BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036966
         (546 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
           GN=At1g04910 PE=1 SV=1
          Length = 519

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/501 (80%), Positives = 449/501 (89%), Gaps = 3/501 (0%)

Query: 46  VGKLSIAVVVLLICTLCLLFSATTIGGGHGSYSATKINVEELWGSAKSGSWRPSSAPRSV 105
           V KLSI V+VLLICTL LLFSA  IG        +KINVEELW SAKSG WRPSSAPRS 
Sbjct: 22  VAKLSIGVIVLLICTLSLLFSAN-IGSNREPTRPSKINVEELWESAKSGGWRPSSAPRSD 80

Query: 106 WPPPPQESNGYLRVRCNGGLNQQRTAICNAVLAARIMNATLVLPELDANSFWHDDSGFQG 165
           WPPP +E+NGYLRVRCNGGLNQQR+AICNAVLAARIMNATLVLPELDANSFWHDDSGFQG
Sbjct: 81  WPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQG 140

Query: 166 IYDVEHFIQTLRYDVQIVESIPEIHKNGKTKKIKAYQLRPPRDAPISWYLTEAMEQMKKH 225
           IYDVEHFI+TL+YDV+IV  IP++HKNGKTKKIKA+Q+RPPRDAPI WYLT A++ M++H
Sbjct: 141 IYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAFQIRPPRDAPIEWYLTTALKAMREH 200

Query: 226 GAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPNIMKLSESIVDKLRAEGHFMSIH 285
            AIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKP+IMKLSESIVDKLR++GHFMSIH
Sbjct: 201 SAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRSQGHFMSIH 260

Query: 286 LRFEMDMLAFAGCFDIFKPEQQRILKKYREENFKEKKLVYKERRAIGKCPLTPEEVGLIL 345
           LRFEMDMLAFAGCFDIF PE+Q+IL+KYR+ENF +K+L+Y ERRAIGKCPLTPEEVGLIL
Sbjct: 261 LRFEMDMLAFAGCFDIFNPEEQKILRKYRKENFADKRLIYNERRAIGKCPLTPEEVGLIL 320

Query: 346 RAMGFDNSTKIYLAAGELFGGEKFMKPFRALFPHLENHSSVDPSEELVTNTRGLLGSAVD 405
           RAM FDNST+IYLAAGELFGGE+FMKPFR LFP L+NHSSVDPSEEL   ++GL+GSAVD
Sbjct: 321 RAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLDNHSSVDPSEELSATSQGLIGSAVD 380

Query: 406 YMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKGLAPIFIDRENGRTAGFE 465
           YMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRK LAPIFI RE G+ AGFE
Sbjct: 381 YMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRAGFE 440

Query: 466 EAVRHVMLKTNFGGPHKRVPPESFYTNSWPECFCQISAQNPADECPPDNVLDILNSRLES 525
           EAVR VMLKTNFGGPHKRV PESFYTNSWPECFCQ++ +  +D+CPP+NV++IL+SRLES
Sbjct: 441 EAVRRVMLKTNFGGPHKRVSPESFYTNSWPECFCQMNPKKSSDKCPPNNVIEILDSRLES 500

Query: 526 EARSNSQSLTQGNFSTSILER 546
               +S S  Q N + + LER
Sbjct: 501 IRDPDSTS--QTNSTVTGLER 519


>sp|Q6JAN0|GPR98_DANRE G-protein coupled receptor 98 OS=Danio rerio GN=gpr98 PE=2 SV=1
          Length = 6199

 Score = 35.4 bits (80), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 67   ATTIGGGHGSYSATKI--NVEELWGSAKSGSWRPSSAPRSVWPPPPQE 112
            A T+GGG  S S   +   +EE+    +  S RPSS P S++ P PQ+
Sbjct: 6081 AATVGGGEISKSTQNLISAMEEISADWERASLRPSSQPSSIFKPSPQD 6128


>sp|Q0UPL5|PAN2_PHANO PAB-dependent poly(A)-specific ribonuclease subunit PAN2
           OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
           FGSC 10173) GN=PAN2 PE=3 SV=1
          Length = 1129

 Score = 34.3 bits (77), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 18/28 (64%)

Query: 437 GFRTTIRPDRKGLAPIFIDRENGRTAGF 464
           G R TIRPDRKGLA + + R  G  AG 
Sbjct: 900 GTRQTIRPDRKGLARVSVCRGEGEHAGL 927


>sp|O28164|GATB_ARCFU Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
           OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
           DSM 4304 / JCM 9628 / NBRC 100126) GN=gatB PE=3 SV=2
          Length = 471

 Score = 32.3 bits (72), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 11/61 (18%)

Query: 266 KLSES-IVDKLRAEGHFMSIHLRFEMDMLAFAGCFDIFKPEQ-QRILKKYREENFKEKKL 323
           KL+ S IVD LR E ++            +FA C+++FKPE+  ++LK + E+   EK +
Sbjct: 335 KLAASWIVDVLRGELNYRD---------WSFAKCWEVFKPEEFAKLLKYFEEDRITEKGV 385

Query: 324 V 324
           V
Sbjct: 386 V 386


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.136    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,852,766
Number of Sequences: 539616
Number of extensions: 9349995
Number of successful extensions: 20589
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 20584
Number of HSP's gapped (non-prelim): 10
length of query: 546
length of database: 191,569,459
effective HSP length: 122
effective length of query: 424
effective length of database: 125,736,307
effective search space: 53312194168
effective search space used: 53312194168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)