Query 036953
Match_columns 792
No_of_seqs 442 out of 3258
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 11:40:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036953.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036953hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.2E-28 4.2E-33 266.4 34.1 267 26-352 16-332 (344)
2 1vyh_C Platelet-activating fac 100.0 1.2E-27 4E-32 262.8 30.8 266 38-349 105-409 (410)
3 3ow8_A WD repeat-containing pr 100.0 2.2E-27 7.7E-32 252.5 30.8 282 25-349 17-319 (321)
4 1nr0_A Actin interacting prote 100.0 9.3E-27 3.2E-31 268.8 37.4 211 22-235 79-379 (611)
5 4g56_B MGC81050 protein; prote 100.0 1.8E-27 6.2E-32 256.9 29.1 270 23-352 25-344 (357)
6 1got_B GT-beta; complex (GTP-b 100.0 6E-27 2E-31 249.8 32.5 268 34-348 48-340 (340)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-27 8.3E-32 253.7 28.7 275 37-355 11-339 (345)
8 2ynn_A Coatomer subunit beta'; 100.0 7.7E-27 2.6E-31 245.1 31.8 246 34-353 6-261 (304)
9 3frx_A Guanine nucleotide-bind 100.0 8.7E-27 3E-31 246.7 32.0 272 35-352 11-318 (319)
10 2pbi_B Guanine nucleotide-bind 100.0 8.9E-27 3E-31 250.9 31.8 262 31-348 54-354 (354)
11 4ery_A WD repeat-containing pr 100.0 8.1E-26 2.8E-30 235.7 34.2 256 36-310 18-295 (312)
12 2xzm_R RACK1; ribosome, transl 99.9 1.2E-25 4.2E-30 239.5 32.9 276 35-352 15-341 (343)
13 1nr0_A Actin interacting prote 99.9 1.6E-25 5.6E-30 258.5 34.5 227 24-251 39-352 (611)
14 3sfz_A APAF-1, apoptotic pepti 99.9 2.4E-25 8.1E-30 274.4 37.1 274 37-352 611-914 (1249)
15 1erj_A Transcriptional repress 99.9 1.5E-25 5.3E-30 243.9 30.6 282 40-354 63-392 (393)
16 2ynn_A Coatomer subunit beta'; 99.9 4.5E-25 1.5E-29 231.6 32.0 241 22-310 33-288 (304)
17 3iz6_a 40S ribosomal protein R 99.9 3.1E-26 1.1E-30 248.3 22.6 274 35-352 60-376 (380)
18 2ymu_A WD-40 repeat protein; u 99.9 1.4E-24 4.8E-29 244.2 34.6 294 22-348 241-577 (577)
19 1got_B GT-beta; complex (GTP-b 99.9 7.6E-25 2.6E-29 233.5 30.6 225 22-250 75-339 (340)
20 2hes_X YDR267CP; beta-propelle 99.9 9.7E-25 3.3E-29 232.1 30.7 267 37-350 10-327 (330)
21 2pm7_B Protein transport prote 99.9 1.2E-24 4.3E-29 227.5 29.9 242 39-350 7-284 (297)
22 1gxr_A ESG1, transducin-like e 99.9 8.3E-24 2.9E-28 218.7 34.5 237 23-310 71-322 (337)
23 1vyh_C Platelet-activating fac 99.9 7.4E-25 2.5E-29 240.5 26.5 234 90-353 103-371 (410)
24 4gga_A P55CDC, cell division c 99.9 6.7E-24 2.3E-28 232.3 33.8 251 76-355 122-399 (420)
25 4e54_B DNA damage-binding prot 99.9 7.6E-25 2.6E-29 241.3 25.5 195 39-250 117-323 (435)
26 4aow_A Guanine nucleotide-bind 99.9 1.3E-23 4.5E-28 218.5 33.2 272 36-353 33-339 (340)
27 3ow8_A WD repeat-containing pr 99.9 3.4E-24 1.2E-28 228.0 29.2 228 21-252 55-319 (321)
28 4ggc_A P55CDC, cell division c 99.9 2E-23 6.7E-28 215.1 33.0 264 44-354 28-318 (318)
29 3zwl_B Eukaryotic translation 99.9 1.4E-23 4.7E-28 219.3 31.8 270 37-352 28-347 (369)
30 2pbi_B Guanine nucleotide-bind 99.9 9.1E-24 3.1E-28 227.4 30.7 226 21-250 83-353 (354)
31 3dm0_A Maltose-binding peripla 99.9 7.5E-24 2.6E-28 247.3 32.1 269 36-350 377-692 (694)
32 4gqb_B Methylosome protein 50; 99.9 3E-24 1E-28 232.0 26.0 209 22-250 101-327 (344)
33 2pm9_A Protein WEB1, protein t 99.9 6.1E-24 2.1E-28 227.7 27.8 288 21-352 42-415 (416)
34 3ei3_B DNA damage-binding prot 99.9 3.7E-23 1.3E-27 221.4 33.4 252 36-310 68-368 (383)
35 3bg1_A Protein SEC13 homolog; 99.9 1E-24 3.5E-29 230.5 20.2 246 38-350 10-292 (316)
36 3f3f_A Nucleoporin SEH1; struc 99.9 1.1E-23 3.7E-28 216.5 27.2 274 35-352 5-338 (351)
37 3k26_A Polycomb protein EED; W 99.9 1.6E-23 5.5E-28 219.1 29.0 271 39-349 16-364 (366)
38 2ymu_A WD-40 repeat protein; u 99.9 6.7E-23 2.3E-27 230.5 35.1 295 22-349 200-537 (577)
39 1gxr_A ESG1, transducin-like e 99.9 1E-22 3.5E-27 210.5 33.0 237 39-353 49-298 (337)
40 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.1E-23 3.8E-28 225.2 26.5 208 90-351 10-225 (345)
41 2aq5_A Coronin-1A; WD40 repeat 99.9 5.6E-24 1.9E-28 230.4 24.4 272 18-354 4-302 (402)
42 3jrp_A Fusion protein of prote 99.9 2.7E-23 9.3E-28 218.4 28.6 249 37-352 7-288 (379)
43 4aez_A CDC20, WD repeat-contai 99.9 1.2E-22 4.2E-27 220.6 34.0 259 22-354 111-383 (401)
44 3dwl_C Actin-related protein 2 99.9 7.1E-24 2.4E-28 225.6 23.4 194 40-250 10-232 (377)
45 3vl1_A 26S proteasome regulato 99.9 3.3E-23 1.1E-27 223.2 28.9 265 23-307 77-398 (420)
46 2j04_B YDR362CP, TAU91; beta p 99.9 3E-24 1E-28 246.4 21.9 287 21-349 180-515 (524)
47 3iz6_a 40S ribosomal protein R 99.9 1.4E-23 4.9E-28 227.4 25.9 230 21-251 85-372 (380)
48 1k8k_C P40, ARP2/3 complex 41 99.9 4.9E-23 1.7E-27 216.9 29.0 271 39-352 6-362 (372)
49 4h5i_A Guanine nucleotide-exch 99.9 1.3E-23 4.6E-28 227.6 25.2 246 40-349 72-341 (365)
50 2pm9_A Protein WEB1, protein t 99.9 7.8E-24 2.7E-28 226.9 22.2 277 43-354 14-340 (416)
51 1pgu_A Actin interacting prote 99.9 1.1E-21 3.7E-26 220.7 40.3 263 23-350 38-365 (615)
52 2aq5_A Coronin-1A; WD40 repeat 99.9 2.1E-22 7.1E-27 218.2 32.7 245 21-310 54-329 (402)
53 3frx_A Guanine nucleotide-bind 99.9 4.7E-22 1.6E-26 210.4 34.0 201 21-242 37-256 (319)
54 4a11_B DNA excision repair pro 99.9 6.6E-22 2.2E-26 210.0 33.8 275 37-355 39-369 (408)
55 4ery_A WD repeat-containing pr 99.9 2.9E-22 9.8E-27 208.8 29.7 158 90-251 18-177 (312)
56 1r5m_A SIR4-interacting protei 99.9 1.6E-22 5.6E-27 215.3 28.3 264 42-353 46-363 (425)
57 1r5m_A SIR4-interacting protei 99.9 1.7E-22 5.7E-27 215.3 28.1 261 41-349 108-423 (425)
58 3i2n_A WD repeat-containing pr 99.9 9.9E-23 3.4E-27 212.8 25.6 281 23-352 43-354 (357)
59 1sq9_A Antiviral protein SKI8; 99.9 1E-22 3.6E-27 217.2 26.1 269 35-352 10-396 (397)
60 2pm7_B Protein transport prote 99.9 3E-22 1E-26 209.4 28.7 210 91-352 5-239 (297)
61 4g56_B MGC81050 protein; prote 99.9 5.6E-23 1.9E-27 221.8 23.5 228 67-352 52-302 (357)
62 2j04_B YDR362CP, TAU91; beta p 99.9 1.8E-23 6.2E-28 240.0 20.0 251 41-351 133-428 (524)
63 3mmy_A MRNA export factor; mRN 99.9 4.9E-22 1.7E-26 207.5 28.3 230 37-310 35-331 (368)
64 2xzm_R RACK1; ribosome, transl 99.9 1.8E-22 6.2E-27 215.0 25.3 203 89-349 15-242 (343)
65 4aow_A Guanine nucleotide-bind 99.9 1.9E-21 6.7E-26 202.1 32.1 227 22-249 59-332 (340)
66 3mkq_A Coatomer beta'-subunit; 99.9 2.9E-22 9.8E-27 234.8 28.7 245 34-352 6-260 (814)
67 1erj_A Transcriptional repress 99.9 1.8E-21 6.2E-26 211.8 32.9 180 71-251 137-338 (393)
68 3dw8_B Serine/threonine-protei 99.9 1.4E-21 4.8E-26 211.9 30.4 193 39-250 26-311 (447)
69 2hes_X YDR267CP; beta-propelle 99.9 9.6E-22 3.3E-26 209.0 27.1 206 91-352 10-231 (330)
70 3vl1_A 26S proteasome regulato 99.9 7.8E-22 2.7E-26 212.5 25.5 228 69-352 68-323 (420)
71 3sfz_A APAF-1, apoptotic pepti 99.9 1.8E-21 6E-26 240.0 31.1 210 22-251 635-910 (1249)
72 1yfq_A Cell cycle arrest prote 99.9 1.3E-21 4.5E-26 204.0 25.3 248 39-310 9-308 (342)
73 3odt_A Protein DOA1; ubiquitin 99.9 1.1E-20 3.7E-25 193.7 31.3 249 22-353 37-298 (313)
74 2xyi_A Probable histone-bindin 99.9 3.5E-21 1.2E-25 212.0 28.1 238 70-352 142-411 (430)
75 3i2n_A WD repeat-containing pr 99.9 5E-22 1.7E-26 207.5 20.2 247 39-353 16-293 (357)
76 4aez_A CDC20, WD repeat-contai 99.9 1.2E-20 4E-25 205.0 31.6 226 70-352 104-337 (401)
77 4e54_B DNA damage-binding prot 99.9 4.8E-22 1.7E-26 218.9 20.9 205 92-352 116-328 (435)
78 3jrp_A Fusion protein of prote 99.9 2.9E-21 9.9E-26 203.0 25.8 211 90-353 6-242 (379)
79 3bg1_A Protein SEC13 homolog; 99.9 2.9E-22 1E-26 211.7 18.2 210 90-351 8-247 (316)
80 3f3f_A Nucleoporin SEH1; struc 99.9 8.1E-21 2.8E-25 195.0 28.1 209 91-352 7-250 (351)
81 3zwl_B Eukaryotic translation 99.9 6.7E-21 2.3E-25 199.0 27.1 206 91-352 28-250 (369)
82 3gre_A Serine/threonine-protei 99.9 8.9E-22 3E-26 214.4 20.6 258 39-355 61-363 (437)
83 3dwl_C Actin-related protein 2 99.9 9.6E-22 3.3E-26 209.1 19.8 205 22-244 31-271 (377)
84 4gq1_A NUP37; propeller, trans 99.9 2.7E-21 9.4E-26 211.0 23.8 228 68-310 100-375 (393)
85 1pgu_A Actin interacting prote 99.9 1.7E-20 5.7E-25 211.1 30.9 204 22-231 86-347 (615)
86 1k8k_C P40, ARP2/3 complex 41 99.9 4E-21 1.4E-25 202.3 23.3 231 93-351 6-274 (372)
87 3dm0_A Maltose-binding peripla 99.9 1.4E-20 4.7E-25 219.8 30.1 231 20-251 401-690 (694)
88 3jro_A Fusion protein of prote 99.9 4.5E-21 1.5E-25 227.6 26.1 249 37-352 5-286 (753)
89 3mkq_A Coatomer beta'-subunit; 99.9 2.6E-20 8.7E-25 218.3 31.3 238 22-307 33-283 (814)
90 3ei3_B DNA damage-binding prot 99.9 2.3E-20 8E-25 199.6 27.4 202 90-352 68-283 (383)
91 4h5i_A Guanine nucleotide-exch 99.9 2.1E-21 7.2E-26 210.4 19.4 253 42-354 15-303 (365)
92 3gre_A Serine/threonine-protei 99.9 3.8E-21 1.3E-25 209.4 21.3 266 22-310 84-425 (437)
93 4gga_A P55CDC, cell division c 99.9 4.5E-20 1.5E-24 201.9 29.6 227 23-252 124-393 (420)
94 3v7d_B Cell division control p 99.9 1.9E-20 6.4E-25 205.5 26.5 252 68-354 131-424 (464)
95 2oaj_A Protein SNI1; WD40 repe 99.9 8.4E-21 2.9E-25 230.6 26.1 203 40-244 16-296 (902)
96 3k26_A Polycomb protein EED; W 99.9 7.1E-21 2.4E-25 199.0 21.8 214 23-251 43-315 (366)
97 3lrv_A PRE-mRNA-splicing facto 99.9 9.1E-21 3.1E-25 201.5 22.8 178 72-250 88-288 (343)
98 3odt_A Protein DOA1; ubiquitin 99.9 1.5E-19 5.3E-24 185.1 28.3 235 35-353 12-257 (313)
99 3dw8_B Serine/threonine-protei 99.9 6.3E-20 2.2E-24 198.8 26.1 214 91-314 173-436 (447)
100 3mmy_A MRNA export factor; mRN 99.9 7.5E-20 2.6E-24 190.9 25.6 231 90-353 34-306 (368)
101 3v7d_B Cell division control p 99.9 5.8E-19 2E-23 193.7 33.7 262 21-310 139-447 (464)
102 1sq9_A Antiviral protein SKI8; 99.9 7.7E-20 2.7E-24 195.0 25.8 207 22-248 89-389 (397)
103 2j04_A TAU60, YPL007P, hypothe 99.8 1.6E-20 5.4E-25 216.8 20.5 245 41-319 85-355 (588)
104 1p22_A F-BOX/WD-repeat protein 99.8 1.5E-19 5E-24 198.5 27.3 245 68-354 142-417 (435)
105 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.8E-19 6.1E-24 199.0 27.2 198 43-250 6-267 (450)
106 2ovr_B FBW7, F-BOX/WD repeat p 99.8 7.7E-19 2.6E-23 192.7 32.1 228 69-310 169-423 (445)
107 4a11_B DNA excision repair pro 99.8 1.6E-19 5.5E-24 191.6 25.7 221 91-353 39-278 (408)
108 2j04_A TAU60, YPL007P, hypothe 99.8 8E-20 2.7E-24 210.9 24.9 267 42-350 16-320 (588)
109 1yfq_A Cell cycle arrest prote 99.8 7.9E-20 2.7E-24 190.5 22.4 228 92-353 8-284 (342)
110 2vdu_B TRNA (guanine-N(7)-)-me 99.8 3.8E-19 1.3E-23 196.3 28.7 224 42-310 103-370 (450)
111 2oaj_A Protein SNI1; WD40 repe 99.8 5.5E-20 1.9E-24 223.4 23.2 211 91-354 13-245 (902)
112 4ggc_A P55CDC, cell division c 99.8 1E-18 3.5E-23 179.8 28.4 226 23-251 44-312 (318)
113 2ovr_B FBW7, F-BOX/WD repeat p 99.8 6.9E-19 2.4E-23 193.1 28.5 245 69-353 129-393 (445)
114 1l0q_A Surface layer protein; 99.8 3.3E-18 1.1E-22 182.7 32.6 258 22-352 10-276 (391)
115 2xyi_A Probable histone-bindin 99.8 5.5E-19 1.9E-23 194.5 24.8 214 22-250 149-406 (430)
116 3bws_A Protein LP49; two-domai 99.8 5.3E-18 1.8E-22 183.7 30.9 251 23-310 143-416 (433)
117 3jro_A Fusion protein of prote 99.8 5.3E-19 1.8E-23 209.8 24.6 211 90-353 4-240 (753)
118 3lrv_A PRE-mRNA-splicing facto 99.8 4.2E-19 1.5E-23 188.7 21.3 179 67-251 46-241 (343)
119 3vu4_A KMHSV2; beta-propeller 99.8 5.1E-19 1.7E-23 190.4 21.4 205 39-245 17-327 (355)
120 3bws_A Protein LP49; two-domai 99.8 3.3E-18 1.1E-22 185.3 27.5 237 71-352 136-391 (433)
121 1l0q_A Surface layer protein; 99.8 6.4E-18 2.2E-22 180.5 27.6 205 71-310 4-215 (391)
122 2w18_A PALB2, fancn, partner a 99.8 1.3E-18 4.5E-23 190.2 20.8 203 43-251 113-354 (356)
123 4gq1_A NUP37; propeller, trans 99.8 1.6E-18 5.5E-23 189.1 21.1 211 22-243 109-379 (393)
124 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.8E-17 2.7E-21 177.9 28.1 198 79-310 159-369 (415)
125 1p22_A F-BOX/WD-repeat protein 99.8 4E-17 1.4E-21 179.1 23.9 222 93-353 131-367 (435)
126 3vu4_A KMHSV2; beta-propeller 99.8 8.2E-17 2.8E-21 173.2 24.9 203 91-352 15-272 (355)
127 2w18_A PALB2, fancn, partner a 99.7 1.2E-16 4.1E-21 174.7 24.8 198 95-349 111-355 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.9E-16 2E-20 170.8 30.2 237 24-307 159-410 (415)
129 2ojh_A Uncharacterized protein 99.7 1.5E-15 5.2E-20 152.7 23.9 252 22-311 20-288 (297)
130 2ojh_A Uncharacterized protein 99.7 5.9E-15 2E-19 148.3 23.7 204 76-312 19-234 (297)
131 3vgz_A Uncharacterized protein 99.7 5.3E-14 1.8E-18 147.0 29.6 203 76-313 108-332 (353)
132 3u4y_A Uncharacterized protein 99.7 1.7E-14 5.9E-19 150.3 25.7 174 68-243 9-195 (331)
133 2ecf_A Dipeptidyl peptidase IV 99.6 6.4E-15 2.2E-19 171.8 23.9 211 97-314 110-399 (741)
134 2oit_A Nucleoporin 214KDA; NH2 99.6 1.8E-15 6.1E-20 168.9 17.4 146 93-242 90-259 (434)
135 1xfd_A DIP, dipeptidyl aminope 99.6 5.8E-15 2E-19 171.4 22.1 209 22-241 35-323 (723)
136 1nir_A Nitrite reductase; hemo 99.6 1.6E-13 5.4E-18 157.7 31.2 240 69-310 190-494 (543)
137 1ri6_A Putative isomerase YBHE 99.6 1.5E-13 5.2E-18 142.3 27.7 203 22-243 13-250 (343)
138 1nir_A Nitrite reductase; hemo 99.6 6.6E-14 2.3E-18 160.9 27.4 237 69-310 149-436 (543)
139 3u4y_A Uncharacterized protein 99.6 1.9E-13 6.6E-18 142.4 27.7 203 22-243 18-240 (331)
140 1ri6_A Putative isomerase YBHE 99.6 7E-14 2.4E-18 144.9 23.9 165 76-242 12-196 (343)
141 2oit_A Nucleoporin 214KDA; NH2 99.6 2.3E-14 7.8E-19 159.9 21.5 155 43-211 94-280 (434)
142 2ecf_A Dipeptidyl peptidase IV 99.6 2.5E-14 8.4E-19 166.8 22.0 175 44-241 111-354 (741)
143 1pby_B Quinohemoprotein amine 99.6 1.5E-13 5E-18 142.1 25.1 165 71-241 3-191 (337)
144 1xfd_A DIP, dipeptidyl aminope 99.6 8.2E-15 2.8E-19 170.1 17.5 223 43-312 18-323 (723)
145 2z3z_A Dipeptidyl aminopeptida 99.6 1.1E-13 3.7E-18 160.8 24.4 245 24-315 101-421 (706)
146 3hfq_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 141.4 26.9 164 78-243 62-259 (347)
147 2z3z_A Dipeptidyl aminopeptida 99.5 4.9E-13 1.7E-17 155.2 24.3 213 96-314 82-375 (706)
148 3vgz_A Uncharacterized protein 99.5 2.1E-12 7.2E-17 134.9 26.3 162 77-244 162-334 (353)
149 1k32_A Tricorn protease; prote 99.5 7.5E-13 2.6E-17 162.3 26.5 178 43-244 297-492 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.5 6.5E-13 2.2E-17 138.3 22.1 143 67-212 9-178 (349)
151 1pby_B Quinohemoprotein amine 99.5 2.4E-12 8.3E-17 132.9 23.5 136 22-176 9-170 (337)
152 1k32_A Tricorn protease; prote 99.5 9.2E-13 3.1E-17 161.5 23.7 190 95-311 295-488 (1045)
153 3hfq_A Uncharacterized protein 99.5 3.4E-12 1.2E-16 134.7 24.9 148 94-243 38-206 (347)
154 1z68_A Fibroblast activation p 99.5 1.2E-13 4.1E-18 160.9 12.8 211 23-242 35-330 (719)
155 3pe7_A Oligogalacturonate lyas 99.5 2E-11 6.9E-16 130.0 28.3 179 47-243 41-257 (388)
156 3o4h_A Acylamino-acid-releasin 99.4 8.4E-12 2.9E-16 142.1 24.6 242 43-310 23-297 (582)
157 1z68_A Fibroblast activation p 99.4 5.3E-13 1.8E-17 155.5 13.9 206 100-311 20-269 (719)
158 4a5s_A Dipeptidyl peptidase 4 99.4 3.2E-12 1.1E-16 151.0 20.3 206 98-310 19-275 (740)
159 3scy_A Hypothetical bacterial 99.4 6.2E-11 2.1E-15 125.9 28.3 147 94-244 98-279 (361)
160 1jmx_B Amine dehydrogenase; ox 99.4 1.3E-11 4.5E-16 128.3 20.7 202 22-248 19-319 (349)
161 4a5s_A Dipeptidyl peptidase 4 99.4 1.4E-11 4.9E-16 145.4 22.5 176 44-241 19-277 (740)
162 3o4h_A Acylamino-acid-releasin 99.4 4.5E-12 1.5E-16 144.4 17.2 180 95-310 21-210 (582)
163 1jof_A Carboxy-CIS,CIS-muconat 99.3 1E-10 3.5E-15 125.7 24.2 145 96-243 40-212 (365)
164 1jof_A Carboxy-CIS,CIS-muconat 99.3 9.3E-11 3.2E-15 126.0 21.6 146 98-244 85-275 (365)
165 3fvz_A Peptidyl-glycine alpha- 99.3 1.6E-09 5.4E-14 115.0 30.0 249 40-310 22-307 (329)
166 3scy_A Hypothetical bacterial 99.3 3.4E-10 1.2E-14 120.1 24.8 169 72-243 112-325 (361)
167 3pe7_A Oligogalacturonate lyas 99.3 1.4E-10 4.8E-15 123.4 20.9 192 91-310 26-253 (388)
168 3c5m_A Oligogalacturonate lyas 99.3 1E-10 3.5E-15 124.1 17.9 183 44-244 38-258 (396)
169 1q7f_A NHL, brain tumor CG1071 99.2 5.6E-09 1.9E-13 107.1 29.2 142 93-241 74-224 (286)
170 2dg1_A DRP35, lactonase; beta 99.2 6.7E-09 2.3E-13 108.7 29.9 183 42-241 45-250 (333)
171 3azo_A Aminopeptidase; POP fam 99.1 1.1E-09 3.6E-14 126.2 18.4 141 100-243 81-260 (662)
172 2xdw_A Prolyl endopeptidase; a 99.1 1.3E-08 4.5E-13 119.4 26.3 227 43-310 126-395 (710)
173 2bkl_A Prolyl endopeptidase; m 99.1 9.6E-09 3.3E-13 120.4 24.9 185 43-243 122-337 (695)
174 3e5z_A Putative gluconolactona 99.1 3.1E-08 1.1E-12 102.4 25.2 181 42-241 28-235 (296)
175 2gop_A Trilobed protease; beta 99.1 7.1E-09 2.4E-13 108.7 20.2 151 79-244 43-235 (347)
176 2gop_A Trilobed protease; beta 99.1 1.9E-08 6.4E-13 105.5 23.3 171 43-243 60-280 (347)
177 2dg1_A DRP35, lactonase; beta 99.0 3.6E-08 1.2E-12 103.1 24.7 145 93-242 42-200 (333)
178 3azo_A Aminopeptidase; POP fam 99.0 3.6E-09 1.2E-13 121.8 18.5 194 91-310 19-257 (662)
179 1qks_A Cytochrome CD1 nitrite 99.0 1.3E-07 4.3E-12 109.7 28.8 238 71-312 169-520 (567)
180 3dsm_A Uncharacterized protein 99.0 6.6E-08 2.3E-12 102.9 23.7 167 71-242 55-243 (328)
181 1q7f_A NHL, brain tumor CG1071 99.0 5.5E-08 1.9E-12 99.6 22.0 171 68-244 87-270 (286)
182 2oiz_A Aromatic amine dehydrog 98.9 3E-08 1E-12 107.5 20.3 95 78-175 30-146 (361)
183 2oiz_A Aromatic amine dehydrog 98.9 3.3E-08 1.1E-12 107.1 20.2 89 143-236 259-360 (361)
184 3c5m_A Oligogalacturonate lyas 98.9 4E-09 1.4E-13 111.8 12.7 188 96-310 36-253 (396)
185 3fvz_A Peptidyl-glycine alpha- 98.9 2.9E-08 1E-12 105.3 19.2 162 76-243 109-310 (329)
186 1xip_A Nucleoporin NUP159; bet 98.9 1.7E-08 5.8E-13 112.0 17.0 140 92-242 85-232 (388)
187 1rwi_B Serine/threonine-protei 98.9 1.9E-07 6.6E-12 94.1 22.2 141 95-242 66-209 (270)
188 2xdw_A Prolyl endopeptidase; a 98.9 1E-07 3.4E-12 111.9 22.9 146 93-243 122-305 (710)
189 3no2_A Uncharacterized protein 98.9 3.1E-07 1E-11 96.2 23.6 164 69-242 5-183 (276)
190 3e5z_A Putative gluconolactona 98.8 2.5E-07 8.6E-12 95.5 21.6 139 95-242 27-189 (296)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.1E-06 3.6E-11 90.5 23.7 144 94-241 69-243 (314)
192 1rwi_B Serine/threonine-protei 98.8 4.2E-07 1.4E-11 91.7 19.8 169 69-242 77-251 (270)
193 2bkl_A Prolyl endopeptidase; m 98.7 2.4E-07 8.1E-12 108.6 19.3 141 93-242 118-288 (695)
194 1yr2_A Prolyl oligopeptidase; 98.7 3.9E-07 1.3E-11 107.6 20.9 183 43-243 164-381 (741)
195 1xip_A Nucleoporin NUP159; bet 98.7 2.9E-07 9.8E-12 102.2 18.4 179 97-316 39-235 (388)
196 3no2_A Uncharacterized protein 98.7 1E-06 3.4E-11 92.3 21.4 200 22-241 13-230 (276)
197 3dsm_A Uncharacterized protein 98.7 2.1E-06 7.1E-11 91.3 24.1 166 71-242 96-285 (328)
198 2z2n_A Virginiamycin B lyase; 98.7 1.3E-05 4.3E-10 81.3 28.8 140 94-239 55-198 (299)
199 3g4e_A Regucalcin; six bladed 98.7 5.1E-06 1.8E-10 86.6 26.1 207 76-315 32-262 (297)
200 1qks_A Cytochrome CD1 nitrite 98.7 2.6E-06 8.8E-11 98.8 25.1 135 105-242 165-316 (567)
201 3iuj_A Prolyl endopeptidase; h 98.6 1.6E-06 5.5E-11 101.9 22.1 186 43-245 130-347 (693)
202 2ghs_A AGR_C_1268P; regucalcin 98.6 1.5E-05 5.3E-10 84.5 27.2 141 95-241 89-247 (326)
203 3dr2_A Exported gluconolactona 98.6 5.1E-06 1.7E-10 86.8 22.9 140 94-237 84-252 (305)
204 2z2n_A Virginiamycin B lyase; 98.6 0.00011 3.6E-09 74.4 31.7 142 94-242 97-242 (299)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 1E-05 3.4E-10 83.2 23.0 142 93-242 15-194 (314)
206 1yr2_A Prolyl oligopeptidase; 98.5 5.6E-06 1.9E-10 97.7 23.4 145 94-243 161-335 (741)
207 3hrp_A Uncharacterized protein 98.5 1.6E-05 5.6E-10 87.8 25.2 166 69-242 141-340 (409)
208 2qe8_A Uncharacterized protein 98.5 2.1E-05 7.2E-10 83.9 25.2 237 42-310 17-306 (343)
209 3g4e_A Regucalcin; six bladed 98.5 1.7E-05 5.7E-10 82.7 22.8 147 96-246 98-264 (297)
210 2qc5_A Streptogramin B lactona 98.5 0.00027 9.2E-09 71.4 31.1 139 95-239 61-203 (300)
211 2mad_H Methylamine dehydrogena 98.4 0.00013 4.3E-09 79.8 29.3 125 80-211 48-197 (373)
212 3hrp_A Uncharacterized protein 98.3 6.4E-05 2.2E-09 83.0 23.3 143 96-243 131-286 (409)
213 3dr2_A Exported gluconolactona 98.3 4.5E-05 1.6E-09 79.6 20.9 139 96-243 131-296 (305)
214 2mad_H Methylamine dehydrogena 98.3 0.00013 4.3E-09 79.8 24.2 155 78-242 96-337 (373)
215 2ece_A 462AA long hypothetical 98.2 3.2E-05 1.1E-09 87.2 19.5 175 67-243 94-340 (462)
216 2ghs_A AGR_C_1268P; regucalcin 98.2 0.00014 4.9E-09 77.0 23.7 167 70-245 101-293 (326)
217 3iuj_A Prolyl endopeptidase; h 98.2 0.00014 4.8E-09 85.4 25.7 159 79-243 208-390 (693)
218 2qc5_A Streptogramin B lactona 98.2 0.00054 1.9E-08 69.2 26.7 165 70-242 73-247 (300)
219 3sjl_D Methylamine dehydrogena 98.2 6.9E-05 2.4E-09 83.0 21.4 209 78-310 108-347 (386)
220 3c75_H MADH, methylamine dehyd 98.2 7.2E-05 2.5E-09 83.9 20.1 97 79-178 99-218 (426)
221 2qe8_A Uncharacterized protein 98.1 0.00013 4.6E-09 77.6 18.7 147 95-244 119-311 (343)
222 3nok_A Glutaminyl cyclase; bet 98.1 0.00022 7.6E-09 75.2 19.8 169 69-245 65-256 (268)
223 1fwx_A Nitrous oxide reductase 98.0 8.6E-05 2.9E-09 86.3 16.9 171 70-243 102-349 (595)
224 2ece_A 462AA long hypothetical 98.0 0.0002 6.9E-09 80.8 18.8 147 98-245 190-402 (462)
225 3nol_A Glutamine cyclotransfer 98.0 0.00025 8.5E-09 74.6 17.9 160 80-245 66-246 (262)
226 2iwa_A Glutamine cyclotransfer 97.9 0.00046 1.6E-08 72.7 19.3 161 78-245 43-227 (266)
227 3sjl_D Methylamine dehydrogena 97.9 0.00014 4.7E-09 80.6 15.1 111 101-214 38-174 (386)
228 3mbr_X Glutamine cyclotransfer 97.8 0.0011 3.8E-08 69.0 20.4 161 79-245 43-225 (243)
229 2hz6_A Endoplasmic reticulum t 97.7 3.6E-06 1.2E-10 91.5 -1.7 141 68-214 8-154 (369)
230 2iwa_A Glutamine cyclotransfer 97.7 0.004 1.4E-07 65.5 21.6 138 97-242 22-168 (266)
231 1kb0_A Quinohemoprotein alcoho 97.6 0.00067 2.3E-08 80.0 17.0 139 102-243 319-539 (677)
232 1npe_A Nidogen, entactin; glyc 97.6 0.0071 2.4E-07 61.4 22.1 144 97-243 37-186 (267)
233 3nol_A Glutamine cyclotransfer 97.6 0.0043 1.5E-07 65.2 20.1 137 98-242 45-188 (262)
234 3hxj_A Pyrrolo-quinoline quino 97.6 0.0026 8.9E-08 65.5 18.2 131 69-207 107-242 (330)
235 2hz6_A Endoplasmic reticulum t 97.6 2.7E-05 9.2E-10 84.6 3.0 133 106-249 8-144 (369)
236 3c75_H MADH, methylamine dehyd 97.5 0.00046 1.6E-08 77.3 13.1 107 105-214 82-214 (426)
237 2fp8_A Strictosidine synthase; 97.5 0.0085 2.9E-07 62.7 22.0 143 97-242 81-247 (322)
238 3nok_A Glutaminyl cyclase; bet 97.5 0.0026 9E-08 67.0 17.0 138 97-242 56-197 (268)
239 1yiq_A Quinohemoprotein alcoho 97.5 0.0036 1.2E-07 73.9 20.0 135 106-243 315-537 (689)
240 2xe4_A Oligopeptidase B; hydro 97.4 0.0032 1.1E-07 74.9 18.2 185 43-243 175-386 (751)
241 2p4o_A Hypothetical protein; p 97.4 0.17 5.8E-06 52.6 29.4 177 42-237 32-225 (306)
242 1yiq_A Quinohemoprotein alcoho 97.4 0.0041 1.4E-07 73.4 18.5 144 68-213 120-342 (689)
243 1kb0_A Quinohemoprotein alcoho 97.3 0.0052 1.8E-07 72.4 18.6 145 68-213 127-350 (677)
244 4a2l_A BT_4663, two-component 97.3 0.065 2.2E-06 63.5 27.5 171 66-241 364-560 (795)
245 4a2l_A BT_4663, two-component 97.2 0.097 3.3E-06 62.0 28.5 172 67-241 318-515 (795)
246 3mbr_X Glutamine cyclotransfer 97.2 0.09 3.1E-06 54.6 23.8 136 97-240 22-164 (243)
247 3qqz_A Putative uncharacterize 97.1 0.19 6.6E-06 52.3 26.4 148 91-243 22-192 (255)
248 2fp8_A Strictosidine synthase; 97.1 0.05 1.7E-06 56.8 22.2 141 97-243 20-204 (322)
249 1npe_A Nidogen, entactin; glyc 97.1 0.045 1.5E-06 55.4 21.0 155 77-236 99-263 (267)
250 2xe4_A Oligopeptidase B; hydro 97.1 0.0044 1.5E-07 73.7 14.7 143 93-242 170-337 (751)
251 1ijq_A LDL receptor, low-densi 97.1 0.11 3.8E-06 54.8 24.0 162 79-243 10-183 (316)
252 3v65_B Low-density lipoprotein 97.0 0.053 1.8E-06 59.1 21.5 165 76-243 93-265 (386)
253 3hxj_A Pyrrolo-quinoline quino 97.0 0.0099 3.4E-07 61.1 14.7 158 67-236 145-307 (330)
254 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.0056 1.9E-07 65.1 13.0 103 106-213 102-211 (376)
255 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.0068 2.3E-07 64.4 13.5 133 69-206 239-375 (376)
256 3v64_C Agrin; beta propeller, 96.9 0.1 3.5E-06 56.0 22.0 164 77-243 51-222 (349)
257 3v9f_A Two-component system se 96.8 0.35 1.2E-05 57.0 27.7 167 67-241 371-556 (781)
258 1mda_H Methylamine dehydrogena 96.7 0.0029 1E-07 69.4 8.6 89 118-209 47-158 (368)
259 3p5b_L Low density lipoprotein 96.7 0.2 6.7E-06 55.0 23.0 167 73-242 86-264 (400)
260 1kv9_A Type II quinohemoprotei 96.6 0.046 1.6E-06 64.2 17.9 136 105-243 309-520 (668)
261 1fwx_A Nitrous oxide reductase 96.4 0.03 1E-06 65.2 14.7 144 98-244 197-408 (595)
262 3v9f_A Two-component system se 96.4 0.82 2.8E-05 53.9 27.6 169 66-241 320-512 (781)
263 3tc9_A Hypothetical hydrolase; 96.4 0.051 1.7E-06 60.3 15.9 142 97-243 138-289 (430)
264 2ad6_A Methanol dehydrogenase 96.3 0.077 2.6E-06 61.1 17.5 136 105-243 311-526 (571)
265 3tc9_A Hypothetical hydrolase; 96.3 0.081 2.8E-06 58.7 16.7 139 69-209 149-301 (430)
266 3v64_C Agrin; beta propeller, 96.2 0.53 1.8E-05 50.4 22.4 161 76-241 92-261 (349)
267 3amr_A 3-phytase; beta-propell 96.2 0.18 6E-06 55.2 18.5 193 5-208 31-262 (355)
268 1flg_A Protein (quinoprotein e 96.2 0.14 4.7E-06 59.3 18.7 134 105-243 331-548 (582)
269 1mda_H Methylamine dehydrogena 96.1 0.019 6.3E-07 63.0 10.3 87 101-189 269-366 (368)
270 1kv9_A Type II quinohemoprotei 96.1 0.26 8.7E-06 57.8 20.6 144 69-213 117-337 (668)
271 3qqz_A Putative uncharacterize 96.0 0.56 1.9E-05 48.8 20.6 114 93-207 118-251 (255)
272 3v65_B Low-density lipoprotein 96.0 0.42 1.4E-05 51.9 20.6 161 77-242 136-305 (386)
273 4hw6_A Hypothetical protein, I 96.0 0.27 9.2E-06 54.6 19.3 139 69-209 152-304 (433)
274 2p4o_A Hypothetical protein; p 96.0 0.9 3.1E-05 47.0 22.1 141 98-243 119-277 (306)
275 1ijq_A LDL receptor, low-densi 95.9 1.2 4.2E-05 46.6 23.2 115 96-210 77-196 (316)
276 2p9w_A MAL S 1 allergenic prot 95.9 0.14 4.9E-06 55.4 15.7 143 98-243 15-204 (334)
277 1w6s_A Methanol dehydrogenase 95.9 0.15 5.1E-06 59.4 17.0 84 158-243 451-535 (599)
278 3sov_A LRP-6, low-density lipo 95.9 0.29 1E-05 51.9 18.1 163 78-243 12-185 (318)
279 3m0c_C LDL receptor, low-densi 95.8 0.69 2.4E-05 55.6 22.7 165 75-242 400-576 (791)
280 3p5b_L Low density lipoprotein 95.6 1.4 4.9E-05 48.0 23.0 117 95-211 158-279 (400)
281 4a0p_A LRP6, LRP-6, low-densit 95.5 2 6.7E-05 50.2 24.8 163 77-243 13-185 (628)
282 3amr_A 3-phytase; beta-propell 95.4 0.68 2.3E-05 50.6 18.8 171 72-243 43-251 (355)
283 2p9w_A MAL S 1 allergenic prot 95.3 2 6.7E-05 46.6 22.0 112 98-210 65-216 (334)
284 1flg_A Protein (quinoprotein e 95.2 0.046 1.6E-06 63.3 9.6 81 116-198 465-548 (582)
285 3sov_A LRP-6, low-density lipo 95.1 3.1 0.0001 44.0 22.7 115 97-211 80-199 (318)
286 2ad6_A Methanol dehydrogenase 95.0 0.048 1.6E-06 62.9 8.9 81 116-198 443-525 (571)
287 4hw6_A Hypothetical protein, I 95.0 0.32 1.1E-05 54.0 15.2 145 96-243 139-292 (433)
288 3m0c_C LDL receptor, low-densi 94.9 1.6 5.4E-05 52.5 22.0 117 95-211 470-591 (791)
289 3kya_A Putative phosphatase; s 94.9 0.43 1.5E-05 54.4 16.2 146 97-243 140-329 (496)
290 2ism_A Putative oxidoreductase 94.4 1.1 3.9E-05 47.9 17.4 98 97-198 32-153 (352)
291 3s94_A LRP-6, low-density lipo 94.3 4.3 0.00015 47.1 23.3 164 77-243 16-190 (619)
292 2xbg_A YCF48-like protein; pho 94.2 1.9 6.6E-05 45.3 18.5 142 93-243 160-311 (327)
293 3a9g_A Putative uncharacterize 94.1 1.1 3.9E-05 48.1 16.7 143 96-242 29-215 (354)
294 2ism_A Putative oxidoreductase 94.0 7.4 0.00025 41.4 24.5 142 43-197 32-220 (352)
295 2xbg_A YCF48-like protein; pho 93.7 3.5 0.00012 43.4 19.3 144 94-242 120-267 (327)
296 3kya_A Putative phosphatase; s 93.7 0.56 1.9E-05 53.5 13.8 138 70-208 152-340 (496)
297 1cru_A Protein (soluble quinop 93.7 2.6 9E-05 47.0 19.1 103 97-199 28-163 (454)
298 1n7d_A LDL receptor, low-densi 93.6 0.12 4.1E-06 61.2 8.4 163 78-243 385-559 (699)
299 2g8s_A Glucose/sorbosone dehyd 93.5 1.4 4.8E-05 47.2 16.0 143 97-241 19-214 (353)
300 3das_A Putative oxidoreductase 93.1 3 0.0001 45.2 17.9 142 96-238 32-216 (347)
301 4a0p_A LRP6, LRP-6, low-densit 92.9 12 0.00042 43.5 23.8 141 96-242 80-224 (628)
302 3s94_A LRP-6, low-density lipo 92.8 16 0.00054 42.4 24.5 166 75-243 322-498 (619)
303 3sre_A PON1, serum paraoxonase 92.8 6 0.0002 43.0 19.6 141 97-241 113-284 (355)
304 3pbp_A Nucleoporin NUP82; beta 92.5 6.4 0.00022 44.1 19.6 104 105-211 30-160 (452)
305 1k3i_A Galactose oxidase precu 92.4 2.9 9.8E-05 48.4 17.6 94 80-174 220-328 (656)
306 3pbp_A Nucleoporin NUP82; beta 92.3 4.3 0.00015 45.6 17.8 128 67-197 30-197 (452)
307 1k3i_A Galactose oxidase precu 92.1 0.61 2.1E-05 54.1 11.4 111 100-211 190-325 (656)
308 3sre_A PON1, serum paraoxonase 90.6 8.1 0.00028 41.9 17.7 142 96-243 50-240 (355)
309 1n7d_A LDL receptor, low-densi 89.9 0.54 1.8E-05 55.5 8.2 114 97-210 454-572 (699)
310 1w6s_A Methanol dehydrogenase 89.1 2.4 8.4E-05 49.2 12.8 105 107-213 62-195 (599)
311 3ei3_A DNA damage-binding prot 87.8 27 0.00092 43.7 21.7 92 118-211 808-915 (1158)
312 3a9g_A Putative uncharacterize 87.3 33 0.0011 36.5 25.9 143 43-198 30-216 (354)
313 3ott_A Two-component system se 87.0 51 0.0018 38.3 22.7 165 66-241 70-249 (758)
314 1tl2_A L10, protein (tachylect 83.0 16 0.00056 37.5 13.6 138 97-241 42-199 (236)
315 2xzh_A Clathrin heavy chain 1; 81.7 39 0.0013 36.8 16.5 118 117-243 49-171 (365)
316 3das_A Putative oxidoreductase 81.1 12 0.00041 40.4 12.6 110 132-242 26-158 (347)
317 3ott_A Two-component system se 79.4 99 0.0034 35.9 23.2 168 68-241 111-296 (758)
318 1tl2_A L10, protein (tachylect 78.3 17 0.0006 37.3 11.9 99 138-241 41-152 (236)
319 1cru_A Protein (soluble quinop 77.7 23 0.0008 39.3 14.0 104 138-242 27-162 (454)
320 2xzh_A Clathrin heavy chain 1; 77.6 86 0.0029 34.2 22.0 180 22-213 85-294 (365)
321 1bpo_A Protein (clathrin); cla 74.4 52 0.0018 37.2 15.2 118 117-243 48-170 (494)
322 1bpo_A Protein (clathrin); cla 73.9 1.2E+02 0.0042 34.2 23.5 181 22-213 84-293 (494)
323 3s25_A Hypothetical 7-bladed b 71.7 33 0.0011 35.9 12.6 126 101-243 58-203 (302)
324 2wg3_C Hedgehog-interacting pr 69.6 53 0.0018 36.7 14.3 104 97-200 15-159 (463)
325 3ei3_A DNA damage-binding prot 62.2 3.1E+02 0.01 34.3 21.4 107 96-206 514-633 (1158)
326 3ii7_A Kelch-like protein 7; p 62.2 1.2E+02 0.0041 30.4 14.3 102 106-211 55-180 (306)
327 2be1_A Serine/threonine-protei 60.8 8.7 0.0003 41.5 5.5 106 108-213 11-134 (339)
328 2vpj_A Kelch-like protein 12; 60.7 1.1E+02 0.0038 30.5 13.7 101 106-211 159-280 (301)
329 3s25_A Hypothetical 7-bladed b 58.7 1.2E+02 0.0042 31.5 13.8 125 101-242 109-241 (302)
330 3sbq_A Nitrous-oxide reductase 58.4 25 0.00087 40.8 8.9 101 96-198 323-453 (638)
331 2g8s_A Glucose/sorbosone dehyd 57.0 1.9E+02 0.0066 30.3 26.7 101 95-197 65-215 (353)
332 2xn4_A Kelch-like protein 2; s 56.9 1.6E+02 0.0055 29.4 14.8 102 106-211 155-278 (302)
333 3ii7_A Kelch-like protein 7; p 55.1 1.7E+02 0.006 29.2 19.3 102 106-211 101-227 (306)
334 1zgk_A Kelch-like ECH-associat 53.3 1.6E+02 0.0056 29.6 13.6 102 106-211 168-289 (308)
335 4gq2_M Nucleoporin NUP120; bet 51.9 52 0.0018 40.2 10.8 39 96-134 236-274 (950)
336 2vpj_A Kelch-like protein 12; 49.4 2.1E+02 0.0071 28.4 16.6 102 106-211 112-233 (301)
337 1xi4_A Clathrin heavy chain; a 49.2 3.6E+02 0.012 35.0 17.6 147 61-210 68-236 (1630)
338 1yph_C Chymotrypsin A, chain B 45.8 14 0.00048 33.4 3.5 68 666-747 29-108 (131)
339 2zwa_A Leucine carboxyl methyl 45.7 3.8E+02 0.013 31.1 16.6 104 106-211 451-579 (695)
340 4asc_A Kelch repeat and BTB do 45.5 2.5E+02 0.0086 28.2 14.8 102 106-211 148-279 (315)
341 4gq2_M Nucleoporin NUP120; bet 44.4 61 0.0021 39.5 9.8 38 139-177 237-274 (950)
342 2asu_B Hepatocyte growth facto 43.7 9.5 0.00033 38.0 2.2 76 666-748 26-107 (234)
343 3sbq_A Nitrous-oxide reductase 43.4 90 0.0031 36.3 10.2 71 138-209 323-408 (638)
344 1gvz_A Kallikrein-1E2; antigen 42.0 14 0.00049 36.6 3.2 67 666-747 28-117 (237)
345 2woz_A Kelch repeat and BTB do 40.6 3E+02 0.01 27.7 13.8 67 106-174 158-236 (318)
346 1vqy_A Hypothetical protein AG 39.5 13 0.00046 33.6 2.2 22 648-669 10-31 (116)
347 1pyt_D TC, PCPA-TC, chymotryps 37.2 25 0.00086 35.3 4.1 71 666-748 45-127 (251)
348 1euf_A Duodenase; serine prote 36.3 26 0.00089 34.6 4.0 68 666-748 31-110 (227)
349 3mhw_U Urokinase-type plasmino 34.5 28 0.00096 34.4 3.9 72 666-747 33-122 (247)
350 4asc_A Kelch repeat and BTB do 34.3 3.7E+02 0.013 26.9 15.8 104 103-211 42-176 (315)
351 1a7s_A Heparin binding protein 34.0 25 0.00084 34.6 3.4 72 666-747 28-110 (225)
352 2wg3_C Hedgehog-interacting pr 33.5 2.7E+02 0.0091 30.9 12.1 104 138-242 14-157 (463)
353 1xi4_A Clathrin heavy chain; a 31.7 1.6E+02 0.0053 38.1 10.5 119 117-243 48-170 (1630)
354 2be1_A Serine/threonine-protei 31.4 1.8E+02 0.0061 31.1 9.8 65 114-179 64-140 (339)
355 2xn4_A Kelch-like protein 2; s 31.3 4E+02 0.014 26.4 14.8 102 106-211 108-231 (302)
356 1cgh_A Cathepsin G; inflammati 31.2 33 0.0011 33.7 3.8 68 666-748 31-110 (224)
357 3gyl_B Prostasin; ENAC, zymoge 30.9 39 0.0013 33.7 4.3 72 666-747 28-111 (261)
358 1si5_H Scatter factor, hepatoc 30.6 20 0.00067 35.8 2.0 74 666-748 27-106 (240)
359 3rp2_A RAT MAST cell protease 30.3 38 0.0013 32.9 4.1 68 666-748 32-111 (224)
360 4dgj_A Enteropeptidase catalyt 30.2 16 0.00053 36.1 1.2 74 666-747 28-113 (235)
361 2zch_P Prostate-specific antig 29.7 31 0.0011 34.1 3.3 68 666-748 28-118 (237)
362 4fhn_B Nucleoporin NUP120; pro 29.6 38 0.0013 42.1 4.7 38 139-177 239-276 (1139)
363 1pq7_A Trypsin; ultra-high res 29.6 35 0.0012 33.5 3.6 69 666-748 28-106 (224)
364 1elt_A Elastase; serine protei 29.5 22 0.00077 35.1 2.2 71 666-749 32-116 (236)
365 2woz_A Kelch repeat and BTB do 29.4 2.9E+02 0.01 27.7 10.9 102 106-211 109-233 (318)
366 1iau_A Granzyme B; hydrolase-h 29.1 35 0.0012 33.5 3.6 68 666-748 31-110 (227)
367 1orf_A Granzyme A; hydrolase-h 28.9 29 0.00098 34.4 2.9 69 666-748 28-108 (234)
368 1hj8_A Trypsin I; hydrolase, r 28.7 39 0.0013 33.2 3.8 68 666-748 27-106 (222)
369 2bdy_A Thrombin; thrombin, com 28.7 45 0.0015 34.2 4.5 75 666-748 60-151 (289)
370 2xw9_A Complement factor D; im 28.5 47 0.0016 32.5 4.4 71 666-747 28-110 (228)
371 1fuj_A PR3, myeloblastin; hydr 28.2 56 0.0019 31.8 4.9 72 666-748 31-113 (221)
372 3ncl_A Suppressor of tumorigen 27.9 34 0.0011 33.7 3.2 75 666-747 29-118 (241)
373 3rm2_H Thrombin heavy chain; s 27.4 41 0.0014 33.3 3.8 74 666-747 30-120 (259)
374 3f7f_A Nucleoporin NUP120; nuc 27.3 71 0.0024 38.0 6.2 37 139-178 223-259 (729)
375 1ao5_A Glandular kallikrein-13 26.9 33 0.0011 33.9 3.0 16 666-681 28-44 (237)
376 1mza_A Pro-granzyme K; apoptos 26.7 39 0.0013 33.4 3.4 74 666-749 30-115 (240)
377 2zwa_A Leucine carboxyl methyl 26.4 3.5E+02 0.012 31.4 12.0 107 105-211 499-637 (695)
378 1gvk_B Elastase 1, peptide inh 26.4 39 0.0013 33.5 3.4 70 666-748 32-115 (240)
379 3b7f_A Glycosyl hydrolase, BNR 26.1 5.5E+02 0.019 26.7 12.7 109 97-207 116-260 (394)
380 2jde_A Urokinase-type plasmino 26.0 47 0.0016 33.6 3.9 72 666-747 56-145 (276)
381 2uvk_A YJHT; unknown function, 26.0 3.3E+02 0.011 27.8 10.6 99 106-207 65-224 (357)
382 1bru_P Elastase, PPE; serine p 25.7 56 0.0019 32.4 4.4 70 666-748 32-115 (241)
383 1t8o_A Chymotrypsin A; chymotr 25.3 44 0.0015 33.4 3.5 69 666-748 44-124 (245)
384 1ym0_A Fibrinotic enzyme compo 25.1 30 0.001 34.2 2.2 71 666-747 30-112 (238)
385 3fzz_A Granzyme C; hydrolase, 24.9 68 0.0023 31.2 4.8 67 666-747 32-110 (227)
386 3h7t_A Group 3 allergen smipp- 24.8 38 0.0013 33.1 2.9 69 666-748 28-108 (235)
387 1zgk_A Kelch-like ECH-associat 24.6 5.3E+02 0.018 25.7 16.8 101 106-211 121-242 (308)
388 2f91_A Hepatopancreas trypsin; 24.5 48 0.0017 32.7 3.6 74 666-748 32-118 (237)
389 2z7f_E Leukocyte elastase; ser 24.3 37 0.0013 33.2 2.7 72 666-748 28-110 (218)
390 1spj_A Kallikrein 1; serine pr 24.2 46 0.0016 32.8 3.4 68 666-748 28-119 (238)
391 2bz6_H Blood coagulation facto 24.1 36 0.0012 34.0 2.6 73 666-748 28-112 (254)
392 3h7o_A Group 3 allergen smipp- 24.0 31 0.0011 33.6 2.1 71 666-748 30-112 (228)
393 1lo6_A Kallikrein 6, HK6; seri 23.2 52 0.0018 32.3 3.5 67 666-747 28-106 (223)
394 1azz_A Collagenase; complex (s 23.0 29 0.00098 34.3 1.6 70 666-748 28-109 (226)
395 4fhn_B Nucleoporin NUP120; pro 22.9 57 0.0019 40.5 4.5 38 97-134 239-276 (1139)
396 2bdg_A Kallikrein-4; serine pr 22.7 55 0.0019 32.1 3.6 69 666-748 28-108 (223)
397 1ddj_A Plasminogen; catalytic 22.3 53 0.0018 32.7 3.5 73 666-748 46-124 (247)
398 3gov_B MAsp-1; complement, ser 22.0 49 0.0017 32.6 3.1 73 666-747 29-125 (251)
399 4ag1_A Chymase; hydrolase-de n 22.0 68 0.0023 31.2 4.1 67 666-747 32-110 (226)
400 1rtf_B (TC)-T-PA, two chain ti 21.6 51 0.0017 32.7 3.1 74 666-749 34-123 (252)
401 3mfj_A Cationic trypsin; serin 21.6 61 0.0021 31.8 3.7 67 666-747 27-105 (223)
402 4i8h_A Cationic trypsin, beta- 21.4 56 0.0019 31.8 3.3 67 666-747 27-105 (223)
403 3b7f_A Glycosyl hydrolase, BNR 21.0 7.1E+02 0.024 25.8 17.8 70 96-166 55-144 (394)
404 4i8i_A Hypothetical protein; 5 20.5 14 0.00046 38.7 -1.5 21 595-616 199-220 (271)
405 1eq9_A Chymotrypsin; FIRE ANT, 20.4 66 0.0023 31.4 3.6 71 666-749 28-110 (222)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=266.41 Aligned_cols=267 Identities=13% Similarity=0.100 Sum_probs=203.2
Q ss_pred eEeeecccceeeCCCCceeeeEEeeCCCceEeecCCC-c----------------------------------eeecCCc
Q 036953 26 RNVSRLLAHREISPKTKYVPKRQWVDASKLKTCGPSD-S----------------------------------SVRDAKR 70 (792)
Q Consensus 26 r~V~~l~~~rels~~tk~V~s~aWspd~~lla~G~~a-~----------------------------------sv~d~~~ 70 (792)
.+.|+....... .....+.+++|++++++++++... . ..+..+.
T Consensus 16 ~r~w~~~~~~~~-~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 94 (344)
T 4gqb_B 16 AREWNLPPNAPA-CMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER 94 (344)
T ss_dssp -------CCSCS-SCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT
T ss_pred ccccCCCCCCcc-cccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC
Confidence 345665544332 344578999999999887654310 0 0112345
Q ss_pred EEEEEeCCCeEEEEeccCCC--------cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEE
Q 036953 71 GLVSWVEAESLRHLSAKYCP--------LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWV 142 (792)
Q Consensus 71 ~L~S~s~d~sIrvWd~~t~~--------L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~Vts 142 (792)
.+++++.|++|++||..+++ +.+|.+.|++++|+|++++|++|+.|++|+|||+.+++++..+.+|.+.|++
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTC 174 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEE
Confidence 78899999999999998663 3489999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---cCCCeeEEEEcCC-CcEEEEEc-CCeEEEEECCCCCcccCCe
Q 036953 143 VRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD---FYRPIASIAFHAE-GELLAVAS-GHKLYIWPYNNKEEASSPI 217 (792)
Q Consensus 143 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~---h~s~V~sVafSpd-G~~LasgS-dd~V~IWDlrt~~~~~~~~ 217 (792)
++|++++..+|++++.|++|++||+++++++..+. +...+.+++|+|+ +++|++++ ++.|+|||+++++.. .
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~---~ 251 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV---L 251 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC---E
T ss_pred EEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE---E
Confidence 99999555789999999999999999999888773 4567999999985 56888888 556999999988754 3
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe-eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCce
Q 036953 218 IVLKTRRSLRAVHFHPHAAPFVLTAE-VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFL 296 (792)
Q Consensus 218 ~~~~h~~sVtsVafSPdG~~LlaS~s-~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~ 296 (792)
.+..|...|++++|+|++..++++++ +..| .+|+...+.... +.+|...
T Consensus 252 ~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i-----------------------~vwd~~~~~~~~-------~~~H~~~ 301 (344)
T 4gqb_B 252 SSAVHSQCVTGLVFSPHSVPFLASLSEDCSL-----------------------AVLDSSLSELFR-------SQAHRDF 301 (344)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEETTSCE-----------------------EEECTTCCEEEE-------ECCCSSC
T ss_pred EEcCCCCCEEEEEEccCCCeEEEEEeCCCeE-----------------------EEEECCCCcEEE-------EcCCCCC
Confidence 56779999999999999976555554 4433 344444443322 2459999
Q ss_pred EEEeEECCCCc-EEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 297 IVPSVSIDDSR-IDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 297 VwdV~~SpDGr-~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
|++++|+|+|+ +|+ ++++|++|.-|++-.+
T Consensus 302 V~~v~~sp~~~~lla--------------------------s~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 302 VRDATWSPLNHSLLT--------------------------TVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEEECSSSTTEEE--------------------------EEETTSCEEEEECCC-
T ss_pred EEEEEEeCCCCeEEE--------------------------EEcCCCeEEEEECCCC
Confidence 99999999987 555 7899999999987544
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=1.2e-27 Score=262.83 Aligned_cols=266 Identities=17% Similarity=0.240 Sum_probs=210.0
Q ss_pred CCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEE
Q 036953 38 SPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLAST 113 (792)
Q Consensus 38 s~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSG 113 (792)
..+...+.++.|+|++. .+++++.|++|++||..++ .+.+|.+.|.+++|+|++++|++|
T Consensus 105 ~gh~~~V~~~~~~p~~~----------------~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sg 168 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFS----------------VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 168 (410)
T ss_dssp ECCSSCEEEEEECSSSS----------------EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred cccCCcEEEEEEcCCCC----------------EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEE
Confidence 34455666777766654 4566788999999998866 467899999999999999999999
Q ss_pred ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCc
Q 036953 114 HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGE 192 (792)
Q Consensus 114 S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~ 192 (792)
+.|++|+|||+.+++++..+.+|...|.+++|+| ++++|++++.|++|++||+++++++..+ .|...|.++.|+++++
T Consensus 169 s~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247 (410)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred eCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC
Confidence 9999999999999999999999999999999999 8999999999999999999999998888 5888999999999999
Q ss_pred EEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccC--------------------CCeEEEEEeeCccccCC
Q 036953 193 LLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPH--------------------AAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 193 ~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPd--------------------G~~LlaS~s~~dLrs~d 251 (792)
+|++++. +.|++||+++.+.. .....|...|.+++|+|+ +.++++++.+..++.|+
T Consensus 248 ~l~s~s~D~~v~vwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd 324 (410)
T 1vyh_C 248 LIASCSNDQTVRVWVVATKECK---AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324 (410)
T ss_dssp EEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcee---eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEE
Confidence 9999984 55999999887643 245678899999999997 45566665555555444
Q ss_pred C-----ceeeecCCC---cccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEEEccccccC
Q 036953 252 S-----SMTRATSPG---YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRAS 318 (792)
Q Consensus 252 ~-----~~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~ 318 (792)
. ...+....+ ...+.+...+++.+..+..+.++. ....+.+|...|++++|+|+|.+|+
T Consensus 325 ~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-------- 396 (410)
T 1vyh_C 325 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-------- 396 (410)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE--------
T ss_pred CCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE--------
Confidence 2 223332222 223444444444555555555554 1235567999999999999999998
Q ss_pred CCCccccccccccccCCCCCccccccccccc
Q 036953 319 SSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 319 Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
+++.|++|.-|+.
T Consensus 397 ------------------sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 397 ------------------TGSVDQTVKVWEC 409 (410)
T ss_dssp ------------------EEETTSEEEEEC-
T ss_pred ------------------EEeCCCcEEEEeC
Confidence 8899999998874
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=2.2e-27 Score=252.54 Aligned_cols=282 Identities=15% Similarity=0.168 Sum_probs=215.6
Q ss_pred ceEeeecccceeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCe
Q 036953 25 ARNVSRLLAHREISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRST 98 (792)
Q Consensus 25 ~r~V~~l~~~rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V 98 (792)
..+.|.... +....+...+.+++|++++. ..+..+++++.|+++++|+.... .+.+|...|
T Consensus 17 ~~~~~g~~~-~~~~~H~~~V~~v~~~~~~~------------~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v 83 (321)
T 3ow8_A 17 GTNQYGILF-KQEQAHDDAIWSVAWGTNKK------------ENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGV 83 (321)
T ss_dssp ----CEEEE-EETTSSSSCEEEEEEC-------------------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred hhhhhhhee-eecccCCCcEEEEEEecCCC------------CCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCE
Confidence 344444433 33446778999999988743 22446788899999999987644 367999999
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-
Q 036953 99 IAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD- 177 (792)
Q Consensus 99 ~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~- 177 (792)
.+++|++++..+++++.|++|+|||+.+++++..+..|...+.+++|+| ++++|++++.|++|++||+++++....+.
T Consensus 84 ~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~ 162 (321)
T 3ow8_A 84 VSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDT 162 (321)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecC
Confidence 9999999999999999999999999999999999999999999999999 99999999999999999999998887774
Q ss_pred cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc---
Q 036953 178 FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS--- 253 (792)
Q Consensus 178 h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~--- 253 (792)
+...+.+++|+|++++|++++ ++.|++||+++++... ....|...|++++|+|+++.|++++.+..++.|+..
T Consensus 163 ~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 163 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred CCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 678899999999999999998 4559999998877432 455688899999999999977777665555544432
Q ss_pred --eeeecCCC---cccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEEEccccccCCCCcc
Q 036953 254 --MTRATSPG---YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQ 323 (792)
Q Consensus 254 --~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~ 323 (792)
..+..... ...|.+....++.+..+..+.++. ....+.+|...|++++|+|+|+.|+
T Consensus 240 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~------------- 306 (321)
T 3ow8_A 240 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV------------- 306 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-------------
T ss_pred eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-------------
Confidence 22222222 233444444444445444555544 1234567999999999999999999
Q ss_pred ccccccccccCCCCCccccccccccc
Q 036953 324 IEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 324 ~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
+++.|++|.-||.
T Consensus 307 -------------s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 307 -------------SVGDDQEIHIYDC 319 (321)
T ss_dssp -------------EEETTCCEEEEEC
T ss_pred -------------EEeCCCeEEEEeC
Confidence 7888999988883
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=9.3e-27 Score=268.85 Aligned_cols=211 Identities=15% Similarity=0.205 Sum_probs=164.7
Q ss_pred CCCceEeeecccc-----eeeCCCCceeeeEEeeCCCceEeecCCC----cee--e-----------------------c
Q 036953 22 RRRARNVSRLLAH-----REISPKTKYVPKRQWVDASKLKTCGPSD----SSV--R-----------------------D 67 (792)
Q Consensus 22 ~s~~r~V~~l~~~-----rels~~tk~V~s~aWspd~~lla~G~~a----~sv--~-----------------------d 67 (792)
..+.+++|+.... ..+..+...+..++|+|+++.++++... ..+ + +
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~ 158 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPS 158 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSS
T ss_pred CCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCC
Confidence 4567899987432 2344567789999999999886543221 011 1 1
Q ss_pred CCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec-------CC
Q 036953 68 AKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS-------GH 136 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~-------gH 136 (792)
+...+++++.|+++++|+.... .+.+|.+.|.+++|+||+++|++++.|++|+|||+.+++++..+. +|
T Consensus 159 ~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 159 RPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAH 238 (611)
T ss_dssp SSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSS
T ss_pred CCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccccccc
Confidence 2236999999999999998754 467999999999999999999999999999999999999988884 79
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe----------------------------------------
Q 036953 137 RRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC---------------------------------------- 176 (792)
Q Consensus 137 ~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~---------------------------------------- 176 (792)
.+.|.+++|+| ++++|++++.|++|++||+++++++..+
T Consensus 239 ~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~ 317 (611)
T 1nr0_A 239 SGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSID 317 (611)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEE
T ss_pred CCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcc
Confidence 99999999999 9999999999999999999987655432
Q ss_pred ----ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCC
Q 036953 177 ----DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHA 235 (792)
Q Consensus 177 ----~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG 235 (792)
.|...|.+++|+|+|++|++++ |+.|++||+.+++.... ....|...|.+++|++++
T Consensus 318 ~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~--~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 318 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV--FPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC--SSCSCSSCEEEEEECTTS
T ss_pred eEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee--cccCCcceEEEEEECCCC
Confidence 3677899999999999999999 45599999987653220 012344555555555443
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=1.8e-27 Score=256.95 Aligned_cols=270 Identities=14% Similarity=0.092 Sum_probs=200.0
Q ss_pred CCceEeeecccceeeCCCCceeeeEEeeCCCceEeecCCC------cee-----------------------------ec
Q 036953 23 RRARNVSRLLAHREISPKTKYVPKRQWVDASKLKTCGPSD------SSV-----------------------------RD 67 (792)
Q Consensus 23 s~~r~V~~l~~~rels~~tk~V~s~aWspd~~lla~G~~a------~sv-----------------------------~d 67 (792)
......|+++.... ..+...+.+++|+|+|++++++..+ ..+ +.
T Consensus 25 ~~~~~~w~~p~~~p-~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s 103 (357)
T 4g56_B 25 SSKGSAWGRPVTAP-ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWV 103 (357)
T ss_dssp ----------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEE
T ss_pred CccccccCCCCCCc-ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEc
Confidence 34456677655432 3466789999999999998776431 111 11
Q ss_pred CCcEEEEEeCCCeEEEEeccCCC--------cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCC
Q 036953 68 AKRGLVSWVEAESLRHLSAKYCP--------LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRT 139 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~~--------L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~ 139 (792)
.+..+++++.+++|++||..+++ ..+|...|++++|+|++++|++|+.|++|+|||+.+++++..+.+|...
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~ 183 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE 183 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC
Confidence 23457788899999999987552 2479999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe---ccCCCeeEEEEcCCC-cEEEEEc-CCeEEEEECCCCCccc
Q 036953 140 PWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC---DFYRPIASIAFHAEG-ELLAVAS-GHKLYIWPYNNKEEAS 214 (792)
Q Consensus 140 VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~---~h~s~V~sVafSpdG-~~LasgS-dd~V~IWDlrt~~~~~ 214 (792)
|++++|++++..++++++.|++|++||+++++++..+ .+...+.+++|+|++ .+|++++ ++.|++||+++.+..
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~- 262 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA- 262 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC-
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe-
Confidence 9999999944568999999999999999998877665 356789999999985 6788887 455999999987754
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe-eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCC
Q 036953 215 SPIIVLKTRRSLRAVHFHPHAAPFVLTAE-VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSL 293 (792)
Q Consensus 215 ~~~~~~~h~~sVtsVafSPdG~~LlaS~s-~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh 293 (792)
.....|...|++++|+|++..++++++ +.. +.+|+...+...... +|
T Consensus 263 --~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-----------------------i~iwd~~~~~~~~~~-------~H 310 (357)
T 4g56_B 263 --QTSAVHSQNITGLAYSYHSSPFLASISEDCT-----------------------VAVLDADFSEVFRDL-------SH 310 (357)
T ss_dssp --EEECCCSSCEEEEEECSSSSCCEEEEETTSC-----------------------EEEECTTSCEEEEEC-------CC
T ss_pred --EEEeccceeEEEEEEcCCCCCEEEEEeCCCE-----------------------EEEEECCCCcEeEEC-------CC
Confidence 355678899999999999876665554 333 344444444433322 48
Q ss_pred CceEEEeEECC-CCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 294 PFLIVPSVSID-DSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 294 ~~~VwdV~~Sp-DGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
...|.+++|+| ||++|+ ++++|++|.-|++...
T Consensus 311 ~~~V~~vafsP~d~~~l~--------------------------s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFT--------------------------TVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSCEEEEEECSSSTTEEE--------------------------EEETTSCEEEEECC--
T ss_pred CCCEEEEEEeCCCCCEEE--------------------------EEcCCCeEEEEECCCC
Confidence 99999999998 899999 8999999999997543
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=6e-27 Score=249.76 Aligned_cols=268 Identities=15% Similarity=0.178 Sum_probs=212.6
Q ss_pred ceeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCE
Q 036953 34 HREISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRT 109 (792)
Q Consensus 34 ~rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~ 109 (792)
.+.+..+...+..+.|++++++ +++++.|++|++|+..++ .+..|...|.+++|+|++++
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~----------------l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 111 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRL----------------LLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSE----------------EEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSE
T ss_pred heeecCCCCceEEEEECCCCCE----------------EEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCE
Confidence 4556677788999999988764 455578899999998765 34678999999999999999
Q ss_pred EEEEECCCeEEEEECCCC----cEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeE
Q 036953 110 LASTHGDHTVKIIDCQTG----NCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIAS 184 (792)
Q Consensus 110 LaSGS~DGtVrIWDl~tg----k~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~s 184 (792)
|++|+.|+.|++||+.++ +....+.+|.+.|.++.|++ ++ .+++++.|++|++||+++++++..+. |...|.+
T Consensus 112 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~ 189 (340)
T 1got_B 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMS 189 (340)
T ss_dssp EEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEE
Confidence 999999999999999875 35677889999999999998 54 58999999999999999999988884 8899999
Q ss_pred EEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----eeeec
Q 036953 185 IAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTRAT 258 (792)
Q Consensus 185 VafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l~t 258 (792)
++|+|++++|++++ ++.|++||+++++... ....|...|++++|+|+++.|++++.+..++.|+.. ..+..
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~---~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 266 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQ---TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEE---EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc
Confidence 99999999999998 5559999998876432 456688999999999999988887776666655533 11111
Q ss_pred CC---C--cccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccc
Q 036953 259 SP---G--YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSA 328 (792)
Q Consensus 259 ~s---g--~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~ 328 (792)
.. + ...|.+....++.+..+..+.++. ....+.+|...|++++|+|||++|+
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~------------------ 328 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA------------------ 328 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEE------------------
T ss_pred CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEE------------------
Confidence 11 0 233444555555555555555554 1235678999999999999999999
Q ss_pred cccccCCCCCcccccccccc
Q 036953 329 SLHLQSDSNVEQDGTVPSME 348 (792)
Q Consensus 329 ~~q~~~~~sgs~D~tv~p~~ 348 (792)
+++.|++|.-|+
T Consensus 329 --------s~s~D~~i~iWd 340 (340)
T 1got_B 329 --------TGSWDSFLKIWN 340 (340)
T ss_dssp --------EEETTSCEEEEC
T ss_pred --------EEcCCccEEecC
Confidence 788999988875
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=2.4e-27 Score=253.68 Aligned_cols=275 Identities=17% Similarity=0.184 Sum_probs=200.9
Q ss_pred eCCCCc-eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC-------cCCCCCCeEEEEEcCCCC
Q 036953 37 ISPKTK-YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP-------LVPPPRSTIAAAFSPDGR 108 (792)
Q Consensus 37 ls~~tk-~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~-------L~gH~~~V~sLafSPDG~ 108 (792)
+..+.. .+..++|+|++++++++ +.|++|++|+...+. ..+|...|.+++|+|+++
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~----------------~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~ 74 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASC----------------GGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN 74 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEE----------------ETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS
T ss_pred ecCCCCCcEEEEEECCCCCEEEEE----------------cCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC
Confidence 334444 78899999998755444 667777888765431 368999999999999999
Q ss_pred EEEEEECCCeEEEEECCCC--cEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc---EEEEe-ccCCCe
Q 036953 109 TLASTHGDHTVKIIDCQTG--NCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSE---CIGSC-DFYRPI 182 (792)
Q Consensus 109 ~LaSGS~DGtVrIWDl~tg--k~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~---~v~t~-~h~s~V 182 (792)
+|++|+.|++|+|||+..+ +++..+.+|...|.+++|+| ++++|++++.|++|++||+++++ ++..+ .|...|
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV 153 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE
T ss_pred EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe
Confidence 9999999999999999876 46788999999999999999 99999999999999999998764 34444 488899
Q ss_pred eEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCce-------
Q 036953 183 ASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSM------- 254 (792)
Q Consensus 183 ~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~------- 254 (792)
.+++|+|++++|++++. +.|++||.+..+... ......|...|++++|+|++++|++++.+..++.|+...
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~-~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREEEDDWVC-CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEETTEEEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE-EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence 99999999999999994 559999997765321 234567899999999999999888877776666654211
Q ss_pred ----------eeecCCC-------cccCCCCceEEEEecCCCEEEEeecc--------------CcccCCCceEEEeEEC
Q 036953 255 ----------TRATSPG-------YLRYPPPAVFVANAQSGDHVSLAAEL--------------PLMSSLPFLIVPSVSI 303 (792)
Q Consensus 255 ----------~l~t~sg-------~~~~p~~~~~l~~~ssG~~~~l~s~l--------------~~l~gh~~~VwdV~~S 303 (792)
.+.+..+ ...|.+....++.+..+..+.++... ....+|...|.+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 0001111 11222222223333333333333210 1234688888888888
Q ss_pred CCC-cEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCCCC
Q 036953 304 DDS-RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIPP 355 (792)
Q Consensus 304 pDG-r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p~ 355 (792)
|++ .+|+ +++.|++|.-|+.....+.
T Consensus 313 p~~~~~la--------------------------S~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 313 PKEPGLLA--------------------------SCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp SSSTTEEE--------------------------EEETTSCEEEEEECC----
T ss_pred CCCceEEE--------------------------EcCCCCcEEEEEecCCCCc
Confidence 887 4777 8999999999998887654
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=7.7e-27 Score=245.10 Aligned_cols=246 Identities=13% Similarity=0.165 Sum_probs=200.2
Q ss_pred ceeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCE
Q 036953 34 HREISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRT 109 (792)
Q Consensus 34 ~rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~ 109 (792)
++.+..+...+..++|+|++.++ ++++.|+++++|+..++ .+..|...|.+++|+|++++
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l----------------~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 69 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWV----------------LTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNW 69 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEE----------------EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTE
T ss_pred EEeecCCCCceEEEEECCCCCEE----------------EEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCE
Confidence 44555667789999999997754 44577899999998765 35689999999999999999
Q ss_pred EEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE-EEEe-ccCCCeeEEEE
Q 036953 110 LASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC-IGSC-DFYRPIASIAF 187 (792)
Q Consensus 110 LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~-v~t~-~h~s~V~sVaf 187 (792)
|++|+.|++|++||+.+++++..+.+|.+.|++++|+| ++++|++|+.|++|++||++++.. ...+ .|...|.+++|
T Consensus 70 l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEE
Confidence 99999999999999999999999999999999999999 899999999999999999998744 4445 58899999999
Q ss_pred cC-CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc--CCCeEEEEEeeCccccCCCceeeecCCCcc
Q 036953 188 HA-EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP--HAAPFVLTAEVNDLDSSDSSMTRATSPGYL 263 (792)
Q Consensus 188 Sp-dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP--dG~~LlaS~s~~dLrs~d~~~~l~t~sg~~ 263 (792)
+| ++.+|++++ |+.|++||++...... .....+...+..++|+| ++.++++++.+.
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~------------------ 208 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPDKPYMITASDDL------------------ 208 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCEEEEEECCSTTCCEEEEEETTS------------------
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccc--eeccCCcCcEEEEEEEEcCCCCEEEEEcCCC------------------
Confidence 99 678999998 5569999998766432 22334667899999987 566666555444
Q ss_pred cCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccc
Q 036953 264 RYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGT 343 (792)
Q Consensus 264 ~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~t 343 (792)
.+.+|+..++.++.. +.+|...|..+.|+|++++|+ +++.|++
T Consensus 209 -----~i~iWd~~~~~~~~~------~~~h~~~v~~~~~~p~~~~l~--------------------------s~s~Dg~ 251 (304)
T 2ynn_A 209 -----TIKIWDYQTKSCVAT------LEGHMSNVSFAVFHPTLPIII--------------------------SGSEDGT 251 (304)
T ss_dssp -----EEEEEETTTTEEEEE------EECCSSCEEEEEECSSSSEEE--------------------------EEETTSC
T ss_pred -----eEEEEeCCCCcccee------eCCCCCCEEEEEECCCCCEEE--------------------------EEcCCCe
Confidence 344555555544333 345999999999999999999 8999999
Q ss_pred cccccccCCC
Q 036953 344 VPSMETFPVI 353 (792)
Q Consensus 344 v~p~~~~~~~ 353 (792)
|.-||...++
T Consensus 252 i~iWd~~~~~ 261 (304)
T 2ynn_A 252 LKIWNSSTYK 261 (304)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCc
Confidence 9999977663
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=8.7e-27 Score=246.73 Aligned_cols=272 Identities=12% Similarity=0.146 Sum_probs=205.8
Q ss_pred eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC---------CCcCCCCCCeEEEEEcC
Q 036953 35 REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY---------CPLVPPPRSTIAAAFSP 105 (792)
Q Consensus 35 rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t---------~~L~gH~~~V~sLafSP 105 (792)
..+..+...+.+++|++++ ...+++++.|++|++|+... ..+.+|...|.+++|+|
T Consensus 11 ~~l~gH~~~V~~l~~~~~~---------------~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 75 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQ---------------PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75 (319)
T ss_dssp EEECCCSSCEEEEEECSSC---------------TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT
T ss_pred EEEccccceEEEEEccCCC---------------ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC
Confidence 3566777888888888753 22556678888999998642 14679999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEE
Q 036953 106 DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASI 185 (792)
Q Consensus 106 DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sV 185 (792)
++++|++|+.|++|+|||+.+++++..+.+|...|.+++|+| ++++|++++.|++|++||++.........|...+.++
T Consensus 76 dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQV 154 (319)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEE
Confidence 999999999999999999999999999999999999999999 9999999999999999999765444444689999999
Q ss_pred EEcCCC------cEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----
Q 036953 186 AFHAEG------ELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS----- 253 (792)
Q Consensus 186 afSpdG------~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~----- 253 (792)
.|+|.. .+|++++. +.|++||+++.+.. .....|...|++++|+|++++|++++.+..++.|+..
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE---ADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEETTTTEEE---EEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh---eeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999854 47888884 55999999887643 3456789999999999999988887776655555432
Q ss_pred eeeecCCC--cccCCCCceEEEEecCCCEEEEee-c-----------c-CcccCCCceEEEeEECCCCcEEEEccccccC
Q 036953 254 MTRATSPG--YLRYPPPAVFVANAQSGDHVSLAA-E-----------L-PLMSSLPFLIVPSVSIDDSRIDLQHASRRAS 318 (792)
Q Consensus 254 ~~l~t~sg--~~~~p~~~~~l~~~ssG~~~~l~s-~-----------l-~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~ 318 (792)
..+..... ...|.+....++....+. +.++. . . .....|...+++++|+|||++|+
T Consensus 232 ~~~~~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-------- 302 (319)
T 3frx_A 232 YTLSAQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLF-------- 302 (319)
T ss_dssp EEEECCSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEE--------
T ss_pred EEecCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEE--------
Confidence 22222111 233444444444433322 22221 0 0 11233567899999999999999
Q ss_pred CCCccccccccccccCCCCCccccccccccccCC
Q 036953 319 SSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 319 Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+|+.|++|.-|++..+
T Consensus 303 ------------------sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 303 ------------------AGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ------------------EEETTSCEEEEEEEEC
T ss_pred ------------------EeecCceEEEEEEeec
Confidence 8999999999997653
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=8.9e-27 Score=250.89 Aligned_cols=262 Identities=14% Similarity=0.173 Sum_probs=210.9
Q ss_pred cccceeeCCCCceeeeEEeeCCCceEeecCCCceeecC--------------------------CcEEEEEeCCCeEEEE
Q 036953 31 LLAHREISPKTKYVPKRQWVDASKLKTCGPSDSSVRDA--------------------------KRGLVSWVEAESLRHL 84 (792)
Q Consensus 31 l~~~rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~--------------------------~~~L~S~s~d~sIrvW 84 (792)
+...+.+..+...+.+++|++++.+++++..+..+..+ +..+++++.|+.+++|
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 44556777888899999999999888777665544222 2356777889999999
Q ss_pred eccCC----------CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccC-CCCEE
Q 036953 85 SAKYC----------PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPL-RSEIL 153 (792)
Q Consensus 85 d~~t~----------~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~-dg~lL 153 (792)
+.... .+.+|...|.+++|+|+++.|++++.|++|++||+.+++++..+.+|...|.+++|+|. ++++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 87532 34579999999999999999999999999999999999999999999999999999883 45899
Q ss_pred EEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEE
Q 036953 154 ASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHF 231 (792)
Q Consensus 154 aSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVaf 231 (792)
++|+.|++|++||+++++++..+. |...|.+++|+|++++|++++. +.|++||++..+... ......+...+++++|
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~-~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA-IYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCTTCCSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-EEcCCCcccceeEEEE
Confidence 999999999999999999998884 8899999999999999999995 559999998876432 0011123457899999
Q ss_pred ccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEE
Q 036953 232 HPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 232 SPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~ 311 (792)
+|+++.+++++.+.. +.+|+..++..+.. +.+|...|++++|+|||++|+
T Consensus 293 s~~g~~l~~g~~d~~-----------------------i~vwd~~~~~~~~~------l~~h~~~v~~l~~spdg~~l~- 342 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYT-----------------------INVWDVLKGSRVSI------LFGHENRVSTLRVSPDGTAFC- 342 (354)
T ss_dssp CTTSSEEEEEETTSC-----------------------EEEEETTTCSEEEE------ECCCSSCEEEEEECTTSSCEE-
T ss_pred eCCCCEEEEEECCCc-----------------------EEEEECCCCceEEE------EECCCCcEEEEEECCCCCEEE-
Confidence 999997777665443 44555555554332 345999999999999999999
Q ss_pred ccccccCCCCccccccccccccCCCCCcccccccccc
Q 036953 312 HASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSME 348 (792)
Q Consensus 312 ~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~ 348 (792)
+++.|++|.-|+
T Consensus 343 -------------------------sgs~D~~v~vW~ 354 (354)
T 2pbi_B 343 -------------------------SGSWDHTLRVWA 354 (354)
T ss_dssp -------------------------EEETTSEEEEEC
T ss_pred -------------------------EEcCCCCEEecC
Confidence 788899888775
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=8.1e-26 Score=235.68 Aligned_cols=256 Identities=20% Similarity=0.335 Sum_probs=198.3
Q ss_pred eeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEE
Q 036953 36 EISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLA 111 (792)
Q Consensus 36 els~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~La 111 (792)
.+..+...+.+++|+|+++++ ++++.|+.+++|+...+ .+.+|...|.+++|+|++++|+
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l----------------~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 81 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWL----------------ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 81 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEE----------------EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEcccCCcEEEEEECCCCCEE----------------EEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEE
Confidence 344667789999999987654 44567888888887655 3578999999999999999999
Q ss_pred EEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCC
Q 036953 112 STHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAE 190 (792)
Q Consensus 112 SGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpd 190 (792)
+++.|+.|++||+.+++++..+.+|...|.+++|+| ++++|++++.|++|++||+++++++..+. |...|.+++|+|+
T Consensus 82 s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 82 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999 99999999999999999999999888884 7889999999999
Q ss_pred CcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----eeeecCCC---
Q 036953 191 GELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTRATSPG--- 261 (792)
Q Consensus 191 G~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l~t~sg--- 261 (792)
+++|++++ ++.|++||+++.+... .....+...+..++|+|+++++++++.+..++.++.. ..+.....
T Consensus 161 ~~~l~~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 238 (312)
T 4ery_A 161 GSLIVSSSYDGLCRIWDTASGQCLK--TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 238 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEE--EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSS
T ss_pred CCEEEEEeCCCcEEEEECCCCceee--EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceE
Confidence 99999998 4559999998876432 1223456789999999999988887775555544432 12221111
Q ss_pred --cccC-CCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEE
Q 036953 262 --YLRY-PPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 262 --~~~~-p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
...+ +.....++.+..+..+.++. -...+.+|...|+.++++|++++++
T Consensus 239 ~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 295 (312)
T 4ery_A 239 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 295 (312)
T ss_dssp CCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred EEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceE
Confidence 0111 12233344444444444443 1234567999999999999999998
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=1.2e-25 Score=239.54 Aligned_cols=276 Identities=13% Similarity=0.115 Sum_probs=204.8
Q ss_pred eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC-----------CcCCCCCCeEEEEE
Q 036953 35 REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC-----------PLVPPPRSTIAAAF 103 (792)
Q Consensus 35 rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-----------~L~gH~~~V~sLaf 103 (792)
..+..++..+.++.|..... ....+..|++++.|++|++|+.... .+.+|...|.+++|
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~----------~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~ 84 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQK----------ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL 84 (343)
T ss_dssp EEEECCSSCEEEEEECCCSS----------TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE
T ss_pred eeeccchhhhhheeeEEEee----------cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE
Confidence 34556777888888733211 0013446788889999999997532 36799999999999
Q ss_pred cCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe---ccCC
Q 036953 104 SPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC---DFYR 180 (792)
Q Consensus 104 SPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~---~h~s 180 (792)
+|++++|++|+.|++|+|||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||+......... .|..
T Consensus 85 ~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 85 SQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163 (343)
T ss_dssp CSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc
Confidence 99999999999999999999999999999999999999999999 9999999999999999999854333332 4778
Q ss_pred CeeEEEEcCCC----------cEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCcccc
Q 036953 181 PIASIAFHAEG----------ELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDS 249 (792)
Q Consensus 181 ~V~sVafSpdG----------~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs 249 (792)
.|.+++|+|++ .+|++++ ++.|++||.+. +. ......|...|++++|+|+|++|++++.+..++.
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~---~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QI---RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLI 239 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EE---EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ce---eEEEcCccccceEEEECCCCCEEEEEcCCCeEEE
Confidence 89999999987 6888888 55699999432 21 2345678899999999999998888777655554
Q ss_pred CCCc------eeeecCC--CcccCCCCceEEEEecCCCEEEEee-cc----C--c-----------ccCCCceEEEeEEC
Q 036953 250 SDSS------MTRATSP--GYLRYPPPAVFVANAQSGDHVSLAA-EL----P--L-----------MSSLPFLIVPSVSI 303 (792)
Q Consensus 250 ~d~~------~~l~t~s--g~~~~p~~~~~l~~~ssG~~~~l~s-~l----~--~-----------l~gh~~~VwdV~~S 303 (792)
|+.. ..+.... ....|.+....++...++.. .++. .. . . ..+|...|++++|+
T Consensus 240 wd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v-~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 240 WDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGV-KIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp EESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCE-EEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred EECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCE-EEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 4431 1111111 12334444455555544443 3332 10 0 1 12688899999999
Q ss_pred CCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 304 DDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 304 pDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
|+|++|+ +|+.|++|.-|+.-.+
T Consensus 319 p~g~~l~--------------------------sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 319 ALGKKLF--------------------------AGFTDGVIRTFSFETS 341 (343)
T ss_dssp SSSCCEE--------------------------EEETTSEEEEEEEEEE
T ss_pred CCCCeEE--------------------------EecCCceEEEEEEEcc
Confidence 9999999 7889999999986544
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=1.6e-25 Score=258.47 Aligned_cols=227 Identities=14% Similarity=0.183 Sum_probs=181.0
Q ss_pred CceEeeeccc---ceeeCCCCceeeeEEeeCCCceEeecCCCcee--ecC--------------------------CcEE
Q 036953 24 RARNVSRLLA---HREISPKTKYVPKRQWVDASKLKTCGPSDSSV--RDA--------------------------KRGL 72 (792)
Q Consensus 24 ~~r~V~~l~~---~rels~~tk~V~s~aWspd~~lla~G~~a~sv--~d~--------------------------~~~L 72 (792)
+.+.+|+... .+.+..+...+..++|+|+++++++|..+..+ |+- +..+
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l 118 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRI 118 (611)
T ss_dssp TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEE
T ss_pred CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEE
Confidence 4677888753 33455677889999999999998888655443 221 1123
Q ss_pred EEEeCC----CeEEEEeccC--CCcCCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEE
Q 036953 73 VSWVEA----ESLRHLSAKY--CPLVPPPRSTIAAAFSPDGR-TLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRF 145 (792)
Q Consensus 73 ~S~s~d----~sIrvWd~~t--~~L~gH~~~V~sLafSPDG~-~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVaf 145 (792)
++++.+ +.+++|+... ..+.+|.+.|++++|+|++. .|++|+.|++|++||..+++++..+.+|...|++++|
T Consensus 119 ~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~f 198 (611)
T 1nr0_A 119 AAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRY 198 (611)
T ss_dssp EEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEE
T ss_pred EEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEE
Confidence 333333 3677777532 35789999999999999886 6999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccC-
Q 036953 146 HPLRSEILASGSLDHEVRLWDANTSECIGSC--------DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASS- 215 (792)
Q Consensus 146 SP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--------~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~- 215 (792)
+| ++++|++++.|++|++||+.+++++..+ .|...|.+++|+|++++|++++ |+.|++||+++++....
T Consensus 199 sp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 199 NP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 99 9999999999999999999999988877 5889999999999999999999 45599999987653210
Q ss_pred ---------------------------------------CeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 216 ---------------------------------------PIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 216 ---------------------------------------~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
.....+|...|++++|+|+|++|++++.+..++.|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 278 PVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp ECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 012235888999999999999888877766665544
No 14
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=2.4e-25 Score=274.44 Aligned_cols=274 Identities=21% Similarity=0.250 Sum_probs=205.7
Q ss_pred eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEE
Q 036953 37 ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLAS 112 (792)
Q Consensus 37 ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaS 112 (792)
+..+...+.+++|+++++++ ++++.|++|++|+..++ .+.+|...|.+++|+|++++|++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l----------------~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 674 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRI----------------ASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT 674 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEE----------------EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EecccccEEEEEECCCCCEE----------------EEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEE
Confidence 34566778888888887654 44567889999998766 45789999999999999999999
Q ss_pred EECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccC-CCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCC
Q 036953 113 THGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPL-RSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAE 190 (792)
Q Consensus 113 GS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~-dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpd 190 (792)
++.|++|+|||+.+++.+..+.+|...|.+++|+|. +..++++++.|++|++||+++++++..+ .|...|.+++|+|+
T Consensus 675 ~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 675 CSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 754 (1249)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSS
T ss_pred EeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecC
Confidence 999999999999999999999999999999999983 3458999999999999999999998887 58899999999999
Q ss_pred CcEEEEEc-CCeEEEEECCCCCcccCCe----------EEecCCCCeEEEEEccCCCeEEEEEe----eCccccCCCcee
Q 036953 191 GELLAVAS-GHKLYIWPYNNKEEASSPI----------IVLKTRRSLRAVHFHPHAAPFVLTAE----VNDLDSSDSSMT 255 (792)
Q Consensus 191 G~~LasgS-dd~V~IWDlrt~~~~~~~~----------~~~~h~~sVtsVafSPdG~~LlaS~s----~~dLrs~d~~~~ 255 (792)
+++|++++ ++.|++||+++.+...... ........+.+++|+|+|+.+++++. .|++........
T Consensus 755 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 755 DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeE
Confidence 99999998 5569999998775432000 00112347889999999997777654 333333332222
Q ss_pred eecC-C---CcccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccc
Q 036953 256 RATS-P---GYLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEP 326 (792)
Q Consensus 256 l~t~-s---g~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~ 326 (792)
+... . ....+.+....++.+..+..+.++. ....+.+|...|.+++|+|+|+.++
T Consensus 835 ~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~---------------- 898 (1249)
T 3sfz_A 835 IHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL---------------- 898 (1249)
T ss_dssp EECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE----------------
T ss_pred EcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE----------------
Confidence 2211 1 1223333333444444444444433 1224567999999999999999999
Q ss_pred cccccccCCCCCccccccccccccCC
Q 036953 327 SASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 327 s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-|+...+
T Consensus 899 ----------s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 899 ----------TASDDQTIRVWETKKV 914 (1249)
T ss_dssp ----------EEETTSCEEEEEHHHH
T ss_pred ----------EEeCCCeEEEEEcccc
Confidence 7888899998886543
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=1.5e-25 Score=243.90 Aligned_cols=282 Identities=16% Similarity=0.212 Sum_probs=200.4
Q ss_pred CCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC-----------CcCCCCCCeEEEEEcCCCC
Q 036953 40 KTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC-----------PLVPPPRSTIAAAFSPDGR 108 (792)
Q Consensus 40 ~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-----------~L~gH~~~V~sLafSPDG~ 108 (792)
+...+.+++|+|+++++++|. +....+|.......+..+..... ....+...|.+++|+|+++
T Consensus 63 h~~~V~~v~fspdg~~la~g~------~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred CCCEEEEEEECCCCCEEEEEc------CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 556788999999998887762 33344444433333333221110 0012333599999999999
Q ss_pred EEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEc
Q 036953 109 TLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFH 188 (792)
Q Consensus 109 ~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafS 188 (792)
+|++|+.|++|+|||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||++++++...+.+...+.+++|+
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 215 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 215 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEE
Confidence 999999999999999999999999999999999999999 8999999999999999999999999888888999999999
Q ss_pred C-CCcEEEEEc-CCeEEEEECCCCCcccCC----eEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCce--------
Q 036953 189 A-EGELLAVAS-GHKLYIWPYNNKEEASSP----IIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSM-------- 254 (792)
Q Consensus 189 p-dG~~LasgS-dd~V~IWDlrt~~~~~~~----~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~-------- 254 (792)
| ++++|++++ ++.|++||+++++..... .....|...|++++|+|+++.|++++.+..++.|+...
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 9 899999998 455999999887643210 01145788999999999999888777655555443221
Q ss_pred ---------eeecCCC---cccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECC------CCcEEEE
Q 036953 255 ---------TRATSPG---YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSID------DSRIDLQ 311 (792)
Q Consensus 255 ---------~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~Sp------DGr~lv~ 311 (792)
.+..... ...+.+....++.+..+..+.++. ....+.+|...|+++++++ +|.+|+
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~- 374 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA- 374 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE-
T ss_pred CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE-
Confidence 1111111 112222333344444444444443 1124556888888888775 677777
Q ss_pred ccccccCCCCccccccccccccCCCCCccccccccccccCCCC
Q 036953 312 HASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 312 ~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
+++.|++|.-|+....+|
T Consensus 375 -------------------------sgs~Dg~i~iW~~~~~~p 392 (393)
T 1erj_A 375 -------------------------TGSGDCKARIWKYKKIAP 392 (393)
T ss_dssp -------------------------EEETTSEEEEEEEEEC--
T ss_pred -------------------------EECCCCcEEECcccccCC
Confidence 899999999999766544
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=4.5e-25 Score=231.64 Aligned_cols=241 Identities=15% Similarity=0.149 Sum_probs=192.6
Q ss_pred CCCceEeeecccceeeC---CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCC
Q 036953 22 RRRARNVSRLLAHREIS---PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPP 94 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels---~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH 94 (792)
..+.+++|+....+.+. .+...+..+.|+++++ .+++++.|++|++|+..++ .+.+|
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~s~s~d~~i~vwd~~~~~~~~~~~~h 96 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN----------------WIIVGSDDFRIRVFNYNTGEKVVDFEAH 96 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT----------------EEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC----------------EEEEECCCCEEEEEECCCCcEEEEEeCC
Confidence 56778999987765443 4555677777777654 4566688999999998876 35789
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC-cEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 036953 95 PRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTG-NCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tg-k~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
.+.|.+++|+|++++|++|+.|++|+|||+.++ .....+.+|...|.+++|+|.++.+|++|+.|++|++||++++++.
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 999999999999999999999999999999887 4567789999999999999967789999999999999999887665
Q ss_pred EEe--ccCCCeeEEEEcC--CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccc
Q 036953 174 GSC--DFYRPIASIAFHA--EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLD 248 (792)
Q Consensus 174 ~t~--~h~s~V~sVafSp--dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLr 248 (792)
..+ .+...+..++|++ ++++|++++ ++.|++||+++++.. .....|...|++++|+|+++.|++++.+.
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~---~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg--- 250 (304)
T 2ynn_A 177 FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV---ATLEGHMSNVSFAVFHPTLPIIISGSEDG--- 250 (304)
T ss_dssp EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE---EEEECCSSCEEEEEECSSSSEEEEEETTS---
T ss_pred ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc---eeeCCCCCCEEEEEECCCCCEEEEEcCCC---
Confidence 555 4667899999986 678999998 555999999987753 35667899999999999999777666554
Q ss_pred cCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCc--EEE
Q 036953 249 SSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSR--IDL 310 (792)
Q Consensus 249 s~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr--~lv 310 (792)
.+.+|+..++...... ..|...+|+++++|+|+ +++
T Consensus 251 --------------------~i~iWd~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a 288 (304)
T 2ynn_A 251 --------------------TLKIWNSSTYKVEKTL------NVGLERSWCIATHPTGRKNYIA 288 (304)
T ss_dssp --------------------CEEEEETTTCCEEEEE------CCSSSSEEEEEECTTCGGGCEE
T ss_pred --------------------eEEEEECCCCceeeec------cCCCccEEEEEECCCCCceEEE
Confidence 3555665555554333 33778999999999885 455
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=3.1e-26 Score=248.31 Aligned_cols=274 Identities=16% Similarity=0.179 Sum_probs=209.8
Q ss_pred eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEE
Q 036953 35 REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTL 110 (792)
Q Consensus 35 rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~L 110 (792)
+.+..+...+.++.|+|++++ |++++.|++|++|+..++ .+..|...|.+++|+|++++|
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~----------------l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l 123 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNW----------------IVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSV 123 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSC----------------EEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEE
T ss_pred ecccccccEEEEEEEcCCCCE----------------EEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEE
Confidence 445677788999999998764 455678999999998765 467899999999999999999
Q ss_pred EEEECCCeEEEEECCCCc-------EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe------c
Q 036953 111 ASTHGDHTVKIIDCQTGN-------CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC------D 177 (792)
Q Consensus 111 aSGS~DGtVrIWDl~tgk-------~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~------~ 177 (792)
++|+.|+.|+|||+.+.. ....+.+|.+.|.++.|.|.++..|++|+.|++|++||+++++.+..+ .
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~ 203 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG 203 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC
Confidence 999999999999987532 345678999999999999955678999999999999999999988776 3
Q ss_pred cCCCeeEEEEcC-CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc--
Q 036953 178 FYRPIASIAFHA-EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-- 253 (792)
Q Consensus 178 h~s~V~sVafSp-dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-- 253 (792)
|...|.+++|++ ++++|++++ |+.|++||++..... ......|...|++++|+|+++.|++++.+..++.|+..
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRA--VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCC--CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcc--eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 678899999987 789999998 555999999854322 23566789999999999999988877776666655533
Q ss_pred ---eeeecCC----------CcccCCCCceEEEEecCCCEEEEeec--------c-CcccCCCceEEEeEECCCCcEEEE
Q 036953 254 ---MTRATSP----------GYLRYPPPAVFVANAQSGDHVSLAAE--------L-PLMSSLPFLIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 254 ---~~l~t~s----------g~~~~p~~~~~l~~~ssG~~~~l~s~--------l-~~l~gh~~~VwdV~~SpDGr~lv~ 311 (792)
..+.... ....|.+....++.+..+..+.++.. + ....+|...|++++|+|||++|+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~- 360 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC- 360 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE-
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE-
Confidence 1111110 12234344444444444444444431 0 12257999999999999999999
Q ss_pred ccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 312 HASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 312 ~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+|+.|++|.-|+....
T Consensus 361 -------------------------sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 361 -------------------------TGSWDKNLKIWAFSGH 376 (380)
T ss_dssp -------------------------EECTTSCEEEEECCSS
T ss_pred -------------------------EeeCCCCEEEEecCCC
Confidence 8999999999996543
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=1.4e-24 Score=244.16 Aligned_cols=294 Identities=19% Similarity=0.270 Sum_probs=224.0
Q ss_pred CCCceEeeecccc--eeeCCCCceeeeEEeeCCCceEeecCCCcee-------------------------ecCCcEEEE
Q 036953 22 RRRARNVSRLLAH--REISPKTKYVPKRQWVDASKLKTCGPSDSSV-------------------------RDAKRGLVS 74 (792)
Q Consensus 22 ~s~~r~V~~l~~~--rels~~tk~V~s~aWspd~~lla~G~~a~sv-------------------------~d~~~~L~S 74 (792)
..+...+|+...+ +.+..+...+..++|+|++..+.++..+..+ ...+..+++
T Consensus 241 ~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 241 DDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp TTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEE
Confidence 4556788876443 2233566678889999998876655433221 112456788
Q ss_pred EeCCCeEEEEeccCC---CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC
Q 036953 75 WVEAESLRHLSAKYC---PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE 151 (792)
Q Consensus 75 ~s~d~sIrvWd~~t~---~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~ 151 (792)
+..|+.+++|+.... .+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++|+| +++
T Consensus 321 ~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-dg~ 398 (577)
T 2ymu_A 321 ASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQ 398 (577)
T ss_dssp EETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-TSS
T ss_pred EeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-CCC
Confidence 889999999998755 45789999999999999999999999999999995 5778889999999999999999 999
Q ss_pred EEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEE
Q 036953 152 ILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAV 229 (792)
Q Consensus 152 lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsV 229 (792)
+|++++.|++|++||. +++.+..+ .|...|.+++|+|++++|++++. +.|++||..... ......|...|+++
T Consensus 399 ~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~----~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 399 TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQL----LQTLTGHSSSVRGV 473 (577)
T ss_dssp CEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCE----EEEEECCSSCEEEE
T ss_pred EEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCE----EEEEcCCCCCEEEE
Confidence 9999999999999996 45566555 68899999999999999999985 559999974432 23456789999999
Q ss_pred EEccCCCeEEEEEeeCccccCCCc----eeeecCCC---cccCCCCceEEEEecCCCEEEEee----ccCcccCCCceEE
Q 036953 230 HFHPHAAPFVLTAEVNDLDSSDSS----MTRATSPG---YLRYPPPAVFVANAQSGDHVSLAA----ELPLMSSLPFLIV 298 (792)
Q Consensus 230 afSPdG~~LlaS~s~~dLrs~d~~----~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s----~l~~l~gh~~~Vw 298 (792)
+|+|+++.|++++.+..++.|+.. ..+....+ .+.+.+....++.+..+..+.++. .+..+.+|...|+
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~ 553 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVW 553 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEE
Confidence 999999988887776666554422 12222222 233444444555555555666654 1234678999999
Q ss_pred EeEECCCCcEEEEccccccCCCCccccccccccccCCCCCcccccccccc
Q 036953 299 PSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSME 348 (792)
Q Consensus 299 dV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~ 348 (792)
+++|+|||++|+ +++.|++|.-||
T Consensus 554 ~~~fs~dg~~l~--------------------------s~~~D~~i~~Wd 577 (577)
T 2ymu_A 554 GVAFSPDGQTIA--------------------------SASSDKTVKLWN 577 (577)
T ss_dssp EEEECTTSSCEE--------------------------EEETTSCEEEEC
T ss_pred EEEEcCCCCEEE--------------------------EEeCCCEEEEeC
Confidence 999999999999 788899988886
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=7.6e-25 Score=233.48 Aligned_cols=225 Identities=15% Similarity=0.226 Sum_probs=189.5
Q ss_pred CCCceEeeecccceee---CCCCceeeeEEeeCCCceEeecCCCceee-----------------------------cCC
Q 036953 22 RRRARNVSRLLAHREI---SPKTKYVPKRQWVDASKLKTCGPSDSSVR-----------------------------DAK 69 (792)
Q Consensus 22 ~s~~r~V~~l~~~rel---s~~tk~V~s~aWspd~~lla~G~~a~sv~-----------------------------d~~ 69 (792)
..+.+.+|+....+.+ ..+...+..++|+|+++++++|..+..+. ..+
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET
T ss_pred CCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC
Confidence 5577899987665443 35666789999999999887765443221 112
Q ss_pred cEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEE
Q 036953 70 RGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRF 145 (792)
Q Consensus 70 ~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVaf 145 (792)
..+++++.|++|++||..++ .+.+|...|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...|++++|
T Consensus 155 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 234 (340)
T 1got_B 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234 (340)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE
T ss_pred CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE
Confidence 35788899999999999866 46789999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC---CCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEec
Q 036953 146 HPLRSEILASGSLDHEVRLWDANTSECIGSCDFY---RPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLK 221 (792)
Q Consensus 146 SP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~---s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~ 221 (792)
+| ++++|++++.|++|++||+++++.+..+.+. ..|.+++|+|+|++|+++++ +.|++||+.+.+.. .....
T Consensus 235 ~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~---~~~~~ 310 (340)
T 1got_B 235 FP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA---GVLAG 310 (340)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE---EEEEC
T ss_pred cC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe---eEeec
Confidence 99 9999999999999999999999888887644 47999999999999999985 55999999887643 35567
Q ss_pred CCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 222 TRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 222 h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
|...|++++|+|++..|++++.+..|+.|
T Consensus 311 h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 99999999999999988887777766654
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.7e-25 Score=232.09 Aligned_cols=267 Identities=16% Similarity=0.175 Sum_probs=184.3
Q ss_pred eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC------c-CC-CCCCeEEEEEcCCCC
Q 036953 37 ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP------L-VP-PPRSTIAAAFSPDGR 108 (792)
Q Consensus 37 ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~------L-~g-H~~~V~sLafSPDG~ 108 (792)
+..++..+.++.|+++ .+++++.|++|++|+...+. + .+ |...|.+++|+|+++
T Consensus 10 ~~~h~~~v~~~~~s~~------------------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 71 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG------------------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS 71 (330)
T ss_dssp EECCSSCEEEEEEETT------------------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS
T ss_pred eccCCCceeeeccCCC------------------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC
Confidence 4455666777777654 45566788889999887531 2 34 999999999999999
Q ss_pred EEEEEECCCeEEEEECCC-------CcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC----cEEEEe-
Q 036953 109 TLASTHGDHTVKIIDCQT-------GNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS----ECIGSC- 176 (792)
Q Consensus 109 ~LaSGS~DGtVrIWDl~t-------gk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg----~~v~t~- 176 (792)
+|++|+.|++|+|||+.. .+.+..+.+|...|.+++|+| ++++|++|+.|++|++||++.. +++..+
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 999999999999999853 356778899999999999999 8999999999999999999532 455555
Q ss_pred ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccC--CCeEEEEEeeCccccCCCc
Q 036953 177 DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPH--AAPFVLTAEVNDLDSSDSS 253 (792)
Q Consensus 177 ~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPd--G~~LlaS~s~~dLrs~d~~ 253 (792)
.|...|.+++|+|++++|++++ |+.|++||.++..... ......|...|++++|+|+ +..+++++.+..++.|+..
T Consensus 151 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 151 EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWEC-VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE-EEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeE-EEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 5889999999999999999999 4559999987653211 2345678999999999998 5556666655555554422
Q ss_pred e----------eeecCCC-------cccCCCCceEEEEecCCCEEEEee-cc-------CcccCCCc-eEEEeEECC--C
Q 036953 254 M----------TRATSPG-------YLRYPPPAVFVANAQSGDHVSLAA-EL-------PLMSSLPF-LIVPSVSID--D 305 (792)
Q Consensus 254 ~----------~l~t~sg-------~~~~p~~~~~l~~~ssG~~~~l~s-~l-------~~l~gh~~-~VwdV~~Sp--D 305 (792)
. ......+ ...|.+....+....++ .+.++. .. ....+|.. .|++++|+| +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~ 308 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG-VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG 308 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS-CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC----
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC-EEEEEEcCCCceEEEeccccccccceEEEEEEecCCC
Confidence 1 1111111 12222233333333333 333332 11 12245776 899999998 6
Q ss_pred CcEEEEccccccCCCCccccccccccccCCCCCcccccccccccc
Q 036953 306 SRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETF 350 (792)
Q Consensus 306 Gr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~ 350 (792)
|++|+ +++.|++|.-|+..
T Consensus 309 ~~~la--------------------------s~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 309 KTILA--------------------------TGGDDGIVNFWSLE 327 (330)
T ss_dssp -CCEE--------------------------EEETTSEEEEEEC-
T ss_pred ceEEE--------------------------EecCCCcEEEEEec
Confidence 88888 88999999999864
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=1.2e-24 Score=227.51 Aligned_cols=242 Identities=13% Similarity=0.086 Sum_probs=184.9
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcC--CCCEE
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSP--DGRTL 110 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSP--DG~~L 110 (792)
.+...+..++|+++++++ ++++.|++|++|+.... .+.+|.+.|.+++|++ ++++|
T Consensus 7 ~h~~~V~~~~~s~~g~~l----------------as~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRM----------------ATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp SCSSCEEEEEECTTSSEE----------------EEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred CCcCceEEEEECCCCCEE----------------EEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEE
Confidence 456678889998887654 55578899999987532 4679999999999986 48999
Q ss_pred EEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCc---EEEEeccCCCee
Q 036953 111 ASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLR--SEILASGSLDHEVRLWDANTSE---CIGSCDFYRPIA 183 (792)
Q Consensus 111 aSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~d--g~lLaSgS~DgtVrLWDl~tg~---~v~t~~h~s~V~ 183 (792)
++|+.|++|+|||+.+++ .+..+.+|...|.+++|+| + +.+|++++.|++|++||++++. ......|...|.
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~ 149 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEE
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccc
Confidence 999999999999998874 5677889999999999999 5 7899999999999999998763 222336888999
Q ss_pred EEEEcCC-------------CcEEEEEc-CCeEEEEECCCCCcccC-CeEEecCCCCeEEEEEccCC---CeEEEEEeeC
Q 036953 184 SIAFHAE-------------GELLAVAS-GHKLYIWPYNNKEEASS-PIIVLKTRRSLRAVHFHPHA---APFVLTAEVN 245 (792)
Q Consensus 184 sVafSpd-------------G~~LasgS-dd~V~IWDlrt~~~~~~-~~~~~~h~~sVtsVafSPdG---~~LlaS~s~~ 245 (792)
+++|+|+ +++|++++ |+.|++||+++.+.... ...+..|...|++++|+|++ .+|++++.+.
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 9999997 57899998 45599999987653211 12445689999999999996 5454444444
Q ss_pred ccccCCCceeeecCCCcccCCCCceEEEEecCCC--E-EEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCc
Q 036953 246 DLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGD--H-VSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNM 322 (792)
Q Consensus 246 dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~--~-~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v 322 (792)
.++.| ....+. . ..+. ...+|...|++++|+|+|++|+
T Consensus 230 ~v~iW-----------------------d~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~la------------ 270 (297)
T 2pm7_B 230 TCIIW-----------------------TQDNEQGPWKKTLL----KEEKFPDVLWRASWSLSGNVLA------------ 270 (297)
T ss_dssp CEEEE-----------------------EESSTTSCCEEEES----SSSCCSSCEEEEEECSSSCCEE------------
T ss_pred cEEEE-----------------------EeCCCCCccceeee----ecccCCCcEEEEEECCCCCEEE------------
Confidence 44433 322211 0 1111 1134788999999999999999
Q ss_pred cccccccccccCCCCCcccccccccccc
Q 036953 323 QIEPSASLHLQSDSNVEQDGTVPSMETF 350 (792)
Q Consensus 323 ~~~~s~~~q~~~~~sgs~D~tv~p~~~~ 350 (792)
+++.|++|.-|+..
T Consensus 271 --------------s~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 271 --------------LSGGDNKVTLWKEN 284 (297)
T ss_dssp --------------EEETTSCEEEEEEC
T ss_pred --------------EEcCCCcEEEEEEC
Confidence 78889999999853
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=8.3e-24 Score=218.70 Aligned_cols=237 Identities=18% Similarity=0.208 Sum_probs=193.9
Q ss_pred CCceEeeecccceeeC--------CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----
Q 036953 23 RRARNVSRLLAHREIS--------PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP---- 90 (792)
Q Consensus 23 s~~r~V~~l~~~rels--------~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~---- 90 (792)
.+..++|+....+... .+...+..+.|++++++ ++++..++.|++|+....+
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------------l~~~~~d~~i~~~d~~~~~~~~~ 134 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT----------------LIVGGEASTLSIWDLAAPTPRIK 134 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE----------------EEEEESSSEEEEEECCCC--EEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE----------------EEEEcCCCcEEEEECCCCCccee
Confidence 5678889876543222 24456777888877654 4445677888888876542
Q ss_pred --cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC
Q 036953 91 --LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDAN 168 (792)
Q Consensus 91 --L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~ 168 (792)
+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||++
T Consensus 135 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred eecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECC
Confidence 467889999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCcEEEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCcc
Q 036953 169 TSECIGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDL 247 (792)
Q Consensus 169 tg~~v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dL 247 (792)
+++.+..+.+...+.+++|+|++++|++++ ++.|++||+++.+. .....|...|++++|+|+++.+++++.+.
T Consensus 214 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-- 287 (337)
T 1gxr_A 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDN-- 287 (337)
T ss_dssp TTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE----EEECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred CCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe----EEEcCCccceeEEEECCCCCEEEEecCCC--
Confidence 999999999999999999999999999998 45599999988763 34567889999999999999777666443
Q ss_pred ccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 248 DSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 248 rs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
.+.+|...++....... |...|.++.|+|+|++|+
T Consensus 288 ---------------------~i~~~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~ 322 (337)
T 1gxr_A 288 ---------------------LLNAWRTPYGASIFQSK-------ESSSVLSCDISVDDKYIV 322 (337)
T ss_dssp ---------------------EEEEEETTTCCEEEEEE-------CSSCEEEEEECTTSCEEE
T ss_pred ---------------------cEEEEECCCCeEEEEec-------CCCcEEEEEECCCCCEEE
Confidence 24445555554442222 778899999999999999
No 23
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=7.4e-25 Score=240.55 Aligned_cols=234 Identities=17% Similarity=0.235 Sum_probs=188.9
Q ss_pred CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC
Q 036953 90 PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANT 169 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~t 169 (792)
.+.+|...|++++|+|++++|++|+.|++|+|||+.+++.+..+.+|.+.|++++|+| ++++|++|+.|++|++||+.+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTS
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC
Confidence 4678999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCcc
Q 036953 170 SECIGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDL 247 (792)
Q Consensus 170 g~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dL 247 (792)
++++..+ .|...|.+++|+|++++|++++ |+.|++||++++.... ....|...|.++.|+|++..+++++.+..+
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~---~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK---TFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE---EEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 9998887 5889999999999999999998 5559999999887543 456788999999999999988777765555
Q ss_pred ccCCC-----ceeeecCCC---cccCCC--------------------CceEEEEecCCCEEEEee-----ccCcccCCC
Q 036953 248 DSSDS-----SMTRATSPG---YLRYPP--------------------PAVFVANAQSGDHVSLAA-----ELPLMSSLP 294 (792)
Q Consensus 248 rs~d~-----~~~l~t~sg---~~~~p~--------------------~~~~l~~~ssG~~~~l~s-----~l~~l~gh~ 294 (792)
+.|+. ...+..... ...|.+ +..+++.+..+..+.++. ....+.+|.
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 54432 222222111 111211 123455555555555554 123456799
Q ss_pred ceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 295 FLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 295 ~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
..|.++.|+|+|++|+ +++.|++|.-||...+.
T Consensus 339 ~~v~~v~~~~~g~~l~--------------------------s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFIL--------------------------SCADDKTLRVWDYKNKR 371 (410)
T ss_dssp SCEEEEEECSSSSCEE--------------------------EEETTTEEEEECCTTSC
T ss_pred CcEEEEEEcCCCCEEE--------------------------EEeCCCeEEEEECCCCc
Confidence 9999999999999999 88999999999976553
No 24
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=6.7e-24 Score=232.29 Aligned_cols=251 Identities=15% Similarity=0.204 Sum_probs=188.7
Q ss_pred eCCCeEEEEeccCCC------cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCC
Q 036953 76 VEAESLRHLSAKYCP------LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLR 149 (792)
Q Consensus 76 s~d~sIrvWd~~t~~------L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~d 149 (792)
+.|++|++||..+++ +.+|...|++++|+|+|++|++|+.|++|+|||+.+++++..+.+|...+.++.|++
T Consensus 122 gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~-- 199 (420)
T 4gga_A 122 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS-- 199 (420)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC--
Confidence 457889999988763 457888999999999999999999999999999999999999999999999988864
Q ss_pred CCEEEEEeCCCeEEEEECCCCc-EEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccC-CeEEecCCCC
Q 036953 150 SEILASGSLDHEVRLWDANTSE-CIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASS-PIIVLKTRRS 225 (792)
Q Consensus 150 g~lLaSgS~DgtVrLWDl~tg~-~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~-~~~~~~h~~s 225 (792)
.+|++|+.|+.+++||..... .+..+ .|...+..+.|++++++|++++. +.+++||....+.... ......|...
T Consensus 200 -~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~ 278 (420)
T 4gga_A 200 -YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 278 (420)
T ss_dssp -TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC
T ss_pred -CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc
Confidence 899999999999999998754 44444 58899999999999999999985 4599999988764432 2345568889
Q ss_pred eEEEEEccCCCeEEEEEe--------eCccccCCCceeeecCCC--cccC-CCCceEEEE-ecCCCEEEEee-----ccC
Q 036953 226 LRAVHFHPHAAPFVLTAE--------VNDLDSSDSSMTRATSPG--YLRY-PPPAVFVAN-AQSGDHVSLAA-----ELP 288 (792)
Q Consensus 226 VtsVafSPdG~~LlaS~s--------~~dLrs~d~~~~l~t~sg--~~~~-p~~~~~l~~-~ssG~~~~l~s-----~l~ 288 (792)
|.+++|+|++..++++++ .|++........+..... ...+ +.....+.. +..+..+.++. ...
T Consensus 279 V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 279 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp EEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred eeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE
Confidence 999999999888877643 333333322222222221 1111 111122211 11222233332 122
Q ss_pred cccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCCCC
Q 036953 289 LMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIPP 355 (792)
Q Consensus 289 ~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p~ 355 (792)
.+.+|...|++++|+|||++|+ +++.|+||.-|+++...|.
T Consensus 359 ~l~gH~~~V~~l~~spdg~~l~--------------------------S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 359 ELKGHTSRVLSLTMSPDGATVA--------------------------SAAADETLRLWRCFELDPA 399 (420)
T ss_dssp EECCCSSCEEEEEECTTSSCEE--------------------------EEETTTEEEEECCSCSSCC
T ss_pred EEcCCCCCEEEEEEcCCCCEEE--------------------------EEecCCeEEEEECCCCCcc
Confidence 4567999999999999999999 8999999999999988665
No 25
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=7.6e-25 Score=241.28 Aligned_cols=195 Identities=14% Similarity=0.170 Sum_probs=154.1
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcC-CCCEEE
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSP-DGRTLA 111 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSP-DG~~La 111 (792)
++...|++++|+|... ..|++++.|+.|++||..++ .+.+|.+.|++++|+| ++++|+
T Consensus 117 ~~~~~V~~l~~~P~~~---------------~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 117 PFDRRATSLAWHPTHP---------------STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY 181 (435)
T ss_dssp ECSSCEEEEEECSSCT---------------TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE
T ss_pred CCCCCEEEEEEeCCCC---------------CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE
Confidence 4455688999988532 13455678999999998654 3568999999999998 789999
Q ss_pred EEECCCeEEEEECCCCcEEEEecC--CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEc
Q 036953 112 STHGDHTVKIIDCQTGNCLKVLSG--HRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFH 188 (792)
Q Consensus 112 SGS~DGtVrIWDl~tgk~v~~L~g--H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafS 188 (792)
+|+.|++|+|||+.++........ +...+.+++|+| ++++|++|+.|++|++||++... +..+ .|...|.+++|+
T Consensus 182 s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKE-LWNLRMHKKKVTHVALN 259 (435)
T ss_dssp EECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCB-CCCSBCCSSCEEEEEEC
T ss_pred EEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcce-eEEEecccceEEeeeec
Confidence 999999999999987654433333 345678999999 99999999999999999997644 4444 588999999999
Q ss_pred CCCc-EEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 189 AEGE-LLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 189 pdG~-~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
|+++ +|++++ |+.|+|||+++.+..........|...|++++|+|+|++|++++.+..|+.|
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred CCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 9986 677777 5559999998877554334456688999999999999988888775555443
No 26
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=1.3e-23 Score=218.47 Aligned_cols=272 Identities=14% Similarity=0.111 Sum_probs=204.9
Q ss_pred eeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---------CcCCCCCCeEEEEEcCC
Q 036953 36 EISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---------PLVPPPRSTIAAAFSPD 106 (792)
Q Consensus 36 els~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---------~L~gH~~~V~sLafSPD 106 (792)
.+..++..|++++|+|+.. ..|++++.|++|++|+.... .+.+|...|.+++|+|+
T Consensus 33 tL~GH~~~V~~v~~sp~~~---------------~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFP---------------DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp EECCCSSCEEEEEECTTCT---------------TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EECCccCCEEEEEEeCCCC---------------CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence 4567888999999998731 24566688899999987543 35789999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCCeeE
Q 036953 107 GRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC--DFYRPIAS 184 (792)
Q Consensus 107 G~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--~h~s~V~s 184 (792)
+++|++++.|+.|++|+............+...+..+.+++ ++++|++++.|+.+++||+......... .+...+..
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccc
Confidence 99999999999999999999998888888999999999999 8899999999999999999876554433 47889999
Q ss_pred EEEcCCC--cEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----eee
Q 036953 185 IAFHAEG--ELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTR 256 (792)
Q Consensus 185 VafSpdG--~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l 256 (792)
++|++++ .++++++ ++.|++||+++.+.. .....|...|++++|+|+++.|++++.+..++.|+.. ..+
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~---~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK---TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCCcee---eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 9999875 4677777 455999999988753 2456788999999999999988877765555444322 222
Q ss_pred ecCCC--cccCCCCceEEEEecCCCEEEEee--------------ccCcccCCCceEEEeEECCCCcEEEEccccccCCC
Q 036953 257 ATSPG--YLRYPPPAVFVANAQSGDHVSLAA--------------ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSS 320 (792)
Q Consensus 257 ~t~sg--~~~~p~~~~~l~~~ssG~~~~l~s--------------~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg 320 (792)
..... ...+.+...+++...+ ..+.++. ......+|...|++++|+|||++|+
T Consensus 254 ~~~~~v~~~~~~~~~~~~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~---------- 322 (340)
T 4aow_A 254 DGGDIINALCFSPNRYWLCAATG-PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF---------- 322 (340)
T ss_dssp ECSSCEEEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE----------
T ss_pred cCCceEEeeecCCCCceeeccCC-CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE----------
Confidence 22211 2223333344444333 3333332 0112346899999999999999999
Q ss_pred CccccccccccccCCCCCccccccccccccCCC
Q 036953 321 NMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 321 ~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
+++.|++|.-|++..|+
T Consensus 323 ----------------sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 323 ----------------AGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ----------------EEETTSCEEEEEEEC--
T ss_pred ----------------EEeCCCEEEEEeCCCcC
Confidence 89999999999988774
No 27
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=3.4e-24 Score=227.97 Aligned_cols=228 Identities=17% Similarity=0.262 Sum_probs=190.5
Q ss_pred CCCCceEeeecccce-----eeCCCCceeeeEEeeCCCceEeecCCCceee--------------------------cCC
Q 036953 21 LRRRARNVSRLLAHR-----EISPKTKYVPKRQWVDASKLKTCGPSDSSVR--------------------------DAK 69 (792)
Q Consensus 21 ~~s~~r~V~~l~~~r-----els~~tk~V~s~aWspd~~lla~G~~a~sv~--------------------------d~~ 69 (792)
...+.+++|+....+ .+..+...+.++.|++++.+++++..+..++ ..+
T Consensus 55 s~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg 134 (321)
T 3ow8_A 55 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 134 (321)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS
T ss_pred cCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC
Confidence 356778999875443 2446677889999999988776665443322 123
Q ss_pred cEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEE
Q 036953 70 RGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRF 145 (792)
Q Consensus 70 ~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVaf 145 (792)
..++++..++.+++|+...+ .+..|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|++++|
T Consensus 135 ~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 135 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 214 (321)
T ss_dssp SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEE
T ss_pred CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEE
Confidence 45777788999999998765 35678889999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCC
Q 036953 146 HPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTR 223 (792)
Q Consensus 146 SP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~ 223 (792)
+| ++++|++++.|++|++||+++++.+..+ .|...|.+++|+|++++|++++. +.|++||+++++... ....|.
T Consensus 215 sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~---~~~~h~ 290 (321)
T 3ow8_A 215 SP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH---TFFDHQ 290 (321)
T ss_dssp CT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCCS
T ss_pred cC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE---EEcCCC
Confidence 99 9999999999999999999999988887 48899999999999999999985 459999999887543 456789
Q ss_pred CCeEEEEEccCCCeEEEEEeeCccccCCC
Q 036953 224 RSLRAVHFHPHAAPFVLTAEVNDLDSSDS 252 (792)
Q Consensus 224 ~sVtsVafSPdG~~LlaS~s~~dLrs~d~ 252 (792)
..|++++|+|+++.|++++.+..++.|+.
T Consensus 291 ~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 291 DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999998888877777776653
No 28
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=2e-23 Score=215.10 Aligned_cols=264 Identities=15% Similarity=0.214 Sum_probs=192.2
Q ss_pred eeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC------cCCCCCCeEEEEEcCCCCEEEEEECCC
Q 036953 44 VPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP------LVPPPRSTIAAAFSPDGRTLASTHGDH 117 (792)
Q Consensus 44 V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~------L~gH~~~V~sLafSPDG~~LaSGS~DG 117 (792)
.+.++|++++ ++++| .|++|++||..+++ +.+|...|++++|+|++++|++|+.|+
T Consensus 28 ~~~l~WS~~~-~lAvg-----------------~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg 89 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-----------------LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA 89 (318)
T ss_dssp CBCEEECTTS-EEEEE-----------------ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEECCCC-EEEEE-----------------eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC
Confidence 5678888764 34333 47788888887653 357888999999999999999999999
Q ss_pred eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc-EEEEe-ccCCCeeEEEEcCCCcEEE
Q 036953 118 TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSE-CIGSC-DFYRPIASIAFHAEGELLA 195 (792)
Q Consensus 118 tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~-~v~t~-~h~s~V~sVafSpdG~~La 195 (792)
+|+|||+.+++++..+.+|...+.++.+. +.++++++.++.+++|+..... .+..+ .|...+..+.|++++++|+
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred cEEEeecCCceeEEEecCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE
Confidence 99999999999999999999988877664 4899999999999999998764 33443 6889999999999999999
Q ss_pred EEcC-CeEEEEECCCCCcccC-CeEEecCCCCeEEEEEccCCCeEEEEEe--------eCccccCCCceeeecCCC--cc
Q 036953 196 VASG-HKLYIWPYNNKEEASS-PIIVLKTRRSLRAVHFHPHAAPFVLTAE--------VNDLDSSDSSMTRATSPG--YL 263 (792)
Q Consensus 196 sgSd-d~V~IWDlrt~~~~~~-~~~~~~h~~sVtsVafSPdG~~LlaS~s--------~~dLrs~d~~~~l~t~sg--~~ 263 (792)
+++. +.|++||+++++.... ......+...|..+.++|++..++..+. +|+............... ..
T Consensus 167 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~ 246 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSI 246 (318)
T ss_dssp EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeee
Confidence 9985 4599999988765432 2344557889999999999887775443 222222221111111111 11
Q ss_pred cC-CCCceEEE-EecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCC
Q 036953 264 RY-PPPAVFVA-NAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDS 336 (792)
Q Consensus 264 ~~-p~~~~~l~-~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~ 336 (792)
.+ +.....+. .+..+..+.++. ....+.+|...|++++|+|||++|+
T Consensus 247 ~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-------------------------- 300 (318)
T 4ggc_A 247 LWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-------------------------- 300 (318)
T ss_dssp EEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE--------------------------
T ss_pred eecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE--------------------------
Confidence 11 11122221 122222333332 1224567999999999999999999
Q ss_pred CCccccccccccccCCCC
Q 036953 337 NVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 337 sgs~D~tv~p~~~~~~~p 354 (792)
+++.|++|.-|+++...|
T Consensus 301 S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 301 SAAADETLRLWRCFELDP 318 (318)
T ss_dssp EEETTTEEEEECCSCCCC
T ss_pred EEecCCeEEEEECCCCCC
Confidence 899999999999998876
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-23 Score=219.34 Aligned_cols=270 Identities=10% Similarity=0.072 Sum_probs=200.4
Q ss_pred eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEE
Q 036953 37 ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLAS 112 (792)
Q Consensus 37 ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaS 112 (792)
+..+...+.+++|+++++++ +++..++.|++|+..++ .+.+|...|.+++|+|++++|++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l----------------~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 91 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLL----------------FSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVT 91 (369)
T ss_dssp EECCSSCEEEEEECTTSCEE----------------EEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEeeceEEEEEEcCCCCEE----------------EEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEE
Confidence 44567789999999987654 44467788888887655 35789999999999999999999
Q ss_pred EECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcE-----------EEEe
Q 036953 113 THGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSEC-----------IGSC 176 (792)
Q Consensus 113 GS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~-----------v~t~ 176 (792)
++.|+.|++||+.+++.+..+. |...|.+++|+| +++++++++.+ +.|++||+..... +..+
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred EeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 9999999999999999999888 889999999999 99999999999 9999999976532 1112
Q ss_pred -ccCC--CeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCC
Q 036953 177 -DFYR--PIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDS 252 (792)
Q Consensus 177 -~h~s--~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~ 252 (792)
.+.. .+.+++|+|++++|++++ ++.|++||+++.... ......|...|.+++|+|+++.|++++.+..+..++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY--VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE--EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe--EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 2333 899999999999999988 556999999884322 2345568899999999999998888776544443332
Q ss_pred -----ceeeecCCC--cccCCCCceEEEEecCCC--------------EEEEee-----ccCcccCCCceEEEeEECCCC
Q 036953 253 -----SMTRATSPG--YLRYPPPAVFVANAQSGD--------------HVSLAA-----ELPLMSSLPFLIVPSVSIDDS 306 (792)
Q Consensus 253 -----~~~l~t~sg--~~~~p~~~~~l~~~ssG~--------------~~~l~s-----~l~~l~gh~~~VwdV~~SpDG 306 (792)
...+..... ...+.+....++...... .+.+.. ....+.+|...|.+++|+|||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 248 STLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCC
Confidence 222221111 222333333333332222 222222 112345699999999999999
Q ss_pred cEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 307 RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 307 r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
++|+ +++.|++|.-|+...+
T Consensus 328 ~~l~--------------------------s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 328 TSYA--------------------------SGGEDGFIRLHHFEKS 347 (369)
T ss_dssp SEEE--------------------------EEETTSEEEEEEECHH
T ss_pred CEEE--------------------------EEcCCCeEEEEECccc
Confidence 9999 7888999999987554
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=9.1e-24 Score=227.39 Aligned_cols=226 Identities=15% Similarity=0.244 Sum_probs=188.3
Q ss_pred CCCCceEeeeccccee---eCCCCceeeeEEeeCCCceEeecCCCceee-------------------------------
Q 036953 21 LRRRARNVSRLLAHRE---ISPKTKYVPKRQWVDASKLKTCGPSDSSVR------------------------------- 66 (792)
Q Consensus 21 ~~s~~r~V~~l~~~re---ls~~tk~V~s~aWspd~~lla~G~~a~sv~------------------------------- 66 (792)
...+...+|+....+. +......+..++|+|++..+++|..+..+.
T Consensus 83 s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 83 SQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred eCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 3567789998755433 334556788999999999988876543321
Q ss_pred -cCCcEEEEEeCCCeEEEEeccCCC----cCCCCCCeEEEEEcC--CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCC
Q 036953 67 -DAKRGLVSWVEAESLRHLSAKYCP----LVPPPRSTIAAAFSP--DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRT 139 (792)
Q Consensus 67 -d~~~~L~S~s~d~sIrvWd~~t~~----L~gH~~~V~sLafSP--DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~ 139 (792)
..+..+++++.|+++++||..+++ +.+|...|.+++|+| ++++|++|+.|++|++||+.+++++..+.+|...
T Consensus 163 ~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~ 242 (354)
T 2pbi_B 163 TNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD 242 (354)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 134478899999999999998763 578999999999988 5789999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecc---CCCeeEEEEcCCCcEEEEEcCC-eEEEEECCCCCcccC
Q 036953 140 PWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDF---YRPIASIAFHAEGELLAVASGH-KLYIWPYNNKEEASS 215 (792)
Q Consensus 140 VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h---~s~V~sVafSpdG~~LasgSdd-~V~IWDlrt~~~~~~ 215 (792)
|++++|+| ++++|++++.|++|++||+++++.+..+.. ...+.+++|+|++++|++++.+ .|++||+.+++..
T Consensus 243 v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~-- 319 (354)
T 2pbi_B 243 VNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRV-- 319 (354)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE--
T ss_pred eEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceE--
Confidence 99999999 899999999999999999999888777743 3468999999999999999854 5999999887743
Q ss_pred CeEEecCCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 216 PIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 216 ~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
.....|...|++++|+|+|++|++++.+..++.|
T Consensus 320 -~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 320 -SILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp -EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred -EEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 2456799999999999999988887776666554
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=7.5e-24 Score=247.34 Aligned_cols=269 Identities=13% Similarity=0.097 Sum_probs=198.4
Q ss_pred eeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---------CcCCCCCCeEEEEEcCC
Q 036953 36 EISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---------PLVPPPRSTIAAAFSPD 106 (792)
Q Consensus 36 els~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---------~L~gH~~~V~sLafSPD 106 (792)
.+..++..|.+++|++++ ...|++++.|++|++|+.... .+.+|...|.+++|+|+
T Consensus 377 ~l~~H~~~V~~v~~~~~~---------------~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~ 441 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDN---------------ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD 441 (694)
T ss_dssp EEECCSSCEEEEECCTTC---------------CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT
T ss_pred hcccCCceeEEEEecCCC---------------CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC
Confidence 345666777777776653 235677889999999987642 35789999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe----ccCCCe
Q 036953 107 GRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC----DFYRPI 182 (792)
Q Consensus 107 G~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~----~h~s~V 182 (792)
+++|++|+.|++|+|||+.+++++..+.+|...|.+++|+| ++++|++++.|++|++||+......... .|...|
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 99999999999999999999999999999999999999999 9999999999999999998765443332 377889
Q ss_pred eEEEEcCCC--cEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----e
Q 036953 183 ASIAFHAEG--ELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----M 254 (792)
Q Consensus 183 ~sVafSpdG--~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~ 254 (792)
.+++|+|++ .+|++++ ++.|++||+++.+.. .....|...|++++|+|+++.|++++.+..|+.|+.. .
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~---~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR---STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE---EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 999999987 5788888 555999999887643 2456789999999999999988877776666555432 1
Q ss_pred eeecCCC--cccCCCCceEEEEecCCCEEEEeec------------------------cCcccCCCceEEEeEECCCCcE
Q 036953 255 TRATSPG--YLRYPPPAVFVANAQSGDHVSLAAE------------------------LPLMSSLPFLIVPSVSIDDSRI 308 (792)
Q Consensus 255 ~l~t~sg--~~~~p~~~~~l~~~ssG~~~~l~s~------------------------l~~l~gh~~~VwdV~~SpDGr~ 308 (792)
.+..... ...+.+....++...++ .+.++.- ......+...+.+++|+|||++
T Consensus 598 ~~~~~~~v~~~~~sp~~~~l~~~~~~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~ 676 (694)
T 3dm0_A 598 SLEANSVIHALCFSPNRYWLCAATEH-GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGST 676 (694)
T ss_dssp CCBCSSCEEEEEECSSSSEEEEEETT-EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSE
T ss_pred EecCCCcEEEEEEcCCCcEEEEEcCC-CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCE
Confidence 1111111 22233333333332222 2222220 0011123345788999999999
Q ss_pred EEEccccccCCCCccccccccccccCCCCCcccccccccccc
Q 036953 309 DLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETF 350 (792)
Q Consensus 309 lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~ 350 (792)
|+ +|+.|++|.-|++.
T Consensus 677 l~--------------------------sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 677 LF--------------------------SGYTDGVIRVWGIG 692 (694)
T ss_dssp EE--------------------------EEETTSEEEEEEC-
T ss_pred EE--------------------------EEcCCCeEEEEecc
Confidence 99 89999999999864
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=3e-24 Score=232.02 Aligned_cols=209 Identities=15% Similarity=0.162 Sum_probs=169.6
Q ss_pred CCCceEeeecccceeeC-------CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----C
Q 036953 22 RRRARNVSRLLAHREIS-------PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----P 90 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels-------~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~ 90 (792)
..+.+++|+....+.+. .+...+.+++|+|++++ |++++.|++|++||..++ .
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~----------------l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ----------------AVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE----------------EEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCE----------------EEEEeCCCeEEEEECCCCcEEEE
Confidence 45678999886654322 35567888888888664 455678899999998876 4
Q ss_pred cCCCCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEec--CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEEC
Q 036953 91 LVPPPRSTIAAAFSPDG-RTLASTHGDHTVKIIDCQTGNCLKVLS--GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDA 167 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG-~~LaSGS~DGtVrIWDl~tgk~v~~L~--gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl 167 (792)
+.+|...|++++|++++ ..|++++.|++|+|||+.++++...+. .|...+.+++|+|.++++|++|+.|++|++||+
T Consensus 165 ~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 165 YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 67999999999999987 478999999999999999999888775 456679999999977889999999999999999
Q ss_pred CCCcEEEEe-ccCCCeeEEEEcCCC-cEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe-
Q 036953 168 NTSECIGSC-DFYRPIASIAFHAEG-ELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE- 243 (792)
Q Consensus 168 ~tg~~v~t~-~h~s~V~sVafSpdG-~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s- 243 (792)
++++++..+ .|...|++++|+|++ ++|++++. +.|+|||+++++. ....+|.+.|++++|+|+++.++++++
T Consensus 245 ~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~----~~~~~H~~~V~~v~~sp~~~~llas~s~ 320 (344)
T 4gqb_B 245 KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL----FRSQAHRDFVRDATWSPLNHSLLTTVGW 320 (344)
T ss_dssp CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE----EEECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE----EEEcCCCCCEEEEEEeCCCCeEEEEEcC
Confidence 999998887 488999999999998 57888884 5599999988763 346779999999999999998887765
Q ss_pred eCccccC
Q 036953 244 VNDLDSS 250 (792)
Q Consensus 244 ~~dLrs~ 250 (792)
+..|..|
T Consensus 321 D~~v~~w 327 (344)
T 4gqb_B 321 DHQVVHH 327 (344)
T ss_dssp TSCEEEE
T ss_pred CCeEEEE
Confidence 5545443
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.1e-24 Score=227.70 Aligned_cols=288 Identities=11% Similarity=0.105 Sum_probs=209.9
Q ss_pred CCCCceEeeeccccee---eC--CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC----C--
Q 036953 21 LRRRARNVSRLLAHRE---IS--PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY----C-- 89 (792)
Q Consensus 21 ~~s~~r~V~~l~~~re---ls--~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t----~-- 89 (792)
...+..++|+...... +. .+...+..++|++++.++ +++..++.|++|+... .
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l----------------~~~~~dg~v~vw~~~~~~~~~~~ 105 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKII----------------AGALDNGSLELYSTNEANNAINS 105 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCE----------------EEEESSSCEEEECCSSTTSCCCE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeE----------------EEEccCCeEEEeecccccccccc
Confidence 3556789999876542 21 345578899998887654 4446678889998876 1
Q ss_pred --CcCCCCCCeEEEEEcCC-CCEEEEEECCCeEEEEECCCCc------EEE---EecCCCCCcEEEEEccCCCCEEEEEe
Q 036953 90 --PLVPPPRSTIAAAFSPD-GRTLASTHGDHTVKIIDCQTGN------CLK---VLSGHRRTPWVVRFHPLRSEILASGS 157 (792)
Q Consensus 90 --~L~gH~~~V~sLafSPD-G~~LaSGS~DGtVrIWDl~tgk------~v~---~L~gH~~~VtsVafSP~dg~lLaSgS 157 (792)
.+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++ ... .+.+|...|.+++|+|+++.+|++++
T Consensus 106 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 106 MARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp EEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred hhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 36789999999999998 8999999999999999998876 332 34679999999999993389999999
Q ss_pred CCCeEEEEECCCCcEEEEecc-------CCCeeEEEEcCCC-cEEEEEcCC----eEEEEECCCCCcccCCeEEe-cCCC
Q 036953 158 LDHEVRLWDANTSECIGSCDF-------YRPIASIAFHAEG-ELLAVASGH----KLYIWPYNNKEEASSPIIVL-KTRR 224 (792)
Q Consensus 158 ~DgtVrLWDl~tg~~v~t~~h-------~s~V~sVafSpdG-~~LasgSdd----~V~IWDlrt~~~~~~~~~~~-~h~~ 224 (792)
.|+.|++||+++++++..+.. ...+.+++|+|++ .+|++++++ .|++||+++.+... .... .|..
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~--~~~~~~~~~ 263 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL--QTLNQGHQK 263 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS--BCCCSCCSS
T ss_pred CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc--EEeecCccC
Confidence 999999999999999888853 6889999999997 688888844 79999998864321 2334 6889
Q ss_pred CeEEEEEcc-CCCeEEEEEeeCccccCCC-----ceeeecCCC---cccCCCCc-eEEEEecCCCEEEEeecc-----Cc
Q 036953 225 SLRAVHFHP-HAAPFVLTAEVNDLDSSDS-----SMTRATSPG---YLRYPPPA-VFVANAQSGDHVSLAAEL-----PL 289 (792)
Q Consensus 225 sVtsVafSP-dG~~LlaS~s~~dLrs~d~-----~~~l~t~sg---~~~~p~~~-~~l~~~ssG~~~~l~s~l-----~~ 289 (792)
.|++++|+| +++.|++++.+..++.|+. ...+....+ ...|.+.. ..++....+..+.++.-. ..
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 999999999 8887777776555554442 233332222 33344433 455555555555555410 00
Q ss_pred -----------------------------------ccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccC
Q 036953 290 -----------------------------------MSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQS 334 (792)
Q Consensus 290 -----------------------------------l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~ 334 (792)
...|...+..++|+|||++++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la------------------------ 399 (416)
T 2pm9_A 344 EQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQ------------------------ 399 (416)
T ss_dssp C----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEEC------------------------
T ss_pred cccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEE------------------------
Confidence 011455666777788888777
Q ss_pred CCCCccccccccccccCC
Q 036953 335 DSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 335 ~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-|++..+
T Consensus 400 --~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 400 --ITPDGKGVSITNPKIS 415 (416)
T ss_dssp --BCTTSSCBCCBCCCCC
T ss_pred --EeCCCCeEEEEEeccC
Confidence 7889999999997654
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=3.7e-23 Score=221.35 Aligned_cols=252 Identities=13% Similarity=0.125 Sum_probs=185.9
Q ss_pred eeCCCCceeeeEEeeCCC-ceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC------cCCCCCCeEEEEEcC-CC
Q 036953 36 EISPKTKYVPKRQWVDAS-KLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP------LVPPPRSTIAAAFSP-DG 107 (792)
Q Consensus 36 els~~tk~V~s~aWspd~-~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~------L~gH~~~V~sLafSP-DG 107 (792)
.+..+...+.+++|++++ + .+++++.|+.|++|+..... +.+|...|.+++|+| ++
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~----------------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPT----------------TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp EECCCSSCEEEEEECSSCTT----------------EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred eccCCCCCEEEEEECCCCCC----------------EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC
Confidence 444666788888888886 4 44555778899999987552 247999999999999 78
Q ss_pred CEEEEEECCCeEEEEECCCCcEEEEecCC---CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCee
Q 036953 108 RTLASTHGDHTVKIIDCQTGNCLKVLSGH---RRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIA 183 (792)
Q Consensus 108 ~~LaSGS~DGtVrIWDl~tgk~v~~L~gH---~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~ 183 (792)
++|++++.|+.|++||+.+ +.+..+..| ...|.+++|+| ++++|++++.|+.|++||++ ++++..+ .|...|.
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVT 208 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEE
T ss_pred CEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEE
Confidence 9999999999999999985 556666544 48899999999 99999999999999999994 5666666 5889999
Q ss_pred EEEEcCCCc-EEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc-CCCeEEEEEee-----CccccCCCcee
Q 036953 184 SIAFHAEGE-LLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP-HAAPFVLTAEV-----NDLDSSDSSMT 255 (792)
Q Consensus 184 sVafSpdG~-~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP-dG~~LlaS~s~-----~dLrs~d~~~~ 255 (792)
+++|+|+++ +|++++ ++.|++||+++.+..........|...|++++|+| +++.|++++.+ |+++.......
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 999999998 888888 55699999988554332344557899999999999 99988877764 44444333333
Q ss_pred eecCCC---------c-----------ccC---------CCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCC
Q 036953 256 RATSPG---------Y-----------LRY---------PPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDS 306 (792)
Q Consensus 256 l~t~sg---------~-----------~~~---------p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDG 306 (792)
+..... . ..+ ....+.+|+..++..+....+ ..|...+..++|+|||
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~----~~~~~~~~~~~~s~~g 364 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRD----PNAAGIISLNKFSPTG 364 (383)
T ss_dssp EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECB----TTBCSCCCEEEECTTS
T ss_pred cccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecC----CCCCceEEEEEEecCc
Confidence 221110 0 001 123455666555555333321 1145677778999999
Q ss_pred cEEE
Q 036953 307 RIDL 310 (792)
Q Consensus 307 r~lv 310 (792)
++|+
T Consensus 365 ~~l~ 368 (383)
T 3ei3_B 365 DVLA 368 (383)
T ss_dssp SEEE
T ss_pred cEEE
Confidence 9999
No 35
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=1e-24 Score=230.55 Aligned_cols=246 Identities=13% Similarity=0.066 Sum_probs=181.6
Q ss_pred CCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcC--CCCE
Q 036953 38 SPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSP--DGRT 109 (792)
Q Consensus 38 s~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSP--DG~~ 109 (792)
..+...+.+++|+++++++ ++++.|++|++|+...+ .+.+|...|.+++|++ ++++
T Consensus 10 ~~H~~~V~~v~~s~~g~~l----------------asgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~ 73 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRL----------------ATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNI 73 (316)
T ss_dssp ----CCEEEEEECGGGCEE----------------EEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSC
T ss_pred ccccCeEEEeeEcCCCCEE----------------EEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCE
Confidence 3566788999998886644 55577888888887643 3679999999999986 4899
Q ss_pred EEEEECCCeEEEEECCCC--cEEEEecCCCCCcEEEEEccC-CCCEEEEEeCCCeEEEEECCCCcEE---EEe-ccCCCe
Q 036953 110 LASTHGDHTVKIIDCQTG--NCLKVLSGHRRTPWVVRFHPL-RSEILASGSLDHEVRLWDANTSECI---GSC-DFYRPI 182 (792)
Q Consensus 110 LaSGS~DGtVrIWDl~tg--k~v~~L~gH~~~VtsVafSP~-dg~lLaSgS~DgtVrLWDl~tg~~v---~t~-~h~s~V 182 (792)
|++|+.|++|+|||+.++ +.+..+.+|...|++++|+|+ ++.+|++++.|++|++||++++... ..+ .|...+
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v 153 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGC 153 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCB
T ss_pred EEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCc
Confidence 999999999999999887 467788899999999999993 1789999999999999999876422 222 477889
Q ss_pred eEEEEcCC-----------------CcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCC----CeEEE
Q 036953 183 ASIAFHAE-----------------GELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHA----APFVL 240 (792)
Q Consensus 183 ~sVafSpd-----------------G~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG----~~Lla 240 (792)
.+++|+|+ +++|++++ |+.|++||++..........+..|...|++++|+|++ ..|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEE
Confidence 99999997 46889888 4559999997553211122345688999999999987 55555
Q ss_pred EEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCC
Q 036953 241 TAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSS 320 (792)
Q Consensus 241 S~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg 320 (792)
++.+..++.|+ ..+..... .....+..|...|++++|+|+|++|+
T Consensus 234 ~s~D~~v~iw~-----------------------~~~~~~~~--~~~~~~~~~~~~v~~v~~sp~g~~la---------- 278 (316)
T 3bg1_A 234 CSQDGRVFIWT-----------------------CDDASSNT--WSPKLLHKFNDVVWHVSWSITANILA---------- 278 (316)
T ss_dssp EETTCEEEEEE-----------------------CSSTTCCC--CBCCEEEECSSCEEEEEECTTTCCEE----------
T ss_pred EcCCCeEEEEE-----------------------ccCccccc--hhhhhhhcCCCcEEEEEEcCCCCEEE----------
Confidence 55455444432 21100000 00011223778999999999999999
Q ss_pred CccccccccccccCCCCCcccccccccccc
Q 036953 321 NMQIEPSASLHLQSDSNVEQDGTVPSMETF 350 (792)
Q Consensus 321 ~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~ 350 (792)
+++.|++|.-|+..
T Consensus 279 ----------------s~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 279 ----------------VSGGDNKVTLWKES 292 (316)
T ss_dssp ----------------EEESSSCEEEEEEC
T ss_pred ----------------EEcCCCeEEEEEEC
Confidence 78899999999853
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=1.1e-23 Score=216.47 Aligned_cols=274 Identities=14% Similarity=0.077 Sum_probs=193.1
Q ss_pred eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC--------CcCCCCCCeEEEEEcC-
Q 036953 35 REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC--------PLVPPPRSTIAAAFSP- 105 (792)
Q Consensus 35 rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~--------~L~gH~~~V~sLafSP- 105 (792)
+.+..+...+.+++|++++++++ ++..|+.|++|+.... .+.+|...|.+++|+|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~----------------~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 68 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVA----------------TCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP 68 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEE----------------EEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG
T ss_pred ccCcccccceeEEEEcCCCCEEE----------------EeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC
Confidence 34456777899999999876554 4467788888887643 2358999999999999
Q ss_pred -CCCEEEEEECCCeEEEEECCCC---------cEEEEecCCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCcEE
Q 036953 106 -DGRTLASTHGDHTVKIIDCQTG---------NCLKVLSGHRRTPWVVRFHPLR--SEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 106 -DG~~LaSGS~DGtVrIWDl~tg---------k~v~~L~gH~~~VtsVafSP~d--g~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
|+++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+| + +++|++++.|++|++||+++++.+
T Consensus 69 ~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 69 EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHh
Confidence 6999999999999999999887 56788889999999999999 7 899999999999999999987644
Q ss_pred EEe--------------ccCCCeeEEEEcCC---CcEEEEEcCCe-EEEEECCCCCcccCCeEEecCCCCeEEEEEccCC
Q 036953 174 GSC--------------DFYRPIASIAFHAE---GELLAVASGHK-LYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHA 235 (792)
Q Consensus 174 ~t~--------------~h~s~V~sVafSpd---G~~LasgSdd~-V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG 235 (792)
..+ .+...+.+++|+|+ +.+|++++.++ +.+|+....+... ......|...|++++|+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV-AAKLPGHKSLIRSISWAPSI 226 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE-EEECCCCCSCEEEEEECCCS
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee-eeecCCCCcceeEEEECCCC
Confidence 322 35678999999997 88999998666 7666665554211 23345688999999999998
Q ss_pred ----CeEEEEEeeCccccCCCcee-----eecCCCccc---CCCCceEEEEec----CCCEEE-----EeeccCcccCCC
Q 036953 236 ----APFVLTAEVNDLDSSDSSMT-----RATSPGYLR---YPPPAVFVANAQ----SGDHVS-----LAAELPLMSSLP 294 (792)
Q Consensus 236 ----~~LlaS~s~~dLrs~d~~~~-----l~t~sg~~~---~p~~~~~l~~~s----sG~~~~-----l~s~l~~l~gh~ 294 (792)
+.|++++.+..++.|+.... ......... ............ ...... .......+.+|.
T Consensus 227 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 306 (351)
T 3f3f_A 227 GRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN 306 (351)
T ss_dssp SCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTS
T ss_pred CCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc
Confidence 55666665555555543321 100000000 000000000000 000000 001223456799
Q ss_pred ceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 295 FLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 295 ~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
..|.+++|+|+|++|+ +++.|++|.-|+...+
T Consensus 307 ~~v~~~~~s~~~~~l~--------------------------s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 307 GEVWSVSWNLTGTILS--------------------------SAGDDGKVRLWKATYS 338 (351)
T ss_dssp SCEEEEEECSSSCCEE--------------------------EEETTSCEEEEEECTT
T ss_pred ccEEEEEEcCCCCEEE--------------------------EecCCCcEEEEecCcC
Confidence 9999999999999999 8899999999998765
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=1.6e-23 Score=219.07 Aligned_cols=271 Identities=18% Similarity=0.180 Sum_probs=197.8
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----c-----CCCCCCeEEEEEcCC---
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----L-----VPPPRSTIAAAFSPD--- 106 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----L-----~gH~~~V~sLafSPD--- 106 (792)
.+...+.+++|+|+.. ++...++....++.|++|+..++. + ..|...|++++|+|+
T Consensus 16 ~h~~~v~~i~~~p~~~------------~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 83 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSK------------EGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNT 83 (366)
T ss_dssp TTCSCEEEEEECTTCC------------TTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTT
T ss_pred CCCCceEEEEEecccC------------CCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCC
Confidence 5667899999998621 223344444555577777766432 1 237788999999998
Q ss_pred -CCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe----ccCCC
Q 036953 107 -GRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC----DFYRP 181 (792)
Q Consensus 107 -G~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~----~h~s~ 181 (792)
+++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|.++++|++++.|++|++||+++++.+..+ .+...
T Consensus 84 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 84 SHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 6799999999999999999999999999999999999999977899999999999999999999998887 58899
Q ss_pred eeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccC-------------------------CeEEecCCCCeEEEEEccCC
Q 036953 182 IASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASS-------------------------PIIVLKTRRSLRAVHFHPHA 235 (792)
Q Consensus 182 V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~-------------------------~~~~~~h~~sVtsVafSPdG 235 (792)
|.+++|+|++++|++++ ++.|++||+++.+.... ......|...|.+++|+ +
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 99999999999999998 45599999987653210 00112278899999999 6
Q ss_pred CeEEEEEeeCccccCC-----C--------------ceeeecCCC---cccCCCC--ceEEEEecCCCEEEEeeccC---
Q 036953 236 APFVLTAEVNDLDSSD-----S--------------SMTRATSPG---YLRYPPP--AVFVANAQSGDHVSLAAELP--- 288 (792)
Q Consensus 236 ~~LlaS~s~~dLrs~d-----~--------------~~~l~t~sg---~~~~p~~--~~~l~~~ssG~~~~l~s~l~--- 288 (792)
+.+++++.+..++.|+ . ...+..... ...+.+. ...++.+..+..+.++.-..
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 6666665544333332 2 011111111 2233333 44555555545555544111
Q ss_pred ------cccCC--CceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccc
Q 036953 289 ------LMSSL--PFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 289 ------~l~gh--~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
.+.+| ...|++++|+|+|++|+ +++.|++|.-||.
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~--------------------------s~~~dg~i~iwd~ 364 (366)
T 3k26_A 322 HKAKCTTLTHHKCGAAIRQTSFSRDSSILI--------------------------AVCDDASIWRWDR 364 (366)
T ss_dssp GGCEEEEECCTTCCSCEEEEEECTTSSEEE--------------------------EEETTSEEEEEEC
T ss_pred ccccceEEcccccCCceEEEEeCCCCCeEE--------------------------EEeCCCEEEEEEe
Confidence 45556 79999999999999999 7888888888875
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=6.7e-23 Score=230.50 Aligned_cols=295 Identities=20% Similarity=0.291 Sum_probs=222.7
Q ss_pred CCCceEeeecccc--eeeCCCCceeeeEEeeCCCceEeecCCCcee--e-----------------------cCCcEEEE
Q 036953 22 RRRARNVSRLLAH--REISPKTKYVPKRQWVDASKLKTCGPSDSSV--R-----------------------DAKRGLVS 74 (792)
Q Consensus 22 ~s~~r~V~~l~~~--rels~~tk~V~s~aWspd~~lla~G~~a~sv--~-----------------------d~~~~L~S 74 (792)
..+.+.+|+...+ +.+..+...+..++|++++.+++++..+..+ + ..+..+++
T Consensus 200 ~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~ 279 (577)
T 2ymu_A 200 DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIAS 279 (577)
T ss_dssp TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 4566888875433 2333566778899999998876665433322 1 12345778
Q ss_pred EeCCCeEEEEeccCC---CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC
Q 036953 75 WVEAESLRHLSAKYC---PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE 151 (792)
Q Consensus 75 ~s~d~sIrvWd~~t~---~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~ 151 (792)
+..++.+++|+.... .+.+|...|.+++|+|+++.|++++.|++|++||+. ++.+..+.+|...|.+++|+| +++
T Consensus 280 ~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~-~g~ 357 (577)
T 2ymu_A 280 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSP-DGQ 357 (577)
T ss_dssp EETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECT-TSS
T ss_pred EeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECC-CCC
Confidence 889999999997644 467899999999999999999999999999999976 455778889999999999999 999
Q ss_pred EEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEE
Q 036953 152 ILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAV 229 (792)
Q Consensus 152 lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsV 229 (792)
+|++++.|++|++||. +++.+..+ .|...|.+++|+|++++|++++. +.|++||... +. ......|...|+++
T Consensus 358 ~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-~~---~~~~~~~~~~v~~~ 432 (577)
T 2ymu_A 358 TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QL---LQTLTGHSSSVWGV 432 (577)
T ss_dssp EEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-CE---EEEEECCSSCEEEE
T ss_pred EEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-CE---EEEecCCCCCeEEE
Confidence 9999999999999996 45666665 58899999999999999999985 4599999643 32 23456789999999
Q ss_pred EEccCCCeEEEEEeeCccccCCCc----eeeecCCC---cccCCCCceEEEEecCCCEEEEee----ccCcccCCCceEE
Q 036953 230 HFHPHAAPFVLTAEVNDLDSSDSS----MTRATSPG---YLRYPPPAVFVANAQSGDHVSLAA----ELPLMSSLPFLIV 298 (792)
Q Consensus 230 afSPdG~~LlaS~s~~dLrs~d~~----~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s----~l~~l~gh~~~Vw 298 (792)
+|+|+++.+++++.+..+..|+.. ..+..... ...+.+....++.+..+..+.++. ....+.+|...|.
T Consensus 433 ~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 433 AFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR 512 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEE
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEE
Confidence 999999988877776655544322 12222221 233444555555555555555554 1234567999999
Q ss_pred EeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccc
Q 036953 299 PSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 299 dV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
+++|+|||++|+ +++.|++|.-||.
T Consensus 513 ~l~~s~dg~~l~--------------------------s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 513 GVAFSPDGQTIA--------------------------SASDDKTVKLWNR 537 (577)
T ss_dssp EEEECTTSSCEE--------------------------EEETTSEEEEECT
T ss_pred EEEEcCCCCEEE--------------------------EEECcCEEEEEeC
Confidence 999999999999 7889999999984
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=1e-22 Score=210.52 Aligned_cols=237 Identities=11% Similarity=0.094 Sum_probs=191.4
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----c-----CCCCCCeEEEEEcCCCCE
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----L-----VPPPRSTIAAAFSPDGRT 109 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----L-----~gH~~~V~sLafSPDG~~ 109 (792)
.+...+..+.|+++++++++ +. ++.+++|+..... + .+|...|.+++|+|++++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~----------------~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 111 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYT----------------GG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT 111 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEE----------------EC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE
T ss_pred cCCCceEEEEEecCCcEEEE----------------cC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE
Confidence 35556778888877665433 34 6788899886542 1 278899999999999999
Q ss_pred EEEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEE
Q 036953 110 LASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIA 186 (792)
Q Consensus 110 LaSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVa 186 (792)
|++++.|+.|++||+.+++ ....+..|...|.+++|+| +++++++++.|+.|++||+++++.+..+. |...+.+++
T Consensus 112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence 9999999999999999887 6677889999999999999 99999999999999999999999888885 788999999
Q ss_pred EcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccC
Q 036953 187 FHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRY 265 (792)
Q Consensus 187 fSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~ 265 (792)
|+|++++|++++ ++.|++||+++.+.. ....+...+.+++|+|+++.+++++.+..
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~~~~------------------- 247 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLREGRQL----QQHDFTSQIFSLGYCPTGEWLAVGMESSN------------------- 247 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEE----EEEECSSCEEEEEECTTSSEEEEEETTSC-------------------
T ss_pred ECCCCCEEEEEecCCcEEEEECCCCceE----eeecCCCceEEEEECCCCCEEEEEcCCCc-------------------
Confidence 999999999998 556999999887643 34567888999999999998877664433
Q ss_pred CCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccc
Q 036953 266 PPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVP 345 (792)
Q Consensus 266 p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~ 345 (792)
+.+|....+.... +..|...|.++.|+|+|++++ +++.|++|.
T Consensus 248 ----i~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~--------------------------~~~~dg~i~ 290 (337)
T 1gxr_A 248 ----VEVLHVNKPDKYQ-------LHLHESCVLSLKFAYCGKWFV--------------------------STGKDNLLN 290 (337)
T ss_dssp ----EEEEETTSSCEEE-------ECCCSSCEEEEEECTTSSEEE--------------------------EEETTSEEE
T ss_pred ----EEEEECCCCCeEE-------EcCCccceeEEEECCCCCEEE--------------------------EecCCCcEE
Confidence 3334433433322 234888999999999999999 677888999
Q ss_pred cccccCCC
Q 036953 346 SMETFPVI 353 (792)
Q Consensus 346 p~~~~~~~ 353 (792)
-|+...++
T Consensus 291 ~~~~~~~~ 298 (337)
T 1gxr_A 291 AWRTPYGA 298 (337)
T ss_dssp EEETTTCC
T ss_pred EEECCCCe
Confidence 99876653
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=225.25 Aligned_cols=208 Identities=20% Similarity=0.338 Sum_probs=167.7
Q ss_pred CcCCCCC-CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE--E-EecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEE
Q 036953 90 PLVPPPR-STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL--K-VLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLW 165 (792)
Q Consensus 90 ~L~gH~~-~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v--~-~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLW 165 (792)
++.+|.. .|.+++|+|+|++|++|+.|++|+|||+.+++.. . ...+|...|.+++|+| ++++|++++.|++|++|
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIW 88 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEE
Confidence 4567887 8999999999999999999999999999887643 2 2368999999999999 99999999999999999
Q ss_pred ECCCCc--EEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 166 DANTSE--CIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 166 Dl~tg~--~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
|+.++. ++..+ .|...|.+++|+|++++|++++. +.|++||++.............|...|++++|+|+++.|+++
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE
Confidence 998764 45555 58899999999999999999995 459999998775433223455688999999999999977777
Q ss_pred EeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCC
Q 036953 242 AEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSN 321 (792)
Q Consensus 242 ~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~ 321 (792)
+.+..+ .+|....+...... .+.+|...|++++|+|+|++|+
T Consensus 169 s~d~~i-----------------------~~w~~~~~~~~~~~----~~~~h~~~v~~l~~sp~g~~l~----------- 210 (345)
T 3fm0_A 169 SYDDTV-----------------------KLYREEEDDWVCCA----TLEGHESTVWSLAFDPSGQRLA----------- 210 (345)
T ss_dssp ETTSCE-----------------------EEEEEETTEEEEEE----EECCCSSCEEEEEECTTSSEEE-----------
T ss_pred eCCCcE-----------------------EEEEecCCCEEEEE----EecCCCCceEEEEECCCCCEEE-----------
Confidence 655433 33443333322211 2456999999999999999999
Q ss_pred ccccccccccccCCCCCccccccccccccC
Q 036953 322 MQIEPSASLHLQSDSNVEQDGTVPSMETFP 351 (792)
Q Consensus 322 v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~ 351 (792)
+++.|++|.-|+...
T Consensus 211 ---------------s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 211 ---------------SCSDDRTVRIWRQYL 225 (345)
T ss_dssp ---------------EEETTSCEEEEEEEC
T ss_pred ---------------EEeCCCeEEEecccc
Confidence 899999999998643
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=5.6e-24 Score=230.44 Aligned_cols=272 Identities=15% Similarity=0.165 Sum_probs=204.6
Q ss_pred CCCCCCCceEeeecccceeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC--------
Q 036953 18 SNHLRRRARNVSRLLAHREISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC-------- 89 (792)
Q Consensus 18 ~~s~~s~~r~V~~l~~~rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-------- 89 (792)
+-.+.++++++|....+++.+.....+....|+.+. ++... +....++++..++.|++|+....
T Consensus 4 ~~~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~ 75 (402)
T 2aq5_A 4 QVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGF--CAVNP------KFMALICEASGGGAFLVLPLGKTGRVDKNVP 75 (402)
T ss_dssp ----CCTTTTCEEEECCGGGSEESCCBCCCCCSSCS--EEECS------SEEEEEBCCSSSCCEEEEETTCCEECCTTCC
T ss_pred cccCCCCCccccCcCCChhhcEecceeecCccCCCc--EEECC------CeEEEEEEEcCCCEEEEEECccCCCCCCCCc
Confidence 445789999999999988888777777777776552 22221 11123344577899999997432
Q ss_pred CcCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCC-------cEEEEecCCCCCcEEEEEccCCC-CEEEEEeCCC
Q 036953 90 PLVPPPRSTIAAAFSP-DGRTLASTHGDHTVKIIDCQTG-------NCLKVLSGHRRTPWVVRFHPLRS-EILASGSLDH 160 (792)
Q Consensus 90 ~L~gH~~~V~sLafSP-DG~~LaSGS~DGtVrIWDl~tg-------k~v~~L~gH~~~VtsVafSP~dg-~lLaSgS~Dg 160 (792)
.+.+|...|++++|+| ++++|++|+.||+|+|||+.++ +.+..+.+|...|.+++|+| ++ ++|++++.|+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCCC
Confidence 3678999999999999 9999999999999999999987 66888999999999999999 65 7999999999
Q ss_pred eEEEEECCCCcEEEEe---ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEE-ecCCCC-eEEEEEccC
Q 036953 161 EVRLWDANTSECIGSC---DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIV-LKTRRS-LRAVHFHPH 234 (792)
Q Consensus 161 tVrLWDl~tg~~v~t~---~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~-~~h~~s-VtsVafSPd 234 (792)
+|++||+++++++..+ .|...|.+++|+|++++|++++ ++.|++||+++++... .. ..|... +..+.|+|+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA---EKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE---EEECSSCSSSCCEEEECST
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee---eeccCCCCCcceEEEEcCC
Confidence 9999999999999888 3888999999999999999998 5569999999877432 33 355554 899999999
Q ss_pred CCeEEEEE---eeCccccCCCceeeecCCCcccCCCCceEEEEecCCCE-EEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 235 AAPFVLTA---EVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDH-VSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 235 G~~LlaS~---s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~-~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
++.++++. .+. .+.+|+...+.. ..... + .+...|..++|+|||++++
T Consensus 232 ~~~l~~g~~~~~d~-----------------------~i~iwd~~~~~~~~~~~~----~-~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 232 GKILTTGFSRMSER-----------------------QVALWDTKHLEEPLSLQE----L-DTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp TEEEEEEECTTCCE-----------------------EEEEEETTBCSSCSEEEE----C-CCCSSCEEEEEETTTTEEE
T ss_pred CcEEEEeccCCCCc-----------------------eEEEEcCccccCCceEEe----c-cCCCceeEEEEcCCCCEEE
Confidence 88555542 222 233344333222 11111 1 2566788999999999886
Q ss_pred EccccccCCCCccccccccccccCCCCCccccccccccccCCCC
Q 036953 311 QHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 311 ~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
.+++.|.+|.-|+...++|
T Consensus 284 -------------------------~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 284 -------------------------LCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp -------------------------EEETTCSCEEEEEECSSTT
T ss_pred -------------------------EEEcCCCeEEEEEecCCCc
Confidence 1456688888888877765
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-23 Score=218.42 Aligned_cols=249 Identities=13% Similarity=0.085 Sum_probs=190.0
Q ss_pred eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcCC--CC
Q 036953 37 ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSPD--GR 108 (792)
Q Consensus 37 ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSPD--G~ 108 (792)
+..+...+.+++|++++++++++ ..|+.|++|+.... .+.+|...|.+++|+++ ++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~----------------~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATC----------------SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEE----------------ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS
T ss_pred ecCCcccEEEEEEcCCCCEEEEE----------------ECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCC
Confidence 33566788999999987755444 56777778877522 46789999999999986 99
Q ss_pred EEEEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCcE---EEEeccCCC
Q 036953 109 TLASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLR--SEILASGSLDHEVRLWDANTSEC---IGSCDFYRP 181 (792)
Q Consensus 109 ~LaSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~d--g~lLaSgS~DgtVrLWDl~tg~~---v~t~~h~s~ 181 (792)
+|++++.|+.|++||+.+++ .+..+.+|...|.+++|+| + +++|++++.|++|++||++++.. .....+...
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence 99999999999999999987 7788889999999999999 7 89999999999999999998732 223368899
Q ss_pred eeEEEEcC-------------CCcEEEEEc-CCeEEEEECCCCCcccCC-eEEecCCCCeEEEEEccC---CCeEEEEEe
Q 036953 182 IASIAFHA-------------EGELLAVAS-GHKLYIWPYNNKEEASSP-IIVLKTRRSLRAVHFHPH---AAPFVLTAE 243 (792)
Q Consensus 182 V~sVafSp-------------dG~~LasgS-dd~V~IWDlrt~~~~~~~-~~~~~h~~sVtsVafSPd---G~~LlaS~s 243 (792)
|.+++|+| ++++|++++ ++.|++||++........ .....|...|++++|+|+ ++.+++++.
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 99999999 689999998 455999999876643212 234558899999999999 676666654
Q ss_pred eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCcc
Q 036953 244 VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQ 323 (792)
Q Consensus 244 ~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~ 323 (792)
+..+ .+|....+...... .......|...|++++|+|||++|+
T Consensus 230 dg~i-----------------------~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~------------- 272 (379)
T 3jrp_A 230 DRTC-----------------------IIWTQDNEQGPWKK-TLLKEEKFPDVLWRASWSLSGNVLA------------- 272 (379)
T ss_dssp TSCE-----------------------EEEEESSTTSCCEE-EESSSSCCSSCEEEEEECSSSCCEE-------------
T ss_pred CCEE-----------------------EEEeCCCCCcccee-eeeccccCCCcEEEEEEcCCCCEEE-------------
Confidence 4433 33443333210000 0111234888999999999999998
Q ss_pred ccccccccccCCCCCccccccccccccCC
Q 036953 324 IEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 324 ~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-|+...+
T Consensus 273 -------------~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 273 -------------LSGGDNKVTLWKENLE 288 (379)
T ss_dssp -------------EEESSSSEEEEEEEET
T ss_pred -------------EecCCCcEEEEeCCCC
Confidence 6677888888886643
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=1.2e-22 Score=220.55 Aligned_cols=259 Identities=14% Similarity=0.152 Sum_probs=202.4
Q ss_pred CCCceEeeecccceeeC----CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCC
Q 036953 22 RRRARNVSRLLAHREIS----PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVP 93 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels----~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~g 93 (792)
..+.+.+|+....+... .+...+..++|++++.++ +++..++.|++|+..++ .+.+
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l----------------~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFL----------------SVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEE----------------EEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEE----------------EEECCCCeEEEEECcCCeEEEEecC
Confidence 34567778776554332 234567777887776544 44566788888888755 3568
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECC-CCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQ-TGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~-tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
|...|.+++| +++.|++++.|+.|++||+. .+..+..+.+|.+.|.+++|+| ++++|++++.|++|++||++++++
T Consensus 175 ~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 175 HQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSE
T ss_pred CCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCc
Confidence 9999999999 56899999999999999998 5667888999999999999999 999999999999999999999998
Q ss_pred EEEe-ccCCCeeEEEEcCCC-cEEEEEc---CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCcc
Q 036953 173 IGSC-DFYRPIASIAFHAEG-ELLAVAS---GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDL 247 (792)
Q Consensus 173 v~t~-~h~s~V~sVafSpdG-~~LasgS---dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dL 247 (792)
+..+ .+...|.+++|+|++ .++++++ ++.|++||+++++.. ....+...|++++|+|+++.++++++..
T Consensus 252 ~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~g~~-- 325 (401)
T 4aez_A 252 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV----NTVDAGSQVTSLIWSPHSKEIMSTHGFP-- 325 (401)
T ss_dssp EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE----EEEECSSCEEEEEECSSSSEEEEEECTT--
T ss_pred cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE----EEEeCCCcEEEEEECCCCCeEEEEeecC--
Confidence 8887 588999999999977 5666664 566999999987643 3445778899999999999888766321
Q ss_pred ccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCcccccc
Q 036953 248 DSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPS 327 (792)
Q Consensus 248 rs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s 327 (792)
...+.+|...++....... +.+|...|.++.|+|||++|+
T Consensus 326 -------------------dg~i~v~~~~~~~~~~~~~----~~~h~~~v~~~~~s~dg~~l~----------------- 365 (401)
T 4aez_A 326 -------------------DNNLSIWSYSSSGLTKQVD----IPAHDTRVLYSALSPDGRILS----------------- 365 (401)
T ss_dssp -------------------TCEEEEEEEETTEEEEEEE----EECCSSCCCEEEECTTSSEEE-----------------
T ss_pred -------------------CCcEEEEecCCccceeEEE----ecCCCCCEEEEEECCCCCEEE-----------------
Confidence 1235555555544433322 345889999999999999999
Q ss_pred ccccccCCCCCccccccccccccCCCC
Q 036953 328 ASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 328 ~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
+++.|.+|.-|++..++.
T Consensus 366 ---------s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 366 ---------TAASDENLKFWRVYDGDH 383 (401)
T ss_dssp ---------EECTTSEEEEEECCC---
T ss_pred ---------EEeCCCcEEEEECCCCcc
Confidence 788999999999988754
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=7.1e-24 Score=225.59 Aligned_cols=194 Identities=12% Similarity=0.146 Sum_probs=147.2
Q ss_pred CCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcCCCCEEEEE
Q 036953 40 KTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSPDGRTLAST 113 (792)
Q Consensus 40 ~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSPDG~~LaSG 113 (792)
....+.+++|+|++++++++ ..|+.|++|+...+ .+.+|...|.+++|+|++++|+++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~----------------~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 73 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTT----------------TATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTC 73 (377)
T ss_dssp CSSCCSCCEECSSSSEEECC----------------CSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEE
T ss_pred CCCcEEEEEECCCCCEEEEe----------------cCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEE
Confidence 34578899999998877666 34556666665543 467899999999999999999999
Q ss_pred ECCCeEEEEECCCCc---EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE---EEEe-c-cCCCeeEE
Q 036953 114 HGDHTVKIIDCQTGN---CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC---IGSC-D-FYRPIASI 185 (792)
Q Consensus 114 S~DGtVrIWDl~tgk---~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~---v~t~-~-h~s~V~sV 185 (792)
+.|++|+|||+.+++ ....+.+|...|++++|+| ++++|++++.|++|++||+++++. ...+ . |...|.++
T Consensus 74 s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp ETTSSEEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 999999999999877 6778889999999999999 999999999999999999998763 4555 3 88999999
Q ss_pred EEcCCCcEEEEEcC-CeEEEEECCCCCcc--------------cCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 186 AFHAEGELLAVASG-HKLYIWPYNNKEEA--------------SSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 186 afSpdG~~LasgSd-d~V~IWDlrt~~~~--------------~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
+|+|++++|++++. +.|++||++..+.. ........|...|++++|+|++++|++++.+..++.|
T Consensus 153 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 153 DWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp EECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred EEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 99999999999984 55999999643211 0011222788899999999999988887765555444
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=3.3e-23 Score=223.20 Aligned_cols=265 Identities=15% Similarity=0.147 Sum_probs=190.4
Q ss_pred CCceEeeecccceeeCCC-C-ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCC
Q 036953 23 RRARNVSRLLAHREISPK-T-KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPR 96 (792)
Q Consensus 23 s~~r~V~~l~~~rels~~-t-k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~ 96 (792)
.+...+|+....+..... . .......|+++++ .++++..++.|++|+...+ .+.+|..
T Consensus 77 d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~ 140 (420)
T 3vl1_A 77 DGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMR----------------RFILGTTEGDIKVLDSNFNLQREIDQAHVS 140 (420)
T ss_dssp TTEEEEEECCSEETTTTSCSCCEEEEEEECSSSC----------------EEEEEETTSCEEEECTTSCEEEEETTSSSS
T ss_pred CCcEEEEEecccceeeEEecCCceEEEEEecCCC----------------EEEEEECCCCEEEEeCCCcceeeecccccC
Confidence 456778877655443321 1 1222223444443 4566678899999998765 3468999
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC 176 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~ 176 (792)
.|.+++|+|++++|++++.|++|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||+++++++..+
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEe
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999988887
Q ss_pred c----cCCC---------------------eeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEE
Q 036953 177 D----FYRP---------------------IASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVH 230 (792)
Q Consensus 177 ~----h~s~---------------------V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVa 230 (792)
. +... +.+++|+|++++|++++. +.|++||+++.+... .....|...|++++
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~ 297 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLT 297 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEE
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE--EcccccCCCceeEE
Confidence 4 3334 444556789999999984 459999998877432 22234778999999
Q ss_pred EccCCC-eEEEEEe-----eCccccCCC-ceeeecCCC----cccCCCCceEEEEecCCCEEEEee-c------------
Q 036953 231 FHPHAA-PFVLTAE-----VNDLDSSDS-SMTRATSPG----YLRYPPPAVFVANAQSGDHVSLAA-E------------ 286 (792)
Q Consensus 231 fSPdG~-~LlaS~s-----~~dLrs~d~-~~~l~t~sg----~~~~p~~~~~l~~~ssG~~~~l~s-~------------ 286 (792)
|+|+++ .+++++. .|+++.... ...+....+ ...++ +...++.+..+..+.++. .
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 376 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFE 376 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTT
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceecc
Confidence 999999 6665555 444444333 222322111 12223 233444444444555444 1
Q ss_pred -cCcccCCCceEEEeEECCCCc
Q 036953 287 -LPLMSSLPFLIVPSVSIDDSR 307 (792)
Q Consensus 287 -l~~l~gh~~~VwdV~~SpDGr 307 (792)
...+..|...|.+++|+|||+
T Consensus 377 ~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 377 TPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp SCEEECCSSCCCCEEEEECCSS
T ss_pred CccEEccCCcceEEEEEccCCC
Confidence 113456788899999999999
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3e-24 Score=246.41 Aligned_cols=287 Identities=8% Similarity=-0.021 Sum_probs=200.6
Q ss_pred CCCCceEeeeccccee-------eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----
Q 036953 21 LRRRARNVSRLLAHRE-------ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---- 89 (792)
Q Consensus 21 ~~s~~r~V~~l~~~re-------ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---- 89 (792)
...+.+++|+....+. +..+...+..++|+|++.. ......|++++.|++|++|+....
T Consensus 180 s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~----------~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 180 KHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHA----------PHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp --CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCC----------SSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred CCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCC----------CCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 3556788998765432 2233456888999987420 012356788899999999998643
Q ss_pred -----------CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc-EEEEecCCCCCcEEE--EEccCCC-CEEE
Q 036953 90 -----------PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN-CLKVLSGHRRTPWVV--RFHPLRS-EILA 154 (792)
Q Consensus 90 -----------~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk-~v~~L~gH~~~VtsV--afSP~dg-~lLa 154 (792)
.+.+|...|++++|+++ ..|++|+.||+|++||+.+++ +...+.+|...|+++ .|+| ++ ++|+
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~la 327 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVS 327 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEE
Confidence 34678999999999986 489999999999999998764 456788999999999 4677 66 8999
Q ss_pred EEeCCCeEEEEECCCCcEEEEec-cC--CCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEE
Q 036953 155 SGSLDHEVRLWDANTSECIGSCD-FY--RPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVH 230 (792)
Q Consensus 155 SgS~DgtVrLWDl~tg~~v~t~~-h~--s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVa 230 (792)
|++.|++|+|||+++++++..+. +. ..+.+++|+|+++.|+++++ +.|++||+++.... ..+.+|...|++|+
T Consensus 328 S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~---~~l~gH~~~V~sva 404 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV---HPLVSRETTITAIG 404 (524)
T ss_dssp EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC---EEEEECSSCEEEEE
T ss_pred EeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc---eeeecCCCceEEEE
Confidence 99999999999999887665552 33 35789999999999998884 55999999987653 34667999999999
Q ss_pred EccCCCeEEEEEeeCccccCCCceee-ecCCC-----------cccCCCCceEEEEecCCCEEE----EeeccCcccCCC
Q 036953 231 FHPHAAPFVLTAEVNDLDSSDSSMTR-ATSPG-----------YLRYPPPAVFVANAQSGDHVS----LAAELPLMSSLP 294 (792)
Q Consensus 231 fSPdG~~LlaS~s~~dLrs~d~~~~l-~t~sg-----------~~~~p~~~~~l~~~ssG~~~~----l~s~l~~l~gh~ 294 (792)
|+|+++.|++++.+..++.|+....+ ....+ .+.+.+....+.. .++-.+. -...+..+.+|.
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~~~~~~~~~~~g~~~~~l~gh~ 483 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DSSYEVYPLTVNDVSKAKIDAHG 483 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE-CCCCCCCC-------------CC
T ss_pred eCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc-cCCceecccccCCcceeeecCCC
Confidence 99999988888777778776643211 11000 1112221111111 0100000 011234566799
Q ss_pred ceEEEeEECCCCc---EEEEccccccCCCCccccccccccccCCCCCccccccccccc
Q 036953 295 FLIVPSVSIDDSR---IDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 295 ~~VwdV~~SpDGr---~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
..|++|+|+|+|. +++ +|+.|.+|.-|+.
T Consensus 484 ~~V~~Vafsp~~~~~~~lA--------------------------sg~~~g~vrlw~l 515 (524)
T 2j04_B 484 INITCTKWNETSAGGKCYA--------------------------FSNSAGLLTLEYL 515 (524)
T ss_dssp CSCCCEEECCSTTTTTEEE--------------------------EECTTSEEEEEEC
T ss_pred ceEEEEECCCCCCccHHHH--------------------------hhccCceEEEEEc
Confidence 9999999999964 888 7788888888873
No 47
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.92 E-value=1.4e-23 Score=227.36 Aligned_cols=230 Identities=16% Similarity=0.202 Sum_probs=185.3
Q ss_pred CCCCceEeeecccceee---CCCCceeeeEEeeCCCceEeecCCCceee-------------------------------
Q 036953 21 LRRRARNVSRLLAHREI---SPKTKYVPKRQWVDASKLKTCGPSDSSVR------------------------------- 66 (792)
Q Consensus 21 ~~s~~r~V~~l~~~rel---s~~tk~V~s~aWspd~~lla~G~~a~sv~------------------------------- 66 (792)
...+.+++|+....+.. ..+...+..++|+|+++++++|..+..+.
T Consensus 85 s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 85 SQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred eCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 35678999998665443 35666789999999999988876443321
Q ss_pred ---cCCcEEEEEeCCCeEEEEeccCCCc---------CCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECC-CCcEEEE
Q 036953 67 ---DAKRGLVSWVEAESLRHLSAKYCPL---------VPPPRSTIAAAFSP-DGRTLASTHGDHTVKIIDCQ-TGNCLKV 132 (792)
Q Consensus 67 ---d~~~~L~S~s~d~sIrvWd~~t~~L---------~gH~~~V~sLafSP-DG~~LaSGS~DGtVrIWDl~-tgk~v~~ 132 (792)
+.+..+++++.|++|++||..+++. .+|...|.+++|++ +++.|++|+.|++|++||+. .++.+..
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT 244 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 1234689999999999999986631 57999999999987 89999999999999999997 4577889
Q ss_pred ecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC--------CCeeEEEEcCCCcEEEEEcC-CeEE
Q 036953 133 LSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFY--------RPIASIAFHAEGELLAVASG-HKLY 203 (792)
Q Consensus 133 L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~--------s~V~sVafSpdG~~LasgSd-d~V~ 203 (792)
+.+|.+.|++++|+| ++++|++++.|++|++||+++++++..+... ..+.+++|+|+|++|++++. +.|+
T Consensus 245 ~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 245 YHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp ECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred ECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 999999999999999 9999999999999999999999988877421 24899999999999999984 4599
Q ss_pred EEECCCCCcccCCe-EEecCCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 204 IWPYNNKEEASSPI-IVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 204 IWDlrt~~~~~~~~-~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
+||+...+...... ....|...|++++|+|+|+.|++++.+..++.|+
T Consensus 324 vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 324 VWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp EEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 99998876432110 1145889999999999999777766666555543
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=4.9e-23 Score=216.91 Aligned_cols=271 Identities=12% Similarity=0.069 Sum_probs=196.1
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcCCCCEEEE
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSPDGRTLAS 112 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSPDG~~LaS 112 (792)
.+...+.+++|++++++++++ ..++.|++|+...+ .+.+|...|.+++|+|++++|++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~----------------~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 69 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAIC----------------PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 69 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEE----------------CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEE----------------eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEE
Confidence 355678999999998766554 45666777766544 24589999999999999999999
Q ss_pred EECCCeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE---EEEe--ccCCCeeEE
Q 036953 113 THGDHTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC---IGSC--DFYRPIASI 185 (792)
Q Consensus 113 GS~DGtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~---v~t~--~h~s~V~sV 185 (792)
++.|+.|++||+.+++.... +..|...|.+++|+| ++++|++++.|+.|++||++.++. ...+ .|...|.++
T Consensus 70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 99999999999988875444 467999999999999 899999999999999999998763 2333 478899999
Q ss_pred EEcCCCcEEEEEc-CCeEEEEECCCCC---------------cccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccc-
Q 036953 186 AFHAEGELLAVAS-GHKLYIWPYNNKE---------------EASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLD- 248 (792)
Q Consensus 186 afSpdG~~LasgS-dd~V~IWDlrt~~---------------~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLr- 248 (792)
+|+|++++|++++ ++.|++||++... ..........|...|++++|+|+++.+++++.+..++
T Consensus 149 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 228 (372)
T 1k8k_C 149 DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL 228 (372)
T ss_dssp EECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEE
Confidence 9999999999998 5559999975221 0011123346788999999999999888777644444
Q ss_pred ----cCCCceeeecCCC---cccCCCCceEEEEecCCCEEEEeec-----------------------------------
Q 036953 249 ----SSDSSMTRATSPG---YLRYPPPAVFVANAQSGDHVSLAAE----------------------------------- 286 (792)
Q Consensus 249 ----s~d~~~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s~----------------------------------- 286 (792)
.......+..... ...|.+....++.+.++..+.+...
T Consensus 229 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1k8k_C 229 ADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 308 (372)
T ss_dssp EEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred EECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccc
Confidence 3333333333222 2233334444555443333222221
Q ss_pred ----------cCcccCCCceEEEeE-ECCCC---cEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 287 ----------LPLMSSLPFLIVPSV-SIDDS---RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 287 ----------l~~l~gh~~~VwdV~-~SpDG---r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
.....+|...|.+++ ++++| ++|+ +++.|++|.-|+.-.+
T Consensus 309 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~--------------------------s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 309 ASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC--------------------------TTGMDGGMSIWDVRSL 362 (372)
T ss_dssp C---------CCCSSSSSSCEEEEEEEESTTTSCSEEE--------------------------EEETTSEEEEEEHHHH
T ss_pred cccccCccccccccccccCCcceeEEecCCCcceeeEE--------------------------EecCCCceEEEEecCh
Confidence 122347999999997 45777 8888 8999999999997654
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.92 E-value=1.3e-23 Score=227.63 Aligned_cols=246 Identities=14% Similarity=0.095 Sum_probs=182.5
Q ss_pred CCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC-------------CcCCCCCCeEEEEEcCC
Q 036953 40 KTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC-------------PLVPPPRSTIAAAFSPD 106 (792)
Q Consensus 40 ~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-------------~L~gH~~~V~sLafSPD 106 (792)
....+.++.|+.+ .+.+|. .+....++++..++.+|+|+.... ....+...+.+++||||
T Consensus 72 ~~~~v~s~~~~~~--~~~~g~-----~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 72 NDDSPTAIDASKG--IILVGC-----NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp TSCCCCEEEEETT--EEEEEC-----CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred CCCceEEEEeCCC--EEEEEE-----CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 3344556655544 333332 133445666667777888876432 22345667999999999
Q ss_pred CCEEEEEE--CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe---ccCCC
Q 036953 107 GRTLASTH--GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC---DFYRP 181 (792)
Q Consensus 107 G~~LaSGS--~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~---~h~s~ 181 (792)
|+++++++ .|++|+|||+.+++++..+. |.+.|.+++|+| +++++++++.| .+++|+..+++.+... .+...
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCC
Confidence 99987654 68999999999999998886 788899999999 99999999855 5677777777665443 46778
Q ss_pred eeEEEEcCCCcEEEEEc-CC----eEEEEECCCCCcccC-CeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCcee
Q 036953 182 IASIAFHAEGELLAVAS-GH----KLYIWPYNNKEEASS-PIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMT 255 (792)
Q Consensus 182 V~sVafSpdG~~LasgS-dd----~V~IWDlrt~~~~~~-~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~ 255 (792)
|.+++|+|+++++++++ ++ .+++||+........ ......|...|++++|+|+|++|++++.+.
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~---------- 291 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN---------- 291 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS----------
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC----------
Confidence 99999999999999987 33 378888876653221 123456888999999999999777666544
Q ss_pred eecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCC
Q 036953 256 RATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSD 335 (792)
Q Consensus 256 l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~ 335 (792)
.+.+|+..++..+... ..+|...|++++|||||++|+
T Consensus 292 -------------~V~iwd~~~~~~~~~~-----~~gH~~~V~~v~fSpdg~~la------------------------- 328 (365)
T 4h5i_A 292 -------------SIALVKLKDLSMSKIF-----KQAHSFAITEVTISPDSTYVA------------------------- 328 (365)
T ss_dssp -------------CEEEEETTTTEEEEEE-----TTSSSSCEEEEEECTTSCEEE-------------------------
T ss_pred -------------EEEEEECCCCcEEEEe-----cCcccCCEEEEEECCCCCEEE-------------------------
Confidence 3555666665554322 346999999999999999999
Q ss_pred CCCccccccccccc
Q 036953 336 SNVEQDGTVPSMET 349 (792)
Q Consensus 336 ~sgs~D~tv~p~~~ 349 (792)
++|.|+||.-|++
T Consensus 329 -S~S~D~tvrvw~i 341 (365)
T 4h5i_A 329 -SVSAANTIHIIKL 341 (365)
T ss_dssp -EEETTSEEEEEEC
T ss_pred -EEeCCCeEEEEEc
Confidence 8999999999997
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.8e-24 Score=226.88 Aligned_cols=277 Identities=16% Similarity=0.174 Sum_probs=204.5
Q ss_pred eeeeEEeeCCCc-eEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC------cCCCCCCeEEEEEcCCCCEEEEEEC
Q 036953 43 YVPKRQWVDASK-LKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP------LVPPPRSTIAAAFSPDGRTLASTHG 115 (792)
Q Consensus 43 ~V~s~aWspd~~-lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~------L~gH~~~V~sLafSPDG~~LaSGS~ 115 (792)
.+.+++|+|+++ +++++.. .+..+++++.|+.|++|+..+.. ...|...|.+++|+|++++|++++.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~------~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTV------SGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCB------SSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES
T ss_pred hcceEeeCCCCCCEEEEEec------CcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc
Confidence 577889999986 6776632 22334445778899999987542 2468899999999999999999999
Q ss_pred CCeEEEEECCC----CcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc------EEEEe----ccCCC
Q 036953 116 DHTVKIIDCQT----GNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSE------CIGSC----DFYRP 181 (792)
Q Consensus 116 DGtVrIWDl~t----gk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~------~v~t~----~h~s~ 181 (792)
|+.|++||+.+ .+.+..+.+|...|++++|+|+++++|++++.|++|++||+++++ ....+ .|...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 99999999987 458888999999999999999338999999999999999999876 33332 47889
Q ss_pred eeEEEEcCC-CcEEEEEcC-CeEEEEECCCCCcccCCeEEecC------CCCeEEEEEccCCCeEEEEEe-eC---cccc
Q 036953 182 IASIAFHAE-GELLAVASG-HKLYIWPYNNKEEASSPIIVLKT------RRSLRAVHFHPHAAPFVLTAE-VN---DLDS 249 (792)
Q Consensus 182 V~sVafSpd-G~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h------~~sVtsVafSPdG~~LlaS~s-~~---dLrs 249 (792)
|.+++|+|+ +.+|++++. +.|++||+++.+... ....+ ...|++++|+|++..+++++. +. .+..
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI---HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE---EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce---EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 999999999 788999884 559999998876432 22223 788999999999865555544 43 5554
Q ss_pred CCCc------eeee-cCCC---cccCCC-CceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCC-cEEEEc
Q 036953 250 SDSS------MTRA-TSPG---YLRYPP-PAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDS-RIDLQH 312 (792)
Q Consensus 250 ~d~~------~~l~-t~sg---~~~~p~-~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDG-r~lv~~ 312 (792)
++.. ..+. .... ...|.+ ....++....+..+.++. ....+.+|...|++++|+|+| ++++
T Consensus 245 ~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~-- 322 (416)
T 2pm9_A 245 WDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA-- 322 (416)
T ss_dssp EETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE--
T ss_pred EeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE--
Confidence 4322 1111 1111 233433 344444444444555544 123455788999999999999 7888
Q ss_pred cccccCCCCccccccccccccCCCCCccccccccccccCCCC
Q 036953 313 ASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 313 ~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
+++.|++|.-|++..+.+
T Consensus 323 ------------------------s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 323 ------------------------CASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ------------------------ECCSSSEEEEEESCCCCC
T ss_pred ------------------------EEecCCcEEEEEccCCCC
Confidence 788999999999877643
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=1.1e-21 Score=220.74 Aligned_cols=263 Identities=11% Similarity=0.057 Sum_probs=196.7
Q ss_pred CCceEeeecccc-------eeeCCCCce-eeeEEeeC--CCceEeecCCCceeecC------------------------
Q 036953 23 RRARNVSRLLAH-------REISPKTKY-VPKRQWVD--ASKLKTCGPSDSSVRDA------------------------ 68 (792)
Q Consensus 23 s~~r~V~~l~~~-------rels~~tk~-V~s~aWsp--d~~lla~G~~a~sv~d~------------------------ 68 (792)
.+...+|+.... +.+..+... +.+++|+| ++++++++..+..+..+
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 456889987644 334456677 99999999 99887776544332111
Q ss_pred ----------CcEEEEEeCC----CeEEEEeccCC--CcCCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcEEE
Q 036953 69 ----------KRGLVSWVEA----ESLRHLSAKYC--PLVPPPRSTIAAAFSPDGR-TLASTHGDHTVKIIDCQTGNCLK 131 (792)
Q Consensus 69 ----------~~~L~S~s~d----~sIrvWd~~t~--~L~gH~~~V~sLafSPDG~-~LaSGS~DGtVrIWDl~tgk~v~ 131 (792)
+..++++..+ +.+++|+.... .+.+|...|.+++|+|+++ .|++++.|+.|++||+.+++.+.
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~ 197 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 197 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee
Confidence 1123333333 46667763322 4678999999999999988 89999999999999999999999
Q ss_pred EecCCCC---CcEEEEEccCC-CCEEEEEeCCCeEEEEECCCCcEEEEe-----ccCCCeeEEEEcCCCcEEEEEc-CCe
Q 036953 132 VLSGHRR---TPWVVRFHPLR-SEILASGSLDHEVRLWDANTSECIGSC-----DFYRPIASIAFHAEGELLAVAS-GHK 201 (792)
Q Consensus 132 ~L~gH~~---~VtsVafSP~d-g~lLaSgS~DgtVrLWDl~tg~~v~t~-----~h~s~V~sVafSpdG~~LasgS-dd~ 201 (792)
.+.+|.. .|++++|+| + +++|++++.|+.|++||+++++.+..+ .|...|.+++|+ ++++|++++ ++.
T Consensus 198 ~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~ 275 (615)
T 1pgu_A 198 SDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADAT 275 (615)
T ss_dssp EECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSE
T ss_pred eecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCc
Confidence 9999999 999999999 7 999999999999999999999999998 788999999999 999999998 556
Q ss_pred EEEEECCCCCcccCCeEEecC----CCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecC
Q 036953 202 LYIWPYNNKEEASSPIIVLKT----RRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQS 277 (792)
Q Consensus 202 V~IWDlrt~~~~~~~~~~~~h----~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ss 277 (792)
|++||+++.+... ....+ ...+.++.|. +++.+++++.+..+ .+|....
T Consensus 276 i~~wd~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i-----------------------~~~d~~~ 328 (615)
T 1pgu_A 276 IRVWDVTTSKCVQ---KWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTL-----------------------NFYELGH 328 (615)
T ss_dssp EEEEETTTTEEEE---EEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCE-----------------------EEEETTE
T ss_pred EEEEECCCCcEEE---EEcCCCCcccCceeEEEeC-CCCeEEEEECCCCE-----------------------EEEECCC
Confidence 9999999876533 22222 3678888886 78877776654433 3333333
Q ss_pred CCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCcccccccccccc
Q 036953 278 GDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETF 350 (792)
Q Consensus 278 G~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~ 350 (792)
+.... .+.+|...|.++.+ |+ ++ +++.|++|.-|+..
T Consensus 329 ~~~~~------~~~~~~~~v~~~~~-~~---l~--------------------------~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 329 DEVLK------TISGHNKGITALTV-NP---LI--------------------------SGSYDGRIMEWSSS 365 (615)
T ss_dssp EEEEE------EECCCSSCEEEEET-TT---TE--------------------------EEETTSCEEETTTT
T ss_pred CcEEE------EEeCCCCCEEEEEe-cC---cE--------------------------EECCCCeEEEEEch
Confidence 22221 23458888889999 87 55 46777777777765
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=2.1e-22 Score=218.16 Aligned_cols=245 Identities=16% Similarity=0.154 Sum_probs=192.1
Q ss_pred CCCCceEeeeccccee-------eCCCCceeeeEEeeC-CCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---
Q 036953 21 LRRRARNVSRLLAHRE-------ISPKTKYVPKRQWVD-ASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC--- 89 (792)
Q Consensus 21 ~~s~~r~V~~l~~~re-------ls~~tk~V~s~aWsp-d~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~--- 89 (792)
...+.+.||+...... +..+...+..++|+| ++. .+++++.|+.|++|+...+
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~----------------~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN----------------VIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT----------------EEEEEETTSEEEEEECCTTCCS
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC----------------EEEEEeCCCeEEEEEccCCCCc
Confidence 4567889998754322 234566788899988 554 4455678899999998754
Q ss_pred --------CcCCCCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEe--cCCCCCcEEEEEccCCCCEEEEEeC
Q 036953 90 --------PLVPPPRSTIAAAFSPDG-RTLASTHGDHTVKIIDCQTGNCLKVL--SGHRRTPWVVRFHPLRSEILASGSL 158 (792)
Q Consensus 90 --------~L~gH~~~V~sLafSPDG-~~LaSGS~DGtVrIWDl~tgk~v~~L--~gH~~~VtsVafSP~dg~lLaSgS~ 158 (792)
.+.+|...|.+++|+|++ ++|++++.|+.|+|||+.+++.+..+ .+|...|.+++|+| ++++|++++.
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 196 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCR 196 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEET
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEec
Confidence 246899999999999998 69999999999999999999999999 88999999999999 9999999999
Q ss_pred CCeEEEEECCCCcEEEEe--ccCCC-eeEEEEcCCCcEEEEE---c-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEE
Q 036953 159 DHEVRLWDANTSECIGSC--DFYRP-IASIAFHAEGELLAVA---S-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHF 231 (792)
Q Consensus 159 DgtVrLWDl~tg~~v~t~--~h~s~-V~sVafSpdG~~Lasg---S-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVaf 231 (792)
|++|++||+++++.+..+ .|... +.++.|+|++++|+++ + ++.|++||+++.+... ......+...+.+++|
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-SLQELDTSSGVLLPFF 275 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-EEEECCCCSSCEEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-eEEeccCCCceeEEEE
Confidence 999999999999998887 35554 8999999999999998 4 4559999998876532 2233457788999999
Q ss_pred ccCCCeEEEEEe-eCccccCCCceeeecCCCcccCCCCceEEEEecCCCE-EEEeeccCcccCCCceEEEeEECCCCcEE
Q 036953 232 HPHAAPFVLTAE-VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDH-VSLAAELPLMSSLPFLIVPSVSIDDSRID 309 (792)
Q Consensus 232 SPdG~~LlaS~s-~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~-~~l~s~l~~l~gh~~~VwdV~~SpDGr~l 309 (792)
+|+++.++++++ +. .+.+|...++.. ...... +. |...|.+++|+|+|+++
T Consensus 276 s~~~~~l~~~g~~dg-----------------------~i~i~d~~~~~~~~~~l~~---~~-~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDS-----------------------SIRYFEITSEAPFLHYLSM---FS-SKESQRGMGYMPKRGLE 328 (402)
T ss_dssp ETTTTEEEEEETTCS-----------------------CEEEEEECSSTTCEEEEEE---EC-CSSCCSEEEECCGGGSC
T ss_pred cCCCCEEEEEEcCCC-----------------------eEEEEEecCCCcceEeecc---cc-cCCcccceEEecccccc
Confidence 999998877774 33 244444444441 222211 22 56788999999999987
Q ss_pred E
Q 036953 310 L 310 (792)
Q Consensus 310 v 310 (792)
+
T Consensus 329 ~ 329 (402)
T 2aq5_A 329 V 329 (402)
T ss_dssp G
T ss_pred e
Confidence 6
No 53
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.91 E-value=4.7e-22 Score=210.37 Aligned_cols=201 Identities=18% Similarity=0.252 Sum_probs=165.7
Q ss_pred CCCCceEeeecccc--------eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---
Q 036953 21 LRRRARNVSRLLAH--------REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC--- 89 (792)
Q Consensus 21 ~~s~~r~V~~l~~~--------rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~--- 89 (792)
...+.+++|+.... +.+..+...+..+.|+++++ .+++++.|++|++||..++
T Consensus 37 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~----------------~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 37 SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA----------------YALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS----------------EEEEEETTSEEEEEETTTTEEE
T ss_pred cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC----------------EEEEEeCCCEEEEEECCCCCee
Confidence 35567889976432 23445666777777777765 4566688999999999876
Q ss_pred -CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccC-----CCCEEEEEeCCCeEE
Q 036953 90 -PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPL-----RSEILASGSLDHEVR 163 (792)
Q Consensus 90 -~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~-----dg~lLaSgS~DgtVr 163 (792)
.+.+|...|.+++|+|++++|++|+.|++|++||+. ++++..+.+|...|.+++|+|. ++.++++++.|++|+
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 179 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEE
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEE
Confidence 467899999999999999999999999999999986 5678889999999999999982 234899999999999
Q ss_pred EEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 164 LWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 164 LWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
+||+++.+....+ .|...|.+++|+|++++|++++ |+.|++||+++.+.. ....+...|.+++|+|++..++++
T Consensus 180 ~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~v~~~~~sp~~~~la~~ 255 (319)
T 3frx_A 180 AWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM----YTLSAQDEVFSLAFSPNRYWLAAA 255 (319)
T ss_dssp EEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE----EEEECCSCEEEEEECSSSSEEEEE
T ss_pred EEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE----EEecCCCcEEEEEEcCCCCEEEEE
Confidence 9999999888777 5899999999999999999998 556999999887643 234456789999999999866654
Q ss_pred E
Q 036953 242 A 242 (792)
Q Consensus 242 ~ 242 (792)
.
T Consensus 256 ~ 256 (319)
T 3frx_A 256 T 256 (319)
T ss_dssp E
T ss_pred c
Confidence 4
No 54
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=6.6e-22 Score=210.00 Aligned_cols=275 Identities=13% Similarity=0.118 Sum_probs=200.0
Q ss_pred eCCCCceeeeEEeeC-CCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc-----------------CCCCCCe
Q 036953 37 ISPKTKYVPKRQWVD-ASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL-----------------VPPPRST 98 (792)
Q Consensus 37 ls~~tk~V~s~aWsp-d~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L-----------------~gH~~~V 98 (792)
+..+...+.+++|+| ++.++ +++..|+.|++|+...... .+|...|
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l----------------~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYM----------------LSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEE----------------EEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred eeccCCcEEEEEEecCCCCEE----------------EEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 345777899999999 76644 4456788888888875421 3599999
Q ss_pred EEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccC--CCCEEEEEeCCCeEEEEECCCCcEEEE
Q 036953 99 IAAAFSP-DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPL--RSEILASGSLDHEVRLWDANTSECIGS 175 (792)
Q Consensus 99 ~sLafSP-DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~--dg~lLaSgS~DgtVrLWDl~tg~~v~t 175 (792)
.+++|+| ++++|++++.|+.|++||+.+++.+..+. +...+.++.|++. ++.++++++.|+.|++||+++++.+..
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 9999999 88899999999999999999999888887 7888999999983 334999999999999999999988888
Q ss_pred ec-cCCCeeEEEEcCCCc-EEEEEc-CCeEEEEECCCCCccc-------------CCeEEecCCCCeEEEEEccCCCeEE
Q 036953 176 CD-FYRPIASIAFHAEGE-LLAVAS-GHKLYIWPYNNKEEAS-------------SPIIVLKTRRSLRAVHFHPHAAPFV 239 (792)
Q Consensus 176 ~~-h~s~V~sVafSpdG~-~LasgS-dd~V~IWDlrt~~~~~-------------~~~~~~~h~~sVtsVafSPdG~~Ll 239 (792)
+. |...|.+++|+|+++ +|++++ ++.|++||++...... .......|...|++++|+|++++++
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE
Confidence 75 889999999999998 577887 4559999998765211 0001135788999999999999888
Q ss_pred EEEeeCccccCCCc-----eeeecCC--------Cccc-CCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEe
Q 036953 240 LTAEVNDLDSSDSS-----MTRATSP--------GYLR-YPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPS 300 (792)
Q Consensus 240 aS~s~~dLrs~d~~-----~~l~t~s--------g~~~-~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV 300 (792)
+++.+..+..|+.. ....... .... .......++. ..+..+.++. ....+.+|...|.++
T Consensus 262 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~ 340 (408)
T 4a11_B 262 TVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV-PYGSTIAVYTVYSGEQITMLKGHYKTVDCC 340 (408)
T ss_dssp EEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE-EETTEEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE-ecCCEEEEEECcCCcceeeeccCCCeEEEE
Confidence 87775555444322 1111000 0000 1111122222 2233333333 123456799999999
Q ss_pred EECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCCCC
Q 036953 301 VSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIPP 355 (792)
Q Consensus 301 ~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p~ 355 (792)
+|+|+|++|+ +++.|++|.-|+...+++.
T Consensus 341 ~~s~~~~~l~--------------------------s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 341 VFQSNFQELY--------------------------SGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEETTTTEEE--------------------------EEETTSCEEEEEECC----
T ss_pred EEcCCCCEEE--------------------------EECCCCeEEEEeCCCCCcc
Confidence 9999999999 8999999999998888654
No 55
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.91 E-value=2.9e-22 Score=208.85 Aligned_cols=158 Identities=23% Similarity=0.362 Sum_probs=140.1
Q ss_pred CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC
Q 036953 90 PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANT 169 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~t 169 (792)
.+.+|.+.|++++|+|++++|++++.|+.|+|||+.+++....+.+|...|.+++|+| ++++|++++.|++|++||+++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCC
Confidence 3568999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCcc
Q 036953 170 SECIGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDL 247 (792)
Q Consensus 170 g~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dL 247 (792)
++++..+ .|...|.+++|+|++++|++++ ++.|++||+++.+... ....|...|.+++|+|+++.+++++.+..+
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK---TLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE---EecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 9998887 4888999999999999999998 4559999998876432 455688899999999999988777765544
Q ss_pred ccCC
Q 036953 248 DSSD 251 (792)
Q Consensus 248 rs~d 251 (792)
+.++
T Consensus 174 ~~wd 177 (312)
T 4ery_A 174 RIWD 177 (312)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.6e-22 Score=215.33 Aligned_cols=264 Identities=12% Similarity=0.134 Sum_probs=192.7
Q ss_pred ceeeeEEeeCCCc-eEeecCCCceeecCCcEEEEEeCCCeEEEEec----cCCC--------------c------CCCCC
Q 036953 42 KYVPKRQWVDASK-LKTCGPSDSSVRDAKRGLVSWVEAESLRHLSA----KYCP--------------L------VPPPR 96 (792)
Q Consensus 42 k~V~s~aWspd~~-lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~----~t~~--------------L------~gH~~ 96 (792)
..+.+++|+|++. +++++ ..++.+++|+. ..+. + .+|..
T Consensus 46 ~~v~~~~~s~~~~~~l~~~----------------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYG----------------EKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTN 109 (425)
T ss_dssp SCCSEEEECSSCTTEEEEE----------------ETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CB
T ss_pred CceEEEEECCCCCcEEEEe----------------cCCceEEEEEEecccCCccccccccccccccccccccccccCCCC
Confidence 5678889998877 66555 33444444444 2221 1 23678
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC 176 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~ 176 (792)
.|.+++|+|++++|++++.|+.|++|| .+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHF 187 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEe
Confidence 999999999999999999999999999 67888999999999999999999 9999999999999999999999988887
Q ss_pred c-cCCC---------------eeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEE
Q 036953 177 D-FYRP---------------IASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVL 240 (792)
Q Consensus 177 ~-h~s~---------------V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~Lla 240 (792)
. +... +.+++|++++.+++.+.++.|++||+++.+.. .....|...|++++|+|+++.+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT---GKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS---EEECCCSSCEEEEEEETTTTEEEE
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee---eeeccCCCceEEEEECCCCCEEEE
Confidence 5 3333 89999999877555555677999999987643 345578899999999999998887
Q ss_pred EEeeCccccCCC-----ceeeecCCC---cccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCc
Q 036953 241 TAEVNDLDSSDS-----SMTRATSPG---YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSR 307 (792)
Q Consensus 241 S~s~~dLrs~d~-----~~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr 307 (792)
++.+..+..++. ...+..... ...+.+.. .++....+..+.++. ....+..|...|.++.|+|+|+
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQ 343 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSS
T ss_pred EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCC
Confidence 776555554442 233322222 22333333 444444444555544 1234456889999999999999
Q ss_pred EEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 308 IDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 308 ~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
+|+ +++.|.+|.-|+...+.
T Consensus 344 ~l~--------------------------~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 344 KYA--------------------------VAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEE--------------------------EEETTSCEEEEECHHHH
T ss_pred EEE--------------------------EEECCCeEEEEECCCCc
Confidence 999 67788888888876553
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.7e-22 Score=215.29 Aligned_cols=261 Identities=12% Similarity=0.047 Sum_probs=196.2
Q ss_pred CceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---CcCCCCCCeEEEEEcCCCCEEEEEECCC
Q 036953 41 TKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---PLVPPPRSTIAAAFSPDGRTLASTHGDH 117 (792)
Q Consensus 41 tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---~L~gH~~~V~sLafSPDG~~LaSGS~DG 117 (792)
...+.+++|++++++++ ++..++.|++|+.... .+.+|...|.+++|+|++++|++++.|+
T Consensus 108 ~~~v~~~~~s~~~~~l~----------------~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIV----------------TGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN 171 (425)
T ss_dssp CBCEEEEEECTTSSEEE----------------EEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred CCceEEEEEcCCCCEEE----------------EEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCC
Confidence 44788888888876544 4456777888874322 4568999999999999999999999999
Q ss_pred eEEEEECCCCcEEEEecCCCCC---------------cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCC
Q 036953 118 TVKIIDCQTGNCLKVLSGHRRT---------------PWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRP 181 (792)
Q Consensus 118 tVrIWDl~tgk~v~~L~gH~~~---------------VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~ 181 (792)
.|++||+.+++.+..+..+... +.+++|++ + ..+++++.|+.|++||+++++.+..+ .+...
T Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 249 (425)
T 1r5m_A 172 VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGP 249 (425)
T ss_dssp CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCCSSC
T ss_pred eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCc
Confidence 9999999999999999888777 99999998 5 56899999999999999998887777 58899
Q ss_pred eeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCC-----cee
Q 036953 182 IASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDS-----SMT 255 (792)
Q Consensus 182 V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~-----~~~ 255 (792)
|.+++|+|++++|++++ ++.|++||+++.+.. .....|...|.+++|+|++ .+++++.+..+..++. ...
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 99999999999999998 455999999887643 3455688999999999999 6666666554444432 222
Q ss_pred eecCCC---cccCCCCceEEEEecCCCEEEEee----c---------------------cCcccCCCc--eEEEeEECCC
Q 036953 256 RATSPG---YLRYPPPAVFVANAQSGDHVSLAA----E---------------------LPLMSSLPF--LIVPSVSIDD 305 (792)
Q Consensus 256 l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s----~---------------------l~~l~gh~~--~VwdV~~SpD 305 (792)
+..... ...+.+....++.+..+..+.++. . ...+.+|.. .|.++.|+|+
T Consensus 326 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 326 SIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp EECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT
T ss_pred cccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC
Confidence 332222 233444444455555444444443 1 234566766 9999999999
Q ss_pred CcEEEEccccccCCCCccccccccccccCCCCCccccccccccc
Q 036953 306 SRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 306 Gr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
|++|+ +++.|++|.-|+.
T Consensus 406 ~~~l~--------------------------~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 406 GNKIS--------------------------VAYSLQEGSVVAI 423 (425)
T ss_dssp SSEEE--------------------------EEESSSCCEEEEC
T ss_pred CceEE--------------------------EEecCceEEEEee
Confidence 99998 6777788877764
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=9.9e-23 Score=212.83 Aligned_cols=281 Identities=12% Similarity=0.062 Sum_probs=198.3
Q ss_pred CCceEeeecccceeeC----CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC-----cCC
Q 036953 23 RRARNVSRLLAHREIS----PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP-----LVP 93 (792)
Q Consensus 23 s~~r~V~~l~~~rels----~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~-----L~g 93 (792)
.+...+|+....+... .+...+.++.|+++.. .+..++++..++.|++|+..... +.+
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSL-------------QQRYLATGDFGGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCT-------------TTCCEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCC-------------CCceEEEecCCCeEEEEeCCCCCccEEEEEe
Confidence 6778899877654322 2344667777777620 13456677889999999987553 568
Q ss_pred CCCCeEEEEE------cCCCCEEEEEECCCeEEEEECCCCc-EEEEecCCCC----CcEEEE----EccCCCCEEEEEeC
Q 036953 94 PPRSTIAAAF------SPDGRTLASTHGDHTVKIIDCQTGN-CLKVLSGHRR----TPWVVR----FHPLRSEILASGSL 158 (792)
Q Consensus 94 H~~~V~sLaf------SPDG~~LaSGS~DGtVrIWDl~tgk-~v~~L~gH~~----~VtsVa----fSP~dg~lLaSgS~ 158 (792)
|...|.+++| +|++++|++++.|+.|++||+.+++ .+..+..|.+ .|.+++ |+| +++++++++.
T Consensus 110 ~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~ 188 (357)
T 3i2n_A 110 HKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYD 188 (357)
T ss_dssp CSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEET
T ss_pred cccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEcc
Confidence 9999999954 6899999999999999999999887 6778876655 899998 677 8999999999
Q ss_pred CCeEEEEECCCCcEEEEeccCCCeeEEEEcC---CCcEEEEEc-CCeEEEEECCCCCcccCCe--EEecCCCCeEEEEEc
Q 036953 159 DHEVRLWDANTSECIGSCDFYRPIASIAFHA---EGELLAVAS-GHKLYIWPYNNKEEASSPI--IVLKTRRSLRAVHFH 232 (792)
Q Consensus 159 DgtVrLWDl~tg~~v~t~~h~s~V~sVafSp---dG~~LasgS-dd~V~IWDlrt~~~~~~~~--~~~~h~~sVtsVafS 232 (792)
|+.|++||+++++......+...+.+++|+| ++++|++++ ++.|++||+++.+...... ....|...|++++|+
T Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 268 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL 268 (357)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE
T ss_pred CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC
Confidence 9999999999999888888999999999999 899999988 5669999998776543111 223688999999999
Q ss_pred cCCCe-EEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEE
Q 036953 233 PHAAP-FVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 233 PdG~~-LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~ 311 (792)
|+++. +++++.+..++.|+...... ........... ...+....+ ..+.+|...|++++|+|+|++++
T Consensus 269 ~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~g~~~--~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~- 337 (357)
T 3i2n_A 269 PQNRELFLTAGGAGGLHLWKYEYPIQ----RSKKDSEGIEM--GVAGSVSLL----QNVTLSTQPISSLDWSPDKRGLC- 337 (357)
T ss_dssp TTEEEEEEEEETTSEEEEEEEECCSC----C--CCTTSCCC--CCCCEEEEE----EEEECCSSCEEEEEECSSSTTEE-
T ss_pred CCCCcEEEEEeCCCcEEEeecCCCcc----cccccCCCCcc--cccccccee----eccccCCCCeeEEEEcCCCCeEE-
Confidence 99994 55554444444333221000 00000000000 001111111 12455899999999999999876
Q ss_pred ccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 312 HASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 312 ~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
.+++.|++|.-|++...
T Consensus 338 ------------------------~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 338 ------------------------VCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ------------------------EEEETTSEEEEEEECC-
T ss_pred ------------------------EEecCCCcEEEEECCCc
Confidence 14778888888886543
No 59
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=1e-22 Score=217.20 Aligned_cols=269 Identities=9% Similarity=0.045 Sum_probs=200.6
Q ss_pred eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----------cCCCCCCeEEEEEc
Q 036953 35 REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----------LVPPPRSTIAAAFS 104 (792)
Q Consensus 35 rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----------L~gH~~~V~sLafS 104 (792)
+.+..+...+.+++|++ + .+++++.|+.|++|+..... +.+|...|.+++|+
T Consensus 10 ~~~~~h~~~i~~~~~~~--~----------------~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 71 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--S----------------FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 71 (397)
T ss_dssp EESSCSSSCEEEEEECS--S----------------EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--C----------------eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEe
Confidence 44556777888998876 2 45666788999999987654 46899999999999
Q ss_pred CC----C---CEEEEEECCCeEEEEECCCCcE-----EEEecCC-----CCCcEEEEEc----cCCCCE-EEEEeCCCeE
Q 036953 105 PD----G---RTLASTHGDHTVKIIDCQTGNC-----LKVLSGH-----RRTPWVVRFH----PLRSEI-LASGSLDHEV 162 (792)
Q Consensus 105 PD----G---~~LaSGS~DGtVrIWDl~tgk~-----v~~L~gH-----~~~VtsVafS----P~dg~l-LaSgS~DgtV 162 (792)
|+ + ++|++++.|+.|++||+.+++. +..+..| ...|.+++|+ | ++++ |++++.|+.|
T Consensus 72 ~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i 150 (397)
T 1sq9_A 72 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTT 150 (397)
T ss_dssp EEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCE
T ss_pred cccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcE
Confidence 99 9 9999999999999999998887 8888888 5999999999 9 8888 9999999999
Q ss_pred EEEECCC------CcEEE-----Ee--------ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEec-
Q 036953 163 RLWDANT------SECIG-----SC--------DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLK- 221 (792)
Q Consensus 163 rLWDl~t------g~~v~-----t~--------~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~- 221 (792)
++||+++ ++.+. .+ .+...+.+++|+|++ +|++++ ++.|++||+++.+... ....
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~ 226 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY---NFESQ 226 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE---EEECC
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeE---EEecc
Confidence 9999988 55544 44 267889999999999 999988 4559999998876432 3444
Q ss_pred --C---CCCeEEEEEccCCCeEEEEEee---CccccCCC-----ceeeec-------------CCC---cccCCCCceEE
Q 036953 222 --T---RRSLRAVHFHPHAAPFVLTAEV---NDLDSSDS-----SMTRAT-------------SPG---YLRYPPPAVFV 272 (792)
Q Consensus 222 --h---~~sVtsVafSPdG~~LlaS~s~---~dLrs~d~-----~~~l~t-------------~sg---~~~~p~~~~~l 272 (792)
| ...|++++|+|+++.|++++.+ ..+..++. ...+.. ..+ ...|.+....+
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 6 8899999999999988887766 55554442 223332 122 23344444444
Q ss_pred EEecCCCEEEEee-----ccCccc------CC---------------CceEEEeEECCCC----------cEEEEccccc
Q 036953 273 ANAQSGDHVSLAA-----ELPLMS------SL---------------PFLIVPSVSIDDS----------RIDLQHASRR 316 (792)
Q Consensus 273 ~~~ssG~~~~l~s-----~l~~l~------gh---------------~~~VwdV~~SpDG----------r~lv~~~~~~ 316 (792)
+.+..+..+.++. ....+. +| ...|.+++|+|+| ++|+
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~------ 380 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLC------ 380 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEE------
T ss_pred EEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEE------
Confidence 4444444444443 112233 45 8999999999999 6777
Q ss_pred cCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 317 ASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 317 ~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-|+.-.|
T Consensus 381 --------------------s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 381 --------------------CVCLDRSIRWFREAGG 396 (397)
T ss_dssp --------------------EEETTTEEEEEEEEC-
T ss_pred --------------------EecCCCcEEEEEcCCC
Confidence 7888999999987654
No 60
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.91 E-value=3e-22 Score=209.37 Aligned_cols=210 Identities=20% Similarity=0.226 Sum_probs=164.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC--CcEEEEecCCCCCcEEEEEcc-CCCCEEEEEeCCCeEEEEEC
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQT--GNCLKVLSGHRRTPWVVRFHP-LRSEILASGSLDHEVRLWDA 167 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~t--gk~v~~L~gH~~~VtsVafSP-~dg~lLaSgS~DgtVrLWDl 167 (792)
+.+|.+.|.+++|+|+|++|++|+.|++|+|||+.. .+.+..+.+|.+.|++++|++ .++++|++|+.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 568999999999999999999999999999999974 367889999999999999986 24789999999999999999
Q ss_pred CCCc--EEEEe-ccCCCeeEEEEcCC--CcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCC------
Q 036953 168 NTSE--CIGSC-DFYRPIASIAFHAE--GELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHA------ 235 (792)
Q Consensus 168 ~tg~--~v~t~-~h~s~V~sVafSpd--G~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG------ 235 (792)
++++ .+..+ .|...|.+++|+|+ +++|++++ ++.|++||++...... ......|...|++++|+|++
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCccccccc
Confidence 9874 34444 48889999999998 88999988 5569999998764322 34566789999999999974
Q ss_pred -------CeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCC--
Q 036953 236 -------APFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDS-- 306 (792)
Q Consensus 236 -------~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDG-- 306 (792)
+.|++++.+.. +.+|+...+..... ....+.+|...|.+++|+|+|
T Consensus 164 ~~~~~~~~~l~sgs~D~~-----------------------v~lwd~~~~~~~~~--~~~~l~~H~~~V~~v~~sp~~~~ 218 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNL-----------------------VKIWKYNSDAQTYV--LESTLEGHSDWVRDVAWSPTVLL 218 (297)
T ss_dssp ------CCEEEEEETTSC-----------------------EEEEEEETTTTEEE--EEEEECCCSSCEEEEEECCCCSS
T ss_pred CCCCCCcceEEEEcCCCc-----------------------EEEEEEcCCCceEE--EEEEecCCCCceEEEEECCCCCC
Confidence 44444443332 34444443331100 011355699999999999995
Q ss_pred -cEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 307 -RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 307 -r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
++|+ +++.|++|.-|+...+
T Consensus 219 ~~~la--------------------------s~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 219 RSYMA--------------------------SVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SEEEE--------------------------EEETTSCEEEEEESST
T ss_pred ceEEE--------------------------EEECCCcEEEEEeCCC
Confidence 7888 8999999999997553
No 61
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.91 E-value=5.6e-23 Score=221.78 Aligned_cols=228 Identities=13% Similarity=0.137 Sum_probs=171.4
Q ss_pred cCCcEEEEEeC------CCeEEEEeccCCC--------cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE--
Q 036953 67 DAKRGLVSWVE------AESLRHLSAKYCP--------LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL-- 130 (792)
Q Consensus 67 d~~~~L~S~s~------d~sIrvWd~~t~~--------L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v-- 130 (792)
..+..|++++. |+.+++|+...+. ..+|...|.+++|+|+++ +++++.||+|+|||+.+++..
T Consensus 52 pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~ 130 (357)
T 4g56_B 52 RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLV 130 (357)
T ss_dssp SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CC
T ss_pred CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEE
Confidence 34567888876 6778999875441 246889999999999875 567889999999999887654
Q ss_pred --EEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCc-EEEEEc-CCeEEEE
Q 036953 131 --KVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGE-LLAVAS-GHKLYIW 205 (792)
Q Consensus 131 --~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~-~LasgS-dd~V~IW 205 (792)
....+|...|++++|+| ++++|++++.|++|++||+++++++..+. |...|.+++|++++. +|++++ ++.|++|
T Consensus 131 ~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 131 NKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLW 209 (357)
T ss_dssp CCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEEC
T ss_pred EeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEE
Confidence 23458999999999999 99999999999999999999999998885 889999999999885 677777 5569999
Q ss_pred ECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe-eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEe
Q 036953 206 PYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE-VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLA 284 (792)
Q Consensus 206 Dlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s-~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~ 284 (792)
|+++++... ......+...+++++|+|++..+++++. +.. +.+|+..++....
T Consensus 210 d~~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-----------------------i~~wd~~~~~~~~-- 263 (357)
T 4g56_B 210 DTRKPKPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGN-----------------------VSLVNIKNPDSAQ-- 263 (357)
T ss_dssp CTTSSSCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-----------------------EEEEESSCGGGCE--
T ss_pred ECCCCceee-eeeeccccccccchhhhhcccceEEEeecccc-----------------------eeEEECCCCcEeE--
Confidence 999887543 2223346778999999999776666654 332 3444444433322
Q ss_pred eccCcccCCCceEEEeEECCCC-cEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 285 AELPLMSSLPFLIVPSVSIDDS-RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 285 s~l~~l~gh~~~VwdV~~SpDG-r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
.+.+|...|.+++|+|+| ++|+ +++.|++|.-||.-.+
T Consensus 264 ----~~~~~~~~v~~l~~sp~~~~~la--------------------------sgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 264 ----TSAVHSQNITGLAYSYHSSPFLA--------------------------SISEDCTVAVLDADFS 302 (357)
T ss_dssp ----EECCCSSCEEEEEECSSSSCCEE--------------------------EEETTSCEEEECTTSC
T ss_pred ----EEeccceeEEEEEEcCCCCCEEE--------------------------EEeCCCEEEEEECCCC
Confidence 234588899999999998 5777 7899999999997655
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.8e-23 Score=239.95 Aligned_cols=251 Identities=11% Similarity=0.061 Sum_probs=181.6
Q ss_pred CceeeeEEeeCCC---------ceEeecCCCce---eecCCcEEEEEeCCCeEEEEeccCCC--------cCCCCCCeEE
Q 036953 41 TKYVPKRQWVDAS---------KLKTCGPSDSS---VRDAKRGLVSWVEAESLRHLSAKYCP--------LVPPPRSTIA 100 (792)
Q Consensus 41 tk~V~s~aWspd~---------~lla~G~~a~s---v~d~~~~L~S~s~d~sIrvWd~~t~~--------L~gH~~~V~s 100 (792)
...+.+++|+|++ .+++++..... .......+.+++.|++|++|+..+++ +..|.+.|.+
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~ 212 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD 212 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence 3467889999986 67777642211 00112346778899999999987654 3467788999
Q ss_pred EEEcCC------CCEEEEEECCCeEEEEECCCCcE-----------EEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEE
Q 036953 101 AAFSPD------GRTLASTHGDHTVKIIDCQTGNC-----------LKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVR 163 (792)
Q Consensus 101 LafSPD------G~~LaSGS~DGtVrIWDl~tgk~-----------v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVr 163 (792)
++|+|+ +.+|++++.||+|+|||+.+++. ...+.+|...|++++|++ + ..|++|+.|++|+
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEE
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEE
Confidence 999996 57999999999999999986642 246789999999999998 4 5899999999999
Q ss_pred EEECCCCc-EEEEe-ccCCCeeEE--EEcCCC-cEEEEEc-CCeEEEEECCCCCcccCCeEEecCC--CCeEEEEEccCC
Q 036953 164 LWDANTSE-CIGSC-DFYRPIASI--AFHAEG-ELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTR--RSLRAVHFHPHA 235 (792)
Q Consensus 164 LWDl~tg~-~v~t~-~h~s~V~sV--afSpdG-~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~--~sVtsVafSPdG 235 (792)
+||+++++ +...+ .|...|.++ .|++++ ++|++++ |+.|+|||+++.+... ....|. ..|.+++|+|++
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRGSNLVPVVYCPQI 367 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSCCSCCCEEEETTT
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---ccccccccCcccceEeCCCc
Confidence 99999763 43444 588999999 578888 8999998 5569999998876543 223332 358899999999
Q ss_pred CeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEcccc
Q 036953 236 APFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASR 315 (792)
Q Consensus 236 ~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~ 315 (792)
+.+++++.+.. +.+|+...+.+... +.+|...|++++|+|+|++|+
T Consensus 368 ~~l~s~~~d~t-----------------------v~lwd~~~~~~~~~------l~gH~~~V~sva~Sp~g~~l~----- 413 (524)
T 2j04_B 368 YSYIYSDGASS-----------------------LRAVPSRAAFAVHP------LVSRETTITAIGVSRLHPMVL----- 413 (524)
T ss_dssp TEEEEECSSSE-----------------------EEEEETTCTTCCEE------EEECSSCEEEEECCSSCCBCE-----
T ss_pred CeEEEeCCCCc-----------------------EEEEECccccccee------eecCCCceEEEEeCCCCCeEE-----
Confidence 97666554432 34444444443222 234999999999999999999
Q ss_pred ccCCCCccccccccccccCCCCCccccccccccccC
Q 036953 316 RASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFP 351 (792)
Q Consensus 316 ~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~ 351 (792)
+|+.|++|.-|+...
T Consensus 414 ---------------------Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 414 ---------------------AGSADGSLIITNAAR 428 (524)
T ss_dssp ---------------------EEETTTEEECCBSCS
T ss_pred ---------------------EEECCCEEEEEechH
Confidence 899999999999644
No 63
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=4.9e-22 Score=207.49 Aligned_cols=230 Identities=14% Similarity=0.176 Sum_probs=171.4
Q ss_pred eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC-C-----CcCCCCCCeEEEEEcCCCCEE
Q 036953 37 ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY-C-----PLVPPPRSTIAAAFSPDGRTL 110 (792)
Q Consensus 37 ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t-~-----~L~gH~~~V~sLafSPDG~~L 110 (792)
+..+...+.+++|+|+.. .+..++++..|+.|++|+..+ + .+.+|...|.+++|+|++++|
T Consensus 35 ~~~h~~~v~~~~~~~~~~-------------~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTL-------------PGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp SSCCSSCEEEEEECCTTS-------------SSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred ccCCCCceEEEEEcCCCC-------------CceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEE
Confidence 345667899999998830 122455567788888888875 2 356799999999999999999
Q ss_pred EEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEE--ccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC--------
Q 036953 111 ASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRF--HPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR-------- 180 (792)
Q Consensus 111 aSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVaf--SP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s-------- 180 (792)
++++.|+.|++||+.+++.+. +.+|...|++++| ++ ++++|++++.|++|++||+++++++..+....
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI 179 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec
Confidence 999999999999999988766 4569999999999 88 88899999999999999999887665554322
Q ss_pred ----------------------------------CeeEEEEcCCCcE----EEEEc-CCeEEEEECCCCCcccCCeEEec
Q 036953 181 ----------------------------------PIASIAFHAEGEL----LAVAS-GHKLYIWPYNNKEEASSPIIVLK 221 (792)
Q Consensus 181 ----------------------------------~V~sVafSpdG~~----LasgS-dd~V~IWDlrt~~~~~~~~~~~~ 221 (792)
.+..+.+.++... +++++ ++.|++||++.............
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 2334444443332 67776 55699999987753221233344
Q ss_pred CCC------------CeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCc
Q 036953 222 TRR------------SLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPL 289 (792)
Q Consensus 222 h~~------------sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~ 289 (792)
|.. .|++++|+|++++|++++.+.. +.+|+..++..+..
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-----------------------i~iwd~~~~~~~~~------ 310 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-----------------------FSFWDKDARTKLKT------ 310 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC-----------------------EEEEETTTTEEEEE------
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCe-----------------------EEEEECCCCcEEEE------
Confidence 433 7999999999998877775543 44555555444332
Q ss_pred ccCCCceEEEeEECCCCcEEE
Q 036953 290 MSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 290 l~gh~~~VwdV~~SpDGr~lv 310 (792)
+.+|...|.+++|+|||++|+
T Consensus 311 ~~~~~~~v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 311 SEQLDQPISACCFNHNGNIFA 331 (368)
T ss_dssp CCCCSSCEEEEEECTTSSCEE
T ss_pred ecCCCCCceEEEECCCCCeEE
Confidence 335889999999999999999
No 64
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.90 E-value=1.8e-22 Score=215.02 Aligned_cols=203 Identities=16% Similarity=0.099 Sum_probs=162.3
Q ss_pred CCcCCCCCCeEEEEE-----cC-CCCEEEEEECCCeEEEEECCCC-------cEEEEecCCCCCcEEEEEccCCCCEEEE
Q 036953 89 CPLVPPPRSTIAAAF-----SP-DGRTLASTHGDHTVKIIDCQTG-------NCLKVLSGHRRTPWVVRFHPLRSEILAS 155 (792)
Q Consensus 89 ~~L~gH~~~V~sLaf-----SP-DG~~LaSGS~DGtVrIWDl~tg-------k~v~~L~gH~~~VtsVafSP~dg~lLaS 155 (792)
..+.+|.+.|++++| ++ ++++|++|+.|++|+|||+.+. .....+.+|...|.+++|+| ++.++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s 93 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAIS 93 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEE
Confidence 457799999999999 77 9999999999999999998743 45678899999999999999 9999999
Q ss_pred EeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc
Q 036953 156 GSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP 233 (792)
Q Consensus 156 gS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP 233 (792)
++.|++|++||+++++++..+ .|...|.+++|+|++++|++++ ++.|++||+....... ......|...|.+++|+|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS-SAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE-CCTTTSCSSCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee-eecccCCCceeeeeeecc
Confidence 999999999999999988887 5899999999999999999998 5559999997432111 011125778899999999
Q ss_pred CC----------CeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEEC
Q 036953 234 HA----------APFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSI 303 (792)
Q Consensus 234 dG----------~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~S 303 (792)
++ .++++++.+..+ .+|+ ..+.... .+.+|...|.+++|+
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i-----------------------~iwd-~~~~~~~------~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRL-----------------------KVWN-TNFQIRY------TFKAHESNVNHLSIS 222 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEE-----------------------EEEE-TTTEEEE------EEECCSSCEEEEEEC
T ss_pred ccccccccCCCCCEEEEEcCCCEE-----------------------EEEc-CCCceeE------EEcCccccceEEEEC
Confidence 87 344444433333 3333 1111111 234588999999999
Q ss_pred CCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccc
Q 036953 304 DDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 304 pDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
|||++|+ +++.|++|.-||.
T Consensus 223 ~~g~~l~--------------------------sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 223 PNGKYIA--------------------------TGGKDKKLLIWDI 242 (343)
T ss_dssp TTSSEEE--------------------------EEETTCEEEEEES
T ss_pred CCCCEEE--------------------------EEcCCCeEEEEEC
Confidence 9999999 8999999999996
No 65
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=1.9e-21 Score=202.09 Aligned_cols=227 Identities=17% Similarity=0.203 Sum_probs=185.7
Q ss_pred CCCceEeeecccc--------eeeCCCCceeeeEEeeCCCceEeecCCCceee--------------------------c
Q 036953 22 RRRARNVSRLLAH--------REISPKTKYVPKRQWVDASKLKTCGPSDSSVR--------------------------D 67 (792)
Q Consensus 22 ~s~~r~V~~l~~~--------rels~~tk~V~s~aWspd~~lla~G~~a~sv~--------------------------d 67 (792)
..+.+++|+.... +.+..+...+..+.|++++++++++..+..+. .
T Consensus 59 ~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 138 (340)
T ss_dssp TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEee
Confidence 4567999987543 23445677899999999999887776554432 2
Q ss_pred CCcEEEEEeCCCeEEEEeccCC-----CcCCCCCCeEEEEEcCCC--CEEEEEECCCeEEEEECCCCcEEEEecCCCCCc
Q 036953 68 AKRGLVSWVEAESLRHLSAKYC-----PLVPPPRSTIAAAFSPDG--RTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTP 140 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~-----~L~gH~~~V~sLafSPDG--~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~V 140 (792)
.+..+++++.|+.+++|+.... .+.+|...+.+++|++++ ..+++++.|+.|++||+.+++.+..+.+|.+.|
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v 218 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYL 218 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcE
Confidence 2345788899999999998643 467899999999999854 578999999999999999999999999999999
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccC-----
Q 036953 141 WVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASS----- 215 (792)
Q Consensus 141 tsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~----- 215 (792)
++++|+| ++++|++++.|++|++||+++.+++..+.+...+.++.|+|++.+++.+.++.|++||++.......
T Consensus 219 ~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 297 (340)
T 4aow_A 219 NTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 297 (340)
T ss_dssp EEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-
T ss_pred EEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccc
Confidence 9999999 9999999999999999999999999999988999999999999988888888899999987653220
Q ss_pred -CeEEecCCCCeEEEEEccCCCeEEEEEeeCcccc
Q 036953 216 -PIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDS 249 (792)
Q Consensus 216 -~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs 249 (792)
......|...|++++|+|++++|++++.+..|+.
T Consensus 298 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 298 ISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp ------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 1122357889999999999998887776554443
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=2.9e-22 Score=234.81 Aligned_cols=245 Identities=13% Similarity=0.162 Sum_probs=198.6
Q ss_pred ceeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCE
Q 036953 34 HREISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRT 109 (792)
Q Consensus 34 ~rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~ 109 (792)
++.+..+...+.+++|+|++.+++++ ..++.|++|+..++ .+.+|...|.+++|+|++++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~----------------~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 69 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTT----------------LYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNW 69 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEE----------------ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEE----------------eCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCE
Confidence 44556677789999999998765544 56788899988765 45689999999999999999
Q ss_pred EEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC-cEEEEe-ccCCCeeEEEE
Q 036953 110 LASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS-ECIGSC-DFYRPIASIAF 187 (792)
Q Consensus 110 LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg-~~v~t~-~h~s~V~sVaf 187 (792)
|++++.||.|+|||+.+++.+..+.+|.+.|++++|+| ++++|++++.|++|++||+.++ .....+ .|...|.+++|
T Consensus 70 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 99999999999999999999999999999999999999 9999999999999999999987 555555 58899999999
Q ss_pred cC-CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc--CCCeEEEEEeeCccccCCCceeeecCCCcc
Q 036953 188 HA-EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP--HAAPFVLTAEVNDLDSSDSSMTRATSPGYL 263 (792)
Q Consensus 188 Sp-dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP--dG~~LlaS~s~~dLrs~d~~~~l~t~sg~~ 263 (792)
+| ++++|++++ ++.|++||++..+... .....+...+..++|+| ++..+++++.+.
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg------------------ 208 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPDKPYMITASDDL------------------ 208 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCCCEEEECCSTTCCEEEEECTTS------------------
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCccee--EEecCCCCCEEEEEEEECCCCCEEEEEeCCC------------------
Confidence 99 888999988 5569999998776432 22233458899999999 888666655433
Q ss_pred cCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccc
Q 036953 264 RYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGT 343 (792)
Q Consensus 264 ~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~t 343 (792)
.+.+|+..++...... .+|...|..+.|+|+|++++ +++.|++
T Consensus 209 -----~i~~~d~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~--------------------------~~~~dg~ 251 (814)
T 3mkq_A 209 -----TIKIWDYQTKSCVATL------EGHMSNVSFAVFHPTLPIII--------------------------SGSEDGT 251 (814)
T ss_dssp -----EEEEEETTTTEEEEEE------ECCSSCEEEEEECSSSSEEE--------------------------EEETTSC
T ss_pred -----EEEEEECCCCcEEEEE------cCCCCCEEEEEEcCCCCEEE--------------------------EEeCCCe
Confidence 2444554444433322 34888999999999999999 7888999
Q ss_pred cccccccCC
Q 036953 344 VPSMETFPV 352 (792)
Q Consensus 344 v~p~~~~~~ 352 (792)
|.-|+...+
T Consensus 252 v~vwd~~~~ 260 (814)
T 3mkq_A 252 LKIWNSSTY 260 (814)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 999987655
No 67
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.90 E-value=1.8e-21 Score=211.79 Aligned_cols=180 Identities=22% Similarity=0.306 Sum_probs=148.4
Q ss_pred EEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEc
Q 036953 71 GLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFH 146 (792)
Q Consensus 71 ~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafS 146 (792)
.+++++.|+.|++|+..++ .+.+|...|.+++|+|++++|++++.|++|++||+.++++...+. +...+.+++|+
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEE
Confidence 4566678899999998765 367899999999999999999999999999999999999888876 66789999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCccc---
Q 036953 147 PLRSEILASGSLDHEVRLWDANTSECIGSC--------DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEAS--- 214 (792)
Q Consensus 147 P~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--------~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~--- 214 (792)
|.++++|++++.|++|++||+++++.+..+ .|...|.+++|+|++++|++++ |+.|++||++......
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 978899999999999999999999887765 4778999999999999999998 5569999997653211
Q ss_pred ------CCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 215 ------SPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 215 ------~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
.......|...|.+++|+|++.+|++++.+..+..|+
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 1123456889999999999999888777655555444
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=1.4e-21 Score=211.85 Aligned_cols=193 Identities=10% Similarity=0.151 Sum_probs=148.7
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---------------CcCCCC--------
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---------------PLVPPP-------- 95 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---------------~L~gH~-------- 95 (792)
.....+.+++|++++.++++| ..|+.|++|+.... .+.+|.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g----------------~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 89 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATG----------------DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKS 89 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEE----------------ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGT
T ss_pred cccCcEEEEEECCCCCEEEEE----------------cCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccc
Confidence 345689999999998766554 56677777776532 345787
Q ss_pred ----CCeEEEEEcCCC--CEEEEEECCCeEEEEECCCCcEE---------------------------------------
Q 036953 96 ----RSTIAAAFSPDG--RTLASTHGDHTVKIIDCQTGNCL--------------------------------------- 130 (792)
Q Consensus 96 ----~~V~sLafSPDG--~~LaSGS~DGtVrIWDl~tgk~v--------------------------------------- 130 (792)
..|.+++|+|++ ..|++++.|++|++||+.+++..
T Consensus 90 ~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
T 3dw8_B 90 LEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPR 169 (447)
T ss_dssp EEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEE
T ss_pred ccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccce
Confidence 889999999988 89999999999999998764432
Q ss_pred EE-ecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC-CcEEEEe--------ccCCCeeEEEEcCCC-cEEEEEcC
Q 036953 131 KV-LSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANT-SECIGSC--------DFYRPIASIAFHAEG-ELLAVASG 199 (792)
Q Consensus 131 ~~-L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~t-g~~v~t~--------~h~s~V~sVafSpdG-~~LasgSd 199 (792)
.. +.+|...|++++|+| ++++|+++ .|++|++||+++ ++.+..+ .|...|.+++|+|++ ++|++++.
T Consensus 170 ~~~~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 170 RIFANAHTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp EEECSCCSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET
T ss_pred EEeccCCCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC
Confidence 12 368999999999999 89999998 799999999994 4555532 578899999999998 89999984
Q ss_pred -CeEEEEECCCCCcccC-CeEEecCCC------------CeEEEEEccCCCeEEEEEeeCccccC
Q 036953 200 -HKLYIWPYNNKEEASS-PIIVLKTRR------------SLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 200 -d~V~IWDlrt~~~~~~-~~~~~~h~~------------sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
+.|++||+++.+.... ......+.. .|++++|+|++++|++++. ..++.|
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 5599999998874221 123344444 8999999999998877665 444433
No 69
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.89 E-value=9.6e-22 Score=208.96 Aligned_cols=206 Identities=17% Similarity=0.257 Sum_probs=157.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC--cEEEEe-cC-CCCCcEEEEEccCCCCEEEEEeCCCeEEEEE
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTG--NCLKVL-SG-HRRTPWVVRFHPLRSEILASGSLDHEVRLWD 166 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tg--k~v~~L-~g-H~~~VtsVafSP~dg~lLaSgS~DgtVrLWD 166 (792)
+.+|.+.|.+++|+++ +|++|+.|++|+|||+.++ +.+..+ .+ |...|++++|+| ++++|++++.|++|++||
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence 5689999999999987 9999999999999999875 455566 44 999999999999 899999999999999999
Q ss_pred CCC-------CcEEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCc-ccCCeEEecCCCCeEEEEEccCCC
Q 036953 167 ANT-------SECIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEE-ASSPIIVLKTRRSLRAVHFHPHAA 236 (792)
Q Consensus 167 l~t-------g~~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~-~~~~~~~~~h~~sVtsVafSPdG~ 236 (792)
+.. .+++..+ .|...|.+++|+|++++|++++. +.|++||++.... .........|...|++++|+|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 953 3455555 58899999999999999999994 5599999954322 111234556889999999999999
Q ss_pred eEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCC--CcEEEEccc
Q 036953 237 PFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDD--SRIDLQHAS 314 (792)
Q Consensus 237 ~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpD--Gr~lv~~~~ 314 (792)
.|++++.+..++. |....+.... ...+.+|...|++++|+|+ +..|+
T Consensus 167 ~l~s~s~D~~i~i-----------------------W~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~l~---- 215 (330)
T 2hes_X 167 LLASSSYDDTVRI-----------------------WKDYDDDWEC----VAVLNGHEGTVWSSDFDKTEGVFRLC---- 215 (330)
T ss_dssp EEEEEETTSCEEE-----------------------EEEETTEEEE----EEEECCCSSCEEEEEECCSSSSCEEE----
T ss_pred EEEEEcCCCeEEE-----------------------EECCCCCeeE----EEEccCCCCcEEEEEecCCCCeeEEE----
Confidence 7776665554443 3333321111 1234569999999999999 77888
Q ss_pred cccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 315 RRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 315 ~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-|+...+
T Consensus 216 ----------------------s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 216 ----------------------SGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ----------------------EEETTSCEEEEEEEEE
T ss_pred ----------------------EEeCCCeEEEEEecCC
Confidence 7899999999996543
No 70
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.89 E-value=7.8e-22 Score=212.47 Aligned_cols=228 Identities=11% Similarity=0.058 Sum_probs=173.5
Q ss_pred CcEEEEEeCCCeEEEEeccCCC----cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCP----LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~----L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
+..++++..++.+++|+..+.. +..| ..+....|++++++|++|+.|+.|+|||+.+++....+.+|...|++++
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 146 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLK 146 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEE
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEE
Confidence 3456777789999999987653 2334 4455557899999999999999999999999999888899999999999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecC
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKT 222 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h 222 (792)
|+| ++++|++++.|++|++||+++++.+..+. |...|.+++|+|++++|++++. +.|++||+++++..........+
T Consensus 147 ~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 225 (420)
T 3vl1_A 147 FFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENP 225 (420)
T ss_dssp ECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBT
T ss_pred ECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCC
Confidence 999 89999999999999999999998888774 8899999999999999999984 55999999988754311111124
Q ss_pred CCCeEEEEEc---------------------cCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEE
Q 036953 223 RRSLRAVHFH---------------------PHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHV 281 (792)
Q Consensus 223 ~~sVtsVafS---------------------PdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~ 281 (792)
...|.+++|. |+++.+++++.+. .+.+|+...+...
T Consensus 226 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----------------------~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 226 HDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-----------------------VITVHNVFSKEQT 282 (420)
T ss_dssp TCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----------------------CEEEEETTTCCEE
T ss_pred CCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-----------------------eEEEEECCCCcee
Confidence 5566666664 4554444433222 2333443333332
Q ss_pred EEeeccCcccCCCceEEEeEECCCCc-EEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 282 SLAAELPLMSSLPFLIVPSVSIDDSR-IDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 282 ~l~s~l~~l~gh~~~VwdV~~SpDGr-~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
... ...|...|++++|+|+|+ +++ +++.|.+|.-||.-.+
T Consensus 283 ~~~-----~~~~~~~v~~~~~~~~~~~~l~--------------------------~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 283 IQL-----PSKFTCSCNSLTVDGNNANYIY--------------------------AGYENGMLAQWDLRSP 323 (420)
T ss_dssp EEE-----CCTTSSCEEEEEECSSCTTEEE--------------------------EEETTSEEEEEETTCT
T ss_pred EEc-----ccccCCCceeEEEeCCCCCEEE--------------------------EEeCCCeEEEEEcCCC
Confidence 221 234788999999999999 888 7889999999997655
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.8e-21 Score=240.03 Aligned_cols=210 Identities=16% Similarity=0.224 Sum_probs=172.2
Q ss_pred CCCceEeeecccceee---CCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----cCCC
Q 036953 22 RRRARNVSRLLAHREI---SPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----LVPP 94 (792)
Q Consensus 22 ~s~~r~V~~l~~~rel---s~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----L~gH 94 (792)
..+.+.+|+....+.+ ..+...+.+++|+|+++++ ++++.|+.|++|+..+++ +.+|
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l----------------~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYI----------------ATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE----------------EEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEE----------------EEEeCCCeEEEEECCCCceEEEEcCC
Confidence 5567889988765443 3566788888998886644 455678899999988763 5689
Q ss_pred CCCeEEEEEcC--CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 95 PRSTIAAAFSP--DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 95 ~~~V~sLafSP--DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
...|.+++|+| ++..+++|+.|+.|++||+.+++++..+.+|.+.|++++|+| +++++++++.|++|++||+++++.
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcc
Confidence 99999999999 566899999999999999999999999999999999999999 999999999999999999987654
Q ss_pred EEEe--------------------------------------------------------ccCCCeeEEEEcCCCcEEEE
Q 036953 173 IGSC--------------------------------------------------------DFYRPIASIAFHAEGELLAV 196 (792)
Q Consensus 173 v~t~--------------------------------------------------------~h~s~V~sVafSpdG~~Las 196 (792)
...+ .+...+.+++|+|+++++++
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 857 (1249)
T 3sfz_A 778 RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI 857 (1249)
T ss_dssp EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEE
T ss_pred cceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEE
Confidence 4332 34567888999999999988
Q ss_pred EcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 197 ASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 197 gSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
++. +.|++||+.++... .....|...|++++|+|+++.+++++.+..++.|+
T Consensus 858 ~~~dg~v~vwd~~~~~~~---~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 858 ALSQYCVELWNIDSRLKV---ADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp ECSSSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EeCCCeEEEEEcCCCcee---eecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 884 44999999877643 34567889999999999999888887766666554
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=1.3e-21 Score=203.98 Aligned_cols=248 Identities=10% Similarity=0.079 Sum_probs=181.0
Q ss_pred CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC-------cCCCCCCeEEEEEcCCCC-EE
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP-------LVPPPRSTIAAAFSPDGR-TL 110 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~-------L~gH~~~V~sLafSPDG~-~L 110 (792)
.+...+.+++|+|++.++++ +..|+.|++|+..... +.+|...|.+++|+|+++ +|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~----------------~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 72 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLI----------------TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQI 72 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEE----------------EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEE
T ss_pred CCCCcEEEEEEcCCCCEEEE----------------EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEE
Confidence 56678999999998765444 4566777777765432 347899999999999999 99
Q ss_pred EEEECCCeEEEEEC-CCCcEEEEecC--CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC---------CcEEEEecc
Q 036953 111 ASTHGDHTVKIIDC-QTGNCLKVLSG--HRRTPWVVRFHPLRSEILASGSLDHEVRLWDANT---------SECIGSCDF 178 (792)
Q Consensus 111 aSGS~DGtVrIWDl-~tgk~v~~L~g--H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~t---------g~~v~t~~h 178 (792)
++|+.|+.|++||+ .+++ ...+.+ |...|.+++|+| ++++++++.|+.|++||+++ ++++..+.+
T Consensus 73 ~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPS-FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp EEEETTSCEEEECSSSSSS-EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred EEEcCCCeEEEEEeccCCc-eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEee
Confidence 99999999999999 7775 477888 999999999998 78999999999999999988 777777788
Q ss_pred CCCeeEEEEcCCCcEEEEEc-CCeEEEEECCC-CCcccCCeEEecCCCCeEEEEEcc-CCCeEEEEEeeCc-----cccC
Q 036953 179 YRPIASIAFHAEGELLAVAS-GHKLYIWPYNN-KEEASSPIIVLKTRRSLRAVHFHP-HAAPFVLTAEVND-----LDSS 250 (792)
Q Consensus 179 ~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt-~~~~~~~~~~~~h~~sVtsVafSP-dG~~LlaS~s~~d-----Lrs~ 250 (792)
...+.+++|++++ |++++ ++.|++||+++ ..... ......+...|.+++|+| +++.+++++.+.. ++..
T Consensus 150 ~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 150 KNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp CCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred CCceEEEEecCCc--EEEEeCCCeEEEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 9999999999988 66665 66799999988 54322 233455788999999999 9998877776433 3332
Q ss_pred ------CCceeeecCCC------------cccCCCCceEEEEecCCCEEEEee-----ccCcccCC-CceEEEeEECCCC
Q 036953 251 ------DSSMTRATSPG------------YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSL-PFLIVPSVSIDDS 306 (792)
Q Consensus 251 ------d~~~~l~t~sg------------~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh-~~~VwdV~~SpDG 306 (792)
.....+..... ...+.+....++.+..+..+.++. ....+.+| ...|++++ |||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~ 304 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSD 304 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECS
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCC
Confidence 22223332211 223333333333333333333333 12245566 88888888 888
Q ss_pred cEEE
Q 036953 307 RIDL 310 (792)
Q Consensus 307 r~lv 310 (792)
++|+
T Consensus 305 ~~l~ 308 (342)
T 1yfq_A 305 NILC 308 (342)
T ss_dssp SEEE
T ss_pred CeEE
Confidence 8888
No 73
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-20 Score=193.69 Aligned_cols=249 Identities=12% Similarity=0.133 Sum_probs=192.9
Q ss_pred CCCceEeeecccceeeC---CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC-------Cc
Q 036953 22 RRRARNVSRLLAHREIS---PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC-------PL 91 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels---~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-------~L 91 (792)
..+...+|+....+... .+...+..+.|++++.+ ++++..++.+++|+.... .+
T Consensus 37 ~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------------l~~~~~dg~i~~~~~~~~~~~~~~~~~ 100 (313)
T 3odt_A 37 RDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKEL----------------LLFGGKDTMINGVPLFATSGEDPLYTL 100 (313)
T ss_dssp TTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTE----------------EEEEETTSCEEEEETTCCTTSCC-CEE
T ss_pred cCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCE----------------EEEecCCCeEEEEEeeecCCCCcccch
Confidence 55678899886654333 34567788888887654 455577888888887532 35
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc
Q 036953 92 VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSE 171 (792)
Q Consensus 92 ~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~ 171 (792)
.+|...|.+++| +++.|++++.|+.|++|| .++.+..+..|...|.++.|.|.+++++++++.|+.|++|| ..+
T Consensus 101 ~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~ 174 (313)
T 3odt_A 101 IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDK 174 (313)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTE
T ss_pred hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCc
Confidence 689999999999 688999999999999999 67888899999999999999987889999999999999999 445
Q ss_pred EEEEec--cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccc
Q 036953 172 CIGSCD--FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLD 248 (792)
Q Consensus 172 ~v~t~~--h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLr 248 (792)
.+..+. +...+.+++|+|++. |++++ ++.|++||+++.+... ....|...|++++|+|++. +++++.+..
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~-l~~~~~dg~-- 247 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLR---TYEGHESFVYCIKLLPNGD-IVSCGEDRT-- 247 (313)
T ss_dssp EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECTTSC-EEEEETTSE--
T ss_pred eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhh---hhhcCCceEEEEEEecCCC-EEEEecCCE--
Confidence 555553 888999999999999 66665 6669999999877432 4556889999999999994 666665443
Q ss_pred cCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccc
Q 036953 249 SSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSA 328 (792)
Q Consensus 249 s~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~ 328 (792)
+.+|+..++....... .|...|++++|+|+|++++
T Consensus 248 ---------------------v~iwd~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~------------------ 282 (313)
T 3odt_A 248 ---------------------VRIWSKENGSLKQVIT------LPAISIWSVDCMSNGDIIV------------------ 282 (313)
T ss_dssp ---------------------EEEECTTTCCEEEEEE------CSSSCEEEEEECTTSCEEE------------------
T ss_pred ---------------------EEEEECCCCceeEEEe------ccCceEEEEEEccCCCEEE------------------
Confidence 3344444444433332 3777899999999999665
Q ss_pred cccccCCCCCccccccccccccCCC
Q 036953 329 SLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 329 ~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
++.|.+|.-|+...++
T Consensus 283 ---------~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 283 ---------GSSDNLVRIFSQEKSR 298 (313)
T ss_dssp ---------EETTSCEEEEESCGGG
T ss_pred ---------EeCCCcEEEEeCCCCc
Confidence 6778888888876653
No 74
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=3.5e-21 Score=212.03 Aligned_cols=238 Identities=15% Similarity=0.188 Sum_probs=178.2
Q ss_pred cEEEEEeCCCeEEEEeccC----------C----CcCCCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcE-----
Q 036953 70 RGLVSWVEAESLRHLSAKY----------C----PLVPPPRSTIAAAFSPDGR-TLASTHGDHTVKIIDCQTGNC----- 129 (792)
Q Consensus 70 ~~L~S~s~d~sIrvWd~~t----------~----~L~gH~~~V~sLafSPDG~-~LaSGS~DGtVrIWDl~tgk~----- 129 (792)
..++++..++.|++|+... . .+.+|...|++++|+|++. +|++|+.||.|++||+.++..
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 221 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI 221 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee
Confidence 4567777889999999875 2 3468999999999999888 999999999999999987422
Q ss_pred --EEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC---cEEEEe-ccCCCeeEEEEcCCCc-EEEEEc-CCe
Q 036953 130 --LKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS---ECIGSC-DFYRPIASIAFHAEGE-LLAVAS-GHK 201 (792)
Q Consensus 130 --v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg---~~v~t~-~h~s~V~sVafSpdG~-~LasgS-dd~ 201 (792)
...+.+|...|.+++|+|.++.+|++++.|+.|++||++++ +++..+ .|...|++++|+|+++ +|++++ ++.
T Consensus 222 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~ 301 (430)
T 2xyi_A 222 DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301 (430)
T ss_dssp ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe
Confidence 46677899999999999977889999999999999999986 455555 6889999999999997 677877 556
Q ss_pred EEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe-eCccccCCCceeeecCC--CcccCCCCceEEEEecCC
Q 036953 202 LYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE-VNDLDSSDSSMTRATSP--GYLRYPPPAVFVANAQSG 278 (792)
Q Consensus 202 V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s-~~dLrs~d~~~~l~t~s--g~~~~p~~~~~l~~~ssG 278 (792)
|++||++..... ......|...|++++|+|+++.++++++ +..|..|+....-.... .....+ .
T Consensus 302 v~vwd~~~~~~~--~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----------~ 368 (430)
T 2xyi_A 302 VALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP-----------P 368 (430)
T ss_dssp EEEEETTCTTSC--SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC-----------T
T ss_pred EEEEeCCCCCCC--eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC-----------c
Confidence 999999885432 2345568999999999999987666554 44444333221000000 000000 0
Q ss_pred CEEEEeeccCcccCCCceEEEeEECCCCc-EEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 279 DHVSLAAELPLMSSLPFLIVPSVSIDDSR-IDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 279 ~~~~l~s~l~~l~gh~~~VwdV~~SpDGr-~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
..+ ..+.+|...|.++.|+|+|+ +++ ++++|++|.-|++...
T Consensus 369 ~~~------~~~~~h~~~v~~~~~~p~~~~~l~--------------------------s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 369 ELL------FIHGGHTAKISDFSWNPNEPWIIC--------------------------SVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TEE------EECCCCSSCEEEEEECSSSTTEEE--------------------------EEETTSEEEEEEECHH
T ss_pred ceE------EEcCCCCCCceEEEECCCCCCEEE--------------------------EEECCCCEEEeEcccc
Confidence 111 12345888999999999999 777 6888888888886543
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=5e-22 Score=207.52 Aligned_cols=247 Identities=13% Similarity=0.130 Sum_probs=186.4
Q ss_pred CCCceeeeEEeeCCCce-EeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc-----CCCCCCeEEEEEcCC---CCE
Q 036953 39 PKTKYVPKRQWVDASKL-KTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL-----VPPPRSTIAAAFSPD---GRT 109 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~l-la~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L-----~gH~~~V~sLafSPD---G~~ 109 (792)
.+...+..++|+|++.. +++|.. ...|+.|++|+..+++. .+|...|.+++|+|+ +++
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~-------------~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 82 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNF-------------ARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRY 82 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC---------------CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCC
T ss_pred CCCCceEEEEEcCCCceEEEecCc-------------cCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCce
Confidence 36668899999998743 333310 00277788888776532 368899999999998 799
Q ss_pred EEEEECCCeEEEEECCCCc-EEEEecCCCCCcEEEEE------ccCCCCEEEEEeCCCeEEEEECCCCc-EEEEec-c--
Q 036953 110 LASTHGDHTVKIIDCQTGN-CLKVLSGHRRTPWVVRF------HPLRSEILASGSLDHEVRLWDANTSE-CIGSCD-F-- 178 (792)
Q Consensus 110 LaSGS~DGtVrIWDl~tgk-~v~~L~gH~~~VtsVaf------SP~dg~lLaSgS~DgtVrLWDl~tg~-~v~t~~-h-- 178 (792)
|++++.|+.|++||+.+++ .+..+.+|...|.++.| +| ++++|++++.|++|++||+++++ ++..+. +
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCC
Confidence 9999999999999999888 88999999999999965 67 88999999999999999999886 566663 2
Q ss_pred --CCCeeEEE----EcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc---CCCeEEEEEeeCccc
Q 036953 179 --YRPIASIA----FHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP---HAAPFVLTAEVNDLD 248 (792)
Q Consensus 179 --~s~V~sVa----fSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP---dG~~LlaS~s~~dLr 248 (792)
...+.+++ |++++++|++++. +.|++||+++.+. .....+...|++++|+| ++..+++++.+..+.
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 33788888 7889999999985 5699999998874 23566788999999999 889887776555444
Q ss_pred cCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCc-EEEEccccccCCCCcccccc
Q 036953 249 SSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSR-IDLQHASRRASSSNMQIEPS 327 (792)
Q Consensus 249 s~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr-~lv~~~~~~~~Sg~v~~~~s 327 (792)
.++ ...+....... ...+.+|...|+++.|+|+|+ +++
T Consensus 238 i~d-----------------------~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~----------------- 276 (357)
T 3i2n_A 238 VFD-----------------------MRTQHPTKGFA-SVSEKAHKSTVWQVRHLPQNRELFL----------------- 276 (357)
T ss_dssp EEE-----------------------EEEEETTTEEE-EEEEECCSSCEEEEEEETTEEEEEE-----------------
T ss_pred EEe-----------------------CcCCCccccee-eeccCCCcCCEEEEEECCCCCcEEE-----------------
Confidence 332 21111100000 001235889999999999999 777
Q ss_pred ccccccCCCCCccccccccccccCCC
Q 036953 328 ASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 328 ~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
+++.|.+|.-|+...+.
T Consensus 277 ---------~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 277 ---------TAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp ---------EEETTSEEEEEEEECCS
T ss_pred ---------EEeCCCcEEEeecCCCc
Confidence 78889999999987664
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=1.2e-20 Score=204.97 Aligned_cols=226 Identities=16% Similarity=0.208 Sum_probs=182.8
Q ss_pred cEEEEEeCCCeEEEEeccCCCc-----CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 70 RGLVSWVEAESLRHLSAKYCPL-----VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 70 ~~L~S~s~d~sIrvWd~~t~~L-----~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
..+++++.++.|++|+..++.. ..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 183 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLS 183 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEE
Confidence 4577788899999999987642 24889999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCC-CcEEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEec
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANT-SECIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLK 221 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~t-g~~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~ 221 (792)
|++ +++++++.|+.|++||++. +..+..+ .|...|.+++|+|++++|++++. +.|++||+++.+.. .....
T Consensus 184 ~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~---~~~~~ 257 (401)
T 4aez_A 184 WNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK---FTKTN 257 (401)
T ss_dssp EET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE---EEECC
T ss_pred ECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc---EEecC
Confidence 954 7999999999999999994 5555555 58899999999999999999985 55999999987643 24456
Q ss_pred CCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeE
Q 036953 222 TRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSV 301 (792)
Q Consensus 222 h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~ 301 (792)
|...|.+++|+|++..++++++.. ....+.+|+..++....... +...|.+++
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs--------------------~d~~i~i~d~~~~~~~~~~~-------~~~~v~~~~ 310 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGT--------------------MDKQIHFWNAATGARVNTVD-------AGSQVTSLI 310 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCT--------------------TTCEEEEEETTTCCEEEEEE-------CSSCEEEEE
T ss_pred CcceEEEEEECCCCCCEEEEecCC--------------------CCCEEEEEECCCCCEEEEEe-------CCCcEEEEE
Confidence 889999999999998888877410 01235566666665554443 556799999
Q ss_pred ECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 302 SIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 302 ~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
|+|+|+++++. +|..|.+|.-|+...+
T Consensus 311 ~s~~~~~l~~~------------------------~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 311 WSPHSKEIMST------------------------HGFPDNNLSIWSYSSS 337 (401)
T ss_dssp ECSSSSEEEEE------------------------ECTTTCEEEEEEEETT
T ss_pred ECCCCCeEEEE------------------------eecCCCcEEEEecCCc
Confidence 99999999810 1556778888886543
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=4.8e-22 Score=218.89 Aligned_cols=205 Identities=14% Similarity=0.108 Sum_probs=160.2
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcE--EEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC
Q 036953 92 VPPPRSTIAAAFSP-DGRTLASTHGDHTVKIIDCQTGNC--LKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDAN 168 (792)
Q Consensus 92 ~gH~~~V~sLafSP-DG~~LaSGS~DGtVrIWDl~tgk~--v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~ 168 (792)
.+|...|++++|+| ++++||+|+.||+|+|||+.+++. ...+.+|.+.|++++|+|.++++|++|+.|++|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46888899999999 678999999999999999987754 445568999999999998778999999999999999998
Q ss_pred CCcEEEEec---cCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe-
Q 036953 169 TSECIGSCD---FYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE- 243 (792)
Q Consensus 169 tg~~v~t~~---h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s- 243 (792)
++....... +...+.+++|++++++|++++. +.|++||++.... .....|...|++++|+|+++.++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----WNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC----CCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee----EEEecccceEEeeeecCCCceEEEEecC
Confidence 765544432 3446789999999999999995 5599999975432 234568899999999999987777665
Q ss_pred eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCcc
Q 036953 244 VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQ 323 (792)
Q Consensus 244 ~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~ 323 (792)
+..++.|+ ...+... .......+|...|.+++|+|||++|+
T Consensus 272 d~~v~iwd-----------------------~~~~~~~---~~~~~~~~h~~~v~~~~~spdg~~l~------------- 312 (435)
T 4e54_B 272 DQTVKIWD-----------------------LRQVRGK---ASFLYSLPHRHPVNAACFSPDGARLL------------- 312 (435)
T ss_dssp TSBCCEEE-----------------------TTTCCSS---SCCSBCCBCSSCEEECCBCTTSSEEE-------------
T ss_pred cceeeEEe-----------------------ccccccc---ceEEEeeeccccccceeECCCCCeeE-------------
Confidence 44444332 2111110 01112235889999999999999999
Q ss_pred ccccccccccCCCCCccccccccccccCC
Q 036953 324 IEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 324 ~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|.+|.-|++..+
T Consensus 313 -------------s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 313 -------------TTDQKSEIRVYSASQW 328 (435)
T ss_dssp -------------EEESSSCEEEEESSSS
T ss_pred -------------EEcCCCEEEEEECCCC
Confidence 8899999999997655
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.9e-21 Score=202.95 Aligned_cols=211 Identities=21% Similarity=0.238 Sum_probs=169.8
Q ss_pred CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC--CCcEEEEecCCCCCcEEEEEccCC--CCEEEEEeCCCeEEEE
Q 036953 90 PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQ--TGNCLKVLSGHRRTPWVVRFHPLR--SEILASGSLDHEVRLW 165 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~--tgk~v~~L~gH~~~VtsVafSP~d--g~lLaSgS~DgtVrLW 165 (792)
.+.+|...|++++|+|++++|++|+.|+.|+|||+. +++.+..+.+|...|++++|++ + +++|++++.|++|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSCEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC-CCCCCEEEEeccCCEEEEE
Confidence 456899999999999999999999999999999998 5567788999999999999987 5 8999999999999999
Q ss_pred ECCCCc--EEEEe-ccCCCeeEEEEcCC--CcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc------
Q 036953 166 DANTSE--CIGSC-DFYRPIASIAFHAE--GELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP------ 233 (792)
Q Consensus 166 Dl~tg~--~v~t~-~h~s~V~sVafSpd--G~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP------ 233 (792)
|+++++ .+..+ .|...|.+++|+|+ +++|++++ ++.|++||++...... ......|...|++++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEEEEECCCC----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEEEEEcCcccccc
Confidence 999986 55555 48899999999999 89999988 5569999998875443 345567899999999999
Q ss_pred -------CCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCC-
Q 036953 234 -------HAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDD- 305 (792)
Q Consensus 234 -------dG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpD- 305 (792)
++..+++++.+.. +.+|+...+...... ...+.+|...|.+++|+|+
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~-----------------------i~i~d~~~~~~~~~~--~~~~~~h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNL-----------------------VKIWKYNSDAQTYVL--ESTLEGHSDWVRDVAWSPTV 218 (379)
T ss_dssp ------CTTCEEEEEETTSC-----------------------EEEEEEETTTTEEEE--EEEECCCSSCEEEEEECCCC
T ss_pred ccccCCCCCCEEEEEeCCCe-----------------------EEEEEecCCCcceee--EEEEecccCcEeEEEECCCC
Confidence 5776666665443 333443333221110 1124458999999999999
Q ss_pred --CcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 306 --SRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 306 --Gr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
|++|+ +++.|++|.-|+...++
T Consensus 219 ~~~~~l~--------------------------s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 219 LLRSYLA--------------------------SVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSSEEEE--------------------------EEETTSCEEEEEESSTT
T ss_pred CCCCeEE--------------------------EEeCCCEEEEEeCCCCC
Confidence 89999 78899999999977663
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.88 E-value=2.9e-22 Score=211.66 Aligned_cols=210 Identities=18% Similarity=0.184 Sum_probs=156.8
Q ss_pred CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEcc-CCCCEEEEEeCCCeEEEEE
Q 036953 90 PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHP-LRSEILASGSLDHEVRLWD 166 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP-~dg~lLaSgS~DgtVrLWD 166 (792)
.+.+|.+.|++++|+|+|++|++|+.|++|+|||+.+++ .+..+.+|.+.|++++|++ .++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 356899999999999999999999999999999998775 4678899999999999975 2478999999999999999
Q ss_pred CCCCc--EEEEe-ccCCCeeEEEEcCC--CcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCC----
Q 036953 167 ANTSE--CIGSC-DFYRPIASIAFHAE--GELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAA---- 236 (792)
Q Consensus 167 l~tg~--~v~t~-~h~s~V~sVafSpd--G~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~---- 236 (792)
+++++ .+..+ .|...|.+++|+|+ +.+|++++. +.|++||++.............|...|.+++|+|+..
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 99874 45555 58899999999998 789999984 5599999987642210122345788899999999842
Q ss_pred -------------eEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEEC
Q 036953 237 -------------PFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSI 303 (792)
Q Consensus 237 -------------~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~S 303 (792)
.|++++.+ ..+.+|+...+..... ...+.+|...|++++|+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D-----------------------~~v~lWd~~~~~~~~~---~~~l~~h~~~V~~v~~s 221 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCD-----------------------NLIKLWKEEEDGQWKE---EQKLEAHSDWVRDVAWA 221 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTT-----------------------SBCCEEEECTTSCEEE---EECCBCCSSCEEEEECC
T ss_pred cccccccCccccceEEEecCC-----------------------CeEEEEEeCCCCccce---eeecccCCCceEEEEec
Confidence 22222212 2344455433221111 12356799999999999
Q ss_pred CCC----cEEEEccccccCCCCccccccccccccCCCCCccccccccccccC
Q 036953 304 DDS----RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFP 351 (792)
Q Consensus 304 pDG----r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~ 351 (792)
|++ ++|+ +++.|++|.-|+...
T Consensus 222 p~~~~~~~~la--------------------------s~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 222 PSIGLPTSTIA--------------------------SCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCSSCSCCEEE--------------------------EEETTCEEEEEECSS
T ss_pred CCCCCCCceEE--------------------------EEcCCCeEEEEEccC
Confidence 997 7888 899999999998654
No 80
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.88 E-value=8.1e-21 Score=195.03 Aligned_cols=209 Identities=15% Similarity=0.167 Sum_probs=165.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC----cEEEEecCCCCCcEEEEEccC-CCCEEEEEeCCCeEEEE
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTG----NCLKVLSGHRRTPWVVRFHPL-RSEILASGSLDHEVRLW 165 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tg----k~v~~L~gH~~~VtsVafSP~-dg~lLaSgS~DgtVrLW 165 (792)
+.+|.+.|++++|+|++++|++|+.||.|+|||+.++ +....+.+|...|++++|+|. ++++|++++.|++|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 5689999999999999999999999999999999876 467778899999999999984 48999999999999999
Q ss_pred ECCCC---------cEEEEe-ccCCCeeEEEEcCC--CcEEEEEc-CCeEEEEECCCCCcccCCeE----------EecC
Q 036953 166 DANTS---------ECIGSC-DFYRPIASIAFHAE--GELLAVAS-GHKLYIWPYNNKEEASSPII----------VLKT 222 (792)
Q Consensus 166 Dl~tg---------~~v~t~-~h~s~V~sVafSpd--G~~LasgS-dd~V~IWDlrt~~~~~~~~~----------~~~h 222 (792)
|++++ +++..+ .|...|.+++|+|+ +++|++++ ++.|++||+++.+....... ...+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 99886 445555 58899999999999 99999988 55599999988775432111 1146
Q ss_pred CCCeEEEEEccC---CCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEE
Q 036953 223 RRSLRAVHFHPH---AAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVP 299 (792)
Q Consensus 223 ~~sVtsVafSPd---G~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~Vwd 299 (792)
...+.+++|+|+ +..+++++.+. ...++....+....+. .+.+|...|.+
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~~~----~~~~h~~~i~~ 219 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQ-----------------------AIIYQRGKDGKLHVAA----KLPGHKSLIRS 219 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTE-----------------------EEEEEECTTSCEEEEE----ECCCCCSCEEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCC-----------------------cEEEEccCCCceeeee----ecCCCCcceeE
Confidence 778999999997 77565555322 1223333333332222 24568999999
Q ss_pred eEECCCC----cEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 300 SVSIDDS----RIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 300 V~~SpDG----r~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
++|+|+| ++|+ +++.|++|.-||...+
T Consensus 220 ~~~~p~~~~~~~~l~--------------------------s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 220 ISWAPSIGRWYQLIA--------------------------TGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEECCCSSCSSEEEE--------------------------EEETTSCEEEEEEEEC
T ss_pred EEECCCCCCcceEEE--------------------------EEcCCCeEEEEeCCCC
Confidence 9999998 8888 7899999999997655
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.7e-21 Score=198.96 Aligned_cols=206 Identities=14% Similarity=0.208 Sum_probs=170.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS 170 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg 170 (792)
+.+|...|++++|+|++++|++++.|+.|+|||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||+.++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC
Confidence 568999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cEEEEeccCCCeeEEEEcCCCcEEEEEcC------CeEEEEECCCCCccc--------CCeEEecCCC--CeEEEEEccC
Q 036953 171 ECIGSCDFYRPIASIAFHAEGELLAVASG------HKLYIWPYNNKEEAS--------SPIIVLKTRR--SLRAVHFHPH 234 (792)
Q Consensus 171 ~~v~t~~h~s~V~sVafSpdG~~LasgSd------d~V~IWDlrt~~~~~--------~~~~~~~h~~--sVtsVafSPd 234 (792)
+++..+.+...+.+++|+|++++|+++++ +.|++||++...... .......+.. .+.+++|+|+
T Consensus 107 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 107 QCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp CEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred cEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 99999999999999999999999999885 469999998765322 1122233444 8999999999
Q ss_pred CCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecC-CCEEEEeeccCcccCCCceEEEeEECCCCcEEEEcc
Q 036953 235 AAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQS-GDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHA 313 (792)
Q Consensus 235 G~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ss-G~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~ 313 (792)
++.+++++.+.. +.+|+... +..... +..|...|.+++|+|+|++|+
T Consensus 187 ~~~l~~~~~dg~-----------------------i~i~d~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~--- 234 (369)
T 3zwl_B 187 GKYIIAGHKDGK-----------------------ISKYDVSNNYEYVDS------IDLHEKSISDMQFSPDLTYFI--- 234 (369)
T ss_dssp GCEEEEEETTSE-----------------------EEEEETTTTTEEEEE------EECCSSCEEEEEECTTSSEEE---
T ss_pred CCEEEEEcCCCE-----------------------EEEEECCCCcEeEEE------EecCCCceeEEEECCCCCEEE---
Confidence 998777664443 33344333 222222 233788999999999999999
Q ss_pred ccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 314 SRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 314 ~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-||...+
T Consensus 235 -----------------------~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 235 -----------------------TSSRDTNSFLVDVSTL 250 (369)
T ss_dssp -----------------------EEETTSEEEEEETTTC
T ss_pred -----------------------EecCCceEEEEECCCC
Confidence 6778899999996544
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.9e-22 Score=214.40 Aligned_cols=258 Identities=11% Similarity=0.068 Sum_probs=183.6
Q ss_pred CCCceeeeEEeeC-CCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC---C-----CcC-CCCCCeEEEEEcCCCC
Q 036953 39 PKTKYVPKRQWVD-ASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY---C-----PLV-PPPRSTIAAAFSPDGR 108 (792)
Q Consensus 39 ~~tk~V~s~aWsp-d~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t---~-----~L~-gH~~~V~sLafSPDG~ 108 (792)
.+...+.+++|++ ++. .+++++.|++|++|+... + .+. +|...|.+++|+|+++
T Consensus 61 ~h~~~V~~~~~s~~~~~----------------~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 61 NEPNSITSSAVSPGETP----------------YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD 124 (437)
T ss_dssp TTTSCEEEEEEECSSSC----------------EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS
T ss_pred CCCCceEEEEECCCCCC----------------EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC
Confidence 4556788888887 655 455667899999999865 2 122 6899999999999999
Q ss_pred EEEEEECCCeEEEEECC---CCcEEEEecC------------CCCCcEEEE--EccCCCCEEEEEeCCCeEEEEECCCCc
Q 036953 109 TLASTHGDHTVKIIDCQ---TGNCLKVLSG------------HRRTPWVVR--FHPLRSEILASGSLDHEVRLWDANTSE 171 (792)
Q Consensus 109 ~LaSGS~DGtVrIWDl~---tgk~v~~L~g------------H~~~VtsVa--fSP~dg~lLaSgS~DgtVrLWDl~tg~ 171 (792)
+|++++.|++|++||+. +++.+..+.+ +...+.++. +++ ++.+|++++.|++|++||+++++
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCe
Confidence 99999999999999994 5555444332 455666666 556 78999999999999999999999
Q ss_pred EEEEec---cCCCeeEEEEcCCCcEEEEEcCC-eEEEEECCCCCcccCCeEEecCCCCeEEEEEcc----CCCeEEEEEe
Q 036953 172 CIGSCD---FYRPIASIAFHAEGELLAVASGH-KLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP----HAAPFVLTAE 243 (792)
Q Consensus 172 ~v~t~~---h~s~V~sVafSpdG~~LasgSdd-~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP----dG~~LlaS~s 243 (792)
++..+. |...|.+++|+|++++|++++.+ .|++||+++++... .....|...|++++|+| ++..+++++.
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR--SWSFGDHAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE--EEBCTTCEEEEEEEECTTTCTTEEEEEEEST
T ss_pred eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE--EEecCCCCceEEEEeccccCCCccEEEEEcC
Confidence 988884 68999999999999999999954 49999999876432 11236777899997765 4655555544
Q ss_pred eCccccCCCc-----eeeecCCCc---ccCCCCceEEEEecCCCEEEEeeccCcccC--CCceEEEeEECCCCcEEEEcc
Q 036953 244 VNDLDSSDSS-----MTRATSPGY---LRYPPPAVFVANAQSGDHVSLAAELPLMSS--LPFLIVPSVSIDDSRIDLQHA 313 (792)
Q Consensus 244 ~~dLrs~d~~-----~~l~t~sg~---~~~p~~~~~l~~~ssG~~~~l~s~l~~l~g--h~~~VwdV~~SpDGr~lv~~~ 313 (792)
+..++.|+.. ..+...... ..+.+. +..+ ....+.+ |...|++++|+ +|++|+
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l----~~~~~~~~~~~~~v~~l~~~-~~~~l~--- 344 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPI---------EKGL----EELNFCGIRSLNALSTISVS-NDKILL--- 344 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCB---------CSSG----GGCCCCCCCSGGGGCCEEEE-TTEEEE---
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceeccc---------cccc----ccceecccccCCceEEEEEC-CceEEE---
Confidence 4334433322 222211110 011110 0000 1112334 88889999999 888888
Q ss_pred ccccCCCCccccccccccccCCCCCccccccccccccCCCCC
Q 036953 314 SRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIPP 355 (792)
Q Consensus 314 ~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p~ 355 (792)
+++.|++|.-||+..++..
T Consensus 345 -----------------------s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 345 -----------------------TDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp -----------------------EEGGGTEEEEEETTCGGGC
T ss_pred -----------------------ecCCCCeEEEEECCCcccc
Confidence 8999999999998776433
No 83
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.88 E-value=9.6e-22 Score=209.14 Aligned_cols=205 Identities=18% Similarity=0.190 Sum_probs=158.8
Q ss_pred CCCceEeeecccc--eee---CCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC------
Q 036953 22 RRRARNVSRLLAH--REI---SPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP------ 90 (792)
Q Consensus 22 ~s~~r~V~~l~~~--rel---s~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~------ 90 (792)
..+.+.+|+.... +.+ ..+...+..++|++++++ +++++.|+.|++|+...+.
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~----------------l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNR----------------IVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCC----------------EEEEETTSSEEEC------CCCCEE
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCE----------------EEEEeCCCeEEEEEcCCCCceeeee
Confidence 4677889988765 333 245667889999988654 4555778889999887543
Q ss_pred -cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc---EEEEecC-CCCCcEEEEEccCCCCEEEEEeCCCeEEEE
Q 036953 91 -LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN---CLKVLSG-HRRTPWVVRFHPLRSEILASGSLDHEVRLW 165 (792)
Q Consensus 91 -L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk---~v~~L~g-H~~~VtsVafSP~dg~lLaSgS~DgtVrLW 165 (792)
+.+|...|.+++|+|++++|++++.|+.|++||+.+++ ....+.+ |...|++++|+| ++++|++++.|++|++|
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw 173 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVL 173 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEE
T ss_pred EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEE
Confidence 56899999999999999999999999999999999887 4677887 999999999999 89999999999999999
Q ss_pred ECC------------------CCcEEEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccC-CeEEecCCCC
Q 036953 166 DAN------------------TSECIGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASS-PIIVLKTRRS 225 (792)
Q Consensus 166 Dl~------------------tg~~v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~-~~~~~~h~~s 225 (792)
|++ .++++..+.|...|.+++|+|++++|++++ ++.|++||+++.+.... ......|...
T Consensus 174 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 253 (377)
T 3dwl_C 174 SAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP 253 (377)
T ss_dssp EECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC
T ss_pred EEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc
Confidence 985 344566667888999999999999999998 55699999998875210 1245568889
Q ss_pred eEEEEEccCCCeEEEEEee
Q 036953 226 LRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 226 VtsVafSPdG~~LlaS~s~ 244 (792)
|++++|+|+++.|+ ++.+
T Consensus 254 v~~~~~s~~~~~l~-~~~~ 271 (377)
T 3dwl_C 254 LRSLLWANESAIVA-AGYN 271 (377)
T ss_dssp EEEEEEEETTEEEE-EESS
T ss_pred eEEEEEcCCCCEEE-EEcC
Confidence 99999999998554 4443
No 84
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2.7e-21 Score=210.97 Aligned_cols=228 Identities=13% Similarity=0.073 Sum_probs=148.9
Q ss_pred CCcEEEEEeCCCeEEEEeccCC---------CcCCCCCCeEEEEEcC--------CCCEEEEEECCCeEEEEECCCCcEE
Q 036953 68 AKRGLVSWVEAESLRHLSAKYC---------PLVPPPRSTIAAAFSP--------DGRTLASTHGDHTVKIIDCQTGNCL 130 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~---------~L~gH~~~V~sLafSP--------DG~~LaSGS~DGtVrIWDl~tgk~v 130 (792)
....+++++.|++|++|+...+ .+.+|.+.|++++|+| |+++|++|+.|++|+|||+.++.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 4456889999999999998654 3679999999999997 8899999999999999999988888
Q ss_pred EEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------------------------ccCCCeeE
Q 036953 131 KVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC--------------------------DFYRPIAS 184 (792)
Q Consensus 131 ~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--------------------------~h~s~V~s 184 (792)
..+.+|...|.+++|+|++..+|++++.|++|++||+++++..... .+...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 8888899999999999944568999999999999999987543321 24567888
Q ss_pred EEEc-CCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccC---CCceeeecC
Q 036953 185 IAFH-AEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS---DSSMTRATS 259 (792)
Q Consensus 185 VafS-pdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~---d~~~~l~t~ 259 (792)
+.|+ ++++.|++++ ++.+++||+...+... ....+...+..+.+.|+.+.+............ +..+...
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-- 334 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYN---EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA-- 334 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE--
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCc---eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE--
Confidence 8886 8999999998 4559999998776433 233455556666666654422110000000000 0000000
Q ss_pred CCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 260 PGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 260 sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
......+.+|+..++..... ..+|...|++++|+|||++|+
T Consensus 335 ----gs~Dg~V~lwd~~~~~~~~~------~~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 335 ----HSQHGLIQLINTYEKDSNSI------PIQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp ----ETTTTEEEEEETTCTTCCEE------EEECSSCEEEEEECTTSSEEE
T ss_pred ----ECCCCEEEEEECCCCcEEEE------ecCCCCcEEEEEEcCCCCEEE
Confidence 00112344455444443222 234778999999999999999
No 85
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=1.7e-20 Score=211.06 Aligned_cols=204 Identities=13% Similarity=0.163 Sum_probs=160.6
Q ss_pred CCCceEeeecccc-----------eeeCCCCceeeeEEeeCCCceEeecCCC----cee---------------------
Q 036953 22 RRRARNVSRLLAH-----------REISPKTKYVPKRQWVDASKLKTCGPSD----SSV--------------------- 65 (792)
Q Consensus 22 ~s~~r~V~~l~~~-----------rels~~tk~V~s~aWspd~~lla~G~~a----~sv--------------------- 65 (792)
..+.+.+|+.... +.+..+...+..++|+++++.++++... ..+
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINA 165 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEE
T ss_pred CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEE
Confidence 4567899988532 2333466789999999999987665432 111
Q ss_pred ----ecCCcEEEEEeCCCeEEEEeccCC----CcCCCCC---CeEEEEEcCC-CCEEEEEECCCeEEEEECCCCcEEEEe
Q 036953 66 ----RDAKRGLVSWVEAESLRHLSAKYC----PLVPPPR---STIAAAFSPD-GRTLASTHGDHTVKIIDCQTGNCLKVL 133 (792)
Q Consensus 66 ----~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~---~V~sLafSPD-G~~LaSGS~DGtVrIWDl~tgk~v~~L 133 (792)
.+++..++++..++.+++|+.... .+.+|.. .|.+++|+|+ +++|++++.|+.|++||+.+++.+..+
T Consensus 166 ~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp EEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred EEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 112237899999999999998765 4567988 9999999999 999999999999999999999999999
Q ss_pred -c---CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC-----CCeeEEEEcCCCcEEEEEc-CCeEE
Q 036953 134 -S---GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFY-----RPIASIAFHAEGELLAVAS-GHKLY 203 (792)
Q Consensus 134 -~---gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~-----s~V~sVafSpdG~~LasgS-dd~V~ 203 (792)
. +|...|.+++|+ ++++|++++.|++|++||+++++.+..+... ..+.++.|. +++++++++ ++.|+
T Consensus 246 ~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~ 322 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLN 322 (615)
T ss_dssp CBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEE
T ss_pred cccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEE
Confidence 6 899999999999 7899999999999999999999998888543 678888886 888888888 55599
Q ss_pred EEECCCCCcccCCeEEecCCCCeEEEEE
Q 036953 204 IWPYNNKEEASSPIIVLKTRRSLRAVHF 231 (792)
Q Consensus 204 IWDlrt~~~~~~~~~~~~h~~sVtsVaf 231 (792)
+||+++.+... ....|...|++++|
T Consensus 323 ~~d~~~~~~~~---~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 323 FYELGHDEVLK---TISGHNKGITALTV 347 (615)
T ss_dssp EEETTEEEEEE---EECCCSSCEEEEET
T ss_pred EEECCCCcEEE---EEeCCCCCEEEEEe
Confidence 99998755322 23334455555555
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.87 E-value=4e-21 Score=202.30 Aligned_cols=231 Identities=15% Similarity=0.131 Sum_probs=174.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS 170 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg 170 (792)
.|...|.+++|+|++++|++++.|+.|+|||+.+++ .+..+.+|...|.+++|+| ++++|++++.|++|++||++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCCC
Confidence 478899999999999999999999999999999887 8889999999999999999 9999999999999999999988
Q ss_pred cEEEEe---ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCe-EEecCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 171 ECIGSC---DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPI-IVLKTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 171 ~~v~t~---~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~-~~~~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
+....+ .+...|.+++|+|++++|++++. +.|++||++..+...... ....|...|++++|+|+++.+++++.+.
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 755443 58889999999999999999985 459999998876422111 2244788999999999999888777655
Q ss_pred ccccCCC--------------------ceeeecC---CC---cccCCCCceEEEEecCCCEEEEee-----ccCcccCCC
Q 036953 246 DLDSSDS--------------------SMTRATS---PG---YLRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLP 294 (792)
Q Consensus 246 dLrs~d~--------------------~~~l~t~---sg---~~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~ 294 (792)
.+..++. ...+... .+ ...+.+....++.+..+..+.++. ....+..|.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC
Confidence 5554441 1111111 11 223333433444444444444444 122345677
Q ss_pred ceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccC
Q 036953 295 FLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFP 351 (792)
Q Consensus 295 ~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~ 351 (792)
..|.+++|+|+|++++ ++ .|.+|.-|+...
T Consensus 245 ~~v~~~~~~~~~~~l~--------------------------~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 245 LPLLAVTFITESSLVA--------------------------AG-HDCFPVLFTYDS 274 (372)
T ss_dssp CCEEEEEEEETTEEEE--------------------------EE-TTSSCEEEEEET
T ss_pred CCeEEEEEecCCCEEE--------------------------EE-eCCeEEEEEccC
Confidence 8888999999998887 44 777888888665
No 87
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.87 E-value=1.4e-20 Score=219.78 Aligned_cols=231 Identities=18% Similarity=0.210 Sum_probs=185.7
Q ss_pred CCCCCceEeeecccc--------eeeCCCCceeeeEEeeCCCceEeecCCCceee--c----------------------
Q 036953 20 HLRRRARNVSRLLAH--------REISPKTKYVPKRQWVDASKLKTCGPSDSSVR--D---------------------- 67 (792)
Q Consensus 20 s~~s~~r~V~~l~~~--------rels~~tk~V~s~aWspd~~lla~G~~a~sv~--d---------------------- 67 (792)
....+.+++|+.... +.+..+...+.++.|+++++++++|..+..++ +
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 345677899987542 34456777899999999998877765444322 1
Q ss_pred --CCcEEEEEeCCCeEEEEeccCC-------CcCCCCCCeEEEEEcCCC--CEEEEEECCCeEEEEECCCCcEEEEecCC
Q 036953 68 --AKRGLVSWVEAESLRHLSAKYC-------PLVPPPRSTIAAAFSPDG--RTLASTHGDHTVKIIDCQTGNCLKVLSGH 136 (792)
Q Consensus 68 --~~~~L~S~s~d~sIrvWd~~t~-------~L~gH~~~V~sLafSPDG--~~LaSGS~DGtVrIWDl~tgk~v~~L~gH 136 (792)
.+..+++++.|++|++|+.... ...+|...|.+++|+|++ ..|++++.|++|+|||+.++++...+.+|
T Consensus 481 s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h 560 (694)
T 3dm0_A 481 SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH 560 (694)
T ss_dssp CTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred eCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCC
Confidence 2335788899999999997533 235799999999999976 68999999999999999999999999999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCC
Q 036953 137 RRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSP 216 (792)
Q Consensus 137 ~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~ 216 (792)
.+.|++++|+| ++++|++++.|++|++||+++++.+..+.+...+.+++|+|++.+|++++++.|+|||+++.+.....
T Consensus 561 ~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 561 TGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhh
Confidence 99999999999 99999999999999999999999998888888999999999999999999888999999887643200
Q ss_pred e----------------EEecCCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 217 I----------------IVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 217 ~----------------~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
. ....+...+++++|+|+|++|++++.+..|+.|+
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 640 KVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWG 690 (694)
T ss_dssp CCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEe
Confidence 0 0001122478999999999888877777666554
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=4.5e-21 Score=227.62 Aligned_cols=249 Identities=13% Similarity=0.081 Sum_probs=190.2
Q ss_pred eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcCC--CC
Q 036953 37 ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSPD--GR 108 (792)
Q Consensus 37 ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSPD--G~ 108 (792)
+..+...+.+++|+++++++ ++++.|+.|++|+.... .+.+|.+.|.+++|+++ ++
T Consensus 5 l~gH~~~V~~l~~s~dg~~l----------------atg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~ 68 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRL----------------ATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT 68 (753)
T ss_dssp ---CCCCEEEECCCSSSCCE----------------EEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS
T ss_pred cccCcceeEEEEECCCCCeE----------------EEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC
Confidence 34566788999999886644 44467788888887522 46789999999999987 99
Q ss_pred EEEEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCc---EEEEeccCCC
Q 036953 109 TLASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLR--SEILASGSLDHEVRLWDANTSE---CIGSCDFYRP 181 (792)
Q Consensus 109 ~LaSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~d--g~lLaSgS~DgtVrLWDl~tg~---~v~t~~h~s~ 181 (792)
+|++|+.||.|++||+.+++ .+..+.+|...|++++|+| + ++++++++.|++|++||++++. ......+...
T Consensus 69 ~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 69 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 99999999999999999887 7788889999999999999 7 8999999999999999998873 2333368899
Q ss_pred eeEEEEcC-------------CCcEEEEEc-CCeEEEEECCCCCcccC-CeEEecCCCCeEEEEEccC---CCeEEEEEe
Q 036953 182 IASIAFHA-------------EGELLAVAS-GHKLYIWPYNNKEEASS-PIIVLKTRRSLRAVHFHPH---AAPFVLTAE 243 (792)
Q Consensus 182 V~sVafSp-------------dG~~LasgS-dd~V~IWDlrt~~~~~~-~~~~~~h~~sVtsVafSPd---G~~LlaS~s 243 (792)
|.+++|+| ++++|++++ ++.|++||+++...... ......|...|++++|+|+ ++.+++++.
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 99999999 588899988 55599999987754321 2234568899999999999 776666665
Q ss_pred eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCcc
Q 036953 244 VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQ 323 (792)
Q Consensus 244 ~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~ 323 (792)
+..++ +|+...+..... ........|...|++++|+|+|++++
T Consensus 228 Dg~I~-----------------------iwd~~~~~~~~~-~~~~~~~~~~~~v~~l~~spdg~~l~------------- 270 (753)
T 3jro_A 228 DRTCI-----------------------IWTQDNEQGPWK-KTLLKEEKFPDVLWRASWSLSGNVLA------------- 270 (753)
T ss_dssp SSCEE-----------------------EEEESSSSSCCB-CCBSSSSCCSSCCCCEEECTTTCCEE-------------
T ss_pred CCEEE-----------------------EecCCCCCCcce-eEEeccCCCCCceEEEEEcCCCCEEE-------------
Confidence 54333 333333211000 01122345888999999999999999
Q ss_pred ccccccccccCCCCCccccccccccccCC
Q 036953 324 IEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 324 ~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|++|.-|+...+
T Consensus 271 -------------s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 271 -------------LSGGDNKVTLWKENLE 286 (753)
T ss_dssp -------------EECSSSCEECCBCCSS
T ss_pred -------------EEcCCCEEEEEecCCC
Confidence 6778888888887754
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.87 E-value=2.6e-20 Score=218.30 Aligned_cols=238 Identities=16% Similarity=0.158 Sum_probs=191.5
Q ss_pred CCCceEeeecccceeeC---CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCC
Q 036953 22 RRRARNVSRLLAHREIS---PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPP 94 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels---~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH 94 (792)
..+.+.+|+....+.+. .+...+..+.|+|+++++ ++++.++.|++|+..++ .+.+|
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l----------------~~~~~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWI----------------IVGSDDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEE----------------EEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEE----------------EEEeCCCeEEEEECCCCcEEEEEecC
Confidence 45779999987654433 566788999999987654 44467888999998765 35689
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC-cEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 036953 95 PRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTG-NCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tg-k~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
...|.+++|+|++++|++++.|+.|++||+.++ .....+.+|...|.+++|+|.+++++++++.|++|++||+.+++..
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 999999999999999999999999999999887 6778888999999999999967789999999999999999988766
Q ss_pred EEec--cCCCeeEEEEcC--CCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccc
Q 036953 174 GSCD--FYRPIASIAFHA--EGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLD 248 (792)
Q Consensus 174 ~t~~--h~s~V~sVafSp--dG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLr 248 (792)
..+. +...+..++|+| ++.+|++++. +.|++||+++++.. .....|...|++++|+|+++.+++++.+..
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-- 251 (814)
T 3mkq_A 177 FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV---ATLEGHMSNVSFAVFHPTLPIIISGSEDGT-- 251 (814)
T ss_dssp EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE---EEEECCSSCEEEEEECSSSSEEEEEETTSC--
T ss_pred eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE---EEEcCCCCCEEEEEEcCCCCEEEEEeCCCe--
Confidence 6653 448899999999 9999999984 55999999887643 345568899999999999997776664443
Q ss_pred cCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCc
Q 036953 249 SSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSR 307 (792)
Q Consensus 249 s~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr 307 (792)
+.+|...++...... ..|...++.++++|+|+
T Consensus 252 ---------------------v~vwd~~~~~~~~~~------~~~~~~v~~~~~~~~~~ 283 (814)
T 3mkq_A 252 ---------------------LKIWNSSTYKVEKTL------NVGLERSWCIATHPTGR 283 (814)
T ss_dssp ---------------------EEEEETTTCSEEEEE------CCSSSSEEEEEECTTCG
T ss_pred ---------------------EEEEECCCCcEEEEe------ecCCCcEEEEEEccCCC
Confidence 444554454443333 23677899999999997
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=2.3e-20 Score=199.63 Aligned_cols=202 Identities=13% Similarity=0.130 Sum_probs=161.7
Q ss_pred CcCCCCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEec--CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEE
Q 036953 90 PLVPPPRSTIAAAFSPDG-RTLASTHGDHTVKIIDCQTGNCLKVLS--GHRRTPWVVRFHPLRSEILASGSLDHEVRLWD 166 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG-~~LaSGS~DGtVrIWDl~tgk~v~~L~--gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWD 166 (792)
.+.+|...|++++|+|++ ++|++|+.|+.|+|||+.+++....+. +|...|.+++|+|+++++|++++.|++|++||
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 346899999999999998 999999999999999999888777765 69999999999996679999999999999999
Q ss_pred CCCCcEEEEe-c---cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 167 ANTSECIGSC-D---FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 167 l~tg~~v~t~-~---h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
+++. .+..+ . +...|.+++|+|++++|++++ ++.|++||++ .+. ......|...|++++|+|+++.++++
T Consensus 148 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~---~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 148 FSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHE---IFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp TTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCE---EEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred CCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCE---EEEeccCCCcEEEEEECCCCCCEEEE
Confidence 9964 44444 2 347899999999999999999 4559999994 332 23456789999999999999944444
Q ss_pred E-eeCccccCCCceeeecCCCcccCCCCceEEEEecC----CCEEEEeeccCcccCCCceEEEeEECC-CCcEEEEcccc
Q 036953 242 A-EVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQS----GDHVSLAAELPLMSSLPFLIVPSVSID-DSRIDLQHASR 315 (792)
Q Consensus 242 ~-s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ss----G~~~~l~s~l~~l~gh~~~VwdV~~Sp-DGr~lv~~~~~ 315 (792)
+ .+..++ +|+... +...... +|...|.+++|+| +|++|+
T Consensus 223 ~~~d~~i~-----------------------iwd~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~~l~----- 267 (383)
T 3ei3_B 223 SSVDATVK-----------------------LWDLRNIKDKNSYIAEM-------PHEKPVNAAYFNPTDSTKLL----- 267 (383)
T ss_dssp EETTSEEE-----------------------EEEGGGCCSTTCEEEEE-------ECSSCEEEEEECTTTSCEEE-----
T ss_pred EeCCCEEE-----------------------EEeCCCCCcccceEEEe-------cCCCceEEEEEcCCCCCEEE-----
Confidence 4 343333 333333 3333333 2788999999999 999999
Q ss_pred ccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 316 RASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 316 ~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|.+|.-||...+
T Consensus 268 ---------------------~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 268 ---------------------TTDQRNEIRVYSSYDW 283 (383)
T ss_dssp ---------------------EEESSSEEEEEETTBT
T ss_pred ---------------------EEcCCCcEEEEECCCC
Confidence 7888999999997655
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=2.1e-21 Score=210.39 Aligned_cols=253 Identities=11% Similarity=0.061 Sum_probs=181.9
Q ss_pred ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC--------------CcCCCCCCeEEEEEcCCC
Q 036953 42 KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC--------------PLVPPPRSTIAAAFSPDG 107 (792)
Q Consensus 42 k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~--------------~L~gH~~~V~sLafSPDG 107 (792)
..+.+++|+|+++++++|.....- . +-++.|++|+.... .+.+|.+.|.+++++ +
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~-s--------Gi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~ 83 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGN-N--------GIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--K 83 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSS-S--------SCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--T
T ss_pred CCEEEEEEeCCCcEEEEECCCccc-c--------CCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--C
Confidence 358999999999988876321110 0 12345677765422 356888899888775 5
Q ss_pred CEEEEEE-----------CCCeEEEEECCCCcEE----EEe-----cCCCCCcEEEEEccCCCCEEEEE--eCCCeEEEE
Q 036953 108 RTLASTH-----------GDHTVKIIDCQTGNCL----KVL-----SGHRRTPWVVRFHPLRSEILASG--SLDHEVRLW 165 (792)
Q Consensus 108 ~~LaSGS-----------~DGtVrIWDl~tgk~v----~~L-----~gH~~~VtsVafSP~dg~lLaSg--S~DgtVrLW 165 (792)
+.+++|. .|+.+++|++...+.. ... ..+...+.+++|+| |+++++++ +.|++|++|
T Consensus 84 ~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iw 162 (365)
T 4h5i_A 84 GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRII 162 (365)
T ss_dssp TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEE
T ss_pred CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEe
Confidence 6676654 4778999998665322 111 13456789999999 88887654 478999999
Q ss_pred ECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 166 DANTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 166 Dl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
|+++++++..+.+...|.+++|+|+|++|++++++++.+|+..+++... ......|...|++++|+|+++.+++++.+.
T Consensus 163 d~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 163 DPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIA-RKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp ETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEE-EECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred ECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCccee-eeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 9999999999999999999999999999999998889999988776432 112344778899999999999877766543
Q ss_pred ccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCcccc
Q 036953 246 DLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIE 325 (792)
Q Consensus 246 dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~ 325 (792)
.... .+..|....+...... ...+.+|...|.+++|+|||++|+
T Consensus 242 ~~~~-------------------~i~~~~~~~~~~~~~~--~~~~~~~~~~V~~~~~Spdg~~la--------------- 285 (365)
T 4h5i_A 242 GKGI-------------------VLTKISIKSGNTSVLR--SKQVTNRFKGITSMDVDMKGELAV--------------- 285 (365)
T ss_dssp SCCE-------------------EEEEEEEETTEEEEEE--EEEEESSCSCEEEEEECTTSCEEE---------------
T ss_pred ccee-------------------EEeecccccceeccee--eeeecCCCCCeEeEEECCCCCceE---------------
Confidence 2110 1233333333221111 122445889999999999999999
Q ss_pred ccccccccCCCCCccccccccccccCCCC
Q 036953 326 PSASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 326 ~s~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
+|+.|++|.-||+..+++
T Consensus 286 -----------sgs~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 286 -----------LASNDNSIALVKLKDLSM 303 (365)
T ss_dssp -----------EEETTSCEEEEETTTTEE
T ss_pred -----------EEcCCCEEEEEECCCCcE
Confidence 899999999999877643
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.8e-21 Score=209.44 Aligned_cols=266 Identities=11% Similarity=0.090 Sum_probs=177.6
Q ss_pred CCCceEeeeccc---ceee----C-CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEecc---CC-
Q 036953 22 RRRARNVSRLLA---HREI----S-PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAK---YC- 89 (792)
Q Consensus 22 ~s~~r~V~~l~~---~rel----s-~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~---t~- 89 (792)
..+.+++|+... .... . .+...+.+++|++++.++ ++++.|+.|++|+.. .+
T Consensus 84 ~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l----------------~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 84 DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAF----------------AVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEE----------------EEEETTSEEEEEEEEEEEETT
T ss_pred CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEE----------------EEEeCCCEEEEEEeccccCCc
Confidence 556788998755 2111 1 245567888888776644 444566666666653 11
Q ss_pred -------------CcCC--CCCCeEEEE--EcCCCCEEEEEECCCeEEEEECCCCcEEEEecC--CCCCcEEEEEccCCC
Q 036953 90 -------------PLVP--PPRSTIAAA--FSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG--HRRTPWVVRFHPLRS 150 (792)
Q Consensus 90 -------------~L~g--H~~~V~sLa--fSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g--H~~~VtsVafSP~dg 150 (792)
.+.. +...+.++. +++++++|++++.|+.|++||+.+++++..+.+ |.+.|++++|+| ++
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~ 226 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-EC 226 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TS
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CC
Confidence 1112 667788888 668999999999999999999999999999998 899999999999 89
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe--ccCCCeeEEEEc----CCCcEEEEEcCCe-EEEEECCCCCcccCCe------
Q 036953 151 EILASGSLDHEVRLWDANTSECIGSC--DFYRPIASIAFH----AEGELLAVASGHK-LYIWPYNNKEEASSPI------ 217 (792)
Q Consensus 151 ~lLaSgS~DgtVrLWDl~tg~~v~t~--~h~s~V~sVafS----pdG~~LasgSdd~-V~IWDlrt~~~~~~~~------ 217 (792)
++|++++.|++|++||+++++++..+ .+...|.+++|+ +++++|++++.++ |++||+++++......
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 306 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQP 306 (437)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCC
T ss_pred CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCC
Confidence 99999999999999999999999887 567789999665 4678999998655 9999998876432000
Q ss_pred ---------------EEe--cCCCCeEEEEEccCCCeEEEEEeeCccccCCC-----ceeeecCCCcccCCCCceEEEEe
Q 036953 218 ---------------IVL--KTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDS-----SMTRATSPGYLRYPPPAVFVANA 275 (792)
Q Consensus 218 ---------------~~~--~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~-----~~~l~t~sg~~~~p~~~~~l~~~ 275 (792)
... .|...|++++|+ +++.|++++.+..|+.|+. ...+..... .. ..+....
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~---~~--~~~~~~~ 380 (437)
T 3gre_A 307 SMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR---FS--DVFIPTQ 380 (437)
T ss_dssp CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-----CC--CEEEEEE
T ss_pred ccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc---cC--ceEEEEE
Confidence 001 156679999999 6776666655555554443 222322111 10 1111111
Q ss_pred cCCCEEEEe--------eccCcccCCCceEEEeEECCC--CcEEE
Q 036953 276 QSGDHVSLA--------AELPLMSSLPFLIVPSVSIDD--SRIDL 310 (792)
Q Consensus 276 ssG~~~~l~--------s~l~~l~gh~~~VwdV~~SpD--Gr~lv 310 (792)
.+.....+. ........|...|.+++++++ +.+|+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~ 425 (437)
T 3gre_A 381 VTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLV 425 (437)
T ss_dssp EETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEE
T ss_pred eecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEE
Confidence 111111111 011234459999999999998 77888
No 93
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=4.5e-20 Score=201.93 Aligned_cols=227 Identities=19% Similarity=0.322 Sum_probs=186.3
Q ss_pred CCceEeeecccceeeC-----CCCceeeeEEeeCCCceEeecCCCceeecC------------------------CcEEE
Q 036953 23 RRARNVSRLLAHREIS-----PKTKYVPKRQWVDASKLKTCGPSDSSVRDA------------------------KRGLV 73 (792)
Q Consensus 23 s~~r~V~~l~~~rels-----~~tk~V~s~aWspd~~lla~G~~a~sv~d~------------------------~~~L~ 73 (792)
.+.+++|+....+... .+...|++++|+|+++++++|..+..+..+ +..++
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~ 203 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 203 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEE
Confidence 4568899987664332 345579999999999998887655443221 23466
Q ss_pred EEeCCCeEEEEeccCC-----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc----EEEEecCCCCCcEEEE
Q 036953 74 SWVEAESLRHLSAKYC-----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN----CLKVLSGHRRTPWVVR 144 (792)
Q Consensus 74 S~s~d~sIrvWd~~t~-----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk----~v~~L~gH~~~VtsVa 144 (792)
+++.++.+++|+.... .+.+|...+..+.|+|+++++++++.|+.|+|||..+++ .+..+..|...|.+++
T Consensus 204 sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~ 283 (420)
T 4gga_A 204 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 283 (420)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEE
T ss_pred EEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeee
Confidence 7888999999998754 467899999999999999999999999999999998765 3567778999999999
Q ss_pred EccCCCCEEEEE--eCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEE
Q 036953 145 FHPLRSEILASG--SLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIV 219 (792)
Q Consensus 145 fSP~dg~lLaSg--S~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~ 219 (792)
|+|.+..+++++ +.|++|++||+++++++..+.....+.++.|+++++.|++++ ++.|+|||+.+.+... .+
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~---~l 360 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---EL 360 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EE
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE---EE
Confidence 999777787765 479999999999999999999889999999999999888764 4559999999887543 55
Q ss_pred ecCCCCeEEEEEccCCCeEEEEEeeCccccCCC
Q 036953 220 LKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDS 252 (792)
Q Consensus 220 ~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~ 252 (792)
.+|...|++++|+|+|++|++++.+..|+.|+.
T Consensus 361 ~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 361 KGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 679999999999999998888887776776653
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=1.9e-20 Score=205.55 Aligned_cols=252 Identities=13% Similarity=0.176 Sum_probs=185.8
Q ss_pred CCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEE
Q 036953 68 AKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVV 143 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsV 143 (792)
.+..+++++.|++|++|+..++ .+.+|...|.+++|++++ .|++|+.||+|++||+.+++++..+.+|...|.++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 3458899999999999998876 467899999999999988 99999999999999999999999999999999999
Q ss_pred EEcc-CCCCEEEEEeCCCeEEEEECCCCcEE-----------------------EEe-ccCCCeeEEEEcCCCcEEEEEc
Q 036953 144 RFHP-LRSEILASGSLDHEVRLWDANTSECI-----------------------GSC-DFYRPIASIAFHAEGELLAVAS 198 (792)
Q Consensus 144 afSP-~dg~lLaSgS~DgtVrLWDl~tg~~v-----------------------~t~-~h~s~V~sVafSpdG~~LasgS 198 (792)
+|++ .+++++++++.|++|++||+++++.. ..+ .|...+.++ ++++++|++++
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~ 287 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGS 287 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEE
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEe
Confidence 9985 26789999999999999999986532 222 466677666 57889999998
Q ss_pred -CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----eeeecCCC---cccCCCCc
Q 036953 199 -GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTRATSPG---YLRYPPPA 269 (792)
Q Consensus 199 -dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l~t~sg---~~~~p~~~ 269 (792)
++.|++||+++.+... ....|...|++++|+|+++.+++++.+..++.++.. ..+..... ...+. +
T Consensus 288 ~d~~i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~- 362 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLY---ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-D- 362 (464)
T ss_dssp TTSCEEEEETTTTEEEE---EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-S-
T ss_pred CCCeEEEEECCCCcEEE---EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc-C-
Confidence 5559999998876432 455688999999999999988888776666555432 22222211 11122 1
Q ss_pred eEEEEecCCCEEEEeecc---Ccc-cCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccc
Q 036953 270 VFVANAQSGDHVSLAAEL---PLM-SSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVP 345 (792)
Q Consensus 270 ~~l~~~ssG~~~~l~s~l---~~l-~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~ 345 (792)
..++.+..+..+.++.-. ... ..+...+..++++++|++++ +++ |.+|.
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------------------------~~~-dg~i~ 415 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV--------------------------SGS-ENQFN 415 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEE--------------------------EEE-TTEEE
T ss_pred CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEE--------------------------Eec-CCeEE
Confidence 233333334444444311 011 12455666778888888888 555 88889
Q ss_pred cccccCCCC
Q 036953 346 SMETFPVIP 354 (792)
Q Consensus 346 p~~~~~~~p 354 (792)
-||...+++
T Consensus 416 iwd~~~g~~ 424 (464)
T 3v7d_B 416 IYNLRSGKL 424 (464)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999877743
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=8.4e-21 Score=230.58 Aligned_cols=203 Identities=9% Similarity=0.008 Sum_probs=154.8
Q ss_pred CCceeeeEEeeCCCceEeecCCCceeecC------------------------CcEEEEEeCCCeEEEEeccCCCc---C
Q 036953 40 KTKYVPKRQWVDASKLKTCGPSDSSVRDA------------------------KRGLVSWVEAESLRHLSAKYCPL---V 92 (792)
Q Consensus 40 ~tk~V~s~aWspd~~lla~G~~a~sv~d~------------------------~~~L~S~s~d~sIrvWd~~t~~L---~ 92 (792)
+...+.+++|+|+++++++|..+..++.+ +..|++++.|++|++||..+++. .
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 34567777777777776666543332110 22478888999999999986632 2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE-----------EEecCCCCCcEEEEEccCCCCEEEEEeCCCe
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL-----------KVLSGHRRTPWVVRFHPLRSEILASGSLDHE 161 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v-----------~~L~gH~~~VtsVafSP~dg~lLaSgS~Dgt 161 (792)
.|...|++++|+|++++|++|+.||+|++||+.+++.. ..+.+|.+.|++++|+|.+..++++++.|++
T Consensus 96 ~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~ 175 (902)
T 2oaj_A 96 FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVT 175 (902)
T ss_dssp ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCE
T ss_pred cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCc
Confidence 36788999999999999999999999999999988753 2346799999999999955679999999999
Q ss_pred EEEEECCCCcEEEEecc-------------------CCCeeEEEEcCCCcEEEEEcCC-eEEEEECCCCCcccCCeEE--
Q 036953 162 VRLWDANTSECIGSCDF-------------------YRPIASIAFHAEGELLAVASGH-KLYIWPYNNKEEASSPIIV-- 219 (792)
Q Consensus 162 VrLWDl~tg~~v~t~~h-------------------~s~V~sVafSpdG~~LasgSdd-~V~IWDlrt~~~~~~~~~~-- 219 (792)
| +||+++++++..+.. ...|.+++|+|+|++|++++.+ .|++||+++++.... ...
T Consensus 176 v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~-r~l~~ 253 (902)
T 2oaj_A 176 L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA-RTVFE 253 (902)
T ss_dssp E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE-ECSSC
T ss_pred E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE-Eeecc
Confidence 9 999999998887753 3679999999999999999954 599999988764320 000
Q ss_pred -e-------------cCCCCeEEEEEcc----CCCeEEEEEee
Q 036953 220 -L-------------KTRRSLRAVHFHP----HAAPFVLTAEV 244 (792)
Q Consensus 220 -~-------------~h~~sVtsVafSP----dG~~LlaS~s~ 244 (792)
. .+...|++++|++ ++..++++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 254 TEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp SCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred cccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCC
Confidence 0 1345799999964 44467777653
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.87 E-value=7.1e-21 Score=199.01 Aligned_cols=214 Identities=17% Similarity=0.230 Sum_probs=169.2
Q ss_pred CCceEeeecccceeeCC--------CCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----
Q 036953 23 RRARNVSRLLAHREISP--------KTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP---- 90 (792)
Q Consensus 23 s~~r~V~~l~~~rels~--------~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~---- 90 (792)
.+.+.+|+....+.+.. ....+..++|+++.. ..+..++++..++.|++|+..+++
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 110 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSN------------TSHPLLAVAGSRGIIRIINPITMQCIKH 110 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTT------------TCCEEEEEEETTCEEEEECTTTCCEEEE
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCC------------CCCCEEEEecCCCEEEEEEchhceEeee
Confidence 44688998875544321 234577888887742 124467778899999999987663
Q ss_pred cCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEEe---cCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEE
Q 036953 91 LVPPPRSTIAAAFSP-DGRTLASTHGDHTVKIIDCQTGNCLKVL---SGHRRTPWVVRFHPLRSEILASGSLDHEVRLWD 166 (792)
Q Consensus 91 L~gH~~~V~sLafSP-DG~~LaSGS~DGtVrIWDl~tgk~v~~L---~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWD 166 (792)
+.+|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+ .+|...|.+++|+| ++++|++++.|+.|++||
T Consensus 111 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d 189 (366)
T 3k26_A 111 YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWR 189 (366)
T ss_dssp EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEE
Confidence 568999999999999 9999999999999999999999999888 78999999999999 999999999999999999
Q ss_pred CCCCcEEEEec-----------------------------cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcc---
Q 036953 167 ANTSECIGSCD-----------------------------FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEA--- 213 (792)
Q Consensus 167 l~tg~~v~t~~-----------------------------h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~--- 213 (792)
+++++.+..+. +...|.+++|+ +++|++++ ++.|++||+++.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~ 267 (366)
T 3k26_A 190 INSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDK 267 (366)
T ss_dssp SCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGG
T ss_pred CCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccc
Confidence 99875443322 88899999998 77888888 556999999876531
Q ss_pred --------cCCeEEecCCCCeEEEEEccC--CCeEEEEEeeCccccCC
Q 036953 214 --------SSPIIVLKTRRSLRAVHFHPH--AAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 214 --------~~~~~~~~h~~sVtsVafSPd--G~~LlaS~s~~dLrs~d 251 (792)
........|...|++++|+|+ ++.|++++.+..|..|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 268 IKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp CCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEE
T ss_pred cccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEE
Confidence 002234457888999999999 99777776655555443
No 97
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=9.1e-21 Score=201.53 Aligned_cols=178 Identities=12% Similarity=0.020 Sum_probs=138.1
Q ss_pred EEEEeCCCeEEEEec---------cCCC-----cCCCCCCeEEEEEcC--CCCEEEEEECCCeEEEEECCCCcEEEEec-
Q 036953 72 LVSWVEAESLRHLSA---------KYCP-----LVPPPRSTIAAAFSP--DGRTLASTHGDHTVKIIDCQTGNCLKVLS- 134 (792)
Q Consensus 72 L~S~s~d~sIrvWd~---------~t~~-----L~gH~~~V~sLafSP--DG~~LaSGS~DGtVrIWDl~tgk~v~~L~- 134 (792)
+++++.|+++++|+. .+.+ ..+|.+.|.+++|+| ++++|++++.|++|++||+.+++++..+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 555566666666644 3443 136668899999999 99999999999999999999999877764
Q ss_pred CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE-EEe-c-cCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCC
Q 036953 135 GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI-GSC-D-FYRPIASIAFHAEGELLAVASGHKLYIWPYNNKE 211 (792)
Q Consensus 135 gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v-~t~-~-h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~ 211 (792)
.|...|++++|+| ++.+|++|+.|++|++||+++++.+ ..+ . |...|.+++|+|++.+|++++++.|++||+++.+
T Consensus 168 ~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 168 KSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 4566899999999 9999999999999999999999877 555 3 7899999999999999999998889999999887
Q ss_pred cccCCeEEecCCCCe--EEEEEccCCCeEEEEEe-eCccccC
Q 036953 212 EASSPIIVLKTRRSL--RAVHFHPHAAPFVLTAE-VNDLDSS 250 (792)
Q Consensus 212 ~~~~~~~~~~h~~sV--tsVafSPdG~~LlaS~s-~~dLrs~ 250 (792)
..........+...+ .+++|+|+++++++++. +..++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 247 GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEE
Confidence 543111111122223 46999999998888766 5555544
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-19 Score=185.12 Aligned_cols=235 Identities=11% Similarity=0.103 Sum_probs=180.9
Q ss_pred eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEE
Q 036953 35 REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTL 110 (792)
Q Consensus 35 rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~L 110 (792)
+.+..+...+.+++| +++. .+++++.|+.|++|+.... .+..|...|.+++|+|++++|
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~----------------~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 74 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDS----------------KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELL 74 (313)
T ss_dssp EEECCCSSCEEEEEE-EETT----------------EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred HHhhCCCCCcEEEEe-cCCC----------------EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEE
Confidence 344566677888877 5544 3556678888999988755 345789999999999999999
Q ss_pred EEEECCCeEEEEECCCC---cEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEE
Q 036953 111 ASTHGDHTVKIIDCQTG---NCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIA 186 (792)
Q Consensus 111 aSGS~DGtVrIWDl~tg---k~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVa 186 (792)
++++.|+.|++|++... +.+..+.+|...|.++.|+ ++++++++.|++|++|| .++.+..+ .+...+.+++
T Consensus 75 ~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~ 149 (313)
T 3odt_A 75 LFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAK 149 (313)
T ss_dssp EEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEE
T ss_pred EEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEE
Confidence 99999999999998654 5677888999999999994 47999999999999999 55666666 5889999999
Q ss_pred EcC-CCcEEEEEcC-CeEEEEECCCCCcccCCeEEec-CCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcc
Q 036953 187 FHA-EGELLAVASG-HKLYIWPYNNKEEASSPIIVLK-TRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYL 263 (792)
Q Consensus 187 fSp-dG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~-h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~ 263 (792)
|++ ++++|++++. +.|++||..... ..... +...|.+++|+|++. +++++.+.
T Consensus 150 ~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg------------------ 205 (313)
T 3odt_A 150 VVSFSENKFLTASADKTIKLWQNDKVI-----KTFSGIHNDVVRHLAVVDDGH-FISCSNDG------------------ 205 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTEEE-----EEECSSCSSCEEEEEEEETTE-EEEEETTS------------------
T ss_pred EccCCCCEEEEEECCCCEEEEecCceE-----EEEeccCcccEEEEEEcCCCe-EEEccCCC------------------
Confidence 998 8899999884 559999933221 22333 788999999999998 66655443
Q ss_pred cCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccc
Q 036953 264 RYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGT 343 (792)
Q Consensus 264 ~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~t 343 (792)
.+.+|+..++..+... .+|...|.+++|+|+|+ ++ +++.|++
T Consensus 206 -----~i~i~d~~~~~~~~~~------~~~~~~i~~~~~~~~~~-l~--------------------------~~~~dg~ 247 (313)
T 3odt_A 206 -----LIKLVDMHTGDVLRTY------EGHESFVYCIKLLPNGD-IV--------------------------SCGEDRT 247 (313)
T ss_dssp -----EEEEEETTTCCEEEEE------ECCSSCEEEEEECTTSC-EE--------------------------EEETTSE
T ss_pred -----eEEEEECCchhhhhhh------hcCCceEEEEEEecCCC-EE--------------------------EEecCCE
Confidence 2444554455443333 34889999999999996 44 4778999
Q ss_pred cccccccCCC
Q 036953 344 VPSMETFPVI 353 (792)
Q Consensus 344 v~p~~~~~~~ 353 (792)
|.-||...++
T Consensus 248 v~iwd~~~~~ 257 (313)
T 3odt_A 248 VRIWSKENGS 257 (313)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCc
Confidence 9999976664
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.85 E-value=6.3e-20 Score=198.84 Aligned_cols=214 Identities=13% Similarity=0.095 Sum_probs=147.0
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC-CcEEEE-------ecCCCCCcEEEEEccCCC-CEEEEEeCCCe
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQT-GNCLKV-------LSGHRRTPWVVRFHPLRS-EILASGSLDHE 161 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~t-gk~v~~-------L~gH~~~VtsVafSP~dg-~lLaSgS~Dgt 161 (792)
+.+|...|.+++|+|++++|++| .|+.|+|||+.+ ++.+.. +.+|...|++++|+| ++ ++|++++.|++
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGT 250 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSC
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCe
Confidence 36899999999999999999998 899999999984 444442 568999999999999 66 99999999999
Q ss_pred EEEEECCCCcE----EEEec-cCC------------CeeEEEEcCCCcEEEEEcCCeEEEEECCC-CCcccCCeEEecCC
Q 036953 162 VRLWDANTSEC----IGSCD-FYR------------PIASIAFHAEGELLAVASGHKLYIWPYNN-KEEASSPIIVLKTR 223 (792)
Q Consensus 162 VrLWDl~tg~~----v~t~~-h~s------------~V~sVafSpdG~~LasgSdd~V~IWDlrt-~~~~~~~~~~~~h~ 223 (792)
|++||+++++. +..+. +.. .|.+++|+|++++|++++++.|++||++. .+... ....|.
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~---~~~~~~ 327 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVE---TYQVHE 327 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSC---CEESCG
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccc---eeeccc
Confidence 99999999876 56664 443 89999999999999999996699999987 44332 222332
Q ss_pred C---------------CeEEEEEccCCCeEEEEEeeCccccCCCc----eeeecCCCccc--CCCCceEEEEecC--CCE
Q 036953 224 R---------------SLRAVHFHPHAAPFVLTAEVNDLDSSDSS----MTRATSPGYLR--YPPPAVFVANAQS--GDH 280 (792)
Q Consensus 224 ~---------------sVtsVafSPdG~~LlaS~s~~dLrs~d~~----~~l~t~sg~~~--~p~~~~~l~~~ss--G~~ 280 (792)
. .+..++|+|++++|++++.+..|+.|+.. ..+........ .......+..... ...
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDE 407 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTC
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccc
Confidence 1 13459999999988776665555544432 12221111000 0000011111000 000
Q ss_pred EEEeeccCcccCCCceEEEeEECCCCcEEEEccc
Q 036953 281 VSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHAS 314 (792)
Q Consensus 281 ~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~ 314 (792)
... . .-++...|+.++|+|+|.+|++...
T Consensus 408 ~~~----~-~~~~~~~i~~~~~~p~~~~la~~~~ 436 (447)
T 3dw8_B 408 ISV----D-SLDFNKKILHTAWHPKENIIAVATT 436 (447)
T ss_dssp EEG----G-GCCTTSCCCEEEECSSSSEEEEECS
T ss_pred ccc----c-ccccCCceeEEEECCCCCEEEEEec
Confidence 111 1 1136778999999999999985544
No 100
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.85 E-value=7.5e-20 Score=190.94 Aligned_cols=231 Identities=14% Similarity=0.110 Sum_probs=170.1
Q ss_pred CcCCCCCCeEEEEEcCC---CCEEEEEECCCeEEEEECCC-CcEE-EEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEE
Q 036953 90 PLVPPPRSTIAAAFSPD---GRTLASTHGDHTVKIIDCQT-GNCL-KVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRL 164 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPD---G~~LaSGS~DGtVrIWDl~t-gk~v-~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrL 164 (792)
.+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.+ ++.+ ..+.+|...|++++|+| ++++|++++.|++|++
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKM 112 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEE
Confidence 46789999999999998 69999999999999999987 5544 78889999999999999 9999999999999999
Q ss_pred EECCCCcEEEEeccCCCeeEEEE--cCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 165 WDANTSECIGSCDFYRPIASIAF--HAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 165 WDl~tg~~v~t~~h~s~V~sVaf--SpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
||+++++.+....|...|.+++| ++++++|++++ ++.|++||+++.+... .......+.++.+.+ ..++++
T Consensus 113 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~ 186 (368)
T 3mmy_A 113 WDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM----VLQLPERCYCADVIY--PMAVVA 186 (368)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE----EEECSSCEEEEEEET--TEEEEE
T ss_pred EEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE----EEecCCCceEEEecC--CeeEEE
Confidence 99999999888889999999999 89999999988 5569999999887432 334445677777764 456666
Q ss_pred EeeCccccCCCc-----eeeec-CCC----cccC----CCCceEEEEecCCCEEEEeec--------cCcccCCCc----
Q 036953 242 AEVNDLDSSDSS-----MTRAT-SPG----YLRY----PPPAVFVANAQSGDHVSLAAE--------LPLMSSLPF---- 295 (792)
Q Consensus 242 ~s~~dLrs~d~~-----~~l~t-~sg----~~~~----p~~~~~l~~~ssG~~~~l~s~--------l~~l~gh~~---- 295 (792)
+.+..+..++.. ..... ... ...+ ......++....+..+.++.- ...+.+|..
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 664444433321 11100 000 0000 001111444444455444431 123344554
Q ss_pred --------eEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 296 --------LIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 296 --------~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
.|.+++|+|+|++|+ +++.|.+|.-||+..++
T Consensus 267 ~~~~~~~~~v~~~~~sp~~~~l~--------------------------s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPVHGTLA--------------------------TVGSDGRFSFWDKDART 306 (368)
T ss_dssp -CCCEEECCEEEEEECTTTCCEE--------------------------EEETTSCEEEEETTTTE
T ss_pred ccccccccceEEEEEecCCCEEE--------------------------EEccCCeEEEEECCCCc
Confidence 799999999999999 78889999999976653
No 101
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.85 E-value=5.8e-19 Score=193.72 Aligned_cols=262 Identities=13% Similarity=0.114 Sum_probs=191.5
Q ss_pred CCCCceEeeecccceeeC---CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----CcCC
Q 036953 21 LRRRARNVSRLLAHREIS---PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----PLVP 93 (792)
Q Consensus 21 ~~s~~r~V~~l~~~rels---~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~L~g 93 (792)
...+.+++|+....+.+. .+...+..+.|++++ .+++++.|++|++|+..++ .+.+
T Consensus 139 s~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-----------------~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 139 ADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-----------------ILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-----------------EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred cCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-----------------EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 355678888876655443 455567777776543 5677788999999998866 4678
Q ss_pred CCCCeEEEEEc--CCCCEEEEEECCCeEEEEECCCCc-----------------------EEEEecCCCCCcEEEEEccC
Q 036953 94 PPRSTIAAAFS--PDGRTLASTHGDHTVKIIDCQTGN-----------------------CLKVLSGHRRTPWVVRFHPL 148 (792)
Q Consensus 94 H~~~V~sLafS--PDG~~LaSGS~DGtVrIWDl~tgk-----------------------~v~~L~gH~~~VtsVafSP~ 148 (792)
|...|.+++|+ +++++|++|+.|++|++||+.+++ .+..+.+|...|.++. +
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~- 278 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G- 278 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-
Confidence 99999999999 478999999999999999998765 2556788999998874 4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 149 RSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 149 dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
+++++++++.|++|++||+++++++..+. |...|.+++|+|++++|++++. +.|++||+++++... ....|...|
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~---~~~~h~~~v 355 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY---TLQGHTALV 355 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE---EECCCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE---EEeCCCCcE
Confidence 67899999999999999999999998884 8899999999999999999985 459999999887533 456789999
Q ss_pred EEEEEccCCCeEEEEEeeCccccCCCc-----eeeecCC--CcccCCCCceEEEEecCCCEEEEee---cc---CcccCC
Q 036953 227 RAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTRATSP--GYLRYPPPAVFVANAQSGDHVSLAA---EL---PLMSSL 293 (792)
Q Consensus 227 tsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l~t~s--g~~~~p~~~~~l~~~ssG~~~~l~s---~l---~~l~gh 293 (792)
.+++|+ ++.+++++.+..++.|+.. ....... ....+.+....++.+.+ ..+.++. +. ..+..|
T Consensus 356 ~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d-g~i~iwd~~~g~~~~~~~~~~ 432 (464)
T 3v7d_B 356 GLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSE-NQFNIYNLRSGKLVHANILKD 432 (464)
T ss_dssp EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEET-TEEEEEETTTCCEEESCTTTT
T ss_pred EEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecC-CeEEEEECCCCcEEehhhccC
Confidence 999997 4667776665555544332 2222111 12223333344444443 3444444 11 124568
Q ss_pred CceEEEeEECCCCcEEE
Q 036953 294 PFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 294 ~~~VwdV~~SpDGr~lv 310 (792)
...|++++|+ ++.++
T Consensus 433 ~~~v~~v~~~--~~~l~ 447 (464)
T 3v7d_B 433 ADQIWSVNFK--GKTLV 447 (464)
T ss_dssp CSEEEEEEEE--TTEEE
T ss_pred CCcEEEEEec--CCEEE
Confidence 9999999997 55555
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.85 E-value=7.7e-20 Score=194.99 Aligned_cols=207 Identities=18% Similarity=0.193 Sum_probs=164.4
Q ss_pred CCCceEeeeccccee--------eCCC-----CceeeeEEee----CCCceEeecCCCceeecCCcEEEEEeCCCeEEEE
Q 036953 22 RRRARNVSRLLAHRE--------ISPK-----TKYVPKRQWV----DASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHL 84 (792)
Q Consensus 22 ~s~~r~V~~l~~~re--------ls~~-----tk~V~s~aWs----pd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvW 84 (792)
..+.+.+|+....+. +..+ ...+..+.|+ +++.. .++++..++.|++|
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------------~l~~~~~dg~i~iw 153 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH---------------RLVATDVKGTTYIW 153 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE---------------EEEEEETTSCEEEE
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCce---------------EEEEEeCCCcEEEE
Confidence 456788898765442 2333 3667788887 66543 15556677888888
Q ss_pred eccC------CC---------c-------CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC---C---
Q 036953 85 SAKY------CP---------L-------VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG---H--- 136 (792)
Q Consensus 85 d~~t------~~---------L-------~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g---H--- 136 (792)
+... .. + ..|...|.+++|+|++ .|++++.|+.|++||+.+++.+..+.. |
T Consensus 154 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~ 232 (397)
T 1sq9_A 154 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINN 232 (397)
T ss_dssp EEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CC
T ss_pred eCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccccccc
Confidence 8766 32 2 3478899999999999 999999999999999999999999998 9
Q ss_pred CCCcEEEEEccCCCCEEEEEeCC---CeEEEEECCCCcEEEEec--------------cCCCeeEEEEcCCCcEEEEEc-
Q 036953 137 RRTPWVVRFHPLRSEILASGSLD---HEVRLWDANTSECIGSCD--------------FYRPIASIAFHAEGELLAVAS- 198 (792)
Q Consensus 137 ~~~VtsVafSP~dg~lLaSgS~D---gtVrLWDl~tg~~v~t~~--------------h~s~V~sVafSpdG~~LasgS- 198 (792)
...|.+++|+| ++++|++++.| +.|++||+++++++..+. |...|.+++|+|++++|++++
T Consensus 233 ~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 233 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred CCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 99999999999 89999999999 999999999999888884 789999999999999999998
Q ss_pred CCeEEEEECCCCCcccCCeEEe------cC---------------CCCeEEEEEccCC----------CeEEEEEeeCcc
Q 036953 199 GHKLYIWPYNNKEEASSPIIVL------KT---------------RRSLRAVHFHPHA----------APFVLTAEVNDL 247 (792)
Q Consensus 199 dd~V~IWDlrt~~~~~~~~~~~------~h---------------~~sVtsVafSPdG----------~~LlaS~s~~dL 247 (792)
++.|++||+++.+... ... .| ...|++++|+|++ +.|++++.+..|
T Consensus 312 dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 312 DGKLRFWDVKTKERIT---TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSI 388 (397)
T ss_dssp TSEEEEEETTTTEEEE---EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEE
T ss_pred CCeEEEEEcCCCceeE---EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcE
Confidence 5569999998887543 333 45 8899999999998 556655554444
Q ss_pred c
Q 036953 248 D 248 (792)
Q Consensus 248 r 248 (792)
.
T Consensus 389 ~ 389 (397)
T 1sq9_A 389 R 389 (397)
T ss_dssp E
T ss_pred E
Confidence 3
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.6e-20 Score=216.78 Aligned_cols=245 Identities=7% Similarity=-0.024 Sum_probs=171.2
Q ss_pred CceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC--CcCCCCC-----CeEEEEEcCCCCEEEEE
Q 036953 41 TKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC--PLVPPPR-----STIAAAFSPDGRTLAST 113 (792)
Q Consensus 41 tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~--~L~gH~~-----~V~sLafSPDG~~LaSG 113 (792)
...+..++|+|++++++++ +.++.+++|+.... .+. |.. .|.+++|||||++|++|
T Consensus 85 ~~~V~~vawSPdG~~LAs~----------------s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVL----------------SNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp SCCEEEEEECSSSSCEEEE----------------ETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEE
T ss_pred CCcEEEEEECCCCCEEEEE----------------eCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEE
Confidence 5578888888887765544 66777777774322 234 444 59999999999999999
Q ss_pred ECCCeEEEEECCCCc-------EEEEe----cCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE---EEEe--c
Q 036953 114 HGDHTVKIIDCQTGN-------CLKVL----SGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC---IGSC--D 177 (792)
Q Consensus 114 S~DGtVrIWDl~tgk-------~v~~L----~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~---v~t~--~ 177 (792)
+.||+|+|||+.+++ .+..+ .+|...|.+++|+| ++ +++++.|++|++||+.+++. ..++ .
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~ 224 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA 224 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECC
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeeccc
Confidence 999999999999885 36776 67889999999999 76 88889999999999988773 3445 4
Q ss_pred cCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEEEEE--ccCCCeEEEEEeeCc-cccCCCce
Q 036953 178 FYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHF--HPHAAPFVLTAEVND-LDSSDSSM 254 (792)
Q Consensus 178 h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVaf--SPdG~~LlaS~s~~d-Lrs~d~~~ 254 (792)
|...|.+++|+ |++|+++++++|++||+...+.. ....+|...|+.+.| +|++..++++..+.. ++..+ .+
T Consensus 225 h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~---~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d-~~ 298 (588)
T 2j04_A 225 SRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSIS---SLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLED-EL 298 (588)
T ss_dssp CSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEE---EEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESS-SE
T ss_pred ccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEE---EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeec-cE
Confidence 67889999999 68999999888999999887642 233479999999999 999987766554443 22222 11
Q ss_pred eeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCC
Q 036953 255 TRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASS 319 (792)
Q Consensus 255 ~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~S 319 (792)
.................+|.. .++ ....+. +.+.|+.+++||||+.+++.......+
T Consensus 299 ~~spd~~l~a~~d~~v~lW~~-~g~------~l~~~~-~~~~I~~va~SPdG~~lA~~~~i~~~~ 355 (588)
T 2j04_A 299 HVTADNIIAPYLEKKFKKWST-IWN------EFNNYE-TTLVIHGISLSPDGYSIAIVYDMERVA 355 (588)
T ss_dssp EEECCCSSHHHHHHHHHHTTT-TTT------SSSSSC-CEEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred EECCCceEEEEcCCEEEEEEC-CCC------ceeeec-cceEEEEEEECCCCCEEEEEEeccCce
Confidence 111100000000011111111 111 123344 478899999999999999555554333
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.85 E-value=1.5e-19 Score=198.48 Aligned_cols=245 Identities=15% Similarity=0.205 Sum_probs=181.5
Q ss_pred CCcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEE
Q 036953 68 AKRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVV 143 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsV 143 (792)
.+..++++..|+.|++|+..++ .+.+|...|.+++| +++.|++|+.||+|++||+.+++.+..+.+|...|.++
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 219 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL 219 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEE
Confidence 4567888899999999998866 36789999999999 78999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEE---EEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeE
Q 036953 144 RFHPLRSEILASGSLDHEVRLWDANTSECI---GSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPII 218 (792)
Q Consensus 144 afSP~dg~lLaSgS~DgtVrLWDl~tg~~v---~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~ 218 (792)
+|++ +++++++.|++|++||+++++.. ..+ .|...|.+++| ++++|++++ ++.|++||+++.+... .
T Consensus 220 ~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~---~ 291 (435)
T 1p22_A 220 RFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR---T 291 (435)
T ss_dssp ECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE---E
T ss_pred EEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE---E
Confidence 9975 69999999999999999987654 333 58889999999 788999988 5569999999887543 4
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEeeCccccCCCc-----eeeecCCC---cccCCCCceEEEEecCCCEEEEee-----
Q 036953 219 VLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTRATSPG---YLRYPPPAVFVANAQSGDHVSLAA----- 285 (792)
Q Consensus 219 ~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l~t~sg---~~~~p~~~~~l~~~ssG~~~~l~s----- 285 (792)
...|...|.++.|+ ++.+++++.+..++.++.. ..+..... ...+ ....++.+..+..+.++.
T Consensus 292 ~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 292 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 55688999999994 6667777665555544432 22222221 1122 222333334444444443
Q ss_pred ---------ccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCCC
Q 036953 286 ---------ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 286 ---------~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
....+.+|...|.++.+ +|+.|+ +++.|++|.-||...+.+
T Consensus 368 ~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~--------------------------s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 368 DPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV--------------------------SSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp STTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE--------------------------ECCSSSEEEEEC------
T ss_pred CccccccchheeeccCCCCCeEEEEe--CCCEEE--------------------------EEeCCCEEEEEECCCCCC
Confidence 12234567778888887 677777 799999999999877643
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.8e-19 Score=199.00 Aligned_cols=198 Identities=9% Similarity=0.023 Sum_probs=154.7
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCC---eEEEEeccCC------------------------------
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAE---SLRHLSAKYC------------------------------ 89 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~---sIrvWd~~t~------------------------------ 89 (792)
.+.++.|+++++++.++ .++...+|....+. .+..|.....
T Consensus 6 p~~~v~~s~dg~~l~~~------~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAI------IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp CCCEEEECSSSSEEEEE------ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cEEEEEecCCCCEEEEE------eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 45778899999876554 24556677766666 5666653211
Q ss_pred -----------------CcCCCCCCeEEEEEcCCCCEE-EEEECCCeEEEEECC--CCcEEEEec--CCCCCcEEEEEcc
Q 036953 90 -----------------PLVPPPRSTIAAAFSPDGRTL-ASTHGDHTVKIIDCQ--TGNCLKVLS--GHRRTPWVVRFHP 147 (792)
Q Consensus 90 -----------------~L~gH~~~V~sLafSPDG~~L-aSGS~DGtVrIWDl~--tgk~v~~L~--gH~~~VtsVafSP 147 (792)
...+|...|.+++|+|++++| ++++.|+.|+|||+. +++.+..+. .|...|.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 112566689999999999996 889999999999999 888888886 5778999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEE----Ee-ccCCCeeEEEEcCC---CcEEEEEcC-CeEEEEECCCCCcccCCeE
Q 036953 148 LRSEILASGSLDHEVRLWDANTSECIG----SC-DFYRPIASIAFHAE---GELLAVASG-HKLYIWPYNNKEEASSPII 218 (792)
Q Consensus 148 ~dg~lLaSgS~DgtVrLWDl~tg~~v~----t~-~h~s~V~sVafSpd---G~~LasgSd-d~V~IWDlrt~~~~~~~~~ 218 (792)
++++|++++.|+.|++||+.+++... .+ .|...|.+++|+|+ +++|++++. +.|++||+++++... ..
T Consensus 160 -~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~ 236 (450)
T 2vdu_B 160 -DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--KW 236 (450)
T ss_dssp -TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--EE
T ss_pred -CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--ee
Confidence 99999999999999999998876543 33 58899999999999 999999984 459999998876432 12
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 219 VLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 219 ~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
...|...|++++|+ ++++|++++.+..|+.|
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vw 267 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAW 267 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEE
Confidence 34688999999999 99988777765544443
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.85 E-value=7.7e-19 Score=192.69 Aligned_cols=228 Identities=17% Similarity=0.241 Sum_probs=172.2
Q ss_pred CcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
+..+++++.|++|++|+..++ .+.+|...|.+++|+ ++.|++|+.|++|++||+.+++.+..+.+|...|.++.
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE
Confidence 347788899999999998866 467899999999995 67899999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT 222 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h 222 (792)
| +++++++++.|+.|++||+++++++..+. |...+.+++| ++.+|++++ ++.|++||+++++... ....|
T Consensus 247 ~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~ 318 (445)
T 2ovr_B 247 Y---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH---TLTGH 318 (445)
T ss_dssp E---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE---EECCC
T ss_pred E---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE---EEcCC
Confidence 9 46889999999999999999999998885 8889999999 788999988 5559999999887543 45567
Q ss_pred CCCeEEEEEccCCCeEEEEEeeCccccCCC-----ceeeecCCCc------ccCCCCceEEEEecCCCEEEEeec-----
Q 036953 223 RRSLRAVHFHPHAAPFVLTAEVNDLDSSDS-----SMTRATSPGY------LRYPPPAVFVANAQSGDHVSLAAE----- 286 (792)
Q Consensus 223 ~~sVtsVafSPdG~~LlaS~s~~dLrs~d~-----~~~l~t~sg~------~~~p~~~~~l~~~ssG~~~~l~s~----- 286 (792)
...+.++.++ ++.+++++.+..++.++. ...+.....+ ..+. ...++.+..+..+.++.-
T Consensus 319 ~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 319 QSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp CSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred cccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCce
Confidence 8888888774 666777666555554432 2222221111 1121 123333333344444330
Q ss_pred cCcc-----cCCCceEEEeEECCCCcEEE
Q 036953 287 LPLM-----SSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 287 l~~l-----~gh~~~VwdV~~SpDGr~lv 310 (792)
...+ .+|...|++++|+|+|.+++
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEE
Confidence 0111 35789999999999999998
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=1.6e-19 Score=191.58 Aligned_cols=221 Identities=17% Similarity=0.170 Sum_probs=168.5
Q ss_pred cCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEEec-------------CCCCCcEEEEEccCCCCEEEEE
Q 036953 91 LVPPPRSTIAAAFSP-DGRTLASTHGDHTVKIIDCQTGNCLKVLS-------------GHRRTPWVVRFHPLRSEILASG 156 (792)
Q Consensus 91 L~gH~~~V~sLafSP-DG~~LaSGS~DGtVrIWDl~tgk~v~~L~-------------gH~~~VtsVafSP~dg~lLaSg 156 (792)
+.+|.+.|++++|+| ++++|++|+.||.|+|||+.+++....+. +|...|.+++|+|+++.+|+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 567999999999999 99999999999999999999876544332 5999999999999777899999
Q ss_pred eCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCC---cEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEc
Q 036953 157 SLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEG---ELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFH 232 (792)
Q Consensus 157 S~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG---~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafS 232 (792)
+.|+.|++||+.+++.+..+.+...+.++.|++.+ .+|++++. +.|++||+++++.. .....|...|++++|+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS---HILQGHRQEILAVSWS 195 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC---EEECCCCSCEEEEEEC
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee---eeecCCCCcEEEEEEC
Confidence 99999999999999999999999999999999854 48888884 45999999887643 3556688999999999
Q ss_pred cCCCeEEEEE-eeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEE
Q 036953 233 PHAAPFVLTA-EVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 233 PdG~~LlaS~-s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~ 311 (792)
|+++++++++ .+..++.++...... .........+.. ..........|...|.+++|+|+|++++
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~- 261 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASG-----------CLITLDQHNGKK--SQAVESANTAHNGKVNGLCFTSDGLHLL- 261 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSC-----------CSEECCTTTTCS--CCCTTTSSCSCSSCEEEEEECTTSSEEE-
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCc-----------cccccccccccc--ceeeccccccccCceeEEEEcCCCCEEE-
Confidence 9999755444 444444433221000 000000000000 0011223456899999999999999999
Q ss_pred ccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 312 HASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 312 ~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
+++.|++|.-|+.-.++
T Consensus 262 -------------------------~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 262 -------------------------TVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp -------------------------EEETTSCEEEEETTTCC
T ss_pred -------------------------EecCCCeEEEEECCCCc
Confidence 78889999999976663
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=8e-20 Score=210.95 Aligned_cols=267 Identities=16% Similarity=0.126 Sum_probs=191.5
Q ss_pred ceeeeEEeeCCCceEeecCCCceeecCC-----------cEEEEEeCCCeEEEEeccCCC----cC-CCCCCeEEEEEcC
Q 036953 42 KYVPKRQWVDASKLKTCGPSDSSVRDAK-----------RGLVSWVEAESLRHLSAKYCP----LV-PPPRSTIAAAFSP 105 (792)
Q Consensus 42 k~V~s~aWspd~~lla~G~~a~sv~d~~-----------~~L~S~s~d~sIrvWd~~t~~----L~-gH~~~V~sLafSP 105 (792)
.-+..++|+|||++++++..+..+++++ ..-+....++..+.|+....+ +. .|...|.+++|||
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSP 95 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSP 95 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECS
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECC
Confidence 5789999999999999988877774311 123344556666666655332 22 6788899999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEEEEecCCCC-----CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc-------EE
Q 036953 106 DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRR-----TPWVVRFHPLRSEILASGSLDHEVRLWDANTSE-------CI 173 (792)
Q Consensus 106 DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~-----~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~-------~v 173 (792)
||++||+++.||+|+|||... ++..+. |.. .|.+++|+| ++++|++|+.||+|++||+.+++ .+
T Consensus 96 dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 96 IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceee
Confidence 999999999999999999644 677777 765 499999999 99999999999999999999875 25
Q ss_pred EEe-----ccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEE-ecCCCCeEEEEEccCCCeEEEEEeeCcc
Q 036953 174 GSC-----DFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIV-LKTRRSLRAVHFHPHAAPFVLTAEVNDL 247 (792)
Q Consensus 174 ~t~-----~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~-~~h~~sVtsVafSPdG~~LlaS~s~~dL 247 (792)
.++ +|...|.+++|+|+| +++++.|+.|++||+...+........ ..|...|.+++|+ |+.+++++ +.
T Consensus 172 ~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~-- 245 (588)
T 2j04_A 172 SSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG-- 245 (588)
T ss_dssp EEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS--
T ss_pred eeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC--
Confidence 554 356799999999999 555555667999999877632111223 3577899999999 56555443 22
Q ss_pred ccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEE--CCCCcEEEEccccccCCCCcccc
Q 036953 248 DSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVS--IDDSRIDLQHASRRASSSNMQIE 325 (792)
Q Consensus 248 rs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~--SpDGr~lv~~~~~~~~Sg~v~~~ 325 (792)
.+.+|....+....+.. +|...|+++.| +|||..++++..... ++-+.
T Consensus 246 ---------------------tIkLWd~~~~~~~~~~~------gh~~~V~~va~~~s~d~~~La~a~edG~---klw~~ 295 (588)
T 2j04_A 246 ---------------------YVHKIDLKNYSISSLKT------GSLENFHIIPLNHEKESTILLMSNKTSY---KVLLE 295 (588)
T ss_dssp ---------------------EEEEEETTTTEEEEEEC------SCCSCCCEEEETTCSSCEEEEECSSCEE---EEEES
T ss_pred ---------------------eEEEEECCCCeEEEEEc------CCCceEEEEEeeeCCCCCEEEEEcCCCC---EEEee
Confidence 46667766544433332 49999999999 999998883322111 12221
Q ss_pred ccccccccCCC--CCcccccccccccc
Q 036953 326 PSASLHLQSDS--NVEQDGTVPSMETF 350 (792)
Q Consensus 326 ~s~~~q~~~~~--sgs~D~tv~p~~~~ 350 (792)
- ..++.+|. .+..|+++.-|...
T Consensus 296 d--~~~~spd~~l~a~~d~~v~lW~~~ 320 (588)
T 2j04_A 296 D--ELHVTADNIIAPYLEKKFKKWSTI 320 (588)
T ss_dssp S--SEEEECCCSSHHHHHHHHHHTTTT
T ss_pred c--cEEECCCceEEEEcCCEEEEEECC
Confidence 1 34456666 33449999999863
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=7.9e-20 Score=190.52 Aligned_cols=228 Identities=11% Similarity=0.031 Sum_probs=170.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc---EEEEecCCCCCcEEEEEccCCCC-EEEEEeCCCeEEEEEC
Q 036953 92 VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN---CLKVLSGHRRTPWVVRFHPLRSE-ILASGSLDHEVRLWDA 167 (792)
Q Consensus 92 ~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk---~v~~L~gH~~~VtsVafSP~dg~-lLaSgS~DgtVrLWDl 167 (792)
.+|.+.|++++|+|++++|++++.|+.|+|||+.+++ ....+.+|...|.+++|+| +++ +|++++.|+.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEe
Confidence 4799999999999999999999999999999998877 3455568999999999999 899 9999999999999999
Q ss_pred -CCCcEEEEec--cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCC---------CCcccCCeEEecCCCCeEEEEEccC
Q 036953 168 -NTSECIGSCD--FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNN---------KEEASSPIIVLKTRRSLRAVHFHPH 234 (792)
Q Consensus 168 -~tg~~v~t~~--h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt---------~~~~~~~~~~~~h~~sVtsVafSPd 234 (792)
.+++...... |...|.+++|+| +++|++++ ++.|++||+++ .+... ...+...|++++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 87 IGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN----NTKVKNKIFTMDTNSS 161 (342)
T ss_dssp SSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS----SSSSCCCEEEEEECSS
T ss_pred ccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeee----EEeeCCceEEEEecCC
Confidence 8887755556 899999999999 99999888 55599999986 44332 2347889999999998
Q ss_pred CCeEEEEEee-----Ccccc-CCCceeeec--CCC---cccCCC-CceEEEEecCCCEEEEee-----------ccCccc
Q 036953 235 AAPFVLTAEV-----NDLDS-SDSSMTRAT--SPG---YLRYPP-PAVFVANAQSGDHVSLAA-----------ELPLMS 291 (792)
Q Consensus 235 G~~LlaS~s~-----~dLrs-~d~~~~l~t--~sg---~~~~p~-~~~~l~~~ssG~~~~l~s-----------~l~~l~ 291 (792)
+ +++++.+ |+++. ......... ... ...+.+ ....++.+..+..+.++. ....+.
T Consensus 162 ~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 162 R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp E--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred c--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 7 6666554 44443 222111111 111 233444 444455555555555422 111334
Q ss_pred CCC---------ceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 292 SLP---------FLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 292 gh~---------~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
.|. ..|.+++|+|+|++|+ +++.|++|.-||...++
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~--------------------------~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLY--------------------------TAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEE--------------------------EEETTSCEEEEETTTTE
T ss_pred cccccccccccceeEEEEEEcCCCCEEE--------------------------EecCCceEEEEcCccHh
Confidence 454 4999999999999998 78888999999976653
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.8e-19 Score=196.31 Aligned_cols=224 Identities=11% Similarity=0.087 Sum_probs=167.1
Q ss_pred ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEecc--CCC----cC--CCCCCeEEEEEcCCCCEEEEE
Q 036953 42 KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAK--YCP----LV--PPPRSTIAAAFSPDGRTLAST 113 (792)
Q Consensus 42 k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~--t~~----L~--gH~~~V~sLafSPDG~~LaSG 113 (792)
..+..++|+|+++.+ ++++..|+.|++|+.. .+. +. .|...|.+++|+|++++|+++
T Consensus 103 ~~v~~~~~s~d~~~l---------------~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 103 SYIRNLRLTSDESRL---------------IACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp CCEEEEEECTTSSEE---------------EEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEEcCCCCEE---------------EEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEE
Confidence 357888888887653 1333456677777766 332 22 577889999999999999999
Q ss_pred ECCCeEEEEECCCCcEEE----EecCCCCCcEEEEEccCC---CCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCCeeE
Q 036953 114 HGDHTVKIIDCQTGNCLK----VLSGHRRTPWVVRFHPLR---SEILASGSLDHEVRLWDANTSECIGSC--DFYRPIAS 184 (792)
Q Consensus 114 S~DGtVrIWDl~tgk~v~----~L~gH~~~VtsVafSP~d---g~lLaSgS~DgtVrLWDl~tg~~v~t~--~h~s~V~s 184 (792)
+.|+.|++|++.+++... .+.+|...|++++|+| + +++|++++.|++|++||+++++++..+ .|...|.+
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEE
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEE
Confidence 999999999998876543 7788999999999999 7 889999999999999999999888774 58899999
Q ss_pred EEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEe-----------------------cCCCCeEEEEEccCCCeEEE
Q 036953 185 IAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVL-----------------------KTRRSLRAVHFHPHAAPFVL 240 (792)
Q Consensus 185 VafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~-----------------------~h~~sVtsVafSPdG~~Lla 240 (792)
++|+ ++++|++++ ++.|++||+++++.... .... .....|.+++|+|+++++++
T Consensus 247 ~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 324 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLST-FDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF 324 (450)
T ss_dssp EEEC-STTEEEEEESSSEEEEEETTTCCEEEE-EECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred EEEC-CCCEEEEEeCCCeEEEEECCCCcEeee-ecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence 9999 999999998 55699999998875431 1100 23467999999999998887
Q ss_pred EE-eeCccccCCCceeeecCCCcccCCCCceEEEEe--cCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 241 TA-EVNDLDSSDSSMTRATSPGYLRYPPPAVFVANA--QSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 241 S~-s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~--ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
++ .+. .+.+|.. ..+....... .+..+ ..|++++|+|++.+++
T Consensus 325 ~~~~d~-----------------------~i~iw~~~~~~~~~l~~~~---~~~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 325 FVEATK-----------------------CIIILEMSEKQKGDLALKQ---IITFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp EETTCS-----------------------EEEEEEECSSSTTCEEEEE---EEECS-SCEEEEEEETTEEEEE
T ss_pred EECCCC-----------------------eEEEEEeccCCCCceeecc---EeccC-CceEEEEecCCcEEEE
Confidence 77 333 2444444 2221111111 12334 7799999999654444
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=5.5e-20 Score=223.42 Aligned_cols=211 Identities=13% Similarity=0.053 Sum_probs=164.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS 170 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg 170 (792)
..+|...|++++|+|++++||+|+.||+|+|||..+.+....+ .|...|++++|+| +++|++++.|++|++||++++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTC
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCC
Confidence 4578999999999999999999999999999999887766655 4888999999999 569999999999999999999
Q ss_pred cEEEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCC--------eEEecCCCCeEEEEEccCCCeEEEE
Q 036953 171 ECIGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSP--------IIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 171 ~~v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~--------~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
+++..+.+...|++++|+|++++|++++ ++.|++||+++.+..... .....|...|++++|+|++..++++
T Consensus 90 ~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 90 KVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp SEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 9999998889999999999999999998 455999999887642100 0124578899999999975444444
Q ss_pred Ee-eCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeec------------cCcccCCCceEEEeEECCCCcE
Q 036953 242 AE-VNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAE------------LPLMSSLPFLIVPSVSIDDSRI 308 (792)
Q Consensus 242 ~s-~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~------------l~~l~gh~~~VwdV~~SpDGr~ 308 (792)
+. +..+ .|+ ...+........ ......|...|++++|+|||++
T Consensus 170 g~~dg~v-lWd-----------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 170 SYEYVTL-TYS-----------------------LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp ECSSCEE-EEE-----------------------TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred EeCCCcE-EEE-----------------------CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 43 3323 332 222211111110 0223456789999999999999
Q ss_pred EEEccccccCCCCccccccccccccCCCCCccccccccccccCCCC
Q 036953 309 DLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVIP 354 (792)
Q Consensus 309 lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~p 354 (792)
|+ +++.|++|.-||.-.+++
T Consensus 226 la--------------------------sgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 226 II--------------------------TIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EE--------------------------EEETTCCEEEEETTTCCE
T ss_pred EE--------------------------EEECCCeEEEEECCCCcE
Confidence 99 899999999999877754
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=1e-18 Score=179.76 Aligned_cols=226 Identities=19% Similarity=0.322 Sum_probs=180.1
Q ss_pred CCceEeeecccceeeC-----CCCceeeeEEeeCCCceEeecCCCceeecC------------------------CcEEE
Q 036953 23 RRARNVSRLLAHREIS-----PKTKYVPKRQWVDASKLKTCGPSDSSVRDA------------------------KRGLV 73 (792)
Q Consensus 23 s~~r~V~~l~~~rels-----~~tk~V~s~aWspd~~lla~G~~a~sv~d~------------------------~~~L~ 73 (792)
.+.+++|+....+.+. .+...+.+++|+++++++++|..+..+..+ +..++
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~ 123 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 123 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEE
Confidence 4568999987765443 345579999999999998887665544321 12355
Q ss_pred EEeCCCeEEEEeccCC-----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc----EEEEecCCCCCcEEEE
Q 036953 74 SWVEAESLRHLSAKYC-----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN----CLKVLSGHRRTPWVVR 144 (792)
Q Consensus 74 S~s~d~sIrvWd~~t~-----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk----~v~~L~gH~~~VtsVa 144 (792)
++..++.++.|+.... .+.+|...+..+.|++++++|++++.|+.|+|||+.+++ .......|.+.|..+.
T Consensus 124 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 203 (318)
T 4ggc_A 124 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 203 (318)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEE
T ss_pred EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEE
Confidence 6677888888877654 356899999999999999999999999999999998765 3455667889999999
Q ss_pred EccCCCCEEE--EEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEE
Q 036953 145 FHPLRSEILA--SGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIV 219 (792)
Q Consensus 145 fSP~dg~lLa--SgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~ 219 (792)
++|.+..++. +++.+++|++||.+.........+...+..+.|+++++.+++++ ++.|+|||+++++... .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~---~l 280 (318)
T 4ggc_A 204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---EL 280 (318)
T ss_dssp ECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EE
T ss_pred ecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE---EE
Confidence 9995666554 55678999999999999888888999999999999999887764 4559999999887543 55
Q ss_pred ecCCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 220 LKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 220 ~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
.+|...|++++|+|++++|++++.+..|+.|+
T Consensus 281 ~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 281 KGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 67999999999999999888877766666654
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=6.9e-19 Score=193.06 Aligned_cols=245 Identities=16% Similarity=0.234 Sum_probs=182.7
Q ss_pred CcEEEEEeCCCeEEEEeccCC----CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYC----PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~----~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
+..+++++.|+.|++|+..++ .+.+|...|.+++|+ ++.|++|+.|++|++||+.+++.+..+.+|...|.++.
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 206 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 206 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEE
Confidence 567889999999999998866 467899999999997 67999999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT 222 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h 222 (792)
|++ +.+++++.|++|++||+++++++..+ .|...+.+++| ++++|++++ ++.|++||+++.+... ....|
T Consensus 207 ~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~ 278 (445)
T 2ovr_B 207 LHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH---TLQGH 278 (445)
T ss_dssp EET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE---EECCC
T ss_pred ecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE---EecCC
Confidence 965 78999999999999999999988887 58899999999 788888888 4559999998876432 44568
Q ss_pred CCCeEEEEEccCCCeEEEEEeeCccccCCCc-----eeeecCCCccc-CCCCceEEEEecCCCEEEEee-----ccCcc-
Q 036953 223 RRSLRAVHFHPHAAPFVLTAEVNDLDSSDSS-----MTRATSPGYLR-YPPPAVFVANAQSGDHVSLAA-----ELPLM- 290 (792)
Q Consensus 223 ~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~-----~~l~t~sg~~~-~p~~~~~l~~~ssG~~~~l~s-----~l~~l- 290 (792)
...|.+++| ++..+++++.+..++.++.. ..+........ .......++.+..+..+.++. ....+
T Consensus 279 ~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 889999999 78877777765555544322 22221111100 000111222222222333322 01112
Q ss_pred --cCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 291 --SSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 291 --~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
..|...|.++.++ +++++ +++.|++|.-|+...++
T Consensus 357 ~~~~~~~~v~~~~~~--~~~l~--------------------------s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFN--KNFVI--------------------------TSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp STTSCSSCEEEEEEC--SSEEE--------------------------EEETTSEEEEEETTTCC
T ss_pred cCCCCCCCEEEEEEC--CCEEE--------------------------EEeCCCeEEEEECCCCc
Confidence 2377888888884 57777 78899999999977664
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.83 E-value=3.3e-18 Score=182.73 Aligned_cols=258 Identities=13% Similarity=0.112 Sum_probs=187.0
Q ss_pred CCCceEeeecccceeeC--CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc---CCCCC
Q 036953 22 RRRARNVSRLLAHREIS--PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL---VPPPR 96 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels--~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L---~gH~~ 96 (792)
..+.+.+|+....+.+. .....+..++|+++++.+ +++...++.|++|+..++++ ..+..
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l---------------~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKV---------------YVANAHSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE---------------EEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEE---------------EEECCCCCeEEEEECCCCeEEEEEECCC
Confidence 45678899887665543 122346777888876533 12334567788888766532 22334
Q ss_pred CeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEE-EEEeCCCeEEEEECCCCcEEE
Q 036953 97 STIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEIL-ASGSLDHEVRLWDANTSECIG 174 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lL-aSgS~DgtVrLWDl~tg~~v~ 174 (792)
.+.+++|+|++++|+.++ .|+.|++||+.+++.+..+..| ..+.+++|+| +++.+ ++++.|+.|++||+.+++.+.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 899999999999886555 6799999999999988888755 4689999999 77766 788889999999999999998
Q ss_pred EeccCCCeeEEEEcCCCcEEE-EEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCC
Q 036953 175 SCDFYRPIASIAFHAEGELLA-VAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDS 252 (792)
Q Consensus 175 t~~h~s~V~sVafSpdG~~La-sgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~ 252 (792)
.+.....+.+++|+|++++|+ +++ ++.|++||+++.+.. ....+...+.+++|+|+++++++++...
T Consensus 153 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~~~~~~~~~~~~~g~~l~~~~~~~------- 221 (391)
T 1l0q_A 153 TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI----DTVKVEAAPSGIAVNPEGTKAYVTNVDK------- 221 (391)
T ss_dssp EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE----EEEECSSEEEEEEECTTSSEEEEEEECS-------
T ss_pred EEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE----EEEecCCCccceEECCCCCEEEEEecCc-------
Confidence 888778889999999999875 445 456999999887643 3444667899999999999888776411
Q ss_pred ceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEccccccCCCCccccccccccc
Q 036953 253 SMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHL 332 (792)
Q Consensus 253 ~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~ 332 (792)
....+.+|+...+..+..... + ..+..+.++|||+.+++
T Consensus 222 -------------~~~~v~~~d~~~~~~~~~~~~------~-~~~~~~~~s~dg~~l~~--------------------- 260 (391)
T 1l0q_A 222 -------------YFNTVSMIDTGTNKITARIPV------G-PDPAGIAVTPDGKKVYV--------------------- 260 (391)
T ss_dssp -------------SCCEEEEEETTTTEEEEEEEC------C-SSEEEEEECTTSSEEEE---------------------
T ss_pred -------------CCCcEEEEECCCCeEEEEEec------C-CCccEEEEccCCCEEEE---------------------
Confidence 012345555555444333321 2 24688999999987740
Q ss_pred cCCCCCccccccccccccCC
Q 036953 333 QSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 333 ~~~~sgs~D~tv~p~~~~~~ 352 (792)
+++.|.+|.-||...+
T Consensus 261 ----s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 261 ----ALSFXNTVSVIDTATN 276 (391)
T ss_dssp ----EETTTTEEEEEETTTT
T ss_pred ----EcCCCCEEEEEECCCC
Confidence 4567888888886555
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.82 E-value=5.5e-19 Score=194.51 Aligned_cols=214 Identities=16% Similarity=0.186 Sum_probs=161.3
Q ss_pred CCCceEeeecccc-------------eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC
Q 036953 22 RRRARNVSRLLAH-------------REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY 88 (792)
Q Consensus 22 ~s~~r~V~~l~~~-------------rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t 88 (792)
..+.+.+|+.... ..+..+...+..+.|++++. ..++++..++.|++|+...
T Consensus 149 ~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~---------------~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 149 PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN---------------GYLLSASDDHTICLWDINA 213 (430)
T ss_dssp SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST---------------TEEEEECTTSCEEEEETTS
T ss_pred CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC---------------CeEEEEeCCCeEEEEeCCC
Confidence 3456888887541 11223444556666666543 2566677889999999875
Q ss_pred C-----------CcCCCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCC---cEEEEecCCCCCcEEEEEccCCCCEE
Q 036953 89 C-----------PLVPPPRSTIAAAFSP-DGRTLASTHGDHTVKIIDCQTG---NCLKVLSGHRRTPWVVRFHPLRSEIL 153 (792)
Q Consensus 89 ~-----------~L~gH~~~V~sLafSP-DG~~LaSGS~DGtVrIWDl~tg---k~v~~L~gH~~~VtsVafSP~dg~lL 153 (792)
. .+.+|...|.+++|+| ++..|++++.|+.|++||+.++ +.+..+..|...|++++|+|++..++
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEE
Confidence 2 3458999999999999 7889999999999999999987 57788889999999999999444589
Q ss_pred EEEeCCCeEEEEECCC-CcEEEEe-ccCCCeeEEEEcCCCc-EEEEEc-CCeEEEEECCCCCcc-----------cCCeE
Q 036953 154 ASGSLDHEVRLWDANT-SECIGSC-DFYRPIASIAFHAEGE-LLAVAS-GHKLYIWPYNNKEEA-----------SSPII 218 (792)
Q Consensus 154 aSgS~DgtVrLWDl~t-g~~v~t~-~h~s~V~sVafSpdG~-~LasgS-dd~V~IWDlrt~~~~-----------~~~~~ 218 (792)
++++.|++|++||+++ ++++..+ .|...|.+++|+|+++ +|++++ ++.|+|||++..... .....
T Consensus 294 ~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 294 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 373 (430)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE
T ss_pred EEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEE
Confidence 9999999999999998 5666666 4889999999999995 677777 556999999873321 11123
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEe-eCccccC
Q 036953 219 VLKTRRSLRAVHFHPHAAPFVLTAE-VNDLDSS 250 (792)
Q Consensus 219 ~~~h~~sVtsVafSPdG~~LlaS~s-~~dLrs~ 250 (792)
...|...|++++|+|+++.++++++ +..|..|
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred cCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 3457888999999999995555444 4444443
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.82 E-value=5.3e-18 Score=183.66 Aligned_cols=251 Identities=9% Similarity=0.038 Sum_probs=180.7
Q ss_pred CCceEeeecccceeeC--------CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----C
Q 036953 23 RRARNVSRLLAHREIS--------PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC----P 90 (792)
Q Consensus 23 s~~r~V~~l~~~rels--------~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~----~ 90 (792)
.+...+|+....+... .+...+..++|++++. .++++..++.|++|+..++ .
T Consensus 143 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~~~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 143 DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE----------------LWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE----------------EEEEEGGGTEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE----------------EEEEECCCCEEEEEECCCceEEEE
Confidence 3446777665544332 1223455566655544 3445556788889988765 3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEe--------CCCe
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGS--------LDHE 161 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS--------~Dgt 161 (792)
+..|...+.+++|+|+++++++++ .|+.|++||+.+++.+..+..+ ..+.+++|+| +++++++++ .|+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~ 284 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQFSASNQESGGGR 284 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT-TSSEEEEEEEESCTTCSCCEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC-CCCEEEEEECCCCccccCCCe
Confidence 457888999999999999886555 7999999999999988888754 4599999999 888888887 5889
Q ss_pred EEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEE-c-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEE
Q 036953 162 VRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVA-S-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFV 239 (792)
Q Consensus 162 VrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~Lasg-S-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~Ll 239 (792)
|++||+++++.+..+.+...+.+++|+|+++.++++ + ++.|++||+++++.. ....+...+.+++|+|+++.++
T Consensus 285 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~----~~~~~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 285 LGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ----KSIPVFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE----EEEECSSSEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE----EEecCCCCCCeEEEcCCCCEEE
Confidence 999999999988888777889999999999765444 5 566999999877643 2345677899999999999888
Q ss_pred EEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 240 LTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 240 aS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
+++...+.... ... +.......+.+|+..++..+.... ....+..++|+|||++++
T Consensus 361 ~~~~~~~~~~~--~~~------~~g~~dg~v~~~d~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~ 416 (433)
T 3bws_A 361 VSCRGPNHPTE--GYL------KKGLVLGKVYVIDTTTDTVKEFWE-------AGNQPTGLDVSPDNRYLV 416 (433)
T ss_dssp EEECCCCCTTT--CTT------SCCSSCCEEEEEETTTTEEEEEEE-------CSSSEEEEEECTTSCEEE
T ss_pred EEecCCCcccc--ccc------cccccceEEEEEECCCCcEEEEec-------CCCCCceEEEcCCCCEEE
Confidence 77753321100 000 001112356777766666554443 234689999999999987
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=5.3e-19 Score=209.82 Aligned_cols=211 Identities=21% Similarity=0.239 Sum_probs=167.1
Q ss_pred CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC--CCcEEEEecCCCCCcEEEEEccCC--CCEEEEEeCCCeEEEE
Q 036953 90 PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQ--TGNCLKVLSGHRRTPWVVRFHPLR--SEILASGSLDHEVRLW 165 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~--tgk~v~~L~gH~~~VtsVafSP~d--g~lLaSgS~DgtVrLW 165 (792)
.+.+|.+.|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|.+.|++++|++ + +++|++|+.||+|++|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeEEEE
Confidence 357899999999999999999999999999999997 5567888999999999999998 5 8999999999999999
Q ss_pred ECCCCc--EEEEe-ccCCCeeEEEEcCC--CcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEcc------
Q 036953 166 DANTSE--CIGSC-DFYRPIASIAFHAE--GELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHP------ 233 (792)
Q Consensus 166 Dl~tg~--~v~t~-~h~s~V~sVafSpd--G~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSP------ 233 (792)
|+.+++ .+..+ .|...|.+++|+|+ +++|++++ ++.|++||++...... ......|...|++++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEEECCSSCEEEEEECCCC----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEeecCCCceEEEEecCcccccc
Confidence 999986 44444 58899999999999 99999998 5569999998875443 445667889999999999
Q ss_pred -------CCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCC-
Q 036953 234 -------HAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDD- 305 (792)
Q Consensus 234 -------dG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpD- 305 (792)
++..+++++.+..|+ +|+...+..... ....+.+|...|.+++|+|+
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~-----------------------iwd~~~~~~~~~--~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVK-----------------------IWKYNSDAQTYV--LESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp -----CGGGCCEEEEETTSCEE-----------------------EEEEETTTTEEE--EEEEECCCSSCEEEEEECCCC
T ss_pred cccccCCCCCEEEEEECCCeEE-----------------------EEeccCCcccce--eeeeecCCCCcEEEEEeccCC
Confidence 477777666554333 333333321100 01124568999999999999
Q ss_pred --CcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 306 --SRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 306 --Gr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
|++++ +++.|++|.-|+...++
T Consensus 217 ~~~~~l~--------------------------s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 217 LLRSYLA--------------------------SVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp SSSEEEE--------------------------EEESSSCEEEEEESSSS
T ss_pred CCCCEEE--------------------------EEecCCEEEEecCCCCC
Confidence 89999 77788888888877763
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.2e-19 Score=188.66 Aligned_cols=179 Identities=13% Similarity=0.070 Sum_probs=139.9
Q ss_pred cCCcEEEEEeCCCeEEEEeccCCCcCC--CCCCeEEEEEcCCCCEEEEEECCCeEEEEECC---------CCcEEEEec-
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYCPLVP--PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQ---------TGNCLKVLS- 134 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~~L~g--H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~---------tgk~v~~L~- 134 (792)
..+..+++++.|++|++|+..+++... ....|.++.|+|+ +++++.|++|++|+.. +++.+..+.
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 345678899999999999998664211 1355777788887 9999999999999665 555455554
Q ss_pred CCCCCcEEEEEcc-CCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCC
Q 036953 135 GHRRTPWVVRFHP-LRSEILASGSLDHEVRLWDANTSECIGSC--DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNK 210 (792)
Q Consensus 135 gH~~~VtsVafSP-~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~ 210 (792)
+|.+.|.+++|+| .+++++++++.|++|++||+++++++..+ .+...+.+++|+|++.+|++|+ ++.|++||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 6778999999998 35689999999999999999999987766 3556799999999999999988 555999999988
Q ss_pred CcccCCeEEec-CCCCeEEEEEccCCCeEEEEEeeCccccCC
Q 036953 211 EEASSPIIVLK-TRRSLRAVHFHPHAAPFVLTAEVNDLDSSD 251 (792)
Q Consensus 211 ~~~~~~~~~~~-h~~sVtsVafSPdG~~LlaS~s~~dLrs~d 251 (792)
+... ..... |...|++++|+|++.+|++++. ..++.|+
T Consensus 203 ~~~~--~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd 241 (343)
T 3lrv_A 203 DQAS--SRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFD 241 (343)
T ss_dssp TSCC--EECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEE
T ss_pred CCCc--cEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEE
Confidence 7541 23444 8899999999999997777663 3444443
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=5.1e-19 Score=190.39 Aligned_cols=205 Identities=12% Similarity=0.084 Sum_probs=143.2
Q ss_pred CCCceeeeEEeeCCCceEeecCCCce-eec-----------------------CCcEEEEEeCCCeEEEEeccCCCc---
Q 036953 39 PKTKYVPKRQWVDASKLKTCGPSDSS-VRD-----------------------AKRGLVSWVEAESLRHLSAKYCPL--- 91 (792)
Q Consensus 39 ~~tk~V~s~aWspd~~lla~G~~a~s-v~d-----------------------~~~~L~S~s~d~sIrvWd~~t~~L--- 91 (792)
.+...+.+++|+|+++++++|..... +++ .+..++++..+++|++||..+++.
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 34456777777777777666543321 111 111223445567888888765531
Q ss_pred CCCCCCeEEEEEcCCC-----------------------------------CEEEE--EECCCeEEEEECCCCc------
Q 036953 92 VPPPRSTIAAAFSPDG-----------------------------------RTLAS--THGDHTVKIIDCQTGN------ 128 (792)
Q Consensus 92 ~gH~~~V~sLafSPDG-----------------------------------~~LaS--GS~DGtVrIWDl~tgk------ 128 (792)
..|...|.+++|+++. +.++. |+.||.|++||+.+++
T Consensus 97 ~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~ 176 (355)
T 3vu4_A 97 IKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQD 176 (355)
T ss_dssp EECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC--------
T ss_pred EECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccc
Confidence 2355677777776542 34444 5778999999998765
Q ss_pred ----------EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCe-EEEEECCCCcEEEEec---cCCCeeEEEEcCCCcEE
Q 036953 129 ----------CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHE-VRLWDANTSECIGSCD---FYRPIASIAFHAEGELL 194 (792)
Q Consensus 129 ----------~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dgt-VrLWDl~tg~~v~t~~---h~s~V~sVafSpdG~~L 194 (792)
++..+.+|.+.|++++|+| ++++|++++.|++ |++||+++++++..+. |...|.+++|+|++++|
T Consensus 177 ~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 177 QGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp ----------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE
T ss_pred ccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE
Confidence 2678899999999999999 9999999999998 9999999999999986 88999999999999999
Q ss_pred EEEcC-CeEEEEECCCCCcccCCeEE-------------------e--cCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 195 AVASG-HKLYIWPYNNKEEASSPIIV-------------------L--KTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 195 asgSd-d~V~IWDlrt~~~~~~~~~~-------------------~--~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
++++. +.|+|||++...... .... . ........++|+++++.+++.+.+.
T Consensus 256 ~s~s~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 256 AVVSDKWTLHVFEIFNDQDNK-RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp EEEETTCEEEEEESSCCSCCC-SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred EEEECCCEEEEEEccCCCCcc-cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 99985 559999997654221 0000 0 0122236688999998777766543
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.81 E-value=3.3e-18 Score=185.30 Aligned_cols=237 Identities=11% Similarity=0.037 Sum_probs=178.9
Q ss_pred EEEEEeCCCeEEEEeccCCC---------cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcE
Q 036953 71 GLVSWVEAESLRHLSAKYCP---------LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPW 141 (792)
Q Consensus 71 ~L~S~s~d~sIrvWd~~t~~---------L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~Vt 141 (792)
.+++...++.|++|+..+++ +.+|...|.+++|+++++.+++++.|+.|++||+.+++.+..+..|...+.
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~ 215 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK 215 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee
Confidence 34444556778888887552 347888999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEE-EEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc---------CCeEEEEECCCCC
Q 036953 142 VVRFHPLRSEIL-ASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS---------GHKLYIWPYNNKE 211 (792)
Q Consensus 142 sVafSP~dg~lL-aSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS---------dd~V~IWDlrt~~ 211 (792)
+++|+| +++++ ++++.|++|++||+++++.+..+.....+.+++|+|++++|++++ ++.|++||+++++
T Consensus 216 ~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 216 ILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 999999 77766 555589999999999999998888777899999999999988877 3459999998876
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCccc
Q 036953 212 EASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMS 291 (792)
Q Consensus 212 ~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~ 291 (792)
... ...+...+..++|+|+++.+++++... ..+.+|+..++.......
T Consensus 295 ~~~----~~~~~~~~~~~~~~~~g~~l~~~~~~~----------------------~~v~v~d~~~~~~~~~~~------ 342 (433)
T 3bws_A 295 LID----TIGPPGNKRHIVSGNTENKIYVSDMCC----------------------SKIEVYDLKEKKVQKSIP------ 342 (433)
T ss_dssp EEE----EEEEEECEEEEEECSSTTEEEEEETTT----------------------TEEEEEETTTTEEEEEEE------
T ss_pred EEe----eccCCCCcceEEECCCCCEEEEEecCC----------------------CEEEEEECCCCcEEEEec------
Confidence 432 334455789999999999887776421 234455544444433322
Q ss_pred CCCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 292 SLPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 292 gh~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
+...+..++++|||+++++.....+.. ....-.+|+.|.+|.-||...+
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~-----------~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHP-----------TEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCT-----------TTCTTSCCSSCCEEEEEETTTT
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCcc-----------ccccccccccceEEEEEECCCC
Confidence 456688999999999887433222111 0111226788999999986555
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=6.4e-18 Score=180.50 Aligned_cols=205 Identities=13% Similarity=0.202 Sum_probs=159.1
Q ss_pred EEEEEeCCCeEEEEeccCCCc---CCCCCCeEEEEEcCCCCEE-EEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEc
Q 036953 71 GLVSWVEAESLRHLSAKYCPL---VPPPRSTIAAAFSPDGRTL-ASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFH 146 (792)
Q Consensus 71 ~L~S~s~d~sIrvWd~~t~~L---~gH~~~V~sLafSPDG~~L-aSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafS 146 (792)
.++++..++.|++|+..++++ ..+...+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~s 82 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEEC
Confidence 456677899999999887642 1233459999999999987 566689999999999999998888655 89999999
Q ss_pred cCCCCEEE-EEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEE-EEEc-CCeEEEEECCCCCcccCCeEEecCC
Q 036953 147 PLRSEILA-SGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELL-AVAS-GHKLYIWPYNNKEEASSPIIVLKTR 223 (792)
Q Consensus 147 P~dg~lLa-SgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~L-asgS-dd~V~IWDlrt~~~~~~~~~~~~h~ 223 (792)
| ++++|+ +++.|++|++||+.+++.+..+.+...+.+++|+|++++| ++++ ++.|++||+++++... .....
T Consensus 83 p-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~----~~~~~ 157 (391)
T 1l0q_A 83 P-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN----TVSVG 157 (391)
T ss_dssp T-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----EEECC
T ss_pred C-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE----EEecC
Confidence 9 777664 5557799999999999999888888889999999999977 5665 5669999998876432 33445
Q ss_pred CCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEEC
Q 036953 224 RSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSI 303 (792)
Q Consensus 224 ~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~S 303 (792)
..+..++|+|+++.+++++... ..+.+|+...+....... +...+..++|+
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~----------------------~~v~~~d~~~~~~~~~~~-------~~~~~~~~~~~ 208 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDS----------------------MSISVIDTVTNSVIDTVK-------VEAAPSGIAVN 208 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT----------------------TEEEEEETTTTEEEEEEE-------CSSEEEEEEEC
T ss_pred CCcceEEECCCCCEEEEEeCCC----------------------CEEEEEECCCCeEEEEEe-------cCCCccceEEC
Confidence 6689999999999887665421 234555555554443332 45578899999
Q ss_pred CCCcEEE
Q 036953 304 DDSRIDL 310 (792)
Q Consensus 304 pDGr~lv 310 (792)
|+|++++
T Consensus 209 ~~g~~l~ 215 (391)
T 1l0q_A 209 PEGTKAY 215 (391)
T ss_dssp TTSSEEE
T ss_pred CCCCEEE
Confidence 9999888
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.80 E-value=1.3e-18 Score=190.21 Aligned_cols=203 Identities=11% Similarity=0.040 Sum_probs=144.7
Q ss_pred eeeeEEeeCC----CceEeecCCCceeec-CCcEEEEEe---CCCeEEEEeccC-CC----cCCCCCCeEEEEEcC---C
Q 036953 43 YVPKRQWVDA----SKLKTCGPSDSSVRD-AKRGLVSWV---EAESLRHLSAKY-CP----LVPPPRSTIAAAFSP---D 106 (792)
Q Consensus 43 ~V~s~aWspd----~~lla~G~~a~sv~d-~~~~L~S~s---~d~sIrvWd~~t-~~----L~gH~~~V~sLafSP---D 106 (792)
.+..++++|+ +.++.++.....++. .+.+++..+ .++.|++|++.. ++ +.+|...++.++|++ +
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 5667777888 666555443222222 345555554 389999999843 43 457888899999999 7
Q ss_pred CCEEEEEECCCeEEEEECCCCcEEEEecCCC---CCcEEEEEccCCCCEE------------EEEeCCCeEEEEECCCCc
Q 036953 107 GRTLASTHGDHTVKIIDCQTGNCLKVLSGHR---RTPWVVRFHPLRSEIL------------ASGSLDHEVRLWDANTSE 171 (792)
Q Consensus 107 G~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~---~~VtsVafSP~dg~lL------------aSgS~DgtVrLWDl~tg~ 171 (792)
+..|++++.|++|+|||+.+++++++|.+|. ..+.+++|+| ++.++ ++|+.|++|++||..+++
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 7999999999999999999999999998754 4677889999 88776 678899999999999999
Q ss_pred EEEEe------ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeE-EEEEccCCCeEEEEEe
Q 036953 172 CIGSC------DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLR-AVHFHPHAAPFVLTAE 243 (792)
Q Consensus 172 ~v~t~------~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVt-sVafSPdG~~LlaS~s 243 (792)
.+..+ .|...+.+..+ ++.++++++ |++|+|||+.+++... .+.+|...+. .++|+|||++|++++.
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~---tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTA---LLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEE---EECCC--CCCCEEEECSSSSEEEEECT
T ss_pred EEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEE---EecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 87765 23334443333 478899988 5569999999988543 3445666544 6899999998877776
Q ss_pred eCccccCC
Q 036953 244 VNDLDSSD 251 (792)
Q Consensus 244 ~~dLrs~d 251 (792)
+..|+.|+
T Consensus 347 D~TIklWd 354 (356)
T 2w18_A 347 DGNIFVYH 354 (356)
T ss_dssp TSCEEEEE
T ss_pred CCcEEEec
Confidence 77666654
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.80 E-value=1.6e-18 Score=189.08 Aligned_cols=211 Identities=12% Similarity=0.060 Sum_probs=146.9
Q ss_pred CCCceEeeeccccee--------eCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC----
Q 036953 22 RRRARNVSRLLAHRE--------ISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---- 89 (792)
Q Consensus 22 ~s~~r~V~~l~~~re--------ls~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---- 89 (792)
..+.+++|+...... +..++..|+.++|+|..... ....+..|++++.|+++++||....
T Consensus 109 ~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~--------~~~d~~~las~s~D~tv~~Wd~~~~~~~~ 180 (393)
T 4gq1_A 109 QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSAD--------NRLAEQVIASVGDDCTLIIWRLTDEGPIL 180 (393)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTT--------CSEEEEEEEEEETTSEEEEEEEETTEEEE
T ss_pred CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccc--------cCCCCCEEEEEECCCeEEEEECCCCceee
Confidence 456788998766533 23467789999998842100 0113457888899999999998654
Q ss_pred CcCCCCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEE-------------------------ecCCCCCcEEE
Q 036953 90 PLVPPPRSTIAAAFSPDG-RTLASTHGDHTVKIIDCQTGNCLKV-------------------------LSGHRRTPWVV 143 (792)
Q Consensus 90 ~L~gH~~~V~sLafSPDG-~~LaSGS~DGtVrIWDl~tgk~v~~-------------------------L~gH~~~VtsV 143 (792)
.+.+|...|.+++|+|++ .+|++++.|++|++||+.+++.... ..+|...|.++
T Consensus 181 ~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v 260 (393)
T 4gq1_A 181 AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANV 260 (393)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEE
T ss_pred eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceee
Confidence 356899999999999976 4899999999999999987754322 23678889999
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCC------------------CeeEEEEcC--CCcEEEEEc-CCe
Q 036953 144 RFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYR------------------PIASIAFHA--EGELLAVAS-GHK 201 (792)
Q Consensus 144 afSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s------------------~V~sVafSp--dG~~LasgS-dd~ 201 (792)
.|++.+++.+++++.|+++++||+..++....+. +.. ......|++ ++.++++++ ++.
T Consensus 261 ~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~ 340 (393)
T 4gq1_A 261 RWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGL 340 (393)
T ss_dssp EEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTE
T ss_pred eeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCE
Confidence 9984489999999999999999998766544331 211 122234443 334566666 556
Q ss_pred EEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 202 LYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 202 V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
|++||+.+++.. .....|..+|++++|+|||+.|++++.
T Consensus 341 V~lwd~~~~~~~---~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 341 IQLINTYEKDSN---SIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp EEEEETTCTTCC---EEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred EEEEECCCCcEE---EEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 999999888754 355678889999999999997766553
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.77 E-value=7.8e-17 Score=177.89 Aligned_cols=198 Identities=15% Similarity=0.115 Sum_probs=155.7
Q ss_pred CeEEEEeccCC---CcCCCCCCeEEEEEcCCCCEEEEEECCC---eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCE
Q 036953 79 ESLRHLSAKYC---PLVPPPRSTIAAAFSPDGRTLASTHGDH---TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEI 152 (792)
Q Consensus 79 ~sIrvWd~~t~---~L~gH~~~V~sLafSPDG~~LaSGS~DG---tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~l 152 (792)
+.|++|+.... .+.+|...|.+++|+|||++|++++.|+ .|++||+.+++.. .+..|.+.+.+++|+| +++.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~ 236 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSK 236 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCE
Confidence 78999998754 3567889999999999999999999885 9999999998865 5667888999999999 8887
Q ss_pred EE-EEeCCCe--EEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcC-C---eEEEEECCCCCcccCCeEEecCCCC
Q 036953 153 LA-SGSLDHE--VRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASG-H---KLYIWPYNNKEEASSPIIVLKTRRS 225 (792)
Q Consensus 153 La-SgS~Dgt--VrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSd-d---~V~IWDlrt~~~~~~~~~~~~h~~s 225 (792)
|+ +++.|+. |++||+.+++......+...+.+++|+|||++|+++++ + .|++||+.+++. .....+...
T Consensus 237 la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~----~~l~~~~~~ 312 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP----QRITWEGSQ 312 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC----EECCCSSSE
T ss_pred EEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE----EEEecCCCc
Confidence 77 6666654 99999999887655567888999999999999888774 3 488889987653 223445677
Q ss_pred eEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCC
Q 036953 226 LRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDD 305 (792)
Q Consensus 226 VtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpD 305 (792)
+..++|+|+|++|++++.... ...+++|+..++....+.. +. .+..+.|+||
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g--------------------~~~i~~~d~~~~~~~~l~~-------~~-~~~~~~~spd 364 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGG--------------------QQHIAKQDLATGGVQVLSS-------TF-LDETPSLAPN 364 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSS--------------------CEEEEEEETTTCCEEECCC-------SS-SCEEEEECTT
T ss_pred ccCeEECCCCCEEEEEECcCC--------------------ceEEEEEECCCCCEEEecC-------CC-CcCCeEEcCC
Confidence 899999999998887775420 1235666666666543322 32 7889999999
Q ss_pred CcEEE
Q 036953 306 SRIDL 310 (792)
Q Consensus 306 Gr~lv 310 (792)
|+.|+
T Consensus 365 g~~l~ 369 (415)
T 2hqs_A 365 GTMVI 369 (415)
T ss_dssp SSEEE
T ss_pred CCEEE
Confidence 99988
No 125
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.76 E-value=4e-17 Score=179.09 Aligned_cols=222 Identities=18% Similarity=0.319 Sum_probs=165.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
+|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++| ++++|++|+.|++|++||+.+++.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcE
Confidence 56778999887 7999999999999999999999999999999999999998 468999999999999999999999
Q ss_pred EEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 173 IGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 173 v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
+..+ .|...|.+++|++ .+|++++ ++.|++||+++.+..........|...|++++| +++.+++++.+..+..+
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 8888 4888999999974 5888887 555999999887754322355678899999999 67777777765544443
Q ss_pred C-----CceeeecCCCc---ccCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEeEECCCCcEEEEcccccc
Q 036953 251 D-----SSMTRATSPGY---LRYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPSVSIDDSRIDLQHASRRA 317 (792)
Q Consensus 251 d-----~~~~l~t~sg~---~~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~~~ 317 (792)
+ ....+....+. ..+. + ..++.+..+..+.+.. ....+.+|...|.++.+ +|++++
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~~-~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~------- 350 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQYR-D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIV------- 350 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEE-T-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEE-------
T ss_pred ECCcCcEEEEEcCCCCcEEEEEeC-C-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEE-------
Confidence 3 22233322221 1111 1 1222323333333333 12245568888999888 788888
Q ss_pred CCCCccccccccccccCCCCCccccccccccccCCC
Q 036953 318 SSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPVI 353 (792)
Q Consensus 318 ~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~~ 353 (792)
+++.|++|.-||...+.
T Consensus 351 -------------------sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 351 -------------------SGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp -------------------EEETTSCEEEEEHHHHT
T ss_pred -------------------EEeCCCcEEEEECCCCC
Confidence 78899999999976653
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.76 E-value=8.2e-17 Score=173.19 Aligned_cols=203 Identities=13% Similarity=0.104 Sum_probs=143.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEE-EEEeCCCeEEEEECCC
Q 036953 91 LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEIL-ASGSLDHEVRLWDANT 169 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lL-aSgS~DgtVrLWDl~t 169 (792)
+..|...|++++|+|||++|++|+.|+ ++|||+.+++....... ..+..+.+.+ +++.+ ++++.|++|++||+.+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLH-RTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECT-TSSEEEEECSSTTEEEEEETTT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcC-CCCEEEEEECCccEEEEEECCC
Confidence 467899999999999999999988775 78999988776655432 2578888988 56665 6677889999999999
Q ss_pred CcEEEEeccCCCeeEEEEcCCCcEEEEEcCCe----------------------------------------EEEEECCC
Q 036953 170 SECIGSCDFYRPIASIAFHAEGELLAVASGHK----------------------------------------LYIWPYNN 209 (792)
Q Consensus 170 g~~v~t~~h~s~V~sVafSpdG~~LasgSdd~----------------------------------------V~IWDlrt 209 (792)
++++..+.+...|.+++|+++. ++++.++. |++||+++
T Consensus 91 ~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~ 168 (355)
T 3vu4_A 91 KQDVSRIKVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQS 168 (355)
T ss_dssp TEEEEEEECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC
T ss_pred CcEEEEEECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCC
Confidence 9999999888899999998763 22233333 55555544
Q ss_pred CCcc------------cC-CeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEec
Q 036953 210 KEEA------------SS-PIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQ 276 (792)
Q Consensus 210 ~~~~------------~~-~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~s 276 (792)
.+.. .. ......|...|++++|+|+|++|++++.+.. .+.+|+..
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~----------------------~v~iwd~~ 226 (355)
T 3vu4_A 169 SGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT----------------------IIRVFKTE 226 (355)
T ss_dssp ------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS----------------------EEEEEETT
T ss_pred CCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC----------------------EEEEEECC
Confidence 3200 00 1234557778888888888876665554432 14455555
Q ss_pred CCCEEEEeeccCcccC-CCceEEEeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccccCC
Q 036953 277 SGDHVSLAAELPLMSS-LPFLIVPSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMETFPV 352 (792)
Q Consensus 277 sG~~~~l~s~l~~l~g-h~~~VwdV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~~~~ 352 (792)
++.++.... .+ |...|.+++|+|||++|+ +++.|++|.-|+...+
T Consensus 227 ~~~~~~~~~-----~g~h~~~v~~~~~s~~~~~l~--------------------------s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 227 DGVLVREFR-----RGLDRADVVDMKWSTDGSKLA--------------------------VVSDKWTLHVFEIFND 272 (355)
T ss_dssp TCCEEEEEE-----CTTCCSCEEEEEECTTSCEEE--------------------------EEETTCEEEEEESSCC
T ss_pred CCcEEEEEE-----cCCCCCcEEEEEECCCCCEEE--------------------------EEECCCEEEEEEccCC
Confidence 555543332 13 889999999999999999 8899999999997655
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.75 E-value=1.2e-16 Score=174.70 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=139.7
Q ss_pred CCCeEEEEEcCC----CCEEEEEEC--------------------CCeEEEEEC-CCCcEEEEecCCCCCcEEEEEcc--
Q 036953 95 PRSTIAAAFSPD----GRTLASTHG--------------------DHTVKIIDC-QTGNCLKVLSGHRRTPWVVRFHP-- 147 (792)
Q Consensus 95 ~~~V~sLafSPD----G~~LaSGS~--------------------DGtVrIWDl-~tgk~v~~L~gH~~~VtsVafSP-- 147 (792)
...|..++|+|| ++++++++. |+.|++|++ .+++.+..+.+|...++.++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 346889999999 888887663 888889988 44777788888888888888887
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEec-c---CCCeeEEEEcCCCcEEE------------EEcCCe-EEEEECCCC
Q 036953 148 LRSEILASGSLDHEVRLWDANTSECIGSCD-F---YRPIASIAFHAEGELLA------------VASGHK-LYIWPYNNK 210 (792)
Q Consensus 148 ~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h---~s~V~sVafSpdG~~La------------sgSdd~-V~IWDlrt~ 210 (792)
.++.+|++++.|++||+||+++++++.++. + ...+.+++|+|+|++++ +++.++ |++||..++
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 466899999999999999999999999985 3 34677889999999874 455444 999999888
Q ss_pred CcccCCeE--EecCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccC
Q 036953 211 EEASSPII--VLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELP 288 (792)
Q Consensus 211 ~~~~~~~~--~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~ 288 (792)
+....... ..+|...+.+.+++ +. ++++++.+ ..+++|+..+|.+++...
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~D----------------------gTIkIWDl~tGk~l~tL~--- 322 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTS----------------------GTIAIWDLLLGQCTALLP--- 322 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETT----------------------SCEEEEETTTCSEEEEEC---
T ss_pred EEEEEEEeeccCCCcceeEccccC--CC-EEEEEcCC----------------------CcEEEEECCCCcEEEEec---
Confidence 75430000 01333334333333 44 33333321 357788888888876654
Q ss_pred cccCCCceEE-EeEECCCCcEEEEccccccCCCCccccccccccccCCCCCccccccccccc
Q 036953 289 LMSSLPFLIV-PSVSIDDSRIDLQHASRRASSSNMQIEPSASLHLQSDSNVEQDGTVPSMET 349 (792)
Q Consensus 289 ~l~gh~~~Vw-dV~~SpDGr~lv~~~~~~~~Sg~v~~~~s~~~q~~~~~sgs~D~tv~p~~~ 349 (792)
+|...++ .++|+|||++|+ +|+.|+||.-||.
T Consensus 323 ---gH~~~vvs~vafSPDG~~La--------------------------SGS~D~TIklWd~ 355 (356)
T 2w18_A 323 ---PVSDQHWSFVKWSGTDSHLL--------------------------AGQKDGNIFVYHY 355 (356)
T ss_dssp ---CC--CCCCEEEECSSSSEEE--------------------------EECTTSCEEEEEE
T ss_pred ---CCCCCeEEEEEECCCCCEEE--------------------------EEECCCcEEEecC
Confidence 3666555 589999999999 8999999999984
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=5.9e-16 Score=170.84 Aligned_cols=237 Identities=12% Similarity=0.056 Sum_probs=170.2
Q ss_pred CceEeeecccc--eeeCCCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC---cCCCCCCe
Q 036953 24 RARNVSRLLAH--REISPKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP---LVPPPRST 98 (792)
Q Consensus 24 ~~r~V~~l~~~--rels~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~---L~gH~~~V 98 (792)
+...+|+.... +.+..+...+...+|+|+++.++.+.. +. ....|++|+..+++ +..|...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~-----~~--------~~~~i~~~d~~tg~~~~l~~~~~~~ 225 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTF-----ES--------GRSALVIQTLANGAVRQVASFPRHN 225 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEEC-----TT--------SSCEEEEEETTTCCEEEEECCSSCE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEe-----cC--------CCcEEEEEECCCCcEEEeecCCCcc
Confidence 46677776543 223334457888899999876654421 10 12478888877653 45788889
Q ss_pred EEEEEcCCCCEEE-EEECCCe--EEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeC-CC--eEEEEECCCCcE
Q 036953 99 IAAAFSPDGRTLA-STHGDHT--VKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSL-DH--EVRLWDANTSEC 172 (792)
Q Consensus 99 ~sLafSPDG~~La-SGS~DGt--VrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~-Dg--tVrLWDl~tg~~ 172 (792)
.+++|+|||++|+ +++.|+. |++||+.+++. ..+..|...+.+++|+| ++++|++++. ++ .|.+||+.+++.
T Consensus 226 ~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 226 GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAP 303 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCC
T ss_pred cCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCE
Confidence 9999999999888 6665554 99999988875 56778999999999999 8888888776 44 688889998876
Q ss_pred EEEeccCCCeeEEEEcCCCcEEEEEcC----CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccc
Q 036953 173 IGSCDFYRPIASIAFHAEGELLAVASG----HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLD 248 (792)
Q Consensus 173 v~t~~h~s~V~sVafSpdG~~LasgSd----d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLr 248 (792)
.....+...+.+++|+|+|++|++++. ..|++||+.+++.. .+..+ ..+.+++|+|+|+.|++++.+..-
T Consensus 304 ~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~----~l~~~-~~~~~~~~spdg~~l~~~s~~~~~- 377 (415)
T 2hqs_A 304 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ----VLSST-FLDETPSLAPNGTMVIYSSSQGMG- 377 (415)
T ss_dssp EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE----ECCCS-SSCEEEEECTTSSEEEEEEEETTE-
T ss_pred EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE----EecCC-CCcCCeEEcCCCCEEEEEEcCCCc-
Confidence 554456678899999999999988873 24999999887642 23333 389999999999988877754310
Q ss_pred cCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCc
Q 036953 249 SSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSR 307 (792)
Q Consensus 249 s~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr 307 (792)
..++++....+.... +.+|...|++++|+|.-.
T Consensus 378 -------------------~~l~~~d~~g~~~~~-------l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 378 -------------------SVLNLVSTDGRFKAR-------LPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp -------------------EEEEEEETTSCCEEE-------CCCSSSEEEEEEECCCCC
T ss_pred -------------------cEEEEEECCCCcEEE-------eeCCCCCCcCCccccccc
Confidence 124555544332222 334889999999999754
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=1.5e-15 Score=152.65 Aligned_cols=252 Identities=12% Similarity=0.061 Sum_probs=167.6
Q ss_pred CCCceEeeecccceeeC--CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC-CC----cCCC
Q 036953 22 RRRARNVSRLLAHREIS--PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY-CP----LVPP 94 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels--~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t-~~----L~gH 94 (792)
..+...+|+....+... .....+..+.|+|++++++++ .++.|.+|+... ++ ...|
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLN-----------------SEGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEE-----------------ETTEEEEEESSSCCSCEECCCTT
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEE-----------------cCCeEEEEeCCCCCCceEecccc
Confidence 45667888876654432 334567888999998766543 145677787766 42 2234
Q ss_pred -CCCeEEEEEcCCCCEEEEEEC--CCeEEEE--ECCCCcEEEEecCCCCCcEEEEEccCCCCEEE-EEeCCCeEEEEEC-
Q 036953 95 -PRSTIAAAFSPDGRTLASTHG--DHTVKII--DCQTGNCLKVLSGHRRTPWVVRFHPLRSEILA-SGSLDHEVRLWDA- 167 (792)
Q Consensus 95 -~~~V~sLafSPDG~~LaSGS~--DGtVrIW--Dl~tgk~v~~L~gH~~~VtsVafSP~dg~lLa-SgS~DgtVrLWDl- 167 (792)
...+.+++|+||+++|++++. ++.++|| ++.+++ ...+..+. .+..++|+| ++++|+ +++.|+.+++|++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEE
T ss_pred ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECC-CCCEEEEEECCCCceEEEEEE
Confidence 367889999999999999983 3445555 555554 44555444 489999999 777666 7889999999985
Q ss_pred -CCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 168 -NTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 168 -~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
.+++......+...+.+++|+|++++|++++ ++.++||+++..... ......+...+..++|+|++++|++++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS--VERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--EEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC--cEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 4555554456778899999999999887765 445888887632211 22344466778999999999988877764
Q ss_pred CccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEE
Q 036953 245 NDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 245 ~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~ 311 (792)
....... ......++++....+....+.. +.+|...++.+.|+|||+.|++
T Consensus 238 ~~~~~~~------------~~~~~~l~~~d~~~~~~~~~~~----~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 238 ADVFDHP------------RDLDVRVQLMDMDGGNVETLFD----LFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp TTCCSCC------------SSEEEEEEEEETTSCSCEEEEE----EEESTTTSCSCCBCTTSSEEEE
T ss_pred CCCCccc------------ccCceEEEEEecCCCCceeeec----cCCCCcccccceECCCCCEEEE
Confidence 3211000 0001235566655555444332 2236677888999999998883
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=5.9e-15 Score=148.34 Aligned_cols=204 Identities=9% Similarity=0.032 Sum_probs=144.3
Q ss_pred eCCCeEEEEeccCC---CcCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC-CcEEEEecCC-CCCcEEEEEccCCC
Q 036953 76 VEAESLRHLSAKYC---PLVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQT-GNCLKVLSGH-RRTPWVVRFHPLRS 150 (792)
Q Consensus 76 s~d~sIrvWd~~t~---~L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~t-gk~v~~L~gH-~~~VtsVafSP~dg 150 (792)
..++.|++|+..++ .+..|...|.+++|+||+++|++++ ++.|++||+.+ ++....+..| ...|.+++|+| ++
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg 96 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-DG 96 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-TS
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-CC
Confidence 35678888888765 3456888999999999999999987 78999999999 8877766666 36789999999 89
Q ss_pred CEEEEEe--CCCeEEE--EECCCCcEEEEeccCCCeeEEEEcCCCcEEE-EEc-CCeEEEEECCCCCcccCCeEEecCCC
Q 036953 151 EILASGS--LDHEVRL--WDANTSECIGSCDFYRPIASIAFHAEGELLA-VAS-GHKLYIWPYNNKEEASSPIIVLKTRR 224 (792)
Q Consensus 151 ~lLaSgS--~DgtVrL--WDl~tg~~v~t~~h~s~V~sVafSpdG~~La-sgS-dd~V~IWDlrt~~~~~~~~~~~~h~~ 224 (792)
++|++++ .++.+++ ||+.+++ ...+.....+..++|+|++++|+ ++. ++.++||+++..... ......+..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC--EEECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc--ceEcccCCC
Confidence 9999998 3344455 5555555 34444445689999999999887 444 566888886432211 223455677
Q ss_pred CeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEec-CCCEEEEeeccCcccCCCceEEEeEEC
Q 036953 225 SLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQ-SGDHVSLAAELPLMSSLPFLIVPSVSI 303 (792)
Q Consensus 225 sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~s-sG~~~~l~s~l~~l~gh~~~VwdV~~S 303 (792)
.+.+++|+|+++.+++++... ....+|... .+.... .+..+...++.+.|+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~----------------------~~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~s 225 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRT----------------------GQMQIWRVRVDGSSVE------RITDSAYGDWFPHPS 225 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTT----------------------SSCEEEEEETTSSCEE------ECCCCSEEEEEEEEC
T ss_pred ccccceECCCCCEEEEEecCC----------------------CCccEEEECCCCCCcE------EEecCCcccCCeEEC
Confidence 899999999999887776421 012222222 222221 122366789999999
Q ss_pred CCCcEEEEc
Q 036953 304 DDSRIDLQH 312 (792)
Q Consensus 304 pDGr~lv~~ 312 (792)
|||++|++.
T Consensus 226 ~dg~~l~~~ 234 (297)
T 2ojh_A 226 PSGDKVVFV 234 (297)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 999998833
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.66 E-value=5.3e-14 Score=147.02 Aligned_cols=203 Identities=12% Similarity=0.040 Sum_probs=147.8
Q ss_pred eCCCeEEEEeccCCCc----CCCC---------CCeEEEEEcCCCCEEEEEE--CCCeEEEEECCCCcEEEEecCCCCCc
Q 036953 76 VEAESLRHLSAKYCPL----VPPP---------RSTIAAAFSPDGRTLASTH--GDHTVKIIDCQTGNCLKVLSGHRRTP 140 (792)
Q Consensus 76 s~d~sIrvWd~~t~~L----~gH~---------~~V~sLafSPDG~~LaSGS--~DGtVrIWDl~tgk~v~~L~gH~~~V 140 (792)
..++.|.+||..+++. ..+. ..+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 187 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS 187 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc
Confidence 3457778887765532 1111 1278999999999888776 47899999999999988887677778
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcc
Q 036953 141 WVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-----FYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEA 213 (792)
Q Consensus 141 tsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-----h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~ 213 (792)
.+++|+| ++++++.++.++.|.+||+.+++.+..+. +...+..++|+|++++|++++ ++.|++||..+++..
T Consensus 188 ~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 188 TGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp CCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred ceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 9999999 88999999999999999999998887764 344678899999999877776 356999999887754
Q ss_pred cCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCC
Q 036953 214 SSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSL 293 (792)
Q Consensus 214 ~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh 293 (792)
. ..... . -..++|+|+|++++++.... ..+.+++..++..+.... .
T Consensus 267 ~---~~~~~-~-~~~~~~s~dg~~l~v~~~~~----------------------~~v~~~d~~~~~~~~~~~-------~ 312 (353)
T 3vgz_A 267 A---KVAAP-E-SLAVLFNPARNEAYVTHRQA----------------------GKVSVIDAKSYKVVKTFD-------T 312 (353)
T ss_dssp E---EEECS-S-CCCEEEETTTTEEEEEETTT----------------------TEEEEEETTTTEEEEEEE-------C
T ss_pred E---EEEcC-C-CceEEECCCCCEEEEEECCC----------------------CeEEEEECCCCeEEEEEe-------c
Confidence 3 11111 2 25689999999877766321 124444544444433322 2
Q ss_pred CceEEEeEECCCCcEEEEcc
Q 036953 294 PFLIVPSVSIDDSRIDLQHA 313 (792)
Q Consensus 294 ~~~VwdV~~SpDGr~lv~~~ 313 (792)
...++.++|+|||+++++..
T Consensus 313 ~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 313 PTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp CSEEEEEEECTTSCEEEEEE
T ss_pred CCCCCeEEEcCCCCEEEEEE
Confidence 34678999999999777443
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.66 E-value=1.7e-14 Score=150.34 Aligned_cols=174 Identities=10% Similarity=0.061 Sum_probs=132.6
Q ss_pred CCcEEEEEeCCCeEEEEeccCCCc----CCCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCcE-EEEecCCCCCcE
Q 036953 68 AKRGLVSWVEAESLRHLSAKYCPL----VPPPRSTIAAAFSPDGRTLASTHG-DHTVKIIDCQTGNC-LKVLSGHRRTPW 141 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~~L----~gH~~~V~sLafSPDG~~LaSGS~-DGtVrIWDl~tgk~-v~~L~gH~~~Vt 141 (792)
.+..+++...++.|++||..++++ ..+...+ .++|+||++++++++. ++.|.+||+.+++. ...+..+..+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 444566667788999999886643 2345556 9999999997777766 88999999999987 777776776666
Q ss_pred EEEEccCCCCEEEEEeCCC---eEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCe-EEEEECCCCCcccC
Q 036953 142 VVRFHPLRSEILASGSLDH---EVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHK-LYIWPYNNKEEASS 215 (792)
Q Consensus 142 sVafSP~dg~lLaSgS~Dg---tVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~-V~IWDlrt~~~~~~ 215 (792)
+++|+| ++++++++..++ .|++||+.+++.+..+.......+++|+|+|++|++++ ++. |++|++........
T Consensus 88 ~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 88 DVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp CEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred ceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 699999 888888554442 89999999999988887777889999999998666554 467 99999986543211
Q ss_pred C-eEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 216 P-IIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 216 ~-~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
. ............++|+|+|+++++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEET
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeC
Confidence 1 122234556899999999998877764
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.65 E-value=6.4e-15 Score=171.77 Aligned_cols=211 Identities=11% Similarity=0.107 Sum_probs=143.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIG 174 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~ 174 (792)
.|.+++|||||++|++++. +.|++||+.+++ ....+..|...+..++|+| |+++|+.++ ++.|++||+.+++...
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 3789999999999999987 899999999873 3456777888999999999 999999887 5699999999987765
Q ss_pred EeccCCC-----------------eeEEEEcCCCcEEEEEc-CC---------------------------------eEE
Q 036953 175 SCDFYRP-----------------IASIAFHAEGELLAVAS-GH---------------------------------KLY 203 (792)
Q Consensus 175 t~~h~s~-----------------V~sVafSpdG~~LasgS-dd---------------------------------~V~ 203 (792)
....... +..++|+|||++|++++ ++ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 5432221 47899999999988876 32 688
Q ss_pred EEECCC-CCcccCCeEEe--cCCCCeEEEEEccCCCeEEEEEe----------eCccccCCCceeeecCC-------Ccc
Q 036953 204 IWPYNN-KEEASSPIIVL--KTRRSLRAVHFHPHAAPFVLTAE----------VNDLDSSDSSMTRATSP-------GYL 263 (792)
Q Consensus 204 IWDlrt-~~~~~~~~~~~--~h~~sVtsVafSPdG~~LlaS~s----------~~dLrs~d~~~~l~t~s-------g~~ 263 (792)
+||+.+ ++... ... .+...+..++| |||+.|++++. .|++........+.... ...
T Consensus 267 ~~d~~~~~~~~~---~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 267 VISPAEQAQTQW---IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EECSSTTCCCEE---ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEECCCCCceEE---ecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 999987 65322 111 35677999999 99998887664 22222222222222111 133
Q ss_pred cCCCCceEEEEecCCCEEEEee-----ccCcccCCCceEEEe-EECCCCcEEEEccc
Q 036953 264 RYPPPAVFVANAQSGDHVSLAA-----ELPLMSSLPFLIVPS-VSIDDSRIDLQHAS 314 (792)
Q Consensus 264 ~~p~~~~~l~~~ssG~~~~l~s-----~l~~l~gh~~~VwdV-~~SpDGr~lv~~~~ 314 (792)
.|.+....++....+...++.. ....+..+...|..+ .|+|||+.|++.+.
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~ 399 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAG 399 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEEC
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEe
Confidence 4444443444444333222221 122344567778887 59999998874443
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.64 E-value=1.8e-15 Score=168.87 Aligned_cols=146 Identities=15% Similarity=0.127 Sum_probs=117.0
Q ss_pred CCCCCeEEEEEcCCCCEEE----EEECCCeEEEEECCCC--------c---EEEEecCCCCCcEEEEEccCCCCEEEEEe
Q 036953 93 PPPRSTIAAAFSPDGRTLA----STHGDHTVKIIDCQTG--------N---CLKVLSGHRRTPWVVRFHPLRSEILASGS 157 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~La----SGS~DGtVrIWDl~tg--------k---~v~~L~gH~~~VtsVafSP~dg~lLaSgS 157 (792)
.+...|.+++|+|++++|+ +|+.|+.|+|||+.++ + .+..+.+|...|++++|+|+++++|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4566799999999999999 7888999999998654 1 24566789999999999994489999999
Q ss_pred CCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEec-------CCCCeEE
Q 036953 158 LDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLK-------TRRSLRA 228 (792)
Q Consensus 158 ~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~-------h~~sVts 228 (792)
.|++|++||+++++.+... .|...|.+++|+|+|++|++++. +.|++||.+ ++... .... |...|.+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~---~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKK---VIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEE---EECCCTTCCTTSCEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccc---cccCCcccCCCCceeEEE
Confidence 9999999999998665443 57889999999999999999984 559999998 33211 1111 2237999
Q ss_pred EEEccCCCeEEEEE
Q 036953 229 VHFHPHAAPFVLTA 242 (792)
Q Consensus 229 VafSPdG~~LlaS~ 242 (792)
++|++++.++++..
T Consensus 246 v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 246 VLWIGTYVFAIVYA 259 (434)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEecCceEEEEEc
Confidence 99999888665544
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.64 E-value=5.8e-15 Score=171.36 Aligned_cols=209 Identities=8% Similarity=-0.008 Sum_probs=147.2
Q ss_pred CCCceEeeecccceeeC---CCCc---eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC---c-
Q 036953 22 RRRARNVSRLLAHREIS---PKTK---YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP---L- 91 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels---~~tk---~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~---L- 91 (792)
..+...+|+....+... .... .+...+|+|+++.++++..... .+....++.+.+|+..+++ +
T Consensus 35 ~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~-------~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP-------IYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC-------CSSSCCCSEEEEEESSSCCCEECC
T ss_pred CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCcc-------ceeecceeeEEEEECCCCceEecc
Confidence 34578899876654322 2222 3788999999997766532111 1112235678888887653 2
Q ss_pred --CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCc------------------EEEEEccCCCC
Q 036953 92 --VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTP------------------WVVRFHPLRSE 151 (792)
Q Consensus 92 --~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~V------------------tsVafSP~dg~ 151 (792)
.+|...+..++|||||++|++++. +.|++||+.+++.......+...+ .+++|+| |++
T Consensus 108 ~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~ 185 (723)
T 1xfd_A 108 PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGT 185 (723)
T ss_dssp CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSS
T ss_pred CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCC
Confidence 234455889999999999999886 789999999988777766555444 7899999 999
Q ss_pred EEEEEeCCC----------------------------------eEEEEECCCCcEEEEec-c------CCCeeEEEEcCC
Q 036953 152 ILASGSLDH----------------------------------EVRLWDANTSECIGSCD-F------YRPIASIAFHAE 190 (792)
Q Consensus 152 lLaSgS~Dg----------------------------------tVrLWDl~tg~~v~t~~-h------~s~V~sVafSpd 190 (792)
.|++++.|+ +|++||+.+++....+. + ...+..++|+||
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 999887653 79999999887644443 2 457889999999
Q ss_pred CcEEEEEcC-----CeEEEEECCCCCcccCCeEEecCCCCe----EEEEEccCCCeEEEE
Q 036953 191 GELLAVASG-----HKLYIWPYNNKEEASSPIIVLKTRRSL----RAVHFHPHAAPFVLT 241 (792)
Q Consensus 191 G~~LasgSd-----d~V~IWDlrt~~~~~~~~~~~~h~~sV----tsVafSPdG~~LlaS 241 (792)
|++|++..+ ..|++||+.+++... .....+...+ ..++|+|||+.|+..
T Consensus 266 g~~l~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 266 TKVAVTWLNRAQNVSILTLCDATTGVCTK--KHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp SEEEEEEEETTSCEEEEEEEETTTCCEEE--EEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred CeEEEEEEcCCCCeEEEEEEeCCCCcceE--EEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 998877642 239999998876432 1112233333 378999999988875
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=1.6e-13 Score=157.73 Aligned_cols=240 Identities=10% Similarity=0.028 Sum_probs=165.2
Q ss_pred CcEEEEEeCCCeEEEEec--cCCCc---CCCCCCeEEEEEcC----CCCEEEEEEC-CCeEEEEECCCCcEEEEecCC--
Q 036953 69 KRGLVSWVEAESLRHLSA--KYCPL---VPPPRSTIAAAFSP----DGRTLASTHG-DHTVKIIDCQTGNCLKVLSGH-- 136 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~--~t~~L---~gH~~~V~sLafSP----DG~~LaSGS~-DGtVrIWDl~tgk~v~~L~gH-- 136 (792)
+..+++.+.+++|++||. .+.+. ..+...+..++|+| ||++|++++. +++|.|||..+++++..+..+
T Consensus 190 g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~ 269 (543)
T 1nir_A 190 GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM 269 (543)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEE
T ss_pred CCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCc
Confidence 345666677788999998 55422 12455689999999 9999999884 899999999999998888642
Q ss_pred --------CC-CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE--EeccCCCeeEEEEcCCCcEEEEEc--CCeEE
Q 036953 137 --------RR-TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIG--SCDFYRPIASIAFHAEGELLAVAS--GHKLY 203 (792)
Q Consensus 137 --------~~-~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~--t~~h~s~V~sVafSpdG~~LasgS--dd~V~ 203 (792)
.. .+..+.++|++..++++...+++|.+||+.+.+.+. .+.+...+.++.|+|+|++|++++ +++|.
T Consensus 270 ~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~ 349 (543)
T 1nir_A 270 TVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVA 349 (543)
T ss_dssp CSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEE
T ss_pred ccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEE
Confidence 23 788999999666777888899999999998865444 556677788999999999877665 56799
Q ss_pred EEECCCCCcccCCeEE--ecCCCCeEEEEEccCCCeEEEEEe-------eCcccc-------CCCceeeecCCC---ccc
Q 036953 204 IWPYNNKEEASSPIIV--LKTRRSLRAVHFHPHAAPFVLTAE-------VNDLDS-------SDSSMTRATSPG---YLR 264 (792)
Q Consensus 204 IWDlrt~~~~~~~~~~--~~h~~sVtsVafSPdG~~LlaS~s-------~~dLrs-------~d~~~~l~t~sg---~~~ 264 (792)
+||..+++... .... ..|......+ ++|++..+++++. +|+++. +....++....+ +..
T Consensus 350 v~D~~tg~l~~-~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 350 VIDSKDRRLSA-LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp EEETTTTEEEE-EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred EEECCCCeEEE-eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEE
Confidence 99999887543 1111 1143333333 5788666666654 344444 332233443322 455
Q ss_pred CCCCceEEEEecC-------CCEEEEeecc------Cc--------ccCCCceEEEeEECCCCcEEE
Q 036953 265 YPPPAVFVANAQS-------GDHVSLAAEL------PL--------MSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 265 ~p~~~~~l~~~ss-------G~~~~l~s~l------~~--------l~gh~~~VwdV~~SpDGr~lv 310 (792)
+.+....+|+... ++.+.++.-. .. +..+..+++.+.|+|||++++
T Consensus 428 ~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 428 THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 6666667777541 2233443310 11 134578999999999999998
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.62 E-value=1.5e-13 Score=142.35 Aligned_cols=203 Identities=10% Similarity=0.052 Sum_probs=131.6
Q ss_pred CCCceEeeecccc---eeeC--CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeC-CCeEEEEecc--CCCc--
Q 036953 22 RRRARNVSRLLAH---REIS--PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVE-AESLRHLSAK--YCPL-- 91 (792)
Q Consensus 22 ~s~~r~V~~l~~~---rels--~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~-d~sIrvWd~~--t~~L-- 91 (792)
..+.+.+|+.... +.+. .....+..++|+|+++.+.+ +.. ++.+++|+.. ++.+
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~----------------~~~~~~~v~~~~~~~~~~~~~~ 76 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYV----------------GVRPEFRVLAYRIAPDDGALTF 76 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEE----------------EETTTTEEEEEEECTTTCCEEE
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEE----------------eecCCCeEEEEEecCCCCceee
Confidence 3566788876421 1111 22334566777777664332 222 2556666654 2221
Q ss_pred ---CCCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECC---CCcEEEEecCCCCCcEEEEEccCCCCEEEEEe-CCCeEE
Q 036953 92 ---VPPPRSTIAAAFSPDGRTLASTHG-DHTVKIIDCQ---TGNCLKVLSGHRRTPWVVRFHPLRSEILASGS-LDHEVR 163 (792)
Q Consensus 92 ---~gH~~~V~sLafSPDG~~LaSGS~-DGtVrIWDl~---tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS-~DgtVr 163 (792)
......+..++|+|++++|++++. ++.|++||+. ..+.+..+..+ ..+.+++|+| +++++++++ .|+.|+
T Consensus 77 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 77 AAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISP-DNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEE
T ss_pred ccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECC-CCCEEEEecCCCCEEE
Confidence 011237889999999998877765 8899999994 34455555544 4588999999 888777777 899999
Q ss_pred EEECCC-CcEEE----E--eccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCC--CCcccCCeEEe--c----CCCCe
Q 036953 164 LWDANT-SECIG----S--CDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNN--KEEASSPIIVL--K----TRRSL 226 (792)
Q Consensus 164 LWDl~t-g~~v~----t--~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt--~~~~~~~~~~~--~----h~~sV 226 (792)
+||+.+ ++... . ......+..++|+|++++|++++ ++.|++||++. ++... ..... . ....+
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-VQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-EEEEECSCTTCCSCCCE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-EeeccccCccccccCCc
Confidence 999987 65432 1 23455788999999999776654 56699999964 22110 01111 1 13457
Q ss_pred EEEEEccCCCeEEEEEe
Q 036953 227 RAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 227 tsVafSPdG~~LlaS~s 243 (792)
..++|+|+|++++++..
T Consensus 234 ~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 234 ADIHITPDGRHLYACDR 250 (343)
T ss_dssp EEEEECTTSSEEEEEET
T ss_pred cceEECCCCCEEEEEec
Confidence 78999999998877663
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=6.6e-14 Score=160.89 Aligned_cols=237 Identities=14% Similarity=0.092 Sum_probs=162.8
Q ss_pred CcEEEEEeCCCeEEEEeccCCCc----C-CCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC--CCCcEEEEecCCCCCcE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCPL----V-PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDC--QTGNCLKVLSGHRRTPW 141 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~L----~-gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl--~tgk~v~~L~gH~~~Vt 141 (792)
+..+++...+++|.+||..++++ . ++. +..++|+|||++|++++.|++|++||+ .+++++..+. +...+.
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~ 225 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEAR 225 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcc
Confidence 34556666788999999887643 2 333 899999999999999999999999999 8888888887 455689
Q ss_pred EEEEccC---CCCEEEEEe-CCCeEEEEECCCCcEEEEecc------------CCCeeEEEEcCCCcEEEEEc--CCeEE
Q 036953 142 VVRFHPL---RSEILASGS-LDHEVRLWDANTSECIGSCDF------------YRPIASIAFHAEGELLAVAS--GHKLY 203 (792)
Q Consensus 142 sVafSP~---dg~lLaSgS-~DgtVrLWDl~tg~~v~t~~h------------~s~V~sVafSpdG~~LasgS--dd~V~ 203 (792)
.++|+|. +++++++++ .+++|.+||..+++++..+.. ...+..+.+++++..++++. ++.|.
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~ 305 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL 305 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEE
Confidence 9999982 556777766 589999999999999888742 23688999999887666554 55699
Q ss_pred EEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe-eCccccCCC-----ceeeec----CCC-cccC-CCC-ce
Q 036953 204 IWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE-VNDLDSSDS-----SMTRAT----SPG-YLRY-PPP-AV 270 (792)
Q Consensus 204 IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s-~~dLrs~d~-----~~~l~t----~sg-~~~~-p~~-~~ 270 (792)
+||+.+.+... .....+...+..+.|+|+|+++++++. ...|..+|. ...+.. ..+ ..++ .+. ..
T Consensus 306 vvd~~~~~~l~--~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~ 383 (543)
T 1nir_A 306 LVNYKDIDNLT--VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGP 383 (543)
T ss_dssp EEECTTSSSCE--EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEE
T ss_pred EEEecCCCcce--eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCcc
Confidence 99998766432 123345667889999999998887765 333333222 122221 111 1111 122 23
Q ss_pred EEEEec-CCCEEEEeec------------cCcccCCCceEEEeEECCCCcEEE
Q 036953 271 FVANAQ-SGDHVSLAAE------------LPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 271 ~l~~~s-sG~~~~l~s~------------l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
.++... .++.+.+..- ...+++|...++.+.++|||++|+
T Consensus 384 ~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~ 436 (543)
T 1nir_A 384 VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 436 (543)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEE
T ss_pred EEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEE
Confidence 223222 2234444431 123445667778899999999998
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=1.9e-13 Score=142.38 Aligned_cols=203 Identities=11% Similarity=0.105 Sum_probs=136.2
Q ss_pred CCCceEeeecccceeeC---CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc-----CC
Q 036953 22 RRRARNVSRLLAHREIS---PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL-----VP 93 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels---~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L-----~g 93 (792)
..+.+.+|+....+... ...... .++|+++++.+. +....++.|.+|+..++++ ..
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~---------------~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVV---------------VTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEE---------------EEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred CCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEE---------------EEeCCCCeEEEEECCCCceeEEeccc
Confidence 45567788766544332 222334 666777665321 1112355677777665543 23
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCC---eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC-EEEEEeCCCe-EEEEECC
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDH---TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE-ILASGSLDHE-VRLWDAN 168 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DG---tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~-lLaSgS~Dgt-VrLWDl~ 168 (792)
+.....+++|+|++++|+++..++ .|.+||+.+++.+..+..+ ..+.+++|+| +++ ++++...++. |.+|++.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECC-CCCEEEEEecCCCceEEEEEEC
Confidence 344444599999999999555553 8999999999988887744 4568999999 776 5555566688 9999987
Q ss_pred CCcEE-----EEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 169 TSECI-----GSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 169 tg~~v-----~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
....+ ..+........++|+|+|++|++++ ++.|++||+.+++... ..........+..++|+|+|++++++
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT-LLNAVGTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE-EEEEEECSSCCCCEEECTTSSEEEEE
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc-eeeeccCCCCCceEEECCCCCEEEEE
Confidence 64332 2234556789999999999766655 5569999998877511 12233345677899999999987766
Q ss_pred Ee
Q 036953 242 AE 243 (792)
Q Consensus 242 ~s 243 (792)
..
T Consensus 239 ~~ 240 (331)
T 3u4y_A 239 TE 240 (331)
T ss_dssp CS
T ss_pred Ec
Confidence 53
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.61 E-value=7e-14 Score=144.90 Aligned_cols=165 Identities=12% Similarity=0.084 Sum_probs=121.5
Q ss_pred eCCCeEEEEecc-CC-----CcCCCCCCeEEEEEcCCCCEEEEEECC-CeEEEEECC--CCc--EEEEecCCCCCcEEEE
Q 036953 76 VEAESLRHLSAK-YC-----PLVPPPRSTIAAAFSPDGRTLASTHGD-HTVKIIDCQ--TGN--CLKVLSGHRRTPWVVR 144 (792)
Q Consensus 76 s~d~sIrvWd~~-t~-----~L~gH~~~V~sLafSPDG~~LaSGS~D-GtVrIWDl~--tgk--~v~~L~gH~~~VtsVa 144 (792)
..++.|++|+.. .+ ....|...+.+++|+|++++|++++.+ +.|++|++. +++ .+..+..+. .+..++
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 90 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIS 90 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEE
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEE
Confidence 567788888774 22 123567788999999999999998886 999999997 554 344555444 789999
Q ss_pred EccCCCCEEEEEe-CCCeEEEEECC---CCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCC-CCcccCC-
Q 036953 145 FHPLRSEILASGS-LDHEVRLWDAN---TSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNN-KEEASSP- 216 (792)
Q Consensus 145 fSP~dg~lLaSgS-~DgtVrLWDl~---tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt-~~~~~~~- 216 (792)
|+| +++++++++ .++.|++||+. ..+.+..+.....+.+++|+|+|++|++++ ++.|++||+.+ ++.....
T Consensus 91 ~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 169 (343)
T 1ri6_A 91 TDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP 169 (343)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred EcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc
Confidence 999 888776665 48899999994 445556666666799999999999887775 56799999987 4321100
Q ss_pred -eEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 217 -IIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 217 -~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
.........+..++|+|+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 170 AEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred cccccCCCCCcceEEECCCCCEEEEEe
Confidence 11222345788999999999887766
No 141
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.61 E-value=2.3e-14 Score=159.92 Aligned_cols=155 Identities=10% Similarity=0.004 Sum_probs=122.0
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---------------CcCCCCCCeEEEEEcCC-
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---------------PLVPPPRSTIAAAFSPD- 106 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---------------~L~gH~~~V~sLafSPD- 106 (792)
.+..++|++++++++.+. .+++.|+.|++|+..+. .+.+|...|.+++|+|+
T Consensus 94 ~v~~l~~spdg~~lav~~------------~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 161 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACM------------MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV 161 (434)
T ss_dssp CEEEEEECTTSCEEEEEE------------EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred cccEEEEcCCCCEEEEEE------------eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC
Confidence 477888888877654110 03346777888876432 24568999999999997
Q ss_pred CCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-c-------
Q 036953 107 GRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-F------- 178 (792)
Q Consensus 107 G~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h------- 178 (792)
+++|++++.||+|+|||+.+++.+....+|...|++++|+| ++++|++|+.|++|++||++ ++....+. +
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTS
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCC
Confidence 89999999999999999999887777778999999999999 89999999999999999998 55555542 1
Q ss_pred CCCeeEEEEcCCCcEEEEEc--CC------eEEEEECCCCC
Q 036953 179 YRPIASIAFHAEGELLAVAS--GH------KLYIWPYNNKE 211 (792)
Q Consensus 179 ~s~V~sVafSpdG~~LasgS--dd------~V~IWDlrt~~ 211 (792)
...+.+++|++++.++++.+ ++ .+++||+++.+
T Consensus 240 ~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 12789999999988886544 21 29999998764
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.60 E-value=2.5e-14 Score=166.84 Aligned_cols=175 Identities=13% Similarity=0.134 Sum_probs=129.8
Q ss_pred eeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC------CcCCCCCCeEEEEEcCCCCEEEEEECCC
Q 036953 44 VPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC------PLVPPPRSTIAAAFSPDGRTLASTHGDH 117 (792)
Q Consensus 44 V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~------~L~gH~~~V~sLafSPDG~~LaSGS~DG 117 (792)
+...+|+|+++.++.+ .. +.|.+|+..++ ++..|...+..++|||||++|++++. +
T Consensus 111 v~~~~~SpDg~~l~~~----------------~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~ 172 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFP----------------LG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-R 172 (741)
T ss_dssp SCCCEECTTSSEEEEE----------------ET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-T
T ss_pred cceeEECCCCCEEEEE----------------eC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-C
Confidence 5667788887765444 21 67888887765 35677788999999999999999885 5
Q ss_pred eEEEEECCCCcEEEEecCCCCC----------------cEEEEEccCCCCEEEEEeCCC---------------------
Q 036953 118 TVKIIDCQTGNCLKVLSGHRRT----------------PWVVRFHPLRSEILASGSLDH--------------------- 160 (792)
Q Consensus 118 tVrIWDl~tgk~v~~L~gH~~~----------------VtsVafSP~dg~lLaSgS~Dg--------------------- 160 (792)
.|++||+.+++.......+... +..+.|+| |+++|++++.|+
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 8999999988766555544332 47899999 999999888765
Q ss_pred ------------eEEEEECCC-CcEEEEe---ccCCCeeEEEEcCCCcEEEEEcC------CeEEEEECCCCCcccCCeE
Q 036953 161 ------------EVRLWDANT-SECIGSC---DFYRPIASIAFHAEGELLAVASG------HKLYIWPYNNKEEASSPII 218 (792)
Q Consensus 161 ------------tVrLWDl~t-g~~v~t~---~h~s~V~sVafSpdG~~LasgSd------d~V~IWDlrt~~~~~~~~~ 218 (792)
.|++||+.+ ++..... .+...+..++| |||++|++++. ..|++||+.+++... .
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~---~ 327 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV---L 327 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE---E
T ss_pred ecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE---E
Confidence 789999998 8766544 35677899999 99999887642 239999998877432 2
Q ss_pred EecCC-C---CeEEEEEccCCCeEEEE
Q 036953 219 VLKTR-R---SLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 219 ~~~h~-~---sVtsVafSPdG~~LlaS 241 (792)
...+. . .+..++|+|||+.++++
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred EEcCCCCcCCcCCceEECCCCeEEEEe
Confidence 22222 2 45688999999944443
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.60 E-value=1.5e-13 Score=142.07 Aligned_cols=165 Identities=15% Similarity=0.126 Sum_probs=122.3
Q ss_pred EEEEEeCCCeEEEEeccCCCcC---CCCC---CeEEEEEcCCCCEEEE-EECCCeEEEEECCCCcEEEEecC-C----CC
Q 036953 71 GLVSWVEAESLRHLSAKYCPLV---PPPR---STIAAAFSPDGRTLAS-THGDHTVKIIDCQTGNCLKVLSG-H----RR 138 (792)
Q Consensus 71 ~L~S~s~d~sIrvWd~~t~~L~---gH~~---~V~sLafSPDG~~LaS-GS~DGtVrIWDl~tgk~v~~L~g-H----~~ 138 (792)
.+++...++.|.+||..++++. .... .+..++|+|++++++. +..++.|.+||+.+++.+..+.. + ..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 5677788899999998766321 1222 4788999999987654 45578999999999998877763 2 22
Q ss_pred CcEEEEEccCCCCEEEEEe------------CCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEE
Q 036953 139 TPWVVRFHPLRSEILASGS------------LDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWP 206 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS------------~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWD 206 (792)
.+.+++|+| ++++++++. .++.|.+||+.+++.+..+.....+..++|+|+|++|+++ ++.|++||
T Consensus 83 ~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d 160 (337)
T 1pby_B 83 SLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMD 160 (337)
T ss_dssp CTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEE
T ss_pred cccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEE
Confidence 678899999 888888876 5799999999999988888767778899999999988888 45699999
Q ss_pred CCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 207 YNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 207 lrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
+.+++... ....+. ....+.|+|+++.++++
T Consensus 161 ~~~~~~~~---~~~~~~-~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 161 PEAGTLVE---DKPIQS-WEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp TTTTEEEE---EECSTT-TTTTTBCCCBCCCCCCC
T ss_pred CCCCcEee---eeeccc-cCCCceeCCCccEEeee
Confidence 98876432 111111 01123678888766543
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.60 E-value=8.2e-15 Score=170.13 Aligned_cols=223 Identities=11% Similarity=0.052 Sum_probs=152.7
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----cCCCCC---CeEEEEEcCCCCEEEEEEC
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----LVPPPR---STIAAAFSPDGRTLASTHG 115 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----L~gH~~---~V~sLafSPDG~~LaSGS~ 115 (792)
....++|+|+++++.. ..+++|++|+..+++ +..|.. .|.+++|||||++|++++.
T Consensus 18 ~~~~~~~spdg~~~~~-----------------~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-----------------EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCCBSSSSCBCCC-----------------CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEES
T ss_pred cccccEEcCCCcEEEE-----------------eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEec
Confidence 3567889999875432 134567777776553 233443 4899999999999999987
Q ss_pred C---------CeEEEEECCCCcEEEEec---CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-CCC-
Q 036953 116 D---------HTVKIIDCQTGNCLKVLS---GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDF-YRP- 181 (792)
Q Consensus 116 D---------GtVrIWDl~tgk~v~~L~---gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h-~s~- 181 (792)
+ +.+++||+.+++. ..+. +|...+..++|+| |++.|+.++. ++|++||+.+++....... ...
T Consensus 81 ~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~ 157 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGV 157 (723)
T ss_dssp CCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTT
T ss_pred CccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCc
Confidence 4 7888999998875 3343 4555688999999 9999999886 7999999999877665532 222
Q ss_pred -----------------eeEEEEcCCCcEEEEEc-CC----------------------------------eEEEEECCC
Q 036953 182 -----------------IASIAFHAEGELLAVAS-GH----------------------------------KLYIWPYNN 209 (792)
Q Consensus 182 -----------------V~sVafSpdG~~LasgS-dd----------------------------------~V~IWDlrt 209 (792)
+.+++|+|||++|++++ ++ .|++||+.+
T Consensus 158 ~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~ 237 (723)
T 1xfd_A 158 IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG 237 (723)
T ss_dssp EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS
T ss_pred eECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC
Confidence 37899999999999876 21 599999987
Q ss_pred CCcccCCeEEec------CCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEE
Q 036953 210 KEEASSPIIVLK------TRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSL 283 (792)
Q Consensus 210 ~~~~~~~~~~~~------h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l 283 (792)
++... .+.. +...+..++|+|||+.+++...... ....+.+|+..++....+
T Consensus 238 ~~~~~---~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-------------------~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 238 PTHDL---EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ-------------------NVSILTLCDATTGVCTKK 295 (723)
T ss_dssp SCCCE---ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS-------------------CEEEEEEEETTTCCEEEE
T ss_pred CceeE---EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC-------------------CeEEEEEEeCCCCcceEE
Confidence 76321 1222 2567899999999996655443210 001345566666665544
Q ss_pred eeccCcccCCCceEE----EeEECCCCcEEEEc
Q 036953 284 AAELPLMSSLPFLIV----PSVSIDDSRIDLQH 312 (792)
Q Consensus 284 ~s~l~~l~gh~~~Vw----dV~~SpDGr~lv~~ 312 (792)
.... +...+. .+.|+|||+.|++.
T Consensus 296 ~~~~-----~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 296 HEDE-----SEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EEEE-----CSSCCCCCCCCCEECTTSCSEEEE
T ss_pred EEec-----cCCEEeccCCCceEcCCCCeEEEE
Confidence 3311 222222 67899999977743
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.58 E-value=1.1e-13 Score=160.76 Aligned_cols=245 Identities=12% Similarity=0.115 Sum_probs=159.5
Q ss_pred CceEeeecccceeeC--CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccC-----CCc----C
Q 036953 24 RARNVSRLLAHREIS--PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKY-----CPL----V 92 (792)
Q Consensus 24 ~~r~V~~l~~~rels--~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t-----~~L----~ 92 (792)
+...+|+....+... .....+...+|+|+++.++.. .++.|.+|+..+ ++. .
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-----------------~~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-----------------RNHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-----------------ETTEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-----------------ECCeEEEEecCcccccCCCcEEecc
Confidence 456677765543322 233456667788887655443 235677777665 421 1
Q ss_pred CCCCC--------------eEEEEEcCCCCEEEEEE---------------------------------CCCeEEEEECC
Q 036953 93 PPPRS--------------TIAAAFSPDGRTLASTH---------------------------------GDHTVKIIDCQ 125 (792)
Q Consensus 93 gH~~~--------------V~sLafSPDG~~LaSGS---------------------------------~DGtVrIWDl~ 125 (792)
.+... +.+++|||||++|++++ .+..|++||+.
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 22222 47899999999999987 45689999999
Q ss_pred CCcEEEEec--CCCCCcEEEEEccCCCCEEEEEeCCC-----eEEEEECCCCcEEEE-ec--cCC---CeeEEEEcC--C
Q 036953 126 TGNCLKVLS--GHRRTPWVVRFHPLRSEILASGSLDH-----EVRLWDANTSECIGS-CD--FYR---PIASIAFHA--E 190 (792)
Q Consensus 126 tgk~v~~L~--gH~~~VtsVafSP~dg~lLaSgS~Dg-----tVrLWDl~tg~~v~t-~~--h~s---~V~sVafSp--d 190 (792)
+++...... .|...+..++|+| |+++|++++.|+ +|++||+.+++.... .. ... .+..+.|+| +
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d 322 (706)
T 2z3z_A 244 TGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN 322 (706)
T ss_dssp TTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS
T ss_pred CCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC
Confidence 887655443 4677899999999 999999888776 899999999843333 32 222 246789999 9
Q ss_pred CcEEEEEcC-CeEEEEECC-CCCcccCCeEEecCCCCeEE-EEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCC
Q 036953 191 GELLAVASG-HKLYIWPYN-NKEEASSPIIVLKTRRSLRA-VHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPP 267 (792)
Q Consensus 191 G~~LasgSd-d~V~IWDlr-t~~~~~~~~~~~~h~~sVts-VafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~ 267 (792)
|++|++++. +.++||++. .++.. ..+..+...+.. ++|+|+++.|++++....-. .
T Consensus 323 g~~l~~~~~~g~~~l~~~~~~~~~~---~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~------------------~ 381 (706)
T 2z3z_A 323 NQFIWQSRRDGWNHLYLYDTTGRLI---RQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL------------------E 381 (706)
T ss_dssp SEEEEEECTTSSCEEEEEETTSCEE---EECCCSSSCEEEEEEECTTSSEEEEEESSSCTT------------------C
T ss_pred CEEEEEEccCCccEEEEEECCCCEE---EecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc------------------e
Confidence 999888874 447777765 33321 233445666776 89999999888877532100 0
Q ss_pred CceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEEcccc
Q 036953 268 PAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQHASR 315 (792)
Q Consensus 268 ~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~~~~~ 315 (792)
..++.+....+....+ . +...+..+.|||||+++++....
T Consensus 382 ~~l~~~d~~~~~~~~l-------~-~~~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDL-------T-PESGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp BEEEEEETTCCCCEES-------C-CSSSEEEEEECTTSSEEEEEEEC
T ss_pred EEEEEEEcCCCCceec-------c-CCCceEEEEECCCCCEEEEEecC
Confidence 1133333333332211 1 44568899999999998844333
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=4.4e-13 Score=141.44 Aligned_cols=164 Identities=9% Similarity=0.097 Sum_probs=111.1
Q ss_pred CCeEEEEeccCCC------cCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCC-Cc--EEEEecC---------CCC
Q 036953 78 AESLRHLSAKYCP------LVPPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQT-GN--CLKVLSG---------HRR 138 (792)
Q Consensus 78 d~sIrvWd~~t~~------L~gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~t-gk--~v~~L~g---------H~~ 138 (792)
++.|.+|+...+. +..+...+..++|+|||++|++++ .++.|.+||+.. ++ .+..+.. +..
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS 141 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence 3456666654332 123566788999999999999888 689999999963 32 2333321 123
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECC-CCcEEEE--e--ccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCC--
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDAN-TSECIGS--C--DFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNN-- 209 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~-tg~~v~t--~--~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt-- 209 (792)
.+.+++|+| +++++++...++.|++||+. +++.... + .....+..++|+|||++|++++ ++.|++|++..
T Consensus 142 ~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 142 HIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 488899999 77777777778999999998 5543322 2 2344678899999999777754 45699999875
Q ss_pred CCcccCCeEEecCC------CCeEEEEEccCCCeEEEEEe
Q 036953 210 KEEASSPIIVLKTR------RSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 210 ~~~~~~~~~~~~h~------~sVtsVafSPdG~~LlaS~s 243 (792)
++... ........ ..+..++|+|||++++++..
T Consensus 221 g~~~~-~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 221 GAFTQ-LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp TEEEE-EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred CceEE-eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 32111 11111111 45889999999998877664
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.53 E-value=4.9e-13 Score=155.21 Aligned_cols=213 Identities=10% Similarity=0.012 Sum_probs=141.8
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC-----C
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANT-----S 170 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~t-----g 170 (792)
..|.+++|+|| ++++.+. |+.|++||+.+++... +..+...+..++|+| |++.|+++ .|+.|++||+.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999999 6666654 5899999999887554 445777889999999 99999885 689999999998 8
Q ss_pred cEEEEecc-CCC--------------eeEEEEcCCCcEEEEEc---------------------------------C-Ce
Q 036953 171 ECIGSCDF-YRP--------------IASIAFHAEGELLAVAS---------------------------------G-HK 201 (792)
Q Consensus 171 ~~v~t~~h-~s~--------------V~sVafSpdG~~LasgS---------------------------------d-d~ 201 (792)
+....... ... +.++.|+|||++|++++ . ..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 77654432 222 48999999999999886 1 23
Q ss_pred EEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee----------CccccCCCceeee--cCC------Ccc
Q 036953 202 LYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV----------NDLDSSDSSMTRA--TSP------GYL 263 (792)
Q Consensus 202 V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~----------~dLrs~d~~~~l~--t~s------g~~ 263 (792)
|++||+.+++... ......+...+..++|+|||+.|+++... |++........+. ... ...
T Consensus 237 l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 237 VGIYHLATGKTVY-LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEETTTTEEEE-CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEECCCCceEe-eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 9999998876432 11112355679999999999988876542 2333321111111 111 123
Q ss_pred cCCC--CceEEEEecCCCEEEEee------ccCcccCCCceEEE-eEECCCCcEEEEccc
Q 036953 264 RYPP--PAVFVANAQSGDHVSLAA------ELPLMSSLPFLIVP-SVSIDDSRIDLQHAS 314 (792)
Q Consensus 264 ~~p~--~~~~l~~~ssG~~~~l~s------~l~~l~gh~~~Vwd-V~~SpDGr~lv~~~~ 314 (792)
.|.+ ...+++....+...++.. ....+..+...+.. +.|+|||+.|++...
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEES
T ss_pred eeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEec
Confidence 4544 445555554443333322 11234456667776 799999998874443
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=2.1e-12 Score=134.87 Aligned_cols=162 Identities=9% Similarity=0.090 Sum_probs=126.9
Q ss_pred CCCeEEEEeccCCC----cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC----CCCCcEEEEEccC
Q 036953 77 EAESLRHLSAKYCP----LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG----HRRTPWVVRFHPL 148 (792)
Q Consensus 77 ~d~sIrvWd~~t~~----L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g----H~~~VtsVafSP~ 148 (792)
.++.|.+||..+++ +..+...+.+++|+|++++|++++.++.|.+||+.+++.+..+.. +...+.+++|+|
T Consensus 162 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~- 240 (353)
T 3vgz_A 162 KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT- 240 (353)
T ss_dssp SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-
T ss_pred CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-
Confidence 46678888876553 223555688999999999999999999999999999998877764 566788999999
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCC
Q 036953 149 RSEILASGS-LDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRS 225 (792)
Q Consensus 149 dg~lLaSgS-~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~s 225 (792)
++++++.++ .++.|.+||+.+++.+..+..... ..++|+|+|++++++. ++.|.+||..+++... .......
T Consensus 241 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~----~~~~~~~ 315 (353)
T 3vgz_A 241 ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK----TFDTPTH 315 (353)
T ss_dssp TTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE----EEECCSE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE----EEecCCC
Confidence 777665555 559999999999998888765443 5799999999766655 5669999998876432 2334457
Q ss_pred eEEEEEccCCCeEEEEEee
Q 036953 226 LRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 226 VtsVafSPdG~~LlaS~s~ 244 (792)
+..++|+|+|++++++...
T Consensus 316 ~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred CCeEEEcCCCCEEEEEEcc
Confidence 8999999999988887764
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=7.5e-13 Score=162.28 Aligned_cols=178 Identities=8% Similarity=-0.006 Sum_probs=142.3
Q ss_pred eeeeEEee-CCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---CcCCCCC-CeEEEEEcCCCCEEEEEECCC
Q 036953 43 YVPKRQWV-DASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---PLVPPPR-STIAAAFSPDGRTLASTHGDH 117 (792)
Q Consensus 43 ~V~s~aWs-pd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---~L~gH~~-~V~sLafSPDG~~LaSGS~DG 117 (792)
.+..+.|+ |+++.++.+ . ++.+.+|+...+ .+..|.. .+..++|+ ||+.|++++.+.
T Consensus 297 ~v~~~~~S~pdG~~la~~----------------~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~ 358 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFV----------------S-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREG 358 (1045)
T ss_dssp GGGEEEEEECGGGCEEEE----------------E-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTE
T ss_pred ccceeeecCCCCCEEEEE----------------E-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCC
Confidence 35667777 776654433 1 456667766544 3456777 89999999 999999999988
Q ss_pred eEE-EEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEE
Q 036953 118 TVK-IIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLA 195 (792)
Q Consensus 118 tVr-IWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~La 195 (792)
.+. +||+.+++.. .+.+|...+..++|+| ++++|++++.++.|++||+.+++....+ .+...+.+++|+|||++|+
T Consensus 359 ~l~~~~d~~~~~~~-~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 359 DFLGIYDYRTGKAE-KFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEEEETTTCCEE-ECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred ceEEEEECCCCCce-EecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 888 9999877654 4448888999999999 9999999999999999999999888777 6788899999999999998
Q ss_pred EEc-CC----------eEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 196 VAS-GH----------KLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 196 sgS-dd----------~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
+++ ++ .|++||+.+++. .....+...+..++|+|||+.|++.+..
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~~----~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRKI----FAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTEE----EECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred EEecCccccccCCCCCeEEEEECCCCcE----EEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 876 33 599999987652 2345567788999999999988877763
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.52 E-value=6.5e-13 Score=138.25 Aligned_cols=143 Identities=13% Similarity=0.089 Sum_probs=108.4
Q ss_pred cCCcEEEEEeCCCeEEEEeccCCCcC---CCCC--CeEEEEEcCCCCEEEE-EECCCeEEEEECCCCcEEEEecCC----
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYCPLV---PPPR--STIAAAFSPDGRTLAS-THGDHTVKIIDCQTGNCLKVLSGH---- 136 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~~L~---gH~~--~V~sLafSPDG~~LaS-GS~DGtVrIWDl~tgk~v~~L~gH---- 136 (792)
.++..+++...++.|.+||..++++. .... .+..++|+|++++++. +..++.|.+||+.+++.+..+..+
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 45556777788999999998766321 1222 5789999999987654 456899999999999888777633
Q ss_pred --CCCcEEEEEccCCCCEEEEEeCC------------CeEEEEECCCCc---EEEEeccCCCeeEEEEcCCCcEEEEEcC
Q 036953 137 --RRTPWVVRFHPLRSEILASGSLD------------HEVRLWDANTSE---CIGSCDFYRPIASIAFHAEGELLAVASG 199 (792)
Q Consensus 137 --~~~VtsVafSP~dg~lLaSgS~D------------gtVrLWDl~tg~---~v~t~~h~s~V~sVafSpdG~~LasgSd 199 (792)
...+.+++|+| +++++++++.+ +.|.+||+.+++ .+..+.+...+.+++|+|+|+ +++++.
T Consensus 89 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~ 166 (349)
T 1jmx_B 89 EVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP 166 (349)
T ss_dssp EEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS
T ss_pred cccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC
Confidence 23378899999 88899888865 899999998843 334455556788999999999 555543
Q ss_pred CeEEEEECCCCCc
Q 036953 200 HKLYIWPYNNKEE 212 (792)
Q Consensus 200 d~V~IWDlrt~~~ 212 (792)
.|++||+.+++.
T Consensus 167 -~i~~~d~~~~~~ 178 (349)
T 1jmx_B 167 -DIYKMDVKTGKY 178 (349)
T ss_dssp -SEEEECTTTCCE
T ss_pred -cEEEEeCCCCce
Confidence 399999988764
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.50 E-value=2.4e-12 Score=132.92 Aligned_cols=136 Identities=16% Similarity=0.112 Sum_probs=93.2
Q ss_pred CCCceEeeecccceeeC--CCCc---eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcC----
Q 036953 22 RRRARNVSRLLAHREIS--PKTK---YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLV---- 92 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels--~~tk---~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~---- 92 (792)
..+...+|+....+.+. .... .+..++|+++++.+ +++...++.|.+|+..+++..
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l---------------~v~~~~~~~v~~~d~~~~~~~~~~~ 73 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIA---------------YATVNKSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEE---------------EEEETTTTEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEE---------------EEEeCCCCeEEEEECCCCCeEeeEE
Confidence 34567788776654433 1122 35666777776532 122233456666766544221
Q ss_pred -CC----CCCeEEEEEcCCCCEEEEEE------------CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEE
Q 036953 93 -PP----PRSTIAAAFSPDGRTLASTH------------GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILAS 155 (792)
Q Consensus 93 -gH----~~~V~sLafSPDG~~LaSGS------------~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaS 155 (792)
++ ...+..++|+|||++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+| ++++|++
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~ 151 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYG 151 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEE
Confidence 11 22577899999999999886 679999999999988877764 45678899999 8887777
Q ss_pred EeCCCeEEEEECCCCcEEEEe
Q 036953 156 GSLDHEVRLWDANTSECIGSC 176 (792)
Q Consensus 156 gS~DgtVrLWDl~tg~~v~t~ 176 (792)
+ ++.|++||+.+++.+..+
T Consensus 152 ~--~~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 152 L--GRDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp E--SSSEEEEETTTTEEEEEE
T ss_pred e--CCeEEEEECCCCcEeeee
Confidence 7 688999999988776555
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.49 E-value=9.2e-13 Score=161.50 Aligned_cols=190 Identities=12% Similarity=0.052 Sum_probs=144.1
Q ss_pred CCCeEEEEEc-CCCCEEEEEECCCeEEEEECCCCcEEEEecCCCC-CcEEEEEccCCCCEEEEEeCCCeEE-EEECCCCc
Q 036953 95 PRSTIAAAFS-PDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRR-TPWVVRFHPLRSEILASGSLDHEVR-LWDANTSE 171 (792)
Q Consensus 95 ~~~V~sLafS-PDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~-~VtsVafSP~dg~lLaSgS~DgtVr-LWDl~tg~ 171 (792)
...+.+++|+ |||++|++++ ++.|.+|++.+++.. .+..|.. .+..++|+ +++.|++++.+..+. +||+.+++
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCC
T ss_pred ccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCC
Confidence 3468999999 9999999988 789999999877644 4667877 89999999 778888888888888 99998887
Q ss_pred EEEEeccCCCeeEEEEcCCCcEEEEEcC-CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCccccC
Q 036953 172 CIGSCDFYRPIASIAFHAEGELLAVASG-HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDSS 250 (792)
Q Consensus 172 ~v~t~~h~s~V~sVafSpdG~~LasgSd-d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~ 250 (792)
......+...+..++|+|||++|++++. +.|++||+.+++... ....+...+..++|+|||++|++++...+...
T Consensus 371 ~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~---~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~- 446 (1045)
T 1k32_A 371 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV---IERSREAMITDFTISDNSRFIAYGFPLKHGET- 446 (1045)
T ss_dssp EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE---EEECSSSCCCCEEECTTSCEEEEEEEECSSTT-
T ss_pred ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEE---eccCCCCCccceEECCCCCeEEEEecCccccc-
Confidence 6555566678999999999999998885 469999998876432 33367788899999999998877765321000
Q ss_pred CCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEEE
Q 036953 251 DSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 251 d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv~ 311 (792)
.......+++|+...+.... +..|...+..+.|+|||+.|++
T Consensus 447 ------------~~~~~~~i~l~d~~~g~~~~-------l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 447 ------------DGYVMQAIHVYDMEGRKIFA-------ATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp ------------CSCCEEEEEEEETTTTEEEE-------CSCSSSBEEEEEECTTSCEEEE
T ss_pred ------------cCCCCCeEEEEECCCCcEEE-------eeCCCcccCCceEcCCCCEEEE
Confidence 00111246667665554222 2236777889999999999883
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.49 E-value=3.4e-12 Score=134.65 Aligned_cols=148 Identities=12% Similarity=0.163 Sum_probs=104.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEEC---CCeEEEEECCCCc--EEEEecCCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEEC
Q 036953 94 PPRSTIAAAFSPDGRTLASTHG---DHTVKIIDCQTGN--CLKVLSGHRRTPWVVRFHPLRSEILASGS-LDHEVRLWDA 167 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~---DGtVrIWDl~tgk--~v~~L~gH~~~VtsVafSP~dg~lLaSgS-~DgtVrLWDl 167 (792)
+...+..++|+|||+ |++++. ++.|++||+.+++ .+..+..+...+..++|+| ++++|++++ .+++|++||+
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEe
Confidence 445677899999999 655554 6899999997765 3445456778899999999 888888877 7899999999
Q ss_pred CC-Cc--EEEEeccC----------CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeE-EecCCCCeEEEEEc
Q 036953 168 NT-SE--CIGSCDFY----------RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPII-VLKTRRSLRAVHFH 232 (792)
Q Consensus 168 ~t-g~--~v~t~~h~----------s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~-~~~h~~sVtsVafS 232 (792)
.. ++ .+..+... ..+.+++|+|+|+++++.. ++.|++||+........... ..........++|+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 63 32 33333221 2488899999999555554 45699999983322210111 12233467889999
Q ss_pred cCCCeEEEEEe
Q 036953 233 PHAAPFVLTAE 243 (792)
Q Consensus 233 PdG~~LlaS~s 243 (792)
|||+++++++.
T Consensus 196 pdg~~l~v~~~ 206 (347)
T 3hfq_A 196 PDGQYAFLAGE 206 (347)
T ss_dssp TTSSEEEEEET
T ss_pred CCCCEEEEEeC
Confidence 99998777653
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.47 E-value=1.2e-13 Score=160.93 Aligned_cols=211 Identities=9% Similarity=0.051 Sum_probs=143.1
Q ss_pred CCceEeeecccceeeCCCCc------eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc---CC
Q 036953 23 RRARNVSRLLAHREISPKTK------YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL---VP 93 (792)
Q Consensus 23 s~~r~V~~l~~~rels~~tk------~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L---~g 93 (792)
.+...+|+....+....... .+...+|+|+++.++.+... ...|..+.++.|++|+..+++. ..
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~-------~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDY-------SKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEE-------EECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecC-------ceeEEeecceEEEEEECCCCcccccee
Confidence 45677888766544332221 27789999999877655210 0111112356799999887765 44
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEe-cCCCCCc-----------------EEEEEccCCCCEEEE
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVL-SGHRRTP-----------------WVVRFHPLRSEILAS 155 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L-~gH~~~V-----------------tsVafSP~dg~lLaS 155 (792)
....+..++|||||++|+++. |+.|++||+.+++..... .++...| .+++|+| |+++|++
T Consensus 108 l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~ 185 (719)
T 1z68_A 108 LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAY 185 (719)
T ss_dssp CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEE
T ss_pred cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEE
Confidence 456789999999999999986 779999999888765433 2333222 4899999 9999999
Q ss_pred EeCCC----------------------------------eEEEEECCCCcEE---EE-----e-ccCCCeeEEEEcCCCc
Q 036953 156 GSLDH----------------------------------EVRLWDANTSECI---GS-----C-DFYRPIASIAFHAEGE 192 (792)
Q Consensus 156 gS~Dg----------------------------------tVrLWDl~tg~~v---~t-----~-~h~s~V~sVafSpdG~ 192 (792)
++.|. +|++||+.+++.. .. + .+...+..++|+||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 88652 7899999987642 21 1 3566789999999988
Q ss_pred EEEEEcC---C--eEEEEE----CCCCCcccCCe-EEecCCCCeE-----EEEEccCCCeEEEEE
Q 036953 193 LLAVASG---H--KLYIWP----YNNKEEASSPI-IVLKTRRSLR-----AVHFHPHAAPFVLTA 242 (792)
Q Consensus 193 ~LasgSd---d--~V~IWD----lrt~~~~~~~~-~~~~h~~sVt-----sVafSPdG~~LlaS~ 242 (792)
++++..+ + .|++|| ..+++...... ....+...+. .+.|+|||+.++...
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 7777442 1 289999 76665433110 0134555565 789999999877643
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.46 E-value=2e-11 Score=129.95 Aligned_cols=179 Identities=11% Similarity=0.022 Sum_probs=125.6
Q ss_pred EEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q 036953 47 RQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----LVPPPRSTIAAAFSPDGRTLASTHGDHTVKII 122 (792)
Q Consensus 47 ~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIW 122 (792)
.+|+|+++.++.... .++.. .|.+|+..++. ..++...+..++|+|||++|+.++.++.|++|
T Consensus 41 ~~~SpDg~~l~~~~~----~~g~~---------~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGA----FDGPW---------NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRV 107 (388)
T ss_dssp CCBCTTSCEEEEEEC----TTSSC---------EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEE
T ss_pred ccCCCCCCEEEEEEc----CCCCc---------eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEE
Confidence 678888876544321 01122 34455554432 23444455567899999999999999999999
Q ss_pred ECCCCcEEEEecCCCCCcEEEEE--ccCCCCEEEEE----------------------eCCCeEEEEECCCCcEEEEecc
Q 036953 123 DCQTGNCLKVLSGHRRTPWVVRF--HPLRSEILASG----------------------SLDHEVRLWDANTSECIGSCDF 178 (792)
Q Consensus 123 Dl~tgk~v~~L~gH~~~VtsVaf--SP~dg~lLaSg----------------------S~DgtVrLWDl~tg~~v~t~~h 178 (792)
|+.+++....+..+...+....| ++ ++++++.. ..+..|.+||+.+++......+
T Consensus 108 d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 186 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE 186 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE
T ss_pred ECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC
Confidence 99999887777767665654444 78 78887743 2346799999999987777777
Q ss_pred CCCeeEEEEcC-CCcEEEEEcCC-------eEEEEECCCCCcccCCeEEecCC--CCeEEEEEccCCCeEEEEEe
Q 036953 179 YRPIASIAFHA-EGELLAVASGH-------KLYIWPYNNKEEASSPIIVLKTR--RSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 179 ~s~V~sVafSp-dG~~LasgSdd-------~V~IWDlrt~~~~~~~~~~~~h~--~sVtsVafSPdG~~LlaS~s 243 (792)
...+..+.|+| ||+.|+....+ .|++||....+.. .+..+. ..+..+.|+|||+.|+..+.
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 187 NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCcccccceECCCCCEEEEEec
Confidence 78899999999 99988876632 4888888665422 222333 35788999999998876544
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.44 E-value=8.4e-12 Score=142.14 Aligned_cols=242 Identities=12% Similarity=0.030 Sum_probs=148.6
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---CcCCCC-CCeEEEEEcCCCCEEEEEEC---
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---PLVPPP-RSTIAAAFSPDGRTLASTHG--- 115 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---~L~gH~-~~V~sLafSPDG~~LaSGS~--- 115 (792)
.+..++|++|++.++.+. ..++++++|+...+ ++..|. ..+..++|+|| +.+++++.
T Consensus 23 ~~~~~~~~~DG~~la~~s---------------~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g 86 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVG---------------FSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKG 86 (582)
T ss_dssp CEEEEEEEETTTEEEEEE---------------EETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTT
T ss_pred chheeecCCCCCeEEEEE---------------ccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCC
Confidence 578888999887665431 12555666665433 344555 57999999999 77777775
Q ss_pred CCeEEEEECCC---CcEEEEecCCCCCcEEEEEccCCCC-EEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCC
Q 036953 116 DHTVKIIDCQT---GNCLKVLSGHRRTPWVVRFHPLRSE-ILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEG 191 (792)
Q Consensus 116 DGtVrIWDl~t---gk~v~~L~gH~~~VtsVafSP~dg~-lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG 191 (792)
+...+||.+.. ++.. .+... ..+...+|+| +++ ++++.+.++.+.+||+.+++......+.. .+++|+|||
T Consensus 87 ~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG 161 (582)
T 3o4h_A 87 AEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRG 161 (582)
T ss_dssp SCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEET
T ss_pred CcceEEEEEeccCCCccc-cccCC-CCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCC
Confidence 45566665433 3322 44322 2355678888 553 44444444555699999988766665444 899999999
Q ss_pred cEEEEEcC-----CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeC--ccccCCC---ce-eeecCC
Q 036953 192 ELLAVASG-----HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVN--DLDSSDS---SM-TRATSP 260 (792)
Q Consensus 192 ~~LasgSd-----d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~--dLrs~d~---~~-~l~t~s 260 (792)
++|++++. ..|++||+.+++. ..+..+...+..++|+|||+.|+.+.... .|..++. .. .+....
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~~----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 237 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGGL----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPS 237 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCCC----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSC
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCCc----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCC
Confidence 99997763 2399999988764 24566778899999999999888444332 2332221 11 111111
Q ss_pred C---ccc--------CCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 261 G---YLR--------YPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 261 g---~~~--------~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
. ... |.+....++....+....+..--.........|.+++|+ ||++++
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~g~~~~~~~~~v~~~~~s-dg~~l~ 297 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFIDGERVEAPQGNHGRVVLW-RGKLVT 297 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEETTEEECCCSSEEEEEEEE-TTEEEE
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEECCeeccCCCceEEEEec-CCEEEE
Confidence 1 122 544443334334444444443101111345678899999 998887
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.43 E-value=5.3e-13 Score=155.48 Aligned_cols=206 Identities=15% Similarity=0.226 Sum_probs=136.3
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCC---CcEEEEEccCCCCEEEEEeC---------CCeEEEEEC
Q 036953 100 AAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRR---TPWVVRFHPLRSEILASGSL---------DHEVRLWDA 167 (792)
Q Consensus 100 sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~---~VtsVafSP~dg~lLaSgS~---------DgtVrLWDl 167 (792)
+++|+|||++++ .+.|++|++||+.+++....+.+|.. .+.+++|+| |+++|++++. |++|++||+
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEEC
Confidence 779999995444 55799999999999998877765543 489999999 9999998876 789999999
Q ss_pred CCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCe-----------------EEEE
Q 036953 168 NTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSL-----------------RAVH 230 (792)
Q Consensus 168 ~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sV-----------------tsVa 230 (792)
.+++.+........+..++|+|||+.|+.+.++.|++||+.+++... ....++...| .+++
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~--l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQ--ITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEE--CCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEE--EecCCCcCCeEcccccceeeeecccCcccEE
Confidence 99876322223456889999999999999998889999998776432 1111122212 4899
Q ss_pred EccCCCeEEEEEeeC-ccccC-----CC---c--eeee-cCCCcccCCCCceEEEEecCCCEE---EEeeccCcccCCCc
Q 036953 231 FHPHAAPFVLTAEVN-DLDSS-----DS---S--MTRA-TSPGYLRYPPPAVFVANAQSGDHV---SLAAELPLMSSLPF 295 (792)
Q Consensus 231 fSPdG~~LlaS~s~~-dLrs~-----d~---~--~~l~-t~sg~~~~p~~~~~l~~~ssG~~~---~l~s~l~~l~gh~~ 295 (792)
|+|||+.|+++..+. .+..+ .. . ..+. ...|. ..+...+.+++...+..+ .+.. ...+.+|..
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~-~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~ 253 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA-KNPVVRIFIIDTTYPAYVGPQEVPV-PAMIASSDY 253 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS-CCCEEEEEEEESSCHHHHCCEECCC-CHHHHTSCE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC-CCCeeEEEEEECCCCCccceeEccC-CccCCCCcc
Confidence 999999888776542 11100 00 0 0000 00000 001113445554443321 2111 012346888
Q ss_pred eEEEeEECCCCcEEEE
Q 036953 296 LIVPSVSIDDSRIDLQ 311 (792)
Q Consensus 296 ~VwdV~~SpDGr~lv~ 311 (792)
.+..+.|||||++++.
T Consensus 254 ~~~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQ 269 (719)
T ss_dssp EEEEEEESSSSEEEEE
T ss_pred eEEEeEEeCCCeEEEE
Confidence 9999999999987773
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.42 E-value=3.2e-12 Score=150.97 Aligned_cols=206 Identities=14% Similarity=0.140 Sum_probs=141.2
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCC-----cEEEEEccCCCCEEEEEeCC---------CeEE
Q 036953 98 TIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRT-----PWVVRFHPLRSEILASGSLD---------HEVR 163 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~-----VtsVafSP~dg~lLaSgS~D---------gtVr 163 (792)
..+++|+|||++++++ |++|++||+.++++...+.+|... ...+.|+| |+++|+.++.+ +.+.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEEE
Confidence 5588999999988886 999999999999988888877643 24478999 99999998876 4567
Q ss_pred EEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCe-----------------
Q 036953 164 LWDANTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSL----------------- 226 (792)
Q Consensus 164 LWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sV----------------- 226 (792)
+||+.+++......+...+..++|||||+.|+.+.++.|++||+.+++... +...++...+
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~--lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR--ITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE--CCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE--EcCCCCccceecCcccccccchhcCCC
Confidence 999999987655556778999999999999999998889999998776432 1111122222
Q ss_pred EEEEEccCCCeEEEEEeeCc-cccCCCc------------eeeec-CCCcccCCCCceEEEEecC---C---CEEEEeec
Q 036953 227 RAVHFHPHAAPFVLTAEVND-LDSSDSS------------MTRAT-SPGYLRYPPPAVFVANAQS---G---DHVSLAAE 286 (792)
Q Consensus 227 tsVafSPdG~~LlaS~s~~d-Lrs~d~~------------~~l~t-~sg~~~~p~~~~~l~~~ss---G---~~~~l~s~ 286 (792)
..+.|+|||+.|+....+.. ++.+... ..+.- ..|.. .+...+.+++... + ..+.+...
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~-~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV-NPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC-CCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc-CCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 35899999998887765332 2211100 00000 01100 0111356667666 5 34444321
Q ss_pred cCcccCCCceEEEeEECCCCcEEE
Q 036953 287 LPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 287 l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
..+.++...+..+.|||||+.++
T Consensus 253 -~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 253 -ASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp -HHHHTSCEEEEEEEEEETTEEEE
T ss_pred -ccCCCCCeEEEEEEEeCCCeEEE
Confidence 11224788999999999999776
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.42 E-value=6.2e-11 Score=125.90 Aligned_cols=147 Identities=10% Similarity=0.171 Sum_probs=100.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEE------ecC--------CCCCcEEEEEccCCCCEEEEEe-
Q 036953 94 PPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKV------LSG--------HRRTPWVVRFHPLRSEILASGS- 157 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~------L~g--------H~~~VtsVafSP~dg~lLaSgS- 157 (792)
+......+++ ++++|++++ .++.|.+|++.....+.. ..+ +...+.+++|+| ++++++.++
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~ 174 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDL 174 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEET
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeC
Confidence 4456778888 888888877 578999999975432211 111 123357899999 888665554
Q ss_pred CCCeEEEEECCCCc-------E-------EEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEe-
Q 036953 158 LDHEVRLWDANTSE-------C-------IGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVL- 220 (792)
Q Consensus 158 ~DgtVrLWDl~tg~-------~-------v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~- 220 (792)
.++.|++|++.... . ............++|+|+|++|++++ ++.|.+||+.+++... .....
T Consensus 175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~-~~~~~~ 253 (361)
T 3scy_A 175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE-IQTVAA 253 (361)
T ss_dssp TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE-EEEEES
T ss_pred CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE-eEEEec
Confidence 58899999887533 1 22234566788999999999887776 5669999998654221 11111
Q ss_pred --cCCCCeEEEEEccCCCeEEEEEee
Q 036953 221 --KTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 221 --~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
.+......++|+|||++|+++...
T Consensus 254 ~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 254 DTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp CSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CCCCCCCcccEEECCCCCEEEEECCC
Confidence 123457899999999988776643
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.40 E-value=1.3e-11 Score=128.32 Aligned_cols=202 Identities=12% Similarity=0.106 Sum_probs=133.2
Q ss_pred CCCceEeeecccceeeCC--CCc--eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc----C-
Q 036953 22 RRRARNVSRLLAHREISP--KTK--YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL----V- 92 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels~--~tk--~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L----~- 92 (792)
..+...+|+....+.+.. ... ....++|+++++.+ +++...++.|.+|+..+++. .
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~---------------~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTA---------------YVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEE---------------EEEETTTTEEEEEETTTTEEEEEEES
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEE---------------EEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 456677887765543321 111 34555666665432 12223456677777665422 1
Q ss_pred CC-----CCCeEEEEEcCCCCEEEEEECC------------CeEEEEECCCCc---EEEEecCCCCCcEEEEEccCCCCE
Q 036953 93 PP-----PRSTIAAAFSPDGRTLASTHGD------------HTVKIIDCQTGN---CLKVLSGHRRTPWVVRFHPLRSEI 152 (792)
Q Consensus 93 gH-----~~~V~sLafSPDG~~LaSGS~D------------GtVrIWDl~tgk---~v~~L~gH~~~VtsVafSP~dg~l 152 (792)
.+ ...+..++|+|||++|++++.+ +.|.+||+.+++ .+..+. +...+.+++|+| +++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCc-
Confidence 12 2237889999999999998865 899999998854 334444 334688999999 777
Q ss_pred EEEEeCCCeEEEEECCCCcEEEEeccCC----------------------------------------------------
Q 036953 153 LASGSLDHEVRLWDANTSECIGSCDFYR---------------------------------------------------- 180 (792)
Q Consensus 153 LaSgS~DgtVrLWDl~tg~~v~t~~h~s---------------------------------------------------- 180 (792)
++.++ +.|++||+.+++.+..+....
T Consensus 161 l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 55544 349999999988776653221
Q ss_pred -----------------CeeEEEEcC-CCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 181 -----------------PIASIAFHA-EGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 181 -----------------~V~sVafSp-dG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
.+..++|+| ++++++++ ++.|++||+.+++... .......+.+++|+|++++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIK----AANLDHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEE----EEECSSCCCEEEECSSSSCEEEES
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEE----EEcCCCCccceEECCCCCEEEEec
Confidence 345677889 99999988 6779999998876432 222344577999999999888754
Q ss_pred eeCccc
Q 036953 243 EVNDLD 248 (792)
Q Consensus 243 s~~dLr 248 (792)
....+.
T Consensus 314 ~~~~v~ 319 (349)
T 1jmx_B 314 TFNDLA 319 (349)
T ss_dssp BSSEEE
T ss_pred CCCeEE
Confidence 433333
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.38 E-value=1.4e-11 Score=145.37 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=122.6
Q ss_pred eeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCC----cCCCCC-----CeEEEEEcCCCCEEEEEE
Q 036953 44 VPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCP----LVPPPR-----STIAAAFSPDGRTLASTH 114 (792)
Q Consensus 44 V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~----L~gH~~-----~V~sLafSPDG~~LaSGS 114 (792)
...+.|++++.++.++ ++.|++|+..+++ +.+|.. ....++|||||++|++++
T Consensus 19 ~~~~~w~~dg~~~~~~------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~ 80 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ------------------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY 80 (740)
T ss_dssp CCCEEECSSSEEEEEE------------------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEE
T ss_pred ccccEECCCCcEEEEc------------------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEE
Confidence 4577888887544322 4667777766542 233332 234589999999999998
Q ss_pred CC---------CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec--cCCCe-
Q 036953 115 GD---------HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD--FYRPI- 182 (792)
Q Consensus 115 ~D---------GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~--h~s~V- 182 (792)
.+ +.+.+||+.+++.. .+..|.+.+..++|+| |++.|+.+. |+.|++||+.+++...... ....+
T Consensus 81 ~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 81 NYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp EEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred CCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCcccee
Confidence 76 56679999998754 4667888999999999 999998884 7899999999887654321 21212
Q ss_pred ----------------eEEEEcCCCcEEEEEc-C-C-----------------------------------eEEEEECCC
Q 036953 183 ----------------ASIAFHAEGELLAVAS-G-H-----------------------------------KLYIWPYNN 209 (792)
Q Consensus 183 ----------------~sVafSpdG~~LasgS-d-d-----------------------------------~V~IWDlrt 209 (792)
..+.|||||++|+..+ + . .|++||+.+
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDS 237 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTS
T ss_pred cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCC
Confidence 3589999999998874 1 1 378889887
Q ss_pred ---CCcccCCeEEe------cCCCCeEEEEEccCCCeEEEE
Q 036953 210 ---KEEASSPIIVL------KTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 210 ---~~~~~~~~~~~------~h~~sVtsVafSPdG~~LlaS 241 (792)
++... ...+. .+...+..++|+|||+.++..
T Consensus 238 ~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 238 LSSVTNAT-SIQITAPASMLIGDHYLCDVTWATQERISLQW 277 (740)
T ss_dssp CCSSSCCC-EEEECCCHHHHTSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCCcce-EEEecCCccCCCCCeEEEEEEEeCCCeEEEEE
Confidence 63211 11122 256678999999999955543
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.38 E-value=4.5e-12 Score=144.40 Aligned_cols=180 Identities=11% Similarity=0.053 Sum_probs=125.5
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCcEEEEecCCC-CCcEEEEEccCCCCEEEEEeC---CCeEEEEECCC
Q 036953 95 PRSTIAAAFSPDGRTLASTHG-DHTVKIIDCQTGNCLKVLSGHR-RTPWVVRFHPLRSEILASGSL---DHEVRLWDANT 169 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSGS~-DGtVrIWDl~tgk~v~~L~gH~-~~VtsVafSP~dg~lLaSgS~---DgtVrLWDl~t 169 (792)
...|++++|+|||++|++++. ||+++||++.+++. ..+..|. ..+..+.|+| | +++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEec
Confidence 446999999999999999887 99999999976655 4455555 6899999999 6 78887775 45556654432
Q ss_pred ---CcEEEEeccCCCeeEEEEcCCCc--EEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 170 ---SECIGSCDFYRPIASIAFHAEGE--LLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 170 ---g~~v~t~~h~s~V~sVafSpdG~--~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
+... .+.....+...+|+|+|+ .+++++++.+.+||+.+++... ...+.. .+++|+|||+.+++++.+
T Consensus 98 ~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~----l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE----LARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE----EEEESS--CEEEEEEETTEEEEEEEE
T ss_pred cCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE----eecCCC--ceEEECCCCCEEEEEEEc
Confidence 2222 443334455678888885 4455556667799998776332 222222 789999999988876654
Q ss_pred CccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 245 NDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 245 ~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
..- ...+++++..++..+.+. +|...+..+.|||||+.|+
T Consensus 171 ~~~-------------------~~~i~~~d~~~g~~~~l~-------~~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 171 GGG-------------------RVSLFTSNLSSGGLRVFD-------SGEGSFSSASISPGMKVTA 210 (582)
T ss_dssp ETT-------------------EEEEEEEETTTCCCEEEC-------CSSCEEEEEEECTTSCEEE
T ss_pred CCC-------------------CeEEEEEcCCCCCceEee-------cCCCccccceECCCCCEEE
Confidence 210 012566665666655443 3778899999999999998
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.34 E-value=1e-10 Score=125.68 Aligned_cols=145 Identities=12% Similarity=0.061 Sum_probs=105.0
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECC-CCcEEEEecC-CCCCcEEEEEccCCCCE--EEEEe-------------C
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQ-TGNCLKVLSG-HRRTPWVVRFHPLRSEI--LASGS-------------L 158 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~-tgk~v~~L~g-H~~~VtsVafSP~dg~l--LaSgS-------------~ 158 (792)
..+..++|+|||++|++++.+ .|.+||+. +++....... ..+.+..++|+| ++++ ++++. .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceeecC
Confidence 457889999999999999988 99999997 7776543321 113366789999 8884 44553 6
Q ss_pred CCeEEEEECC-CCcEEEEec-----cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECC-CCCcccCCeEEe--cCCCCeE
Q 036953 159 DHEVRLWDAN-TSECIGSCD-----FYRPIASIAFHAEGELLAVAS--GHKLYIWPYN-NKEEASSPIIVL--KTRRSLR 227 (792)
Q Consensus 159 DgtVrLWDl~-tg~~v~t~~-----h~s~V~sVafSpdG~~LasgS--dd~V~IWDlr-t~~~~~~~~~~~--~h~~sVt 227 (792)
++++++|++. +++....+. +...+.+++|+|+|++|+++. ++.|++||+. +++... ..... .+...+.
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDHPR 196 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCCEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEecCCCCCCCC
Confidence 8999999997 465544332 456799999999999888775 4569999998 554321 11111 1356789
Q ss_pred EEEEccCCCeEEEEEe
Q 036953 228 AVHFHPHAAPFVLTAE 243 (792)
Q Consensus 228 sVafSPdG~~LlaS~s 243 (792)
.++|+|+|++++++..
T Consensus 197 ~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 197 WVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEECTTSSEEEEEET
T ss_pred EeEECCCCCEEEEEEC
Confidence 9999999998877654
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=9.3e-11 Score=125.98 Aligned_cols=146 Identities=14% Similarity=0.114 Sum_probs=102.0
Q ss_pred eEEEEEcCCCCE--EEEEE-------------CCCeEEEEECC-CCcEEEEec----CCCCCcEEEEEccCCCCEEEEEe
Q 036953 98 TIAAAFSPDGRT--LASTH-------------GDHTVKIIDCQ-TGNCLKVLS----GHRRTPWVVRFHPLRSEILASGS 157 (792)
Q Consensus 98 V~sLafSPDG~~--LaSGS-------------~DGtVrIWDl~-tgk~v~~L~----gH~~~VtsVafSP~dg~lLaSgS 157 (792)
+..++|+|||++ +++++ .++++.+|++. .++....+. .+...+.+++|+| ++++++++.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~ 163 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSAD 163 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEc
Confidence 456899999995 44543 68999999997 466544443 2556799999999 888887765
Q ss_pred C-CCeEEEEECC-CCcEE--EEec---cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCC--CCccc--CCeEEec---
Q 036953 158 L-DHEVRLWDAN-TSECI--GSCD---FYRPIASIAFHAEGELLAVAS--GHKLYIWPYNN--KEEAS--SPIIVLK--- 221 (792)
Q Consensus 158 ~-DgtVrLWDl~-tg~~v--~t~~---h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt--~~~~~--~~~~~~~--- 221 (792)
. ++.|++||+. +++.. ..+. +...+..++|+|+|++|++++ ++.|.+|+++. ++... .......
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 4 6899999998 67653 2332 356789999999999988876 45699998753 33210 0011111
Q ss_pred --CCC------CeEEEE-EccCCCeEEEEEee
Q 036953 222 --TRR------SLRAVH-FHPHAAPFVLTAEV 244 (792)
Q Consensus 222 --h~~------sVtsVa-fSPdG~~LlaS~s~ 244 (792)
+.. .+..++ |+|||++|+++...
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCC
Confidence 111 488999 99999988776643
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.30 E-value=1.6e-09 Score=115.04 Aligned_cols=249 Identities=14% Similarity=0.107 Sum_probs=158.1
Q ss_pred CCceeeeEEeeCCCceEeecCCCceeec---CCcEEEE-----EeCCCeEEEEeccCCCc-----CCCCCCeEEEEEcCC
Q 036953 40 KTKYVPKRQWVDASKLKTCGPSDSSVRD---AKRGLVS-----WVEAESLRHLSAKYCPL-----VPPPRSTIAAAFSPD 106 (792)
Q Consensus 40 ~tk~V~s~aWspd~~lla~G~~a~sv~d---~~~~L~S-----~s~d~sIrvWd~~t~~L-----~gH~~~V~sLafSPD 106 (792)
.-..+..++++++++++.+......+.. ....++. ...++.|.+|+..++++ .++-.....++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 3456888899999887655432211100 0000000 00234566776654432 234557899999999
Q ss_pred CCEEEEEECCCeEEEEECCCCc-EEEEe---------cCCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCcEEEE
Q 036953 107 GRTLASTHGDHTVKIIDCQTGN-CLKVL---------SGHRRTPWVVRFHPLRSEILASGS-LDHEVRLWDANTSECIGS 175 (792)
Q Consensus 107 G~~LaSGS~DGtVrIWDl~tgk-~v~~L---------~gH~~~VtsVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~v~t 175 (792)
|+.+++...++.|++||..... .+..+ .++...+.+++|+|+++.++++.+ .++.|++|| .+++.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888889999999986542 45555 345557899999986678888886 699999999 56777777
Q ss_pred eccC-----------CCeeEEEEcCC-CcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 176 CDFY-----------RPIASIAFHAE-GELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 176 ~~h~-----------s~V~sVafSpd-G~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
+... .....++++++ +.++++.. +++|++||..+++... ......+...+..++|+| +. ++...
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~p-g~-~~~~~ 257 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR-EIKHASFGRNVFAISYIP-GF-LFAVN 257 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-EECCTTTTTCEEEEEEET-TE-EEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEE-EEeccccCCCcceeeecC-CE-EEEeC
Confidence 6421 23789999999 66666555 5569999998666432 111123456788999999 43 33333
Q ss_pred eeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 243 EVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 243 s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
+. +...+ .....++++...+|..+..... ..++-...+.++++|||++++
T Consensus 258 g~--~~v~~-------------~~~~~v~~~~~~~g~~~~~~~~---~~~~~~~p~~ia~~~dG~lyv 307 (329)
T 3fvz_A 258 GK--PYFGD-------------QEPVQGFVMNFSSGEIIDVFKP---VRKHFDMPHDIVASEDGTVYI 307 (329)
T ss_dssp CC--CCTTC-------------SCCCCEEEEETTTCCEEEEECC---SSSCCSSEEEEEECTTSEEEE
T ss_pred CC--EEecc-------------CCCcEEEEEEcCCCeEEEEEcC---CCCccCCeeEEEECCCCCEEE
Confidence 21 11111 1122455666566666555431 133567789999999997777
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.30 E-value=3.4e-10 Score=120.15 Aligned_cols=169 Identities=11% Similarity=0.095 Sum_probs=115.2
Q ss_pred EEEEe-CCCeEEEEeccCC-CcC-----------------CCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCc---
Q 036953 72 LVSWV-EAESLRHLSAKYC-PLV-----------------PPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGN--- 128 (792)
Q Consensus 72 L~S~s-~d~sIrvWd~~t~-~L~-----------------gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk--- 128 (792)
++... .++.+.+|+.... .+. .+...+.+++|+|||++|++++ .++.|++|++....
T Consensus 112 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 112 IVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 44444 5678899987532 111 1122358899999999777665 47899999887543
Q ss_pred ----E------EEEecCCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCcEE--EEec----cCCCeeEEEEcCCC
Q 036953 129 ----C------LKVLSGHRRTPWVVRFHPLRSEILASGS-LDHEVRLWDANTSECI--GSCD----FYRPIASIAFHAEG 191 (792)
Q Consensus 129 ----~------v~~L~gH~~~VtsVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~v--~t~~----h~s~V~sVafSpdG 191 (792)
. ......+...+..++|+| ++++++.++ .+++|.+||+.+++.. ..+. +......++|+|||
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg 270 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDG 270 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTS
T ss_pred cccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCC
Confidence 1 111223456688999999 888777766 6899999999877542 2221 23457899999999
Q ss_pred cEEEEEc-C--CeEEEEECCC--CCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 192 ELLAVAS-G--HKLYIWPYNN--KEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 192 ~~LasgS-d--d~V~IWDlrt--~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
++|+++. + +.|.+|++.. ++.. ..........+..++|+|+|++|++++.
T Consensus 271 ~~l~v~~~~~~~~i~v~~~~~~~g~~~--~~~~~~~g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 271 KYLYASNRLKADGVAIFKVDETNGTLT--KVGYQLTGIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp SEEEEEECSSSCEEEEEEECTTTCCEE--EEEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred CEEEEECCCCCCEEEEEEEcCCCCcEE--EeeEecCCCCCceEEECCCCCEEEEEEC
Confidence 9987766 3 4599999963 3311 1112222456789999999998887774
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.29 E-value=1.4e-10 Score=123.41 Aligned_cols=192 Identities=14% Similarity=0.101 Sum_probs=132.5
Q ss_pred cCCCCCCeEE-----EEEcCCCCEEEEEEC-CC--eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeE
Q 036953 91 LVPPPRSTIA-----AAFSPDGRTLASTHG-DH--TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEV 162 (792)
Q Consensus 91 L~gH~~~V~s-----LafSPDG~~LaSGS~-DG--tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtV 162 (792)
+..|...... .+|+|||++|+.++. ++ .|.+||+.+++......++...+..+.|+| +++.|+.++.++.|
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l 104 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNL 104 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeE
Confidence 3344444554 789999999999987 66 488889999988777777776666788999 99999999999999
Q ss_pred EEEECCCCcEEEEeccC-CCeeEE--EEcCCCcEEEEEc-----------------------CCeEEEEECCCCCcccCC
Q 036953 163 RLWDANTSECIGSCDFY-RPIASI--AFHAEGELLAVAS-----------------------GHKLYIWPYNNKEEASSP 216 (792)
Q Consensus 163 rLWDl~tg~~v~t~~h~-s~V~sV--afSpdG~~LasgS-----------------------dd~V~IWDlrt~~~~~~~ 216 (792)
++||+.+++....+... ..+... .+++++++++... +..|++||+.+++..
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~--- 181 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST--- 181 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE---
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE---
Confidence 99999999877666433 333333 3489999887421 234999999887632
Q ss_pred eEEecCCCCeEEEEEcc-CCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCC-
Q 036953 217 IIVLKTRRSLRAVHFHP-HAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLP- 294 (792)
Q Consensus 217 ~~~~~h~~sVtsVafSP-dG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~- 294 (792)
....+...+..+.|+| ||+.|+.+.... .+. ....+.++....+....+.. ...
T Consensus 182 -~l~~~~~~~~~~~~sp~dg~~l~~~~~~~----~~~-------------~~~~l~~~d~~~~~~~~l~~------~~~~ 237 (388)
T 3pe7_A 182 -VILQENQWLGHPIYRPYDDSTVAFCHEGP----HDL-------------VDARMWLINEDGTNMRKVKT------HAEG 237 (388)
T ss_dssp -EEEEESSCEEEEEEETTEEEEEEEEECSC----TTT-------------SSCSEEEEETTSCCCEESCC------CCTT
T ss_pred -EeecCCccccccEECCCCCCEEEEEEecC----CCC-------------CcceEEEEeCCCCceEEeee------CCCC
Confidence 3445667789999999 999887766421 000 01123333333333333222 122
Q ss_pred ceEEEeEECCCCcEEE
Q 036953 295 FLIVPSVSIDDSRIDL 310 (792)
Q Consensus 295 ~~VwdV~~SpDGr~lv 310 (792)
..+..+.|||||+.|+
T Consensus 238 ~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALV 253 (388)
T ss_dssp EEEEEEEECTTSSCEE
T ss_pred cccccceECCCCCEEE
Confidence 3577889999999776
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.26 E-value=1e-10 Score=124.10 Aligned_cols=183 Identities=9% Similarity=0.039 Sum_probs=120.3
Q ss_pred eeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC---CcCCCCCC-eEEEEEcCCCCEEEEEECCCeE
Q 036953 44 VPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC---PLVPPPRS-TIAAAFSPDGRTLASTHGDHTV 119 (792)
Q Consensus 44 V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~---~L~gH~~~-V~sLafSPDG~~LaSGS~DGtV 119 (792)
+...+|+|+++.++..... ++.. .|.+|+...+ ++..+... ...+.|+|||++|+..+.++.|
T Consensus 38 ~~~~~~SpdG~~l~~~~~~----~g~~---------~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF----DGNR---------NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNL 104 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT----TSSC---------EEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEE
T ss_pred eecCcCCCCCCEEEEEEec----CCCc---------eEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcE
Confidence 5667788888765443111 1222 3444444433 12222222 3347899999999999999999
Q ss_pred EEEECCCCcEEEEecCCCCCcEE-------------------EEEccCCCCEEEEE-----eCCCeEEEEECCCCcEEEE
Q 036953 120 KIIDCQTGNCLKVLSGHRRTPWV-------------------VRFHPLRSEILASG-----SLDHEVRLWDANTSECIGS 175 (792)
Q Consensus 120 rIWDl~tgk~v~~L~gH~~~Vts-------------------VafSP~dg~lLaSg-----S~DgtVrLWDl~tg~~v~t 175 (792)
++||+.+++....+..+...... +.|+| +++.++.. ..+..|.+||+.+++....
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 105 MKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVI 183 (396)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE
T ss_pred EEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEee
Confidence 99999988876666655442222 24566 55554433 3566899999999887777
Q ss_pred eccCCCeeEEEEcC-CCcEEEEEcC-------CeEEEEECCCCCcccCCeEEecC--CCCeEEEEEccCCCeEEEEEee
Q 036953 176 CDFYRPIASIAFHA-EGELLAVASG-------HKLYIWPYNNKEEASSPIIVLKT--RRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 176 ~~h~s~V~sVafSp-dG~~LasgSd-------d~V~IWDlrt~~~~~~~~~~~~h--~~sVtsVafSPdG~~LlaS~s~ 244 (792)
..+...+..+.|+| +++.|+..++ ..|++||+...+.. ....+ ...+..+.|+|+|+.|+.....
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR----KIKEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE----ESSCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee----EeeccCCCccccceEECCCCCEEEEEecC
Confidence 77778899999999 7887766542 24899998765422 12222 2357889999999988776543
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.24 E-value=5.6e-09 Score=107.06 Aligned_cols=142 Identities=11% Similarity=0.164 Sum_probs=102.8
Q ss_pred CCCCCeEEEEEc-CCCCEEEEEEC-CCeEEEEECCCCcEEEEec-CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC
Q 036953 93 PPPRSTIAAAFS-PDGRTLASTHG-DHTVKIIDCQTGNCLKVLS-GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANT 169 (792)
Q Consensus 93 gH~~~V~sLafS-PDG~~LaSGS~-DGtVrIWDl~tgk~v~~L~-gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~t 169 (792)
++...+..++++ ++++.+++... ++.|++|| .+++.+..+. .+...+.++++++ +++++++...++.|.+||..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~- 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN- 150 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-
Confidence 345678999994 67766665543 88999999 5677776664 3446789999999 88888888888999999964
Q ss_pred CcEEEEec---cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEec--CCCCeEEEEEccCCCeEEEE
Q 036953 170 SECIGSCD---FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLK--TRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 170 g~~v~t~~---h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~--h~~sVtsVafSPdG~~LlaS 241 (792)
++.+..+. ....+..++++++|+++++.. ++.|++||..... . ..... +...+..++++++|+.+++.
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~---~~~~~~g~~~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-L---RQIGGEGITNYPIGVGINSNGEILIAD 224 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-E---EEESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE-E---EEEccCCccCCCcEEEECCCCCEEEEe
Confidence 56666663 345689999999999777766 5679999974432 1 11211 23578899999999744433
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.23 E-value=6.7e-09 Score=108.69 Aligned_cols=183 Identities=10% Similarity=0.037 Sum_probs=119.0
Q ss_pred ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCc----CCCCCCeEEEEEcCCCCEEEEEECC-
Q 036953 42 KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPL----VPPPRSTIAAAFSPDGRTLASTHGD- 116 (792)
Q Consensus 42 k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L----~gH~~~V~sLafSPDG~~LaSGS~D- 116 (792)
......+|++++++..+ ...++.|.+|+..++++ ..+...+.+++|+++|+.+++...+
T Consensus 45 ~~~~~~~~~~~g~l~~~----------------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLL----------------DVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp CCEEEEEECTTSCEEEE----------------ETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred ccccCcEECCCCCEEEE----------------ECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC
Confidence 34556666666554322 23445566666554432 1355779999999999988877666
Q ss_pred ---CeEEEEECCCCcEEEEec--CCCCCcEEEEEccCCCCEEEEEeC------CCeEEEEECCCCcEEEEeccCCCeeEE
Q 036953 117 ---HTVKIIDCQTGNCLKVLS--GHRRTPWVVRFHPLRSEILASGSL------DHEVRLWDANTSECIGSCDFYRPIASI 185 (792)
Q Consensus 117 ---GtVrIWDl~tgk~v~~L~--gH~~~VtsVafSP~dg~lLaSgS~------DgtVrLWDl~tg~~v~t~~h~s~V~sV 185 (792)
+.|.+||..+++....+. .+...+.+++++| +++++++... .+.|..||..+++..........+..+
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 187 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGI 187 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccce
Confidence 689999998877554443 3456789999999 8888887654 356777777666554444444567899
Q ss_pred EEcCCCcEEEEEc--CCeEEEEECCCC-CcccCC--eEE--ecCCCCeEEEEEccCCCeEEEE
Q 036953 186 AFHAEGELLAVAS--GHKLYIWPYNNK-EEASSP--IIV--LKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 186 afSpdG~~LasgS--dd~V~IWDlrt~-~~~~~~--~~~--~~h~~sVtsVafSPdG~~LlaS 241 (792)
+|+|+|+.|+++. ++.|++||++.. +..... ... ......+..++++++|+.++++
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEE
Confidence 9999998665554 567999999642 221100 001 1112467889999999855444
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.11 E-value=1.1e-09 Score=126.25 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=101.6
Q ss_pred EEEEc--CCCCE-EEEEEC-CCeEEEEECC--CCcEEEEecC-----CCCCcEEEEEccCCCCEEEEEeCC---------
Q 036953 100 AAAFS--PDGRT-LASTHG-DHTVKIIDCQ--TGNCLKVLSG-----HRRTPWVVRFHPLRSEILASGSLD--------- 159 (792)
Q Consensus 100 sLafS--PDG~~-LaSGS~-DGtVrIWDl~--tgk~v~~L~g-----H~~~VtsVafSP~dg~lLaSgS~D--------- 159 (792)
...|+ |||++ |+.++. +..|.+|++. .......+.. |...+..++|+| |++.|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCc
Confidence 55565 99998 776654 5567777765 2033455655 667789999999 99999988877
Q ss_pred -CeEEEEECCC------CcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CC--------eEEEEECC-CCCcccCCeEE-e
Q 036953 160 -HEVRLWDANT------SECIGSC-DFYRPIASIAFHAEGELLAVAS-GH--------KLYIWPYN-NKEEASSPIIV-L 220 (792)
Q Consensus 160 -gtVrLWDl~t------g~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd--------~V~IWDlr-t~~~~~~~~~~-~ 220 (792)
.+|++||+.+ ++..... .+...+..++|+|||++|+.++ ++ .|++||+. +++... ...+ .
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~-~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD-TRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE-EEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc-cEEeCC
Confidence 5899999998 6665555 5566788899999999998776 32 49999998 452111 1223 3
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe
Q 036953 221 KTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 221 ~h~~sVtsVafSPdG~~LlaS~s 243 (792)
.+...+..+.|+|||+ +++++.
T Consensus 239 ~~~~~~~~~~~spdg~-l~~~~~ 260 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGS-LIVATD 260 (662)
T ss_dssp ETTBCEEEEEECTTSC-EEEEEC
T ss_pred CCCceEcceEECCCCe-EEEEEC
Confidence 3467899999999999 655553
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.08 E-value=1.3e-08 Score=119.37 Aligned_cols=227 Identities=8% Similarity=0.031 Sum_probs=141.1
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcCC---CCCCeEEEEEcCCCCEEEEEECCCe-
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLVP---PPRSTIAAAFSPDGRTLASTHGDHT- 118 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~g---H~~~V~sLafSPDG~~LaSGS~DGt- 118 (792)
.+....|+|+++.++.+. ...+ .+...|++|+..+++... ....+..++|+|||+.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~-----~~~G------~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGL-----SASG------SDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp EEEEEEECTTSSEEEEEE-----EETT------CSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCS
T ss_pred EEEEEEECCCCCEEEEEE-----cCCC------CceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcc
Confidence 466778999988765541 0110 122367778777653211 1112567999999999999988766
Q ss_pred ---------------EEEEECCCCcE--EEEec--CCCCCcEEEEEccCCCCEEEEEeC-----CCeEEEEECCC-----
Q 036953 119 ---------------VKIIDCQTGNC--LKVLS--GHRRTPWVVRFHPLRSEILASGSL-----DHEVRLWDANT----- 169 (792)
Q Consensus 119 ---------------VrIWDl~tgk~--v~~L~--gH~~~VtsVafSP~dg~lLaSgS~-----DgtVrLWDl~t----- 169 (792)
|++|++.+++. ...+. .|...+..+.|+| |+++|+..+. +..|++||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECccccccc
Confidence 99999988762 23333 3566788999999 8888887764 67899999986
Q ss_pred -C--cEEEEeccCCCeeEEEEcCCCcEEEEEcC-----CeEEEEECCCCCcccCCeEEecCCC--CeEEEEEccCCCeEE
Q 036953 170 -S--ECIGSCDFYRPIASIAFHAEGELLAVASG-----HKLYIWPYNNKEEASSPIIVLKTRR--SLRAVHFHPHAAPFV 239 (792)
Q Consensus 170 -g--~~v~t~~h~s~V~sVafSpdG~~LasgSd-----d~V~IWDlrt~~~~~~~~~~~~h~~--sVtsVafSPdG~~Ll 239 (792)
+ .......+...+.. .|+++|+.|+..++ .+|.+||+.+++... ...+..+.. .+..+.|++++. ++
T Consensus 274 ~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-lv 350 (710)
T 2xdw_A 274 TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK-WKVLVPEHEKDVLEWVACVRSNF-LV 350 (710)
T ss_dssp CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCEEEEEEEETTTE-EE
T ss_pred CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-ceeccCCCCCCeEEEEEEEcCCE-EE
Confidence 4 23333344444444 48889987776652 249999998764211 123334433 688899986554 55
Q ss_pred EEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcEEE
Q 036953 240 LTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 240 aS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
++....... .+.++...+|...... ..+...|..+.++|+|..++
T Consensus 351 ~~~~~~g~~--------------------~l~~~~~~~g~~~~~l------~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 351 LCYLHDVKN--------------------TLQLHDLATGALLKIF------PLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp EEEEETTEE--------------------EEEEEETTTCCEEEEE------CCCSSEEEEEECCTTCSEEE
T ss_pred EEEEECCEE--------------------EEEEEECCCCCEEEec------CCCCceEEEEecCCCCCEEE
Confidence 555432100 1222332244432221 12466788888999987666
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.08 E-value=9.6e-09 Score=120.35 Aligned_cols=185 Identities=9% Similarity=-0.030 Sum_probs=124.5
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcC--CCCCCe--EEEEEcCCCCEEEEEECCCe
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLV--PPPRST--IAAAFSPDGRTLASTHGDHT 118 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~--gH~~~V--~sLafSPDG~~LaSGS~DGt 118 (792)
.+...+|+|+++.++... + ..++++..|++|+..+++.. .+...+ ..++|+|||+.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~------~-----~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~ 190 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQ------K-----PNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTD 190 (695)
T ss_dssp EEEEEEECTTSSEEEEEE------E-----ETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCC
T ss_pred EEEEEEECCCCCEEEEEE------C-----CCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCC
Confidence 467788999988765441 1 01234578999999877543 233333 68999999999999998876
Q ss_pred -------------EEEEECCCCc----EEEEecCCCCCcEEEEEccCCCCEEEEEeCCC----eEEEEECCCCcEEEEec
Q 036953 119 -------------VKIIDCQTGN----CLKVLSGHRRTPWVVRFHPLRSEILASGSLDH----EVRLWDANTSECIGSCD 177 (792)
Q Consensus 119 -------------VrIWDl~tgk----~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dg----tVrLWDl~tg~~v~t~~ 177 (792)
|++|++.+++ .+.....|...+..+.|+| |+++|+..+.++ .|.+||..+++......
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 9999998876 3333334667889999999 888888777666 68888876666655555
Q ss_pred cCCCeeEEEEcCCCcEEEEEc----CCeEEEEECCCCCcccCCeEEecC--CCCeEEEEEccCCCeEEEEEe
Q 036953 178 FYRPIASIAFHAEGELLAVAS----GHKLYIWPYNNKEEASSPIIVLKT--RRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 178 h~s~V~sVafSpdG~~LasgS----dd~V~IWDlrt~~~~~~~~~~~~h--~~sVtsVafSPdG~~LlaS~s 243 (792)
+...+....| ++|++++.+. +.+|.+||+.+++... ...+..+ ...+..++|+ + ..++++..
T Consensus 270 ~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~ 337 (695)
T 2bkl_A 270 GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARAS-WKEIVPEDSSASLLSVSIV-G-GHLSLEYL 337 (695)
T ss_dssp CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGG-CEEEECCCSSCEEEEEEEE-T-TEEEEEEE
T ss_pred CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccC-CeEEecCCCCCeEEEEEEE-C-CEEEEEEE
Confidence 5556666666 5666444443 2459999997765311 1223332 4567888888 4 44655554
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.06 E-value=3.1e-08 Score=102.37 Aligned_cols=181 Identities=13% Similarity=0.100 Sum_probs=117.2
Q ss_pred ceeeeEEeeCCCc-eEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC--CcCCCCCCeEEEEEcCCCCEEEEEECCCe
Q 036953 42 KYVPKRQWVDASK-LKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC--PLVPPPRSTIAAAFSPDGRTLASTHGDHT 118 (792)
Q Consensus 42 k~V~s~aWspd~~-lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~--~L~gH~~~V~sLafSPDG~~LaSGS~DGt 118 (792)
......+|+++++ ++ |+...++.|..|+...+ .+..+...+.+++++++|+.+++...++.
T Consensus 28 ~~~eg~~~d~~g~~l~----------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVI----------------FSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRR 91 (296)
T ss_dssp SSEEEEEEEGGGTEEE----------------EEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTE
T ss_pred ccccCCeEeCCCCEEE----------------EEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCe
Confidence 3456677777765 33 23333444555544432 12234567999999999998877777789
Q ss_pred EEEEECCCCcEEEEecCC----CCCcEEEEEccCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEec
Q 036953 119 VKIIDCQTGNCLKVLSGH----RRTPWVVRFHPLRSEILASGSL-----------------DHEVRLWDANTSECIGSCD 177 (792)
Q Consensus 119 VrIWDl~tgk~v~~L~gH----~~~VtsVafSP~dg~lLaSgS~-----------------DgtVrLWDl~tg~~v~t~~ 177 (792)
|.+||..+++........ ...+..++++| +++++++.+. .+.|..+|.. ++......
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR 169 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec
Confidence 999999888755443221 23567899999 8898887321 3456666665 55544445
Q ss_pred cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECC-CCCc-ccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 178 FYRPIASIAFHAEGELLAVAS-GHKLYIWPYN-NKEE-ASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 178 h~s~V~sVafSpdG~~LasgS-dd~V~IWDlr-t~~~-~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
.......++|+|+++.|++.+ ++.|++||+. .++. .. ......+...+..++++++|+.++++
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~-~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQ-GVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEE-EEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCC-CeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 666789999999999885555 4569999997 3332 11 11122234456789999999844443
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.06 E-value=7.1e-09 Score=108.70 Aligned_cols=151 Identities=17% Similarity=0.232 Sum_probs=101.9
Q ss_pred CeEEEEeccCCCcCCCCCCeEEEEEcCCCCEEEEEECC---C--eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEE
Q 036953 79 ESLRHLSAKYCPLVPPPRSTIAAAFSPDGRTLASTHGD---H--TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEIL 153 (792)
Q Consensus 79 ~sIrvWd~~t~~L~gH~~~V~sLafSPDG~~LaSGS~D---G--tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lL 153 (792)
..|.+|+...++...- ..+..++|||||++|+..+.+ + .|.+||+.+++.......+ . +..+.|+| +++.|
T Consensus 43 ~~l~~~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wsp-dg~~l 118 (347)
T 2gop_A 43 NTIVIENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNE-DSRKL 118 (347)
T ss_dssp EEEEEEETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECT-TSSEE
T ss_pred ceEEEEeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECC-CCCEE
Confidence 3456666554421111 457889999999999987754 3 4888898888766555433 3 99999999 88888
Q ss_pred EEEeCC---------------------------CeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcC-------
Q 036953 154 ASGSLD---------------------------HEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASG------- 199 (792)
Q Consensus 154 aSgS~D---------------------------gtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSd------- 199 (792)
+.++.+ ..|.+||+.+++.+..+... .+..+.|+|+| +++++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~ 196 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQY 196 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCS
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccc
Confidence 877642 56999999988773444324 78899999999 7777642
Q ss_pred C-e--EEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 200 H-K--LYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 200 d-~--V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
. . |+++| +++. ..+..+ ..+..+ +|+|+.|++.+..
T Consensus 197 ~~~~~l~~~d--~~~~----~~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 197 FKFWDIYIWE--DGKE----EKMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp SCCEEEEEEE--TTEE----EEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred cccccEEEeC--CCce----EEeccC-cceeeE--CCCCCEEEEEEcc
Confidence 1 3 55566 3332 122223 445544 9999988877643
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.05 E-value=1.9e-08 Score=105.50 Aligned_cols=171 Identities=12% Similarity=0.071 Sum_probs=105.2
Q ss_pred eeeeEEeeCCCceEeecCCCceeec--CCcEEEEEeCCCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEECC-
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRD--AKRGLVSWVEAESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTHGD- 116 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d--~~~~L~S~s~d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS~D- 116 (792)
.+....|+|+++.++.... .. +... |.+|+...++ +..+.. +..++|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~----~~~~~~~~---------l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~ 125 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRA----NEEKKVSE---------IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKR 125 (347)
T ss_dssp SCEEEEECTTSSEEEEEEE----ETTTTEEE---------EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECC
T ss_pred cCCCeEECCCCCEEEEEEe----ccCCCcce---------EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccC
Confidence 4566789999887655310 01 1122 3333433221 222233 8999999999999888642
Q ss_pred --------------------------CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCC-------eEE
Q 036953 117 --------------------------HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDH-------EVR 163 (792)
Q Consensus 117 --------------------------GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dg-------tVr 163 (792)
..|++||+.+++.+..+.. . .+..+.|+| ++ +++++..+. ...
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~ 201 (347)
T 2gop_A 126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWD 201 (347)
T ss_dssp CC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEE
T ss_pred CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEeccccccccccccc
Confidence 5799999998876455554 4 889999999 77 888776542 344
Q ss_pred EEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc-C--------CeEEEEECCCCCcccCCeEEe-cCCCCeEE-EEEc
Q 036953 164 LWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS-G--------HKLYIWPYNNKEEASSPIIVL-KTRRSLRA-VHFH 232 (792)
Q Consensus 164 LWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS-d--------d~V~IWDlrt~~~~~~~~~~~-~h~~sVts-VafS 232 (792)
+|.+.+++......+ ..+..+ +|+|++|+..+ + ..|++|| +++. .... .+...+.. +.|+
T Consensus 202 l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~----~~l~~~~~~~~~~~~~~s 272 (347)
T 2gop_A 202 IYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV----MGILDEVDRGVGQAKIKD 272 (347)
T ss_dssp EEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE----EESSTTCCSEEEEEEEET
T ss_pred EEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce----EeccccCCcccCCccEEc
Confidence 444435554443344 444444 99999887765 2 2488888 3331 1222 34567776 8999
Q ss_pred cCCCeEEEEEe
Q 036953 233 PHAAPFVLTAE 243 (792)
Q Consensus 233 PdG~~LlaS~s 243 (792)
++ +++++.
T Consensus 273 -dg--~~~~~~ 280 (347)
T 2gop_A 273 -GK--VYFTLF 280 (347)
T ss_dssp -TE--EEEEEE
T ss_pred -Cc--EEEEEe
Confidence 87 444443
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.04 E-value=3.6e-08 Score=103.13 Aligned_cols=145 Identities=10% Similarity=0.088 Sum_probs=109.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCC----CeEEEEECC
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLD----HEVRLWDAN 168 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~D----gtVrLWDl~ 168 (792)
.+...+.+++|+++++.++++..++.|.+||..+++....+..+...+.+++|++ +++++++...+ +.|.+||..
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTT
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCC
Confidence 4556689999999999888888899999999988876655545677899999999 88888877766 689999998
Q ss_pred CCcEEEEec---cCCCeeEEEEcCCCcEEEEEcC-------CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeE
Q 036953 169 TSECIGSCD---FYRPIASIAFHAEGELLAVASG-------HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPF 238 (792)
Q Consensus 169 tg~~v~t~~---h~s~V~sVafSpdG~~LasgSd-------d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~L 238 (792)
+++....+. ....+.+++++|+|+++++... ..|+.||....+.. ........+..++|+|+++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT----PIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE----EEEEEESSEEEEEECTTSSEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE----EeecCCCcccceEECCCCCEE
Confidence 877653332 3457899999999998887763 34777776544322 122233457899999999977
Q ss_pred EEEE
Q 036953 239 VLTA 242 (792)
Q Consensus 239 laS~ 242 (792)
+++.
T Consensus 197 ~v~~ 200 (333)
T 2dg1_A 197 WVTE 200 (333)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6655
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.04 E-value=3.6e-09 Score=121.78 Aligned_cols=194 Identities=9% Similarity=-0.031 Sum_probs=132.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEE--ECCCeEEEEECCCCcEEEEecCCCCCcE---------EEEEc--cCCCCE-EEEE
Q 036953 91 LVPPPRSTIAAAFSPDGRTLAST--HGDHTVKIIDCQTGNCLKVLSGHRRTPW---------VVRFH--PLRSEI-LASG 156 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~LaSG--S~DGtVrIWDl~tgk~v~~L~gH~~~Vt---------sVafS--P~dg~l-LaSg 156 (792)
+.+|...+..++|+++...+++. +.++...||....+.....+..|...+. ...|+ | |++. |+..
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~ 97 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLVFT 97 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEEEE
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEEEE
Confidence 45688899999999876666766 5588999999655555677777776666 66676 8 7776 6655
Q ss_pred eC-CCeEEEEECC--C-CcEEEEec-----cCCCeeEEEEcCCCcEEEEEcCC-----------eEEEEECCC------C
Q 036953 157 SL-DHEVRLWDAN--T-SECIGSCD-----FYRPIASIAFHAEGELLAVASGH-----------KLYIWPYNN------K 210 (792)
Q Consensus 157 S~-DgtVrLWDl~--t-g~~v~t~~-----h~s~V~sVafSpdG~~LasgSdd-----------~V~IWDlrt------~ 210 (792)
+. +..|.+||+. . ++...... +...+..++|+|||+.|+.++.+ .|++||+.+ +
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred ECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 43 5677777876 3 54433333 45568899999999999888743 499999987 3
Q ss_pred CcccCCeEEe-cCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEec-CC---CEEEEee
Q 036953 211 EEASSPIIVL-KTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQ-SG---DHVSLAA 285 (792)
Q Consensus 211 ~~~~~~~~~~-~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~s-sG---~~~~l~s 285 (792)
+. ..+. .+...+..++|+|||+.|+.+..+..... |....+.++... +| ....+..
T Consensus 178 ~~----~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~---------------~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 178 AV----RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP---------------WEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp GS----EESSCSCSSEECCCEECTTSSEEEEEEECTTCCT---------------TTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred ce----eEEEecCCCcccCceECCCCCEEEEEECCCCCCC---------------CCCcEEEEEEECCCCcccccEEeCC
Confidence 32 2334 45567888999999998887775432111 111235566655 34 3333332
Q ss_pred ccCcccCCCceEEEeEECCCCcEEE
Q 036953 286 ELPLMSSLPFLIVPSVSIDDSRIDL 310 (792)
Q Consensus 286 ~l~~l~gh~~~VwdV~~SpDGr~lv 310 (792)
++...+..+.|+|||++++
T Consensus 239 ------~~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 239 ------GPEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp ------ETTBCEEEEEECTTSCEEE
T ss_pred ------CCCceEcceEECCCCeEEE
Confidence 2567889999999999554
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.98 E-value=1.3e-07 Score=109.75 Aligned_cols=238 Identities=12% Similarity=0.051 Sum_probs=152.7
Q ss_pred EEEEEeCCCeEEEEeccCCCcC---CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC--CCcEEEEecCCCCCcEEEEE
Q 036953 71 GLVSWVEAESLRHLSAKYCPLV---PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQ--TGNCLKVLSGHRRTPWVVRF 145 (792)
Q Consensus 71 ~L~S~s~d~sIrvWd~~t~~L~---gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~--tgk~v~~L~gH~~~VtsVaf 145 (792)
.+++...++.+.++|..++++. .....+..+.|+|||+++++++.|+.|.+||+. +++.+..+... .....++|
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~ 247 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIET 247 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEE
Confidence 4455557889999998876432 234467899999999999999999999999996 78888887743 34678999
Q ss_pred c----cCCCCEEEEEe-CCCeEEEEECCCCcEEEEeccC-----------------------------------------
Q 036953 146 H----PLRSEILASGS-LDHEVRLWDANTSECIGSCDFY----------------------------------------- 179 (792)
Q Consensus 146 S----P~dg~lLaSgS-~DgtVrLWDl~tg~~v~t~~h~----------------------------------------- 179 (792)
+ | ++++++.+. .+++|.++|..+.+++..+...
T Consensus 248 s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd 326 (567)
T 1qks_A 248 SKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 326 (567)
T ss_dssp CCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred ccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 9 7 777777665 5699999999888777664210
Q ss_pred ---------------CCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEE---ecCCCCeEEEEEccCCCeEE
Q 036953 180 ---------------RPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIV---LKTRRSLRAVHFHPHAAPFV 239 (792)
Q Consensus 180 ---------------s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~---~~h~~sVtsVafSPdG~~Ll 239 (792)
....++.|+|+|++|+++. +++|.++|+.+.+... .... ..|...-..+ ++|++..+.
T Consensus 327 ~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~-~i~vgg~~Phpg~g~~~-~~p~~g~v~ 404 (567)
T 1qks_A 327 YTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA-IEDTGGQTPHPGRGANF-VHPTFGPVW 404 (567)
T ss_dssp TTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE-EEECSSSSBCCTTCEEE-EETTTEEEE
T ss_pred cCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE-EEeccCcCCCCccceee-ECCCCCcEE
Confidence 0122567999999988776 5779999999887543 1111 1132212122 688866676
Q ss_pred EEEeeC--cc-----cc-------CCCceeeecCCC---cccCCCCceEEEEecCC-------CEEEEee--cc------
Q 036953 240 LTAEVN--DL-----DS-------SDSSMTRATSPG---YLRYPPPAVFVANAQSG-------DHVSLAA--EL------ 287 (792)
Q Consensus 240 aS~s~~--dL-----rs-------~d~~~~l~t~sg---~~~~p~~~~~l~~~ssG-------~~~~l~s--~l------ 287 (792)
++.... .| +. |.....+....+ +.+..+...++|+.... +.+.+.. .+
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~ 484 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSD 484 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSC
T ss_pred EeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccC
Confidence 665422 22 22 222223333221 34455666667775521 1233333 11
Q ss_pred ---Ccc--------cCCCceEEEeEECCCCcEEEEc
Q 036953 288 ---PLM--------SSLPFLIVPSVSIDDSRIDLQH 312 (792)
Q Consensus 288 ---~~l--------~gh~~~VwdV~~SpDGr~lv~~ 312 (792)
..+ .....+++.+.|++||+++.++
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 485 PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEE
T ss_pred CCcEEeccccccccCCCCcceEeeeECCCCCEEEEE
Confidence 011 1124589999999999998844
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.97 E-value=6.6e-08 Score=102.90 Aligned_cols=167 Identities=10% Similarity=-0.020 Sum_probs=121.8
Q ss_pred EEEEE-eCCCeEEEEeccCCCcC---CCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCC-----CCc
Q 036953 71 GLVSW-VEAESLRHLSAKYCPLV---PPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHR-----RTP 140 (792)
Q Consensus 71 ~L~S~-s~d~sIrvWd~~t~~L~---gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~-----~~V 140 (792)
++|.. ..++.|.+||..+.++. ........+++++++ .++++. .++.|.+||..+++....+.... ...
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 34444 44678999998876542 234678899999888 455555 88999999999998877776332 145
Q ss_pred EEEEEccCCCCEEEEEe-CCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcC-----------CeEEEEECC
Q 036953 141 WVVRFHPLRSEILASGS-LDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASG-----------HKLYIWPYN 208 (792)
Q Consensus 141 tsVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSd-----------d~V~IWDlr 208 (792)
..+++ . ++.++++.. .+++|.+||+.+++.+..+........+.++++|++++++.. +.|.+||..
T Consensus 134 ~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 134 EQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred ceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 67777 3 556666554 589999999999998888876666788999999998777664 469999998
Q ss_pred CCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 209 NKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 209 t~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
+.+... ............++|+|+++.++++.
T Consensus 212 t~~v~~--~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 212 TFTVEK--QFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp TTEEEE--EEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CCeEEE--EEecCCCCCceeEEEecCCCEEEEEc
Confidence 876432 11122234688999999999887754
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.96 E-value=5.5e-08 Score=99.61 Aligned_cols=171 Identities=15% Similarity=0.158 Sum_probs=120.6
Q ss_pred CCcEEEEEeC--CCeEEEEeccCCC---c-CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec--CCCCC
Q 036953 68 AKRGLVSWVE--AESLRHLSAKYCP---L-VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS--GHRRT 139 (792)
Q Consensus 68 ~~~~L~S~s~--d~sIrvWd~~t~~---L-~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~--gH~~~ 139 (792)
.+..+|.... ++.|.+|+..... + ..+...+.+++++++|+.+++...++.|++||.. ++.+..+. ++...
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEF 165 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSS
T ss_pred CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCC
Confidence 4556666653 6788888843321 1 1344578999999999988877788999999964 56666664 45567
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecc---CCCeeEEEEcCCCcEEEEEc-CC-eEEEEECCCCCccc
Q 036953 140 PWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDF---YRPIASIAFHAEGELLAVAS-GH-KLYIWPYNNKEEAS 214 (792)
Q Consensus 140 VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h---~s~V~sVafSpdG~~LasgS-dd-~V~IWDlrt~~~~~ 214 (792)
+.++++++ +++++++...++.|++||. +++.+..+.. ...+..++++++|+++++.. ++ .|++||... +...
T Consensus 166 p~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~ 242 (286)
T 1q7f_A 166 PNGVVVND-KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLIS 242 (286)
T ss_dssp EEEEEECS-SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEE
T ss_pred cEEEEECC-CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEE
Confidence 89999999 8888888888999999997 4566666643 25789999999999888876 44 799999643 3221
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 215 SPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 215 ~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
..........+..++|+|+|+ ++++..+
T Consensus 243 -~~~~~~~~~~~~~i~~~~~g~-l~vs~~~ 270 (286)
T 1q7f_A 243 -ALESKVKHAQCFDVALMDDGS-VVLASKD 270 (286)
T ss_dssp -EEEESSCCSCEEEEEEETTTE-EEEEETT
T ss_pred -EEcccCCCCcceeEEECCCCc-EEEECCC
Confidence 111111233478999999997 5555433
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.95 E-value=3e-08 Score=107.46 Aligned_cols=95 Identities=9% Similarity=0.079 Sum_probs=72.3
Q ss_pred CCeEEEEeccCCCc----CCCCCCeEEEEEcCCCCEEEEEEC----------CCeEEEEECCCCcEEEEecC------CC
Q 036953 78 AESLRHLSAKYCPL----VPPPRSTIAAAFSPDGRTLASTHG----------DHTVKIIDCQTGNCLKVLSG------HR 137 (792)
Q Consensus 78 d~sIrvWd~~t~~L----~gH~~~V~sLafSPDG~~LaSGS~----------DGtVrIWDl~tgk~v~~L~g------H~ 137 (792)
++.+.+||..++++ ..+..+ .++|+|||++++++.. ++.|.+||+.+++.+..+.. +.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 45777887765533 223222 8999999999999863 67899999999988877753 23
Q ss_pred CCcEEEEEccCCCCEEEEEeC--CCeEEEEECCCCcEEEE
Q 036953 138 RTPWVVRFHPLRSEILASGSL--DHEVRLWDANTSECIGS 175 (792)
Q Consensus 138 ~~VtsVafSP~dg~lLaSgS~--DgtVrLWDl~tg~~v~t 175 (792)
.....++|+| ++++|+++.. +++|.+||+.+++.+..
T Consensus 108 ~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 108 NYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 5677899999 8999888764 68899999988776655
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.94 E-value=3.3e-08 Score=107.09 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=68.8
Q ss_pred EEEccCCCCEEEEEeC-----------CCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCC-
Q 036953 143 VRFHPLRSEILASGSL-----------DHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNK- 210 (792)
Q Consensus 143 VafSP~dg~lLaSgS~-----------DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~- 210 (792)
++|+| +++.++.+.. +++|.+||+.+++.+..+.... +.+++|+|||++|++++.+.|.+||..++
T Consensus 259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~ 336 (361)
T 2oiz_A 259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPE 336 (361)
T ss_dssp EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSS
T ss_pred EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCc
Confidence 56777 5555554432 3489999999999999987555 99999999999999888766999999988
Q ss_pred -CcccCCeEEecCCCCeEEEEEccCCC
Q 036953 211 -EEASSPIIVLKTRRSLRAVHFHPHAA 236 (792)
Q Consensus 211 -~~~~~~~~~~~h~~sVtsVafSPdG~ 236 (792)
+... ........-..+.++|+|.
T Consensus 337 l~~~~---~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 337 PKLLR---TIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEE---EETTSCSSEEEEEECCCSC
T ss_pred ceeeE---EeccCCCCcEEEEecCCCC
Confidence 5332 2234566678899999986
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.94 E-value=4e-09 Score=111.77 Aligned_cols=188 Identities=10% Similarity=0.011 Sum_probs=120.5
Q ss_pred CCeEEEEEcCCCCEEEEEECC---CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 96 RSTIAAAFSPDGRTLASTHGD---HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~D---GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
..+..++|+|||++|+....+ ..|.+||+.+++......++......+.|+| +++.|+.++.++.|++||+.+++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCc
Confidence 336778999999998877653 4788899988875544443333334478999 999999999999999999999876
Q ss_pred EEEec-cCCCeeE-------------------EEEcCCCcEEEEEc------CCeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 173 IGSCD-FYRPIAS-------------------IAFHAEGELLAVAS------GHKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 173 v~t~~-h~s~V~s-------------------VafSpdG~~LasgS------dd~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
..... ....... +.|+|+++.++... +..|++||+.+++.. ....+...+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~----~~~~~~~~~ 190 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE----VIHQDTAWL 190 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE----EEEEESSCE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE----eeccCCccc
Confidence 65554 2222222 34677777665532 234999999887632 233566778
Q ss_pred EEEEEcc-CCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCC
Q 036953 227 RAVHFHP-HAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDD 305 (792)
Q Consensus 227 tsVafSP-dG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpD 305 (792)
..+.|+| +++.|+...... -.. ....+.++....+....+... .....+..+.|+||
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~-~~~----------------~~~~l~~~d~~~~~~~~l~~~-----~~~~~~~~~~~spd 248 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGP-HDL----------------VDARMWLVNEDGSNVRKIKEH-----AEGESCTHEFWIPD 248 (396)
T ss_dssp EEEEEETTEEEEEEEEECSC-SSS----------------CSCCCEEEETTSCCCEESSCC-----CTTEEEEEEEECTT
T ss_pred ccceECCCCCCEEEEEecCC-CCC----------------CCceEEEEECCCCceeEeecc-----CCCccccceEECCC
Confidence 9999999 788777665311 000 001233333333322222210 01346778999999
Q ss_pred CcEEE
Q 036953 306 SRIDL 310 (792)
Q Consensus 306 Gr~lv 310 (792)
|+.|+
T Consensus 249 g~~l~ 253 (396)
T 3c5m_A 249 GSAMA 253 (396)
T ss_dssp SSCEE
T ss_pred CCEEE
Confidence 99776
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.93 E-value=2.9e-08 Score=105.26 Aligned_cols=162 Identities=14% Similarity=0.197 Sum_probs=117.1
Q ss_pred eCCCeEEEEeccCC--Cc------------CCCCCCeEEEEEcC-CCCEEEEEE-CCCeEEEEECCCCcEEEEecC----
Q 036953 76 VEAESLRHLSAKYC--PL------------VPPPRSTIAAAFSP-DGRTLASTH-GDHTVKIIDCQTGNCLKVLSG---- 135 (792)
Q Consensus 76 s~d~sIrvWd~~t~--~L------------~gH~~~V~sLafSP-DG~~LaSGS-~DGtVrIWDl~tgk~v~~L~g---- 135 (792)
..++.|++|+.... .+ .++......++|+| +++.+++.+ .++.|++|| .+++.+..+..
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~ 187 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSG 187 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCS
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCC
Confidence 34567777776433 11 24455789999999 788888776 689999999 56777777642
Q ss_pred ------CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---cCCCeeEEEEcCCCcEEEEEc--------
Q 036953 136 ------HRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD---FYRPIASIAFHAEGELLAVAS-------- 198 (792)
Q Consensus 136 ------H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~---h~s~V~sVafSpdG~~LasgS-------- 198 (792)
+-..+.+++++|+.+.++++...++.|++||..+++.+..+. +...+..++|+| +..+...+
T Consensus 188 ~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 188 SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQE 266 (329)
T ss_dssp SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSC
T ss_pred CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCC
Confidence 224489999999337888888889999999999899888873 556788999999 44444332
Q ss_pred CCeEEEEECCCCCcccCCeEE---ecCCCCeEEEEEccCCCeEEEEEe
Q 036953 199 GHKLYIWPYNNKEEASSPIIV---LKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 199 dd~V~IWDlrt~~~~~~~~~~---~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
+..|++||+.+++... .. ..+......++++|+|. ++++..
T Consensus 267 ~~~v~~~~~~~g~~~~---~~~~~~~~~~~p~~ia~~~dG~-lyvad~ 310 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIID---VFKPVRKHFDMPHDIVASEDGT-VYIGDA 310 (329)
T ss_dssp CCCEEEEETTTCCEEE---EECCSSSCCSSEEEEEECTTSE-EEEEES
T ss_pred CcEEEEEEcCCCeEEE---EEcCCCCccCCeeEEEECCCCC-EEEEEC
Confidence 2359999998877433 11 23556789999999994 655553
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.91 E-value=1.7e-08 Score=112.04 Aligned_cols=140 Identities=11% Similarity=0.104 Sum_probs=107.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc
Q 036953 92 VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSE 171 (792)
Q Consensus 92 ~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~ 171 (792)
..+.. |+.++| |++.|+++ .++.|++||+.+......+..|+..+.++.+.+ . .++.++.||+|.+||+.+++
T Consensus 85 ~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 85 KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCC
T ss_pred eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCc
Confidence 34666 999999 99999999 889999999988776667777888899888876 2 38889999999999999887
Q ss_pred EEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCc--cc---CCeEEe---cCCCCeEEEEEccCCCeEEEEE
Q 036953 172 CIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEE--AS---SPIIVL---KTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 172 ~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~--~~---~~~~~~---~h~~sVtsVafSPdG~~LlaS~ 242 (792)
... ....|.+++|+|+| +.+...++++++|+....+. .. .+.... .|...|.+|.|.+++.++++=.
T Consensus 158 ~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 158 TKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEE---EEESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred ccc---ccCCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 654 34689999999999 44444477799998876652 11 000011 2678899999999998776433
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.88 E-value=1.9e-07 Score=94.12 Aligned_cols=141 Identities=9% Similarity=0.073 Sum_probs=99.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec-CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 036953 95 PRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS-GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~-gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
...+.+++++++++.+++.. ++.|.+||...... ..+. .....+.++++++ +++++++...++.|.+||..+....
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeE
Confidence 34678899999998655554 88999999876543 3333 2335789999999 8888888778899999987665443
Q ss_pred EEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 174 GSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 174 ~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
... .....+.+++++++|+++++.. ++.|++||........ ....+...+..++++++|. +.++.
T Consensus 143 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~d~~g~-l~v~~ 209 (270)
T 1rwi_B 143 VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV---LPFTDITAPWGIAVDEAGT-VYVTE 209 (270)
T ss_dssp ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE---CCCSSCCSEEEEEECTTCC-EEEEE
T ss_pred eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe---ecccCCCCceEEEECCCCC-EEEEE
Confidence 322 2334678899999999777665 5679999987655321 1122336688999999995 55444
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.88 E-value=1e-07 Score=111.87 Aligned_cols=146 Identities=10% Similarity=0.065 Sum_probs=106.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCe------
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDH-----TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHE------ 161 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DG-----tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dgt------ 161 (792)
+|...+..++|||||++|+.+..++ +|++||+.+++.+.....+. .+..++|+| |++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEe-CCCEEEEEEECCccccccc
Confidence 3444688999999999998776543 89999999998765433222 367899999 9999998888766
Q ss_pred ----------EEEEECCCCcE--EEEec---cCCCeeEEEEcCCCcEEEEEc------CCeEEEEECCC------CCccc
Q 036953 162 ----------VRLWDANTSEC--IGSCD---FYRPIASIAFHAEGELLAVAS------GHKLYIWPYNN------KEEAS 214 (792)
Q Consensus 162 ----------VrLWDl~tg~~--v~t~~---h~s~V~sVafSpdG~~LasgS------dd~V~IWDlrt------~~~~~ 214 (792)
|++|++.+++. ...+. +...+..+.|+|||++|+..+ +..|++||+.+ +...
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~- 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK- 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC-
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc-
Confidence 99999988762 22222 345678999999999888765 23499999976 3211
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 215 SPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 215 ~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
...+..+...+.. .|+|+|+.|++.+.
T Consensus 279 -~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 279 -WVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp -CEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred -eEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 2334445555555 48899998887764
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.86 E-value=3.1e-07 Score=96.20 Aligned_cols=164 Identities=13% Similarity=0.045 Sum_probs=119.9
Q ss_pred CcEEEEEeCCCeEEEEeccCCC----cCCCC-CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCC-CCcEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCP----LVPPP-RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHR-RTPWV 142 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~----L~gH~-~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~-~~Vts 142 (792)
+..+++.+.++.|.+||.++++ +..+. ..+.++.++|+|+.|+ +.++.|+.||. +++.++.+..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 3455566667777777775553 22333 4688999999999888 45788999998 899999998653 46888
Q ss_pred EEEccCCCCEEEEEeC-CCeEEEEECCCCcEEEEeccC-------CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcc
Q 036953 143 VRFHPLRSEILASGSL-DHEVRLWDANTSECIGSCDFY-------RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 143 VafSP~dg~lLaSgS~-DgtVrLWDl~tg~~v~t~~h~-------s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~ 213 (792)
+.+.+ +++++++.+. ++.|..+|. +++.++.+... .....+.+.++|++|++.. ++.|.+||.+ ++..
T Consensus 82 ~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 82 ARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 99999 9999999887 778888886 77777776421 2345667889999999887 5669999987 6643
Q ss_pred cCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 214 SSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 214 ~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
. ..........+.+.++|+.+++..
T Consensus 159 w----~~~~~~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 159 N----SVKLSGTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp E----EEECSSCCCEEEECTTSCEEEECB
T ss_pred E----EEECCCCccceeEcCCCCEEEEeC
Confidence 2 233334566788889998665543
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.83 E-value=2.5e-07 Score=95.53 Aligned_cols=139 Identities=9% Similarity=0.037 Sum_probs=105.2
Q ss_pred CCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 036953 95 PRSTIAAAFSPDGR-TLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 95 ~~~V~sLafSPDG~-~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
.....+++|+|+++ .++++..++.|.+||..++ ...+..+...+.++++++ +++++++...++.|.+||..+++..
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEE
Confidence 44578999999998 6778888999999999877 666777788899999999 8888888777899999999888765
Q ss_pred EEec-----cCCCeeEEEEcCCCcEEEEE----c--------------CCeEEEEECCCCCcccCCeEEecCCCCeEEEE
Q 036953 174 GSCD-----FYRPIASIAFHAEGELLAVA----S--------------GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVH 230 (792)
Q Consensus 174 ~t~~-----h~s~V~sVafSpdG~~Lasg----S--------------dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVa 230 (792)
.... ....+..++++++|+++++. . .+.|+.||.. ++ ......+....+.++
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT----LSAPIRDRVKPNGLA 178 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC----EEEEECCCSSEEEEE
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC----EEEeecCCCCCccEE
Confidence 4432 12356789999999988873 2 2346666654 32 123344556778999
Q ss_pred EccCCCeEEEEE
Q 036953 231 FHPHAAPFVLTA 242 (792)
Q Consensus 231 fSPdG~~LlaS~ 242 (792)
|+|+++.+ ++.
T Consensus 179 ~s~dg~~l-v~~ 189 (296)
T 3e5z_A 179 FLPSGNLL-VSD 189 (296)
T ss_dssp ECTTSCEE-EEE
T ss_pred ECCCCCEE-EEe
Confidence 99999977 544
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.77 E-value=1.1e-06 Score=90.54 Aligned_cols=144 Identities=10% Similarity=0.079 Sum_probs=94.4
Q ss_pred CCCCeEEEEEcCC-CCEEEEEECCCeEEEEECCCCcEEEE-ecC----CCCCcEEEEEccCCCCEEEEEeCC--------
Q 036953 94 PPRSTIAAAFSPD-GRTLASTHGDHTVKIIDCQTGNCLKV-LSG----HRRTPWVVRFHPLRSEILASGSLD-------- 159 (792)
Q Consensus 94 H~~~V~sLafSPD-G~~LaSGS~DGtVrIWDl~tgk~v~~-L~g----H~~~VtsVafSP~dg~lLaSgS~D-------- 159 (792)
+...+.+++++++ ++.++ +..++.|.+||.. ++.... ... ....+.++++++ +++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYT 145 (314)
T ss_dssp EECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCC
T ss_pred CCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCccccccccc
Confidence 4467999999998 65444 4444579999988 765433 221 124588999999 88888877655
Q ss_pred -------CeEEEEECCCCcEEEEeccCCCeeEEEEc----CCCcEEEEEc--CCeEEEEECC-CCCcccC-CeEEe-cCC
Q 036953 160 -------HEVRLWDANTSECIGSCDFYRPIASIAFH----AEGELLAVAS--GHKLYIWPYN-NKEEASS-PIIVL-KTR 223 (792)
Q Consensus 160 -------gtVrLWDl~tg~~v~t~~h~s~V~sVafS----pdG~~LasgS--dd~V~IWDlr-t~~~~~~-~~~~~-~h~ 223 (792)
+.|..||.. ++.............++|+ ++++.|+++. +++|++||++ .++.... ..... .+.
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp BTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred ccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC
Confidence 567888876 6555444444567899999 9997665553 5679999986 3321110 01111 122
Q ss_pred -CCeEEEEEccCCCeEEEE
Q 036953 224 -RSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 224 -~sVtsVafSPdG~~LlaS 241 (792)
.....++++++|+.+++.
T Consensus 225 ~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 225 EGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp SCEEEEEEEBTTCCEEEEE
T ss_pred CCCCCceEECCCCCEEEEE
Confidence 557889999999855544
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.76 E-value=4.2e-07 Score=91.68 Aligned_cols=169 Identities=9% Similarity=0.007 Sum_probs=118.5
Q ss_pred CcEEEEEeCCCeEEEEeccCCCcC----CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCPLV----PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~L~----gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
+..+|....++.|..|+.....+. .....+..++++++|+.+++...++.|.+|+..+.............+.+++
T Consensus 77 ~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~ 156 (270)
T 1rwi_B 77 AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVA 156 (270)
T ss_dssp TCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEE
T ss_pred CCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEE
Confidence 344666655778888887654321 2235689999999999777777788999998665544333333345678999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT 222 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h 222 (792)
+++ +++++++...++.|.+||.......... .....+.+++++++|.++++.. ++.|.+||........ ....+
T Consensus 157 ~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~---~~~~~ 232 (270)
T 1rwi_B 157 VDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV---LPFTG 232 (270)
T ss_dssp ECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE---CCCCS
T ss_pred EeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee---eccCC
Confidence 999 8888888777899999999876654432 2336788999999997777665 4569999986654221 11123
Q ss_pred CCCeEEEEEccCCCeEEEEE
Q 036953 223 RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 223 ~~sVtsVafSPdG~~LlaS~ 242 (792)
...+.+++++++|+ ++++.
T Consensus 233 ~~~p~~i~~~~~g~-l~v~~ 251 (270)
T 1rwi_B 233 LNTPLAVAVDSDRT-VYVAD 251 (270)
T ss_dssp CSCEEEEEECTTCC-EEEEE
T ss_pred CCCceeEEECCCCC-EEEEE
Confidence 35689999999998 54444
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.73 E-value=2.4e-07 Score=108.56 Aligned_cols=141 Identities=17% Similarity=0.116 Sum_probs=99.5
Q ss_pred CCCCCeEEEEEcCCCCEEEE-----EECCCeEEEEECCCCcEEEEecCCCCCc--EEEEEccCCCCEEEEEeCCCe----
Q 036953 93 PPPRSTIAAAFSPDGRTLAS-----THGDHTVKIIDCQTGNCLKVLSGHRRTP--WVVRFHPLRSEILASGSLDHE---- 161 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaS-----GS~DGtVrIWDl~tgk~v~~L~gH~~~V--tsVafSP~dg~lLaSgS~Dgt---- 161 (792)
+|...+..++|||||++|+. |+.+.+|++||+.+++.+. ..+...+ ..++|+| |++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCc
Confidence 46667899999999999984 3445789999999987541 1122222 6799999 9999999988876
Q ss_pred ---------EEEEECCCCcE--EEEec---cCCCeeEEEEcCCCcEEEEEc-CC----eEEEEECCCCCcccCCeEEecC
Q 036953 162 ---------VRLWDANTSEC--IGSCD---FYRPIASIAFHAEGELLAVAS-GH----KLYIWPYNNKEEASSPIIVLKT 222 (792)
Q Consensus 162 ---------VrLWDl~tg~~--v~t~~---h~s~V~sVafSpdG~~LasgS-dd----~V~IWDlrt~~~~~~~~~~~~h 222 (792)
|++|++.+++. ...+. +...+..+.|+|||++|+..+ ++ .|++||..+++ ...+..+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----~~~l~~~ 270 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----FRLLVKG 270 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----CEEEEEC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----eEEeecC
Confidence 99999998762 23332 345788999999999887765 33 37777654443 2234445
Q ss_pred CCCeEEEEEccCCCeEEEEE
Q 036953 223 RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 223 ~~sVtsVafSPdG~~LlaS~ 242 (792)
...+....| ++|+ +++.+
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s 288 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLT 288 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEE
T ss_pred CCceEEEEe-cCCc-EEEEE
Confidence 556666667 6777 66554
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.72 E-value=3.9e-07 Score=107.61 Aligned_cols=183 Identities=10% Similarity=0.038 Sum_probs=115.3
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcC-CCCCC--eEEEEEcCCCCEEEEEECCCe-
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLV-PPPRS--TIAAAFSPDGRTLASTHGDHT- 118 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~-gH~~~--V~sLafSPDG~~LaSGS~DGt- 118 (792)
.+....|+|+++.++.+. ...+ .+...|++|+..++... .+... +..++|+|| +.|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~-----~~~G------~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSV-----QDGG------SDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp EEEEEEECTTSSEEEEEE-----EETT------CSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC-
T ss_pred EEEeEEECCCCCEEEEEE-----cCCC------CceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcc
Confidence 466778999988765541 1111 11235788887766432 11112 257899999 99998887654
Q ss_pred -------------EEEEECCCCcE--EEEec--CCCCCcEEEEEccCCCCEEEEEeCCC-----eEEEEECCCC--c-EE
Q 036953 119 -------------VKIIDCQTGNC--LKVLS--GHRRTPWVVRFHPLRSEILASGSLDH-----EVRLWDANTS--E-CI 173 (792)
Q Consensus 119 -------------VrIWDl~tgk~--v~~L~--gH~~~VtsVafSP~dg~lLaSgS~Dg-----tVrLWDl~tg--~-~v 173 (792)
|++|++.+++. ...+. .+...+..+.|+| |+++|+..+.++ .|++||+.++ + ..
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 89999987752 23333 3444688999999 888888777544 8999999887 4 44
Q ss_pred EEeccCCCeeEEEEcCCCcEEEEEcC-----CeEEEEECCCCC-cccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 174 GSCDFYRPIASIAFHAEGELLAVASG-----HKLYIWPYNNKE-EASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 174 ~t~~h~s~V~sVafSpdG~~LasgSd-----d~V~IWDlrt~~-~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
............. +++|+.|+..++ .+|.+||+.+.. ... .....+...+..+.|+ +..++++..
T Consensus 311 ~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--~l~~~~~~~l~~~~~~--~~~lv~~~~ 381 (741)
T 1yr2_A 311 ALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD--TVVPESKDNLESVGIA--GNRLFASYI 381 (741)
T ss_dssp EEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEE--EEECCCSSEEEEEEEE--BTEEEEEEE
T ss_pred EecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccE--EEecCCCCeEEEEEEE--CCEEEEEEE
Confidence 4444444444443 488887777652 239999997752 111 1222334456677776 445665554
No 195
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.72 E-value=2.9e-07 Score=102.18 Aligned_cols=179 Identities=8% Similarity=0.041 Sum_probs=121.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCc-----------EEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEE
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGN-----------CLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLW 165 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk-----------~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLW 165 (792)
.++.+++++....+++|+.|+ +++|++...+ ....+ .+.. |+.++| ++++|+.+ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 689999999999999999985 6679865332 11223 3666 999999 56888888 88999999
Q ss_pred ECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 166 DANTSECIGSC-DFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 166 Dl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
|+++....... .+...+.++.+.+.. ++++.+++.|.+||++...... ....|++++|+|+| ++++..+
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEEETT
T ss_pred EchhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEEEcC
Confidence 99876544333 466778888776543 4444457779999998776421 34579999999999 5666655
Q ss_pred CccccCCCceeeecCCCcccCCCCceEEEEecCCCE---EEEeeccCccc---CCCceEEEeEECCCCcEEEEccccc
Q 036953 245 NDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDH---VSLAAELPLMS---SLPFLIVPSVSIDDSRIDLQHASRR 316 (792)
Q Consensus 245 ~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~---~~l~s~l~~l~---gh~~~VwdV~~SpDGr~lv~~~~~~ 316 (792)
.++..+ ....+.+ ..+... +.+. +|...|.++.|.++++++++....+
T Consensus 182 g~i~~~-----------------------~~~~~~~~~k~~I~~P-p~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~ 235 (388)
T 1xip_A 182 RSFQSF-----------------------AWRNGEMEKQFEFSLP-SELEELPVEEYSPLSVTILSPQDFLAVFGNVI 235 (388)
T ss_dssp SCEEEE-----------------------EEETTEEEEEEEECCC-HHHHTSCTTTSEEEEEEESSSSEEEEEEECCC
T ss_pred CcEEEE-----------------------cCCCccccccceecCC-cccccccCCCeeEEEEEEecCCeEEEEEcCCC
Confidence 544332 1122221 112111 1122 3789999999999999999544443
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.71 E-value=1e-06 Score=92.29 Aligned_cols=200 Identities=12% Similarity=0.045 Sum_probs=137.5
Q ss_pred CCCceEeeecccceeeCCC---C-ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcCCCCCC
Q 036953 22 RRRARNVSRLLAHREISPK---T-KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLVPPPRS 97 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels~~---t-k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~gH~~~ 97 (792)
..+.+.+|+....+.+... . ..+....++|+++++.++ + ..+.....++. .+|.... +....
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-------~--~~V~~~d~~G~-~~W~~~~----~~~~~ 78 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-------S--KGAKMITRDGR-ELWNIAA----PAGCE 78 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC-------B--SEEEEECTTSC-EEEEEEC----CTTCE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC-------C--CCEEEECCCCC-EEEEEcC----CCCcc
Confidence 4566777877565555421 1 246677778887766532 1 12333333332 3454432 12245
Q ss_pred eEEEEEcCCCCEEEEEEC-CCeEEEEECCCCcEEEEec------CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC
Q 036953 98 TIAAAFSPDGRTLASTHG-DHTVKIIDCQTGNCLKVLS------GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS 170 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS~-DGtVrIWDl~tgk~v~~L~------gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg 170 (792)
+.++.+.+||+.+++.+. ++.|..+|. +++.++.+. .+......+++.+ +++++++...++.|.+||.. +
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-S
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-C
Confidence 889999999999999887 778888885 677777664 1222455677888 89999999999999999998 9
Q ss_pred cEEEEeccCCCeeEEEEcCCCcEEEEEcCC-eEEEEECCCCCcccCCeEEecC------CCCeEEEEEccCCCeEEEE
Q 036953 171 ECIGSCDFYRPIASIAFHAEGELLAVASGH-KLYIWPYNNKEEASSPIIVLKT------RRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 171 ~~v~t~~h~s~V~sVafSpdG~~LasgSdd-~V~IWDlrt~~~~~~~~~~~~h------~~sVtsVafSPdG~~LlaS 241 (792)
+.++.+.......++...++|++++++.++ +|..+|..+++... ..... -..+..+...++|..+++.
T Consensus 156 ~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w---~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 156 QLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR---RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE---EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE---EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 999999876777788889999999888754 59999998887543 11111 1237788888998855443
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.70 E-value=2.1e-06 Score=91.31 Aligned_cols=166 Identities=11% Similarity=0.061 Sum_probs=119.4
Q ss_pred EEEEEe-CCCeEEEEeccCCCcC-----CC----CCCeEEEEEcCCCCEEEEEE--CCCeEEEEECCCCcEEEEecCCCC
Q 036953 71 GLVSWV-EAESLRHLSAKYCPLV-----PP----PRSTIAAAFSPDGRTLASTH--GDHTVKIIDCQTGNCLKVLSGHRR 138 (792)
Q Consensus 71 ~L~S~s-~d~sIrvWd~~t~~L~-----gH----~~~V~sLafSPDG~~LaSGS--~DGtVrIWDl~tgk~v~~L~gH~~ 138 (792)
+++... .++.|.+||..+.++. +. ......+++ ++.+|+++. .++.|.+||+.+++.+..+.. ..
T Consensus 96 ~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~ 172 (328)
T 3dsm_A 96 KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GI 172 (328)
T ss_dssp EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SS
T ss_pred eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CC
Confidence 566655 6788888888765432 11 114556677 455666655 488999999999998887764 33
Q ss_pred CcEEEEEccCCCCEEEEEeCC----------CeEEEEECCCCcEEEEecc--CCCeeEEEEcCCCcEEEEEcCCeEEEEE
Q 036953 139 TPWVVRFHPLRSEILASGSLD----------HEVRLWDANTSECIGSCDF--YRPIASIAFHAEGELLAVASGHKLYIWP 206 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~D----------gtVrLWDl~tg~~v~t~~h--~s~V~sVafSpdG~~LasgSdd~V~IWD 206 (792)
....+.++| ++++++++..+ +.|.+||..+++.+..+.. ......++|+|++++|+++.. .|.+||
T Consensus 173 ~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d 250 (328)
T 3dsm_A 173 QPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMP 250 (328)
T ss_dssp CBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEE
T ss_pred CccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEE
Confidence 467899999 88887777655 7899999999988877653 447899999999999888766 799999
Q ss_pred CCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 207 YNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 207 lrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
..+.+...... ..........++++|++..+.++.
T Consensus 251 ~~t~~~~~~~~-~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 251 VEADRVPVRPF-LEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp TTCSSCCSSCS-BCCCSSCEEEEEECTTTCCEEEEE
T ss_pred CCCCceeeeee-ecCCCCceEEEEEcCCCCeEEEEc
Confidence 98776432111 111245688999999666676665
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.70 E-value=1.3e-05 Score=81.28 Aligned_cols=140 Identities=9% Similarity=0.061 Sum_probs=100.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE-EEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNC-LKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~-v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
+...+.+++++++|+.+++...++.|..||.. ++. ...+......+.++++.+ ++.++++...++.|..||. +++.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCE
Confidence 34679999999999988877778899999986 432 222223556789999998 8888888777889999999 5554
Q ss_pred EEEe--ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEE
Q 036953 173 IGSC--DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFV 239 (792)
Q Consensus 173 v~t~--~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~Ll 239 (792)
.... .....+..++++++|+++++.. ++.|..||. +++... .........+..++++++|+.++
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~~~~g~l~v 198 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--FKIPTPASGPVGITKGNDDALWF 198 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSSEEE
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--eeCCCCCCcceeEEECCCCCEEE
Confidence 4332 2346789999999998887766 467999998 444221 11122345688999999988443
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.69 E-value=5.1e-06 Score=86.60 Aligned_cols=207 Identities=8% Similarity=0.035 Sum_probs=122.0
Q ss_pred eCCCeEEEEeccCCCc--CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC----CCCCcEEEEEccCC
Q 036953 76 VEAESLRHLSAKYCPL--VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG----HRRTPWVVRFHPLR 149 (792)
Q Consensus 76 s~d~sIrvWd~~t~~L--~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g----H~~~VtsVafSP~d 149 (792)
...+.|..|+..++.. ......+.+++++++|+++++ . ++.|.+||..+++....... ....+.+++++| +
T Consensus 32 ~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-d 108 (297)
T 3g4e_A 32 IPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-A 108 (297)
T ss_dssp TTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-T
T ss_pred CCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-C
Confidence 3455566666554422 123467999999999995554 4 56799999988765433321 123478899999 8
Q ss_pred CCEEEEEeCC---------CeEEEEECCC-CcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECC--CCCcccC
Q 036953 150 SEILASGSLD---------HEVRLWDANT-SECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYN--NKEEASS 215 (792)
Q Consensus 150 g~lLaSgS~D---------gtVrLWDl~t-g~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlr--t~~~~~~ 215 (792)
++++++...+ ..-.+|.+.. ++...........+.++|+|+++.|+.+. .++|.+||+. ++....
T Consensus 109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~- 187 (297)
T 3g4e_A 109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN- 187 (297)
T ss_dssp SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE-
T ss_pred CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC-
Confidence 8877765322 2345554442 44443344445678999999998776654 5669999974 333211
Q ss_pred CeEE---ecCCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccC
Q 036953 216 PIIV---LKTRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSS 292 (792)
Q Consensus 216 ~~~~---~~h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~g 292 (792)
.... .........++++++|+.+++..... .+..+...+|..+.... .
T Consensus 188 ~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~-----------------------~v~~~d~~tG~~~~~i~------~ 238 (297)
T 3g4e_A 188 RRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG-----------------------RVIRLDPVTGKRLQTVK------L 238 (297)
T ss_dssp EEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT-----------------------EEEEECTTTCCEEEEEE------C
T ss_pred cEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC-----------------------EEEEEcCCCceEEEEEE------C
Confidence 1111 11235678899999997444332111 12222222344433322 1
Q ss_pred CCceEEEeEEC-CCCcEEEEcccc
Q 036953 293 LPFLIVPSVSI-DDSRIDLQHASR 315 (792)
Q Consensus 293 h~~~VwdV~~S-pDGr~lv~~~~~ 315 (792)
+...+.+++|. ||++.|++....
T Consensus 239 p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 239 PVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp SSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCCCceEEEEeCCCCCEEEEEcCC
Confidence 34578889998 898877744443
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.66 E-value=2.6e-06 Score=98.80 Aligned_cols=135 Identities=13% Similarity=0.047 Sum_probs=103.4
Q ss_pred CCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC--CCcEEEEeccCCCe
Q 036953 105 PDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDAN--TSECIGSCDFYRPI 182 (792)
Q Consensus 105 PDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~--tg~~v~t~~h~s~V 182 (792)
+.+..+++...++.|.+||..+++.+..+.. ...+..+.|+| |++++++++.|+.|.+||+. +++.+..+......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC
Confidence 3445666777789999999999999888873 34577999999 99999999999999999996 78888888766677
Q ss_pred eEEEEc----CCCcEEEEEc--CCeEEEEECCCCCcccCCeEEec--------C-CCCeEEEEEccCCCeEEEEE
Q 036953 183 ASIAFH----AEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLK--------T-RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 183 ~sVafS----pdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~--------h-~~sVtsVafSPdG~~LlaS~ 242 (792)
..++|+ |||+++++++ .+.|.++|..+.+.... ..... | ...+..+.+++++..++++.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~-i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI-QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE-EECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEE-EeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 899999 6999999887 56699999888775431 11111 1 22577788888776555443
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.62 E-value=1.6e-06 Score=101.87 Aligned_cols=186 Identities=9% Similarity=0.026 Sum_probs=117.6
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcC-CCCCCe--EEEEEcCCCCEEEEEECCC--
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLV-PPPRST--IAAAFSPDGRTLASTHGDH-- 117 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~-gH~~~V--~sLafSPDG~~LaSGS~DG-- 117 (792)
.+....|+|++++++.+. +.+ +.+...|++||+.+++.. .+...+ ..++|+ |++.|+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~------~~~-----G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~ 197 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSL------SLA-----GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPD 197 (693)
T ss_dssp EEEEEEECTTSSEEEEEE------ECS-----SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC
T ss_pred EEEEEEECCCCCEEEEEE------ecC-----CCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcc
Confidence 456667888887765431 100 122346888888877532 222223 467999 999999998874
Q ss_pred -----------eEEEEECCCCcE--EEEec--C-CCCCcEEEEEccCCCCEEEEEe-C---CCeEEEEECCCC--cEEEE
Q 036953 118 -----------TVKIIDCQTGNC--LKVLS--G-HRRTPWVVRFHPLRSEILASGS-L---DHEVRLWDANTS--ECIGS 175 (792)
Q Consensus 118 -----------tVrIWDl~tgk~--v~~L~--g-H~~~VtsVafSP~dg~lLaSgS-~---DgtVrLWDl~tg--~~v~t 175 (792)
.|++|++.++.. ...+. . |...+..+.|+| |+++|+... . +..|++||+.++ +....
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 399999987642 33333 3 455678899999 787765433 2 358999999876 34443
Q ss_pred eccCCCeeEEEEcCCCcEEEEEc-C----CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 176 CDFYRPIASIAFHAEGELLAVAS-G----HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 176 ~~h~s~V~sVafSpdG~~LasgS-d----d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
.......... |+++|..|+..+ . .+|..||+.++.... ...+..+...+. .|+++++.|+++....
T Consensus 277 ~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 277 QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPERQQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence 4444444444 566666555443 2 349999998765421 123444555554 8999999888776543
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.60 E-value=1.5e-05 Score=84.47 Aligned_cols=141 Identities=13% Similarity=0.057 Sum_probs=91.3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC---C-CCCcEEEEEccCCCCEEEEEeC------CCeEEE
Q 036953 95 PRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG---H-RRTPWVVRFHPLRSEILASGSL------DHEVRL 164 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g---H-~~~VtsVafSP~dg~lLaSgS~------DgtVrL 164 (792)
...+.+++|+++|+++++. .+ .|.+||..+++....... . ...+.+++++| +++++++... .+.|..
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEE
Confidence 3569999999999877654 44 499999988875433221 1 23578999999 8887776542 245666
Q ss_pred EECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECC--CC-CcccCCeEEe---cCCCCeEEEEEccCCC
Q 036953 165 WDANTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYN--NK-EEASSPIIVL---KTRRSLRAVHFHPHAA 236 (792)
Q Consensus 165 WDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlr--t~-~~~~~~~~~~---~h~~sVtsVafSPdG~ 236 (792)
+| +++...........+.++|+++++.|+.+. ++.|.+||+. ++ +... ..... ........++++++|.
T Consensus 166 ~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~-~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 166 VA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK-AEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp EE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC-CEEEEECTTSSSEEEEEEECTTSC
T ss_pred Ee--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC-ceEEEECCCCCCCCCeeEECCCCC
Confidence 66 555443333445678999999998776654 4569999986 44 2211 11111 1234567889999997
Q ss_pred eEEEE
Q 036953 237 PFVLT 241 (792)
Q Consensus 237 ~LlaS 241 (792)
.++++
T Consensus 243 lwva~ 247 (326)
T 2ghs_A 243 IWNAR 247 (326)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.60 E-value=5.1e-06 Score=86.85 Aligned_cols=140 Identities=13% Similarity=0.097 Sum_probs=92.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec---CC-CCCcEEEEEccCCCCEEEE----EeC-------
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS---GH-RRTPWVVRFHPLRSEILAS----GSL------- 158 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~---gH-~~~VtsVafSP~dg~lLaS----gS~------- 158 (792)
+...+..++++++|+.+++...++.|.+||.. ++...... +. ...+.++++++ ++++++| +..
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCC
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccc
Confidence 34568999999999977666666889999986 55332221 11 23577899999 8888886 332
Q ss_pred ------CCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc-C------CeEEEEECCCCCcccCCeEE-ecCCC
Q 036953 159 ------DHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS-G------HKLYIWPYNNKEEASSPIIV-LKTRR 224 (792)
Q Consensus 159 ------DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS-d------d~V~IWDlrt~~~~~~~~~~-~~h~~ 224 (792)
.+.|..||..+++..... .....+.++|+|+++.|+++. . +.|++||+.... ....... .....
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~ 239 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDG 239 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSS
T ss_pred cccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCC
Confidence 256888888777655444 445678899999999777765 3 469999987543 1101111 11223
Q ss_pred CeEEEEEccCCCe
Q 036953 225 SLRAVHFHPHAAP 237 (792)
Q Consensus 225 sVtsVafSPdG~~ 237 (792)
....++++++|+.
T Consensus 240 ~pdgi~~d~~G~l 252 (305)
T 3dr2_A 240 LPDGFCVDRGGWL 252 (305)
T ss_dssp CCCSEEECTTSCE
T ss_pred CCCeEEECCCCCE
Confidence 3456788888883
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.58 E-value=0.00011 Score=74.41 Aligned_cols=142 Identities=11% Similarity=0.082 Sum_probs=102.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE-EecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLK-VLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~-~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
....+..++++++++.+++...++.|.+||. +++... .+..+...+.++++.+ +++++++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcE
Confidence 3457899999999988887777889999998 555433 2334556789999999 7888887777889999999 6665
Q ss_pred EEE-e-ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 173 IGS-C-DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 173 v~t-~-~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
... . .....+..++++++|+++++.. ++.|.+||. +++... .........+.+++++++|+ +.++.
T Consensus 174 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~ 242 (299)
T 2z2n_A 174 TEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE--FKIPTPNARPHAITAGAGID-LWFTE 242 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECSTTC-EEEEE
T ss_pred EEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE--EECCCCCCCceeEEECCCCC-EEEec
Confidence 543 2 2345688999999999777665 567999998 544211 11222446789999999998 44443
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.54 E-value=1e-05 Score=83.20 Aligned_cols=142 Identities=12% Similarity=0.128 Sum_probs=98.1
Q ss_pred CCCCCeEEEEEcCCCCEEEE-------EECCCeEEEEECCCCcEEEEec----CCCCCcEEEEEccCC-CCEEEEEeCCC
Q 036953 93 PPPRSTIAAAFSPDGRTLAS-------THGDHTVKIIDCQTGNCLKVLS----GHRRTPWVVRFHPLR-SEILASGSLDH 160 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaS-------GS~DGtVrIWDl~tgk~v~~L~----gH~~~VtsVafSP~d-g~lLaSgS~Dg 160 (792)
..-....+++|+++++.+++ +..++.|.+||..+++...... ++...+.++.+++ + ++++++. .++
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~-~~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVAD-MRL 92 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEE-TTT
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEE-CCC
Confidence 33445789999999988877 5778899999988877543222 2557789999999 6 6655554 445
Q ss_pred eEEEEECCCCcEEEE-ec-----cCCCeeEEEEcCCCcEEEEEcC----------------CeEEEEECCCCCcccCCeE
Q 036953 161 EVRLWDANTSECIGS-CD-----FYRPIASIAFHAEGELLAVASG----------------HKLYIWPYNNKEEASSPII 218 (792)
Q Consensus 161 tVrLWDl~tg~~v~t-~~-----h~s~V~sVafSpdG~~LasgSd----------------d~V~IWDlrt~~~~~~~~~ 218 (792)
.|.+||.. ++.... .. ....+.+++++++|+++++... +.|..||.. ++. ..
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~----~~ 166 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM----IQ 166 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE----EE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE----EE
Confidence 79999998 765543 22 1235789999999998877753 347777765 332 12
Q ss_pred EecCCCCeEEEEEc----cCCCeEEEEE
Q 036953 219 VLKTRRSLRAVHFH----PHAAPFVLTA 242 (792)
Q Consensus 219 ~~~h~~sVtsVafS----PdG~~LlaS~ 242 (792)
...+......++|+ |+++.++++.
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEE
Confidence 22333456889999 9997666654
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.53 E-value=5.6e-06 Score=97.74 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=98.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCe-------
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGD-----HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHE------- 161 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~D-----GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dgt------- 161 (792)
|...+..++|||||++|+.++.+ .+|++||+.+++.+.... +...+..++|+| | +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEEST-T-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEEC-C-CEEEEEEecCcccccccc
Confidence 33468899999999999887654 469999999998754321 222245789999 7 88888776654
Q ss_pred -------EEEEECCCCcE--EEEec---cCCCeeEEEEcCCCcEEEEEc-CC-----eEEEEECCCCCcccCCeEEecCC
Q 036953 162 -------VRLWDANTSEC--IGSCD---FYRPIASIAFHAEGELLAVAS-GH-----KLYIWPYNNKEEASSPIIVLKTR 223 (792)
Q Consensus 162 -------VrLWDl~tg~~--v~t~~---h~s~V~sVafSpdG~~LasgS-dd-----~V~IWDlrt~~~~~~~~~~~~h~ 223 (792)
|++|++.+++. ...+. +...+..+.|+|||++|+..+ ++ .|++||+.++.... ...+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP-VTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC-CEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc-cEEecCCC
Confidence 89999987652 23332 223588999999999888765 22 59999997762110 12333444
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 036953 224 RSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 224 ~sVtsVafSPdG~~LlaS~s 243 (792)
..+.... +|+|+.|++.+.
T Consensus 317 ~~~~~~~-~~dg~~l~~~s~ 335 (741)
T 1yr2_A 317 KAQWDFV-DGVGDQLWFVSG 335 (741)
T ss_dssp SSCEEEE-EEETTEEEEEEC
T ss_pred CceEEEE-eccCCEEEEEEC
Confidence 4455553 488998887764
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.51 E-value=1.6e-05 Score=87.79 Aligned_cols=166 Identities=11% Similarity=0.052 Sum_probs=106.0
Q ss_pred CcEEEEEe-CCCeEEEEeccCCCcC---CCCCCeEEEEEcCCCCEEEEEECCC--eEEEEECCCCcEEEEe----cCCCC
Q 036953 69 KRGLVSWV-EAESLRHLSAKYCPLV---PPPRSTIAAAFSPDGRTLASTHGDH--TVKIIDCQTGNCLKVL----SGHRR 138 (792)
Q Consensus 69 ~~~L~S~s-~d~sIrvWd~~t~~L~---gH~~~V~sLafSPDG~~LaSGS~DG--tVrIWDl~tgk~v~~L----~gH~~ 138 (792)
+..|+... .++.|+.|+...+.+. ....... ++|+++++.|+++..++ .|.+||...+.....+ .....
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~ 219 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSG 219 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCS
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcC
Confidence 34454444 3577888887755321 1122233 99999999999988766 7999998766544444 22556
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE----ec-cCCCe--eEEEEcCCCcEEEEE-c-CCeEEEEECCC
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGS----CD-FYRPI--ASIAFHAEGELLAVA-S-GHKLYIWPYNN 209 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t----~~-h~s~V--~sVafSpdG~~Lasg-S-dd~V~IWDlrt 209 (792)
.+.+++++| +...|+.+..++.|+.||..++..... .. ....- ..++|+|++..|+++ . .+.|+.||...
T Consensus 220 ~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 220 KIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp CCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 788999999 444555577788999999988764332 11 11112 399999965444444 4 45699999764
Q ss_pred CCcccCCeEEecC---------------CCCeEEEEEccCCCeEEEEE
Q 036953 210 KEEASSPIIVLKT---------------RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 210 ~~~~~~~~~~~~h---------------~~sVtsVafSPdG~~LlaS~ 242 (792)
... ....+ -.....++|+|+|+ |+++.
T Consensus 299 ~~~-----~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad 340 (409)
T 3hrp_A 299 ECE-----WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD 340 (409)
T ss_dssp CEE-----EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE
T ss_pred CEE-----EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe
Confidence 311 11111 13478999999998 55443
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.51 E-value=2.1e-05 Score=83.92 Aligned_cols=237 Identities=9% Similarity=-0.034 Sum_probs=140.4
Q ss_pred ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCCCcCCCCCCeEEEEEcCCCCEEEEEEC-----C
Q 036953 42 KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYCPLVPPPRSTIAAAFSPDGRTLASTHG-----D 116 (792)
Q Consensus 42 k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~~L~gH~~~V~sLafSPDG~~LaSGS~-----D 116 (792)
.....++++++++++.+.... .++...|+... ++.++-|-.......+|...+..++++++++.+++-.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~---~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQF---YQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGG---GCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCC---CCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 456788888888875543110 01113555555 55554332111122356678999999999876665433 5
Q ss_pred CeEEEEECCCCcEEEEecC------CCCCcEEEEEccCCCCEEEEEe---CCCeEEEEECCCCcEEEEecc---------
Q 036953 117 HTVKIIDCQTGNCLKVLSG------HRRTPWVVRFHPLRSEILASGS---LDHEVRLWDANTSECIGSCDF--------- 178 (792)
Q Consensus 117 GtVrIWDl~tgk~v~~L~g------H~~~VtsVafSP~dg~lLaSgS---~DgtVrLWDl~tg~~v~t~~h--------- 178 (792)
+.|.+||+.+++.+..+.. +...+..+++++.++..+++-. .++.|.+||+.+++....+..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 7899999999987766642 2245789999983455566665 688999999998876654421
Q ss_pred ---------------------CCCeeEEEEcCCCcEEEEEc-C-CeEEEEECCC---CCc----ccCCeEEecCCCCeEE
Q 036953 179 ---------------------YRPIASIAFHAEGELLAVAS-G-HKLYIWPYNN---KEE----ASSPIIVLKTRRSLRA 228 (792)
Q Consensus 179 ---------------------~s~V~sVafSpdG~~LasgS-d-d~V~IWDlrt---~~~----~~~~~~~~~h~~sVts 228 (792)
...+..++|+|+|+.|+++. . .+|+.++... ... .........+......
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 12368899999999888776 3 3466666421 110 0001112223334567
Q ss_pred EEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeeccCcccCCCceEEEeEECCCCcE
Q 036953 229 VHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAELPLMSSLPFLIVPSVSIDDSRI 308 (792)
Q Consensus 229 VafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l~~l~gh~~~VwdV~~SpDGr~ 308 (792)
++++++|. +.++.... ..+..++..+|....+... + +......++++++|++
T Consensus 253 ia~d~~G~-l~va~~~~----------------------~~V~~~d~~~G~~~~~~~~-~----~~~~p~~va~~~~g~l 304 (343)
T 2qe8_A 253 ISIDKDHN-IYVGDLAH----------------------SAIGVITSADRAYKLLVTD-E----KLSWTDSFNFGSDGYL 304 (343)
T ss_dssp EEECTTCC-EEEEEGGG----------------------TEEEEEETTTTEEEEEEEC-G----GGSCEEEEEECTTSCE
T ss_pred EEECCCCC-EEEEccCC----------------------CeEEEEECCCCCEEEEEEC-C----ceecCCeeEECCCCcE
Confidence 89999987 44433211 1233333213333222221 1 2346788999999998
Q ss_pred EE
Q 036953 309 DL 310 (792)
Q Consensus 309 lv 310 (792)
++
T Consensus 305 ~v 306 (343)
T 2qe8_A 305 YF 306 (343)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.47 E-value=1.7e-05 Score=82.67 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=98.8
Q ss_pred CCeEEEEEcCCCCEEEEEECC---------CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEE-EEEeCCCeEEEE
Q 036953 96 RSTIAAAFSPDGRTLASTHGD---------HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEIL-ASGSLDHEVRLW 165 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~D---------GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lL-aSgS~DgtVrLW 165 (792)
..++.++++|+|+.+++...+ ....||.+........+..+......++|+| +++.| ++.+.++.|.+|
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~ 176 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAF 176 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC-CCCEEEEecCCCCcEEEE
Confidence 347899999999976654321 2345555543222333333445678999999 77655 556678899999
Q ss_pred EC--CCCcEE-----EEec-cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEc-cCC
Q 036953 166 DA--NTSECI-----GSCD-FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFH-PHA 235 (792)
Q Consensus 166 Dl--~tg~~v-----~t~~-h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafS-PdG 235 (792)
|+ .++... ..+. .......++++++|++.++.. ++.|.+||..+++... ....+...+++++|. |++
T Consensus 177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~---~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ---TVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp EECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE---EEECSSSBEEEEEEESGGG
T ss_pred eccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE---EEECCCCCceEEEEeCCCC
Confidence 87 455432 1221 335678999999998777765 4569999998776432 233345679999998 899
Q ss_pred CeEEEEEeeCc
Q 036953 236 APFVLTAEVND 246 (792)
Q Consensus 236 ~~LlaS~s~~d 246 (792)
+.|++++....
T Consensus 254 ~~L~vt~~~~~ 264 (297)
T 3g4e_A 254 SEMYVTCARDG 264 (297)
T ss_dssp CEEEEEEBCTT
T ss_pred CEEEEEcCCcC
Confidence 98888876443
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.47 E-value=0.00027 Score=71.44 Aligned_cols=139 Identities=9% Similarity=0.009 Sum_probs=99.7
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE-EEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 036953 95 PRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL-KVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v-~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
...+..++++++++.+++...++.|.+||.. ++.. ..+......+.++++.+ +++++++...++.|..||.. ++..
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEE
Confidence 4678999999999987777668899999987 5543 22233446789999998 88888887778899999987 5554
Q ss_pred EE-ec-cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEE
Q 036953 174 GS-CD-FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFV 239 (792)
Q Consensus 174 ~t-~~-h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~Ll 239 (792)
.. +. ....+..++++++|+++++.. ++.|..||. .++... .........+..++++++|..++
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE--YPLPTNAAAPVGITSGNDGALWF 203 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSSEEE
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE--eeCCCCCCCcceEEECCCCCEEE
Confidence 32 22 346789999999999766665 566999998 443211 11112345688999999987443
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.43 E-value=0.00013 Score=79.83 Aligned_cols=125 Identities=11% Similarity=-0.037 Sum_probs=82.7
Q ss_pred eEEEEeccCCCcCC---CCCCeEEEEEcCCCCEEEEEE----------CCCeEEEEECCCCcEEEEecCC-------CCC
Q 036953 80 SLRHLSAKYCPLVP---PPRSTIAAAFSPDGRTLASTH----------GDHTVKIIDCQTGNCLKVLSGH-------RRT 139 (792)
Q Consensus 80 sIrvWd~~t~~L~g---H~~~V~sLafSPDG~~LaSGS----------~DGtVrIWDl~tgk~v~~L~gH-------~~~ 139 (792)
.+.++|..+.++.. -...- .++++|||++++++. .++.|.+||..+.+.+..+.-- ...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 55666665543211 11123 899999999999886 3678999999988877766421 134
Q ss_pred cEEEEEccCCCCEEEEEeC--CCeEEEEECCCCcEEEE-eccCCCeeEEEEcCCCc--EEEEEcCCeEEEEECCCCC
Q 036953 140 PWVVRFHPLRSEILASGSL--DHEVRLWDANTSECIGS-CDFYRPIASIAFHAEGE--LLAVASGHKLYIWPYNNKE 211 (792)
Q Consensus 140 VtsVafSP~dg~lLaSgS~--DgtVrLWDl~tg~~v~t-~~h~s~V~sVafSpdG~--~LasgSdd~V~IWDlrt~~ 211 (792)
...+.|+| |+++|+.+.. +++|.++| .+++.+.. +..... +.+.++++ +++.+.++++.+||. +++
T Consensus 127 p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 127 SWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred ccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 56899999 8898888774 57899999 99998888 654332 33344442 222223555666666 443
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.30 E-value=6.4e-05 Score=83.03 Aligned_cols=143 Identities=13% Similarity=0.103 Sum_probs=98.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCC--eEEEEECCCCcEE
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDH--EVRLWDANTSECI 173 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dg--tVrLWDl~tg~~v 173 (792)
.....++|+++++.+++...++.|++||..+++........ .... ++|++ +++.|+.+..++ .|.+||...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCcee
Confidence 46889999999997777777899999999887766555443 3334 99999 888888887765 7999998776544
Q ss_pred EEe----c-cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeE---EecCCCCe--EEEEEccCCCeEEEEE
Q 036953 174 GSC----D-FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPII---VLKTRRSL--RAVHFHPHAAPFVLTA 242 (792)
Q Consensus 174 ~t~----~-h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~---~~~h~~sV--tsVafSPdG~~LlaS~ 242 (792)
..+ . ....+.+++++|++..|+++. ++.|+.||........ .. .......- ..++|+|++..|+++.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~--~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL--IKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE--EEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE--EecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 444 2 456678999999544444444 5569999998765221 10 11111222 3899999766676665
Q ss_pred e
Q 036953 243 E 243 (792)
Q Consensus 243 s 243 (792)
.
T Consensus 286 ~ 286 (409)
T 3hrp_A 286 Q 286 (409)
T ss_dssp T
T ss_pred C
Confidence 3
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.30 E-value=4.5e-05 Score=79.57 Aligned_cols=139 Identities=12% Similarity=0.075 Sum_probs=93.2
Q ss_pred CCeEEEEEcCCCCEEEE----EEC-------------CCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeC
Q 036953 96 RSTIAAAFSPDGRTLAS----THG-------------DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSL 158 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaS----GS~-------------DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~ 158 (792)
..++.++++++|+.+++ |.. .+.|..||..+++..... .......++|+| +++.|+.+..
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp-dg~~lyv~~~ 207 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP-DEQTLYVSQT 207 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECT-TSSEEEEEEC
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC-CCCEEEEEec
Confidence 34678999999998886 332 246777887667654433 445678899999 8887766655
Q ss_pred C------CeEEEEECCCCcEE--EEe--ccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEecCCCCeEE
Q 036953 159 D------HEVRLWDANTSECI--GSC--DFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLKTRRSLRA 228 (792)
Q Consensus 159 D------gtVrLWDl~tg~~v--~t~--~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~h~~sVts 228 (792)
. +.|.+||+..+... ..+ ........++++++|++.++ ..++|.+||.. ++.. ........+..
T Consensus 208 ~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~gv~~~~~~-g~~~----~~~~~~~~~~~ 281 (305)
T 3dr2_A 208 PEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGTGVCVFDSD-GQLL----GHIPTPGTASN 281 (305)
T ss_dssp CC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSSEEEEECTT-SCEE----EEEECSSCCCE
T ss_pred CCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCCcEEEECCC-CCEE----EEEECCCceeE
Confidence 4 78999998765411 111 12344567899999995544 45679999984 3322 12222235889
Q ss_pred EEEccCCCeEEEEEe
Q 036953 229 VHFHPHAAPFVLTAE 243 (792)
Q Consensus 229 VafSPdG~~LlaS~s 243 (792)
++|.++++.|.+++.
T Consensus 282 ~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 282 CTFDQAQQRLFITGG 296 (305)
T ss_dssp EEECTTSCEEEEEET
T ss_pred EEEeCCCCEEEEEcC
Confidence 999999988877764
No 214
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.26 E-value=0.00013 Score=79.80 Aligned_cols=155 Identities=10% Similarity=0.029 Sum_probs=92.4
Q ss_pred CCeEEEEeccCCCcCC-----------CCCCeEEEEEcCCCCEEEEEEC--CCeEEEEECCCCcEEEE-ecCCCCCcEEE
Q 036953 78 AESLRHLSAKYCPLVP-----------PPRSTIAAAFSPDGRTLASTHG--DHTVKIIDCQTGNCLKV-LSGHRRTPWVV 143 (792)
Q Consensus 78 d~sIrvWd~~t~~L~g-----------H~~~V~sLafSPDG~~LaSGS~--DGtVrIWDl~tgk~v~~-L~gH~~~VtsV 143 (792)
++.+.+||..+.+... +......++|+|||++|+++.. ++.|.++| .+++.+.. +.. .+. +
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~~---~ 170 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PTC---Y 170 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cce---E
Confidence 4567777765432211 0123458999999999999874 47899999 99988877 542 111 2
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEE--------------------------------------------------
Q 036953 144 RFHPLRSEILASGSLDHEVRLWDANTSECI-------------------------------------------------- 173 (792)
Q Consensus 144 afSP~dg~lLaSgS~DgtVrLWDl~tg~~v-------------------------------------------------- 173 (792)
.+.|.....+++.+.|+++.+||. +++.+
T Consensus 171 ~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~ 249 (373)
T 2mad_H 171 HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNK 249 (373)
T ss_pred EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEe
Confidence 233322334444445555555554 33222
Q ss_pred EEecc-----------CCCeeEEEEcCCCcEEEEEcC-----------CeEEEEECCCCCcccCCeEEecCCCCeEEEEE
Q 036953 174 GSCDF-----------YRPIASIAFHAEGELLAVASG-----------HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHF 231 (792)
Q Consensus 174 ~t~~h-----------~s~V~sVafSpdG~~LasgSd-----------d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVaf 231 (792)
..+.. ......+.++++++.++++.+ +.|.++|..+.+... ..........+.|
T Consensus 250 ~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~----~i~~g~~p~~i~~ 325 (373)
T 2mad_H 250 APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS----QISLGHDVDAISV 325 (373)
T ss_pred eeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEE----EEECCCCcCeEEE
Confidence 11100 111223678888887777542 359999998887543 2233345789999
Q ss_pred ccCCC-eEEEEE
Q 036953 232 HPHAA-PFVLTA 242 (792)
Q Consensus 232 SPdG~-~LlaS~ 242 (792)
+|||+ .++++.
T Consensus 326 s~Dg~~~l~v~~ 337 (373)
T 2mad_H 326 AQDGGPDLYALS 337 (373)
T ss_pred CCCCCeEEEEEc
Confidence 99999 454444
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.25 E-value=3.2e-05 Score=87.22 Aligned_cols=175 Identities=13% Similarity=0.176 Sum_probs=116.2
Q ss_pred cCCcEEEEEeCCCeEEEEeccCCC----cCC----------C-CCCeEEEEEcCCCCEEEEEECC------CeEEEEECC
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYCP----LVP----------P-PRSTIAAAFSPDGRTLASTHGD------HTVKIIDCQ 125 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~~----L~g----------H-~~~V~sLafSPDG~~LaSGS~D------GtVrIWDl~ 125 (792)
+.+..++.+..+..|.++|..+.. +.. . ...-..+..+|+| .++++..+ +.|.++|..
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 344445556677889999986541 110 0 0123456788999 77766555 789999999
Q ss_pred CCcEEEEecCCC---CCcEEEEEccCCCCEEEEEe-------------------CCCeEEEEECCCCcEEEEeccC---C
Q 036953 126 TGNCLKVLSGHR---RTPWVVRFHPLRSEILASGS-------------------LDHEVRLWDANTSECIGSCDFY---R 180 (792)
Q Consensus 126 tgk~v~~L~gH~---~~VtsVafSP~dg~lLaSgS-------------------~DgtVrLWDl~tg~~v~t~~h~---s 180 (792)
+++.+..+..-. ..-..+-|+| +.+.+++.. .+.+|.+||+.+++.+.++... .
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 999998886221 2345688899 888888874 3789999999999888888653 2
Q ss_pred CeeEEEE--cCCCcEEEEEcC-------CeEEEEECCCCCcccCCeEEecC-----------------CCCeEEEEEccC
Q 036953 181 PIASIAF--HAEGELLAVASG-------HKLYIWPYNNKEEASSPIIVLKT-----------------RRSLRAVHFHPH 234 (792)
Q Consensus 181 ~V~sVaf--SpdG~~LasgSd-------d~V~IWDlrt~~~~~~~~~~~~h-----------------~~sVtsVafSPd 234 (792)
....+.| +|+++++++++. +.|.+|..+.++........... ......+.++||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3445555 999998777653 34766665443211100000000 245678999999
Q ss_pred CCeEEEEEe
Q 036953 235 AAPFVLTAE 243 (792)
Q Consensus 235 G~~LlaS~s 243 (792)
|++|.++..
T Consensus 332 GrfLYVSnr 340 (462)
T 2ece_A 332 DKFLYLSLW 340 (462)
T ss_dssp SCEEEEEET
T ss_pred CCEEEEEeC
Confidence 999998876
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.25 E-value=0.00014 Score=76.98 Aligned_cols=167 Identities=11% Similarity=0.070 Sum_probs=105.4
Q ss_pred cEEEEEeCCCeEEEEeccCCCcC---C----C-CCCeEEEEEcCCCCEEEEEEC------CCeEEEEECCCCcEEEEecC
Q 036953 70 RGLVSWVEAESLRHLSAKYCPLV---P----P-PRSTIAAAFSPDGRTLASTHG------DHTVKIIDCQTGNCLKVLSG 135 (792)
Q Consensus 70 ~~L~S~s~d~sIrvWd~~t~~L~---g----H-~~~V~sLafSPDG~~LaSGS~------DGtVrIWDl~tgk~v~~L~g 135 (792)
..+|.+..+ .|.+|+..++++. . . ...+++++++++|+.+++... .+.|..+| +++.. .+..
T Consensus 101 g~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~ 176 (326)
T 2ghs_A 101 SKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFA 176 (326)
T ss_dssp TEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEE
T ss_pred CeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeC
Confidence 344444433 3667776544321 1 1 235889999999997765542 24555555 45433 3333
Q ss_pred CCCCcEEEEEccCCCCEE-EEEeCCCeEEEEECC--CC-c-----EEEEec-cCCCeeEEEEcCCCcEEEEEc-CCeEEE
Q 036953 136 HRRTPWVVRFHPLRSEIL-ASGSLDHEVRLWDAN--TS-E-----CIGSCD-FYRPIASIAFHAEGELLAVAS-GHKLYI 204 (792)
Q Consensus 136 H~~~VtsVafSP~dg~lL-aSgS~DgtVrLWDl~--tg-~-----~v~t~~-h~s~V~sVafSpdG~~LasgS-dd~V~I 204 (792)
+......++|+| +++.+ ++.+.++.|.+||+. ++ + ....+. .......++++++|.+.++.. +++|.+
T Consensus 177 ~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 177 DISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp EESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred CCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 444678899999 77655 454567899999986 55 3 122222 234567899999998777664 467999
Q ss_pred EECCCCCcccCCeEEecCCCCeEEEEEc-cCCCeEEEEEeeC
Q 036953 205 WPYNNKEEASSPIIVLKTRRSLRAVHFH-PHAAPFVLTAEVN 245 (792)
Q Consensus 205 WDlrt~~~~~~~~~~~~h~~sVtsVafS-PdG~~LlaS~s~~ 245 (792)
||. .++... ........+++++|. ++++.|+++....
T Consensus 256 ~d~-~g~~~~---~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 256 YDT-DGNHIA---RYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ECT-TCCEEE---EEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ECC-CCCEEE---EEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 998 343221 223345579999998 8988887776544
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.24 E-value=0.00014 Score=85.38 Aligned_cols=159 Identities=13% Similarity=0.102 Sum_probs=104.0
Q ss_pred CeEEEEeccCCC-----c---CC-CCCCeEEEEEcCCCCEEEEEEC----CCeEEEEECCCCc-EEEEecCCCCCcEEEE
Q 036953 79 ESLRHLSAKYCP-----L---VP-PPRSTIAAAFSPDGRTLASTHG----DHTVKIIDCQTGN-CLKVLSGHRRTPWVVR 144 (792)
Q Consensus 79 ~sIrvWd~~t~~-----L---~g-H~~~V~sLafSPDG~~LaSGS~----DGtVrIWDl~tgk-~v~~L~gH~~~VtsVa 144 (792)
..|.+|+..+.+ + .. |...+..+.|+|||++|+.... +..|++||+.+++ ....+..+.......
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~- 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL- 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-
Confidence 457777765442 1 22 3445788999999998865442 3589999998764 455666677666665
Q ss_pred EccCCCCEEEEEeCC---CeEEEEECCCCcE---EEEeccCCCeeEEEEcCCCcEEEEEc--CC--eEEEEECCCCCccc
Q 036953 145 FHPLRSEILASGSLD---HEVRLWDANTSEC---IGSCDFYRPIASIAFHAEGELLAVAS--GH--KLYIWPYNNKEEAS 214 (792)
Q Consensus 145 fSP~dg~lLaSgS~D---gtVrLWDl~tg~~---v~t~~h~s~V~sVafSpdG~~LasgS--dd--~V~IWDlrt~~~~~ 214 (792)
|+++++.+++....+ +.|..||+.++.. .....+...+. .|++++++|+... ++ .|++||+......
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~- 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVR- 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEE-
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeE-
Confidence 555245555555544 5799999988654 33344444444 8899998887765 33 3999998754321
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 215 SPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 215 ~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
.........+..+.++++++.++.+..
T Consensus 364 --~l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 364 --EVALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp --EECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred --EeecCCCceEEeeecCCCCCEEEEEec
Confidence 122234456778888888887776654
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.23 E-value=0.00054 Score=69.15 Aligned_cols=165 Identities=12% Similarity=0.075 Sum_probs=111.2
Q ss_pred cEEEEEeC-CCeEEEEeccCCC-----cCCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE-EecCCCCCcEE
Q 036953 70 RGLVSWVE-AESLRHLSAKYCP-----LVPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLK-VLSGHRRTPWV 142 (792)
Q Consensus 70 ~~L~S~s~-d~sIrvWd~~t~~-----L~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~-~L~gH~~~Vts 142 (792)
..+|.... ++.|..++.. ++ +......+.+++++++++.+++...++.|..||.. ++... .+......+.+
T Consensus 73 g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 73 GDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred CCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCcee
Confidence 34444443 4556666654 22 12234668999999999988877768899999987 55442 23334567899
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEE
Q 036953 143 VRFHPLRSEILASGSLDHEVRLWDANTSECIGSC--DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIV 219 (792)
Q Consensus 143 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~ 219 (792)
+++.+ +++++++...++.|..||. +++..... .....+..++++++|+++++.. .+.|.+||. .++... ...
T Consensus 151 i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~ 225 (300)
T 2qc5_A 151 ITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE--YDI 225 (300)
T ss_dssp EEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EEC
T ss_pred EEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE--EEC
Confidence 99999 7887777777889999998 55544322 2345688999999998777765 456999998 333211 111
Q ss_pred ecCCCCeEEEEEccCCCeEEEEE
Q 036953 220 LKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 220 ~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
......+.+++++++|+ +.++.
T Consensus 226 ~~~~~~~~~i~~d~~g~-l~v~~ 247 (300)
T 2qc5_A 226 PTPNARPHAITAGKNSE-IWFTE 247 (300)
T ss_dssp SSTTCCEEEEEECSTTC-EEEEE
T ss_pred CCCCCCceEEEECCCCC-EEEec
Confidence 22456688999999998 44443
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.23 E-value=6.9e-05 Score=83.03 Aligned_cols=209 Identities=13% Similarity=0.089 Sum_probs=127.1
Q ss_pred CCeEEEEeccCCCcCC-----C------CCCeEEEEEcCCCCEEEEEEC--CCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 78 AESLRHLSAKYCPLVP-----P------PRSTIAAAFSPDGRTLASTHG--DHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 78 d~sIrvWd~~t~~L~g-----H------~~~V~sLafSPDG~~LaSGS~--DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
++.|.+||..+.+... . ......++|+|||++++++.. ++.|.++|+.+++.+..+.-- + . ...
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~ 184 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHI 184 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEE
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-cee
Confidence 5678888887664321 1 124557899999999998874 689999999999998888632 1 1 222
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCC-CcEEEEe-cc----CCCe-eEEEEc-CCCcEEEEEcCCeEEEEECCCCCcc-cC
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANT-SECIGSC-DF----YRPI-ASIAFH-AEGELLAVASGHKLYIWPYNNKEEA-SS 215 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~t-g~~v~t~-~h----~s~V-~sVafS-pdG~~LasgSdd~V~IWDlrt~~~~-~~ 215 (792)
+ |.+.+.+++.+.||++.+.++.+ ++.+... .. ..++ ....|. ++|++++++.++.|++.|+...... ..
T Consensus 185 ~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 185 F-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp E-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC
T ss_pred e-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeec
Confidence 3 43567778888999999999976 5543322 11 1122 224664 7888777777778999999765421 11
Q ss_pred CeEEec--------CCCCeEEEEEccCCCeEEEEEeeCccccCCCceeeecCCCcccCCCCceEEEEecCCCEEEEeecc
Q 036953 216 PIIVLK--------TRRSLRAVHFHPHAAPFVLTAEVNDLDSSDSSMTRATSPGYLRYPPPAVFVANAQSGDHVSLAAEL 287 (792)
Q Consensus 216 ~~~~~~--------h~~sVtsVafSPdG~~LlaS~s~~dLrs~d~~~~l~t~sg~~~~p~~~~~l~~~ssG~~~~l~s~l 287 (792)
+..... ....+..+.++|+++.+++......- +..+.+...+.+.+..+.+.+....
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~-------------~~hk~~~~~V~viD~~t~kv~~~i~-- 328 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE-------------WRHKTASRFVVVLDAKTGERLAKFE-- 328 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT-------------TCTTSCEEEEEEEETTTCCEEEEEE--
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccc-------------cccCCCCCEEEEEECCCCeEEEEEE--
Confidence 111000 11233357779999988877643210 0001112234444545555433322
Q ss_pred CcccCCCceEEEeEECCCCc-EEE
Q 036953 288 PLMSSLPFLIVPSVSIDDSR-IDL 310 (792)
Q Consensus 288 ~~l~gh~~~VwdV~~SpDGr-~lv 310 (792)
-...+|.+.+++||+ .|+
T Consensus 329 -----vg~~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 329 -----MGHEIDSINVSQDEKPLLY 347 (386)
T ss_dssp -----EEEEECEEEECSSSSCEEE
T ss_pred -----CCCCcceEEECCCCCeEEE
Confidence 123788999999997 555
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.17 E-value=7.2e-05 Score=83.89 Aligned_cols=97 Identities=12% Similarity=0.038 Sum_probs=73.8
Q ss_pred CeEEEEeccCCCcCC----CCCCeEEEEEcCCCCEEEEEE----------CCCeEEEEECCCCcEEEEecCC-------C
Q 036953 79 ESLRHLSAKYCPLVP----PPRSTIAAAFSPDGRTLASTH----------GDHTVKIIDCQTGNCLKVLSGH-------R 137 (792)
Q Consensus 79 ~sIrvWd~~t~~L~g----H~~~V~sLafSPDG~~LaSGS----------~DGtVrIWDl~tgk~v~~L~gH-------~ 137 (792)
+.|.++|..+.++.+ -..+ .++++||+++|+++. .++.|.++|..+++.+..+.-- .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 577777777654321 1223 899999999998876 3678999999999988777521 2
Q ss_pred CCcEEEEEccCCCCEEEEEeC--CCeEEEEECCCCcEEEEecc
Q 036953 138 RTPWVVRFHPLRSEILASGSL--DHEVRLWDANTSECIGSCDF 178 (792)
Q Consensus 138 ~~VtsVafSP~dg~lLaSgS~--DgtVrLWDl~tg~~v~t~~h 178 (792)
.....+.|+| |+++++.+.. +++|.+.|+.+++.+..+..
T Consensus 177 ~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 177 TYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 3456799999 8888888764 58899999999998887754
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.06 E-value=0.00013 Score=77.62 Aligned_cols=147 Identities=9% Similarity=0.004 Sum_probs=94.9
Q ss_pred CCCeEEEEEcCCCCEEEEE-E---CCCeEEEEECCCCcEEEEecCCC-----------------------------CCcE
Q 036953 95 PRSTIAAAFSPDGRTLAST-H---GDHTVKIIDCQTGNCLKVLSGHR-----------------------------RTPW 141 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSG-S---~DGtVrIWDl~tgk~v~~L~gH~-----------------------------~~Vt 141 (792)
...+..+++++++..++.+ . .++.|.+||+.+++..+.+.+|. ..+.
T Consensus 119 ~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 198 (343)
T 2qe8_A 119 NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN 198 (343)
T ss_dssp TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE
T ss_pred ccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccc
Confidence 3457899999865555444 4 57899999999888766665431 2358
Q ss_pred EEEEccCCCCEEEEEeCCC-eEEEEECC---CCc--------EEEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECC
Q 036953 142 VVRFHPLRSEILASGSLDH-EVRLWDAN---TSE--------CIGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYN 208 (792)
Q Consensus 142 sVafSP~dg~lLaSgS~Dg-tVrLWDl~---tg~--------~v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlr 208 (792)
+++|+| +++.|+.+..++ .+..++.. .+. .+..+........++++++|.++++.. ++.|.+||..
T Consensus 199 gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 199 GIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred eeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 899999 888888777665 44444421 111 011222334567899999998888876 5669999984
Q ss_pred CCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 036953 209 NKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 209 t~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~ 244 (792)
+++.. .............++|.+++..++++...
T Consensus 278 ~G~~~--~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 278 DRAYK--LLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp TTEEE--EEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CCCEE--EEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 44321 11111224568899999998855555433
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.05 E-value=0.00022 Score=75.21 Aligned_cols=169 Identities=12% Similarity=0.059 Sum_probs=115.0
Q ss_pred CcEEEEEeCCCeEEEEeccCCCcCC--CCCCeE--EEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCPLVP--PPRSTI--AAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVV 143 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~L~g--H~~~V~--sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsV 143 (792)
+....+...++.|+.+|..++++.. -..... .+++ ++++|+.. -.++.+.+||..+.+.+.++.-- ..-+++
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL 141 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGL 141 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEE
Confidence 3344444566779999988775432 122333 3444 44455444 46889999999999999988742 333556
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC------CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCC
Q 036953 144 RFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFY------RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSP 216 (792)
Q Consensus 144 afSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~------s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~ 216 (792)
++ +++.|+.+..+++|.++|..+.+.+..+... ..++.+.|. +|++++... ++.|.+.|.++++... .
T Consensus 142 t~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~-~ 216 (268)
T 3nok_A 142 CY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVG-V 216 (268)
T ss_dssp EE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEE-E
T ss_pred ec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEE-E
Confidence 64 4566666666889999999999988887421 256778887 776555553 5679999999988543 1
Q ss_pred eEEe-----------cCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 217 IIVL-----------KTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 217 ~~~~-----------~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
.... ...+-.+.++|+|+++.|+++++.|
T Consensus 217 Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 217 IDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp EECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC
T ss_pred EECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC
Confidence 1111 1234679999999999999999987
No 223
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.00 E-value=8.6e-05 Score=86.26 Aligned_cols=171 Identities=9% Similarity=-0.032 Sum_probs=119.2
Q ss_pred cEEEEEe-CCCeEEEEeccCCCc-----CCCCCCeEEEEE-c-CCCCEEEEEE------------------CCCeEEEEE
Q 036953 70 RGLVSWV-EAESLRHLSAKYCPL-----VPPPRSTIAAAF-S-PDGRTLASTH------------------GDHTVKIID 123 (792)
Q Consensus 70 ~~L~S~s-~d~sIrvWd~~t~~L-----~gH~~~V~sLaf-S-PDG~~LaSGS------------------~DGtVrIWD 123 (792)
..++... .+..|.+.|..+.+. .........+++ + |++++++.++ .++.+.++|
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID 181 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD 181 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEE
Confidence 3444444 456788888877542 123456889998 5 8999998885 245899999
Q ss_pred CCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCC--------------------------------------eEEEE
Q 036953 124 CQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDH--------------------------------------EVRLW 165 (792)
Q Consensus 124 l~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dg--------------------------------------tVrLW 165 (792)
..+.+.+.++.--. ....++++| +++++++.+.+. .|.+.
T Consensus 182 ~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 182 ADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp TTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred CCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 99999888876322 456788999 888888887553 47777
Q ss_pred ECCC--CcE-EEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCc--------ccCCeEEecCCCCeEEEEEc
Q 036953 166 DANT--SEC-IGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEE--------ASSPIIVLKTRRSLRAVHFH 232 (792)
Q Consensus 166 Dl~t--g~~-v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~--------~~~~~~~~~h~~sVtsVafS 232 (792)
|.++ ++. +..+.......++.++|||+++++++ +++|.++|+.+.+. .........-...-..++|+
T Consensus 260 D~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~ 339 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFD 339 (595)
T ss_dssp ECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEEC
T ss_pred eCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEEC
Confidence 8777 444 55665555667899999999999987 56699999986531 00011112223456789999
Q ss_pred cCCCeEEEEEe
Q 036953 233 PHAAPFVLTAE 243 (792)
Q Consensus 233 PdG~~LlaS~s 243 (792)
|+| ++.++..
T Consensus 340 ~dG-~aY~t~~ 349 (595)
T 1fwx_A 340 GRG-NAYTSLF 349 (595)
T ss_dssp TTS-EEEEEET
T ss_pred CCC-eEEEEEe
Confidence 999 6766654
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.97 E-value=0.0002 Score=80.81 Aligned_cols=147 Identities=11% Similarity=0.065 Sum_probs=99.4
Q ss_pred eEEEEEcCCCCEEEEEE-------------------CCCeEEEEECCCCcEEEEecCC--CCCcEEEEE--ccCCCCEEE
Q 036953 98 TIAAAFSPDGRTLASTH-------------------GDHTVKIIDCQTGNCLKVLSGH--RRTPWVVRF--HPLRSEILA 154 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS-------------------~DGtVrIWDl~tgk~v~~L~gH--~~~VtsVaf--SP~dg~lLa 154 (792)
-+.+.|+|+++.+++.. .+.+|.+||+.+++.+.++.-- ......+.| +| ++++++
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aY 268 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGF 268 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEE
Confidence 44688999999888874 3689999999998888877642 134556666 99 777766
Q ss_pred EEe------CCCeEEEEECCCCcE--EEEe--cc-----------------CCCeeEEEEcCCCcEEEEEc--CCeEEEE
Q 036953 155 SGS------LDHEVRLWDANTSEC--IGSC--DF-----------------YRPIASIAFHAEGELLAVAS--GHKLYIW 205 (792)
Q Consensus 155 SgS------~DgtVrLWDl~tg~~--v~t~--~h-----------------~s~V~sVafSpdG~~LasgS--dd~V~IW 205 (792)
.+. .+++|.+|....++. ++.+ .. ......|.+++||++|+++. .+.|.+|
T Consensus 269 V~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavf 348 (462)
T 2ece_A 269 INMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQY 348 (462)
T ss_dssp EEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEE
T ss_pred EEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEE
Confidence 655 567888776655421 1111 00 24578899999999999987 5669999
Q ss_pred ECCCCCcccCCeEE-ecCC---------C----CeEEEEEccCCCeEEEEEeeC
Q 036953 206 PYNNKEEASSPIIV-LKTR---------R----SLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 206 Dlrt~~~~~~~~~~-~~h~---------~----sVtsVafSPdG~~LlaS~s~~ 245 (792)
|+............ .+.. . .-..+.++|||++|+++.+++
T Consensus 349 dV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~ 402 (462)
T 2ece_A 349 DISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLY 402 (462)
T ss_dssp ECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCC
T ss_pred EecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCc
Confidence 98644322211111 1111 1 247789999999999998744
No 225
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.95 E-value=0.00025 Score=74.63 Aligned_cols=160 Identities=9% Similarity=0.081 Sum_probs=107.2
Q ss_pred eEEEEeccCCCcCC---CCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEE
Q 036953 80 SLRHLSAKYCPLVP---PPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILAS 155 (792)
Q Consensus 80 sIrvWd~~t~~L~g---H~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaS 155 (792)
.|+.+|..++++.. -..........++++.|+... .++.+.+||..+.+.+.++.--. .-++++ + +++.|+.
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt--~-dg~~L~~ 141 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLT--H-NDQYLIM 141 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCCEE--E-CSSCEEE
T ss_pred eEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-CceEEe--c-CCCEEEE
Confidence 78888887764321 122333333333456666555 58899999999999999887422 224455 4 4455555
Q ss_pred EeCCCeEEEEECCCCcEEEEecc---C---CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEe--------
Q 036953 156 GSLDHEVRLWDANTSECIGSCDF---Y---RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVL-------- 220 (792)
Q Consensus 156 gS~DgtVrLWDl~tg~~v~t~~h---~---s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~-------- 220 (792)
...+++|.++|..+.+.+..+.. . ..++.+.|. +|+.++..- ++.|.+.|.++++... .....
T Consensus 142 SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~-~Id~~~L~~~~~~ 219 (262)
T 3nol_A 142 SDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTG-IIDLNGILAEAGP 219 (262)
T ss_dssp CCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEE-EEECTTGGGGSCS
T ss_pred ECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEE-EEECCcCcccccc
Confidence 55578899999999988888742 1 345668886 776555553 5679999999988543 11110
Q ss_pred --cCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 221 --KTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 221 --~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
...+-.+.++|+|+++.|+++++.|
T Consensus 220 ~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 220 LPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp CCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 1124679999999999999999987
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.92 E-value=0.00046 Score=72.73 Aligned_cols=161 Identities=11% Similarity=0.037 Sum_probs=107.1
Q ss_pred CCeEEEEeccCCCcC-----CCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC
Q 036953 78 AESLRHLSAKYCPLV-----PPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE 151 (792)
Q Consensus 78 d~sIrvWd~~t~~L~-----gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~ 151 (792)
+..|+++|..++++. +.......+++. ++.|+.+. .++.+.++|..+.+.+..+.--... ...+++ |++
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~-Dg~ 117 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLAT-DGK 117 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEE-CSS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEE-CCC
Confidence 456777777766422 111122345554 55666555 5789999999999999888622122 233455 555
Q ss_pred EEEEEeCCCeEEEEECCCCcEEEEeccC------CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEec---
Q 036953 152 ILASGSLDHEVRLWDANTSECIGSCDFY------RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLK--- 221 (792)
Q Consensus 152 lLaSgS~DgtVrLWDl~tg~~v~t~~h~------s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~--- 221 (792)
.++.+..+++|.++|..+.+.+..+... ..++.+.|. +|+.++... ++.|.+.|..+++... .....+
T Consensus 118 ~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~-~I~~~g~~~ 195 (266)
T 2iwa_A 118 ILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLG-WILLPNLRK 195 (266)
T ss_dssp SEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEE-EEECHHHHH
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEE-EEECCCccc
Confidence 5555557889999999999888887422 246788888 776555543 5679999999988543 111111
Q ss_pred --------CCCCeEEEEEccCCCeEEEEEeeC
Q 036953 222 --------TRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 222 --------h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
.....+.++|+|+++.++++++.|
T Consensus 196 ~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 196 KLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp HHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 114568999999999999999866
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.87 E-value=0.00014 Score=80.63 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=88.8
Q ss_pred EEEcCCCCEEEEEEC-----CCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEe----------CCCeEEEE
Q 036953 101 AAFSPDGRTLASTHG-----DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGS----------LDHEVRLW 165 (792)
Q Consensus 101 LafSPDG~~LaSGS~-----DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS----------~DgtVrLW 165 (792)
....|+++++++... ++.|.++|..+++.+..+..-..+ . +.++| |+++++.+. .++.|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~sp-DG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVAD-DGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECC-CCCEEEEEcccccccccCCCCCEEEEE
Confidence 455689999988876 679999999999999888754444 4 99999 888776664 36789999
Q ss_pred ECCCCcEEEEeccC--------CCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCccc
Q 036953 166 DANTSECIGSCDFY--------RPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEAS 214 (792)
Q Consensus 166 Dl~tg~~v~t~~h~--------s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~ 214 (792)
|..+.+.+..+... .....+.|+|||++|+++. ++.|.++|+.+.+...
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE
Confidence 99999998887432 2466799999999988875 3569999999987543
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.85 E-value=0.0011 Score=68.98 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=107.1
Q ss_pred CeEEEEeccCCCcCC---CCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEE
Q 036953 79 ESLRHLSAKYCPLVP---PPRSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILA 154 (792)
Q Consensus 79 ~sIrvWd~~t~~L~g---H~~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLa 154 (792)
..|+.+|..++++.. -...........++++|+.. -.++.+.+||..+.+.+.++.-- +.-+++++ +++.|+
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt~---dg~~L~ 118 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP-GEGWALTS---DDSHLY 118 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS-SCCCEEEE---CSSCEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC-CCceEEee---CCCEEE
Confidence 367788877664321 11223223233335555554 45889999999999999998743 23355654 344444
Q ss_pred EEeCCCeEEEEECCCCcEEEEeccC------CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEe-------
Q 036953 155 SGSLDHEVRLWDANTSECIGSCDFY------RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVL------- 220 (792)
Q Consensus 155 SgS~DgtVrLWDl~tg~~v~t~~h~------s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~------- 220 (792)
.+..+++|.++|..+.+.+..+... ..++.+.|. +|+.++..- ++.|.+.|.++++... .....
T Consensus 119 vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~-~idl~~l~~~~~ 196 (243)
T 3mbr_X 119 MSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVA-WIDLQALVPDAD 196 (243)
T ss_dssp EECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEE-EEECGGGSTTTT
T ss_pred EECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEE-EEECCcCccccc
Confidence 4455889999999999888887432 356777776 676655553 6679999999988543 11111
Q ss_pred ----cCCCCeEEEEEccCCCeEEEEEeeC
Q 036953 221 ----KTRRSLRAVHFHPHAAPFVLTAEVN 245 (792)
Q Consensus 221 ----~h~~sVtsVafSPdG~~LlaS~s~~ 245 (792)
...+-.+.++|+|+++.|+++++.|
T Consensus 197 ~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 197 ALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp SCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred cccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 1224679999999999999999977
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.68 E-value=3.6e-06 Score=91.54 Aligned_cols=141 Identities=11% Similarity=0.004 Sum_probs=73.7
Q ss_pred CCcEEEEEeCCCeEEEEeccCCCcC---CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCC-CcE-E
Q 036953 68 AKRGLVSWVEAESLRHLSAKYCPLV---PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRR-TPW-V 142 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~~L~---gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~-~Vt-s 142 (792)
.+..++.+..++.+..||..++++. .. +.+.+..+..+++.+++++.|+.|+.||..+|+.+..+..+.. .+. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 4567788888888999998776431 11 3444444556777888888999999999999988777654321 110 0
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCccc
Q 036953 143 VRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEAS 214 (792)
Q Consensus 143 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~ 214 (792)
..+. ++..+++++.|+.|+.||.++|+.++.+..... ..++|++..+++++ ++.|+.||.++++...
T Consensus 87 p~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 87 PCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp SCC-------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred ceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 1111 345678888899999999999999888754432 34566777888777 4569999999887543
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.67 E-value=0.004 Score=65.49 Aligned_cols=138 Identities=13% Similarity=0.071 Sum_probs=91.6
Q ss_pred CeEEEEEcCCCCEEEEEEC---CCeEEEEECCCCcEEEEecC-CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 036953 97 STIAAAFSPDGRTLASTHG---DHTVKIIDCQTGNCLKVLSG-HRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC 172 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~---DGtVrIWDl~tgk~v~~L~g-H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 172 (792)
....+.|++|+ .|+.++. ++.|.++|+.+++.+..+.- ......++.+.. +.+.++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEECCCCcE
Confidence 36799999986 4554442 57999999999998888752 222334566653 45556666789999999999999
Q ss_pred EEEeccC-CCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC---CCCeEEEEEccCCCeEEEEE
Q 036953 173 IGSCDFY-RPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT---RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 173 v~t~~h~-s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h---~~sVtsVafSPdG~~LlaS~ 242 (792)
+.++... ..- ..+++||+.|+++. ++.|.++|..+.+... ....... -..++.+.|. +|. +.+..
T Consensus 99 ~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~-~I~Vg~~~~p~~~~nele~~-dg~-lyvn~ 168 (266)
T 2iwa_A 99 IKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIK-KHNVKYNGHRVIRLNELEYI-NGE-VWANI 168 (266)
T ss_dssp EEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-TTE-EEEEE
T ss_pred EEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEE-EEEECCCCcccccceeEEEE-CCE-EEEec
Confidence 9988654 332 33455777666655 5669999998877543 1111111 1246788888 663 55443
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.65 E-value=0.00067 Score=79.98 Aligned_cols=139 Identities=11% Similarity=0.127 Sum_probs=97.0
Q ss_pred EEcCCC---CEEEEEECCCeEEEEECCCCcEEEEecCCC-----------CCc------------------------EEE
Q 036953 102 AFSPDG---RTLASTHGDHTVKIIDCQTGNCLKVLSGHR-----------RTP------------------------WVV 143 (792)
Q Consensus 102 afSPDG---~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~-----------~~V------------------------tsV 143 (792)
....+| +.++.++.+|.++++|..+|+.+..+.... ..+ ..+
T Consensus 319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~ 398 (677)
T 1kb0_A 319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM 398 (677)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC
T ss_pred ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc
Confidence 333477 678999999999999999999887665211 001 146
Q ss_pred EEccCCCCEEEEEeC-------------------------------------------CCeEEEEECCCCcEEEEeccCC
Q 036953 144 RFHPLRSEILASGSL-------------------------------------------DHEVRLWDANTSECIGSCDFYR 180 (792)
Q Consensus 144 afSP~dg~lLaSgS~-------------------------------------------DgtVrLWDl~tg~~v~t~~h~s 180 (792)
+|+| +..+++.... .+.|..||+.+++.++.+.+..
T Consensus 399 a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 477 (677)
T 1kb0_A 399 SFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS 477 (677)
T ss_dssp EEET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS
T ss_pred eEcC-CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC
Confidence 8888 6667766543 2789999999999999987766
Q ss_pred CeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 181 PIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 181 ~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
++....+..++.++++++ ++.+++||.++++... .....+...-.-+.|..+|+.+++...
T Consensus 478 ~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~~y~~~G~~~v~~~~ 539 (677)
T 1kb0_A 478 PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW--EAPTGTGVVAAPSTYMVDGRQYVSVAV 539 (677)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCcCcceEeCCCEEEEECCCCcEEEEECCCCceee--eeeCCCCcccCCEEEEeCCEEEEEEec
Confidence 666666677777777777 6679999999998653 112223223344567788876655543
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.62 E-value=0.0071 Score=61.43 Aligned_cols=144 Identities=10% Similarity=0.058 Sum_probs=95.6
Q ss_pred CeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q 036953 97 STIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGS 175 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t 175 (792)
.+..++|++++..|+.+. .++.|.++|+..+.....+........++++++.++.++++-...+.|.++|+........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 467899999776666555 5689999999766544444333356789999983455566666678999999875443322
Q ss_pred ecc-CCCeeEEEEcCCCcEEEEEc-C---CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 176 CDF-YRPIASIAFHAEGELLAVAS-G---HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 176 ~~h-~s~V~sVafSpdG~~LasgS-d---d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
... ......++++|++..|+.+. . +.|..+++...... ............+++++++..|+++..
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~---~~~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR---ILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE---EEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE---EEEECCCCCCcEEEEcCCCCEEEEEEC
Confidence 322 25678999999766555544 2 45888888643321 111123345789999999887877664
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.58 E-value=0.0043 Score=65.22 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=91.3
Q ss_pred eEEEEEcCCCCEEEEEECCC--eEEEEECCCCcEEEEecCCCCC-cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE
Q 036953 98 TIAAAFSPDGRTLASTHGDH--TVKIIDCQTGNCLKVLSGHRRT-PWVVRFHPLRSEILASGSLDHEVRLWDANTSECIG 174 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS~DG--tVrIWDl~tgk~v~~L~gH~~~-VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~ 174 (792)
...+.|+ ++..+.+.+.+| .|+++|+.+++.+..+.-.... --++.+. ++++.+..-.++.+.+||..+.+.+.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEE
Confidence 5788998 676666777666 8999999999988887643321 2335554 34555555568999999999999999
Q ss_pred EeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC---CCCeEEEEEccCCCeEEEEE
Q 036953 175 SCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT---RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 175 t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h---~~sVtsVafSPdG~~LlaS~ 242 (792)
++.....-..++ ++++.|+.+. +++|+++|..+.+.... ...... -..++.+.|. +|+ +.+..
T Consensus 122 ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~-I~V~~~g~~~~~lNELe~~-~G~-lyan~ 188 (262)
T 3nol_A 122 SFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRT-ITVTAHGEELPELNELEWV-DGE-IFANV 188 (262)
T ss_dssp EEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEE-EECEETTEECCCEEEEEEE-TTE-EEEEE
T ss_pred EEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEE-EEeccCCccccccceeEEE-CCE-EEEEE
Confidence 997554334444 5676666655 56699999998875541 111111 2445667886 564 55433
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.57 E-value=0.0026 Score=65.50 Aligned_cols=131 Identities=12% Similarity=0.030 Sum_probs=87.1
Q ss_pred CcEEEEEeCCCeEEEEeccCCCc----CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCPL----VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~L----~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVa 144 (792)
+..+|.+..++.+..++.. ++. ..+...+.++...+++. ++.++.++.|..||.. ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 5567777777777777766 321 12233455566666666 5556777888889988 777777765566677777
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEcCCeEEEEEC
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVASGHKLYIWPY 207 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgSdd~V~IWDl 207 (792)
+.+ ++.+++. + +.|..|| .+++.+..+. ....+.++...++|.+.+...++.|..+|.
T Consensus 184 ~d~-~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 184 IGK-DGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP 242 (330)
T ss_dssp ECT-TCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT
T ss_pred EcC-CCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC
Confidence 766 5555443 3 7788888 6777666654 335577778888877666665677888874
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.55 E-value=2.7e-05 Score=84.58 Aligned_cols=133 Identities=13% Similarity=0.083 Sum_probs=69.2
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCC--Cee
Q 036953 106 DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYR--PIA 183 (792)
Q Consensus 106 DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s--~V~ 183 (792)
++..+++++.|+.|+.||..+|+.++.+.. +.+.+..+.. ++.++++++.|+.|+.||..+++.++.+.... .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 678999999999999999999999999886 4555555555 66778888899999999999988776664221 010
Q ss_pred -EEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCcccc
Q 036953 184 -SIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAEVNDLDS 249 (792)
Q Consensus 184 -sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s~~dLrs 249 (792)
+..+. ++..|++++ ++.|+.||.++++... ....+ . ...++|++..+++++.+..+..
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w---~~~~~-~---~~~~~p~~~~v~~~~~dg~v~a 144 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ---TLSSA-F---ADSLSPSTSLLYLGRTEYTITM 144 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEEC
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE---EecCC-C---cccccccCCEEEEEecCCEEEE
Confidence 01111 334555555 5569999999887543 11111 1 2345677777777665444443
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.55 E-value=0.00046 Score=77.33 Aligned_cols=107 Identities=17% Similarity=0.085 Sum_probs=84.8
Q ss_pred CCCCEEEEEECC-----CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEe----------CCCeEEEEECCC
Q 036953 105 PDGRTLASTHGD-----HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGS----------LDHEVRLWDANT 169 (792)
Q Consensus 105 PDG~~LaSGS~D-----GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS----------~DgtVrLWDl~t 169 (792)
++++++++.... +.|.++|+.+++.+..+..-..+ .+.++| |+++++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 478888777653 69999999999999888744444 899999 777777665 467899999999
Q ss_pred CcEEEEeccC--------CCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCccc
Q 036953 170 SECIGSCDFY--------RPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEAS 214 (792)
Q Consensus 170 g~~v~t~~h~--------s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~ 214 (792)
++.+..+... .....+.|+|||++|+++. ++.|.++|+.+.+...
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~ 214 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR 214 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE
Confidence 9998887532 3456789999999999876 3459999999987543
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.54 E-value=0.0085 Score=62.69 Aligned_cols=143 Identities=10% Similarity=0.108 Sum_probs=89.7
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC-----CCCCcEEEEEccCCCCEEEEEeC-------------
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG-----HRRTPWVVRFHPLRSEILASGSL------------- 158 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g-----H~~~VtsVafSP~dg~lLaSgS~------------- 158 (792)
.+..+++.++...|+.+...+.|..+|..+++. ..+.. .......+++.+.+++++++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 578999998334566666566688888775542 22221 12356789998734566665432
Q ss_pred ----CCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEc
Q 036953 159 ----DHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFH 232 (792)
Q Consensus 159 ----DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafS 232 (792)
++.|..||..+++...........+.++|+++|++|+++. .++|++|++....... ......... ...+++.
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~~~g-P~gi~~d 237 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVKIPN-PGNIKRN 237 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEECSS-EEEEEEC
T ss_pred ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEeCCC-CCCeEEC
Confidence 3678889988776544333334567899999998776664 4679999987542211 111111223 6789999
Q ss_pred cCCCeEEEEE
Q 036953 233 PHAAPFVLTA 242 (792)
Q Consensus 233 PdG~~LlaS~ 242 (792)
++|+.+++..
T Consensus 238 ~~G~l~va~~ 247 (322)
T 2fp8_A 238 ADGHFWVSSS 247 (322)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEec
Confidence 9998555443
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.48 E-value=0.0026 Score=67.02 Aligned_cols=138 Identities=8% Similarity=-0.012 Sum_probs=92.7
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC 176 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~ 176 (792)
....+.|+ ++..+.+.+.+|.|+++|+.+++.+..+....-.--++.+. ++++....-.++.+.+||..+.+.+.++
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 35788887 45566677778899999999999877762111122346654 3566666667899999999999999999
Q ss_pred ccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC---CCCeEEEEEccCCCeEEEEE
Q 036953 177 DFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT---RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 177 ~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h---~~sVtsVafSPdG~~LlaS~ 242 (792)
.....-..++ ++++.|+.+. +++|+++|..+.+.... ...... -..++.+.|. +|+ +.+..
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~-I~V~~~g~~v~~lNeLe~~-dG~-lyanv 197 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGA-VQVKLRGQPVELINELECA-NGV-IYANI 197 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEE-EECEETTEECCCEEEEEEE-TTE-EEEEE
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEE-EEeCCCCcccccccccEEe-CCE-EEEEE
Confidence 7654445555 4677776665 56699999988875541 111112 2346778887 664 55433
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.47 E-value=0.0036 Score=73.91 Aligned_cols=135 Identities=13% Similarity=0.149 Sum_probs=92.0
Q ss_pred CCC---EEEEEECCCeEEEEECCCCcEEEEecCCC-C--------------------------------------CcEEE
Q 036953 106 DGR---TLASTHGDHTVKIIDCQTGNCLKVLSGHR-R--------------------------------------TPWVV 143 (792)
Q Consensus 106 DG~---~LaSGS~DGtVrIWDl~tgk~v~~L~gH~-~--------------------------------------~VtsV 143 (792)
+|+ .++.++.+|.++++|..+|+.+....-.. . .-..+
T Consensus 315 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~ 394 (689)
T 1yiq_A 315 DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPM 394 (689)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCC
T ss_pred CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcc
Confidence 565 78899999999999999999875432110 0 01126
Q ss_pred EEccCCCCEEEEEeC---------------------------------------------CCeEEEEECCCCcEEEEecc
Q 036953 144 RFHPLRSEILASGSL---------------------------------------------DHEVRLWDANTSECIGSCDF 178 (792)
Q Consensus 144 afSP~dg~lLaSgS~---------------------------------------------DgtVrLWDl~tg~~v~t~~h 178 (792)
+|+| +..+++.... +++|+.||+.+++.++.+..
T Consensus 395 a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~ 473 (689)
T 1yiq_A 395 SYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY 473 (689)
T ss_dssp EEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE
T ss_pred eECC-CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC
Confidence 7888 6666665522 37899999999999999876
Q ss_pred CCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 179 YRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 179 ~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
..+...-.+...+.+++.++ ++.|+.||.++++... .........-.-+.|..+|+.+++...
T Consensus 474 ~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 474 VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW--EQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCccCccceECCCEEEEECCCCcEEEEECCCCccce--eeeCCCCcccCceEEEECCEEEEEEEe
Confidence 65555445666777888777 5669999999998653 111222222344677888886665443
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.39 E-value=0.0032 Score=74.93 Aligned_cols=185 Identities=13% Similarity=0.052 Sum_probs=104.1
Q ss_pred eeeeEEee-CCCceEeecCCCceeecCCcEEEEEeCCCeEEEEeccCC-CcC-CCC-CCeEEEEEcCCCCEEEEEECC--
Q 036953 43 YVPKRQWV-DASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHLSAKYC-PLV-PPP-RSTIAAAFSPDGRTLASTHGD-- 116 (792)
Q Consensus 43 ~V~s~aWs-pd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-~L~-gH~-~~V~sLafSPDG~~LaSGS~D-- 116 (792)
.+....|+ |++++++... +.+ +.+...|++++..++ ... ... .....++|+|||+.|+....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~------~~~-----G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSV------DMS-----GNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEE------ESS-----SSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEE------eCC-----CCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCC
Confidence 34556777 7776654431 100 012235788887766 421 111 112368899999988887765
Q ss_pred ---CeEEEEECCCCcE--EEEec-CCCCCcEEEEEccCCCCEEEEEeC---CCeEEEEECCCC--cE--EEEec-cCCCe
Q 036953 117 ---HTVKIIDCQTGNC--LKVLS-GHRRTPWVVRFHPLRSEILASGSL---DHEVRLWDANTS--EC--IGSCD-FYRPI 182 (792)
Q Consensus 117 ---GtVrIWDl~tgk~--v~~L~-gH~~~VtsVafSP~dg~lLaSgS~---DgtVrLWDl~tg--~~--v~t~~-h~s~V 182 (792)
..|+++++.+++. ...+. ........+.|+| |+++|+..+. ...|.++|+.++ +. ..... .....
T Consensus 244 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 322 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR 322 (751)
T ss_dssp CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC
T ss_pred CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce
Confidence 3688889887642 33333 2334567889999 8887776553 346888999875 33 22222 34455
Q ss_pred eEEEEcCCCcEEEEEcCC-----eEEEEECCCCCcccCCeEEecCCC--CeEEEEEccCCCeEEEEEe
Q 036953 183 ASIAFHAEGELLAVASGH-----KLYIWPYNNKEEASSPIIVLKTRR--SLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 183 ~sVafSpdG~~LasgSdd-----~V~IWDlrt~~~~~~~~~~~~h~~--sVtsVafSPdG~~LlaS~s 243 (792)
.++.|+..+.+++.+..+ +|..+|+.+..... . .+..+.. .+..+. ++++.|+++..
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~-~-~li~~~~~~~l~~~~--~~~~~lv~~~~ 386 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWS-H-VLVDHSEDVFMESIA--VRSNYLVVAGR 386 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCC-C-EEECCCSSEEEEEEE--ECSSEEEEEEE
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccce-e-eEECCCCCcEEEEEE--EECCEEEEEEE
Confidence 666665545555554432 48888876532111 1 0222333 344444 45666766654
No 241
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.38 E-value=0.17 Score=52.57 Aligned_cols=177 Identities=13% Similarity=0.139 Sum_probs=99.6
Q ss_pred ceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeE-EEEeccCCCcCCCCCCeEEEEEcCCCCEEEEEECC-C-e
Q 036953 42 KYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESL-RHLSAKYCPLVPPPRSTIAAAFSPDGRTLASTHGD-H-T 118 (792)
Q Consensus 42 k~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sI-rvWd~~t~~L~gH~~~V~sLafSPDG~~LaSGS~D-G-t 118 (792)
.....++|++++++..+. .....++....++.+ ..|.. ...+..++++++|+.+++.... + .
T Consensus 32 ~~pegia~~~~g~lyv~d-------~~~~~I~~~d~~g~~~~~~~~--------~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTN-------HEVGEIVSITPDGNQQIHATV--------EGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEECTTSCEEEEE-------TTTTEEEEECTTCCEEEEEEC--------SSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEe-------CCCCeEEEECCCCceEEEEeC--------CCCceeEEEcCCCcEEEEeccCCcce
Confidence 456678888887654332 123344444433332 23322 2358899999999966655433 2 4
Q ss_pred EEEEECCCCcEEEEec-CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE-EEEe----------ccCCCeeEEE
Q 036953 119 VKIIDCQTGNCLKVLS-GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC-IGSC----------DFYRPIASIA 186 (792)
Q Consensus 119 VrIWDl~tgk~v~~L~-gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~-v~t~----------~h~s~V~sVa 186 (792)
|..+|..+++...... ........++..+ ++..+++-..++.|..+|..+++. +... ......+.+
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 6677877777543332 1223445666655 555555555688999999876532 2111 111234566
Q ss_pred EcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCe
Q 036953 187 FHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAP 237 (792)
Q Consensus 187 fSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~ 237 (792)
++++++|+++. .++|+.||+.............. ......++++++|+.
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNL 225 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCE
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCE
Confidence 78888777665 45699999875221111111111 123456788888873
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.35 E-value=0.0041 Score=73.43 Aligned_cols=144 Identities=15% Similarity=0.098 Sum_probs=93.3
Q ss_pred CCcEEEEEeCCCeEEEEeccCCCcC-----C-CCCCeEEEEEcC---CCCEEEEEE------CCCeEEEEECCCCcEEEE
Q 036953 68 AKRGLVSWVEAESLRHLSAKYCPLV-----P-PPRSTIAAAFSP---DGRTLASTH------GDHTVKIIDCQTGNCLKV 132 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~~L~-----g-H~~~V~sLafSP---DG~~LaSGS------~DGtVrIWDl~tgk~v~~ 132 (792)
.+.+++....++.|..+|.+++++. . +......+..+| ++ .++.+. .++.|+.||..+|+.+..
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 3457778888899999998877432 1 111111112222 44 444443 378999999999999988
Q ss_pred ecCCC-------------------------------CCcEEEEEccCCCCEEEEEeCCCe-------------------E
Q 036953 133 LSGHR-------------------------------RTPWVVRFHPLRSEILASGSLDHE-------------------V 162 (792)
Q Consensus 133 L~gH~-------------------------------~~VtsVafSP~dg~lLaSgS~Dgt-------------------V 162 (792)
+..-. .....+.+.| +..+++.++.++. |
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 75210 0012578888 7788888887764 9
Q ss_pred EEEECCCCcEEEEeccC----------CCeeEEEEcCCCc---EEEEEc-CCeEEEEECCCCCcc
Q 036953 163 RLWDANTSECIGSCDFY----------RPIASIAFHAEGE---LLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 163 rLWDl~tg~~v~t~~h~----------s~V~sVafSpdG~---~LasgS-dd~V~IWDlrt~~~~ 213 (792)
..||.++|+.++.+... ....-.....+|+ .++.++ ++.|+++|.++++.+
T Consensus 278 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 99999999999887421 1222222233564 677776 556999999998854
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.31 E-value=0.0052 Score=72.41 Aligned_cols=145 Identities=12% Similarity=0.041 Sum_probs=93.8
Q ss_pred CCcEEEEEeCCCeEEEEeccCCCcC----CC-C-CCeEEEEEcC--CCCEEEEEEC------CCeEEEEECCCCcEEEEe
Q 036953 68 AKRGLVSWVEAESLRHLSAKYCPLV----PP-P-RSTIAAAFSP--DGRTLASTHG------DHTVKIIDCQTGNCLKVL 133 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~~L~----gH-~-~~V~sLafSP--DG~~LaSGS~------DGtVrIWDl~tgk~v~~L 133 (792)
.+.+++....++.|..+|..++++. .+ . .....+.-+| .+..++.++. ++.|+.||..+|+.+..+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3567777788888999998877431 11 0 0000011111 2445555543 789999999999999888
Q ss_pred cCCCCC--------------------------------cEEEEEccCCCCEEEEEeCCC-------------------eE
Q 036953 134 SGHRRT--------------------------------PWVVRFHPLRSEILASGSLDH-------------------EV 162 (792)
Q Consensus 134 ~gH~~~--------------------------------VtsVafSP~dg~lLaSgS~Dg-------------------tV 162 (792)
...... ...++++| +..+++.++.++ .|
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 643211 12478888 677888777654 59
Q ss_pred EEEECCCCcEEEEeccC----------CCeeEEEEcCCC---cEEEEEc-CCeEEEEECCCCCcc
Q 036953 163 RLWDANTSECIGSCDFY----------RPIASIAFHAEG---ELLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 163 rLWDl~tg~~v~t~~h~----------s~V~sVafSpdG---~~LasgS-dd~V~IWDlrt~~~~ 213 (792)
..+|.++++.++.+... ....-+....+| +.++.++ ++.|+++|.++++.+
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 99999999999887421 112223334477 5677777 555999999998754
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.26 E-value=0.065 Score=63.48 Aligned_cols=171 Identities=8% Similarity=0.005 Sum_probs=114.9
Q ss_pred ecCCcEEEEEeCCCeEEEEeccCCCcC------------CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEe
Q 036953 66 RDAKRGLVSWVEAESLRHLSAKYCPLV------------PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVL 133 (792)
Q Consensus 66 ~d~~~~L~S~s~d~sIrvWd~~t~~L~------------gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L 133 (792)
.+.+..+|.+..++-|..|+..++++. -....|.++...++++.|..|+.++-|.+||..+++.....
T Consensus 364 ~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 364 EDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp ECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred ECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 355677899888877888887655321 01356999999888886777787777999998887644332
Q ss_pred c----CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------cCCCeeEEEEcCCCcEEEEEcCCeE
Q 036953 134 S----GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-------FYRPIASIAFHAEGELLAVASGHKL 202 (792)
Q Consensus 134 ~----gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-------h~s~V~sVafSpdG~~LasgSdd~V 202 (792)
. .....|.++...+ ++.+.+.. . +.+.+||..+++...... ....|.++..+++|.+.+... ++|
T Consensus 444 ~~~~~l~~~~v~~i~~d~-~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl 519 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDG-EGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGL 519 (795)
T ss_dssp TTTSCCSCSCEEEEEECS-SSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCE
T ss_pred cCCCCcCCCeeEEEEECC-CCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cce
Confidence 2 1345788998887 66655544 4 458999998876543321 135689999999998777665 669
Q ss_pred EEEECCCCCcccCC---eEEecCCCCeEEEEEccCCCeEEEE
Q 036953 203 YIWPYNNKEEASSP---IIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 203 ~IWDlrt~~~~~~~---~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
..||..+.+. ... ....-....|.++...++|...+.+
T Consensus 520 ~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 520 SVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred EEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 9999866542 100 0000124578999999988855544
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.23 E-value=0.097 Score=62.01 Aligned_cols=172 Identities=9% Similarity=0.010 Sum_probs=115.0
Q ss_pred cCCcEEEEEeCCCeEEEEeccCCCcC---------C-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC-
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYCPLV---------P-PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG- 135 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~~L~---------g-H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g- 135 (792)
|.+..+|.+..++-|..++.....+. + ....|.++...++|+.. .|+.++-|..||..+++.......
T Consensus 318 D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~ 396 (795)
T 4a2l_A 318 DSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQE 396 (795)
T ss_dssp CTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC-
T ss_pred eCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCC
Confidence 45677888888777888876544321 0 23459999999888744 577776799999887764433211
Q ss_pred -------CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----cCCCeeEEEEcCCCcEEEEEcCCeEE
Q 036953 136 -------HRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-----FYRPIASIAFHAEGELLAVASGHKLY 203 (792)
Q Consensus 136 -------H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-----h~s~V~sVafSpdG~~LasgSdd~V~ 203 (792)
....|.++...+ ++++|..|+.++-|.+||..+++...... ....|.++...++|.+.+... ++|.
T Consensus 397 ~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~ 474 (795)
T 4a2l_A 397 DESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALV 474 (795)
T ss_dssp -----CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEE
T ss_pred CCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Ccee
Confidence 235788998887 67746667777889999998876544321 245789999988888766655 5699
Q ss_pred EEECCCCCcccCCeE---EecCCCCeEEEEEccCCCeEEEE
Q 036953 204 IWPYNNKEEASSPII---VLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 204 IWDlrt~~~~~~~~~---~~~h~~sVtsVafSPdG~~LlaS 241 (792)
+||..+.+....... ..-....|.++...++|...+.+
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 475 RFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 999876543210000 00123578899998888855443
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.16 E-value=0.09 Score=54.59 Aligned_cols=136 Identities=14% Similarity=0.089 Sum_probs=89.3
Q ss_pred CeEEEEEcCCCCEEEEEECC--CeEEEEECCCCcEEEEecCCCC-CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 036953 97 STIAAAFSPDGRTLASTHGD--HTVKIIDCQTGNCLKVLSGHRR-TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI 173 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~D--GtVrIWDl~tgk~v~~L~gH~~-~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v 173 (792)
-+..+.|+. +..+.+.+.+ ..|+++|+.+++.+..+.-... .--++.+. ++++....-.++.+.+||..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 467899985 5555555554 4899999999998888763322 22345554 3555566667899999999999999
Q ss_pred EEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecC---CCCeEEEEEccCCCeEEE
Q 036953 174 GSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKT---RRSLRAVHFHPHAAPFVL 240 (792)
Q Consensus 174 ~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h---~~sVtsVafSPdG~~Lla 240 (792)
.++.....-..++ ++++.|+.+. +++|+++|..+.+.... .....+ -..++.+.|. +|+ +.+
T Consensus 99 ~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~-I~V~~~g~~~~~lNeLe~~-~G~-lya 164 (243)
T 3mbr_X 99 ARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGS-IKVTAGGRPLDNLNELEWV-NGE-LLA 164 (243)
T ss_dssp EEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEE-EECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred EEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEE-EEEccCCcccccceeeEEe-CCE-EEE
Confidence 9997655445565 4566555554 56699999998875441 111111 2356677776 554 443
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.14 E-value=0.19 Score=52.31 Aligned_cols=148 Identities=8% Similarity=0.102 Sum_probs=97.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEE-EEECCCeEEEEECCCCcEEEEecC-CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC
Q 036953 91 LVPPPRSTIAAAFSPDGRTLA-STHGDHTVKIIDCQTGNCLKVLSG-HRRTPWVVRFHPLRSEILASGSLDHEVRLWDAN 168 (792)
Q Consensus 91 L~gH~~~V~sLafSPDG~~La-SGS~DGtVrIWDl~tgk~v~~L~g-H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~ 168 (792)
+.+-.+.+..++|+|+++.|+ +...++.|...|.. ++.++.+.- -....-+|++.+ ++.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcC
Confidence 445556799999999766555 57778899999987 887777642 224578899988 77777776677889999876
Q ss_pred CCcE---EEEec-------cCCCeeEEEEcCCCcEEEEEcCC---eEEEEECC-CCCcccCCeEEe-------cCCCCeE
Q 036953 169 TSEC---IGSCD-------FYRPIASIAFHAEGELLAVASGH---KLYIWPYN-NKEEASSPIIVL-------KTRRSLR 227 (792)
Q Consensus 169 tg~~---v~t~~-------h~s~V~sVafSpdG~~LasgSdd---~V~IWDlr-t~~~~~~~~~~~-------~h~~sVt 227 (792)
.... +.... .+..+..++|+|+++.|+++... .|+.|+-. .... ..... .....+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~---l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE---LHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC---CEEEECHHHHHTCCSSCCC
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc---eeeecchhhccccccCCce
Confidence 5432 22221 23456899999999877777632 25555510 1111 11111 1234578
Q ss_pred EEEEccCCCeEEEEEe
Q 036953 228 AVHFHPHAAPFVLTAE 243 (792)
Q Consensus 228 sVafSPdG~~LlaS~s 243 (792)
+++++|....+++.+.
T Consensus 177 ~l~~dp~tg~lliLS~ 192 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSH 192 (255)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred eEEEcCCCCeEEEEEC
Confidence 9999998777766654
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.14 E-value=0.05 Score=56.80 Aligned_cols=141 Identities=7% Similarity=0.057 Sum_probs=91.2
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC--------------------CCCCcEEEEEccCCCCEEEEE
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG--------------------HRRTPWVVRFHPLRSEILASG 156 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g--------------------H~~~VtsVafSP~dg~lLaSg 156 (792)
...+++|+++++.++++..++.|..||..+++.. .+.. ....+.++++.+ +...|+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-QNNQLYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-TTTEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcC-CCCcEEEE
Confidence 3567889999987888888999999998765432 2221 113578899986 33445555
Q ss_pred eCCCeEEEEECCCCcEEEEec-----cCCCeeEEEEcC-CCcEEEEEcC------------------CeEEEEECCCCCc
Q 036953 157 SLDHEVRLWDANTSECIGSCD-----FYRPIASIAFHA-EGELLAVASG------------------HKLYIWPYNNKEE 212 (792)
Q Consensus 157 S~DgtVrLWDl~tg~~v~t~~-----h~s~V~sVafSp-dG~~LasgSd------------------d~V~IWDlrt~~~ 212 (792)
...+.|..+|..+++...... .....+.+++.+ +|++.++... +.|..||..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 555668889987654322111 123578899999 9987776532 3488998866542
Q ss_pred ccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 213 ASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 213 ~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
.. ........+.++|+|+|+.++++..
T Consensus 178 ~~----~~~~~~~p~gia~~~dg~~lyv~d~ 204 (322)
T 2fp8_A 178 TL----LLKELHVPGGAEVSADSSFVLVAEF 204 (322)
T ss_dssp EE----EEEEESCCCEEEECTTSSEEEEEEG
T ss_pred EE----eccCCccCcceEECCCCCEEEEEeC
Confidence 21 1111233467899999997766643
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.12 E-value=0.045 Score=55.40 Aligned_cols=155 Identities=8% Similarity=-0.005 Sum_probs=93.4
Q ss_pred CCCeEEEEeccCCC---cC-CCCCCeEEEEEcCCCCEEEEEEC---CCeEEEEECCCCcEEEEecCCCCCcEEEEEccCC
Q 036953 77 EAESLRHLSAKYCP---LV-PPPRSTIAAAFSPDGRTLASTHG---DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLR 149 (792)
Q Consensus 77 ~d~sIrvWd~~t~~---L~-gH~~~V~sLafSPDG~~LaSGS~---DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~d 149 (792)
..+.|.+++..... +. ........++++|++..|+.+.. .+.|..++++................++++++++
T Consensus 99 ~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTT
T ss_pred CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCC
Confidence 34566666654321 11 11245789999997776666654 3688888876433222222333567899999933
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecC-CCCe
Q 036953 150 SEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKT-RRSL 226 (792)
Q Consensus 150 g~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h-~~sV 226 (792)
+.++++-...+.|..+|+........+........++.. +..|+++. ++.|.++|..+++... ..... ....
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~---~i~~g~~~~p 253 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMD---TFHPHKQTRL 253 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEE---EECCSSCCCC
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceE---EEcccccccc
Confidence 445566667789999999765443333333445667654 44555544 4669999998876432 22222 2246
Q ss_pred EEEEEccCCC
Q 036953 227 RAVHFHPHAA 236 (792)
Q Consensus 227 tsVafSPdG~ 236 (792)
..+++.|++.
T Consensus 254 ~gi~~~~~~~ 263 (267)
T 1npe_A 254 YGITIALSQC 263 (267)
T ss_dssp CCEEEECSCC
T ss_pred ceeeecCccC
Confidence 6788888765
No 250
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.06 E-value=0.0044 Score=73.71 Aligned_cols=143 Identities=13% Similarity=0.060 Sum_probs=90.4
Q ss_pred CCCC-CeEEEEEc-CCCCEEEEEEC-CC----eEEEEECCCC-cEEE-EecCCCCCcEEEEEccCCCCEEEEEeCC----
Q 036953 93 PPPR-STIAAAFS-PDGRTLASTHG-DH----TVKIIDCQTG-NCLK-VLSGHRRTPWVVRFHPLRSEILASGSLD---- 159 (792)
Q Consensus 93 gH~~-~V~sLafS-PDG~~LaSGS~-DG----tVrIWDl~tg-k~v~-~L~gH~~~VtsVafSP~dg~lLaSgS~D---- 159 (792)
+|.- .+...+|| |||++|+.+.. +| +|+++|+.++ +.+. .+. .....+.|+| |++.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGP-DHTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECS-STTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEec-CCCEEEEEEECCCCC
Confidence 3443 57889999 99998886543 22 5999999988 6321 111 1134688999 77777766655
Q ss_pred -CeEEEEECCCCcE--EEEe--ccCCCeeEEEEcCCCcEEEEEc-C--C-eEEEEECCCCCcccCC--eEEec-CCCCeE
Q 036953 160 -HEVRLWDANTSEC--IGSC--DFYRPIASIAFHAEGELLAVAS-G--H-KLYIWPYNNKEEASSP--IIVLK-TRRSLR 227 (792)
Q Consensus 160 -gtVrLWDl~tg~~--v~t~--~h~s~V~sVafSpdG~~LasgS-d--d-~V~IWDlrt~~~~~~~--~~~~~-h~~sVt 227 (792)
..|.++++.+++. ...+ ........+.|+|||++|+..+ . . .|+++|+.++... . ..+.. ......
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~--~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH--NTLEIVRPREKGVRY 323 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC--CCEEESSCCCTTCCE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC--ceeEEeecCCCCceE
Confidence 3688889987642 2333 2334567889999999888765 2 2 3999999875311 1 12222 334556
Q ss_pred EEEEccCCCeEEEEE
Q 036953 228 AVHFHPHAAPFVLTA 242 (792)
Q Consensus 228 sVafSPdG~~LlaS~ 242 (792)
++.|+. |+.|+..+
T Consensus 324 s~~~~~-g~~l~~~t 337 (751)
T 2xe4_A 324 DVQMHG-TSHLVILT 337 (751)
T ss_dssp EEEEET-TTEEEEEE
T ss_pred EEeeee-CCEEEEEe
Confidence 666654 55555554
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.06 E-value=0.11 Score=54.76 Aligned_cols=162 Identities=11% Similarity=0.055 Sum_probs=101.2
Q ss_pred CeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCC----CcEEEEecCCCCCcEEEEEccCCC
Q 036953 79 ESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQT----GNCLKVLSGHRRTPWVVRFHPLRS 150 (792)
Q Consensus 79 ~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~t----gk~v~~L~gH~~~VtsVafSP~dg 150 (792)
..|+..+..... +......+..++|++++..|+.+. .++.|..+++.. ......+...-....++++.+.++
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 345566555432 222345678999998766665554 568999999876 222333333334568899986355
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc-C--CeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 151 EILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS-G--HKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 151 ~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS-d--d~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
+++++-..++.|.+.|+........+. .......++++|.+..|+.+. + ++|..+++...... ......-..-
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~---~~~~~~~~~P 166 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQWP 166 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE---EEECSSCSCE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE---EEEECCCCCc
Confidence 666666778899999987654433332 345678999998666555544 2 46888888644321 1112234567
Q ss_pred EEEEEccCCCeEEEEEe
Q 036953 227 RAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 227 tsVafSPdG~~LlaS~s 243 (792)
+.++|++++..|+.+..
T Consensus 167 ~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDS 183 (316)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred eEEEEeccCCEEEEEEC
Confidence 89999998887877653
No 252
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.00 E-value=0.053 Score=59.13 Aligned_cols=165 Identities=9% Similarity=-0.003 Sum_probs=108.4
Q ss_pred eCCCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC
Q 036953 76 VEAESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE 151 (792)
Q Consensus 76 s~d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~ 151 (792)
.....|+.++..... +......+..++|++....|+.. ...+.|..+++..+.....+........++++.+.++.
T Consensus 93 ~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ 172 (386)
T 3v65_B 93 ANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK 172 (386)
T ss_dssp ECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTE
T ss_pred ecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCe
Confidence 344567777765442 22234558899999866655554 45788999998876654444433345678899874566
Q ss_pred EEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc--C-CeEEEEECCCCCcccCCeEEecCCCCeE
Q 036953 152 ILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS--G-HKLYIWPYNNKEEASSPIIVLKTRRSLR 227 (792)
Q Consensus 152 lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS--d-d~V~IWDlrt~~~~~~~~~~~~h~~sVt 227 (792)
++++-...+.|.+.++........+. .......++++|.+..|+.+. . ++|+.+++...... ......-..-+
T Consensus 173 lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~~~~Pn 249 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---IIADTHLFWPN 249 (386)
T ss_dssp EEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEE
T ss_pred EEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE---EEEECCCCCee
Confidence 66776777889999987654333332 335678999998777666554 3 45888888654421 12223344578
Q ss_pred EEEEccCCCeEEEEEe
Q 036953 228 AVHFHPHAAPFVLTAE 243 (792)
Q Consensus 228 sVafSPdG~~LlaS~s 243 (792)
.++|+|++..|+.+-.
T Consensus 250 Glavd~~~~~lY~aD~ 265 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEEEEGGGTEEEEEET
T ss_pred eEEEeCCCCEEEEEEC
Confidence 9999998887877653
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.98 E-value=0.0099 Score=61.09 Aligned_cols=158 Identities=11% Similarity=-0.028 Sum_probs=101.9
Q ss_pred cCCcEEEEEeCCCeEEEEeccCCCc----CCCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEE
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYCPL----VPPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWV 142 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~~L----~gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~Vts 142 (792)
+.+..+|.+..++.|..++.. +.+ ......+.++.+.+++..++. + +.|..|| .+++....+......+.+
T Consensus 145 ~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~ 219 (330)
T 3hxj_A 145 SEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTR 219 (330)
T ss_dssp CTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSC
T ss_pred cCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceec
Confidence 446668888777888888876 421 223345667777777775554 4 7799999 778877777766677888
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-CCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEec
Q 036953 143 VRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDF-YRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVLK 221 (792)
Q Consensus 143 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h-~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~~ 221 (792)
+...+ ++. +..++.++.+..+|. +++.+..+.. ...+..+...+++.+.+...++.|..+|. +++... ....
T Consensus 220 ~~~~~-~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~---~~~~ 292 (330)
T 3hxj_A 220 PAISE-DGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW---NFET 292 (330)
T ss_dssp CEECT-TSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEE---EEEC
T ss_pred eEECC-CCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEE---EEEc
Confidence 88887 554 555677888988884 5666666543 23344566666776655555667999995 444221 1222
Q ss_pred CCCCeEEEEEccCCC
Q 036953 222 TRRSLRAVHFHPHAA 236 (792)
Q Consensus 222 h~~sVtsVafSPdG~ 236 (792)
....+.++...++|.
T Consensus 293 ~~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 293 GSWIIATPVIDENGT 307 (330)
T ss_dssp SSCCCSCCEECTTCC
T ss_pred CCccccceEEcCCCE
Confidence 334455666666666
No 254
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.95 E-value=0.0056 Score=65.10 Aligned_cols=103 Identities=6% Similarity=-0.017 Sum_probs=72.3
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCe---
Q 036953 106 DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPI--- 182 (792)
Q Consensus 106 DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V--- 182 (792)
++..++.++.++.|..+|..+++.+..+............. +..++.++.++.|..+|..+++.++.+.....+
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee
Confidence 56788889999999999999999988877544332223332 357778889999999999999998887544332
Q ss_pred ---eEEEEcCCCcEEEEEc-CCeEEEEECCCCCcc
Q 036953 183 ---ASIAFHAEGELLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 183 ---~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~ 213 (792)
...... ++ .++++. ++.|..+|.++++..
T Consensus 179 ~~~~~~~~~-~~-~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 179 RGESAPTTA-FG-AAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp CCCCCCEEE-TT-EEEECCTTTEEEEEETTTCCEE
T ss_pred cCCCCcEEE-CC-EEEEEcCCCEEEEEECCCCcEE
Confidence 122222 34 455555 667999999888743
No 255
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.94 E-value=0.0068 Score=64.43 Aligned_cols=133 Identities=14% Similarity=0.088 Sum_probs=87.3
Q ss_pred CcEEEEEeCCCeEEEEeccCCCcCC--CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEecC-CCCCcEEEEE
Q 036953 69 KRGLVSWVEAESLRHLSAKYCPLVP--PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLSG-HRRTPWVVRF 145 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~L~g--H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~g-H~~~VtsVaf 145 (792)
+..++.+..++.+..++..++++.- .......+.. ++..++.++.++.|..+|..+++.+..... ....+.....
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 316 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL 316 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE
Confidence 4567777777888888887664321 1223444444 467888889999999999999998887762 2223333343
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEecc-CCCeeEEEEcCCCcEEEEEcCCeEEEEE
Q 036953 146 HPLRSEILASGSLDHEVRLWDANTSECIGSCDF-YRPIASIAFHAEGELLAVASGHKLYIWP 206 (792)
Q Consensus 146 SP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h-~s~V~sVafSpdG~~LasgSdd~V~IWD 206 (792)
. +..|+.++.++.|.++|..+++.+..+.. ...+.......++.+++.+.++.|+.||
T Consensus 317 ~---~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 Y---NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp E---TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred E---CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 3 36788888999999999999998887754 3333221111244444444466688887
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.85 E-value=0.1 Score=56.00 Aligned_cols=164 Identities=9% Similarity=0.002 Sum_probs=106.0
Q ss_pred CCCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCE
Q 036953 77 EAESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEI 152 (792)
Q Consensus 77 ~d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~l 152 (792)
....|+..+..... +......+..++|++....|+... ..+.|..+++..+.....+........++++.+.++.+
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 34446666654332 122234578999998666665554 57889999988766444444333456789998745666
Q ss_pred EEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc--C-CeEEEEECCCCCcccCCeEEecCCCCeEE
Q 036953 153 LASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS--G-HKLYIWPYNNKEEASSPIIVLKTRRSLRA 228 (792)
Q Consensus 153 LaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS--d-d~V~IWDlrt~~~~~~~~~~~~h~~sVts 228 (792)
+++-...+.|.+.++........+ ........++++|.+..|+.+. . ++|+.+++....... .....-..-+.
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnG 207 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNG 207 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---SCCSSCSCEEE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCcce
Confidence 677777889999998765433333 2335678999999766655554 3 559999886543211 11123345689
Q ss_pred EEEccCCCeEEEEEe
Q 036953 229 VHFHPHAAPFVLTAE 243 (792)
Q Consensus 229 VafSPdG~~LlaS~s 243 (792)
++|+|++..|..+-.
T Consensus 208 la~d~~~~~lY~aD~ 222 (349)
T 3v64_C 208 LTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEEETTTTEEEEEET
T ss_pred EEEeCCCCEEEEEEC
Confidence 999998887877653
No 257
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.35 Score=57.03 Aligned_cols=167 Identities=11% Similarity=0.034 Sum_probs=111.1
Q ss_pred cCCcEEEEEeCCCeEEEEeccCCCcC-------CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec--CCC
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYCPLV-------PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS--GHR 137 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~~L~-------gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~--gH~ 137 (792)
+.+..+|.+..++-|..++..+..+. .....|.++...+++...+ |+.++-+..+|..+++...... ...
T Consensus 371 d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~ 449 (781)
T 3v9f_A 371 DGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNEL 449 (781)
T ss_dssp CTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCC
T ss_pred cCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCC
Confidence 45577888887777888877654221 1235689999888777554 6766678899987775433221 134
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-c-----CCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCC
Q 036953 138 RTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-F-----YRPIASIAFHAEGELLAVASGHKLYIWPYNNKE 211 (792)
Q Consensus 138 ~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h-----~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~ 211 (792)
..|.++...+ ++.+.+ ++. +-|..||..+++...... . ...|.++...++|.+.+...+++|..||.++.+
T Consensus 450 ~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 450 LDVRVFYEDK-NKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp CCEEEEEECT-TSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE
T ss_pred CeEEEEEECC-CCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence 6788888876 555444 455 569999988766543322 1 357899999999987776655669999986654
Q ss_pred cccCCeEEe-c---CCCCeEEEEEccCCCeEEEE
Q 036953 212 EASSPIIVL-K---TRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 212 ~~~~~~~~~-~---h~~sVtsVafSPdG~~LlaS 241 (792)
... .. . ....|.++...++|...+.+
T Consensus 527 ~~~----~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 527 VRK----FNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp EEE----ECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred EEE----ccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 211 11 1 24578999999999855554
No 258
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.72 E-value=0.0029 Score=69.38 Aligned_cols=89 Identities=13% Similarity=-0.045 Sum_probs=72.2
Q ss_pred eEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEe----------CCCeEEEEECCCCcEEEEeccC--------
Q 036953 118 TVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGS----------LDHEVRLWDANTSECIGSCDFY-------- 179 (792)
Q Consensus 118 tVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS----------~DgtVrLWDl~tg~~v~t~~h~-------- 179 (792)
+|.++|..+++.+..+..-..+ .+.++| |+++++.+. .+++|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 8889999999999988744445 799999 777777775 4789999999999999988532
Q ss_pred CCeeEEEEcCCCcEEEEEc---CCeEEE--EECCC
Q 036953 180 RPIASIAFHAEGELLAVAS---GHKLYI--WPYNN 209 (792)
Q Consensus 180 s~V~sVafSpdG~~LasgS---dd~V~I--WDlrt 209 (792)
.....+.++|||++|+++. ++.|.+ +|..+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 3456899999999999886 244888 99866
No 259
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.68 E-value=0.2 Score=54.95 Aligned_cols=167 Identities=10% Similarity=0.042 Sum_probs=110.1
Q ss_pred EEEeCCCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCC----cEEEEecCCCCCcEEEE
Q 036953 73 VSWVEAESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTG----NCLKVLSGHRRTPWVVR 144 (792)
Q Consensus 73 ~S~s~d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tg----k~v~~L~gH~~~VtsVa 144 (792)
+.......|+..+..... +......+..++|++....|+... ..+.|+.+++... .....+........+++
T Consensus 86 ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp EEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred eEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 333445678887776442 334456789999999666665554 5688999998752 23334443445678899
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEEe
Q 036953 145 FHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIVL 220 (792)
Q Consensus 145 fSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~~ 220 (792)
+.+.+++++++-...+.|.+.|+........+. .......|+++|.+.+|+.+. .++|+..++...... ....
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~---~~~~ 242 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVT 242 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE---EEEC
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE---EEEE
Confidence 987456666776778899999998765544443 445678999999766666554 245999998655422 1222
Q ss_pred cCCCCeEEEEEccCCCeEEEEE
Q 036953 221 KTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 221 ~h~~sVtsVafSPdG~~LlaS~ 242 (792)
..-..-+.+++++++..|+.+-
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEEEEeCCCEEEEEE
Confidence 2335678999999888787764
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.56 E-value=0.046 Score=64.21 Aligned_cols=136 Identities=11% Similarity=0.167 Sum_probs=85.2
Q ss_pred CCCC---EEEEEECCCeEEEEECCCCcEEEEecCCC------------CCc------------------------EEEEE
Q 036953 105 PDGR---TLASTHGDHTVKIIDCQTGNCLKVLSGHR------------RTP------------------------WVVRF 145 (792)
Q Consensus 105 PDG~---~LaSGS~DGtVrIWDl~tgk~v~~L~gH~------------~~V------------------------tsVaf 145 (792)
.+|+ .++.++.+|.++++|..+|+.+..++... .++ ..+++
T Consensus 309 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~ 388 (668)
T 1kv9_A 309 IDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSF 388 (668)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEE
T ss_pred cCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceE
Confidence 3665 68889999999999999999875443211 000 12577
Q ss_pred ccCCCCEEEEE------------------------------------eCCCeEEEEECCCCcEEEEeccCCCeeEEEEcC
Q 036953 146 HPLRSEILASG------------------------------------SLDHEVRLWDANTSECIGSCDFYRPIASIAFHA 189 (792)
Q Consensus 146 SP~dg~lLaSg------------------------------------S~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSp 189 (792)
+| +..+++.. ..++.|..||+.+++.++.+..........+..
T Consensus 389 dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t 467 (668)
T 1kv9_A 389 NP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLST 467 (668)
T ss_dssp ET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE
T ss_pred CC-CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEe
Confidence 77 44444431 124789999999999998886555554444555
Q ss_pred CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 190 EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 190 dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
.+.++++++ ++.|+.||.++++... .........-.-+.+..+|+.+++.+.
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l~--~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEALW--QFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCcccchhhhhhcChhhe--EecCCCCcccCceEEEECCEEEEEEEe
Confidence 677777777 5669999999988543 111111111123445567775555443
No 261
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.42 E-value=0.03 Score=65.18 Aligned_cols=144 Identities=13% Similarity=0.117 Sum_probs=94.3
Q ss_pred eEEEEEcCCCCEEEEEECCC--------------------------------------eEEEEECCC--CcE-EEEecCC
Q 036953 98 TIAAAFSPDGRTLASTHGDH--------------------------------------TVKIIDCQT--GNC-LKVLSGH 136 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS~DG--------------------------------------tVrIWDl~t--gk~-v~~L~gH 136 (792)
...++++|||+++++.+.+. .|.|.|..+ ++. +..+..
T Consensus 197 pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv- 275 (595)
T 1fwx_A 197 LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI- 275 (595)
T ss_dssp CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-
T ss_pred ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-
Confidence 34577999999999888543 366777766 444 444432
Q ss_pred CCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCc------------EEEEeccCCCeeEEEEcCCCcEEEEEc--CCe
Q 036953 137 RRTPWVVRFHPLRSEILASGS-LDHEVRLWDANTSE------------CIGSCDFYRPIASIAFHAEGELLAVAS--GHK 201 (792)
Q Consensus 137 ~~~VtsVafSP~dg~lLaSgS-~DgtVrLWDl~tg~------------~v~t~~h~s~V~sVafSpdG~~LasgS--dd~ 201 (792)
.....++.++| |+++++.++ .+.+|.++|+.+.+ .+...........++|+++| .+++.. ++.
T Consensus 276 g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsq 353 (595)
T 1fwx_A 276 ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQ 353 (595)
T ss_dssp ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTE
T ss_pred CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCc
Confidence 23456799999 888766655 68899999998653 45556667788999999999 666655 677
Q ss_pred EEEEECCCCC------cccCCe-EEecCCCC--e---EEEEEccCCCeEEEEEee
Q 036953 202 LYIWPYNNKE------EASSPI-IVLKTRRS--L---RAVHFHPHAAPFVLTAEV 244 (792)
Q Consensus 202 V~IWDlrt~~------~~~~~~-~~~~h~~s--V---tsVafSPdG~~LlaS~s~ 244 (792)
|.+||+.... ...... ....|-.+ . ..+.++|||++|+++++.
T Consensus 354 V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 354 VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 9999997621 111011 11112111 1 123457999988888763
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.42 E-value=0.82 Score=53.88 Aligned_cols=169 Identities=4% Similarity=-0.040 Sum_probs=109.8
Q ss_pred ecCCcEEEEEeCCCeEEEEeccCCCcC-------------CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Q 036953 66 RDAKRGLVSWVEAESLRHLSAKYCPLV-------------PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKV 132 (792)
Q Consensus 66 ~d~~~~L~S~s~d~sIrvWd~~t~~L~-------------gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~ 132 (792)
.|....+|.+..++-|..++.....+. -....|.++...++|+.. .|+.++-|.+||..+++....
T Consensus 320 ~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~ 398 (781)
T 3v9f_A 320 QDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYN 398 (781)
T ss_dssp ECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC
T ss_pred EeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEc
Confidence 466778999887777888877644321 023469999998887644 556555588899765432211
Q ss_pred e---cCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---cCCCeeEEEEcCCCcEEEEEcCCeEEEEE
Q 036953 133 L---SGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD---FYRPIASIAFHAEGELLAVASGHKLYIWP 206 (792)
Q Consensus 133 L---~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~---h~s~V~sVafSpdG~~LasgSdd~V~IWD 206 (792)
. ......|.++...+ ++.+.+ |+.++-+..+|..+++...... ....|.++...++|.+.+... ++|.+||
T Consensus 399 ~~~~~~~~~~v~~i~~d~-~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~ 475 (781)
T 3v9f_A 399 KENRELLSNSVLCSLKDS-EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVID 475 (781)
T ss_dssp -----CCCSBEEEEEECT-TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEE
T ss_pred cCCCCCCCcceEEEEECC-CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEe
Confidence 1 12345688888876 555544 6777789999988776443321 246788999888887666554 6799999
Q ss_pred CCCCCcccCCeEEecC-----CCCeEEEEEccCCCeEEEE
Q 036953 207 YNNKEEASSPIIVLKT-----RRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 207 lrt~~~~~~~~~~~~h-----~~sVtsVafSPdG~~LlaS 241 (792)
..+.+... ..... ...|.++...++|...+.+
T Consensus 476 ~~~~~~~~---~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 476 LASKKVIH---HYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp SSSSSCCE---EECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCCeEEe---cccCcccccccceeEEEEEcCCCCEEEEE
Confidence 87765321 11111 3578899998888855544
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.37 E-value=0.051 Score=60.33 Aligned_cols=142 Identities=11% Similarity=0.163 Sum_probs=88.9
Q ss_pred CeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeC-CC----eEEEEECCCC
Q 036953 97 STIAAAFSP-DGRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSL-DH----EVRLWDANTS 170 (792)
Q Consensus 97 ~V~sLafSP-DG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~-Dg----tVrLWDl~tg 170 (792)
....++++| ++..|+.+...+.|+.+|+.+++..... ........++|++ ++++|+.+.. ++ .+...+. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 467899998 4666777666588999999876644433 3455688999999 7775554443 22 2333443 33
Q ss_pred cEE--EEeccCCCeeEEEEcC-CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 171 ECI--GSCDFYRPIASIAFHA-EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 171 ~~v--~t~~h~s~V~sVafSp-dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
... ..+........++++| +|.++++-. .++|+.||........ .........-+.++|+|+|++|+++..
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~--~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP--LFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE--EEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE--EEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 221 2232334567788999 666555544 5679999987654211 111222345678999999997776654
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.31 E-value=0.077 Score=61.15 Aligned_cols=136 Identities=13% Similarity=0.070 Sum_probs=86.0
Q ss_pred CCCC---EEEEEECCCeEEEEECCCCcEEEEecCCC-------------CCc--------------------------EE
Q 036953 105 PDGR---TLASTHGDHTVKIIDCQTGNCLKVLSGHR-------------RTP--------------------------WV 142 (792)
Q Consensus 105 PDG~---~LaSGS~DGtVrIWDl~tgk~v~~L~gH~-------------~~V--------------------------ts 142 (792)
.+|+ .++.++.+|.++++|..+|+.+..+.-.. .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4674 56788899999999999999887764221 111 23
Q ss_pred EEEccCCCCEEEEEe-------------------------------------CCCeEEEEECCCCcEEEEeccCCCeeEE
Q 036953 143 VRFHPLRSEILASGS-------------------------------------LDHEVRLWDANTSECIGSCDFYRPIASI 185 (792)
Q Consensus 143 VafSP~dg~lLaSgS-------------------------------------~DgtVrLWDl~tg~~v~t~~h~s~V~sV 185 (792)
++++| +..+++... .++.|..||+.+++.++.+.....+...
T Consensus 391 ~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~ 469 (571)
T 2ad6_A 391 DSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGG 469 (571)
T ss_dssp CEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSB
T ss_pred ceECC-CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccce
Confidence 57777 555555443 3578999999999999888655444433
Q ss_pred EEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 186 AFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 186 afSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
.+...+.++++++ ++.|+.||.++++... .........-..+.+..+|+.++.+..
T Consensus 470 ~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 470 TLYTKGGLVWYATLDGYLKALDNKDGKELW--NFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp CEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eEEECCCEEEEEcCCCeEEEEECCCCCEEE--EEeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 3333455556666 6679999999988653 111111111122346678875555443
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.26 E-value=0.081 Score=58.66 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=90.3
Q ss_pred CcEEEEEeCCCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEECC-C----eEEEEECCCCcEE--EEecCCCC
Q 036953 69 KRGLVSWVEAESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTHGD-H----TVKIIDCQTGNCL--KVLSGHRR 138 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS~D-G----tVrIWDl~tgk~v--~~L~gH~~ 138 (792)
+..|+.....+.|+.++...+. +.........++|++++++|+.+... + .+.+++. .+... ..+. ...
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~ 226 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQ 226 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECS
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCC
Confidence 4566666655778888876542 22344568899999999977776642 1 3433443 23211 2232 123
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--ccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCC
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC--DFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNN 209 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~--~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt 209 (792)
...+++++|.++.++++-..++.|..+|..++...... ........++|+|+|++|+++. .+.|+.++...
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 45678999966677777667889999999876543322 2334578999999999666664 55699988754
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.22 E-value=0.53 Score=50.41 Aligned_cols=161 Identities=10% Similarity=0.036 Sum_probs=96.9
Q ss_pred eCCCeEEEEeccCCC---c-CCCCCCeEEEEEcCCCCEEE-EEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCC
Q 036953 76 VEAESLRHLSAKYCP---L-VPPPRSTIAAAFSPDGRTLA-STHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRS 150 (792)
Q Consensus 76 s~d~sIrvWd~~t~~---L-~gH~~~V~sLafSPDG~~La-SGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg 150 (792)
...+.|..++..... + .........+++.+.+..|+ +-...+.|.+.+++.......+...-....+++++|.++
T Consensus 92 ~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g 171 (349)
T 3v64_C 92 VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG 171 (349)
T ss_dssp TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT
T ss_pred ccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC
Confidence 345566666654332 1 11223457889998555554 445568899999876544444444445678999998555
Q ss_pred CEEEEEeCC-CeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 151 EILASGSLD-HEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 151 ~lLaSgS~D-gtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
.++++-..+ +.|..+++.......... .-...+.+++++++..|+.+. .+.|..+|+...... .........-
T Consensus 172 ~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~---~~~~~~~~~P 248 (349)
T 3v64_C 172 TIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AVISQGLPHP 248 (349)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECSSCSSE
T ss_pred eEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE---EEEeCCCCCc
Confidence 555565555 788888887543332222 334578999998877777665 456999998754321 1222223345
Q ss_pred EEEEEccCCCeEEEE
Q 036953 227 RAVHFHPHAAPFVLT 241 (792)
Q Consensus 227 tsVafSPdG~~LlaS 241 (792)
..+++. +..++.+
T Consensus 249 ~giav~--~~~ly~t 261 (349)
T 3v64_C 249 FAITVF--EDSLYWT 261 (349)
T ss_dssp EEEEEE--TTEEEEE
T ss_pred eEEEEE--CCEEEEe
Confidence 666662 3345444
No 267
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.20 E-value=0.18 Score=55.19 Aligned_cols=193 Identities=13% Similarity=0.112 Sum_probs=114.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEeeecccceeeC-CCCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEeC--CCeE
Q 036953 5 SWPHDQNSLRSQPSNHLRRRARNVSRLLAHREIS-PKTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVE--AESL 81 (792)
Q Consensus 5 ~w~~~~~~~~~~~~~s~~s~~r~V~~l~~~rels-~~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~--d~sI 81 (792)
.|+...+...+.....-++....||++ ..+++. ....+++.+...+..++ +.. .-...+++... .++|
T Consensus 31 vw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l---~g~-----~~dla~as~R~~~~n~l 101 (355)
T 3amr_A 31 IWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPL---NGK-----KVDIAAASNRSEGKNTI 101 (355)
T ss_dssp EECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEE---TTE-----EEEEEEEEECSTTCCEE
T ss_pred EecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEeccccc---CCc-----eEeEEEEeCCCCCCCeE
Confidence 355443333333333345678889988 444444 22245555544443110 100 00011222233 4677
Q ss_pred EEEec--cCCCcCC---------CC-CCeEEEEE--cC-CCC-EEEEEECCCeEEEEECC-------CCcEEEEecCCCC
Q 036953 82 RHLSA--KYCPLVP---------PP-RSTIAAAF--SP-DGR-TLASTHGDHTVKIIDCQ-------TGNCLKVLSGHRR 138 (792)
Q Consensus 82 rvWd~--~t~~L~g---------H~-~~V~sLaf--SP-DG~-~LaSGS~DGtVrIWDl~-------tgk~v~~L~gH~~ 138 (792)
+++++ .+.++.. .. ..++.+++ ++ .++ ++++...+|.+..|++. +.+.++.|. -..
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgs 180 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNS 180 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSS
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCC
Confidence 77754 3332211 11 45666777 77 454 67788889999999882 335667776 345
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECC-----CCcEEEEecc---CCCeeEEEE--cCCCc-EEEEEc--CCeEEEE
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDAN-----TSECIGSCDF---YRPIASIAF--HAEGE-LLAVAS--GHKLYIW 205 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~-----tg~~v~t~~h---~s~V~sVaf--SpdG~-~LasgS--dd~V~IW 205 (792)
.+..+...+ ....|+.+-+|.-|..+|.+ +++.+..+.. ...+..|+. .++++ +|++++ ++.+.+|
T Consensus 181 q~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 181 QTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp CEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred CcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 788899988 77888889999877777755 3456665532 246888887 45555 677666 5669999
Q ss_pred ECC
Q 036953 206 PYN 208 (792)
Q Consensus 206 Dlr 208 (792)
|..
T Consensus 260 dr~ 262 (355)
T 3amr_A 260 DRQ 262 (355)
T ss_dssp ESS
T ss_pred ECC
Confidence 986
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.18 E-value=0.14 Score=59.26 Aligned_cols=134 Identities=9% Similarity=0.112 Sum_probs=84.1
Q ss_pred CCCC---EEEEEECCCeEEEEECCCCcEEEEecCCCC--Cc---------------------------------------
Q 036953 105 PDGR---TLASTHGDHTVKIIDCQTGNCLKVLSGHRR--TP--------------------------------------- 140 (792)
Q Consensus 105 PDG~---~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~--~V--------------------------------------- 140 (792)
.+|+ .++.++.+|.++++|..+|+.+..+..... ..
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 4674 678899999999999999998877653210 00
Q ss_pred ----EEEEEccCCCCEEEEEe---------------------------------CCCeEEEEECCCCcEEEEeccCCCee
Q 036953 141 ----WVVRFHPLRSEILASGS---------------------------------LDHEVRLWDANTSECIGSCDFYRPIA 183 (792)
Q Consensus 141 ----tsVafSP~dg~lLaSgS---------------------------------~DgtVrLWDl~tg~~v~t~~h~s~V~ 183 (792)
..++++| +..+++... .++.|..||+.+++.++.+....++.
T Consensus 411 g~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~ 489 (582)
T 1flg_A 411 GKNWNPMAYSQ-DTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLW 489 (582)
T ss_dssp SSCSSCCEECT-TTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCC
T ss_pred ccCCCCceECC-CCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCc
Confidence 1245666 333333322 26889999999999998876444333
Q ss_pred EEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCe--EEEEEccCCCeEEEEEe
Q 036953 184 SIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSL--RAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 184 sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sV--tsVafSPdG~~LlaS~s 243 (792)
.-.....+.+++.++ ++.|+.||.++++... .......+ .-+.|..+|+.+++...
T Consensus 490 ~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW----~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 490 AGVLATAGNLVFTGTGDGYFKAFDAKSGKELW----KFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp SCCEEETTTEEEEECTTSEEEEEETTTCCEEE----EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ccceEeCCCEEEEECCCCcEEEEECCCCCEEE----EecCCCCcccCceEEEECCEEEEEEEc
Confidence 222222455666666 6679999999998653 22212222 23567778875555443
No 269
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.09 E-value=0.019 Score=63.01 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=70.1
Q ss_pred EEEcCCCCEEEEEEC---------CCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC-EEEEEe-CCCeEEEEECCC
Q 036953 101 AAFSPDGRTLASTHG---------DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE-ILASGS-LDHEVRLWDANT 169 (792)
Q Consensus 101 LafSPDG~~LaSGS~---------DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~-lLaSgS-~DgtVrLWDl~t 169 (792)
++|++|+++++++.. ++.+.++|+.+++.+..+.... ...++.|+| |++ ++++.. .+++|.++|+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQ-DGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECC-SSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECC-CCCEEEEEccCCCCeEEEEECCC
Confidence 689999998887643 2356699999999888886433 578999999 665 677777 699999999999
Q ss_pred CcEEEEeccCCCeeEEEEcC
Q 036953 170 SECIGSCDFYRPIASIAFHA 189 (792)
Q Consensus 170 g~~v~t~~h~s~V~sVafSp 189 (792)
++.+.++.-......+++++
T Consensus 347 ~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 347 DQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp CEEEEECCCCSCCCEEECCC
T ss_pred CcEEEEEECCCCCCEEEeec
Confidence 99999998777777777654
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.09 E-value=0.26 Score=57.83 Aligned_cols=144 Identities=15% Similarity=0.111 Sum_probs=91.2
Q ss_pred CcEEEEEeCCCeEEEEeccCCCcC----C-CCCCeEEEEEcC--CCCEEEEEEC------CCeEEEEECCCCcEEEEecC
Q 036953 69 KRGLVSWVEAESLRHLSAKYCPLV----P-PPRSTIAAAFSP--DGRTLASTHG------DHTVKIIDCQTGNCLKVLSG 135 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~L~----g-H~~~V~sLafSP--DG~~LaSGS~------DGtVrIWDl~tgk~v~~L~g 135 (792)
+.+++....++.|..+|..++++. . .......+..+| .+..++++.. ++.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 456777777888888888776431 1 000001111112 2345555543 58999999999999988852
Q ss_pred CC---C----------------------------CcEEEEEccCCCCEEEEEeCCC-------------------eEEEE
Q 036953 136 HR---R----------------------------TPWVVRFHPLRSEILASGSLDH-------------------EVRLW 165 (792)
Q Consensus 136 H~---~----------------------------~VtsVafSP~dg~lLaSgS~Dg-------------------tVrLW 165 (792)
.. . ....+++.+ +..+++.++.++ .|..+
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 0 012367888 667888877665 39999
Q ss_pred ECCCCcEEEEeccC----------CCeeEEEEcCCCc---EEEEEc-CCeEEEEECCCCCcc
Q 036953 166 DANTSECIGSCDFY----------RPIASIAFHAEGE---LLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 166 Dl~tg~~v~t~~h~----------s~V~sVafSpdG~---~LasgS-dd~V~IWDlrt~~~~ 213 (792)
|.++++.++.+... .+.....+..+|+ .++.++ ++.++++|..+++..
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 99999999888532 2333333334665 566666 556999999998754
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.00 E-value=0.56 Score=48.77 Aligned_cols=114 Identities=14% Similarity=0.197 Sum_probs=78.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC---CCcEEEEec-------CCCCCcEEEEEccCCCCEEEEEeCCCeE
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQ---TGNCLKVLS-------GHRRTPWVVRFHPLRSEILASGSLDHEV 162 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~---tgk~v~~L~-------gH~~~VtsVafSP~dg~lLaSgS~DgtV 162 (792)
........++|+|+++.|+++.......||.++ ..+.+..+. .+...+.+++++|..+++++.....+.+
T Consensus 118 ~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L 197 (255)
T 3qqz_A 118 PTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRAL 197 (255)
T ss_dssp CCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred cccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeE
Confidence 345668999999998888877765555555543 112223221 1344678999999777788888888899
Q ss_pred EEEECCCCcEEEEeccC----------CCeeEEEEcCCCcEEEEEcCCeEEEEEC
Q 036953 163 RLWDANTSECIGSCDFY----------RPIASIAFHAEGELLAVASGHKLYIWPY 207 (792)
Q Consensus 163 rLWDl~tg~~v~t~~h~----------s~V~sVafSpdG~~LasgSdd~V~IWDl 207 (792)
..+|.. ++.+..+.-. .....|+|.++|++++++-.+-++.+.-
T Consensus 198 ~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 198 QEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred EEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 999976 5566655322 3678999999998666654554666643
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.00 E-value=0.42 Score=51.92 Aligned_cols=161 Identities=9% Similarity=0.014 Sum_probs=95.0
Q ss_pred CCCeEEEEeccCCC---c-CCCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCC
Q 036953 77 EAESLRHLSAKYCP---L-VPPPRSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSE 151 (792)
Q Consensus 77 ~d~sIrvWd~~t~~---L-~gH~~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~ 151 (792)
..+.|..++..... + .........+++++.+..|+.. ...+.|.+.+++.......+...-....++++.|.++.
T Consensus 136 ~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 136 TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 44556666554331 1 1112345678888855555444 45678988888755444444444466799999984555
Q ss_pred EEEEEeCC-CeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCeE
Q 036953 152 ILASGSLD-HEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSLR 227 (792)
Q Consensus 152 lLaSgS~D-gtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sVt 227 (792)
++++-..+ +.|..+++......... ..-...+.++|++++..|+.+. .+.|..+|+...... ...........
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~---~~~~~~~~~P~ 292 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AVISQGLPHPF 292 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE---EEECSSCSSEE
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE---EEEECCCCCce
Confidence 55555445 78888888754433333 2334578999998877776665 455999998654321 12222233456
Q ss_pred EEEEccCCCeEEEEE
Q 036953 228 AVHFHPHAAPFVLTA 242 (792)
Q Consensus 228 sVafSPdG~~LlaS~ 242 (792)
.+++ ++..++.+.
T Consensus 293 giav--~~~~ly~td 305 (386)
T 3v65_B 293 AITV--FEDSLYWTD 305 (386)
T ss_dssp EEEE--ETTEEEEEE
T ss_pred EEEE--ECCEEEEee
Confidence 6666 233454443
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.00 E-value=0.27 Score=54.59 Aligned_cols=139 Identities=15% Similarity=0.148 Sum_probs=86.0
Q ss_pred CcEEEEEeCCCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEECCC----e-EEEEECCCCcE-EEEecCCCCC
Q 036953 69 KRGLVSWVEAESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTHGDH----T-VKIIDCQTGNC-LKVLSGHRRT 139 (792)
Q Consensus 69 ~~~L~S~s~d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS~DG----t-VrIWDl~tgk~-v~~L~gH~~~ 139 (792)
+..||.....+.|+.++...+. +.........++|+++|+ |+.+...+ . +...+...+.. ...+. ....
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~ 229 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG 229 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence 3566666554778888875553 233445689999999999 55554321 2 33333322211 11222 2344
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-c--cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCC
Q 036953 140 PWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-D--FYRPIASIAFHAEGELLAVAS--GHKLYIWPYNN 209 (792)
Q Consensus 140 VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~--h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt 209 (792)
..+++++|.++.++++-..++.|+.+|..++.....+ . .......++|+|+|++|+++. .+.|+.+|+..
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 5678899856666666667889999999877663322 2 222334799999999666665 45699988763
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.96 E-value=0.9 Score=46.99 Aligned_cols=141 Identities=10% Similarity=-0.008 Sum_probs=83.1
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCcE-EEEec---------CCCCCcEEEEEccCCCC-EEEEEeCCCeEEEEE
Q 036953 98 TIAAAFSPDGRTLASTHGDHTVKIIDCQTGNC-LKVLS---------GHRRTPWVVRFHPLRSE-ILASGSLDHEVRLWD 166 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~-v~~L~---------gH~~~VtsVafSP~dg~-lLaSgS~DgtVrLWD 166 (792)
...++..+++..+++-..++.|.++|..+++. +.... +.-.....+ ++ +++ ++++-...+.|..+|
T Consensus 119 ~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYVSNTEKMLLLRIP 195 (306)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEEEETTTTEEEEEE
T ss_pred cCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEEEeCCCCEEEEEE
Confidence 34555555554444444588899999876531 22111 111234556 77 555 555556778999999
Q ss_pred CCC-CcE--EEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEc---cCCCeEE
Q 036953 167 ANT-SEC--IGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFH---PHAAPFV 239 (792)
Q Consensus 167 l~t-g~~--v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafS---PdG~~Ll 239 (792)
+.. ++. ...+........++++++|+++++.. .++|.++|.. ++... ...........++++|. |+++.|+
T Consensus 196 ~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~-~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 196 VDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTI-IAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp BCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEE-EECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred eCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEE-EeecccccCCceEEEEecccCCCCEEE
Confidence 874 321 11222124567789999998766654 4569999975 33210 00011123568899999 8988888
Q ss_pred EEEe
Q 036953 240 LTAE 243 (792)
Q Consensus 240 aS~s 243 (792)
++..
T Consensus 274 Vt~~ 277 (306)
T 2p4o_A 274 VVTN 277 (306)
T ss_dssp EEEC
T ss_pred EECC
Confidence 7775
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.92 E-value=1.2 Score=46.64 Aligned_cols=115 Identities=10% Similarity=-0.022 Sum_probs=76.1
Q ss_pred CCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCC-CeEEEEECCCCcEE
Q 036953 96 RSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLD-HEVRLWDANTSECI 173 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~D-gtVrLWDl~tg~~v 173 (792)
.....+++++.+..|+.+ ...+.|.++|+........+........+++++|.++.++++.... +.|...++......
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~ 156 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence 345788998755555544 5678999999875544444443445778999998444444554333 68888888643322
Q ss_pred EEe-ccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCC
Q 036953 174 GSC-DFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNK 210 (792)
Q Consensus 174 ~t~-~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~ 210 (792)
... ..-...+.+++++++..|+.+. .+.|..+|+...
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 222 2345678999999887777665 456999999753
No 276
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.86 E-value=0.14 Score=55.44 Aligned_cols=143 Identities=10% Similarity=0.140 Sum_probs=94.1
Q ss_pred eEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEE-ecC----CC--CCcEEEEE---ccCCCCEEEEEe---------
Q 036953 98 TIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKV-LSG----HR--RTPWVVRF---HPLRSEILASGS--------- 157 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~-L~g----H~--~~VtsVaf---SP~dg~lLaSgS--------- 157 (792)
-.+++|.+....|+.++ ..++|..||...+..... +.+ .. ..+.++.| .| ++.+++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccccc
Confidence 45789988666777666 689999999976644333 322 11 13578999 68 666766543
Q ss_pred ----CCCeEEEEECC---CCcEEEEecc--------------CCCeeEEEEcCCCcEEEEEc-C-CeEEEEECCCCCccc
Q 036953 158 ----LDHEVRLWDAN---TSECIGSCDF--------------YRPIASIAFHAEGELLAVAS-G-HKLYIWPYNNKEEAS 214 (792)
Q Consensus 158 ----~DgtVrLWDl~---tg~~v~t~~h--------------~s~V~sVafSpdG~~LasgS-d-d~V~IWDlrt~~~~~ 214 (792)
.+..|..+|+. +++.+..... ....+.++..++|+..++.+ . +.|..++.......
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~- 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS- 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE-
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe-
Confidence 16789999999 7776655431 12478999999999888877 4 55666666543211
Q ss_pred CCeEEec----CCCCeEEEEEccCCCeEEEEEe
Q 036953 215 SPIIVLK----TRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 215 ~~~~~~~----h~~sVtsVafSPdG~~LlaS~s 243 (792)
...... .....+.++++|+|+.|++...
T Consensus 173 -~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 173 -TFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp -EEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred -eeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 111111 1223679999999998877654
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.85 E-value=0.15 Score=59.39 Aligned_cols=84 Identities=7% Similarity=-0.042 Sum_probs=50.8
Q ss_pred CCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCC
Q 036953 158 LDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAA 236 (792)
Q Consensus 158 ~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~ 236 (792)
.++.|..||+.+++.++......+...-...-.+.+++.++ ++.|+.||.++++... ...........-+.|..+|+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW--~~~l~~g~~~~P~~y~~~G~ 528 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLW--KFKIPSGAIGYPMTYTHKGT 528 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEE--EeeCCCCcEeccEEEEeCCE
Confidence 34789999999999998885443332211222455555566 6679999999998654 11122222223355667887
Q ss_pred eEEEEEe
Q 036953 237 PFVLTAE 243 (792)
Q Consensus 237 ~LlaS~s 243 (792)
.+++...
T Consensus 529 qyv~~~~ 535 (599)
T 1w6s_A 529 QYVAIYY 535 (599)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 5555443
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.85 E-value=0.29 Score=51.93 Aligned_cols=163 Identities=11% Similarity=0.024 Sum_probs=101.4
Q ss_pred CCeEEEEeccCCC-----cCCCCCCeEEEEEcCCCCEEE-EEECCCeEEEEECCCCcE-EEEecCCCCCcEEEEEccCCC
Q 036953 78 AESLRHLSAKYCP-----LVPPPRSTIAAAFSPDGRTLA-STHGDHTVKIIDCQTGNC-LKVLSGHRRTPWVVRFHPLRS 150 (792)
Q Consensus 78 d~sIrvWd~~t~~-----L~gH~~~V~sLafSPDG~~La-SGS~DGtVrIWDl~tgk~-v~~L~gH~~~VtsVafSP~dg 150 (792)
...|+.++..... +......+..++|++....|+ +-...+.|..+++..+.. ...+...-....++++.+.++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4456666665331 011123466889998555554 444578899999876632 222222234567899987466
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 151 EILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 151 ~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
.++++-...+.|.++++........+ ........++++|.+..|+.+. ..+|+.+++...... ......-..-
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~l~~P 168 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIYWP 168 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE---EEEECCCCCc
Confidence 66677667889999998765433333 3445678999998766555554 345888888654321 1122233456
Q ss_pred EEEEEccCCCeEEEEEe
Q 036953 227 RAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 227 tsVafSPdG~~LlaS~s 243 (792)
+.++|++++..|+.+-.
T Consensus 169 nglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADA 185 (318)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred cEEEEeccCCEEEEEEC
Confidence 89999998887877653
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.76 E-value=0.69 Score=55.61 Aligned_cols=165 Identities=10% Similarity=0.043 Sum_probs=106.7
Q ss_pred EeCCCeEEEEeccCC---CcCCCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCC----cEEEEecCCCCCcEEEEEc
Q 036953 75 WVEAESLRHLSAKYC---PLVPPPRSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTG----NCLKVLSGHRRTPWVVRFH 146 (792)
Q Consensus 75 ~s~d~sIrvWd~~t~---~L~gH~~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tg----k~v~~L~gH~~~VtsVafS 146 (792)
......|+..+.... .+......+..++|++....|+.. ...+.|+.+++... .....+........+|++.
T Consensus 400 ~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 400 FTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp EECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 344455776666533 233345668899999855555544 45678999998753 2334444345567889998
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc--C-CeEEEEECCCCCcccCCeEEecC
Q 036953 147 PLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS--G-HKLYIWPYNNKEEASSPIIVLKT 222 (792)
Q Consensus 147 P~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS--d-d~V~IWDlrt~~~~~~~~~~~~h 222 (792)
+..++++++-...+.|.+.++........+. .......|+++|.+.+|+.+. . .+|...++...... ......
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~---~lv~~~ 556 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTEN 556 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE---EEECSS
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE---EEEeCC
Confidence 7455677777778899999998655443332 445688999999866666554 2 45999998655422 122233
Q ss_pred CCCeEEEEEccCCCeEEEEE
Q 036953 223 RRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 223 ~~sVtsVafSPdG~~LlaS~ 242 (792)
-...+.|++++.+..|+.+-
T Consensus 557 l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp CSCEEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEecCCCeEEEEe
Confidence 45788999998888777764
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.63 E-value=1.4 Score=48.03 Aligned_cols=117 Identities=9% Similarity=-0.029 Sum_probs=79.7
Q ss_pred CCCeEEEEEcCCCCEEE-EEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeC-CCeEEEEECCCCcE
Q 036953 95 PRSTIAAAFSPDGRTLA-STHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSL-DHEVRLWDANTSEC 172 (792)
Q Consensus 95 ~~~V~sLafSPDG~~La-SGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~-DgtVrLWDl~tg~~ 172 (792)
......+++.+.+..|+ +-...+.|.+.+++.......+...-....++++.|.++.++.+-.. .+.|...++.....
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 34678999998555554 44557889999988665555555445568999999944445554422 36788888876443
Q ss_pred EEEec-cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCC
Q 036953 173 IGSCD-FYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKE 211 (792)
Q Consensus 173 v~t~~-h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~ 211 (792)
..... .-...+.|++++++..|+.+. .+.|..+|+....
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 33332 335788999999888777765 4569999986544
No 281
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.51 E-value=2 Score=50.17 Aligned_cols=163 Identities=8% Similarity=-0.025 Sum_probs=108.0
Q ss_pred CCCeEEEEeccCCCc-----CCCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCC
Q 036953 77 EAESLRHLSAKYCPL-----VPPPRSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRS 150 (792)
Q Consensus 77 ~d~sIrvWd~~t~~L-----~gH~~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg 150 (792)
....|+..+...... ...-..+..++|+++...|+.+ ..++.|+.++++.......+..-.....++++.+.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 456677777654321 1223468899999966666555 4578899999876554444443334678899987456
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 151 EILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 151 ~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
+++++-...+.|.+.++........+ ..-.....++++|...+|+.+. ..+|...++..... ......-...
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~----~~l~~~~~~P 168 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER----TTLVPNVGRA 168 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSCSSE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce----EEEECCCCCc
Confidence 66677667789999999765433333 3445678999998655555554 34588888866542 2233345667
Q ss_pred EEEEEccCCCeEEEEEe
Q 036953 227 RAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 227 tsVafSPdG~~LlaS~s 243 (792)
+.+++++++..|+.+-.
T Consensus 169 ~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred ceEEEccccCEEEEEEC
Confidence 89999998887877654
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.36 E-value=0.68 Score=50.56 Aligned_cols=171 Identities=10% Similarity=0.131 Sum_probs=104.0
Q ss_pred EEEEeCCCeEEEEeccCCCcCCCC-CCeEEEEEcC----CCCE--E-EEEE-C--CCeEEEEECC--CCcEEEEecC---
Q 036953 72 LVSWVEAESLRHLSAKYCPLVPPP-RSTIAAAFSP----DGRT--L-ASTH-G--DHTVKIIDCQ--TGNCLKVLSG--- 135 (792)
Q Consensus 72 L~S~s~d~sIrvWd~~t~~L~gH~-~~V~sLafSP----DG~~--L-aSGS-~--DGtVrIWDl~--tgk~v~~L~g--- 135 (792)
++...+.+-|.++|..-..+.... +.++.+..-| .|+. + ++.. . +++|.+|++. +++ +..+..
T Consensus 43 ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~ 121 (355)
T 3amr_A 43 LITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDH 121 (355)
T ss_dssp EEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTS
T ss_pred EEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccccc
Confidence 444555667778887433222112 4566666655 2332 3 3333 3 5789999774 333 555521
Q ss_pred ---CC-CCcEEEEE--ccCCCC-EEEEEeCCCeEEEEECC-------CCcEEEEeccCCCeeEEEEcCCCcEEEEEcCC-
Q 036953 136 ---HR-RTPWVVRF--HPLRSE-ILASGSLDHEVRLWDAN-------TSECIGSCDFYRPIASIAFHAEGELLAVASGH- 200 (792)
Q Consensus 136 ---H~-~~VtsVaf--SP~dg~-lLaSgS~DgtVrLWDl~-------tg~~v~t~~h~s~V~sVafSpdG~~LasgSdd- 200 (792)
.. ..+.++|+ +|..+. +++....++.+..|++. +.+.+++|...+.+..+...+....|+.+-.+
T Consensus 122 pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 122 PIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp CEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTT
T ss_pred CcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccc
Confidence 12 56778888 663443 67778889999999883 34667788888899999999988888888854
Q ss_pred eEEEEECCCCCccc-CCeEEecC---CCCeEEEEE--ccCCC-eEEEEEe
Q 036953 201 KLYIWPYNNKEEAS-SPIIVLKT---RRSLRAVHF--HPHAA-PFVLTAE 243 (792)
Q Consensus 201 ~V~IWDlrt~~~~~-~~~~~~~h---~~sVtsVaf--SPdG~-~LlaS~s 243 (792)
.|..||.+-..... ........ ...+..+++ .++++ +|++++.
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 46666754222110 01112221 235778887 55666 6777774
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.29 E-value=2 Score=46.56 Aligned_cols=112 Identities=8% Similarity=0.016 Sum_probs=80.3
Q ss_pred eEEEEE---cCCCCEEEEEE-------------CCCeEEEEECC---CCcEEEEec--C-----------CCCCcEEEEE
Q 036953 98 TIAAAF---SPDGRTLASTH-------------GDHTVKIIDCQ---TGNCLKVLS--G-----------HRRTPWVVRF 145 (792)
Q Consensus 98 V~sLaf---SPDG~~LaSGS-------------~DGtVrIWDl~---tgk~v~~L~--g-----------H~~~VtsVaf 145 (792)
+..+.| .|+++.+++.. .+..|..||+. +++.+.... . -.....+++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 689999 68877777544 26779999999 787665543 1 1124788999
Q ss_pred ccCCCCEEEEEeCC-CeEEEEECCCCcEEEEe-cc-----CCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCC
Q 036953 146 HPLRSEILASGSLD-HEVRLWDANTSECIGSC-DF-----YRPIASIAFHAEGELLAVAS-GHKLYIWPYNNK 210 (792)
Q Consensus 146 SP~dg~lLaSgS~D-gtVrLWDl~tg~~v~t~-~h-----~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~ 210 (792)
.+ +++..++++.- +.|...|.........+ .. ....+.|+++|+|++|++.. .++|..+|++..
T Consensus 145 D~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 145 DR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 99 99999999988 88888877654332222 11 12367999999999888876 455999999843
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.20 E-value=0.046 Score=63.29 Aligned_cols=81 Identities=17% Similarity=0.267 Sum_probs=57.8
Q ss_pred CCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCee--EEEEcCCCc-
Q 036953 116 DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIA--SIAFHAEGE- 192 (792)
Q Consensus 116 DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~--sVafSpdG~- 192 (792)
+|.|.-||+.+++.+..+.... .+..-.... .+.+++.++.|+.++.||.++++.++.+.....+. -+.|..+|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 5789999999999988876332 222211122 35788889999999999999999999987555443 367777886
Q ss_pred EEEEEc
Q 036953 193 LLAVAS 198 (792)
Q Consensus 193 ~LasgS 198 (792)
++++.+
T Consensus 543 Yv~~~~ 548 (582)
T 1flg_A 543 YLGVTV 548 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 444443
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.09 E-value=3.1 Score=43.99 Aligned_cols=115 Identities=9% Similarity=-0.059 Sum_probs=75.0
Q ss_pred CeEEEEEcCCCCEEE-EEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCcEEE
Q 036953 97 STIAAAFSPDGRTLA-STHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGS-LDHEVRLWDANTSECIG 174 (792)
Q Consensus 97 ~V~sLafSPDG~~La-SGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~v~ 174 (792)
....+++.+.+..|+ +-...+.|.+++++.......+........++++.|.++.++.+-. ..+.|...++.......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 466789987555554 4445688999998755433344344556789999983444444432 35788888886543322
Q ss_pred Ee-ccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCC
Q 036953 175 SC-DFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKE 211 (792)
Q Consensus 175 t~-~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~ 211 (792)
.. ..-...+.+++++++..|+.+. .+.|..+|+....
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 22 2234578999999877777665 4569999987543
No 286
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.98 E-value=0.048 Score=62.87 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=56.6
Q ss_pred CCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCe--eEEEEcCCCcE
Q 036953 116 DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPI--ASIAFHAEGEL 193 (792)
Q Consensus 116 DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V--~sVafSpdG~~ 193 (792)
++.|..||+.+++.+..+... ..+.+..+.. .+.+++.++.|+.|+.||.++++.++.+.....+ ..+.+..+|+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 478999999999998887632 2333322232 4567777999999999999999999998644332 23445577875
Q ss_pred EEEEc
Q 036953 194 LAVAS 198 (792)
Q Consensus 194 LasgS 198 (792)
++...
T Consensus 521 yv~~~ 525 (571)
T 2ad6_A 521 YIGSM 525 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.96 E-value=0.32 Score=53.99 Aligned_cols=145 Identities=11% Similarity=0.055 Sum_probs=86.4
Q ss_pred CCeEEEEEcCC--CCEEEEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCC---Ce-EEEEECCC
Q 036953 96 RSTIAAAFSPD--GRTLASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLD---HE-VRLWDANT 169 (792)
Q Consensus 96 ~~V~sLafSPD--G~~LaSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~D---gt-VrLWDl~t 169 (792)
.....++|+|+ ...|+.+...+.|+.+|..+++.... ........+++|++ +++++++.... .. +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCC
Confidence 34678999984 45566665548899999987765444 34455689999999 77766554321 12 33333222
Q ss_pred CcE-EEEeccCCCeeEEEEcC-CCcEEEEEc-CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 170 SEC-IGSCDFYRPIASIAFHA-EGELLAVAS-GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 170 g~~-v~t~~h~s~V~sVafSp-dG~~LasgS-dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
+.. ...+........+++++ +|.++++-. ++.|+.+|..++.... ..........-..++|+|++++|+++..
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 110 11222234456788999 566554543 4569999987665311 1111122233457999999997776654
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.89 E-value=1.6 Score=52.50 Aligned_cols=117 Identities=10% Similarity=-0.034 Sum_probs=80.0
Q ss_pred CCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCC-CeEEEEECCCCcE
Q 036953 95 PRSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLD-HEVRLWDANTSEC 172 (792)
Q Consensus 95 ~~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~D-gtVrLWDl~tg~~ 172 (792)
......|++.+.++.|+.+ ...+.|.+.+++.......+...-....+|++.|..+.++++-..+ +.|...++.....
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~ 549 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 549 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence 3456789999877666555 4578999999886554444444455689999999445555554333 6788889876544
Q ss_pred EEEec-cCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCC
Q 036953 173 IGSCD-FYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKE 211 (792)
Q Consensus 173 v~t~~-h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~ 211 (792)
...+. .-...+.|++++.+..|+.+. .++|..+|+....
T Consensus 550 ~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 550 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 43333 335788999998877777765 4569999986554
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.88 E-value=0.43 Score=54.40 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=87.4
Q ss_pred CeEEEEEcC-CCCEEEEEEC-CCeEEEEECCCCcEEEEecCC---CCCcEEEEE-------ccCCCCEEEEEeCCC----
Q 036953 97 STIAAAFSP-DGRTLASTHG-DHTVKIIDCQTGNCLKVLSGH---RRTPWVVRF-------HPLRSEILASGSLDH---- 160 (792)
Q Consensus 97 ~V~sLafSP-DG~~LaSGS~-DGtVrIWDl~tgk~v~~L~gH---~~~VtsVaf-------SP~dg~lLaSgS~Dg---- 160 (792)
....|+|+| +...|+.+.. .+.|++.|+..+.....+..- ......++| ++ +++.|+.....+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcc
Confidence 467999998 4555555544 467999998877655444321 234789999 98 777555554443
Q ss_pred ---eEEEEECCC-CcEE-----EEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECC-------CCCcc---------
Q 036953 161 ---EVRLWDANT-SECI-----GSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYN-------NKEEA--------- 213 (792)
Q Consensus 161 ---tVrLWDl~t-g~~v-----~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlr-------t~~~~--------- 213 (792)
.|.+.+... ++.. ..+........++.+|++..|+++. ++.|+.+|+. ++...
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266666443 2221 1222223445778899655555443 5569999997 44430
Q ss_pred -cCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 214 -SSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 214 -~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
............-+.++|+|+|+.|+++-.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeC
Confidence 001112223345689999999997666543
No 290
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.40 E-value=1.1 Score=47.90 Aligned_cols=98 Identities=19% Similarity=0.249 Sum_probs=61.8
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE--EEEec---CCCCCcEEEEEccCC----CCEEEEEeCC-----CeE
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNC--LKVLS---GHRRTPWVVRFHPLR----SEILASGSLD-----HEV 162 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~--v~~L~---gH~~~VtsVafSP~d----g~lLaSgS~D-----gtV 162 (792)
....++|.|||+ |+++..++.|++++ .++. +..+. .-.....+++|+| + +.++++-..+ +.|
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCccEE
Confidence 477999999998 45556779999998 4442 22221 1245678999999 5 4555554433 678
Q ss_pred EEEECCCCc-----EE-EEecc----CCCeeEEEEcCCCcEEEEEc
Q 036953 163 RLWDANTSE-----CI-GSCDF----YRPIASIAFHAEGELLAVAS 198 (792)
Q Consensus 163 rLWDl~tg~-----~v-~t~~h----~s~V~sVafSpdG~~LasgS 198 (792)
..|++..++ .+ ..+.. ......++|.|||.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888876532 11 11221 12346899999997666643
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.31 E-value=4.3 Score=47.13 Aligned_cols=164 Identities=10% Similarity=0.011 Sum_probs=101.8
Q ss_pred CCCeEEEEeccCC-----CcCCCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCcE-EEEecCCCCCcEEEEEccCC
Q 036953 77 EAESLRHLSAKYC-----PLVPPPRSTIAAAFSPDGRTLASTHG-DHTVKIIDCQTGNC-LKVLSGHRRTPWVVRFHPLR 149 (792)
Q Consensus 77 ~d~sIrvWd~~t~-----~L~gH~~~V~sLafSPDG~~LaSGS~-DGtVrIWDl~tgk~-v~~L~gH~~~VtsVafSP~d 149 (792)
..+.|+..+.... .+...-+.+..++|++.+..|+.+.. .+.|..++++.... ...+..--....++++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 3455666665432 12233456889999997776666554 67898899875532 23343333578899999845
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEEecCCCC
Q 036953 150 SEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIVLKTRRS 225 (792)
Q Consensus 150 g~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~~~h~~s 225 (792)
++++++-...+.|.+.|+........+ ..-.....|+++|.+.+|+.+. ..+|...++...... ......-..
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~~~~ 172 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIYW 172 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSS
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE---EEEeCCCCC
Confidence 566666667889999999765443333 3445577899999766555554 245777777654321 122223456
Q ss_pred eEEEEEccCCCeEEEEEe
Q 036953 226 LRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 226 VtsVafSPdG~~LlaS~s 243 (792)
-+.+++++++..|+.+-.
T Consensus 173 P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp EEEEEEETTTTEEEEEET
T ss_pred CcEEEEEccCCEEEEEeC
Confidence 789999998887777643
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.21 E-value=1.9 Score=45.34 Aligned_cols=142 Identities=11% Similarity=0.064 Sum_probs=84.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC--CCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC
Q 036953 93 PPPRSTIAAAFSPDGRTLASTHGDHTVKIIDC--QTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTS 170 (792)
Q Consensus 93 gH~~~V~sLafSPDG~~LaSGS~DGtVrIWDl--~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg 170 (792)
++...+..+++.+++..++.+...+..+-+|- .+-+.+. ......+..+.+.+ ++.++ .++.++.+++++...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~-~g~~~-~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTP-DGRLW-MIVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECT-TSCEE-EEETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECC-CCCEE-EEeCCceEEEecCCCC
Confidence 44567899999999887776644433333442 2222221 23556788999988 66655 4566888887753333
Q ss_pred cEEEEec-----cCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEEe---cCCCCeEEEEEccCCCeEEEEE
Q 036953 171 ECIGSCD-----FYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIVL---KTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 171 ~~v~t~~-----h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~~---~h~~sVtsVafSPdG~~LlaS~ 242 (792)
+....+. ....+.++.+.+++.+++++.++.| .+..+.++... ... .....++++.|.+++. +++.+
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~---~~~~~~~~~~~~~~v~~~~~~~-~~~~G 310 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQ---QDVDVKKVPSNFYKILFFSPDQ-GFILG 310 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCE---ECGGGTTSSSCCCEEEEEETTE-EEEEC
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccE---EcCccCCCCCCeEEEEEECCCc-eEEEc
Confidence 3322222 1235889999998888888877666 34444443221 111 1235678888875554 44444
Q ss_pred e
Q 036953 243 E 243 (792)
Q Consensus 243 s 243 (792)
.
T Consensus 311 ~ 311 (327)
T 2xbg_A 311 Q 311 (327)
T ss_dssp S
T ss_pred C
Confidence 3
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.12 E-value=1.1 Score=48.09 Aligned_cols=143 Identities=17% Similarity=0.193 Sum_probs=81.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc-EEEEec---CCCCCcEEEEEccC---CCCEEEEEeC---C----Ce
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN-CLKVLS---GHRRTPWVVRFHPL---RSEILASGSL---D----HE 161 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk-~v~~L~---gH~~~VtsVafSP~---dg~lLaSgS~---D----gt 161 (792)
.....|+|.|||+ |+++..++.|+++| .+++ .+..+. .-.....+|+|+|+ ++.++++-+. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3478999999997 55556779999997 3454 222221 12356889999993 3555555442 3 56
Q ss_pred EEEEECCCC--c-----EE-EEec--cCCCeeEEEEcCCCcEEEEEcC--------------CeEEEEECCCCCcc----
Q 036953 162 VRLWDANTS--E-----CI-GSCD--FYRPIASIAFHAEGELLAVASG--------------HKLYIWPYNNKEEA---- 213 (792)
Q Consensus 162 VrLWDl~tg--~-----~v-~t~~--h~s~V~sVafSpdG~~LasgSd--------------d~V~IWDlrt~~~~---- 213 (792)
|..|++... . .+ ..+. .......++|.|||.++++.++ ++|.-+|....-..
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777877654 1 11 1122 1223567999999987776442 24555554322000
Q ss_pred -cCCeEEecCCCCeEEEEEcc-CCCeEEEEE
Q 036953 214 -SSPIIVLKTRRSLRAVHFHP-HAAPFVLTA 242 (792)
Q Consensus 214 -~~~~~~~~h~~sVtsVafSP-dG~~LlaS~ 242 (792)
.......++ .....++|+| +++ |.++-
T Consensus 187 ~~~~i~a~G~-rnp~Gla~d~~~g~-l~v~d 215 (354)
T 3a9g_A 187 PNSPIWSYGH-RNPQGIDWHRASGV-MVATE 215 (354)
T ss_dssp TTCCEEEECC-SCCCEEEECTTTCC-EEEEE
T ss_pred CCCcEEEEcc-CCcceEEEeCCCCC-EEEEe
Confidence 001222223 3456899999 565 54443
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.05 E-value=7.4 Score=41.45 Aligned_cols=142 Identities=9% Similarity=0.049 Sum_probs=75.5
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEE-eccCCCcCCCCCCeEEEEEcCC---CCEEEEEEC-C-
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHL-SAKYCPLVPPPRSTIAAAFSPD---GRTLASTHG-D- 116 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvW-d~~t~~L~gH~~~V~sLafSPD---G~~LaSGS~-D- 116 (792)
....++|.++++++.+-. ..+|+... ++....+ +.. ....-......++|+|+ +..|+.+.. +
T Consensus 32 ~P~~ia~~pdG~l~V~e~--------~g~I~~i~-~g~~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAER--------PGRIRLFR-EGRLSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp CEEEEEECTTSCEEEEET--------TTEEEEEE-TTEEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred CceEEEEcCCCeEEEEeC--------CCeEEEEE-CCCccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCC
Confidence 456778888877543321 12333333 3333322 111 11222456899999998 556655443 2
Q ss_pred ----CeEEEEECCCCc-----EE-EEec---CCCCCcEEEEEccCCCCEEEEEeCC-------------CeEEEEECCC-
Q 036953 117 ----HTVKIIDCQTGN-----CL-KVLS---GHRRTPWVVRFHPLRSEILASGSLD-------------HEVRLWDANT- 169 (792)
Q Consensus 117 ----GtVrIWDl~tgk-----~v-~~L~---gH~~~VtsVafSP~dg~lLaSgS~D-------------gtVrLWDl~t- 169 (792)
+.|..|+...++ .+ ..+. +.......++|.| ++.++++.+.. +.|.-+|...
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 578888876432 11 2233 1112346899999 88777775422 4566666543
Q ss_pred -------------CcEEEEeccCCCeeEEEEcC-CCcEEEEE
Q 036953 170 -------------SECIGSCDFYRPIASIAFHA-EGELLAVA 197 (792)
Q Consensus 170 -------------g~~v~t~~h~s~V~sVafSp-dG~~Lasg 197 (792)
...+....+ .....++|+| +|+++++-
T Consensus 180 ~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEE
T ss_pred CCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEE
Confidence 111222222 2356789999 56655554
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.71 E-value=3.5 Score=43.35 Aligned_cols=144 Identities=14% Similarity=0.131 Sum_probs=82.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE-EEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEEC--CCC
Q 036953 94 PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL-KVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDA--NTS 170 (792)
Q Consensus 94 H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v-~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl--~tg 170 (792)
+...+..+.+.+++..++.+ .++.|.. ..+.++.- ....++...+..+.+.+ ++.+++.+...+.++-+|- .+-
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCce
Confidence 34567888887777666554 4564432 22334322 22235566789999998 7777766644444444553 111
Q ss_pred cEEEEeccCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcccCCeEE-ecCCCCeEEEEEccCCCeEEEEE
Q 036953 171 ECIGSCDFYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEASSPIIV-LKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 171 ~~v~t~~h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~~~~~~-~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
+.+ .......+..+.+.+++++++++.++.+++.+...++........ ......+..+.|.+++. +++.+
T Consensus 197 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g 267 (327)
T 2xbg_A 197 EPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAG 267 (327)
T ss_dssp EEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEE
T ss_pred eEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-EEEEe
Confidence 222 123456788999999998888777777777643222211100000 11234588999998777 44444
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.71 E-value=0.56 Score=53.46 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=86.9
Q ss_pred cEEEEEeC-CCeEEEEeccCCCcC---C----CCCCeEEEEE-------cCCCCEEEEEECCC-------eEEEEECCC-
Q 036953 70 RGLVSWVE-AESLRHLSAKYCPLV---P----PPRSTIAAAF-------SPDGRTLASTHGDH-------TVKIIDCQT- 126 (792)
Q Consensus 70 ~~L~S~s~-d~sIrvWd~~t~~L~---g----H~~~V~sLaf-------SPDG~~LaSGS~DG-------tVrIWDl~t- 126 (792)
..|+.+.. .+.|+++|.+.+.+. . .......++| ++++++|+++...+ .|.+++...
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 44555543 466888887765321 1 2235899999 99999777776654 266665433
Q ss_pred CcEE-----EEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC-------CCcE--------------EEEeccCC
Q 036953 127 GNCL-----KVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDAN-------TSEC--------------IGSCDFYR 180 (792)
Q Consensus 127 gk~v-----~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~-------tg~~--------------v~t~~h~s 180 (792)
++.. ..+.. .....+++++|.++.++++-..++.|..+|+. ++.. +.......
T Consensus 232 G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 232 GTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp SCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred Cceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 1211 22221 12345688999666677777788899999987 5543 22223345
Q ss_pred CeeEEEEcCCCcEEEEEc--CCeEEEEECC
Q 036953 181 PIASIAFHAEGELLAVAS--GHKLYIWPYN 208 (792)
Q Consensus 181 ~V~sVafSpdG~~LasgS--dd~V~IWDlr 208 (792)
....++|+|+|++|+.+. .+.|+.+|..
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 567999999999666654 5568886654
No 297
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.66 E-value=2.6 Score=47.04 Aligned_cols=103 Identities=13% Similarity=0.149 Sum_probs=61.9
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE--EEecC------CCCCcEEEEEccC---CCCEEEEEeC-------
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL--KVLSG------HRRTPWVVRFHPL---RSEILASGSL------- 158 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v--~~L~g------H~~~VtsVafSP~---dg~lLaSgS~------- 158 (792)
....|+|.|+|+.+++-...+.|++++..+++.. ..+.. ..+...+|+|+|+ ++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4679999999986666443357888886555432 22321 2456779999993 4444444432
Q ss_pred -----CCeEEEEECCCC-------cEEE-Eec--cCCCeeEEEEcCCCcEEEEEcC
Q 036953 159 -----DHEVRLWDANTS-------ECIG-SCD--FYRPIASIAFHAEGELLAVASG 199 (792)
Q Consensus 159 -----DgtVrLWDl~tg-------~~v~-t~~--h~s~V~sVafSpdG~~LasgSd 199 (792)
...|.-|++... +.+. .+. .......|+|.|||+++++.++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555655332 1111 122 2345789999999987776553
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.61 E-value=0.12 Score=61.17 Aligned_cols=163 Identities=11% Similarity=0.054 Sum_probs=97.8
Q ss_pred CCeEEEEeccCCC---cCCCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCC----CcEEEEecCCCCCcEEEEEccCC
Q 036953 78 AESLRHLSAKYCP---LVPPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQT----GNCLKVLSGHRRTPWVVRFHPLR 149 (792)
Q Consensus 78 d~sIrvWd~~t~~---L~gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~t----gk~v~~L~gH~~~VtsVafSP~d 149 (792)
...|+..+..... +......+..++|++.+..|+... ..+.|+.+++.. ......+........+|++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 3456666665432 223334567899998776666654 457899999875 22222222222345678887535
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEc-C--CeEEEEECCCCCcccCCeEEecCCCC
Q 036953 150 SEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVAS-G--HKLYIWPYNNKEEASSPIIVLKTRRS 225 (792)
Q Consensus 150 g~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgS-d--d~V~IWDlrt~~~~~~~~~~~~h~~s 225 (792)
++++++-...+.|.++|+........+. .......++++|.+.+|+.+. . ++|+.+++...... ......-..
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~---~l~~~~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQW 541 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC---EESCSSCSS
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee---EEEeCCCCC
Confidence 6666666667889999987655444433 234567889999766555544 2 45888877543321 111122344
Q ss_pred eEEEEEccCCCeEEEEEe
Q 036953 226 LRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 226 VtsVafSPdG~~LlaS~s 243 (792)
-+.|+|+|++..|+.+-.
T Consensus 542 PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp CCCEEECTTTCCEEEEET
T ss_pred ccEEEEeccCCEEEEEec
Confidence 568999998887776653
No 299
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.52 E-value=1.4 Score=47.24 Aligned_cols=143 Identities=17% Similarity=0.057 Sum_probs=79.5
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec-------CCCCCcEEEEEccC---CCCEEEEEeC-------C
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS-------GHRRTPWVVRFHPL---RSEILASGSL-------D 159 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~-------gH~~~VtsVafSP~---dg~lLaSgS~-------D 159 (792)
....|+|.|+|++|+++...|.|++++.. ++....+. ...+....++|+|+ ++.+.++-+. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 36799999999845556678999999853 33211111 12345689999993 3445554333 2
Q ss_pred CeEEEEECCCC--c--EEE-Ee---c----cCCCeeEEEEcCCCcEEEEEcC--------------CeEEEEECCCCCcc
Q 036953 160 HEVRLWDANTS--E--CIG-SC---D----FYRPIASIAFHAEGELLAVASG--------------HKLYIWPYNNKEEA 213 (792)
Q Consensus 160 gtVrLWDl~tg--~--~v~-t~---~----h~s~V~sVafSpdG~~LasgSd--------------d~V~IWDlrt~~~~ 213 (792)
..|..|++... + ... .+ . .......+.|.|||.++++.++ ++|.-+|....-..
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666532 1 111 11 1 1123467999999976666543 35666666432100
Q ss_pred ---------cCCeEEecCCCCeEEEEEcc-CCCeEEEE
Q 036953 214 ---------SSPIIVLKTRRSLRAVHFHP-HAAPFVLT 241 (792)
Q Consensus 214 ---------~~~~~~~~h~~sVtsVafSP-dG~~LlaS 241 (792)
.........-.....++|+| +|+ |.++
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~-l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNA-LWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTE-EEEE
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCC-EEEE
Confidence 00112222334567899999 555 4443
No 300
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.12 E-value=3 Score=45.19 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=81.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE--EEec----CCCCCcEEEEEccC---CCCEEEEEe--CCCeEEE
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL--KVLS----GHRRTPWVVRFHPL---RSEILASGS--LDHEVRL 164 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v--~~L~----gH~~~VtsVafSP~---dg~lLaSgS--~DgtVrL 164 (792)
.....|+|.|||+.+++--..|.|++++..+++.. ..+. ...+...+|+|+|+ ++.+.++-+ .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 34789999999987666555899999987655532 2221 23456789999982 344444322 4455666
Q ss_pred EECCCC----------cEEE-Eec--cCCCeeEEEEcCCCcEEEEEcC--------------CeEEEEECCCCCcc----
Q 036953 165 WDANTS----------ECIG-SCD--FYRPIASIAFHAEGELLAVASG--------------HKLYIWPYNNKEEA---- 213 (792)
Q Consensus 165 WDl~tg----------~~v~-t~~--h~s~V~sVafSpdG~~LasgSd--------------d~V~IWDlrt~~~~---- 213 (792)
|.+..+ +.+. .+. .......|.|.|||.++++.++ ++|.-.+....-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 665541 1111 121 2234567999999987776542 33444444322000
Q ss_pred -cCCeEEecCCCCeEEEEEccCCCeE
Q 036953 214 -SSPIIVLKTRRSLRAVHFHPHAAPF 238 (792)
Q Consensus 214 -~~~~~~~~h~~sVtsVafSPdG~~L 238 (792)
.......++ .....++|+|+|..+
T Consensus 192 ~~~~i~a~G~-RNp~Gla~dp~G~L~ 216 (347)
T 3das_A 192 PGSPVYSYGH-RNVQGLAWDDKQRLF 216 (347)
T ss_dssp TTCCEEEBCC-SBCCEEEECTTCCEE
T ss_pred CCCeEEeeCC-CCcceEEECCCCCEE
Confidence 001222233 445689999988733
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.90 E-value=12 Score=43.45 Aligned_cols=141 Identities=7% Similarity=-0.040 Sum_probs=90.7
Q ss_pred CCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEE-eCCCeEEEEECCCCcEE
Q 036953 96 RSTIAAAFSPDGRTLAST-HGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASG-SLDHEVRLWDANTSECI 173 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSG-S~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSg-S~DgtVrLWDl~tg~~v 173 (792)
.....+++++.+..|+.+ ...+.|.+.+++.......+...-....++++.|.++.++.+- +....|...++......
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 346789998866656555 4567899999876543333434445678999998455555543 23567888888765544
Q ss_pred EEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 174 GSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 174 ~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
.....-...+.++++++++.|+.+. .+.|..+|+..... . ...........+++.. ..++.+.
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~---v~~~~l~~P~glav~~--~~ly~tD 224 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E---VIADDLPHPFGLTQYQ--DYIYWTD 224 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E---EEEECCSCEEEEEEET--TEEEEEE
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E---EeeccCCCceEEEEEC--CEEEEec
Confidence 4444556788999999888777775 45699999976543 1 2222333445677653 4455554
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.80 E-value=16 Score=42.41 Aligned_cols=166 Identities=8% Similarity=-0.002 Sum_probs=105.4
Q ss_pred EeCCCeEEEEeccCCCcC------CCCCCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCcEEEEecCCCCCcEEEEEcc
Q 036953 75 WVEAESLRHLSAKYCPLV------PPPRSTIAAAFSPDGRTLASTH-GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHP 147 (792)
Q Consensus 75 ~s~d~sIrvWd~~t~~L~------gH~~~V~sLafSPDG~~LaSGS-~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP 147 (792)
......|+..+....... ..-..+..++|++.+..|+.+. ..+.|+.++++.......+...-..+.++++..
T Consensus 322 ~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~ 401 (619)
T 3s94_A 322 LARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDW 401 (619)
T ss_dssp EEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET
T ss_pred EEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEec
Confidence 344556777776543211 1234578999998655565554 578899999876554444443345678899986
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEcCCCcEEEEEc---CCeEEEEECCCCCcccCCeEEecCC
Q 036953 148 LRSEILASGSLDHEVRLWDANTSECIGSC-DFYRPIASIAFHAEGELLAVAS---GHKLYIWPYNNKEEASSPIIVLKTR 223 (792)
Q Consensus 148 ~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~h~s~V~sVafSpdG~~LasgS---dd~V~IWDlrt~~~~~~~~~~~~h~ 223 (792)
.+++++.+-+..+.|.+.++........+ ..-....+++++|...+|+.+. ..+|...++...... ......-
T Consensus 402 ~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~l 478 (619)
T 3s94_A 402 VARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV---VLVNTSL 478 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSC
T ss_pred ccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE---EEEeCCC
Confidence 45667777677889999998765433223 2345678999999744444443 245777777654321 1222234
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 036953 224 RSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 224 ~sVtsVafSPdG~~LlaS~s 243 (792)
..-+.+++++++..|..+-.
T Consensus 479 ~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 479 GWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp SCEEEEEEETTTTEEEEEET
T ss_pred CCCeeeEEcccCCEEEEEEC
Confidence 56789999998887776643
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.75 E-value=6 Score=42.98 Aligned_cols=141 Identities=13% Similarity=0.117 Sum_probs=84.8
Q ss_pred CeEEEEEcC--CCC-EEEEE-EC--CCeEEEEECCCC-c---EEEEecCC-CCCcEEEEEccCCCCEEEEEeC-------
Q 036953 97 STIAAAFSP--DGR-TLAST-HG--DHTVKIIDCQTG-N---CLKVLSGH-RRTPWVVRFHPLRSEILASGSL------- 158 (792)
Q Consensus 97 ~V~sLafSP--DG~-~LaSG-S~--DGtVrIWDl~tg-k---~v~~L~gH-~~~VtsVafSP~dg~lLaSgS~------- 158 (792)
....+.+.+ ++. +|+.+ .. +.+|.||++..+ + .+..+.+. -...+++.+.+ ++.++++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCccc
Confidence 466666655 454 34444 33 567888877643 2 23334432 24578899999 8887777541
Q ss_pred ----------CCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCCCcccCCeEEecCCCCe
Q 036953 159 ----------DHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNKEEASSPIIVLKTRRSL 226 (792)
Q Consensus 159 ----------DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~~~~~~~~~~~~h~~sV 226 (792)
.+.|..+|. ++.......-...+.++|+||+++|+++. .++|+.||+........... .......
T Consensus 192 ~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~-~~~~g~P 268 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV-LSFDTLV 268 (355)
T ss_dssp HHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSEE
T ss_pred ccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEE-EeCCCCC
Confidence 234555554 33333334445678999999999888776 45699999874332221111 2234556
Q ss_pred EEEEEcc-CCCeEEEE
Q 036953 227 RAVHFHP-HAAPFVLT 241 (792)
Q Consensus 227 tsVafSP-dG~~LlaS 241 (792)
-.+++.+ +|+..+++
T Consensus 269 DGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 269 DNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred ceEEEeCCCCcEEEEe
Confidence 7888998 58855434
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.54 E-value=6.4 Score=44.14 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=69.8
Q ss_pred CCCCEEEEEECCCeEEEEECCCCcEEEEecCC----CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc---------
Q 036953 105 PDGRTLASTHGDHTVKIIDCQTGNCLKVLSGH----RRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSE--------- 171 (792)
Q Consensus 105 PDG~~LaSGS~DGtVrIWDl~tgk~v~~L~gH----~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~--------- 171 (792)
.+|..++.+-. +.||.-++......+.+.-- ...|..+..+| ++++|+..+ +.+|.+-.+..+.
T Consensus 30 ~n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 36666666543 57887777644444444422 23588899999 999999875 6689998887331
Q ss_pred ---EEEEec-------cCCCeeEEEEcCCC---cEEE-EEcCCeEEEEECCCCC
Q 036953 172 ---CIGSCD-------FYRPIASIAFHAEG---ELLA-VASGHKLYIWPYNNKE 211 (792)
Q Consensus 172 ---~v~t~~-------h~s~V~sVafSpdG---~~La-sgSdd~V~IWDlrt~~ 211 (792)
..+.+. ...+|..+.|||-+ ..|+ ..+++.|++||+.+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~ 160 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ 160 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC
Confidence 122332 24679999999965 3444 4556779999998744
No 305
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.40 E-value=2.9 Score=48.43 Aligned_cols=94 Identities=4% Similarity=0.024 Sum_probs=61.5
Q ss_pred eEEEEeccCCCcC-------CCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCcEEEEecCC-CCCcEEEEEccCCC
Q 036953 80 SLRHLSAKYCPLV-------PPPRSTIAAAFSPDGRTLASTHG-DHTVKIIDCQTGNCLKVLSGH-RRTPWVVRFHPLRS 150 (792)
Q Consensus 80 sIrvWd~~t~~L~-------gH~~~V~sLafSPDG~~LaSGS~-DGtVrIWDl~tgk~v~~L~gH-~~~VtsVafSP~dg 150 (792)
.+.+||..+++.. .+.....++++..+++.++.|+. +..+.+||..+++-...-.-+ ...-.++++.+ ++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS-DG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT-TS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEec-CC
Confidence 5778888766422 12333445778889999999984 568999998876533221111 12223455666 78
Q ss_pred CEEEEEe-CC-----CeEEEEECCCCcEEE
Q 036953 151 EILASGS-LD-----HEVRLWDANTSECIG 174 (792)
Q Consensus 151 ~lLaSgS-~D-----gtVrLWDl~tg~~v~ 174 (792)
++++.|+ .+ ..+.+||..+.+...
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred eEEEEeCcccCCcccccceEeCCCCCccee
Confidence 8999988 44 579999998876544
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.26 E-value=4.3 Score=45.57 Aligned_cols=128 Identities=18% Similarity=0.164 Sum_probs=82.0
Q ss_pred cCCcEEEEEeCCCeEEEEeccCC----CcCCC----CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc----------
Q 036953 67 DAKRGLVSWVEAESLRHLSAKYC----PLVPP----PRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGN---------- 128 (792)
Q Consensus 67 d~~~~L~S~s~d~sIrvWd~~t~----~L~gH----~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk---------- 128 (792)
..+..++.+. ++.||..+.... .+.-. -+.|..+..||+|++||..+ ++.|.|-.+..+.
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 3344444433 466776665422 11111 23578899999999999875 5589998886321
Q ss_pred --EEEEecC------CCCCcEEEEEcc--CCCCEEEEEeCCCeEEEEECCCC--cEEEEec----------cCCCeeEEE
Q 036953 129 --CLKVLSG------HRRTPWVVRFHP--LRSEILASGSLDHEVRLWDANTS--ECIGSCD----------FYRPIASIA 186 (792)
Q Consensus 129 --~v~~L~g------H~~~VtsVafSP--~dg~lLaSgS~DgtVrLWDl~tg--~~v~t~~----------h~s~V~sVa 186 (792)
..+.+.- ....|..+.||| .++..|++-..|++||+||+... ++. .+. ....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 1223321 256799999999 23458899999999999999862 333 221 124678888
Q ss_pred EcCCCcEEEEE
Q 036953 187 FHAEGELLAVA 197 (792)
Q Consensus 187 fSpdG~~Lasg 197 (792)
|..++-.|...
T Consensus 187 Fg~~~lTLYvl 197 (452)
T 3pbp_A 187 FSKDGLTLYCL 197 (452)
T ss_dssp ECTTSSCEEEE
T ss_pred EcCCCcEEEEE
Confidence 88877655553
No 307
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.09 E-value=0.61 Score=54.11 Aligned_cols=111 Identities=21% Similarity=0.226 Sum_probs=75.3
Q ss_pred EEEEcC-CCCEEEEEECCC-----------eEEEEECCCCcE--EEEec-CCCCCcEEEEEccCCCCEEEEEeC-CCeEE
Q 036953 100 AAAFSP-DGRTLASTHGDH-----------TVKIIDCQTGNC--LKVLS-GHRRTPWVVRFHPLRSEILASGSL-DHEVR 163 (792)
Q Consensus 100 sLafSP-DG~~LaSGS~DG-----------tVrIWDl~tgk~--v~~L~-gH~~~VtsVafSP~dg~lLaSgS~-DgtVr 163 (792)
.+++.+ +++.++.|+.+. .+.+||..+++- +..+. .+.....++++.. ++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceE
Confidence 566777 888888887643 588999987752 23332 2334445677777 8899999984 56899
Q ss_pred EEECCCCcEEEEec--cCCCeeEEEEcCCCcEEEEEc-C------CeEEEEECCCCC
Q 036953 164 LWDANTSECIGSCD--FYRPIASIAFHAEGELLAVAS-G------HKLYIWPYNNKE 211 (792)
Q Consensus 164 LWDl~tg~~v~t~~--h~s~V~sVafSpdG~~LasgS-d------d~V~IWDlrt~~ 211 (792)
+||..+.+....-. ....-.+++..++|++++.|+ . ..+.+||..+.+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 99998876543321 222234556677999999887 2 238999987754
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.63 E-value=8.1 Score=41.92 Aligned_cols=142 Identities=8% Similarity=0.086 Sum_probs=84.1
Q ss_pred CCeEEEEEcCCCCEEEEE------------ECCCeEEEEECCC--CcE-EEEecC-----CCCCcEEEEEccC-CCC-EE
Q 036953 96 RSTIAAAFSPDGRTLAST------------HGDHTVKIIDCQT--GNC-LKVLSG-----HRRTPWVVRFHPL-RSE-IL 153 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSG------------S~DGtVrIWDl~t--gk~-v~~L~g-----H~~~VtsVafSP~-dg~-lL 153 (792)
.....+...|+|..++++ ..+|.|.++|.++ .+. ...+.+ ......++.+.++ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345677778877655554 2689999999873 221 112222 2346677887662 232 44
Q ss_pred EEEe-C--CCeEEEEECCCC-c---EEEEecc--CCCeeEEEEcCCCcEEEEEcC------------------CeEEEEE
Q 036953 154 ASGS-L--DHEVRLWDANTS-E---CIGSCDF--YRPIASIAFHAEGELLAVASG------------------HKLYIWP 206 (792)
Q Consensus 154 aSgS-~--DgtVrLWDl~tg-~---~v~t~~h--~s~V~sVafSpdG~~LasgSd------------------d~V~IWD 206 (792)
+.+. . +.+|.+|++... . .+..+.+ -...+++.+.++|.+.++... +.|+-+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 4443 2 467788776543 2 2223332 345789999999998777541 2255555
Q ss_pred CCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 036953 207 YNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 207 lrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~s 243 (792)
. .+ .......-..-+.++|+||++.++++..
T Consensus 210 ~--~~----~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 210 P--ND----VRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp T--TC----CEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred C--Ce----EEEeecCCcccCcceECCCCCEEEEEeC
Confidence 4 22 1223333455789999999998887764
No 309
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.94 E-value=0.54 Score=55.55 Aligned_cols=114 Identities=10% Similarity=-0.024 Sum_probs=69.6
Q ss_pred CeEEEEEcCCCCEE-EEEECCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCC-CeEEEEECCCCcEEE
Q 036953 97 STIAAAFSPDGRTL-ASTHGDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLD-HEVRLWDANTSECIG 174 (792)
Q Consensus 97 ~V~sLafSPDG~~L-aSGS~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~D-gtVrLWDl~tg~~v~ 174 (792)
....+++.+.+..| ++-...+.|.++++........+........++++.|.++.++++-... +.|..+++.......
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 35578888644444 4444567899999876554444443335567899998445455443233 678877775432222
Q ss_pred Ee-ccCCCeeEEEEcCCCcEEEEEc--CCeEEEEECCCC
Q 036953 175 SC-DFYRPIASIAFHAEGELLAVAS--GHKLYIWPYNNK 210 (792)
Q Consensus 175 t~-~h~s~V~sVafSpdG~~LasgS--dd~V~IWDlrt~ 210 (792)
.+ ..-...+.|+|++++..|+.+. .+.|..+|+...
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 22 2234567899999876666554 455999998643
No 310
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.09 E-value=2.4 Score=49.16 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=69.2
Q ss_pred CCEEEEEEC-CCeEEEEEC-CCCcEEEEecCCCCC-----------cEEEEEccCCCCE----EEEEeCCCeEEEEECCC
Q 036953 107 GRTLASTHG-DHTVKIIDC-QTGNCLKVLSGHRRT-----------PWVVRFHPLRSEI----LASGSLDHEVRLWDANT 169 (792)
Q Consensus 107 G~~LaSGS~-DGtVrIWDl-~tgk~v~~L~gH~~~-----------VtsVafSP~dg~l----LaSgS~DgtVrLWDl~t 169 (792)
+..++.++. ++.|.-+|. .+|+.+..+...... ...+.+.| .+.. ++.++.|+.|..+|.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEcCCCEEEEEECCC
Confidence 556777777 888999999 899999888643211 12356644 2333 77788999999999999
Q ss_pred CcEEEEeccCC-----Cee-EEEEcCCCcEEEEEc------CCeEEEEECCCCCcc
Q 036953 170 SECIGSCDFYR-----PIA-SIAFHAEGELLAVAS------GHKLYIWPYNNKEEA 213 (792)
Q Consensus 170 g~~v~t~~h~s-----~V~-sVafSpdG~~LasgS------dd~V~IWDlrt~~~~ 213 (792)
|+.++...... .+. .... .++..++.++ ++.|+-+|.++++..
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEE
Confidence 99998874322 111 1111 1444444332 456999999988753
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=87.83 E-value=27 Score=43.73 Aligned_cols=92 Identities=10% Similarity=0.140 Sum_probs=57.7
Q ss_pred eEEEEECCCCcEEEEecC-CCCCcEEEE---EccCCCCEEEEEe----------CCCeEEEEECCCCcE--EEEeccCCC
Q 036953 118 TVKIIDCQTGNCLKVLSG-HRRTPWVVR---FHPLRSEILASGS----------LDHEVRLWDANTSEC--IGSCDFYRP 181 (792)
Q Consensus 118 tVrIWDl~tgk~v~~L~g-H~~~VtsVa---fSP~dg~lLaSgS----------~DgtVrLWDl~tg~~--v~t~~h~s~ 181 (792)
.|++.|..+.+.+..+.- ....+.+++ |..+...+++.|+ ..|.|+++++..++. +.....+++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 366777777766555441 223444544 3332346888776 246799999875433 233356788
Q ss_pred eeEEEEcCCCcEEEEEcCCeEEEEECCCCC
Q 036953 182 IASIAFHAEGELLAVASGHKLYIWPYNNKE 211 (792)
Q Consensus 182 V~sVafSpdG~~LasgSdd~V~IWDlrt~~ 211 (792)
+++++-- +| +|+++-+.+|++|++...+
T Consensus 888 v~al~~~-~g-~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEEEEE-TT-EEEEEETTEEEEEEECTTS
T ss_pred CEEEeee-CC-EEEEEcCCEEEEEECCCCc
Confidence 9888743 34 5666667889999997665
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.33 E-value=33 Score=36.48 Aligned_cols=143 Identities=13% Similarity=0.054 Sum_probs=76.6
Q ss_pred eeeeEEeeCCCceEeecCCCceeecCCcEEEEEeCCCeEEEE-eccCCCcCCCCCCeEEEEEcCC---CCEEEEEEC---
Q 036953 43 YVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWVEAESLRHL-SAKYCPLVPPPRSTIAAAFSPD---GRTLASTHG--- 115 (792)
Q Consensus 43 ~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s~d~sIrvW-d~~t~~L~gH~~~V~sLafSPD---G~~LaSGS~--- 115 (792)
....++|.++++++.+-. ..+|+....++. ..+ +.. ...........|+|+|+ +..|+.+..
T Consensus 30 ~P~~ia~~pdG~l~V~e~--------~g~I~~~d~~G~-~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTER--------PGRLVLISPSGK-KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp CEEEEEEEETTEEEEEET--------TTEEEEECSSCE-EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCeEEEEcCCCeEEEEeC--------CCEEEEEeCCCc-eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 456778888877543321 133443334443 222 111 11122356899999997 555555443
Q ss_pred -C----CeEEEEECCCC--c---E--E-EEecC-CCCCcEEEEEccCCCCEEEEEeCC-------------CeEEEEECC
Q 036953 116 -D----HTVKIIDCQTG--N---C--L-KVLSG-HRRTPWVVRFHPLRSEILASGSLD-------------HEVRLWDAN 168 (792)
Q Consensus 116 -D----GtVrIWDl~tg--k---~--v-~~L~g-H~~~VtsVafSP~dg~lLaSgS~D-------------gtVrLWDl~ 168 (792)
+ ..|..|+.... . . + ..+.. .......+.|.| ++.++++.+.. +.|.-+|..
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 3 56777877644 1 1 1 11221 112346799999 88887775432 455555554
Q ss_pred CC---------cEEEEeccCCCeeEEEEcC-CCcEEEEEc
Q 036953 169 TS---------ECIGSCDFYRPIASIAFHA-EGELLAVAS 198 (792)
Q Consensus 169 tg---------~~v~t~~h~s~V~sVafSp-dG~~LasgS 198 (792)
.. ..+....+ .....++|+| +|+++++-.
T Consensus 178 G~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp SCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEec
Confidence 32 12333333 2346899999 666665543
No 313
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.01 E-value=51 Score=38.31 Aligned_cols=165 Identities=8% Similarity=-0.007 Sum_probs=101.1
Q ss_pred ecCCcEEEEEeCCCeEEEEeccCCCcCC----CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec-----CC
Q 036953 66 RDAKRGLVSWVEAESLRHLSAKYCPLVP----PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS-----GH 136 (792)
Q Consensus 66 ~d~~~~L~S~s~d~sIrvWd~~t~~L~g----H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~-----gH 136 (792)
.+.+..||.+..++ +..+|..+.++.. ....|.++.. .++ .|..++.+ -+..+|..+++.. .+. -.
T Consensus 70 ~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~ 144 (758)
T 3ott_A 70 IIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLP 144 (758)
T ss_dssp EETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCS
T ss_pred EcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcC
Confidence 46677899887654 6788877654432 2234777654 345 56666666 5888998766543 331 12
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-c-----cCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCC
Q 036953 137 RRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSC-D-----FYRPIASIAFHAEGELLAVASGHKLYIWPYNNK 210 (792)
Q Consensus 137 ~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~-~-----h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~ 210 (792)
...|.++.... ++.+.+ ++. +-+..+|..+++..... . ....|.++....++..|..+.+++|..+|..+.
T Consensus 145 ~~~i~~i~~d~-~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTK-DNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECT-TCCEEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTT
T ss_pred CCeEEEEEEcC-CCCEEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCC
Confidence 34688888776 666555 444 45888898776543221 1 122478888887777655565556999998765
Q ss_pred CcccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 036953 211 EEASSPIIVLKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 211 ~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS 241 (792)
+... .... ....|.++....+|...+.+
T Consensus 222 ~~~~--~~~l-~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 222 QIKQ--TEAF-HNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp EEEE--EEEE-EEEEEEEEEECTTCCEEEEE
T ss_pred eEEe--ccCC-CCCeEEEEEEcCCCCEEEEe
Confidence 4221 1111 23458888888888855554
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.04 E-value=16 Score=37.49 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=79.3
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE------EEEec--CCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNC------LKVLS--GHRRTPWVVRFHPLRSEILASGSLDHEVRLWDAN 168 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~------v~~L~--gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~ 168 (792)
.+..++|+|+|...++ .+|.++-.+..+... -..+- +-.. ...+.|.| ++.+.++ .|+.|.-++-.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCCC
Confidence 5679999999997666 667766666544211 12221 2222 57789999 8887777 56999888864
Q ss_pred CCcEE------EEec--cCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCccc---CCeEEe-cCCCCeEEEEEccCCC
Q 036953 169 TSECI------GSCD--FYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEAS---SPIIVL-KTRRSLRAVHFHPHAA 236 (792)
Q Consensus 169 tg~~v------~t~~--h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~~---~~~~~~-~h~~sVtsVafSPdG~ 236 (792)
+.... ..+. .=..+..|.|.|+|.+.++. ++.++-+......... ....+. ..-..-+-+.|.+++.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 42111 1111 11357899999999999998 7765433222111000 011111 1122234466888888
Q ss_pred eEEEE
Q 036953 237 PFVLT 241 (792)
Q Consensus 237 ~LlaS 241 (792)
.+.+.
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55544
No 315
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=81.74 E-value=39 Score=36.83 Aligned_cols=118 Identities=11% Similarity=0.188 Sum_probs=82.4
Q ss_pred CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEE
Q 036953 117 HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAV 196 (792)
Q Consensus 117 GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~Las 196 (792)
..|.|.|+..++.+..-. -...+.-.+| ..+.++.-. .+++.++|+++++.++.+.....|.--.|-.+ +.|+.
T Consensus 49 ~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~l 122 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRP---ISADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 122 (365)
T ss_dssp EEEEEEETTSTTSCEEEE---CCCSEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEE
T ss_pred CEEEEEECCCCCCccccc---cccceeeeCC-CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEE
Confidence 378888998765432221 1122345688 777777665 78899999999999999988888888888644 45555
Q ss_pred EcCCeEEEEECCCCCcccCCeEEec-C----CCCeEEEEEccCCCeEEEEEe
Q 036953 197 ASGHKLYIWPYNNKEEASSPIIVLK-T----RRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 197 gSdd~V~IWDlrt~~~~~~~~~~~~-h----~~sVtsVafSPdG~~LlaS~s 243 (792)
-.+..|+-|++..... |...+. | ...|..-..+++.+++++.+-
T Consensus 123 VT~taVyHWs~~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 123 VTDNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp EESSEEEEEESSTTCC---CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred EcCCcEEEEcccCCCC---CceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 5667799999976332 322322 2 456888888999998887663
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.06 E-value=12 Score=40.45 Aligned_cols=110 Identities=17% Similarity=0.260 Sum_probs=65.5
Q ss_pred EecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE--EEe-----ccCCCeeEEEEcCC---CcEEEEE----
Q 036953 132 VLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECI--GSC-----DFYRPIASIAFHAE---GELLAVA---- 197 (792)
Q Consensus 132 ~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v--~t~-----~h~s~V~sVafSpd---G~~Lasg---- 197 (792)
.+...-...+.++|.| ++.++++--..+.|++++..+++.. ..+ ........|+++|+ +..|++.
T Consensus 26 ~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 3433345678999999 8887777655899999987666542 222 13456889999996 3444443
Q ss_pred cCCeEEEEECCCCC----cccCCeEE---ec--CCCCeEEEEEccCCCeEEEEE
Q 036953 198 SGHKLYIWPYNNKE----EASSPIIV---LK--TRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 198 Sdd~V~IWDlrt~~----~~~~~~~~---~~--h~~sVtsVafSPdG~~LlaS~ 242 (792)
.+++|.-|.+.... .......+ .. ....-..+.|.|||..+++.+
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 24457777765421 11111111 11 122345699999997444444
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.41 E-value=99 Score=35.86 Aligned_cols=168 Identities=11% Similarity=0.007 Sum_probs=98.7
Q ss_pred CCcEEEEEeCCCeEEEEeccCCCcCC--------CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEe-cC---
Q 036953 68 AKRGLVSWVEAESLRHLSAKYCPLVP--------PPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVL-SG--- 135 (792)
Q Consensus 68 ~~~~L~S~s~d~sIrvWd~~t~~L~g--------H~~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L-~g--- 135 (792)
.+..+|.+..+ -|..++..+.++.. ....|.++....++...+ |..+| +..+|..+++..... ..
T Consensus 111 ~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~ 187 (758)
T 3ott_A 111 QGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSS 187 (758)
T ss_dssp ETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTT
T ss_pred cCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccc
Confidence 35567877665 56677765443211 134688888887787655 45544 778887766533211 11
Q ss_pred -CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-cCCCeeEEEEcCCCcEEEEEcCCeEEEEECCCCCcc
Q 036953 136 -HRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD-FYRPIASIAFHAEGELLAVASGHKLYIWPYNNKEEA 213 (792)
Q Consensus 136 -H~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~-h~s~V~sVafSpdG~~LasgSdd~V~IWDlrt~~~~ 213 (792)
....|.++.... ++..|-.++. +-+..+|..+++...... ....|.++....+|.+.+.. +++|.++|..+.+..
T Consensus 188 ~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~ 264 (758)
T 3ott_A 188 QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQ 264 (758)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TTEEEEECCTTSCCE
T ss_pred cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CCceeEEecCCCcEE
Confidence 123478887776 5554444443 468889988765432211 23457888888888766655 567999998665421
Q ss_pred cCCeEE----ecCCCCeEEEEEccCCCeEEEE
Q 036953 214 SSPIIV----LKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 214 ~~~~~~----~~h~~sVtsVafSPdG~~LlaS 241 (792)
...... .-....|.++....+|...+.+
T Consensus 265 ~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 265 HIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred EEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 100000 0023458899888888855544
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=78.27 E-value=17 Score=37.30 Aligned_cols=99 Identities=17% Similarity=0.231 Sum_probs=62.5
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE------EEEe---ccCCCeeEEEEcCCCcEEEEEcCCeEEEEECC
Q 036953 138 RTPWVVRFHPLRSEILASGSLDHEVRLWDANTSEC------IGSC---DFYRPIASIAFHAEGELLAVASGHKLYIWPYN 208 (792)
Q Consensus 138 ~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~------v~t~---~h~s~V~sVafSpdG~~LasgSdd~V~IWDlr 208 (792)
..++.++|+| ++.+.+. .++.+.-.+..+.+. -..+ .... ...+.|+++|.+.++ +++.|+-++-.
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav-~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV-SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE-ETTEEEEESCC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe-CCCEEEEeCCC
Confidence 4678999999 8886666 677777767655221 1122 2222 678999999998888 77878877753
Q ss_pred CCCccc---CCeEE-ecCCCCeEEEEEccCCCeEEEE
Q 036953 209 NKEEAS---SPIIV-LKTRRSLRAVHFHPHAAPFVLT 241 (792)
Q Consensus 209 t~~~~~---~~~~~-~~h~~sVtsVafSPdG~~LlaS 241 (792)
+..... ....+ ...=..+..|.|.|+|...+++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 332211 00111 1112467999999999955444
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=77.70 E-value=23 Score=39.27 Aligned_cols=104 Identities=11% Similarity=0.190 Sum_probs=60.6
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE--Eec-------cCCCeeEEEEcCC---CcEEEEEc-C-----
Q 036953 138 RTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIG--SCD-------FYRPIASIAFHAE---GELLAVAS-G----- 199 (792)
Q Consensus 138 ~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~--t~~-------h~s~V~sVafSpd---G~~LasgS-d----- 199 (792)
...++++|.| +++++++-...+.|++++..+++... .+. ....+..|+|+|+ +..|+++. .
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4568999999 88877765444579988876554332 221 2356779999995 55554443 1
Q ss_pred --------CeEEEEECCCCC-cccCCeEE---ec--CCCCeEEEEEccCCCeEEEEE
Q 036953 200 --------HKLYIWPYNNKE-EASSPIIV---LK--TRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 200 --------d~V~IWDlrt~~-~~~~~~~~---~~--h~~sVtsVafSPdG~~LlaS~ 242 (792)
..|.-|++.... .......+ .. .......++|.|||..+++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 236666654321 11001111 11 123478999999998444443
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=77.65 E-value=86 Score=34.15 Aligned_cols=180 Identities=7% Similarity=0.063 Sum_probs=104.4
Q ss_pred CCCceEeeecccceeeCC--CCceeeeEEeeCCCce-EeecCCCceeecCCcEEEEEe-CCCeEEEEeccCCCcCCCCCC
Q 036953 22 RRRARNVSRLLAHREISP--KTKYVPKRQWVDASKL-KTCGPSDSSVRDAKRGLVSWV-EAESLRHLSAKYCPLVPPPRS 97 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels~--~tk~V~s~aWspd~~l-la~G~~a~sv~d~~~~L~S~s-~d~sIrvWd~~t~~L~gH~~~ 97 (792)
+....+||++..+..++. ....+.--.|..+..+ +-+. ....-|+.. +....++++-.. .|. ...
T Consensus 85 ag~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~--------taVyHWs~~~~s~P~kvFdR~~-~L~--~~Q 153 (365)
T 2xzh_A 85 AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQPVKMFDRHS-SLA--GCQ 153 (365)
T ss_dssp ETTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEES--------SEEEEEESSTTCCCEEEEECCG-GGT--TCE
T ss_pred cCCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcC--------CcEEEEcccCCCCCceeeecch-hcc--cce
Confidence 467788999988877762 2345666677766554 2222 111222221 234455555432 222 345
Q ss_pred eEEEEEcCCCCEEEEEEC-------CCeEEEEECCCCcEEEEecCCCCCcEEEEEcc--CCCCEEEEEeCC---CeEEEE
Q 036953 98 TIAAAFSPDGRTLASTHG-------DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHP--LRSEILASGSLD---HEVRLW 165 (792)
Q Consensus 98 V~sLafSPDG~~LaSGS~-------DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP--~dg~lLaSgS~D---gtVrLW 165 (792)
|..-+.+++.++++..+- .|.+.+|..+. +..+.++||......+.+.- ...++++.+... +++++-
T Consensus 154 IInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIi 232 (365)
T 2xzh_A 154 IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 232 (365)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 788888899998765542 37788999764 45677888876544433321 112344444332 578888
Q ss_pred ECCCC---c------EEEEe-c---cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcc
Q 036953 166 DANTS---E------CIGSC-D---FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 166 Dl~tg---~------~v~t~-~---h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~ 213 (792)
++... . .+..+ . ..+..-++..++....++.-. .+-|++||+.++...
T Consensus 233 Ei~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 233 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp ECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred EcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 88432 1 11111 1 234455777777666666655 455999999999854
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=74.41 E-value=52 Score=37.18 Aligned_cols=118 Identities=11% Similarity=0.188 Sum_probs=81.9
Q ss_pred CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEE
Q 036953 117 HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAV 196 (792)
Q Consensus 117 GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~Las 196 (792)
..|.|.|+..++.+..-. -...+.-.+| ..+.++.=. ..++.++|+++++.++.+.....|.--.|-.+ +.|+.
T Consensus 48 ~~vvIiDl~~~~~~~rrp---i~AdsAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~l 121 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRP---ISADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 121 (494)
T ss_dssp CEEEEEETTSTTSCEEEE---CCCSEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEE
T ss_pred CeEEEEECCCCCcceecc---cccceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEEE
Confidence 478888988765432221 1223456788 667666654 78999999999999999987778877777544 45666
Q ss_pred EcCCeEEEEECCCCCcccCCeEEec-C----CCCeEEEEEccCCCeEEEEEe
Q 036953 197 ASGHKLYIWPYNNKEEASSPIIVLK-T----RRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 197 gSdd~V~IWDlrt~~~~~~~~~~~~-h----~~sVtsVafSPdG~~LlaS~s 243 (792)
-++..|+-|++..... |...+. | ...|..-..++++++++..+=
T Consensus 122 VT~taVyHWsi~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 122 VTDNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp ECSSEEEEEESSSSCC---CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred EcCCeeEEecccCCCC---chhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 6667799999976332 332322 2 456888888999998887663
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=73.86 E-value=1.2e+02 Score=34.17 Aligned_cols=181 Identities=8% Similarity=0.071 Sum_probs=105.4
Q ss_pred CCCceEeeecccceeeCC--CCceeeeEEeeCCCceEeecCCCceeecCCcEEEEEe-CCCeEEEEeccCCCcCCCCCCe
Q 036953 22 RRRARNVSRLLAHREISP--KTKYVPKRQWVDASKLKTCGPSDSSVRDAKRGLVSWV-EAESLRHLSAKYCPLVPPPRST 98 (792)
Q Consensus 22 ~s~~r~V~~l~~~rels~--~tk~V~s~aWspd~~lla~G~~a~sv~d~~~~L~S~s-~d~sIrvWd~~t~~L~gH~~~V 98 (792)
+....+||++..+..++. ....+.--.|..+..+--.. +....-|+.. +...+++++-.. .|. ...|
T Consensus 84 ag~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT-------~taVyHWsi~~~s~P~kvFdR~~-~L~--~~QI 153 (494)
T 1bpo_A 84 AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-------DNAVYHWSMEGESQPVKMFDRHS-SLA--GCQI 153 (494)
T ss_dssp ETTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC-------SSEEEEEESSSSCCCEEEEECCG-GGT--TCEE
T ss_pred cCCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc-------CCeeEEecccCCCCchhheecch-hcc--cceE
Confidence 467788888888777762 22356666776665542111 1111222221 223455555432 222 3458
Q ss_pred EEEEEcCCCCEEEEEEC-------CCeEEEEECCCCcEEEEecCCCCCcEEEEEcc--CCCCEEEEEeCC---CeEEEEE
Q 036953 99 IAAAFSPDGRTLASTHG-------DHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHP--LRSEILASGSLD---HEVRLWD 166 (792)
Q Consensus 99 ~sLafSPDG~~LaSGS~-------DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP--~dg~lLaSgS~D---gtVrLWD 166 (792)
..-..+++.++++..+- .|.+.+|..+. +..+.++||......+.+.- ....+++.+... +++++-+
T Consensus 154 InY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~E 232 (494)
T 1bpo_A 154 INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (494)
T ss_dssp EEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 88888999998875432 47788999764 44677888876655544432 112345555443 6899998
Q ss_pred CCCC---------cEEEEe-c---cCCCeeEEEEcCCCcEEEEEc-CCeEEEEECCCCCcc
Q 036953 167 ANTS---------ECIGSC-D---FYRPIASIAFHAEGELLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 167 l~tg---------~~v~t~-~---h~s~V~sVafSpdG~~LasgS-dd~V~IWDlrt~~~~ 213 (792)
+... +.+..+ . ..+...++..++....++.-. .+-|++||+.++...
T Consensus 233 i~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 8532 111111 1 234455777777766666655 455999999999854
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=71.67 E-value=33 Score=35.92 Aligned_cols=126 Identities=6% Similarity=-0.023 Sum_probs=74.9
Q ss_pred EEEcCCCCEEEEEECC--------------CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEe----CCCeE
Q 036953 101 AAFSPDGRTLASTHGD--------------HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGS----LDHEV 162 (792)
Q Consensus 101 LafSPDG~~LaSGS~D--------------GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS----~DgtV 162 (792)
--+++++.+|+.+... ..|+..++..++...... . . +..|++ +++.|+-.. .+..|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-~--~--~~~~s~-~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-D--P--CIYASL-IGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-S--C--EEEEEE-ETTEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-C--C--ccEEEE-eCCEEEEEeecCCCCceE
Confidence 3467789988877543 467778887665433322 1 1 236777 666766654 33456
Q ss_pred EEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEEEcC--CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEE
Q 036953 163 RLWDANTSECIGSCDFYRPIASIAFHAEGELLAVASG--HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVL 240 (792)
Q Consensus 163 rLWDl~tg~~v~t~~h~s~V~sVafSpdG~~LasgSd--d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~Lla 240 (792)
..-++..........+.. ..|+++++.|+-.++ ..|+..++...... .+.. .... ..++|++.+|+.
T Consensus 132 y~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~----~l~~--~~~~-~~~~P~g~~iy~ 200 (302)
T 3s25_A 132 YRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA----LFYD--CNCY-KPVVLDDTNVYY 200 (302)
T ss_dssp EEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE----EEEC--SCEE-EEEEEETTEEEE
T ss_pred EEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE----EEeC--CCcc-ceeeecCCEEEE
Confidence 666776544433333322 346778888887764 34888888766532 1222 2223 246699998887
Q ss_pred EEe
Q 036953 241 TAE 243 (792)
Q Consensus 241 S~s 243 (792)
+..
T Consensus 201 t~~ 203 (302)
T 3s25_A 201 MDV 203 (302)
T ss_dssp EEG
T ss_pred EEc
Confidence 653
No 324
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.62 E-value=53 Score=36.66 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=63.0
Q ss_pred CeEEEEEcCCCC-EEEEEECCCeEEEEECCCC---cEEEEec-----C----CCCCcEEEEEccC---CCCEEEEEeCC-
Q 036953 97 STIAAAFSPDGR-TLASTHGDHTVKIIDCQTG---NCLKVLS-----G----HRRTPWVVRFHPL---RSEILASGSLD- 159 (792)
Q Consensus 97 ~V~sLafSPDG~-~LaSGS~DGtVrIWDl~tg---k~v~~L~-----g----H~~~VtsVafSP~---dg~lLaSgS~D- 159 (792)
....|+|.|||. +|+++...|.|++++.... ..+..+. + ..+...+|+|+|+ ++.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 367999999996 5666788999999975432 1222222 1 1456789999982 24455543321
Q ss_pred -----------CeEEEEECCC----------CcEEEEec---cCCCeeEEEEcCCCcEEEEEcCC
Q 036953 160 -----------HEVRLWDANT----------SECIGSCD---FYRPIASIAFHAEGELLAVASGH 200 (792)
Q Consensus 160 -----------gtVrLWDl~t----------g~~v~t~~---h~s~V~sVafSpdG~~LasgSdd 200 (792)
..|.-|.+.. .+.+..+. .......|.|.|||.+.++.++.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1344465532 12333332 23456789999999877777654
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=62.20 E-value=3.1e+02 Score=34.26 Aligned_cols=107 Identities=13% Similarity=0.093 Sum_probs=66.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE--EEecCCCCCcEEEEEccC-----CCCEEEEEeC-CCeEEEEEC
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCL--KVLSGHRRTPWVVRFHPL-----RSEILASGSL-DHEVRLWDA 167 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v--~~L~gH~~~VtsVafSP~-----dg~lLaSgS~-DgtVrLWDl 167 (792)
..|...+.+ +.+++.++ ++.+.++.+..++.. ... .-...|.|+++.|. ..++++.|.. |++|+++++
T Consensus 514 ~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 514 KNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 356666655 34666665 577888887765422 121 23457999999762 2478999986 999999999
Q ss_pred CCCcEEEEecc--CCCeeEEEEcC--CCcEEEEEc-CCeEEEEE
Q 036953 168 NTSECIGSCDF--YRPIASIAFHA--EGELLAVAS-GHKLYIWP 206 (792)
Q Consensus 168 ~tg~~v~t~~h--~s~V~sVafSp--dG~~LasgS-dd~V~IWD 206 (792)
.+.+.+....- .....++.+.. ...+|..+- ++.+.-+.
T Consensus 590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 98776655432 33555554432 235677766 44443333
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=62.18 E-value=1.2e+02 Score=30.41 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=57.9
Q ss_pred CCCEEEEEECC----CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC------CeEEEEECCCCcEE
Q 036953 106 DGRTLASTHGD----HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD------HEVRLWDANTSECI 173 (792)
Q Consensus 106 DG~~LaSGS~D----GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D------gtVrLWDl~tg~~v 173 (792)
+++.++.|+.+ ..+.+||..+++-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56677777654 6788999887753222 2211112222222 56788888765 46889999887644
Q ss_pred EEec--cCCCeeEEEEcCCCcEEEEEc----------CCeEEEEECCCCC
Q 036953 174 GSCD--FYRPIASIAFHAEGELLAVAS----------GHKLYIWPYNNKE 211 (792)
Q Consensus 174 ~t~~--h~s~V~sVafSpdG~~LasgS----------dd~V~IWDlrt~~ 211 (792)
..-. ....-.++.. -++++++.|+ .+.+.+||..+.+
T Consensus 132 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred eCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 3321 1111112222 2666666665 1238899987765
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=60.81 E-value=8.7 Score=41.49 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=65.7
Q ss_pred CEEEEEECCCeEEEEECCCCcEEEEecCC-CCCcEEEEEc--cCCCCEEEEE-eCCCeEEEEECCCCcEEEEec-----c
Q 036953 108 RTLASTHGDHTVKIIDCQTGNCLKVLSGH-RRTPWVVRFH--PLRSEILASG-SLDHEVRLWDANTSECIGSCD-----F 178 (792)
Q Consensus 108 ~~LaSGS~DGtVrIWDl~tgk~v~~L~gH-~~~VtsVafS--P~dg~lLaSg-S~DgtVrLWDl~tg~~v~t~~-----h 178 (792)
..++.++.||.|.-+|..+|+..+.++.. ..++....-. +.++..++.. +.||.|..+|..+|.....+. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999999998754 1222221100 1122333333 589999999999886655542 2
Q ss_pred CCCeeE---EEE-c----CCCcEEEEEc-CCeEEEEECCCCCcc
Q 036953 179 YRPIAS---IAF-H----AEGELLAVAS-GHKLYIWPYNNKEEA 213 (792)
Q Consensus 179 ~s~V~s---Vaf-S----pdG~~LasgS-dd~V~IWDlrt~~~~ 213 (792)
.+++.. ... . -.+..+++++ +++++-.|+++++..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 223221 000 0 0344566666 566999999998854
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=60.68 E-value=1.1e+02 Score=30.49 Aligned_cols=101 Identities=19% Similarity=0.231 Sum_probs=56.9
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcEE
Q 036953 106 DGRTLASTHGD-----HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSECI 173 (792)
Q Consensus 106 DG~~LaSGS~D-----GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~v 173 (792)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 67777777654 4688999887653222 1111111222322 56788888764 46899999887654
Q ss_pred EEec--cCC-CeeEEEEcCCCcEEEEEc-C-----CeEEEEECCCCC
Q 036953 174 GSCD--FYR-PIASIAFHAEGELLAVAS-G-----HKLYIWPYNNKE 211 (792)
Q Consensus 174 ~t~~--h~s-~V~sVafSpdG~~LasgS-d-----d~V~IWDlrt~~ 211 (792)
..-. ... ....+.+ ++++++.|+ + +.+.+||..+.+
T Consensus 236 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 236 TVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 3321 111 1122222 666777765 2 237888887654
No 329
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=58.71 E-value=1.2e+02 Score=31.50 Aligned_cols=125 Identities=9% Similarity=0.027 Sum_probs=74.2
Q ss_pred EEEcCCCCEEEEEE----CCCeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeC-CCeEEEEECCCCcEEEE
Q 036953 101 AAFSPDGRTLASTH----GDHTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSL-DHEVRLWDANTSECIGS 175 (792)
Q Consensus 101 LafSPDG~~LaSGS----~DGtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~-DgtVrLWDl~tg~~v~t 175 (792)
..|++++++|+-.. .+..|...+++... ...+..+.. ..|++ +++.|+-.+. ..+|..-++..+.....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 36778899888776 34456666776444 334443432 34566 5556654444 67888888877655444
Q ss_pred eccCCCeeEEEEcCCCcEEEEEc-C--CeEEEEECCCCCcccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 036953 176 CDFYRPIASIAFHAEGELLAVAS-G--HKLYIWPYNNKEEASSPIIVLKTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 176 ~~h~s~V~sVafSpdG~~LasgS-d--d~V~IWDlrt~~~~~~~~~~~~h~~sVtsVafSPdG~~LlaS~ 242 (792)
+. .... ..++|++.+|+-.. . ..|..-++...... .+. ...+ ..|+|+++.|..+.
T Consensus 183 ~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~----~Lt--~~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 183 YD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV----VLT--EANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp EC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE----ECS--CSCE--EEEEEETTEEEEEE
T ss_pred eC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE----EEe--CCCc--ceEEECCCEEEEEE
Confidence 33 2222 33568888877665 2 24777777665532 121 2233 34888999887653
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=58.38 E-value=25 Score=40.78 Aligned_cols=101 Identities=17% Similarity=0.212 Sum_probs=67.4
Q ss_pred CCeEEEEEcCCCCEEEEEEC-CCeEEEEECCC------CcE-------EEEecCCCCCcEEEEEccCCCCEEEEEeCCCe
Q 036953 96 RSTIAAAFSPDGRTLASTHG-DHTVKIIDCQT------GNC-------LKVLSGHRRTPWVVRFHPLRSEILASGSLDHE 161 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~-DGtVrIWDl~t------gk~-------v~~L~gH~~~VtsVafSP~dg~lLaSgS~Dgt 161 (792)
.....+.++|||++++.++. +.++.++|+.. ++. +...+ -.-.....+|.+ ++....|.-.|.+
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 44567889999999987764 78999999863 111 22222 334567789999 7866667779999
Q ss_pred EEEEECCCC----------cEEEEeccCCCeeEEEE------cCCCcEEEEEc
Q 036953 162 VRLWDANTS----------ECIGSCDFYRPIASIAF------HAEGELLAVAS 198 (792)
Q Consensus 162 VrLWDl~tg----------~~v~t~~h~s~V~sVaf------SpdG~~LasgS 198 (792)
|..|++... ..+..+...-.+-.+.- .++|++|++..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999998753 34444432222222222 57889998875
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=57.04 E-value=1.9e+02 Score=30.32 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=55.6
Q ss_pred CCCeEEEEEcCC---CCEEEEEE-C-------CCeEEEEECCCC-----cEEEEecC------CCCCcEEEEEccCCCCE
Q 036953 95 PRSTIAAAFSPD---GRTLASTH-G-------DHTVKIIDCQTG-----NCLKVLSG------HRRTPWVVRFHPLRSEI 152 (792)
Q Consensus 95 ~~~V~sLafSPD---G~~LaSGS-~-------DGtVrIWDl~tg-----k~v~~L~g------H~~~VtsVafSP~dg~l 152 (792)
......++|+|+ +.+|+.+. . ...|..|++..+ .....+.. .......+.|.| ++.+
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~L 143 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYL 143 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcE
Confidence 456789999996 55555443 2 235666666533 11111211 111235799999 8877
Q ss_pred EEEEeCC-------------CeEEEEECCCC--------------cEEEEeccCCCeeEEEEcC-CCcEEEEE
Q 036953 153 LASGSLD-------------HEVRLWDANTS--------------ECIGSCDFYRPIASIAFHA-EGELLAVA 197 (792)
Q Consensus 153 LaSgS~D-------------gtVrLWDl~tg--------------~~v~t~~h~s~V~sVafSp-dG~~Lasg 197 (792)
+++.+.. +.|.-+|.... ..+....+ .....++|++ +|+++++-
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEe
Confidence 7776442 45666666532 11222222 3367899999 56655543
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=56.94 E-value=1.6e+02 Score=29.37 Aligned_cols=102 Identities=21% Similarity=0.227 Sum_probs=55.5
Q ss_pred CCCEEEEEECC-------CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCc
Q 036953 106 DGRTLASTHGD-------HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSE 171 (792)
Q Consensus 106 DG~~LaSGS~D-------GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~ 171 (792)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 56666666532 3588899887653222 2111111222222 56788888765 468899998876
Q ss_pred EEEEecc--CCCeeEEEEcCCCcEEEEEc-C-----CeEEEEECCCCC
Q 036953 172 CIGSCDF--YRPIASIAFHAEGELLAVAS-G-----HKLYIWPYNNKE 211 (792)
Q Consensus 172 ~v~t~~h--~s~V~sVafSpdG~~LasgS-d-----d~V~IWDlrt~~ 211 (792)
....-.. ...-..+.. -++++++.|+ + +.+.+||..+.+
T Consensus 232 W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 232 WRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 5433221 111111222 2566777665 2 227888887654
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=55.07 E-value=1.7e+02 Score=29.19 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=56.7
Q ss_pred CCCEEEEEECC------CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeC---------CCeEEEEECC
Q 036953 106 DGRTLASTHGD------HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSL---------DHEVRLWDAN 168 (792)
Q Consensus 106 DG~~LaSGS~D------GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~---------DgtVrLWDl~ 168 (792)
+++.++.|+.+ ..+.+||..+.+-... +.........+.+ ++++++.|+. -..+.+||+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCC
Confidence 56777777654 4688999887653222 1111111222222 5677777764 3458899998
Q ss_pred CCcEEEEec--cCCCeeEEEEcCCCcEEEEEcC------CeEEEEECCCCC
Q 036953 169 TSECIGSCD--FYRPIASIAFHAEGELLAVASG------HKLYIWPYNNKE 211 (792)
Q Consensus 169 tg~~v~t~~--h~s~V~sVafSpdG~~LasgSd------d~V~IWDlrt~~ 211 (792)
+.+....-. ....-.++... ++++++.|+. +.+.+||..+.+
T Consensus 178 ~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 178 TETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 876443322 11111122222 6677777651 238999998765
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=53.28 E-value=1.6e+02 Score=29.59 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=55.7
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcEE
Q 036953 106 DGRTLASTHGD-----HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSECI 173 (792)
Q Consensus 106 DG~~LaSGS~D-----GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~v 173 (792)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 56677777654 4588899877642211 1111112222333 56788888765 56899999887644
Q ss_pred EEec--cCCCeeEEEEcCCCcEEEEEc-C-----CeEEEEECCCCC
Q 036953 174 GSCD--FYRPIASIAFHAEGELLAVAS-G-----HKLYIWPYNNKE 211 (792)
Q Consensus 174 ~t~~--h~s~V~sVafSpdG~~LasgS-d-----d~V~IWDlrt~~ 211 (792)
..-. ....-.++.. -++++++.|+ + +.+.+||..+.+
T Consensus 245 ~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 245 FVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 3321 1111112222 2566777665 1 237788876654
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=51.87 E-value=52 Score=40.20 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=33.8
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec
Q 036953 96 RSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS 134 (792)
Q Consensus 96 ~~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~ 134 (792)
..+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 357788888888999999999999999999999887653
No 336
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=49.45 E-value=2.1e+02 Score=28.44 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=56.9
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCcEE--EEecCCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcEE
Q 036953 106 DGRTLASTHGD-----HTVKIIDCQTGNCL--KVLSGHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSECI 173 (792)
Q Consensus 106 DG~~LaSGS~D-----GtVrIWDl~tgk~v--~~L~gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~v 173 (792)
+++.++.|+.+ ..+.+||+.+.+-. ..+.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 56667777643 36888998776532 222211112222222 56788887765 45889999887654
Q ss_pred EEec--cCCCeeEEEEcCCCcEEEEEcC------CeEEEEECCCCC
Q 036953 174 GSCD--FYRPIASIAFHAEGELLAVASG------HKLYIWPYNNKE 211 (792)
Q Consensus 174 ~t~~--h~s~V~sVafSpdG~~LasgSd------d~V~IWDlrt~~ 211 (792)
..-. ....-.++.. -++++++.|+. +.+.+||+.+.+
T Consensus 189 ~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 189 NVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp EECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 4321 1111112222 25667777652 238999987765
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=49.20 E-value=3.6e+02 Score=34.96 Aligned_cols=147 Identities=14% Similarity=0.129 Sum_probs=86.4
Q ss_pred CCceeecCCcEEEEEeCCCeEEEEeccCC-CcCCCC--CCeEEEEEcCCCCEEEEEECCCeEEEEECCC-CcEEEEecCC
Q 036953 61 SDSSVRDAKRGLVSWVEAESLRHLSAKYC-PLVPPP--RSTIAAAFSPDGRTLASTHGDHTVKIIDCQT-GNCLKVLSGH 136 (792)
Q Consensus 61 ~a~sv~d~~~~L~S~s~d~sIrvWd~~t~-~L~gH~--~~V~sLafSPDG~~LaSGS~DGtVrIWDl~t-gk~v~~L~gH 136 (792)
.++++.+....++..-.+.++.+++..+. +++.|. ..|.-=.|- +.+.|+--+ +..|+-|++.. ..+++.|.-|
T Consensus 68 AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWi-s~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 68 ADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred chhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEec-CCCeeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 34555566677888888999999999765 455543 345554555 344444433 45799999963 3455555544
Q ss_pred ----CCCcEEEEEccCCCCEEEEEe-------CCCeEEEEECCCCcEEEEeccCCCeeEEEEc---CCCcEEEEEc----
Q 036953 137 ----RRTPWVVRFHPLRSEILASGS-------LDHEVRLWDANTSECIGSCDFYRPIASIAFH---AEGELLAVAS---- 198 (792)
Q Consensus 137 ----~~~VtsVafSP~dg~lLaSgS-------~DgtVrLWDl~tg~~v~t~~h~s~V~sVafS---pdG~~LasgS---- 198 (792)
...|..-+.++ +.++++..| ..|.+.+|.++.+.....-+|-.....+... +....++.+.
T Consensus 146 ~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34566667777 777877554 3477888888765433222333333222221 1122333333
Q ss_pred CCeEEEEECCCC
Q 036953 199 GHKLYIWPYNNK 210 (792)
Q Consensus 199 dd~V~IWDlrt~ 210 (792)
+++++|.++...
T Consensus 225 g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 225 GGKLHIIEVGTP 236 (1630)
T ss_pred CceEEEEecCCC
Confidence 256999999654
No 338
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=45.81 E-value=14 Score=33.42 Aligned_cols=68 Identities=22% Similarity=0.461 Sum_probs=35.7
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. ..-.+. +|.-... ..+.....++|.+++. -.|+.|++.-
T Consensus 29 GsLIs~~~VLTAAHC~~~-----~~~~v~--~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 94 (131)
T 1yph_C 29 GSLINENWVVTAAHCGVT-----TSDVVV--AGEFDQG-------SSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLS 94 (131)
T ss_dssp EEEEETTEEEECGGGCCC-----TTSEEE--ESCSBTT-------CSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEES
T ss_pred EEEeeCCEEEECHHHCCC-----CCeEEE--EeEccCC-------CCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEEC
Confidence 4444444 7899999864 222333 3332210 1122345666777653 2567777654
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 95 ~~~~~~~~v~picL 108 (131)
T 1yph_C 95 TAASFSQTVSAVCL 108 (131)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CcccCCCcCcceEC
Confidence 3332 35666665
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=45.70 E-value=3.8e+02 Score=31.09 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=60.2
Q ss_pred CCCEEEEEECC------CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCCC--eEEEEECCCCcEEEE
Q 036953 106 DGRTLASTHGD------HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLDH--EVRLWDANTSECIGS 175 (792)
Q Consensus 106 DG~~LaSGS~D------GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~Dg--tVrLWDl~tg~~v~t 175 (792)
+++.++.|+.+ ..+.+||..+.+-... +.. ...-.+++.-. ++++++.|+.++ .+.+||+.+.+....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~-~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH-TRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-CCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-CcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 67777777643 3578889877542211 111 11112233323 678888888655 689999988764432
Q ss_pred ec------cCCCeeEEEEcCC-CcEEEEEcC--------CeEEEEECCCCC
Q 036953 176 CD------FYRPIASIAFHAE-GELLAVASG--------HKLYIWPYNNKE 211 (792)
Q Consensus 176 ~~------h~s~V~sVafSpd-G~~LasgSd--------d~V~IWDlrt~~ 211 (792)
-. .......+.+..+ +++++.|+. +.+.+||+.+.+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 21 1112233555555 667777652 238999998776
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=45.49 E-value=2.5e+02 Score=28.23 Aligned_cols=102 Identities=9% Similarity=0.048 Sum_probs=54.7
Q ss_pred CCCEEEEEEC-C-----CeEEEEECCCCcEEE--EecCCCCCcEEEEEccCCCCEEEEEeCCC-----eEEEEECCCCcE
Q 036953 106 DGRTLASTHG-D-----HTVKIIDCQTGNCLK--VLSGHRRTPWVVRFHPLRSEILASGSLDH-----EVRLWDANTSEC 172 (792)
Q Consensus 106 DG~~LaSGS~-D-----GtVrIWDl~tgk~v~--~L~gH~~~VtsVafSP~dg~lLaSgS~Dg-----tVrLWDl~tg~~ 172 (792)
+++.++.|+. + ..+.+||..+.+-.. .+.........+.+ ++++++.|+.++ .+.+||+.+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 5667777765 2 468899988764221 11111111222222 568888888654 588899988754
Q ss_pred EEEec--cCCCeeEEEEcCCCcEEEEEcC---------------CeEEEEECCCCC
Q 036953 173 IGSCD--FYRPIASIAFHAEGELLAVASG---------------HKLYIWPYNNKE 211 (792)
Q Consensus 173 v~t~~--h~s~V~sVafSpdG~~LasgSd---------------d~V~IWDlrt~~ 211 (792)
...-. ....-.++.. -++++++.|+. +.+.+||..+.+
T Consensus 225 ~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 225 APFEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EECCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 43322 1111112222 25666666652 126777776654
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=44.42 E-value=61 Score=39.52 Aligned_cols=38 Identities=24% Similarity=0.386 Sum_probs=32.5
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD 177 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~ 177 (792)
.+.++...+ +..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 456677776 77899999999999999999999998864
No 342
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=43.70 E-value=9.5 Score=37.99 Aligned_cols=76 Identities=20% Similarity=0.295 Sum_probs=42.2
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---eCCceeEEeecCCC--
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---VSDMELVRVLPSAE-- 739 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 739 (792)
|.++..+ .++||||+..-...+..-.+.+|.-.+.. ...+.....+.|.+++. -.|+.|++.-....
T Consensus 26 GtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~-------~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~ 98 (234)
T 2asu_B 26 GSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNP-------QHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLN 98 (234)
T ss_dssp EEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSC-------CTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCS
T ss_pred EEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccC-------CCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCC
Confidence 4445444 78999999653333444444444322221 11133455667777754 35888888654433
Q ss_pred CceeeEEec
Q 036953 740 DEVNVACFH 748 (792)
Q Consensus 740 ~~~n~~~~~ 748 (792)
+.|.-+|.-
T Consensus 99 ~~v~picLp 107 (234)
T 2asu_B 99 QRVALICLP 107 (234)
T ss_dssp SSSCCCBCC
T ss_pred CcEeccCCC
Confidence 456667764
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=43.43 E-value=90 Score=36.33 Aligned_cols=71 Identities=8% Similarity=0.190 Sum_probs=50.0
Q ss_pred CCcEEEEEccCCCCEEEEEe-CCCeEEEEECCC------CcE-------EEEeccCCCeeEEEEcCCCcEEEEEc-CCeE
Q 036953 138 RTPWVVRFHPLRSEILASGS-LDHEVRLWDANT------SEC-------IGSCDFYRPIASIAFHAEGELLAVAS-GHKL 202 (792)
Q Consensus 138 ~~VtsVafSP~dg~lLaSgS-~DgtVrLWDl~t------g~~-------v~t~~h~s~V~sVafSpdG~~LasgS-dd~V 202 (792)
....++.++| |+++++.++ .+.++.++|+++ .+. .......-.....+|+++|....+-. +..|
T Consensus 323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 3456789999 888777665 688999999874 111 33334555677899999994444444 7779
Q ss_pred EEEECCC
Q 036953 203 YIWPYNN 209 (792)
Q Consensus 203 ~IWDlrt 209 (792)
--|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999965
No 344
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=42.02 E-value=14 Score=36.63 Aligned_cols=67 Identities=25% Similarity=0.447 Sum_probs=38.5
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-------------------
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR------------------- 725 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 725 (792)
|.++..+ .++||||+. ..+.+-+|..... ..+....++.|.+++.
T Consensus 28 GsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~ 92 (237)
T 1gvz_A 28 GVLVHPQWVLTAAHCMS--------DDYQIWLGRHNLS-------KDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDD 92 (237)
T ss_dssp EEEEETTEEEECGGGCC--------SSCEEEESCSBTT-------SCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSC
T ss_pred eEEeeCCEEEEcHHhCC--------CCCeEEEeecccc-------cCCCCceEEEeeeEecCCccCcccccccccccccc
Confidence 5555555 789999985 2233444543321 1123345677777654
Q ss_pred -eCCceeEEeecCCC--CceeeEEe
Q 036953 726 -VSDMELVRVLPSAE--DEVNVACF 747 (792)
Q Consensus 726 -~~~~~~~~~~~~~~--~~~n~~~~ 747 (792)
-.|+.|++.-.... +.|..+|.
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~picL 117 (237)
T 1gvz_A 93 ISHDLMLLRLAQPARITDAVKILDL 117 (237)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCCC
T ss_pred cCCceEEEEeCCCcccCCcEeeeEC
Confidence 46888888655443 34555665
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=40.60 E-value=3e+02 Score=27.70 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=37.7
Q ss_pred CCCEEEEEEC------CCeEEEEECCCCcEEEEec-CCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcEE
Q 036953 106 DGRTLASTHG------DHTVKIIDCQTGNCLKVLS-GHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSECI 173 (792)
Q Consensus 106 DG~~LaSGS~------DGtVrIWDl~tgk~v~~L~-gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~v 173 (792)
+++.++.|+. -..+.+||+.+.+-...-. .....-.+++.. ++++++.|+.+ ..+.+||+.+.+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 6666677653 2358899988765322211 111111222322 56788888754 35778999887644
Q ss_pred E
Q 036953 174 G 174 (792)
Q Consensus 174 ~ 174 (792)
.
T Consensus 236 ~ 236 (318)
T 2woz_A 236 V 236 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 346
>1vqy_A Hypothetical protein AGR_PAT_315; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.40A {Agrobacterium tumefaciens str} SCOP: d.58.4.13
Probab=39.46 E-value=13 Score=33.60 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=18.1
Q ss_pred CceeEEEEEEEeecccccchhh
Q 036953 648 AHQVMYELRIYSLEESTFGSVL 669 (792)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~ 669 (792)
-|.+|||||.|.|...+..+.+
T Consensus 10 ~~~~~yElRtY~i~Pg~~~~f~ 31 (116)
T 1vqy_A 10 HHHMIVEERIYRIRGGKMQEYL 31 (116)
T ss_dssp --CCEEEEEEEEECTTCHHHHH
T ss_pred cceeEEEEEEEEEcCCCHHHHH
Confidence 4689999999999999887776
No 347
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=37.17 E-value=25 Score=35.25 Aligned_cols=71 Identities=23% Similarity=0.509 Sum_probs=38.2
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+. .+..-.+. +|...... +.+.....+.|.+++. -.|+.|++.-
T Consensus 45 GtLIs~~~VLTAAHC~~----~~~~~~V~--~G~~~~~~------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 112 (251)
T 1pyt_D 45 GTLITPNHVLTAAHCIS----NTLTYRVA--LGKNNLEV------EDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLA 112 (251)
T ss_dssp EEEEETTEEEECGGGCC----TTCCEEEE--ESCSBTTC------SCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred eEEecCCEEEECHHHhC----CCceEEEE--Eccccccc------CCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 4455554 789999986 23333333 44433211 1123344566666653 3688888764
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|..+|.-
T Consensus 113 ~~v~~~~~v~picLp 127 (251)
T 1pyt_D 113 ETVELGDTIQVACLP 127 (251)
T ss_dssp SCCCCCSSCCCCBCC
T ss_pred CCcccCCCeeeeEcC
Confidence 4433 356666663
No 348
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=36.31 E-value=26 Score=34.55 Aligned_cols=68 Identities=25% Similarity=0.388 Sum_probs=38.6
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. .+.+-+|.... .+.+....++.|.+++. -.|+.|++.-
T Consensus 31 GsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (227)
T 1euf_A 31 GFLVREDFVLTAAHCLGS--------SINVTLGAHNI-------MERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLT 95 (227)
T ss_dssp EEEEETTEEEECGGGCCE--------EEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEECHHHCCC--------CcEEEEccccc-------CCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEEC
Confidence 4455555 7899999964 13344444332 12233456677777654 3588888865
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|.-
T Consensus 96 ~~~~~~~~v~picLp 110 (227)
T 1euf_A 96 RKADITDKVSPINLP 110 (227)
T ss_dssp SCCCCCSSCCCCCCC
T ss_pred CcCcCCCceeccCCC
Confidence 4332 345556653
No 349
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=34.52 E-value=28 Score=34.37 Aligned_cols=72 Identities=18% Similarity=0.384 Sum_probs=39.9
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEE-----------EeCCceeEE
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVY-----------RVSDMELVR 733 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 733 (792)
|.++..+ .++||||+... +..+.+.+-+|..... ..+.....+.|.+++ .-.|+.|++
T Consensus 33 GtLI~~~~VLTAAHC~~~~---~~~~~~~v~~g~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~ 102 (247)
T 3mhw_U 33 GSLISPCWVISATHCFIDY---PKKEDYIVYLGRSRLN-------SNTQGEMKFEVENLILHKDYSADTLAHHNDIALLK 102 (247)
T ss_dssp EEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSS-------SCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEE
T ss_pred EEEEeCCEEEEcHHhCcCC---CCCccEEEEecccccc-------CCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEE
Confidence 5566655 78999998642 2233344555544321 112233456666653 236888888
Q ss_pred eecC------CCCceeeEEe
Q 036953 734 VLPS------AEDEVNVACF 747 (792)
Q Consensus 734 ~~~~------~~~~~n~~~~ 747 (792)
.-.. ..+.|.-+|.
T Consensus 103 L~~~~~~~~~~~~~v~pi~l 122 (247)
T 3mhw_U 103 IRSKEGRCAQPSRTIQTISL 122 (247)
T ss_dssp EECTTSCCCCCBTTBCCCBC
T ss_pred eCCccccccccCCccccccc
Confidence 6432 2345666665
No 350
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=34.26 E-value=3.7e+02 Score=26.93 Aligned_cols=104 Identities=10% Similarity=0.018 Sum_probs=56.3
Q ss_pred EcCCCCEEEEEEC-----C------CeEEEEECCCCcEEEEecC---CCCCcEEEEEccCCCCEEEEEeCC--------C
Q 036953 103 FSPDGRTLASTHG-----D------HTVKIIDCQTGNCLKVLSG---HRRTPWVVRFHPLRSEILASGSLD--------H 160 (792)
Q Consensus 103 fSPDG~~LaSGS~-----D------GtVrIWDl~tgk~v~~L~g---H~~~VtsVafSP~dg~lLaSgS~D--------g 160 (792)
...+++.++.|+. . ..+.+||..+++-. .+.. .......+.+ ++.+++.|+.+ .
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~ 117 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLD 117 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCC
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccc
Confidence 3447788888873 1 12778888776532 2221 1111122222 56777777743 4
Q ss_pred eEEEEECCCCcEEEEec--cCCCeeEEEEcCCCcEEEEEcC-------CeEEEEECCCCC
Q 036953 161 EVRLWDANTSECIGSCD--FYRPIASIAFHAEGELLAVASG-------HKLYIWPYNNKE 211 (792)
Q Consensus 161 tVrLWDl~tg~~v~t~~--h~s~V~sVafSpdG~~LasgSd-------d~V~IWDlrt~~ 211 (792)
.+.+||+.+.+....-. ....-.+++. -++++++.|+. +.+.+||..+.+
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred eEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 58899998875433221 1111112222 35667676653 238999987765
No 351
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=34.04 E-value=25 Score=34.56 Aligned_cols=72 Identities=17% Similarity=0.316 Sum_probs=36.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE--------eCCceeEEeec
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR--------VSDMELVRVLP 736 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 736 (792)
|.++..+ .++||||+... .|. .+.+-+|.....- ..+.....+.|.+++. ..|+.|++.-.
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~~--~~~V~~G~~~~~~------~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 97 (225)
T 1a7s_A 28 GALIHARFVMTAASCFQSQ--NPG--VSTVVLGAYDLRR------RERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDR 97 (225)
T ss_dssp EEEEETTEEEECGGGC------CC--SEEEEESCSSTTS------CCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESS
T ss_pred EEEeeCCEEEEchhccCCC--CCC--ceEEEEeeeECCC------CCCcceeEEeEEEEecccccCCCCcCCEEEEEcCC
Confidence 4445555 78999999762 232 3333444433200 1112225677777654 26888887654
Q ss_pred CCC--CceeeEEe
Q 036953 737 SAE--DEVNVACF 747 (792)
Q Consensus 737 ~~~--~~~n~~~~ 747 (792)
... +.|..+|.
T Consensus 98 ~~~~~~~v~pi~L 110 (225)
T 1a7s_A 98 EANLTSSVTILPL 110 (225)
T ss_dssp CCCCBTTBCCCCC
T ss_pred cccCCCceeEEEc
Confidence 433 34555665
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=33.51 E-value=2.7e+02 Score=30.91 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=57.5
Q ss_pred CCcEEEEEccCCCC-EEEEEeCCCeEEEEECCCC---cEEEEec----------cCCCeeEEEEcCC----CcEEEEEc-
Q 036953 138 RTPWVVRFHPLRSE-ILASGSLDHEVRLWDANTS---ECIGSCD----------FYRPIASIAFHAE----GELLAVAS- 198 (792)
Q Consensus 138 ~~VtsVafSP~dg~-lLaSgS~DgtVrLWDl~tg---~~v~t~~----------h~s~V~sVafSpd----G~~LasgS- 198 (792)
...+.|+|.| ++. .|+.+...|.|++++.... +.+..+. .......|+|+|+ +.+.++-+
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3567899999 764 4455578899999975432 1222221 1356789999997 43333322
Q ss_pred --C----------CeEEEEECCCC--C-----cccCCeEEe--cCCCCeEEEEEccCCCeEEEEE
Q 036953 199 --G----------HKLYIWPYNNK--E-----EASSPIIVL--KTRRSLRAVHFHPHAAPFVLTA 242 (792)
Q Consensus 199 --d----------d~V~IWDlrt~--~-----~~~~~~~~~--~h~~sVtsVafSPdG~~LlaS~ 242 (792)
+ ..|.-|.+... . ......... .....-..|.|.|||..+++++
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 1 13555666432 1 011011111 1223467899999997444444
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=31.68 E-value=1.6e+02 Score=38.12 Aligned_cols=119 Identities=10% Similarity=0.136 Sum_probs=78.0
Q ss_pred CeEEEEECCCCcEEEEecCCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccCCCeeEEEEcCCCcEEEE
Q 036953 117 HTVKIIDCQTGNCLKVLSGHRRTPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDFYRPIASIAFHAEGELLAV 196 (792)
Q Consensus 117 GtVrIWDl~tgk~v~~L~gH~~~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~s~V~sVafSpdG~~Las 196 (792)
.+|.|.|+..++.+..- .-..-+.-.+| ..++++.= ...++.++|+.+++.++.+.....|.--.|-.+ +.|+.
T Consensus 48 ~~vvIidl~~~~~~~rr---pi~AdsAIMnP-~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~l 121 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR---PISADSAIMNP-ASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 121 (1630)
T ss_pred ceEEEEECCCCCCcccc---cccchhhccCC-CcceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeEE
Confidence 37888898876543211 11122345678 55666654 478899999999998888887778877777544 45555
Q ss_pred EcCCeEEEEECCCCCcccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 036953 197 ASGHKLYIWPYNNKEEASSPIIVLKT----RRSLRAVHFHPHAAPFVLTAE 243 (792)
Q Consensus 197 gSdd~V~IWDlrt~~~~~~~~~~~~h----~~sVtsVafSPdG~~LlaS~s 243 (792)
-++..|+-|++.....+. ..+..| ...|..-.-+++.++++..|=
T Consensus 122 VT~~aVyHW~~~~~s~P~--k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 122 VTDNAVYHWSMEGESQPV--KMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (1630)
T ss_pred EcCCeEEEeccCCCCccH--HHHhcchhcccCeeEEeeeCCCCCeEEEEee
Confidence 556679999996533221 111111 456778888999998877663
No 354
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=31.38 E-value=1.8e+02 Score=31.14 Aligned_cols=65 Identities=15% Similarity=0.080 Sum_probs=44.5
Q ss_pred ECCCeEEEEECCCCcEEEEecC----CCCCcEE---EEE-----ccCCCCEEEEEeCCCeEEEEECCCCcEEEEeccC
Q 036953 114 HGDHTVKIIDCQTGNCLKVLSG----HRRTPWV---VRF-----HPLRSEILASGSLDHEVRLWDANTSECIGSCDFY 179 (792)
Q Consensus 114 S~DGtVrIWDl~tgk~v~~L~g----H~~~Vts---Vaf-----SP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h~ 179 (792)
..||.|..+|..+|.....+.- ...++.. ..+ .. .+..+++++.++.+...|+++|+.++.+...
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~-~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIV-EDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC-----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccc-cCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 5799999999988865554431 1122221 000 00 3568899999999999999999999998643
No 355
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=31.29 E-value=4e+02 Score=26.38 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCCEEEEEECCC-----eEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC-------CeEEEEECCCCc
Q 036953 106 DGRTLASTHGDH-----TVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD-------HEVRLWDANTSE 171 (792)
Q Consensus 106 DG~~LaSGS~DG-----tVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D-------gtVrLWDl~tg~ 171 (792)
+++.++.|+.++ .+.+||+.+.+-... +....... +++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 577777777553 577889877653222 11111112 22222 56777777643 458899998876
Q ss_pred EEEEec--cCCCeeEEEEcCCCcEEEEEc-C-----CeEEEEECCCCC
Q 036953 172 CIGSCD--FYRPIASIAFHAEGELLAVAS-G-----HKLYIWPYNNKE 211 (792)
Q Consensus 172 ~v~t~~--h~s~V~sVafSpdG~~LasgS-d-----d~V~IWDlrt~~ 211 (792)
....-. ....-.++.. -++++++.|+ + +.+.+||..+.+
T Consensus 185 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 443321 1111112222 2567777765 2 238889987654
No 356
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=31.20 E-value=33 Score=33.73 Aligned_cols=68 Identities=24% Similarity=0.318 Sum_probs=38.8
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. .+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 31 GsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (224)
T 1cgh_A 31 GFLVREDFVLTAAHCWGS--------NINVTLGAHNIQ-------RRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLS 95 (224)
T ss_dssp EEEEETTEEEECGGGCCS--------SEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred EEEeeCCEEEEhHHhCCC--------CCEEEEeecccC-------CCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEEC
Confidence 4455555 7899999853 233444443321 1233445677777654 2588888865
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|.-
T Consensus 96 ~~v~~~~~v~picLp 110 (224)
T 1cgh_A 96 RRVRRNRNVNPVALP 110 (224)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CCCcCCCceEeeECC
Confidence 4433 356667763
No 357
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=30.95 E-value=39 Score=33.67 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=38.7
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 735 (792)
|.++..+ .++||||+..- .....+.+-+|.... ...+....+++|.+++.- .|+.|++.-
T Consensus 28 GtLI~~~~VLTAAhC~~~~---~~~~~~~v~~g~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 97 (261)
T 3gyl_B 28 GSLVSEQWVLSAAHCFPSE---HHKEAYEVKLGAHQL-------DSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLS 97 (261)
T ss_dssp EEECSSSEEEECGGGSCTT---SCGGGEEEEESCSBT-------TSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEES
T ss_pred EEEEcCCEEEECHHHCCCC---CCcccEEEEeCceec-------cCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEEC
Confidence 5555555 78999998531 112333444454332 112233456677766543 488888865
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 98 ~~v~~~~~v~picL 111 (261)
T 3gyl_B 98 RPITFSRYIRPISL 111 (261)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CCccCCCceeccCC
Confidence 4332 34555665
No 358
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=30.59 E-value=20 Score=35.75 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=40.5
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---eCCceeEEeecCCC--
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---VSDMELVRVLPSAE-- 739 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 739 (792)
|.++..+ .++||||+.... +. .+.+-+|.....- ...+....++.|.+++. -.|+.|++.-....
T Consensus 27 GtLIs~~~VLTAAHC~~~~~--~~--~~~v~~G~~~~~~-----~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~ 97 (240)
T 1si5_H 27 GSLIKESWVLTARQCFPSRD--LK--DYEAWLGIHDVHG-----RGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLD 97 (240)
T ss_dssp EEEEETTEEEEEGGGCSSSC--GG--GEEEEESCSBSSC-----STTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCS
T ss_pred EEEeeCCEEEEhHHhcCCCC--Cc--cEEEEEeeeecCC-----CCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccC
Confidence 4444444 789999996532 22 3334445433210 01123445677777653 36888888655443
Q ss_pred CceeeEEec
Q 036953 740 DEVNVACFH 748 (792)
Q Consensus 740 ~~~n~~~~~ 748 (792)
+.|.-+|.-
T Consensus 98 ~~v~picLp 106 (240)
T 1si5_H 98 DFVSTIDLP 106 (240)
T ss_dssp SSCCCCBCC
T ss_pred CceeccCcC
Confidence 356667764
No 359
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=30.29 E-value=38 Score=32.95 Aligned_cols=68 Identities=24% Similarity=0.293 Sum_probs=38.1
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 735 (792)
|.++..+ .++||||+. +.+.+-+|.... ...+.....+.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAhC~~--------~~~~v~~g~~~~-------~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (224)
T 3rp2_A 32 GFLISRQFVLTAAHCKG--------REITVILGAHDV-------RKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLE 96 (224)
T ss_dssp EEESSSSEEEECGGGCC--------SEEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEES
T ss_pred eEEeeCCEEEEchhcCC--------CCcEEEEecccc-------CcCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcC
Confidence 4555555 789999973 234444454332 112334456666666542 488888864
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|+.+|..
T Consensus 97 ~~~~~~~~v~pi~l~ 111 (224)
T 3rp2_A 97 KKVELTPAVNVVPLP 111 (224)
T ss_dssp SCCCCBTTBCCCCCC
T ss_pred CCcccCCcccceecC
Confidence 4332 456667763
No 360
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=30.18 E-value=16 Score=36.12 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=39.4
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 735 (792)
|.++..+ .++||||+..-...|..-.+.++ ....+- ..+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g--~~~~~~------~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~ 99 (235)
T 4dgj_A 28 ASLVSSDWLVSAAHCVYGRNLEPSKWTAILG--LHMKSN------LTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLE 99 (235)
T ss_dssp EEECSSSEEEECHHHHTTSCSSGGGEEEEES--CCBTTC------CSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEeeCCEEEECHHhcCCCCCCCccEEEEEe--eecccc------cCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEEC
Confidence 4555555 78999999654444544444444 322211 11223334556666532 588888764
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 100 ~~~~~~~~v~picL 113 (235)
T 4dgj_A 100 FKVNYTDYIQPISL 113 (235)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CccccCCcccccCC
Confidence 3332 34666665
No 361
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=29.65 E-value=31 Score=34.12 Aligned_cols=68 Identities=29% Similarity=0.492 Sum_probs=36.9
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-------------------
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR------------------- 725 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 725 (792)
|.++..+ .++||||+.. ...+. +|.... ...+.....++|.+++.
T Consensus 28 GsLIs~~~VLTAAHC~~~------~~~v~--~G~~~~-------~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~ 92 (237)
T 2zch_P 28 GVLVHPQWVLTAAHCIRN------KSVIL--LGRHSL-------FHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDD 92 (237)
T ss_dssp EEEEETTEEEECGGGCCS------SCEEE--ESCSBS-------SSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCB
T ss_pred EEEecCCEEEEcHHhcCC------CceEE--Eecccc-------cCCCCCcEEEEEEEEecCCCcchhhhcccccccCCC
Confidence 4555555 7899999853 11233 333221 11223345677777753
Q ss_pred -eCCceeEEeecCCC--CceeeEEec
Q 036953 726 -VSDMELVRVLPSAE--DEVNVACFH 748 (792)
Q Consensus 726 -~~~~~~~~~~~~~~--~~~n~~~~~ 748 (792)
-.|+.|++.-...+ +.|..+|.-
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~pi~Lp 118 (237)
T 2zch_P 93 SSHDLMLLRLSEPAELTDAVKVMDLP 118 (237)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCC
T ss_pred CCcceEEEEeCCCCccCCcEeeeECC
Confidence 35888887654433 345556653
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=29.63 E-value=38 Score=42.09 Aligned_cols=38 Identities=24% Similarity=0.386 Sum_probs=31.3
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCD 177 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~ 177 (792)
.+.+++..+ +..++++-+.|+++|+||+.+++++.+..
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344455556 77899999999999999999999998864
No 363
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=29.62 E-value=35 Score=33.50 Aligned_cols=69 Identities=17% Similarity=0.289 Sum_probs=39.2
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-------eCCceeEEeecC
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR-------VSDMELVRVLPS 737 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 737 (792)
|.++..+ .++||||+... .+ ..+.+-+|.... +.....++|.+++. -.|+.|++.-..
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~----------~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~ 93 (224)
T 1pq7_A 28 GSLLNANTVLTAAHCVSGY--AQ--SGFQIRAGSLSR----------TSGGITSSLSSVRVHPSYSGNNNDLAILKLSTS 93 (224)
T ss_dssp EEEEETTEEEECHHHHTTS--CG--GGEEEEESCSBS----------SSSSEEECEEEEEECTTCBTTBTCCEEEEESSC
T ss_pred EEEecCCEEEEcHHccCCC--CC--CceEEEeCccee----------cCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCC
Confidence 4444444 78999999642 12 233444444332 22335566666654 358888886544
Q ss_pred CC--CceeeEEec
Q 036953 738 AE--DEVNVACFH 748 (792)
Q Consensus 738 ~~--~~~n~~~~~ 748 (792)
.. +.|..+|.-
T Consensus 94 ~~~~~~v~picL~ 106 (224)
T 1pq7_A 94 IPSGGNIGYARLA 106 (224)
T ss_dssp CCCBTTBCCCCBC
T ss_pred CcCCCcccceecC
Confidence 43 356667764
No 364
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=29.48 E-value=22 Score=35.14 Aligned_cols=71 Identities=28% Similarity=0.428 Sum_probs=40.0
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-----------eCCceeEE
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR-----------VSDMELVR 733 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 733 (792)
|.++..+ .++||||+.. + ..+.+-+|..... ..+.....++|.+++. -.|+.|++
T Consensus 32 GtLIs~~~VLTAAHC~~~----~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~ 98 (236)
T 1elt_A 32 GSLIRQGWVMTAAHCVDS----A--RTWRVVLGEHNLN-------TNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLR 98 (236)
T ss_dssp EEEEETTEEEECHHHHSS----C--CCEEEEESCSBTT-------SCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred EEEEeCCEEEECHHhhCC----c--CceEEEEccccCC-------CCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEE
Confidence 4455544 8899999964 2 2334444543321 1122345677777754 45888888
Q ss_pred eecCCC--CceeeEEecc
Q 036953 734 VLPSAE--DEVNVACFHP 749 (792)
Q Consensus 734 ~~~~~~--~~~n~~~~~~ 749 (792)
.-.... +.|..+|.-+
T Consensus 99 L~~~~~~~~~v~picL~~ 116 (236)
T 1elt_A 99 LNTQASLNSAVQLAALPP 116 (236)
T ss_dssp ESSCCCCSSSCCCCCCCC
T ss_pred CCCCCccCCcEEeccCCC
Confidence 654332 4566677643
No 365
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=29.36 E-value=2.9e+02 Score=27.73 Aligned_cols=102 Identities=13% Similarity=0.134 Sum_probs=55.4
Q ss_pred CCCEEEEEECC-------CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeC------CCeEEEEECCCC
Q 036953 106 DGRTLASTHGD-------HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSL------DHEVRLWDANTS 170 (792)
Q Consensus 106 DG~~LaSGS~D-------GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~------DgtVrLWDl~tg 170 (792)
+++.++.|+.+ ..+.+||..+.+-... +........ ++. . ++++++.|+. -..+.+||+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN-VIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCE-EEE-E-TTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccE-EEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 56777777753 3578888877653221 111111111 222 2 5677777764 245899999887
Q ss_pred cEEEEec--cCCCeeEEEEcCCCcEEEEEc--C----CeEEEEECCCCC
Q 036953 171 ECIGSCD--FYRPIASIAFHAEGELLAVAS--G----HKLYIWPYNNKE 211 (792)
Q Consensus 171 ~~v~t~~--h~s~V~sVafSpdG~~LasgS--d----d~V~IWDlrt~~ 211 (792)
+....-. ....-.+++. -++++++.|+ + +.+.+||+.+.+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 6443321 1111112222 2567777765 2 237899987765
No 366
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=29.13 E-value=35 Score=33.52 Aligned_cols=68 Identities=22% Similarity=0.290 Sum_probs=39.4
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. .+.+-+|..... +.+.....+.|.+++. -.|+.|++.-
T Consensus 31 GtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (227)
T 1iau_A 31 GFLIRDDFVLTAAHCWGS--------SINVTLGAHNIK-------EQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLE 95 (227)
T ss_dssp EEEEETTEEEECGGGCCS--------EEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEcCCEEEECHHhCCC--------ceEEEEcccccc-------CCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEEC
Confidence 5566555 8899999853 234444543321 1233456677777654 3588888865
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|.-
T Consensus 96 ~~~~~~~~v~picLp 110 (227)
T 1iau_A 96 RKAKRTRAVQPLRLP 110 (227)
T ss_dssp SCCCCBTTBCCCCCC
T ss_pred CcccCCCceecccCC
Confidence 4432 346666663
No 367
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=28.86 E-value=29 Score=34.36 Aligned_cols=69 Identities=20% Similarity=0.368 Sum_probs=38.4
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. ..-.+. +|.... ...+....++.|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~-----~~~~v~--~G~~~~-------~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~ 93 (234)
T 1orf_A 28 GALIAKDWVLTAAHCNLN-----KRSQVI--LGAHSI-------TREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLT 93 (234)
T ss_dssp EEEEETTEEEECTTCCCC-----TTCEEE--ESCSBS-------SSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEEchhcCCC-----CCceEE--Eecccc-------CcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEEC
Confidence 5555555 7899999863 222333 343221 01123345677777764 3588888865
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|..+|.-
T Consensus 94 ~~~~~~~~v~picLp 108 (234)
T 1orf_A 94 EKAKINKYVTILHLP 108 (234)
T ss_dssp SCCCCSSSSCCCCCC
T ss_pred CcCccCCCeeeeecC
Confidence 4433 346666653
No 368
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=28.74 E-value=39 Score=33.18 Aligned_cols=68 Identities=21% Similarity=0.327 Sum_probs=37.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+. . .+.+-+|..... ..+.....++|.+++. -.|+.|++.-
T Consensus 27 GsLIs~~~VLTAAHC~~------~--~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (222)
T 1hj8_A 27 GSLVNENWVVSAAHCYK------S--RVEVRLGEHNIK-------VTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLS 91 (222)
T ss_dssp EEEEETTEEEECGGGCC------S--SCEEEESCSBTT-------SCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred eEEecCCEEEECHHhcC------C--CeEEEEcccccc-------cCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 4445444 789999985 1 222333433221 1122345677777754 3588888865
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
...+ +.|.-+|..
T Consensus 92 ~~~~~~~~v~picL~ 106 (222)
T 1hj8_A 92 KPATLNTYVQPVALP 106 (222)
T ss_dssp SCCCCSSSCCCCBCC
T ss_pred CcccCCCceeccCCC
Confidence 4433 346666663
No 369
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=28.70 E-value=45 Score=34.21 Aligned_cols=75 Identities=21% Similarity=0.426 Sum_probs=39.9
Q ss_pred chhhhhH-HhhhccceeE----EEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE----------eCCce
Q 036953 666 GSVLVSR-AIRAAHCLTS----IQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR----------VSDME 730 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 730 (792)
|.++..+ .++||||+.. ..+.+.. +.+-+|.-...- .......++.|.+++. -.|+.
T Consensus 60 GsLIs~~~VLTAAHC~~~~~~~~~~~~~~--~~V~~G~~~~~~------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIA 131 (289)
T 2bdy_A 60 ASLISDRWVLTAAHCLLYPPWDKNFTEND--LLVRIGKHSRTR------YERNIEKISMLEKIYIHPRYNWRENLDRDIA 131 (289)
T ss_dssp EEECSSSEEEECGGGTEEGGGTEECCGGG--EEEEESCCBSSS------CCTTTCEEEEEEEEEECTTCBTTTTCBTCCE
T ss_pred EEEecCCEEEEcHHhcccCccccccCccc--EEEEEccccccc------cCCCcceeeeeEEEEECCCCCCCCCCCCeEE
Confidence 4445444 7899999964 2344443 344444432210 1112234556666642 25888
Q ss_pred eEEeecCCC--CceeeEEec
Q 036953 731 LVRVLPSAE--DEVNVACFH 748 (792)
Q Consensus 731 ~~~~~~~~~--~~~n~~~~~ 748 (792)
|++.-.... +.|.-+|.-
T Consensus 132 Ll~L~~pv~~~~~v~picLp 151 (289)
T 2bdy_A 132 LMKLKKPVAFSDYIHPVCLP 151 (289)
T ss_dssp EEEESSCCCCBTTBCCCBCC
T ss_pred EEEECCccccCCcccccCCC
Confidence 888654443 456777763
No 370
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=28.52 E-value=47 Score=32.47 Aligned_cols=71 Identities=21% Similarity=0.344 Sum_probs=38.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+... .|. .+.+-+|.... ...+.....++|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~--~~~--~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~ 96 (228)
T 2xw9_A 28 GVLVAEQWVLSAAHCLEDA--ADG--KVQVLLGAHSL-------SQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLS 96 (228)
T ss_dssp EEEEETTEEEECGGGGSSC--TTC--CEEEEESCSBS-------SSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEES
T ss_pred EEEEeCCEEEEcHHhCCCC--CCC--ceEEEEccccc-------CCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeC
Confidence 4555555 78999999632 222 33444454332 11122345677777754 2578888765
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 97 ~~~~~~~~v~pi~l 110 (228)
T 2xw9_A 97 EKATLGPAVRPLPW 110 (228)
T ss_dssp SCCCCBTTBCCCCB
T ss_pred CCcccCCCeeeccc
Confidence 4433 34555554
No 371
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=28.21 E-value=56 Score=31.75 Aligned_cols=72 Identities=22% Similarity=0.415 Sum_probs=38.4
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE--------eCCceeEEeec
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR--------VSDMELVRVLP 736 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 736 (792)
|.++..+ .++||||+.... + ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-.
T Consensus 31 GtLIs~~~VLTAAHC~~~~~--~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~ 99 (221)
T 1fuj_A 31 GTLIHPSFVLTAAHCLRDIP--Q--RLVNVVLGAHNVR-------TQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSS 99 (221)
T ss_dssp EEEEETTEEEECGGGGSSSC--G--GGEEEEESCSBTT-------SCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESS
T ss_pred EEEecCCEEEEchHhcCcCC--C--CceEEEEeeeecc-------CCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCC
Confidence 4455555 889999996521 2 2333444433220 1223345666766654 35888887644
Q ss_pred CCC--CceeeEEec
Q 036953 737 SAE--DEVNVACFH 748 (792)
Q Consensus 737 ~~~--~~~n~~~~~ 748 (792)
... +.|.-+|.-
T Consensus 100 ~~~~~~~v~picL~ 113 (221)
T 1fuj_A 100 PANLSASVATVQLP 113 (221)
T ss_dssp CCCCCSSCCCCBCC
T ss_pred ccccCCcceeeECC
Confidence 332 345555653
No 372
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=27.86 E-value=34 Score=33.70 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=40.7
Q ss_pred chhhhhH-HhhhccceeEE---EeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeE
Q 036953 666 GSVLVSR-AIRAAHCLTSI---QFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELV 732 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 732 (792)
|.++..+ .++||||+..- .+.+ ...+.+-+|....+- ..+.....++|.+++.- .|+.|+
T Consensus 29 GtLI~~~~VLTAAhC~~~~~~~~~~~-~~~~~v~~G~~~~~~------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl 101 (241)
T 3ncl_A 29 ASLISPNWLVSAAHCYIDDRGFRYSD-PTQWTAFLGLHDQSQ------RSAPGVQERRLKRIISHPFFNDFTFDYDIALL 101 (241)
T ss_dssp EEECSSSEEEECGGGGCCBTTBCTTC-GGGEEEEESCSBTTC------TTSTTCEEEEEEEEEECTTCCTTTCTTCCEEE
T ss_pred EEEeeCCEEEEcHHhcccCCCccccC-CceEEEEEecccccc------CCCCCceEEEEEEEEECCCCCCCCCCCcEEEE
Confidence 4555555 78999998642 1111 122333344433211 11334567777777653 488888
Q ss_pred EeecCCC--CceeeEEe
Q 036953 733 RVLPSAE--DEVNVACF 747 (792)
Q Consensus 733 ~~~~~~~--~~~n~~~~ 747 (792)
+.-.... +.|.-+|.
T Consensus 102 ~L~~~~~~~~~v~picl 118 (241)
T 3ncl_A 102 ELEKPAEYSSMVRPISL 118 (241)
T ss_dssp EESSCCCCCSSCCCCBC
T ss_pred EECCCCcccCccCceEc
Confidence 8644332 45666776
No 373
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=27.38 E-value=41 Score=33.30 Aligned_cols=74 Identities=22% Similarity=0.437 Sum_probs=39.4
Q ss_pred chhhhhH-HhhhccceeE----EEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE----------eCCce
Q 036953 666 GSVLVSR-AIRAAHCLTS----IQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR----------VSDME 730 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 730 (792)
|.++..+ .++||||+.. ..+.+. .+.+-+|.....- .......++.|.+++. -.|+.
T Consensus 30 GtLI~~~~VLTAAHC~~~~~~~~~~~~~--~~~v~~G~~~~~~------~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIA 101 (259)
T 3rm2_H 30 ASLISDRWVLTAAHCLLYPPWDKNFTEN--DLLVRIGKHSRTR------YERNIEKISMLEKIYIHPRYNWRENLDRDIA 101 (259)
T ss_dssp EEECSSSEEEECGGGTEEGGGTEECCGG--GEEEEESCCBSSS------CCTTTCEEEEEEEEEECTTCBTTTTCBTCCE
T ss_pred EEEEeCCEEEEcHHhCcccccccccCcc--cEEEEECcccccc------cccCcceeeEEEEEEECCCCCCCCCCCCcEE
Confidence 5555555 7899999963 344444 3444445433211 1122233444555532 23888
Q ss_pred eEEeecCCC--CceeeEEe
Q 036953 731 LVRVLPSAE--DEVNVACF 747 (792)
Q Consensus 731 ~~~~~~~~~--~~~n~~~~ 747 (792)
|++.-.... +.|.-+|.
T Consensus 102 Ll~L~~~v~~~~~v~picL 120 (259)
T 3rm2_H 102 LMKLKKPVAFSDYIHPVCL 120 (259)
T ss_dssp EEEESSCCCCBTTBCCCBC
T ss_pred EEEeCCceEcCCCcccccC
Confidence 887654433 45666676
No 374
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=27.27 E-value=71 Score=37.96 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=29.9
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecc
Q 036953 139 TPWVVRFHPLRSEILASGSLDHEVRLWDANTSECIGSCDF 178 (792)
Q Consensus 139 ~VtsVafSP~dg~lLaSgS~DgtVrLWDl~tg~~v~t~~h 178 (792)
.|.++.+ +..++++-+.|+++|+||+++++++....-
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3554444 468999999999999999999999888753
No 375
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=26.94 E-value=33 Score=33.88 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=11.4
Q ss_pred chhhhhH-Hhhhcccee
Q 036953 666 GSVLVSR-AIRAAHCLT 681 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~ 681 (792)
|.++..+ .++||||+.
T Consensus 28 GtLI~~~~VLTAAHC~~ 44 (237)
T 1ao5_A 28 GVLLDRNWVLTAAHCYV 44 (237)
T ss_dssp EEEEETTEEEECTTCCC
T ss_pred EEEeeCCEEEECHHHCC
Confidence 4445554 789999985
No 376
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=26.66 E-value=39 Score=33.43 Aligned_cols=74 Identities=16% Similarity=0.293 Sum_probs=40.8
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+... .....+.+-+|.... .+.+.....++|.+++. ..|+.|++.-
T Consensus 30 GtLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 99 (240)
T 1mza_A 30 GVLIDPQWVLTAAHCQYRF---TKGQSPTVVLGAHSL-------SKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQ 99 (240)
T ss_dssp EEEEETTEEEECGGGSCTT---CSCSCEEEEESCSBS-------SSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEES
T ss_pred EEEecCCEEEECHHhCCCC---CCCCCeEEEeCceec-------CCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeC
Confidence 5555555 78999998531 112233444454332 11223345677777754 2588888865
Q ss_pred cCCC--CceeeEEecc
Q 036953 736 PSAE--DEVNVACFHP 749 (792)
Q Consensus 736 ~~~~--~~~n~~~~~~ 749 (792)
.... +.|..+|.-+
T Consensus 100 ~~~~~~~~v~pi~l~~ 115 (240)
T 1mza_A 100 TAAKLNKHVKMLHIRS 115 (240)
T ss_dssp SCCCCBTTBCCCCBCS
T ss_pred CCcccCCceeeeecCC
Confidence 4433 3566667643
No 377
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=26.40 E-value=3.5e+02 Score=31.40 Aligned_cols=107 Identities=15% Similarity=0.171 Sum_probs=59.5
Q ss_pred CCCCEEEEEECCC--eEEEEECCCCcEEEEe-----cCCCCCcEEEEEccCCCCEEEEEeC--C-----CeEEEEECCCC
Q 036953 105 PDGRTLASTHGDH--TVKIIDCQTGNCLKVL-----SGHRRTPWVVRFHPLRSEILASGSL--D-----HEVRLWDANTS 170 (792)
Q Consensus 105 PDG~~LaSGS~DG--tVrIWDl~tgk~v~~L-----~gH~~~VtsVafSP~dg~lLaSgS~--D-----gtVrLWDl~tg 170 (792)
.+++.++.|+.++ .+.+||..+.+-...- .........+.+...++++++.|+. + +.+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3788888887654 6899998876522211 1112222335556523678888876 2 45889999887
Q ss_pred c------EEEEec---cCCCeeEEEEcCCCcEEEEEcC---------CeEEEEECCCCC
Q 036953 171 E------CIGSCD---FYRPIASIAFHAEGELLAVASG---------HKLYIWPYNNKE 211 (792)
Q Consensus 171 ~------~v~t~~---h~s~V~sVafSpdG~~LasgSd---------d~V~IWDlrt~~ 211 (792)
+ ...... ....-.++....++++++.|+. +.|.+||..+.+
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 6 221111 1111112233333677776651 227888877654
No 378
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=26.38 E-value=39 Score=33.50 Aligned_cols=70 Identities=19% Similarity=0.300 Sum_probs=37.9
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-----------eCCceeEE
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR-----------VSDMELVR 733 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 733 (792)
|.++..+ .++||||+.. + ..+.+-+|.-... ..+...+.+.|.+++. -.|+.|++
T Consensus 32 GsLI~~~~VLTAAHC~~~----~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~ 98 (240)
T 1gvk_B 32 GTLIRQNWVMTAAHCVDR----E--LTFRVVVGEHNLN-------QNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLR 98 (240)
T ss_dssp EEEEETTEEEECGGGGCS----C--CCEEEEESCSBTT-------SCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred EEEeeCCEEEECHHHCCC----C--cceEEEECCeecc-------cCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEE
Confidence 4445444 7899999864 2 2233444443321 1122345667777653 35888888
Q ss_pred eecCCC--CceeeEEec
Q 036953 734 VLPSAE--DEVNVACFH 748 (792)
Q Consensus 734 ~~~~~~--~~~n~~~~~ 748 (792)
.-.... +.|.-+|.-
T Consensus 99 L~~~v~~~~~v~pi~lp 115 (240)
T 1gvk_B 99 LAQSVTLNSYVQLGVLP 115 (240)
T ss_dssp ESSCCCCBTTBCCCCCC
T ss_pred ECCccccCCCccceecC
Confidence 654433 345556653
No 379
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=26.09 E-value=5.5e+02 Score=26.72 Aligned_cols=109 Identities=9% Similarity=-0.024 Sum_probs=57.8
Q ss_pred CeEEEEEcC-C-CCEEEEEECCCeEEEEECCCCcEEEEecC-------------------CCCCcEEEEEccCCCCEEEE
Q 036953 97 STIAAAFSP-D-GRTLASTHGDHTVKIIDCQTGNCLKVLSG-------------------HRRTPWVVRFHPLRSEILAS 155 (792)
Q Consensus 97 ~V~sLafSP-D-G~~LaSGS~DGtVrIWDl~tgk~v~~L~g-------------------H~~~VtsVafSP~dg~lLaS 155 (792)
.|.++++.| + ...|..+...+.|...+ +.++.-..+.. ....|.+|.++|.+...+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 478899987 3 55666665555554443 23332222211 12357789998744444554
Q ss_pred EeCCCeEEEEECCCCcEEEEecc--------------CCCeeEEEEcCC-CcEEEEEcCCeEEEEEC
Q 036953 156 GSLDHEVRLWDANTSECIGSCDF--------------YRPIASIAFHAE-GELLAVASGHKLYIWPY 207 (792)
Q Consensus 156 gS~DgtVrLWDl~tg~~v~t~~h--------------~s~V~sVafSpd-G~~LasgSdd~V~IWDl 207 (792)
+..++.|...+-. ++....+.. ...+.++.++++ ...|.++..+.|+..+-
T Consensus 195 g~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D 260 (394)
T 3b7f_A 195 GMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDR 260 (394)
T ss_dssp EEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEET
T ss_pred EECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCC
Confidence 5444444443222 221111110 124788999986 35666666666666653
No 380
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=26.01 E-value=47 Score=33.57 Aligned_cols=72 Identities=19% Similarity=0.424 Sum_probs=39.1
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-----------eCCceeEE
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR-----------VSDMELVR 733 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 733 (792)
|.++..+ .++||||+... +....+.+-+|..... ..+.....+.|.+++. -.|+.|++
T Consensus 56 GtLI~~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~ 125 (276)
T 2jde_A 56 GSLMSPCWVISATHCFIDY---PKKEDYIVYLGRSRLN-------SNTQGEMKFEVENLILHKDYSADTLAHHNDIALLK 125 (276)
T ss_dssp EEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSS-------SCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEE
T ss_pred eEEeeCCEEEEcHHhccCC---CCcccEEEEecccccC-------CCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEE
Confidence 5556555 78999998642 1223344445544321 1122334566666532 35888888
Q ss_pred eecC------CCCceeeEEe
Q 036953 734 VLPS------AEDEVNVACF 747 (792)
Q Consensus 734 ~~~~------~~~~~n~~~~ 747 (792)
.-.. -.+.|.-+|.
T Consensus 126 L~~~~~~~~~~~~~v~picL 145 (276)
T 2jde_A 126 IRSKEGRCAQPSRTIQTICL 145 (276)
T ss_dssp EECTTSCCCCCBTTBCCCBC
T ss_pred eCCccccccccCCceEccCC
Confidence 6432 2345666665
No 381
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=25.97 E-value=3.3e+02 Score=27.79 Aligned_cols=99 Identities=11% Similarity=0.132 Sum_probs=54.0
Q ss_pred CCCEEEEEEC-C---------CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC--------------
Q 036953 106 DGRTLASTHG-D---------HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD-------------- 159 (792)
Q Consensus 106 DG~~LaSGS~-D---------GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D-------------- 159 (792)
+++.++.|+. + ..+.+||+.+.+-... +......-.+++. . ++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-H-NGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-E-TTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-E-CCEEEEEeCcCCCcCcccccchhhc
Confidence 5666666665 2 4688899887652221 1101111122222 3 67888888865
Q ss_pred -------------------------CeEEEEECCCCcEEEEe--ccCCCe-eEEEEcCCCcEEEEEcC-------CeEEE
Q 036953 160 -------------------------HEVRLWDANTSECIGSC--DFYRPI-ASIAFHAEGELLAVASG-------HKLYI 204 (792)
Q Consensus 160 -------------------------gtVrLWDl~tg~~v~t~--~h~s~V-~sVafSpdG~~LasgSd-------d~V~I 204 (792)
..+.+||+.+.+....- ...... .+++. -++++++.|+. ..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEE
Confidence 57899999887644332 211111 22322 25666666651 23788
Q ss_pred EEC
Q 036953 205 WPY 207 (792)
Q Consensus 205 WDl 207 (792)
||+
T Consensus 222 ~d~ 224 (357)
T 2uvk_A 222 LDF 224 (357)
T ss_dssp EEC
T ss_pred EEe
Confidence 887
No 382
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=25.69 E-value=56 Score=32.41 Aligned_cols=70 Identities=23% Similarity=0.442 Sum_probs=38.6
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------e--CCceeEE
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------V--SDMELVR 733 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~ 733 (792)
|.++..+ .++||||+. .+. .+-+-+|..... ..+.....++|.+++. . .|+.|++
T Consensus 32 GtLI~~~~VLTAAHC~~----~~~--~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~ 98 (241)
T 1bru_P 32 GTLVDQSWVLTAAHCIS----SSR--TYRVVLGRHSLS-------TNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLK 98 (241)
T ss_dssp EEEEETTEEEECGGGCC----TTS--CEEEEESCSBSS-------SCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred eEEeeCCEEEEcHHhcc----cCC--ceEEEEEccccc-------CCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEE
Confidence 4555555 889999986 232 233334443321 1123345677777653 1 6888887
Q ss_pred eecCCC--CceeeEEec
Q 036953 734 VLPSAE--DEVNVACFH 748 (792)
Q Consensus 734 ~~~~~~--~~~n~~~~~ 748 (792)
.-.... +.|.-+|.-
T Consensus 99 L~~~v~~~~~v~picLp 115 (241)
T 1bru_P 99 LASPVSLTDKIQLGCLP 115 (241)
T ss_dssp ESSCCCCCSSCCCCBCC
T ss_pred eCCCcccCCccCCcccC
Confidence 644432 356666663
No 383
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=25.28 E-value=44 Score=33.35 Aligned_cols=69 Identities=22% Similarity=0.449 Sum_probs=37.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. ....+. +|.-... ..+.....++|.+++. -.|+.|++.-
T Consensus 44 GtLI~~~~VLTAAHC~~~-----~~~~v~--~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 109 (245)
T 1t8o_A 44 GSLINENWVVTAAHCGVT-----TSDVVV--AGEFDQG-------SSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLS 109 (245)
T ss_dssp EEEEETTEEEECGGGCCC-----TTSEEE--ESCSBTT-------CSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEES
T ss_pred EEEeeCCEEEEcHHhCcC-----CCcEEE--EeeeecC-------CCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEEC
Confidence 4555555 7899999864 222333 3432210 1123345667777654 2578888764
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|.-
T Consensus 110 ~~~~~~~~v~picLp 124 (245)
T 1t8o_A 110 TAASFSQTVSAVCLP 124 (245)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CCCcCCCceeeeECC
Confidence 4433 356666663
No 384
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=25.13 E-value=30 Score=34.18 Aligned_cols=71 Identities=23% Similarity=0.406 Sum_probs=39.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+... .| ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 30 GtLIs~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 98 (238)
T 1ym0_A 30 GSIINDRWVVCAAHCMQGE--AP--ALVSLVVGEHDSS-------AASTVRQTHDVDSIFVNENYDPATLENDVSVIKTA 98 (238)
T ss_dssp EEEEETTEEEECHHHHTTC--CG--GGEEEEESCSBTT-------SCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEECHHhCCCC--CC--ceEEEEEcccccC-------CCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeC
Confidence 4555555 78999999653 23 3344445544321 1223345677777754 3578888754
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 99 ~~~~~~~~v~picL 112 (238)
T 1ym0_A 99 VAITFDINVGPICA 112 (238)
T ss_dssp SCCCCSSSCCCCBC
T ss_pred CCccccCcccccCC
Confidence 3332 34555565
No 385
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=24.86 E-value=68 Score=31.17 Aligned_cols=67 Identities=21% Similarity=0.325 Sum_probs=37.2
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 735 (792)
|.++..+ .++||||+.+ .+.+-+|.... ...+....++.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (227)
T 3fzz_A 32 GFLVRDKFVLTAAHCKGR--------SMTVTLGAHNI-------KAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLV 96 (227)
T ss_dssp EEEEETTEEEECTTCCCE--------EEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEEeCCEEEECcccCCC--------CcEEEEccccc-------CCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEEC
Confidence 5555555 7899999732 23344444332 112333456677776532 588888864
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 97 ~~~~~~~~v~picL 110 (227)
T 3fzz_A 97 RNAKRTRAVRPLNL 110 (227)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcCCCCCcccccCC
Confidence 4432 34555665
No 386
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=24.82 E-value=38 Score=33.07 Aligned_cols=69 Identities=19% Similarity=0.326 Sum_probs=38.8
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE--------eCCceeEEeec
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR--------VSDMELVRVLP 736 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 736 (792)
|.++..+ .++||||+.. .....+.+-+|.... ......+.|.+++. -.|+.|++.-.
T Consensus 28 GtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~----------~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~ 93 (235)
T 3h7t_A 28 GSILTANFVITAAQCVDG----TKPSDISIHYGSSYR----------TTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEM 93 (235)
T ss_dssp EEESSSSEEEECHHHHTT----CCGGGEEEEESCSBS----------SSSSEEEEEEEEEECSCBTTTTBTCCEEEEESS
T ss_pred EEEeeCCEEEECHHHCCC----CCCCeeEEEcCcccc----------ccCCceeeeeeEEeeecCCCCCCCCeEEEEecc
Confidence 5555555 7899999962 223445555665443 12225666666654 35788777643
Q ss_pred CCC--C-ceeeEEec
Q 036953 737 SAE--D-EVNVACFH 748 (792)
Q Consensus 737 ~~~--~-~~n~~~~~ 748 (792)
... + .|.-+|.-
T Consensus 94 ~v~~~~~~v~pi~Lp 108 (235)
T 3h7t_A 94 PIKLDDKTTKKIELP 108 (235)
T ss_dssp CCCCCSSSCCCCBCC
T ss_pred ccccCCccccceecC
Confidence 332 1 45556653
No 387
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=24.56 E-value=5.3e+02 Score=25.66 Aligned_cols=101 Identities=13% Similarity=0.116 Sum_probs=56.2
Q ss_pred CCCEEEEEECC-----CeEEEEECCCCcEEEE--ecCCCCCcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcEE
Q 036953 106 DGRTLASTHGD-----HTVKIIDCQTGNCLKV--LSGHRRTPWVVRFHPLRSEILASGSLD-----HEVRLWDANTSECI 173 (792)
Q Consensus 106 DG~~LaSGS~D-----GtVrIWDl~tgk~v~~--L~gH~~~VtsVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~v 173 (792)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 56667776533 4688899877652221 1111112222333 56788887765 45889999887544
Q ss_pred EEec--cCC-CeeEEEEcCCCcEEEEEc-C-----CeEEEEECCCCC
Q 036953 174 GSCD--FYR-PIASIAFHAEGELLAVAS-G-----HKLYIWPYNNKE 211 (792)
Q Consensus 174 ~t~~--h~s-~V~sVafSpdG~~LasgS-d-----d~V~IWDlrt~~ 211 (792)
..-. ... ....+.+ ++++++.|+ + +.+.+||+.+.+
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 3221 111 1122222 667777765 2 339999997765
No 388
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=24.48 E-value=48 Score=32.73 Aligned_cols=74 Identities=24% Similarity=0.353 Sum_probs=40.6
Q ss_pred chhhhhH-HhhhccceeEEEe-ccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEe
Q 036953 666 GSVLVSR-AIRAAHCLTSIQF-SPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRV 734 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 734 (792)
|.++..+ .++||||+..... .|. .+.+-+|..... ..+.....++|.+++. -.|+.|++.
T Consensus 32 GtLIs~~~VLTAAHC~~~~~~~~~~--~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L 102 (237)
T 2f91_A 32 ASIYNENYAITAGHCVYGDDYENPS--GLQIVAGELDMS-------VNEGSEQIITVSKIILHENFDYNLLDNDISLLKL 102 (237)
T ss_dssp EEEEETTEEEECGGGTTTSCTTSCC--SEEEEESCSBTT-------SCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred EEEeeCCEEEEcHHhCCCCccCCcc--cEEEEECCeecc-------CCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 5555555 8899999864321 222 334444543321 1123346677777754 358888876
Q ss_pred ecCCC--CceeeEEec
Q 036953 735 LPSAE--DEVNVACFH 748 (792)
Q Consensus 735 ~~~~~--~~~n~~~~~ 748 (792)
-.... +.|.-+|.-
T Consensus 103 ~~~v~~~~~v~picLp 118 (237)
T 2f91_A 103 SGSLTFNDNVAPIALP 118 (237)
T ss_dssp SSCCCCBTTBCCCBCC
T ss_pred CCCcccCCceeeccCC
Confidence 54333 345556653
No 389
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=24.34 E-value=37 Score=33.15 Aligned_cols=72 Identities=21% Similarity=0.439 Sum_probs=40.4
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE--------eCCceeEEeec
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR--------VSDMELVRVLP 736 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 736 (792)
|.++..+ .++||||+... .+ ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-.
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 96 (218)
T 2z7f_E 28 ATLIAPNFVMSAAHCVANV--NV--RAVRVVLGAHNLS-------RREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNG 96 (218)
T ss_dssp EEEEETTEEEECHHHHTTS--CG--GGCEEEESCSBTT-------SCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESS
T ss_pred EEEccCCEEEEcHHhcCCC--Cc--CcEEEEEeceecC-------CCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECC
Confidence 4555555 78999999642 22 2334444443321 1223345677777754 36888888654
Q ss_pred CCC--CceeeEEec
Q 036953 737 SAE--DEVNVACFH 748 (792)
Q Consensus 737 ~~~--~~~n~~~~~ 748 (792)
... +.|.-+|.-
T Consensus 97 ~~~~~~~v~picL~ 110 (218)
T 2z7f_E 97 SATINANVQVAQLP 110 (218)
T ss_dssp CCCCSSSCCCCCCC
T ss_pred cCcCCCceeccCcC
Confidence 433 356667764
No 390
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=24.16 E-value=46 Score=32.81 Aligned_cols=68 Identities=29% Similarity=0.477 Sum_probs=36.4
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-------------------
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR------------------- 725 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 725 (792)
|.++..+ .++||||+.. .+-+-+|.... .+.+.....+.|.+++.
T Consensus 28 GsLIs~~~VLTAAHC~~~--------~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~ 92 (238)
T 1spj_A 28 GILVHRQWVLTAAHCISD--------NYQLWLGRHNL-------FDDENTAQFVHVSESFPHPGFNMSLLENHTRQADED 92 (238)
T ss_dssp EEEEETTEEEECGGGCCS--------SEEEEESCSBT-------TSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCC
T ss_pred EEEecCCEEEEcHHhCCC--------CceEEEEeccc-------cCCCCCceEEEEEEEEcCCCcccccccccccccccc
Confidence 4445544 7899999852 22333444332 12233445666666642
Q ss_pred -eCCceeEEeecCCC---CceeeEEec
Q 036953 726 -VSDMELVRVLPSAE---DEVNVACFH 748 (792)
Q Consensus 726 -~~~~~~~~~~~~~~---~~~n~~~~~ 748 (792)
-.|+.|++.-.... +.|..+|.-
T Consensus 93 ~~~DIALl~L~~~~~~~~~~v~pi~L~ 119 (238)
T 1spj_A 93 YSHDLMLLRLTEPADTITDAVKVVELP 119 (238)
T ss_dssp CTTCCEEEEESSCCCCSSTTCCCCCCC
T ss_pred CCCCeEEEEECccccccCCceeeccCC
Confidence 24788887644332 345556653
No 391
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=24.11 E-value=36 Score=34.01 Aligned_cols=73 Identities=22% Similarity=0.386 Sum_probs=41.2
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.... ..+.+.+-+|.-... ..+.....++|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~~---~~~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 97 (254)
T 2bz6_H 28 GTLINTIWVVSAAHCFDKIK---NWRNLIAVLGEHDLS-------EHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLH 97 (254)
T ss_dssp EEECSSSEEEECGGGGTTCS---CGGGEEEEESCCBTT-------CCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEES
T ss_pred EEEecCCEEEECHHHcCCCC---CcceEEEEECCcccC-------CCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEEC
Confidence 4455555 789999986422 123345555654321 1122345677777754 2588888865
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|.-
T Consensus 98 ~~v~~~~~v~picLp 112 (254)
T 2bz6_H 98 QPVVLTDHVVPLCLP 112 (254)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CccccCCCccceECC
Confidence 4443 456667763
No 392
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=23.98 E-value=31 Score=33.64 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=39.9
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE--------eCCceeEEeec
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR--------VSDMELVRVLP 736 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 736 (792)
|.++..+ .++||||+.. .....+.+.+|..... .......+.|.+++. -.|+.|++.-.
T Consensus 30 GtLI~~~~VLTAAHC~~~----~~~~~~~v~~g~~~~~--------~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 97 (228)
T 3h7o_A 30 GAILSQWFVLTAAHCVFD----QKPETIVIQYESTNLW--------EDPGKSDPYVSHVYLSFYRQETMENDIAILELSR 97 (228)
T ss_dssp EEESSSSEEEECHHHHTT----SCGGGCEEEESCSBTT--------TBCCEEECCEEEEEESSCBTTTTBTCCEEEEESS
T ss_pred eEEeeCCEEEEcHHhccc----CCCCcEEEEecccccc--------cCCCceeeeEEEEEccccCCCCccCCEEEEEECC
Confidence 5566555 7899999962 2234455555554431 112225556666654 36888888644
Q ss_pred CCC--C-ceeeEEec
Q 036953 737 SAE--D-EVNVACFH 748 (792)
Q Consensus 737 ~~~--~-~~n~~~~~ 748 (792)
... + .|..+|.-
T Consensus 98 ~v~~~~~~v~pi~lp 112 (228)
T 3h7o_A 98 PLKLDGLKSKPAKLP 112 (228)
T ss_dssp CCCCCSSSSCCCBCC
T ss_pred cccccccccccccCC
Confidence 332 2 45666664
No 393
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=23.20 E-value=52 Score=32.29 Aligned_cols=67 Identities=18% Similarity=0.291 Sum_probs=35.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+. . .+.+-+|.... .+.+.....++|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~------~--~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~ 92 (223)
T 1lo6_A 28 GVLIHPLWVLTAAHCKK------P--NLQVFLGKHNL-------RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLA 92 (223)
T ss_dssp EEEEETTEEEECGGGCC------T--TCEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred eEEecCCEEEECccCCC------C--CeEEEEcceec-------CCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEEC
Confidence 5555555 789999975 1 22333344322 11223345666776653 3578887754
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 93 ~~~~~~~~v~pi~l 106 (223)
T 1lo6_A 93 RPAKLSELIQPLPL 106 (223)
T ss_dssp SCCCCBTTBCCCCB
T ss_pred CcccCCCceeeccc
Confidence 4332 23444554
No 394
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=23.03 E-value=29 Score=34.27 Aligned_cols=70 Identities=16% Similarity=0.302 Sum_probs=36.5
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. +. .+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 28 GtLI~~~~VLTAAHC~~~----~~--~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~ 94 (226)
T 1azz_A 28 GSLISPEWILTAAHCMDG----AG--FVDVVLGAHNIR-------EDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLP 94 (226)
T ss_dssp EEEEETTEEEECHHHHTT----CS--CEEEEESCSBSS-------SCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECS
T ss_pred EEEecCCEEEEhHHhcCC----CC--ceEEEEcceEcC-------CCCCccEEEEEEEEEECCCCCCCCCCCceEEEEEC
Confidence 4455555 8899999864 22 233444443321 1122334455555543 3688888754
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|.-
T Consensus 95 ~~~~~~~~v~picL~ 109 (226)
T 1azz_A 95 VPVTLTAAIATVGLP 109 (226)
T ss_dssp SCCCCCSSSCCCBCC
T ss_pred CccccCCCcccccCC
Confidence 3332 345556653
No 395
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=22.87 E-value=57 Score=40.52 Aligned_cols=38 Identities=21% Similarity=0.360 Sum_probs=32.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEec
Q 036953 97 STIAAAFSPDGRTLASTHGDHTVKIIDCQTGNCLKVLS 134 (792)
Q Consensus 97 ~V~sLafSPDG~~LaSGS~DGtVrIWDl~tgk~v~~L~ 134 (792)
.+.+++..++..++++-+.|+++||||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566667788899999999999999999999987754
No 396
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=22.69 E-value=55 Score=32.09 Aligned_cols=69 Identities=20% Similarity=0.329 Sum_probs=37.8
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.. .+.+-+|..... .+.+.....+++.+++. -.|+.|++.-
T Consensus 28 GsLIs~~~VLTAAHC~~~--------~~~v~~g~~~~~------~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~ 93 (223)
T 2bdg_A 28 GVLVHPQWVLSAAHCFQN--------SYTIGLGLHSLE------ADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLD 93 (223)
T ss_dssp EEEEETTEEEECGGGCCS--------SEEEEESCSBSC------GGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEES
T ss_pred EEEecCCEEEEhHHhCCC--------CeEEEEeeeecC------CCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEEC
Confidence 4455544 7899999852 233444443321 12233445677777654 3588888765
Q ss_pred cCCC--CceeeEEec
Q 036953 736 PSAE--DEVNVACFH 748 (792)
Q Consensus 736 ~~~~--~~~n~~~~~ 748 (792)
.... +.|.-+|..
T Consensus 94 ~~v~~~~~v~pi~l~ 108 (223)
T 2bdg_A 94 ESVSESDTIRSISIA 108 (223)
T ss_dssp SCCCCCSSCCCCCBC
T ss_pred CcccCCCceecccCC
Confidence 4433 345555653
No 397
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=22.31 E-value=53 Score=32.69 Aligned_cols=73 Identities=25% Similarity=0.440 Sum_probs=38.5
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---eCCceeEEeecCCC--
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---VSDMELVRVLPSAE-- 739 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 739 (792)
|.++..+ .++||||+.... .|.. +.+-+|.... .+.+.....+.|.++|. -.|+.|++.-....
T Consensus 46 GsLIs~~~VLTAAHC~~~~~-~~~~--~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~ 115 (247)
T 1ddj_A 46 GTLISPEWVLTAAHCLEKSP-RPSS--YKVILGAHQE-------VNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVIT 115 (247)
T ss_dssp EEEEETTEEEECGGGGTTCS-CGGG--CEEEESCSBS-------SSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCC
T ss_pred EEEeeCCEEEEcHHHcCCCC-CCcc--EEEEEccccc-------CccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeC
Confidence 4444444 789999986421 2332 3333443322 01123345566777765 35888887644332
Q ss_pred CceeeEEec
Q 036953 740 DEVNVACFH 748 (792)
Q Consensus 740 ~~~n~~~~~ 748 (792)
+.|.-+|.-
T Consensus 116 ~~v~picLp 124 (247)
T 1ddj_A 116 DKVIPACLP 124 (247)
T ss_dssp SSCCCCBCC
T ss_pred CCEEeeecC
Confidence 345556653
No 398
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=22.02 E-value=49 Score=32.57 Aligned_cols=73 Identities=27% Similarity=0.404 Sum_probs=38.9
Q ss_pred chhhhhH-HhhhccceeEEE------------eccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE-------
Q 036953 666 GSVLVSR-AIRAAHCLTSIQ------------FSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR------- 725 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 725 (792)
|.++..+ .++||||+..-. .+|.. +.+-+|.... ...+.....+.|.+++.
T Consensus 29 GtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~--~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~ 99 (251)
T 3gov_B 29 GSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSD--FKIILGKHWR-------LRSDENEQHLGVKHTTLHPQYDPN 99 (251)
T ss_dssp EEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGG--EEEEESCCBS-------SSCCSSCEEECEEEEEECTTCBTT
T ss_pred EEEecCCEEEECHhhcccccccccccccccccccccc--EEEEecceec-------cCCCCcceEeeeEEEEECCCCCCC
Confidence 5556555 789999996521 23333 3333443322 11223345566666653
Q ss_pred --eCCceeEEeecCCC--CceeeEEe
Q 036953 726 --VSDMELVRVLPSAE--DEVNVACF 747 (792)
Q Consensus 726 --~~~~~~~~~~~~~~--~~~n~~~~ 747 (792)
-.|+.|++.-.... +.|.-+|.
T Consensus 100 ~~~~DIAll~L~~~~~~~~~v~picL 125 (251)
T 3gov_B 100 TFENDVALVELLESPVLNAFVMPICL 125 (251)
T ss_dssp TTBTCCEEEEESSCCCCSSSCCCCBC
T ss_pred CCCCCEEEEEeCCcccCCCceEEeEC
Confidence 25888888654443 34445555
No 399
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=22.01 E-value=68 Score=31.18 Aligned_cols=67 Identities=24% Similarity=0.355 Sum_probs=37.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 735 (792)
|.++..+ .++||||+. +.+.+-+|.... .+.+.....+.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAhC~~--------~~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (226)
T 4ag1_A 32 GFLIRRNFVLTAAHCAG--------RSITVTLGAHNI-------TEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLK 96 (226)
T ss_dssp EEEEETTEEEECGGGCC--------SEEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEeCCEEEECcccCC--------CCeEEEeCCccc-------CCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEEC
Confidence 5555555 789999983 234455554432 122334456777776542 478888764
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|..+|.
T Consensus 97 ~~~~~~~~v~pi~l 110 (226)
T 4ag1_A 97 EKASLTLAVGTLPF 110 (226)
T ss_dssp SCCCCCSSSCCCCC
T ss_pred CCCccCCceecccc
Confidence 3322 34445554
No 400
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=21.57 E-value=51 Score=32.74 Aligned_cols=74 Identities=23% Similarity=0.425 Sum_probs=40.7
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+... +.| ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 34 GtLI~~~~VLTAAHC~~~~-~~~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 103 (252)
T 1rtf_B 34 GILISSCWILSAAHCFQER-FPP--HHLTVILGRTYRV-------VPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLK 103 (252)
T ss_dssp EEECSSSEEEECGGGGTTC-CCG--GGEEEEESCSBSS-------SCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEEC
T ss_pred EEEEeCCEEEECHHHCCCC-CCc--ccEEEEeCccccc-------CCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEEC
Confidence 4445554 78999998642 223 2344444543321 1123345677777754 3588888864
Q ss_pred cC------CCCceeeEEecc
Q 036953 736 PS------AEDEVNVACFHP 749 (792)
Q Consensus 736 ~~------~~~~~n~~~~~~ 749 (792)
.. -.+.|.-+|.-+
T Consensus 104 ~~~~~~~~~~~~v~picLp~ 123 (252)
T 1rtf_B 104 SDSSRCAQESSVVRTVCLPP 123 (252)
T ss_dssp CSSSCCSCCBTTBCCCBCCC
T ss_pred CccccccccCCceeceeCCC
Confidence 33 134566777643
No 401
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=21.57 E-value=61 Score=31.76 Aligned_cols=67 Identities=21% Similarity=0.353 Sum_probs=36.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+. .. +.+-+|...... .+.....++|.+++. -.|+.|++.-
T Consensus 27 GsLIs~~~VLTAAHC~~------~~--~~v~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (223)
T 3mfj_A 27 GSLINSQWVVSAAHCYK------SG--IQVRLGEDNINV-------VEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEEEETTEEEECGGGCC------SS--CEEEESCSSTTS-------CCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEecCCEEEEhHHhcC------CC--cEEEECCceecc-------cCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeC
Confidence 5555555 789999983 22 223334333211 122345667776653 3588888865
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 92 ~~~~~~~~v~picL 105 (223)
T 3mfj_A 92 SAASLNSRVASISL 105 (223)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CCcccCCcEeeeEC
Confidence 4433 34555665
No 402
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=21.35 E-value=56 Score=31.77 Aligned_cols=67 Identities=22% Similarity=0.349 Sum_probs=36.3
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEEe---------CCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYRV---------SDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 735 (792)
|.++..+ .++||||+.+ .+.+-+|...... .+.....+.|.+++.- .|+.|++.-
T Consensus 27 GtLI~~~~VLTAAhC~~~--------~~~v~~g~~~~~~-------~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~ 91 (223)
T 4i8h_A 27 GSLINSQWVVSAAHCYKS--------GIQVRLGEDNINV-------VEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEECSSSEEEECGGGCCS--------SCEEEESCSSTTS-------CCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEcCCEEEecHHhCCC--------CcEEEEccccccc-------cCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEEC
Confidence 5556555 6899999862 2233334333211 1223345667776553 488888764
Q ss_pred cCCC--CceeeEEe
Q 036953 736 PSAE--DEVNVACF 747 (792)
Q Consensus 736 ~~~~--~~~n~~~~ 747 (792)
.... +.|.-+|.
T Consensus 92 ~~~~~~~~v~pi~l 105 (223)
T 4i8h_A 92 SAASLNSRVASISL 105 (223)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CcCcCCCceeceEC
Confidence 4332 34555555
No 403
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=20.99 E-value=7.1e+02 Score=25.82 Aligned_cols=70 Identities=7% Similarity=-0.075 Sum_probs=36.3
Q ss_pred CCeEEEEEcC-CCCEEEEEECCC----eEEEEECCCCcEEEEecC--------------CCCCcEEEEEccCC-CCEEEE
Q 036953 96 RSTIAAAFSP-DGRTLASTHGDH----TVKIIDCQTGNCLKVLSG--------------HRRTPWVVRFHPLR-SEILAS 155 (792)
Q Consensus 96 ~~V~sLafSP-DG~~LaSGS~DG----tVrIWDl~tgk~v~~L~g--------------H~~~VtsVafSP~d-g~lLaS 155 (792)
..|.+|+++| +...|..+...+ .|... .+.++.-..+.. ....|.++++.|.+ ...+..
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4599999998 344444444444 34332 233332222210 11247788888643 455666
Q ss_pred EeCCCeEEEEE
Q 036953 156 GSLDHEVRLWD 166 (792)
Q Consensus 156 gS~DgtVrLWD 166 (792)
++..+.|...+
T Consensus 134 g~~~ggl~~S~ 144 (394)
T 3b7f_A 134 GTSPQGLFRST 144 (394)
T ss_dssp EEETTEEEEES
T ss_pred EecCCcEEEEc
Confidence 66666555543
No 404
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=20.53 E-value=14 Score=38.72 Aligned_cols=21 Identities=38% Similarity=0.597 Sum_probs=17.6
Q ss_pred eecccCccccc-ccceeeeeeec
Q 036953 595 LCSEMGAHFSP-CGRYLAACVAC 616 (792)
Q Consensus 595 ~~~~~~~~~~~-~~~~~~~~~~~ 616 (792)
|+ .=|.|-|+ -|+||+|||-.
T Consensus 199 l~-~Dg~Hps~~~GsYLaA~v~y 220 (271)
T 4i8i_A 199 MN-RDGYHLDLTIGRYTAACTWF 220 (271)
T ss_dssp CB-SSSSSBCTTHHHHHHHHHHH
T ss_pred cc-CCCCCCCCccCHHHHHHHHH
Confidence 44 44999999 99999999854
No 405
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=20.43 E-value=66 Score=31.41 Aligned_cols=71 Identities=20% Similarity=0.318 Sum_probs=39.8
Q ss_pred chhhhhH-HhhhccceeEEEeccCcceeEEEeccccccceeEEEecCCcccceeEEEEEEE---------eCCceeEEee
Q 036953 666 GSVLVSR-AIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTSPIYTVLEVYR---------VSDMELVRVL 735 (792)
Q Consensus 666 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 735 (792)
|.++..+ .++||||+.... ....+.+-+|.... +.....+.|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~~---~~~~~~v~~G~~~~----------~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 94 (222)
T 1eq9_A 28 ASILDNNNVLTAAHCVDGLS---NLNRLKVHVGTNYL----------SESGDVYDVEDAVVNKNYDDFLLRNDVALVHLT 94 (222)
T ss_dssp EEECSSSEEEECHHHHTTCS---CGGGEEEEESCSBT----------TSCCEEEEEEEEEECTTCBTTTTBCCCEEEEES
T ss_pred EEEeeCCEEEEhhhcCCCCC---CCceEEEEECceec----------CCCCeEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 4555555 789999986421 11233344444322 22345677777754 3588888865
Q ss_pred cCCC--CceeeEEecc
Q 036953 736 PSAE--DEVNVACFHP 749 (792)
Q Consensus 736 ~~~~--~~~n~~~~~~ 749 (792)
.... +.|.-+|.-+
T Consensus 95 ~~v~~~~~v~picL~~ 110 (222)
T 1eq9_A 95 NPIKFNDLVQPIKLST 110 (222)
T ss_dssp SCCCCBTTBCCCEECS
T ss_pred CccccCCceEccCCCC
Confidence 4443 3466677643
Done!