCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSH-HH---HHHHHCCEEEEEEEGGGTTHHHHHTCC
T ss_pred CCEEEEEecccCCCCCCcceEEEEEEEeccCcCCCCCEEEEEeCccH-hH---HHHhhCCCEEEEEecCCCccccccCCC
Confidence 45577888876 6666 677777788 99 99999999999 774
Q ss_pred --c--CeeEEEEEEEEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEE
Q 036952 196 --Q--STTVRVEGSVEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYR 271 (311)
Q Consensus 196 --~--~rQVRv~G~a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~ 271 (311)
. ..-|.+.|+|+.+++++... ..+.+..++++.......+.|..|+
T Consensus 106 p~~~~~~rvtl~G~a~~v~d~e~~~------------------------------~~~~~~~~hP~~~~~~~~~~~~~~~ 155 (184)
T 1xhn_A 106 PQSPLCVHIMLSGTVTKVNETEMDI------------------------------AKHSLFIRHPEMKTWPSSHNWFFAK 155 (184)
T ss_dssp TTSTTSCEEEEEEEEEECCGGGHHH------------------------------HHHHHHHHCGGGGGSCGGGCCEEEE
T ss_pred CccccCceEEEEEEEEECChHHHHH------------------------------HHHHHHHHCcChhHcccCCCEEEEE
Confidence 1 55699999999999643210 1111222333211122345789999
Q ss_pred EEceEEEEEeC
Q 036952 272 LKPELFEFWQG 282 (311)
Q Consensus 272 l~P~~iEfwq~ 282 (311)
|.|+++-|..|
T Consensus 156 l~i~~i~~v~g 166 (184)
T 1xhn_A 156 LNITNIWVLDY 166 (184)
T ss_dssp EEEEEEEEECS
T ss_pred EEEeEEEEEcc
Confidence 99999987554
No 41
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=98.04 E-value=1.3e-05 Score=73.39 Aligned_cols=98 Identities=16% Similarity=0.260 Sum_probs=69.7
Q ss_pred CCCceEEEeeC-CCCce---------------EEEeCCCCccccccccccccCCceeE-eee-------cCeeEEEEEEE
Q 036952 151 EPNAMALSTVG-KDGKP---------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-------QSTTVRVEGSV 206 (311)
Q Consensus 151 ~p~a~~LATv~-~dG~P---------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-------~~rQVRv~G~a 206 (311)
..+..+|||++ .||.| +|++...++ |. ++|..||+||| +.. ....|.|.|++
T Consensus 38 ~~~~g~LaTv~~~dG~P~~s~v~y~~d~~g~~~~~~s~~~~-h~---~NL~~dprvSl~V~~~~~~d~~~~~rvtl~G~a 113 (258)
T 3dnh_A 38 TSRTAALATLDPVSGYPYTTATNIGIEPDGTPFFFAAGLTL-HA---RNMETDARISVTLAPFGKGDALTLPRLTLVGRA 113 (258)
T ss_dssp HCCEEEEEEECTTTCCEEEEEEECEECTTSCEEEEEETTSH-HH---HHHHHCCEEEEEECCGGGSCGGGSCEEEEEEEE
T ss_pred hCCEEEEEeccCCCCceEEEEEEEEECCCCCEEEEEeCCcH-HH---HHHhhCCCEEEEEecCCCCChhhCCeEEEEEEE
Confidence 46779999999 89999 788888899 99 99999999999 765 34679999999
Q ss_pred EEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCCCCCCCCCCeeEEEEEceEEEEEeC
Q 036952 207 EKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDWSLIPKPEFWGGYRLKPELFEFWQG 282 (311)
Q Consensus 207 ~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~~p~p~~w~gy~l~P~~iEfwq~ 282 (311)
+.+.+++.+ .+. +.+..++++......-+.|.-|+|.|+++-|-.|
T Consensus 114 ~~v~~~e~~---------------------------~l~---~~y~~rhP~a~~~~~~~df~l~rl~~~~v~~v~G 159 (258)
T 3dnh_A 114 DRIGPDEVP---------------------------LAI---ARYIARYPKAKLYLSLPDTRLYRLRTEGVQINGG 159 (258)
T ss_dssp EECCGGGHH---------------------------HHH---HHHHHHCTTHHHHTSSTTEEEEEEEEEEEEEEC-
T ss_pred EEcCchHHH---------------------------HHH---HHHHHHCcChHHcccCCCeEEEEEEEeEEEEEcc
Confidence 999975411 111 1122233211111123468999999999988544
No 42
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=98.00 E-value=1.5e-05 Score=70.52 Aligned_cols=56 Identities=13% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee---c------------CeeEE
Q 036952 152 PNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY---Q------------STTVR 201 (311)
Q Consensus 152 p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w---~------------~rQVR 201 (311)
...++|||++ +|.| +|+|...++ |. ++|..||+|++ |.- . .+-|.
T Consensus 32 ~~~~~Lat~~-dg~P~v~Pv~f~~~~~~lyfhta~~~~-k~---~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~y~sV~ 106 (209)
T 2fur_A 32 NFTCTVSFID-GGIPYAIPMMLASEGKTIYLHGSMKSR-IY---GILKTGQLIAISLLEINGIVLAKEIKNNSINYVSAL 106 (209)
T ss_dssp CSEEEEEEEE-TTEEEEEEEECEEETTEEEEEEETTSH-HH---HHHHTTCCEEEEEEEEEEEEECSBGGGCEEEEEEEE
T ss_pred CCEEEEEEcc-CCEEEEEEEEEEEECCEEEEEeCCcCH-HH---HHhhcCCeEEEEEEcCCeeecCCCCCCCccEEEEEE
Confidence 5678999999 9999 889999999 99 99999999999 755 1 47899
Q ss_pred EEEEEEEeChH
Q 036952 202 VEGSVEKVSDE 212 (311)
Q Consensus 202 v~G~a~~l~~~ 212 (311)
|.|+|+.++++
T Consensus 107 v~G~a~~v~d~ 117 (209)
T 2fur_A 107 IFGRPYEIDDT 117 (209)
T ss_dssp EEECCEECCCH
T ss_pred EEEEEEEECCH
Confidence 99999999864
No 43
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=97.99 E-value=2.2e-05 Score=65.15 Aligned_cols=56 Identities=25% Similarity=0.436 Sum_probs=47.8
Q ss_pred CCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee-----cCeeEEEEEEEEEeC
Q 036952 151 EPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-----QSTTVRVEGSVEKVS 210 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-----~~rQVRv~G~a~~l~ 210 (311)
+...++|||++ +|.| +|+| ..++ |. ++|.+||+|++ |.- ..+.|.|.|+|+.++
T Consensus 18 ~~~~~~Lat~~-~g~P~~~pv~~~~~~~~l~~~t-~~~~-k~---~~l~~~p~V~~~v~~~~~~~~y~sV~v~G~a~~v~ 91 (149)
T 2hq9_A 18 ANRVGRLACAK-DGQPYVVPLYYAYSDAHLYAFS-MPGK-KI---EWMRANPRVSVQVDEHGQGRGWKSVVVDGRYEELP 91 (149)
T ss_dssp HCCEEEEEEEE-TTEEEEEEEECEEETTEEEEEE-CSSH-HH---HHHHHCCEEEEEEEEECSTTCEEEEEEEEEEEECC
T ss_pred hCCEEEEEEcc-CCeEEEEEEEEEEECCEEEEEe-CccH-HH---HHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEEc
Confidence 45678999999 9999 7888 6788 99 99999999999 764 346799999999998
Q ss_pred hH
Q 036952 211 DE 212 (311)
Q Consensus 211 ~~ 212 (311)
++
T Consensus 92 d~ 93 (149)
T 2hq9_A 92 DL 93 (149)
T ss_dssp SC
T ss_pred Cc
Confidence 64
No 44
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=97.98 E-value=2.1e-05 Score=65.88 Aligned_cols=55 Identities=25% Similarity=0.376 Sum_probs=46.9
Q ss_pred CCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee-----cCeeEEEEEEEEEeCh
Q 036952 152 PNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-----QSTTVRVEGSVEKVSD 211 (311)
Q Consensus 152 p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-----~~rQVRv~G~a~~l~~ 211 (311)
.....|||++ ||.| +|+| ..++ |. ++|..||+||+ +.- ..+.|.|.|+|+.+++
T Consensus 22 ~~~~~Lat~~-dg~P~~~Pv~~~~~~~~ly~~~-~~g~-K~---~~l~~np~V~~~v~~~~~~~~y~sV~v~G~a~~v~d 95 (148)
T 3u5w_A 22 KHVGRLGYVV-DDRPIIVPMTFRFSGGSFYSFT-TDGQ-KT---NAMRKNDAICILFDQIESQTKWRTVLVQGRYREIAR 95 (148)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECEEETTEEEEEE-CCHH-HH---HHHHHCCEEEEEEEEESSSSSEEEEEEEEEEEECCG
T ss_pred CCEEEEEEcc-CCcEEEEEEEEEEECCEEEEEE-CCch-hH---HHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEeCC
Confidence 4568999996 8999 7888 4688 99 99999999999 764 3468999999999987
Q ss_pred H
Q 036952 212 E 212 (311)
Q Consensus 212 ~ 212 (311)
+
T Consensus 96 ~ 96 (148)
T 3u5w_A 96 E 96 (148)
T ss_dssp G
T ss_pred H
Confidence 4
No 45
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=97.91 E-value=2.1e-05 Score=72.42 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=70.8
Q ss_pred CCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCC-ceeE-eee---------cCeeEEEEEE
Q 036952 151 EPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAV-ETSI-FTY---------QSTTVRVEGS 205 (311)
Q Consensus 151 ~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP-~aal-f~w---------~~rQVRv~G~ 205 (311)
+-..++|||++++|.| +|++..-|+ |. ++|.+|| +||| +.= ..+=|.+.|+
T Consensus 97 ~~~~~~LAT~~~~G~P~~S~v~f~~~~g~~~iliS~lA~-Ht---~NL~~np~rvSllviede~~~~~~~a~~Rlt~~g~ 172 (259)
T 3gas_A 97 GFDSVCLATLHPNGHVVCSYAPLMSDGKQYYIYVSEVAE-HF---AGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTN 172 (259)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEEEEETTEEEEEEETTSH-HH---HHHHHSTTSEEEEEECCTTTSSBTTBCCEEEEEEE
T ss_pred hCCEEEEEeeCcCCCEEEEEEEEEEECCEEEEEEeCchH-HH---HHHHhCCCeEEEEEEeCccccCChhhcCeEEEEEE
Confidence 5678999999999999 788888899 99 9999999 9999 532 3467899999
Q ss_pred EEEeChHHHHHHHhcCCcccccceecCCCCCCCCChHHHHHHHHHHHhhccCC---C-CCCCCCCeeEEEEEceEEEEEe
Q 036952 206 VEKVSDEESEQYFHSRPRGSQIGAIVSKQSSVIPGRHVLYQQYKELEEKFSDW---S-LIPKPEFWGGYRLKPELFEFWQ 281 (311)
Q Consensus 206 a~~l~~~es~~yf~~rp~~sqi~a~~s~qs~~i~~r~~l~~~~~~~~~~~~~~---~-~~p~p~~w~gy~l~P~~iEfwq 281 (311)
|+.+.+++ .| .+....+..+|+.. + -... ..|.-|+|+|..+-|-.
T Consensus 173 A~~v~~~~---~~--------------------------~~~~~~~~~r~p~~~~~~~~~~~-~DF~l~rl~p~~~r~v~ 222 (259)
T 3gas_A 173 TRFIERGA---EF--------------------------DKAFDSFIEKTGGAGGIKTIRAM-QDFHLIALDFKEGRFVK 222 (259)
T ss_dssp EEEECSSH---HH--------------------------HHHHHHHHHHHCSTTTHHHHHTC-TTEEEEEEEEEEEEEEE
T ss_pred EEECCCch---HH--------------------------HHHHHHHHHHcCCchhhHhcccC-CCeEEEEEEEeEEEEEc
Confidence 99998631 11 11122233344320 0 0122 36899999999999866
Q ss_pred CC
Q 036952 282 GQ 283 (311)
Q Consensus 282 ~~ 283 (311)
|-
T Consensus 223 GF 224 (259)
T 3gas_A 223 GF 224 (259)
T ss_dssp ET
T ss_pred cc
Confidence 54
No 46
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=97.82 E-value=0.00011 Score=65.52 Aligned_cols=56 Identities=13% Similarity=0.100 Sum_probs=48.4
Q ss_pred CCceEEEeeC----CCCce----------------EEEeCCCCccccccccccccCCceeE-eee---------------
Q 036952 152 PNAMALSTVG----KDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--------------- 195 (311)
Q Consensus 152 p~a~~LATv~----~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--------------- 195 (311)
...++|||++ ++|.| +|+|...++ |. ++|..||+|++ |.-
T Consensus 55 ~~~~~Lat~~~~~~~dg~P~v~Pv~f~~d~~~~~Lyfhta~~~~-K~---~~l~~np~V~~~v~~~~~~v~~~~~~~~t~ 130 (216)
T 2vpa_A 55 GTIARVATLWQGEDGAAFPFITPLAYAYRPEQGDLVYHTNVVGR-LR---ANAGQGHPATLEVSEIGQFLPSNSPLELSV 130 (216)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEECEEETTTTEEEEECCCCCS-SB---SSCSSEEEEEEEEEEEEEEECCSSGGGCEE
T ss_pred CCEEEEEEccCCCCCCCceEEEEEEEEEECCeeEEEEEecCcCH-HH---HHhccCCcEEEEEEeCCeeccCccCCCCcc
Confidence 5678999999 78988 678888899 99 99999999999 755
Q ss_pred cCeeEEEEEEEEEeChH
Q 036952 196 QSTTVRVEGSVEKVSDE 212 (311)
Q Consensus 196 ~~rQVRv~G~a~~l~~~ 212 (311)
..+.|.|.|+|+.+ ++
T Consensus 131 ~y~sV~v~G~a~~v-d~ 146 (216)
T 2vpa_A 131 QYRSVMVFGTARVL-AG 146 (216)
T ss_dssp EEEEEEEEEEEEEC-CH
T ss_pred cEEEEEEEEEEEEE-CH
Confidence 15889999999999 53
No 47
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=97.67 E-value=0.00017 Score=60.05 Aligned_cols=57 Identities=11% Similarity=0.042 Sum_probs=40.9
Q ss_pred CCCCceEEEeeCCCCce--------------EEEeCCCCccccccccccccCCceeE-eee----cCeeEEEEEEEEEeC
Q 036952 150 REPNAMALSTVGKDGKP--------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY----QSTTVRVEGSVEKVS 210 (311)
Q Consensus 150 ~~p~a~~LATv~~dG~P--------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w----~~rQVRv~G~a~~l~ 210 (311)
.......|||++ ||.| +|+|.. .+ |. ..|+.||+||+ ... ....|.+.|+|+.++
T Consensus 19 ~~~~~g~La~~~-dg~P~vvPv~f~~~~~~iyfh~a~-g~-K~---~~i~~~~~V~f~vd~~~~~~~~SV~v~G~a~~v~ 92 (138)
T 3fkh_A 19 QSVSLGRVVVRR-SDEMDIFPVNFIVDKGAIYIRTAE-GN-KL---FSMNLNHDVLFEADEVKDGKAWSVVVRATAEIVR 92 (138)
T ss_dssp TTCSEEEEEEEE-TTEEEEEEEEEEEETTEEEEEEEC-------------CCSEEEEEEEEEETTEEEEEEEEEEEEECC
T ss_pred ccCCEEEEEEee-CCEEEEEEEEEEEECCEEEEEeCC-Ch-HH---HHhhcCCCEEEEEEECCCCCCEEEEEEEEEEEEC
Confidence 356679999998 9999 788876 77 99 99999999999 664 345899999999998
Q ss_pred hH
Q 036952 211 DE 212 (311)
Q Consensus 211 ~~ 212 (311)
+.
T Consensus 93 d~ 94 (138)
T 3fkh_A 93 KL 94 (138)
T ss_dssp SH
T ss_pred CH
Confidence 64
No 48
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=96.88 E-value=0.00073 Score=57.19 Aligned_cols=53 Identities=15% Similarity=0.057 Sum_probs=39.1
Q ss_pred ceEEEeeCCCCce---------------EEEeCCCCccccccccccccCCceeE-ee---e--cCeeEEEEEEEEEe
Q 036952 154 AMALSTVGKDGKP---------------FWYSTSTGQVKSWCKRWLPVAVETSI-FT---Y--QSTTVRVEGSVEKV 209 (311)
Q Consensus 154 a~~LATv~~dG~P---------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~---w--~~rQVRv~G~a~~l 209 (311)
..+|||+|.||.| +.+.|-..+ |. .++|.+||+||+ |+ - ..++.|+.+....+
T Consensus 32 ~~~LATAdkdG~PNVa~~~~~~~~Dd~tI~iad~f~~-kT--~~NL~eNP~aav~~~~~~~~~~~KG~Rl~l~~~e~ 105 (148)
T 3in6_A 32 STTLSTVDRNYEVNIAVISVLEMIGDDTIICARFGAD-KT--YANLKETGKGVFMVLLTDNDKSKDGIRVYVELSAD 105 (148)
T ss_dssp SEEEEEECTTCCEEEEECCCEEEETTTEEEEEESSCH-HH--HHHHHHHCEEEEEEEEESSSCEEEEEEEEEEEEEE
T ss_pred eEEEEEcCCCCCccEEEEeeeEEecCCEEEEEeccch-hH--HHHHHhCCcEEEEEEEcCCCCccceEEEEEEEEEE
Confidence 5799999999999 555544444 33 389999999999 77 2 56778887754443
No 49
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=96.01 E-value=0.0067 Score=49.61 Aligned_cols=56 Identities=14% Similarity=0.140 Sum_probs=42.2
Q ss_pred CCceEEEeeCCCCce------------------EEEeCCCCccccccccccccCCceeE-eee--------cCeeEEEEE
Q 036952 152 PNAMALSTVGKDGKP------------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY--------QSTTVRVEG 204 (311)
Q Consensus 152 p~a~~LATv~~dG~P------------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w--------~~rQVRv~G 204 (311)
-..+.|||++ ||.| ++..++-.+ -- ++|++||+++| ++- .+.=++|+|
T Consensus 13 ~~~~~iaT~~-~g~Pnvvptw~~~~~v~dD~~ili~~~~~~k-T~---~Nl~~N~kvai~v~~~e~~g~~g~~~gf~ikG 87 (122)
T 3a6r_A 13 QGVVAIATQG-EDGPHLVNTWNSYLKVLDGNRIVVPVGGMHK-TE---ANVARDERVLMTLGSRKVAGRNGPGTGFLIRG 87 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEEGGGCEEETTTEEEEEESSCHH-HH---HHHHHCCEEEEEEEEEEEECSSSEEEEEEEEE
T ss_pred CCeEEEEEcC-CCCCcEEeeeceEEEEecCCEEEEEccccHH-HH---HHHhhCCeEEEEEEecccccccCCCceEEEEE
Confidence 3458899999 9999 334444433 34 89999999999 552 236799999
Q ss_pred EEEEeChH
Q 036952 205 SVEKVSDE 212 (311)
Q Consensus 205 ~a~~l~~~ 212 (311)
+|+.+++.
T Consensus 88 ta~~~~~G 95 (122)
T 3a6r_A 88 SAAFRTDG 95 (122)
T ss_dssp EEEEESSS
T ss_pred EEEEEecc
Confidence 99999854
No 50
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=92.43 E-value=1.4 Score=38.23 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=41.1
Q ss_pred CceEEEeeCCCCce----------------EEEeCCCCccccccccccccCCceeE-eee-------------------c
Q 036952 153 NAMALSTVGKDGKP----------------FWYSTSTGQVKSWCKRWLPVAVETSI-FTY-------------------Q 196 (311)
Q Consensus 153 ~a~~LATv~~dG~P----------------~F~T~~~S~~K~~~~~eL~~NP~aal-f~w-------------------~ 196 (311)
...+|+|++ +|.| +||....++ |. +.|.. |.|++ |.= -
T Consensus 23 ~~g~L~~~~-~~~py~~plpf~~~~~~~~Ly~H~A~~n~-k~---~~l~~-~~V~~~~~g~~~yisps~y~~~~~vpT~n 96 (202)
T 2ol5_A 23 SFATLVSMH-QRELFATHLPLLLDREKTCLYGHFARSNP-QW---NDIQH-QTVLAIFHGPHCYISPSWYETNQAVPTWN 96 (202)
T ss_dssp CEEEEEEEE-TTEEEEEEEECEECTTSSEEEEEEETTSG-GG---GGCTT-SCEEEEEEEEEEEECGGGSSCSCCCCEEE
T ss_pred CEEEEEEcc-CCccEEEEeeEEEECCCCEEEEEECCcCh-HH---HhhCC-CCEEEEEEcCCEEechhhcccCCCCCCcc
Confidence 457888887 4566 678888888 99 99988 99888 543 2
Q ss_pred CeeEEEEEEEEEeCh
Q 036952 197 STTVRVEGSVEKVSD 211 (311)
Q Consensus 197 ~rQVRv~G~a~~l~~ 211 (311)
.+.|.+.|+++.+++
T Consensus 97 Y~SV~~~G~~~~v~D 111 (202)
T 2ol5_A 97 YVAVHVYGNVELIND 111 (202)
T ss_dssp EEEEEEEEEEEECCC
T ss_pred eEEEEEEEEEEEECC
Confidence 478999999999983
No 51
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=90.44 E-value=0.38 Score=39.03 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=44.6
Q ss_pred CCceEEEeeCC-CCce--------------EE-EeCCC----CccccccccccccCCceeE-eeecCeeEEEEEEEEEeC
Q 036952 152 PNAMALSTVGK-DGKP--------------FW-YSTST----GQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVS 210 (311)
Q Consensus 152 p~a~~LATv~~-dG~P--------------~F-~T~~~----S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~ 210 (311)
...+.|.|++. +|+| ++ .++.. +. .. ++|.+||.|.| .- . -++.++|+.++
T Consensus 15 ~p~~~Ltt~GRkSG~pr~tPv~~~~~g~~~~vvas~~G~~~~p~-W~---~Nl~A~P~v~v~~~--~--~~~~~~A~~l~ 86 (122)
T 3r5l_A 15 IPVALLTTTGRKTGQPRVNPLYFLRDGGRVIVAASKGGAEKNPM-WY---LNLKANPKVQVQIK--K--EVLDLTARDAT 86 (122)
T ss_dssp CCCEEEEEECTTTCSEEEEEEEEEEETTEEEEECSCCGGGCSCH-HH---HHHHHCCEEEEEET--T--EEEEEEEEECC
T ss_pred CcEEEEEEcCCCCCCEEEEEEEEEEECCEEEEEEecCCCCCCCH-HH---HhhccCCcEEEEEC--C--EEEEEEEEECC
Confidence 45689999995 7999 22 23333 34 45 99999999998 42 2 26789999999
Q ss_pred hHHHHHHHh
Q 036952 211 DEESEQYFH 219 (311)
Q Consensus 211 ~~es~~yf~ 219 (311)
++|.++.|.
T Consensus 87 ~~Er~~~~~ 95 (122)
T 3r5l_A 87 DEERAEYWP 95 (122)
T ss_dssp HHHHHHHHH
T ss_pred cchHHHHHH
Confidence 999988884
No 52
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=72.47 E-value=3.7 Score=34.23 Aligned_cols=61 Identities=15% Similarity=0.110 Sum_probs=44.2
Q ss_pred CCceEEEeeC-CCCce---------------EEEeCC----CCccccccccccccCCceeE-eeecCeeEEEEEEEEEeC
Q 036952 152 PNAMALSTVG-KDGKP---------------FWYSTS----TGQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVS 210 (311)
Q Consensus 152 p~a~~LATv~-~dG~P---------------~F~T~~----~S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~ 210 (311)
...+.|.|++ .+|+| ++.++. ++. -. ++|.+||.|.| .- . -+..++|+.++
T Consensus 39 ~p~~lLtt~GRkSG~~r~tPl~~~~~~g~~~vVas~gG~~~~p~-W~---~Nl~A~p~v~v~~g--~--~~~~~~Ar~~~ 110 (147)
T 3r5y_A 39 RPLVILTTVGRKTGALRKTPVMRVEHDGRYAVVASQGGAPTHPA-WY---FNLVADPRAQLRDK--D--AVLSVVARELA 110 (147)
T ss_dssp EEEEEEEEECTTTCCEEEEEEECCEETTEEEEECCGGGCSSCCH-HH---HHHHHCCEEEEEET--T--EEEEEEEEECC
T ss_pred ccEEEEEEcCCCCCCEEEEEEEEEEECCEEEEEEcCCCCCCCCh-HH---HhhhhCCcEEEEEC--C--EEEEEEEEECC
Confidence 3468899998 47999 333443 234 44 79999999988 42 1 25778899999
Q ss_pred hHHHHHHHhc
Q 036952 211 DEESEQYFHS 220 (311)
Q Consensus 211 ~~es~~yf~~ 220 (311)
++|.++.|..
T Consensus 111 ~~Er~~~w~~ 120 (147)
T 3r5y_A 111 GPERAEWWER 120 (147)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 9999988843
No 53
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=69.74 E-value=5.5 Score=33.13 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=43.1
Q ss_pred CceEEEeeC-CCCce---------------EEEeCCCC----ccccccccccccCCceeE-eeecCeeEEEEEEEEEeCh
Q 036952 153 NAMALSTVG-KDGKP---------------FWYSTSTG----QVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVEKVSD 211 (311)
Q Consensus 153 ~a~~LATv~-~dG~P---------------~F~T~~~S----~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~~l~~ 211 (311)
..+.|.|++ .+|+| ++.++..+ . =. ++|.+||.|.+ .- . -+..++|+.+++
T Consensus 38 p~~lLtt~GRkSG~~r~tPl~~~~~~~~~~vVas~gG~~~~p~-W~---~Nl~A~p~v~v~~g--~--~~~~~~Ar~~~~ 109 (145)
T 3r5z_A 38 PVVVLTTKGAKTGKLRKTPLMRVEHNGEYAVVASLGGAPKHPV-WY---HNIKAEPHVELRDG--T--EVGDYTAREVTG 109 (145)
T ss_dssp EEEEEEEECTTTCCEEEEEEECEEETTEEEEECCBTTBSSCCH-HH---HHHHHCCEEEEEET--T--EEEEEEEEECCH
T ss_pred eEEEEEEcCCCCCCEEEEEEEEEEECCEEEEEEcCCCCCCCCh-HH---HHhhhCCcEEEEEC--C--EEEEEEEEECCc
Confidence 457899998 56999 34444433 3 23 79999999988 42 1 256788999999
Q ss_pred HHHHHHHhc
Q 036952 212 EESEQYFHS 220 (311)
Q Consensus 212 ~es~~yf~~ 220 (311)
+|.++.|..
T Consensus 110 ~Er~~~w~~ 118 (145)
T 3r5z_A 110 EEKRVWWER 118 (145)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999988843
No 54
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=50.00 E-value=15 Score=30.35 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=42.3
Q ss_pred CCceEEEeeC-CCCce-----EEEeCC-----------------CCccccccccccccCCceeE-eeecCeeEEEEEEEE
Q 036952 152 PNAMALSTVG-KDGKP-----FWYSTS-----------------TGQVKSWCKRWLPVAVETSI-FTYQSTTVRVEGSVE 207 (311)
Q Consensus 152 p~a~~LATv~-~dG~P-----~F~T~~-----------------~S~~K~~~~~eL~~NP~aal-f~w~~rQVRv~G~a~ 207 (311)
...+.|.|++ .+|+| .++.+. ++. -. ++|.+||.|.+ .- . -+..++|+
T Consensus 30 ~~~llLtt~GRkSG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~-W~---~Nl~A~p~v~v~~g--~--~~~~~~A~ 101 (143)
T 3h96_A 30 APMVLVHHVGRKTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPA-WY---YNLTTAGTAQVEVG--T--ETYAVGVT 101 (143)
T ss_dssp SCEEEEEEECTTTCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCH-HH---HHHHHHSEEEEEET--T--EEEEEEEE
T ss_pred CcEEEEEEcCCCCCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCCh-HH---HhhhhCCcEEEEEC--C--EEEEEEEE
Confidence 4568899998 46999 222222 122 22 79999999888 42 1 25788889
Q ss_pred EeChHHHHHHHhc
Q 036952 208 KVSDEESEQYFHS 220 (311)
Q Consensus 208 ~l~~~es~~yf~~ 220 (311)
.++++|.++.|..
T Consensus 102 ~~~~~Er~~~~~~ 114 (143)
T 3h96_A 102 EVTGEDRDRIYSE 114 (143)
T ss_dssp EECHHHHHHHHHH
T ss_pred ecCchHHHHHHHH
Confidence 9999999988843
No 55
>3lyd_A Uncharacterized protein; PSI-2, MCSG, GEBA, genomic encyclopae bacteria and archaea, structural genomics, protein structur initiative; HET: MSE; 1.45A {Jonesia denitrificans}
Probab=47.08 E-value=11 Score=31.82 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=14.9
Q ss_pred CCcEEEEEcCCCCCCCCC
Q 036952 26 RPVIVSVDIPSGWHVEEG 43 (311)
Q Consensus 26 ~~~vvaiDiPSG~~~d~G 43 (311)
.-|.++||+|-||...+.
T Consensus 16 ~~p~~~v~~P~gWe~~~~ 33 (161)
T 3lyd_A 16 ALTGFTVPIPETWQPDPT 33 (161)
T ss_dssp CCCEEEEECCTTEEECTT
T ss_pred CCceeeccCCCCceEcCC
Confidence 458999999999987744
Done!