BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036970
(337 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 17/293 (5%)
Query: 41 DCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI 100
D F++ + G+VYK L + G ++ +K++ + EL Q
Sbjct: 38 DNFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERXQGGEL-------------QF 82
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH 160
Q+E+ HRN++ L + P LLVY + NGS+ L + + + LDW R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 142
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
RIA G A GL YLH P+IIHRD++ AN+L+D++ EA + +FGLAK + + +
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXX 201
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD-DFFQHTKEMSFVQWMR 279
++ T+G+IAPE T S+K D++ +GV+L L+ G+ D + ++ + W++
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 280 NVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
++ + +D L GN +E++ ++++A CT P ERP +V ML
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 17/279 (6%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G+VYK L + G ++ +K++ + EL Q Q+E+ HRN
Sbjct: 44 GKVYKGRL--ADGXLVAVKRLKEERTQGGEL-------------QFQTEVEMISMAVHRN 88
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
++ L + P LLVY + NGS+ L + + + LDW R RIA G A GL YLH
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
P+IIHRD++ AN+L+D++ EA + +FGLAK + + + ++ +G+IAPE
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAVRGXIGHIAPEYL 207
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFPSD-DFFQHTKEMSFVQWMRNVMTSENPSRTIDS 293
T S+K D++ +GV+L L+ G+ D + ++ + W++ ++ + +D
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267
Query: 294 KLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
L GN +E++ ++++A CT P ERP +V ML
Sbjct: 268 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VYK + ++ + +KK+ + E +KQ Q EI + +H N
Sbjct: 45 GVVYKGYVNNTT---VAVKKLAAMVDITTEELKQ----------QFDQEIKVMAKCQHEN 91
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V LL D LVY + NGSL D L G L W R +IA+G A+G+ +LH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + T Y+APE
Sbjct: 151 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSK 294
+ ++ K DIYSFGV+L ++ G P+ D +H + + + E K
Sbjct: 208 RG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 295 LIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
+ + + + +A C + +RP+ K V+ +L ++
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VYK + ++ + +KK+ + E +KQ Q EI + +H N
Sbjct: 45 GVVYKGYVNNTT---VAVKKLAAMVDITTEELKQ----------QFDQEIKVMAKCQHEN 91
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V LL D LVY + NGSL D L G L W R +IA+G A+G+ +LH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + T Y+APE
Sbjct: 151 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSK 294
+ ++ K DIYSFGV+L ++ G P+ D +H + + + E K
Sbjct: 208 RG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 295 LIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
+ + + + +A C + +RP+ K V+ +L ++
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VYK + ++ + +KK+ + E +KQ Q EI + +H N
Sbjct: 39 GVVYKGYVNNTT---VAVKKLAAMVDITTEELKQ----------QFDQEIKVMAKCQHEN 85
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V LL D LVY + NGSL D L G L W R +IA+G A+G+ +LH
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + T Y+APE
Sbjct: 145 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSK 294
+ ++ K DIYSFGV+L ++ G P+ D +H + + + E K
Sbjct: 202 RG-EITPKSDIYSFGVVLLEIITG-LPAVD--EHREPQLLLDIKEEIEDEEKTIEDYIDK 257
Query: 295 LIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
+ + + + +A C + +RP+ K V+ +L ++
Sbjct: 258 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VYK + ++ + +KK+ + E +KQ Q EI + +H N
Sbjct: 36 GVVYKGYVNNTT---VAVKKLAAMVDITTEELKQ----------QFDQEIKVXAKCQHEN 82
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V LL D LVY + NGSL D L G L W R +IA+G A+G+ +LH
Sbjct: 83 LVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+H IHRDI+ AN+L+D+ A+IS+FGLA+ + T Y APE
Sbjct: 142 ENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 235 QTVALSDKCDIYSFGVLLAVLMMG 258
+ ++ K DIYSFGV+L ++ G
Sbjct: 199 RG-EITPKSDIYSFGVVLLEIITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 6/219 (2%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
RH ++V L+ + +L+Y++ NG+L+ LY + W R I G A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
YLH IIHRD++ N+L+D++ +I++FG++K+ + T+GYI
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 231 PECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM-SFVQWMRNVMTSENPSR 289
PE L++K D+YSFGV+L ++ + S +EM + +W + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 290 TIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDV 328
+D L E + A C E+RP+ DV
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 6/219 (2%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
RH ++V L+ + +L+Y++ NG+L+ LY + W R I G A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
YLH IIHRD++ N+L+D++ +I++FG++K+ + T+GYI
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 231 PECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM-SFVQWMRNVMTSENPSR 289
PE L++K D+YSFGV+L ++ + S +EM + +W + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR--SAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 290 TIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDV 328
+D L E + A C E+RP+ DV
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 47 EKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMI-QIQSEII 105
EKI + G V++AE GS + +K L++QD H + + + E+
Sbjct: 43 EKIGAGSFGTVHRAEWHGSD---VAVKI----------LMEQD---FHAERVNEFLREVA 86
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARG 165
++RH NIV + V +P +V E+ GSL +L+ S R +LD R +A
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYD 145
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ YLH + P I+HR+++ N+L+D ++ +FGL++ T ++ S A T
Sbjct: 146 VAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGT 202
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL 252
++APE + ++K D+YSFGV+L
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVIL 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 47 EKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMI-QIQSEII 105
EKI + G V++AE GS + +K L++QD H + + + E+
Sbjct: 43 EKIGAGSFGTVHRAEWHGSD---VAVKI----------LMEQD---FHAERVNEFLREVA 86
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARG 165
++RH NIV + V +P +V E+ GSL +L+ S R +LD R +A
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYD 145
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ YLH + P I+HRD++ N+L+D ++ +FGL++ + A T
Sbjct: 146 VAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGT 202
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL 252
++APE + ++K D+YSFGV+L
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVIL 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 61 ELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLA 120
E+ GS + P K + + + + E M ++ EI Q H NIV
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 121 RVVRPDCDLLVYEFRRNGSLQDIL-YDVSQGRRELDWLARHRIA---RGIASGLEYLHMS 176
V D LV + GS+ DI+ + V++G + L IA R + GLEYLH +
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG---YIAPEC 233
+ IHRD++ N+L+ +D +I++FG++ + G T VG ++APE
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 234 HQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTID 292
+ V D K DI+SFG+ L G P + M + ++T +N +++
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAP----YHKYPPMKVL-----MLTLQNDPPSLE 243
Query: 293 SKLIGNGYEEQMLL------VLKIACFCTFDDPEERPNSKDV 328
+ G +++ +L K+ C DPE+RP + ++
Sbjct: 244 T-----GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 61 ELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLA 120
E+ GS + P K + + + + E M ++ EI Q H NIV
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 121 RVVRPDCDLLVYEFRRNGSLQDIL-YDVSQGRRELDWLARHRIA---RGIASGLEYLHMS 176
V D LV + GS+ DI+ + V++G + L IA R + GLEYLH +
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG---YIAPEC 233
+ IHRD++ N+L+ +D +I++FG++ + G T VG ++APE
Sbjct: 141 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 234 HQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTID 292
+ V D K DI+SFG+ L G P + M + ++T +N +++
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAP----YHKYPPMKVL-----MLTLQNDPPSLE 248
Query: 293 SKLIGNGYEEQMLL------VLKIACFCTFDDPEERPNSKDV 328
+ G +++ +L K+ C DPE+RP + ++
Sbjct: 249 T-----GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 70 ITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDL 129
+ IK + P + + E +K+ + E+ + Q+ H+NIV ++ DC
Sbjct: 39 VAIKAIFIPPREKEETLKR-----------FEREVHNSSQLSHQNIVSMIDVDEEDDCYY 87
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ +L + Y S G +D I G+++ +H RI+HRDI+P
Sbjct: 88 LVMEYIEGPTLSE--YIESHGPLSVDTAIN--FTNQILDGIKH---AHDMRIVHRDIKPQ 140
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFG 249
N+LID + +I +FG+AK + T L TV Y +PE + A + DIYS G
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG-TVQYFSPEQAKGEATDECTDIYSIG 199
Query: 250 VLLAVLMMGKFP 261
++L +++G+ P
Sbjct: 200 IVLYEMLVGEPP 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ EI RH +I+ L + P +V E+ G L D Y GR LD
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFD--YICKNGR--LDEKE 117
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R+ + I SG++Y HR ++HRD++P NVL+D M A+I++FGL+ + +G
Sbjct: 118 SRRLFQQILSGVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRX 174
Query: 219 TWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ + Y APE + + DI+S GV+L L+ G P DD
Sbjct: 175 SCG---SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ EI RH +I+ L + P +V E+ G L D Y GR E + A
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD--YICKHGRVE-EMEA 113
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R R+ + I S ++Y HR ++HRD++P NVL+D M A+I++FGL+ + +G T
Sbjct: 114 R-RLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169
Query: 219 TWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ + Y APE + + DI+S GV+L L+ G P DD
Sbjct: 170 SCG---SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
++++ EI +RH +I+ L + P ++V E+ G L D Y V + R D
Sbjct: 54 MRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFD--YIVEKKRMTED-- 108
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
R + I +EY HR +I+HRD++P N+L+DD++ +I++FGL+ + +G
Sbjct: 109 EGRRFFQQIICAIEY---CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165
Query: 218 TTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFF 266
T+ + Y APE + + + D++S G++L V+++G+ P DD F
Sbjct: 166 TSCG---SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ EI RH +I+ L + P +V E+ G L D Y GR E + A
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD--YICKHGRVE-EMEA 113
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R R+ + I S ++Y HR ++HRD++P NVL+D M A+I++FGL+ + +G
Sbjct: 114 R-RLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD 169
Query: 219 TWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ + Y APE + + DI+S GV+L L+ G P DD
Sbjct: 170 SCG---SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 109 QVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
Q+RH N+V LL +V L +V E+ GSL D L S+GR L + + +
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVC 118
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
+EYL ++ +HRD+ NVL+ +D A++S+FGL K+ +T + V
Sbjct: 119 EAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQDTGKLPVK 170
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ APE + A S K D++SFG+LL + G+ P
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
E + + ++ E ++H NI+ L ++ LV EF R G L +L S
Sbjct: 44 EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGK 100
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA--------RIS 202
R D L + IA G+ YLH IIHRD++ +N+LI +E +I+
Sbjct: 101 RIPPDILVNWAVQ--IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 203 EFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+FGLA++ RTT S A ++APE + S D++S+GVLL L+ G+ P
Sbjct: 159 DFGLARE----WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 34/242 (14%)
Query: 31 KEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDS 90
+E+L F + + LEK+ G VYKA+ S GR++ +K++ L +E E I +
Sbjct: 11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRI--RLDAEDEGIPSTA 66
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
EI ++ H NIV L+ + C LV+EF L+ +L + G
Sbjct: 67 ----------IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG 115
Query: 151 RRELDW-LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
++ + +++ RG+A H+ RI+HRD++P N+LI+ D ++++FGLA+
Sbjct: 116 LQDSQIKIYLYQLLRGVAH-------CHQHRILHRDLKPQNLLINSDGALKLADFGLARA 168
Query: 210 --IPNGRTRTTTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FP--S 262
IP R+ T + T+ Y AP+ + S DI+S G + A ++ GK FP +
Sbjct: 169 FGIP---VRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 263 DD 264
DD
Sbjct: 225 DD 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 34/242 (14%)
Query: 31 KEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDS 90
+E+L F + + LEK+ G VYKA+ S GR++ +K++ L +E E I +
Sbjct: 11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRI--RLDAEDEGIPSTA 66
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
EI ++ H NIV L+ + C LV+EF L+ +L + G
Sbjct: 67 ----------IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG 115
Query: 151 RRELDW-LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
++ + +++ RG+A H+ RI+HRD++P N+LI+ D ++++FGLA+
Sbjct: 116 LQDSQIKIYLYQLLRGVAH-------CHQHRILHRDLKPQNLLINSDGALKLADFGLARA 168
Query: 210 --IPNGRTRTTTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FP--S 262
IP R+ T + T+ Y AP+ + S DI+S G + A ++ GK FP +
Sbjct: 169 FGIP---VRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 263 DD 264
DD
Sbjct: 225 DD 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVYK L SSG+ + I+ LK+ + + E GQ H N
Sbjct: 58 GEVYKGMLKTSSGKK-EVPVAIKTLKAGYT---------EKQRVDFLGEAGIMGQFSHHN 107
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYL- 173
I+ L + + +++ E+ NG+L L + E L + RGIA+G++YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLA 164
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPE 232
+M++ +HRD+ N+L++ ++ ++S+FGL++ + + T T S + + + APE
Sbjct: 165 NMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 233 CHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQH 268
+ D++SFG+++ V+ G+ P + H
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 257
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 65 SSGRVITIKKVIQPLKSEAELIK-QDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
+G +K L E IK D L + +I++EI +RH++I L +
Sbjct: 19 GTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
+ +V E+ G L D Y +SQ R L + R I S + Y+H H
Sbjct: 79 TANKIFMVLEYCPGGELFD--YIISQDR--LSEEETRVVFRQIVSAVAYVHSQ---GYAH 131
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVA-LSDK 242
RD++P N+L D+ + ++ +FGL + P G + ++ Y APE Q + L +
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 243 CDIYSFGVLLAVLMMGKFPSDD 264
D++S G+LL VLM G P DD
Sbjct: 191 ADVWSMGILLYVLMCGFLPFDD 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 32 EDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSE 91
ED + E+ F LEK+ G VYKA + +G+++ IK+V
Sbjct: 20 EDSLTKQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAIKQV---------------- 62
Query: 92 PLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR 151
P+ + +I EI Q ++V + +V E+ GS+ DI+ ++
Sbjct: 63 PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL 122
Query: 152 RELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
E D +A I + GLEYLH R IHRDI+ N+L++ + A++++FG+A Q+
Sbjct: 123 TE-DEIAT--ILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
+ + + T ++APE Q + + DI+S G+ + GK P D
Sbjct: 177 DXMAKRN--XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 32 EDLAF--LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQD 89
E+L F + E+ F LEKI GEV+K + + +V+ IK + D
Sbjct: 16 ENLYFQSMDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------D 61
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
E ++ IQ EI Q + ++ ++ E+ GS D+L
Sbjct: 62 LEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--- 118
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
LD I R I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A Q
Sbjct: 119 --GPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQ 173
Query: 210 IPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
+ + + + T+ T ++APE + A K DI+S G+ L G+ P +
Sbjct: 174 LTDTQIKRNTF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 47/283 (16%)
Query: 67 GRVITIKKVIQPLKSEAELIKQDSE---PLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GR++ K V+ +KS LI DSE + K + Q E+ + H NIV L +
Sbjct: 38 GRLVKDKSVVA-IKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
P +V EF G L L D + + W + R+ IA G+EY+ + P I+H
Sbjct: 94 NPP--RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147
Query: 184 RDIQPANVLIDDDME-----ARISEFGLAKQIPN---GRTRTTTWSLAETVGYIAPECHQ 235
RD++ N+ + E A++++FGL++Q + G W ET+G +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG------AE 201
Query: 236 TVALSDKCDIYSFGVLLAVLMMGKFPSDDF-FQHTKEMSFV--QWMRNVMTSENPSRTID 292
+ ++K D YSF ++L ++ G+ P D++ + K ++ + + +R + + P R
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR--- 258
Query: 293 SKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
+ + C DP++RP+ + LS++
Sbjct: 259 --------------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKW 180
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L E+ F LEKI GEV+K + + +V+ IK + D E +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------DLEEAEDE 48
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
+ IQ EI Q + ++ ++ E+ GS D+L LD
Sbjct: 49 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDE 103
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
I R I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A Q+ + + +
Sbjct: 104 TQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 217 TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
T+ T ++APE + A K DI+S G+ L G+ P +
Sbjct: 161 RNTF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 123
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKW 179
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 109 QVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
Q+RH N+V LL +V L +V E+ GSL D L S+GR L + + +
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVC 127
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
+EYL ++ +HRD+ NVL+ +D A++S+FGL K+ +T + V
Sbjct: 128 EAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQDTGKLPVK 179
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ APE + S K D++SFG+LL + G+ P
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 123
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 179
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARH 160
+E Q+RH N+V LL +V L +V E+ GSL D L S+GR L
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 105
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL ++ +HRD+ NVL+ +D A++S+FGL K+ +T
Sbjct: 106 KFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQD 157
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ V + APE + S K D++SFG+LL + G+ P
Sbjct: 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 183
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 56 EVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNI 115
E+ K GS G+V ++KV +P DS L+ + ++ + +VR +
Sbjct: 31 ELLKVLGQGSFGKVFLVRKVTRP----------DSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 116 VPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARGI 166
+LA V P L Y F+ G L IL D +G L++ + +
Sbjct: 81 RDILADVNHPFVVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 167 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV 226
A GL++LH II+RD++P N+L+D++ ++++FGL+K+ + + +S TV
Sbjct: 140 ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFCGTV 194
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y+APE S D +S+GVL+ ++ G P
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E +++H N+V LL R ++ EF G+L D L + + R+E++ + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYM 121
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
A I+S +EYL + IHRD+ N L+ ++ ++++FGL++ + G T T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
+ + APE S K D+++FGVLL A M +P D Q
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 135
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 191
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 180
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 54 NGEVYKAELPGSSGRV------ITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITA 107
N ++ K GS G+V T +KV + ++ L K D + +I+ EI
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG------RIEREISYL 68
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
+RH +I+ L + D ++V E+ N L+D R ++ R + I
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 123
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
S +EY HR +I+HRD++P N+L+D+ + +I++FGL+ + +G T+ +
Sbjct: 124 SAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPN 177
Query: 228 YIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
Y APE + + D++S GV+L V++ + P DD
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 109 QVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
Q+RH N+V LL +V L +V E+ GSL D L S+GR L + + +
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVC 299
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
+EYL ++ +HRD+ NVL+ +D A++S+FGL K+ +T + V
Sbjct: 300 EAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKE-----ASSTQDTGKLPVK 351
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ APE + S K D++SFG+LL + G+ P
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 183
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E +++H N+V LL R ++ EF G+L D L + + R+E++ + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYM 121
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
A I+S +EYL + IHRD+ N L+ ++ ++++FGL++ + G T T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
+ + APE S K D+++FGVLL A M +P D Q
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E +++H N+V LL R ++ EF G+L D L + + R+E++ + +
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYM 120
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
A I+S +EYL + IHRD+ N L+ ++ ++++FGL++ + G T T
Sbjct: 121 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 176
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
+ + APE S K D+++FGVLL A M +P D Q
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E +++H N+V LL R ++ EF G+L D L + + R+E++ + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYM 116
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
A I+S +EYL + IHRD+ N L+ ++ ++++FGL++ + G T T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
+ + APE S K D+++FGVLL A M +P D Q
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 180
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 54 NGEVYKAELPGSSGRV------ITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITA 107
N ++ K GS G+V T +KV + ++ L K D + +I+ EI
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG------RIEREISYL 67
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
+RH +I+ L + D ++V E+ N L+D R ++ R + I
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 122
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
S +EY HR +I+HRD++P N+L+D+ + +I++FGL+ + +G T+ +
Sbjct: 123 SAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPN 176
Query: 228 YIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
Y APE + + D++S GV+L V++ + P DD
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 54 NGEVYKAELPGSSGRV------ITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITA 107
N ++ K GS G+V T +KV + ++ L K D + +I+ EI
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG------RIEREISYL 58
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
+RH +I+ L + D ++V E+ N L+D R ++ R + I
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 113
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
S +EY HR +I+HRD++P N+L+D+ + +I++FGL+ + +G T+ +
Sbjct: 114 SAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPN 167
Query: 228 YIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
Y APE + + D++S GV+L V++ + P DD
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G + L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-------FD 111
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 170
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 171 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL-ARHR 161
E+ +V H NIV L + P C LV E+ GSL Y+V G L + A H
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSL----YNVLHGAEPLPYYTAAHA 105
Query: 162 IARGI--ASGLEYLHMSHRPRIIHRDIQPANVL-IDDDMEARISEFGLAKQIPNGRTRTT 218
++ + + G+ YLH +IHRD++P N+L + +I +FG A I T
Sbjct: 106 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 165
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ ++APE + S+KCD++S+G++L ++ + P D+
Sbjct: 166 G-----SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 40 EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQ 99
E+ F L++I GEVYK + + V+ IK + D E ++
Sbjct: 18 EELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKII-------------DLEEAEDEIED 63
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
IQ EI Q I ++ ++ E+ GS D+L G E ++A
Sbjct: 64 IQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIAT 120
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTT 219
I R I GL+YLH R IHRDI+ ANVL+ + + ++++FG+A Q+ + + +
Sbjct: 121 --ILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX 175
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
+ T ++APE + A K DI+S G+ L G+ P+ D
Sbjct: 176 F--VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 54 NGEVYKAELPGSSGRV------ITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITA 107
N ++ K GS G+V T +KV + ++ L K D + +I+ EI
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG------RIEREISYL 62
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
+RH +I+ L + D ++V E+ N L+D R ++ R + I
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 117
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
S +EY HR +I+HRD++P N+L+D+ + +I++FGL+ + +G T+ +
Sbjct: 118 SAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPN 171
Query: 228 YIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
Y APE + + D++S GV+L V++ + P DD
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL-ARHR 161
E+ +V H NIV L + P C LV E+ GSL Y+V G L + A H
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSL----YNVLHGAEPLPYYTAAHA 104
Query: 162 IARGI--ASGLEYLHMSHRPRIIHRDIQPANVL-IDDDMEARISEFGLAKQIPNGRTRTT 218
++ + + G+ YLH +IHRD++P N+L + +I +FG A I T
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ ++APE + S+KCD++S+G++L ++ + P D+
Sbjct: 165 G-----SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 95 HKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRREL 154
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 59 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 114
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
R I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++
Sbjct: 115 TEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 171
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
R T L T YIAPE S + D++S G ++ L++GK P
Sbjct: 172 ERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 95 HKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRREL 154
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 59 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 114
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
R I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++
Sbjct: 115 TEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 171
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
R T L T YIAPE S + D++S G ++ L++GK P
Sbjct: 172 ERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 40 EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQ 99
E+ F LE+I GEV+K + + +V+ IK + D E ++
Sbjct: 22 EELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKII-------------DLEEAEDEIED 67
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
IQ EI Q + ++ ++ E+ GS D+L D
Sbjct: 68 IQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-----AGPFDEFQI 122
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTT 219
+ + I GL+YLH + IHRDI+ ANVL+ + + ++++FG+A Q+ + + + T
Sbjct: 123 ATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ T ++APE Q A K DI+S G+ L G+ P+ D
Sbjct: 180 F--VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 127
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 183
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 95 HKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRREL 154
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 63 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 118
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
R I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++
Sbjct: 119 TEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 175
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
R T L T YIAPE S + D++S G ++ L++GK P
Sbjct: 176 ERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 107
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTT 166
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L+ T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 167 ---LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 224 FTFPDFVTEGARDLISRLLKHNPSQRPML 252
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 168
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 165
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 166 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 110
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 169
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 170 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 226
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 227 FTFPDFVTEGARDLISRLLKHNPSQRPML 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 111
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 170
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 171 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 41 DCFASLEKIRSCWNGEVYKA-ELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQ 99
+ + + K+ S GEV E G S + I + K Q K ++ E H +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE---E 92
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I +EI + H NI+ L LV EF G L ++ R + D
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECDA 148
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD---MEARISEFGLAKQIPNGRTR 216
I + I SG+ YLH + I+HRDI+P N+L+++ + +I +FGL+
Sbjct: 149 ANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF------ 199
Query: 217 TTTWSLAETVG---YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + L + +G YIAPE + ++KCD++S GV++ +L+ G P
Sbjct: 200 SKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 106 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 165 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 221
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 222 FTFPDFVTEGARDLISRLLKHNPSQRPML 250
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 168
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 103
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 162
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 163 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 219
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 220 FTFPDFVTEGARDLISRLLKHNPSQRPML 248
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 132
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 191
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 192 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 249 FTFPDFVTEGARDLISRLLKHNPSQRPML 277
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 47/283 (16%)
Query: 67 GRVITIKKVIQPLKSEAELIKQDSE---PLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GR++ K V+ +KS LI DSE + K + Q E+ + H NIV L +
Sbjct: 38 GRLVKDKSVVA-IKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
P +V EF G L L D + + W + R+ IA G+EY+ + P I+H
Sbjct: 94 NPP--RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147
Query: 184 RDIQPANVLIDDDME-----ARISEFGLAKQIPN---GRTRTTTWSLAETVGYIAPECHQ 235
RD++ N+ + E A++++FG ++Q + G W ET+G +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIG------AE 201
Query: 236 TVALSDKCDIYSFGVLLAVLMMGKFPSDDF-FQHTKEMSFV--QWMRNVMTSENPSRTID 292
+ ++K D YSF ++L ++ G+ P D++ + K ++ + + +R + + P R
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR--- 258
Query: 293 SKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
+ + C DP++RP+ + LS++
Sbjct: 259 --------------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 123
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 124 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 182
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 183 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 239
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 240 FTFPDFVTEGARDLISRLLKHNPSQRPML 268
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 108
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I+ FG + P+ R RTT
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTT 167
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 168 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 225 FTFPDFVTEGARDLISRLLKHNPSQRPML 253
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDD 264
APE S K D+++FGVLL A M +P D
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ GSL+D L S G +L A+ I G+ YLH H IHRD+
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQH---YIHRDLAAR 163
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
NVL+D+D +I +FGLAK +P G ++ V + APEC + D++SF
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223
Query: 249 GVLLAVLM 256
GV L L+
Sbjct: 224 GVTLYELL 231
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDD 264
APE S K D+++FGVLL A M +P D
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 111
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RTT
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTT 170
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 171 ---LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 277 WMRNVMTSENPSRTIDSKLI 296
+ +E +R + S+L+
Sbjct: 228 FTFPDFVTEG-ARDLISRLL 246
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 99 QIQSEIITAGQVRHRNIVPLLA---RVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRREL 154
Q + E+ + ++H NI+ + R D DL L+ F GSL D L +
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK-----ANVV 118
Query: 155 DWLARHRIARGIASGLEYLHM-------SHRPRIIHRDIQPANVLIDDDMEARISEFGLA 207
W IA +A GL YLH H+P I HRDI+ NVL+ +++ A I++FGLA
Sbjct: 119 SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
Query: 208 KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD-----KCDIYSFGVLL 252
+ G++ T T Y+APE + + D+Y+ G++L
Sbjct: 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + L+ E+ G + D Y V+ GR + + AR + R I S
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMK-EKEARSKF-RQIVSA 123
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H+ RI+HRD++ N+L+D DM +I++FG + + G T + Y
Sbjct: 124 VQY---CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYA 177
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L E+ F LEKI GEV+K + + +V+ IK + D E +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------DLEEAEDE 48
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
+ IQ EI Q + ++ ++ E+ GS D+L LD
Sbjct: 49 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDE 103
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
I R I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A Q+ + + +
Sbjct: 104 TQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 217 TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
+ T ++APE + A K DI+S G+ L G+ P +
Sbjct: 161 RNXF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 9/168 (5%)
Query: 97 MIQ-IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELD 155
M+Q +Q+E+ Q++H +I+ L + LV E NG + L + + E +
Sbjct: 54 MVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE 113
Query: 156 WLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRT 215
ARH + + I +G+ YLH SH I+HRD+ +N+L+ +M +I++FGLA Q+
Sbjct: 114 --ARHFMHQ-IITGMLYLH-SHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD 263
+ ++L T YI+PE A + D++S G + L++G+ P D
Sbjct: 168 K--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I+ FG + P+ R RTT
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTT 168
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 47/283 (16%)
Query: 67 GRVITIKKVIQPLKSEAELIKQDSE---PLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GR++ K V+ +KS LI DSE + K + Q E+ + H NIV L +
Sbjct: 38 GRLVKDKSVVA-IKS---LILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
P +V EF G L L D + + W + R+ IA G+EY+ + P I+H
Sbjct: 94 NPP--RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQ-NQNPPIVH 147
Query: 184 RDIQPANVLIDDDME-----ARISEFGLAKQIPN---GRTRTTTWSLAETVGYIAPECHQ 235
RD++ N+ + E A++++F L++Q + G W ET+G +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIG------AE 201
Query: 236 TVALSDKCDIYSFGVLLAVLMMGKFPSDDF-FQHTKEMSFV--QWMRNVMTSENPSRTID 292
+ ++K D YSF ++L ++ G+ P D++ + K ++ + + +R + + P R
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR--- 258
Query: 293 SKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
+ + C DP++RP+ + LS++
Sbjct: 259 --------------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 47/251 (18%)
Query: 16 GSRDRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIK 73
GS DR PT F E+ L FL++ + F S+E R L ++G V+ +K
Sbjct: 1 GSEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVK 48
Query: 74 KV-------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPD 126
K+ ++ + E E++K H +++ + +AG+ RN+
Sbjct: 49 KLQHSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK---------- 92
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
L+ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 93 ---LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDL 143
Query: 187 QPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDI 245
N+L++++ +I +FGL K +P + E+ + + APE S D+
Sbjct: 144 ATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDV 203
Query: 246 YSFGVLLAVLM 256
+SFGV+L L
Sbjct: 204 WSFGVVLYELF 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 326
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHR++ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 327 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 382
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 424
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E++ + +A I+S
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 368
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHR++ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 369 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 424
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 466
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 107
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R T
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT- 166
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 167 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 224 FTFPDFVTEGARDLISRLLKHNPSQRPML 252
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDD 264
APE S K D+++FGVLL A M +P D
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 95 HKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRREL 154
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 57 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 112
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
R I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++
Sbjct: 113 TEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
R L T YIAPE S + D++S G ++ L++GK P
Sbjct: 170 ERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 112 HRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
E+LH + II+RD++P NVL+DDD RIS+ GLA ++ G+T+T + A T G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 231 PECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
PE D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 112 HRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
E+LH + II+RD++P NVL+DDD RIS+ GLA ++ G+T+T + A T G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 231 PECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
PE D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 112 HRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
E+LH + II+RD++P NVL+DDD RIS+ GLA ++ G+T+T + A T G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 231 PECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
PE D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 40 EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQ 99
E+ F LEKI GEV+K + + +V+ IK + D E ++
Sbjct: 21 EELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKII-------------DLEEAEDEIED 66
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
IQ EI Q + ++ ++ E+ GS D+L LD
Sbjct: 67 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQI 121
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTT 219
I R I GL+YLH + IHRDI+ ANVL+ + E ++++FG+A Q+ + + +
Sbjct: 122 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 178
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
+ T ++APE + A K DI+S G+ L G+ P +
Sbjct: 179 F--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSA 126
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H + I+HRD++ N+L+D DM +I++FG + + G T + Y
Sbjct: 127 VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYA 180
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 95 HKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRREL 154
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 81 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 136
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
R I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++
Sbjct: 137 TEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 193
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
R L T YIAPE S + D++S G ++ L++GK P
Sbjct: 194 ERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 112 HRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
H + LA DL LV G ++ +Y+V + I SGL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
E+LH + II+RD++P NVL+DDD RIS+ GLA ++ G+T+T + A T G++A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMA 357
Query: 231 PECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
PE D ++ GV L ++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 24/182 (13%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ S+
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASE 114
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ E+ L IAR A G++YLH IIHRD++ N+ + +D +I +FGLA
Sbjct: 115 TKFEMKKLID--IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA-- 167
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPEC---HQTVALSDKCDIYSFGVLLAVLMMGK 259
T + WS L+ ++ ++APE + S + D+Y+FG++L LM G+
Sbjct: 168 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 260 FP 261
P
Sbjct: 223 LP 224
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG----RRELDWLARHRIAR 164
+V R +V L D LV G L+ +Y + Q R + + A
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE----- 294
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
I GLE LH R RI++RD++P N+L+DD RIS+ GLA +P G+ T
Sbjct: 295 -ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVG 347
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
TVGY+APE + + D ++ G LL ++ G+ P FQ K+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP----FQQRKK 390
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG----RRELDWLARHRIAR 164
+V R +V L D LV G L+ +Y + Q R + + A
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE----- 294
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
I GLE LH R RI++RD++P N+L+DD RIS+ GLA +P G+ T
Sbjct: 295 -ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVG 347
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
TVGY+APE + + D ++ G LL ++ G+ P FQ K+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP----FQQRKK 390
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 95 HKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRREL 154
H+ ++ EI + H+++V D +V E R SL ++ + R+ L
Sbjct: 83 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKAL 138
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
R I G +YLH R R+IHRD++ N+ +++D+E +I +FGLA ++
Sbjct: 139 TEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
R L T YIAPE S + D++S G ++ L++GK P
Sbjct: 196 ERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 159 R---HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRT 215
R R A I L H R+IHRDI+P N+L+ + E +I++FG + P+ R
Sbjct: 108 RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR- 166
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMG--KFPSDDFFQHTKEMS 273
RTT L T+ Y+ PE + +K D++S GVL ++G F + + + + +S
Sbjct: 167 RTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 274 FVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLV 307
V++ +E +R + S+L+ + +++ L
Sbjct: 224 RVEFTFPDFVTEG-ARDLISRLLKHNASQRLTLA 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL R ++ EF G+L D L + + R+E+ + +A I+S
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 329
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHR++ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 330 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 385
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 427
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 85 LIKQDSEPLHHKMIQIQSEIIT-AGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQD- 142
LI+ ++ M ++ EI+ QV H N L+ +V + R G+ QD
Sbjct: 24 LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP-----FIIRMWGTFQDA 78
Query: 143 ----ILYDVSQGRRELDWLARHR-----IARGIAS----GLEYLHMSHRPRIIHRDIQPA 189
++ D +G L + + +A+ A+ LEYLH II+RD++P
Sbjct: 79 QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPE 135
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFG 249
N+L+D + +I++FG AK +P+ T+ L T YIAPE T + D +SFG
Sbjct: 136 NILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFG 190
Query: 250 VLLAVLMMGKFPSDD 264
+L+ ++ G P D
Sbjct: 191 ILIYEMLAGYTPFYD 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G + L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-------FD 111
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 170
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 171 ---LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RT
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RT- 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 165 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RT
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RT- 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 165 --ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ GSL+D L S G +L A+ I G+ YLH H IHR++
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQH---YIHRNLAAR 146
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
NVL+D+D +I +FGLAK +P G ++ V + APEC + D++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 249 GVLLAVLM 256
GV L L+
Sbjct: 207 GVTLYELL 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
++H +V L A V R + ++ E+ GSL D L G+ L L + IA G
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID--FSAQIAEG 122
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
+ Y+ R IHRD++ ANVL+ + + +I++FGLA+ I + T + +
Sbjct: 123 MAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWT 178
Query: 230 APECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
APE + K D++SFG+LL ++ GK P
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 107
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RT
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RT- 165
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 166 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 224 FTFPDFVTEGARDLISRLLKHNPSQRPML 252
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G VI K I + ++I + + E+ Q+ H NI+ L
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E G L +D R+ + RI R + SG+ Y+H + +I+H
Sbjct: 97 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 149
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC-HQTVAL 239
RD++P N+L++ D RI +FGL+ + T YIAPE H T
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG---TAYYIAPEVLHGT--Y 204
Query: 240 SDKCDIYSFGVLLAVLMMG 258
+KCD++S GV+L +L+ G
Sbjct: 205 DEKCDVWSTGVILYILLSG 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 164 RGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLA 223
R G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I R T L
Sbjct: 149 RQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LC 203
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T YIAPE S + DI+S G +L L++GK P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 49 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 104
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 105 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 162 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 218
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 219 W-KEKKTYLNPWKKIDS 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 69 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 127
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 128 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 180 -----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 257 MGKFP 261
G+ P
Sbjct: 232 TGQLP 236
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RT
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RT- 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 165 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 111
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RT
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RT- 169
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 170 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 228 FTFPDFVTEGARDLISRLLKHNPSQRPML 256
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R RT
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTX 165
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 166 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 99
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 100 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 151
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 152 -----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 257 MGKFPSDD 264
G+ P +
Sbjct: 204 TGQLPYSN 211
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G VI K I + ++I + + E+ Q+ H NI+ L
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E G L +D R+ + RI R + SG+ Y+H + +I+H
Sbjct: 103 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 155
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC-HQTVAL 239
RD++P N+L++ D RI +FGL+ + T YIAPE H T
Sbjct: 156 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG---TAYYIAPEVLHGT--Y 210
Query: 240 SDKCDIYSFGVLLAVLMMG 258
+KCD++S GV+L +L+ G
Sbjct: 211 DEKCDVWSTGVILYILLSG 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 61 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 119
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 120 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 171
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 172 -----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 223
Query: 257 MGKFP 261
G+ P
Sbjct: 224 TGQLP 228
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V R ++V E+ NGSL D G+ + L
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVG-- 155
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI---PNGRTRTT 218
+ RG+ +G+ YL +HRD+ NVL+D ++ ++S+FGL++ + P+ TT
Sbjct: 156 MLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + + APE S D++SFGV++ VL G+ P
Sbjct: 213 GGKIP--IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 24/182 (13%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ S+
Sbjct: 45 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASE 102
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ E+ L IAR A G++YLH IIHRD++ N+ + +D +I +FGLA
Sbjct: 103 TKFEMKKLID--IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA-- 155
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPEC---HQTVALSDKCDIYSFGVLLAVLMMGK 259
T + WS L+ ++ ++APE + S + D+Y+FG++L LM G+
Sbjct: 156 -----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
Query: 260 FP 261
P
Sbjct: 211 LP 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-- 167
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
+L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 168 --ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ GSL+D L S G +L A+ I G+ YLH H IHR++
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHSQH---YIHRNLAAR 146
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
NVL+D+D +I +FGLAK +P G ++ V + APEC + D++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 249 GVLLAVLM 256
GV L L+
Sbjct: 207 GVTLYELL 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-- 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
+L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 165 --ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSA 125
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H I+HRD++ N+L+D DM +I++FG + + G T + Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 108
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 167
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 168 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 225 FTFPDFVTEGARDLISRLLKHNPSQRPML 253
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSA 125
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H I+HRD++ N+L+D DM +I++FG + + G T + Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 126
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 127 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 182
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 229
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 230 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 105
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 106 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 163 LN-KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 219
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 220 W-KEKKTYLNPWKKIDS 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 223
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 224 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V R ++V E+ NGSL D G+ + L
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVG-- 155
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI---PNGRTRTT 218
+ RG+ +G+ YL +HRD+ NVL+D ++ ++S+FGL++ + P+ TT
Sbjct: 156 MLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + + APE S D++SFGV++ VL G+ P
Sbjct: 213 GGKIP--IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
I+ EI + H N+V + L E+ G L D + + G E D
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPD--- 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP-NGRTRT 217
R + +G+ YLH I HRDI+P N+L+D+ +IS+FGLA N R R
Sbjct: 107 AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 218 TTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
+ T+ Y+APE + ++ D++S G++L ++ G+ P D +E S
Sbjct: 164 LN-KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D 220
Query: 277 WMRNVMTSENPSRTIDS 293
W + T NP + IDS
Sbjct: 221 W-KEKKTYLNPWKKIDS 236
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H N++ L V + +++ EF NGSL L Q + +
Sbjct: 83 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVG 139
Query: 162 IARGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR---TRT 217
+ RGIA+G++YL M++ +HRD+ N+L++ ++ ++S+FGL++ + + T T
Sbjct: 140 MLRGIAAGMKYLADMNY----VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
+ + + APE Q + D++S+G+++ +M
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSA 125
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H I+HRD++ N+L+D DM +I++FG + + G T + Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 72 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 128
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 129 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 184
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 231
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 232 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 272
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 165
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 166 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 159 R---HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRT 215
R R A I L H R+IHRDI+P N+L+ + E +I++FG + P+ R
Sbjct: 108 RFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMG--KFPSDDFFQHTKEMS 273
T L T+ Y+ PE + +K D++S GVL ++G F + + + + +S
Sbjct: 168 DT----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 274 FVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLV 307
V++ +E +R + S+L+ + +++ L
Sbjct: 224 RVEFTFPDFVTEG-ARDLISRLLKHNASQRLTLA 256
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G VI K I + ++I + + E+ Q+ H NI+ L
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E G L +D R+ + RI R + SG+ Y+H + +I+H
Sbjct: 120 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 172
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC-HQTVAL 239
RD++P N+L++ D RI +FGL+ + T YIAPE H T
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG---TAYYIAPEVLHGT--Y 227
Query: 240 SDKCDIYSFGVLLAVLMMG 258
+KCD++S GV+L +L+ G
Sbjct: 228 DEKCDVWSTGVILYILLSG 246
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 73 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 129
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 130 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 185
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 232
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 233 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + L+ E+ G + D Y V+ GR + + AR + R I S
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMK-EKEARSKF-RQIVSA 126
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H+ RI+HRD++ N+L+D DM +I++FG + + G + Y
Sbjct: 127 VQY---CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD---AFCGAPPYA 180
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 222
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G VI K I + ++I + + E+ Q+ H NI+ L
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E G L +D R+ + RI R + SG+ Y+H + +I+H
Sbjct: 121 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 173
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC-HQTVAL 239
RD++P N+L++ D RI +FGL+ + T YIAPE H T
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG---TAYYIAPEVLHGT--Y 228
Query: 240 SDKCDIYSFGVLLAVLMMG 258
+KCD++S GV+L +L+ G
Sbjct: 229 DEKCDVWSTGVILYILLSG 247
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 65 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 121
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 122 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 177
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 224
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 225 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 66 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 123 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 225
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 226 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX- 168
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 169 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 93 LHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR 152
L K I++EI +++H NIV L P+ LV + G L D + V +G
Sbjct: 60 LKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI--VEKG-- 115
Query: 153 ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQ 209
+ + I L+ ++ HR I+HRD++P N+L D++ + IS+FGL+K
Sbjct: 116 ---FYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
Query: 210 IPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHT 269
G +T T GY+APE S D +S GV+ +L+ G P F+
Sbjct: 173 EGKGDVMSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP---FYDEN 226
Query: 270 KEMSFVQWMRNVMTSENP 287
F Q ++ ++P
Sbjct: 227 DSKLFEQILKAEYEFDSP 244
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 223
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 224 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + P +V ++ SL L+ S+
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-ASE 114
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ E+ L IAR A G++YLH IIHRD++ N+ + +D +I +FGLA
Sbjct: 115 TKFEMKKLID--IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA-- 167
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPEC---HQTVALSDKCDIYSFGVLLAVLMMGK 259
T + WS L+ ++ ++APE + S + D+Y+FG++L LM G+
Sbjct: 168 -----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 260 FP 261
P
Sbjct: 223 LP 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 223
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 224 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 46 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII-- 102
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 103 -ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 156
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 157 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 257 MGKFPSDD 264
G+ P +
Sbjct: 209 TGQLPYSN 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
+V E+ +L+DI++ ++G + R IA + L+ SH+ IIHRD++PA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 190 NVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N++I ++ +FG+A+ I + G + T T ++ T Y++PE + ++ + D+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 249 GVLLAVLMMGKFP----SDD--FFQHTKE 271
G +L ++ G+ P S D +QH +E
Sbjct: 206 GCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ EKI +G VY A + ++G+ + I+++ + + ELI +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 66
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
LE+LH + ++IHRDI+ N+L+ D ++++FG QI +++ +T +
Sbjct: 127 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--M 176
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE A K DI+S G++ ++ G+ P
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 74 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 130
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 131 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 186
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 233
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 234 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 274
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 43 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 101
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 102 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 153
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 154 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 205
Query: 257 MGKFPSDD 264
G+ P +
Sbjct: 206 TGQLPYSN 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 126
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 127 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 182
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 229
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 230 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 41/249 (16%)
Query: 15 GGSRDRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITI 72
G DR PT F E+ L FL++ + F S+E R L ++G V+ +
Sbjct: 2 GAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAV 49
Query: 73 KKVIQPLKSEAELIKQDSEPL----HHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCD 128
KK+ + +++ E L H +++ + +AG+ RN+
Sbjct: 50 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNLK------------ 94
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
L+ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 95 -LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLAT 147
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYS 247
N+L++++ +I +FGL K +P + E+ + + APE S D++S
Sbjct: 148 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWS 207
Query: 248 FGVLLAVLM 256
FGV+L L
Sbjct: 208 FGVVLYELF 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 69 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 126 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 228
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 229 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 99
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 100 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 151
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 152 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 257 MGKFPSDD 264
G+ P +
Sbjct: 204 TGQLPYSN 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 41/249 (16%)
Query: 15 GGSRDRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITI 72
G DR PT F E+ L FL++ + F S+E R L ++G V+ +
Sbjct: 4 GAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAV 51
Query: 73 KKVIQPLKSEAELIKQDSEPL----HHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCD 128
KK+ + +++ E L H +++ + +AG+ RN+
Sbjct: 52 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNLK------------ 96
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
L+ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 97 -LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLAT 149
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYS 247
N+L++++ +I +FGL K +P + E+ + + APE S D++S
Sbjct: 150 RNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWS 209
Query: 248 FGVLLAVLM 256
FGV+L L
Sbjct: 210 FGVVLYELF 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 68 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 126
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 127 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 178
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 179 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 230
Query: 257 MGKFP 261
G+ P
Sbjct: 231 TGQLP 235
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 69 KIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 30/185 (16%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 69 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 127
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 128 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 180 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 257 MGKFP 261
G+ P
Sbjct: 232 TGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + +P +V ++ SL L+ +
Sbjct: 46 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET 104
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 105 ---KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 156
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 157 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 257 MGKFPSDD 264
G+ P +
Sbjct: 209 TGQLPYSN 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
++H +V L A V + + ++ EF GSL D L G+ L L + IA G
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID--FSAQIAEG 121
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
+ Y+ R IHRD++ ANVL+ + + +I++FGLA+ I + T + +
Sbjct: 122 MAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWT 177
Query: 230 APECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
APE + K +++SFG+LL ++ GK P
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 120
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 121 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 176
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 223
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 224 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 109
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-- 167
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 168 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 226 FTFPDFVTEGARDLISRLLKHNPSQRPML 254
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSA 125
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG-- 227
++Y H I+HRD++ N+L+D DM +I++FG + + G L E G
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN------KLDEFCGSP 176
Query: 228 -YIAPECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
Y APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 59 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 115
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHRD++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 116 GMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKW 171
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 218
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 219 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
H + L PD V EF G D+++ + + RR + AR A I S L
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAE-IISAL 137
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYI 229
+LH II+RD++ NVL+D + ++++FG+ K+ I NG TT + T YI
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---VTTATFCGTPDYI 191
Query: 230 APECHQTVALSDKCDIYSFGVLLAVLMMGKFP-----SDDFFQH--TKEMSFVQWMRNVM 282
APE Q + D ++ GVLL ++ G P DD F+ E+ + W+
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDA 251
Query: 283 T-------SENPSRTIDS 293
T ++NP+ + S
Sbjct: 252 TGILKSFMTKNPTMRLGS 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-------FD 132
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H R+IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-- 190
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQ 276
L T+ Y+ PE + +K D++S GVL ++GK F ++ + + K +S V+
Sbjct: 191 --DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 249 FTFPDFVTEGARDLISRLLKHNPSQRPML 277
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR----IARGIASGLEYLHMSHRPR 180
P+C+ E NGS+ R LD++ R + I R I S L YLH
Sbjct: 143 PECN----EEAINGSIHGF-------RESLDFVQREKLISNIMRQIFSALHYLH---NQG 188
Query: 181 IIHRDIQPANVLI--DDDMEARISEFGLAKQ---IPNGRTRTTTWSLAETVGYIAPECHQ 235
I HRDI+P N L + E ++ +FGL+K+ + NG T + A T ++APE
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT-TKAGTPYFVAPEVLN 247
Query: 236 TV--ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDS 293
T + KCD +S GVLL +L+MG P F + Q + + ENP+ + S
Sbjct: 248 TTNESYGPKCDAWSAGVLLHLLLMGAVP---FPGVNDADTISQVLNKKLCFENPNYNVLS 304
Query: 294 KL 295
L
Sbjct: 305 PL 306
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
+++H N+V LL +V E+ G+L D L + + R E+ + +A I+S
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISS 141
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
+EYL + IHRD+ N L+ ++ ++++FGL++ + G T T + +
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 197
Query: 229 IAPECHQTVALSDKCDIYSFGVLL---AVLMMGKFPSDDFFQ 267
APE S K D+++FGVLL A M +P D Q
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 47/258 (18%)
Query: 9 ISAAVRGGSRDRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSS 66
A+ DR PT F E+ L FL++ + F S+E R L ++
Sbjct: 22 FQGAMGSAFEDRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNT 69
Query: 67 GRVITIKKV-------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLL 119
G V+ +KK+ ++ + E E++K H +++ + +AG+ RN+
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK--- 120
Query: 120 ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
L+ E+ GSL+D L + + +D + + I G+EYL
Sbjct: 121 ----------LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK--- 164
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVA 238
R IHRD+ N+L++++ +I +FGL K +P + E+ + + APE
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 239 LSDKCDIYSFGVLLAVLM 256
S D++SFGV+L L
Sbjct: 225 FSVASDVWSFGVVLYELF 242
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
+V E+ +L+DI++ ++G + R IA + L+ SH+ IIHRD++PA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 190 NVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N++I ++ +FG+A+ I + G + T T ++ T Y++PE + ++ + D+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 249 GVLLAVLMMGKFP-SDD-----FFQHTKE 271
G +L ++ G+ P + D +QH +E
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
+V E+ +L+DI++ ++G + R IA + L+ SH+ IIHRD++PA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 190 NVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N++I ++ +FG+A+ I + G + T T ++ T Y++PE + ++ + D+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 249 GVLLAVLMMGKFP-SDD-----FFQHTKE 271
G +L ++ G+ P + D +QH +E
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
+V E+ +L+DI++ ++G + R IA + L+ SH+ IIHRD++PA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 190 NVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N++I ++ +FG+A+ I + G + T T ++ T Y++PE + ++ + D+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 249 GVLLAVLMMGKFP-SDD-----FFQHTKE 271
G +L ++ G+ P + D +QH +E
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 164 RGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLA 223
R G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I R L
Sbjct: 133 RQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK--DLC 187
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T YIAPE S + DI+S G +L L++GK P
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ GSL+D L G +L A+ I G+ YLH H IHR +
Sbjct: 89 LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQH---YIHRALAAR 140
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
NVL+D+D +I +FGLAK +P G ++ V + APEC + D++SF
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 200
Query: 249 GVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMT 283
GV L L+ + + HTK + + MT
Sbjct: 201 GVTLYELLT--YCDSNQSPHTKFTELIGHTQGQMT 233
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 58 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 114
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 115 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 170
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 230
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 231 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 258
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ GSL+D L G +L A+ I G+ YLH H IHR +
Sbjct: 90 LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQH---YIHRALAAR 141
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
NVL+D+D +I +FGLAK +P G ++ V + APEC + D++SF
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 201
Query: 249 GVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMT 283
GV L L+ + + HTK + + MT
Sbjct: 202 GVTLYELLT--YCDSNQSPHTKFTELIGHTQGQMT 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
+V E+ +L+DI++ ++G + R IA + L+ SH+ IIHRD++PA
Sbjct: 110 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 162
Query: 190 NVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N++I ++ +FG+A+ I + G + T T ++ T Y++PE + ++ + D+YS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 249 GVLLAVLMMGKFP-SDD-----FFQHTKE 271
G +L ++ G+ P + D +QH +E
Sbjct: 223 GCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G V+ K + + ++IK+ S + E+ Q+ H NI+ L
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E R G L D + + Q E+D I + + SG YLH + I+H
Sbjct: 75 DKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV---IMKQVLSGTTYLH---KHNIVH 127
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALS 240
RD++P N+L++ D +I +FGL+ G T YIAPE +
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG---TAYYIAPEVLRK-KYD 183
Query: 241 DKCDIYSFGVLLAVLMMGKFP 261
+KCD++S GV+L +L+ G P
Sbjct: 184 EKCDVWSCGVILYILLCGYPP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 60 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 116
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 117 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 172
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 232
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 233 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 260
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G VI K I + ++I + + E+ Q+ H NI L
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E G L +D R+ + RI R + SG+ Y H+ +I+H
Sbjct: 97 DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITY---XHKNKIVH 149
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC-HQTVAL 239
RD++P N+L++ D RI +FGL+ + T YIAPE H T
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIG---TAYYIAPEVLHGT--Y 204
Query: 240 SDKCDIYSFGVLLAVLMMG 258
+KCD++S GV+L +L+ G
Sbjct: 205 DEKCDVWSTGVILYILLSG 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 26/234 (11%)
Query: 31 KEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDS 90
+E+L F D + ++K+ S G+ G V+ K + + ++IK+ S
Sbjct: 11 RENLYFQGLSDRYQRVKKLGS------------GAYGEVLLCKDKLTGAERAIKIIKKSS 58
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
+ E+ Q+ H NI+ L LV E R G L D + + Q
Sbjct: 59 VTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQK 117
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD---DMEARISEFGLA 207
E+D I + + SG YLH + I+HRD++P N+L++ D +I +FGL+
Sbjct: 118 FSEVDAAV---IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Query: 208 KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
G T YIAPE + +KCD++S GV+L +L+ G P
Sbjct: 172 AHFEVGGKMKERLG---TAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 164 RGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLA 223
R G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I R L
Sbjct: 149 RQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK--DLC 203
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T YIAPE S + DI+S G +L L++GK P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L + L L +A IAS
Sbjct: 59 KLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 115
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 116 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKW 171
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 231
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C +PEERP + ++ L
Sbjct: 232 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 259
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 164 RGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLA 223
R G++YLH + R+IHRD++ N+ ++DDM+ +I +FGLA +I R L
Sbjct: 149 RQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK--XLC 203
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T YIAPE S + DI+S G +L L++GK P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD+ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL----ARHRIARG 165
+ H NIV L + LV E+ G + D L V+ G W+ AR + R
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG-----WMKEKEARAKF-RQ 114
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S ++Y H I+HRD++ N+L+D DM +I++FG + + G T +
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGS 168
Query: 226 VGYIAPECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
Y APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMK-EKEARAKF-RQIVSA 125
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H I+HRD++ N+L+D DM +I++FG + + G + Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---AFCGAPPYA 179
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L + L L +A IAS
Sbjct: 62 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 118
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 119 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 174
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 234
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C +PEERP + ++ L
Sbjct: 235 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 262
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIARGIASGL 170
H NI+ L LV++ + G L D L + V+ +E +I R + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-----TRKIMRAL---L 134
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAETVGYI 229
E + H+ I+HRD++P N+L+DDDM ++++FG + Q+ P + R S+ T Y+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----SVCGTPSYL 190
Query: 230 APECHQTV------ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE + + D++S GV++ L+ G P F H K+M
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQM 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIARGIASGL 170
H +I+ L+ LV++ R G L D L + V+ +E I R + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET-----RSIMRSLLEAV 213
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAETVGYI 229
+LH ++ I+HRD++P N+L+DD+M+ R+S+FG + + P + R L T GY+
Sbjct: 214 SFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGTPGYL 266
Query: 230 APECHQTV------ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE + + D+++ GV+L L+ G P F H +++
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP----FWHRRQI 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 19 DRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV- 75
DR PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 7 DRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQ 54
Query: 76 ------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDL 129
++ + E E++K H +++ + +AG+ RN+
Sbjct: 55 HSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK------------- 95
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
L+ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 96 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATR 149
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++++ +I +FGL K +P + E+ + + APE S D++SF
Sbjct: 150 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 209
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 210 GVVLYELF 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
+ P ++ ++E+ + RH NI+ + P +V ++ SL L+ +
Sbjct: 41 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHII-- 97
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ + + IAR A G++YLH IIHRD++ N+ + +D+ +I +FGLA
Sbjct: 98 -ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 151
Query: 210 IPNGRTRTTTWS-------LAETVGYIAPECHQTVALSDK------CDIYSFGVLLAVLM 256
T + WS L+ ++ ++APE + + DK D+Y+FG++L LM
Sbjct: 152 -----TVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 257 MGKFPSDD 264
G+ P +
Sbjct: 204 TGQLPYSN 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ E+ +RH NI+ L L+ E+ G++ L +S+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-------FD 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A I L H ++IHRDI+P N+L+ E +I++FG + P+ R
Sbjct: 107 EQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-- 164
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD-DFFQHT-KEMSFVQ 276
+L T+ Y+ PE + +K D++S GVL ++GK P + + +Q T K +S V+
Sbjct: 165 --ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVE 222
Query: 277 WMRNVMTSENPSRTIDSKLIGNGYEEQML 305
+ +E I L N + ML
Sbjct: 223 FTFPDFVTEGARDLISRLLKHNPSQRPML 251
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 19 DRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV- 75
DR PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 4 DRDPTQF----EERHLKFLRQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQ 51
Query: 76 ------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDL 129
++ + E E++K H +++ + +AG+ RN+
Sbjct: 52 HSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK------------- 92
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
L+ EF GSL++ L + + +D + + I G+EYL R IHRD+
Sbjct: 93 LIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATR 146
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++++ +I +FGL K +P + E+ + + APE S D++SF
Sbjct: 147 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 207 GVVLYELF 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 19 DRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV- 75
DR PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 5 DRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQ 52
Query: 76 ------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDL 129
++ + E E++K H +++ + +AG+ RN+
Sbjct: 53 HSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK------------- 93
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
L+ E+ GSL+D L + + +D + + I G+EYL R IHRD+
Sbjct: 94 LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATR 147
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++++ +I +FGL K +P + E+ + + APE S D++SF
Sbjct: 148 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 207
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 208 GVVLYELF 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEV+ G++ I K ++P E Q+++ + ++RH
Sbjct: 198 GEVWMGTWNGTTRVAI---KTLKPGTMSPEAFLQEAQVMK--------------KLRHEK 240
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V L A VV + +V E+ GSL D L + L L +A IASG+ Y+
Sbjct: 241 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE 297
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
R +HRD++ AN+L+ +++ ++++FGLA+ I + T + + APE
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA 353
Query: 235 QTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDS 293
+ K D++SFG+LL L G+ P + R E P D
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD- 412
Query: 294 KLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
+ C C +PEERP + ++ L
Sbjct: 413 ----------------LMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEV+ G++ I K ++P E Q+++ + ++RH
Sbjct: 198 GEVWMGTWNGTTRVAI---KTLKPGTMSPEAFLQEAQVMK--------------KLRHEK 240
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V L A VV + +V E+ GSL D L + L L +A IASG+ Y+
Sbjct: 241 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE 297
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
R +HRD++ AN+L+ +++ ++++FGLA+ I + T + + APE
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA 353
Query: 235 QTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDS 293
+ K D++SFG+LL L G+ P + R E P D
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD- 412
Query: 294 KLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
+ C C +PEERP + ++ L
Sbjct: 413 ----------------LMCQCWRKEPEERPTFEYLQAFL 435
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ EKI +G VY A + ++G+ + I+++ + + ELI +
Sbjct: 23 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 67
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
LE+LH + ++IHR+I+ N+L+ D ++++FG QI +++ +T +
Sbjct: 128 -----QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--M 177
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE A K DI+S G++ ++ G+ P
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 46/322 (14%)
Query: 27 PLIEKEDLAFLKKEDCFAS--LEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE 84
PLI + A LK+ A +E++ G+VYK L G + T I+ LK +AE
Sbjct: 10 PLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 85 LIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL 144
PL + + E + +++H N+V LL V + +++ + +G L + L
Sbjct: 70 ------GPLRE---EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
Query: 145 YDVSQ----GRRELDWLAR---------HRIARGIASGLEYLHMSHRPRIIHRDIQPANV 191
S G + D + H +A+ IA+G+EYL H ++H+D+ NV
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ-IAAGMEYLSSHH---VVHKDLATRNV 176
Query: 192 LIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVL 251
L+ D + +IS+ GL +++ + + ++APE S DI+S+GV+
Sbjct: 177 LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 236
Query: 252 L-AVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKI 310
L V G P + V+ +RN P + L I
Sbjct: 237 LWEVFSYGLQPYCGY----SNQDVVEMIRNRQVLPCPDDC-----------PAWVYALMI 281
Query: 311 ACFCTFDDPEERPNSKDVRCML 332
C+ F P RP KD+ L
Sbjct: 282 ECWNEF--PSRRPRFKDIHSRL 301
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q++H+ +V L A VV + ++ E+ NGSL D L S + ++ L +A IA
Sbjct: 60 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD--MAAQIAE 116
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ ++ + IHR+++ AN+L+ D + +I++FGLA+ I + T + +
Sbjct: 117 GMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKW 172
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA-VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL ++ G+ P M N +N
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------MTNPEVIQNL 219
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
R N EE + ++ C + PE+RP +R +L
Sbjct: 220 ERGYRMVRPDNCPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L + L L +A IAS
Sbjct: 318 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 374
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 375 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKW 430
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 490
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C +PEERP + ++ L
Sbjct: 491 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 518
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ EKI +G VY A + ++G+ + I+++ + + ELI +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 66
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
LE+LH + ++IHRDI+ N+L+ D ++++FG QI +++ + +
Sbjct: 127 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--EM 176
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE A K DI+S G++ ++ G+ P
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
+V E+ +L+DI++ ++G + R IA + L+ SH+ IIHRD++PA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 190 NVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N+LI ++ +FG+A+ I + G + T ++ T Y++PE + ++ + D+YS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 249 GVLLAVLMMGKFP-SDD-----FFQHTKE 271
G +L ++ G+ P + D +QH +E
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEV+ G++ I K ++P E Q+++ + ++RH
Sbjct: 198 GEVWMGTWNGTTRVAI---KTLKPGTMSPEAFLQEAQVMK--------------KLRHEK 240
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V L A VV + +V E+ GSL D L + L L +A IASG+ Y+
Sbjct: 241 LVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIASGMAYVE 297
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
R +HRD++ AN+L+ +++ ++++FGLA+ I + T + + APE
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA 353
Query: 235 QTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDS 293
+ K D++SFG+LL L G+ P + R E P D
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD- 412
Query: 294 KLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
+ C C +PEERP + ++ L
Sbjct: 413 ----------------LMCQCWRKEPEERPTFEYLQAFL 435
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 39/254 (15%)
Query: 84 ELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI 143
ELI+ D E E+ + H N++ + + + + E+ + G+L+ I
Sbjct: 42 ELIRFDEETQR----TFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI 97
Query: 144 LYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 203
+ + + W R A+ IASG+ YLH + IIHRD+ N L+ ++ +++
Sbjct: 98 IKSMDS---QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVAD 151
Query: 204 FGLAKQIPNGRT------------RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVL 251
FGLA+ + + +T R +++ ++APE + +K D++SFG++
Sbjct: 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
Query: 252 LAVLMMGKFPSD-DFFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKI 310
L + +G+ +D D+ T M F +R + P S I
Sbjct: 212 LCEI-IGRVNADPDYLPRT--MDFGLNVRGFLDRYCPPNCPPS-------------FFPI 255
Query: 311 ACFCTFDDPEERPN 324
C DPE+RP+
Sbjct: 256 TVRCCDLDPEKRPS 269
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ EKI +G VY A + ++G+ + I+++ + + ELI +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 66
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
LE+LH + ++IHRDI+ N+L+ D ++++FG QI +++ + +
Sbjct: 127 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--XM 176
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE A K DI+S G++ ++ G+ P
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 48 KIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITA 107
+I S G VYK + G + I KV+ P + + + +E+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVA--VKILKVVDPTPEQFQAFR--------------NEVAVL 86
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
+ RH NI+ + + + D +V ++ SL L+ V + + ++ L IAR A
Sbjct: 87 RKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLH-VQETKFQMFQLID--IARQTA 142
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE--- 224
G++YLH + IIHRD++ N+ + + + +I +FGLA T + WS ++
Sbjct: 143 QGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLA-------TVKSRWSGSQQVE 192
Query: 225 ----TVGYIAPEC---HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+V ++APE S + D+YS+G++L LM G+ P
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ EKI +G VY A + ++G+ + I+++ + + ELI +
Sbjct: 23 YTRFEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELII--------------N 67
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI+ + ++ NIV L + D +V E+ GSL D++ + ++ + R +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
LE+LH + ++IHRDI+ N+L+ D ++++FG QI +++ + +
Sbjct: 128 -----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--XM 177
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE A K DI+S G++ ++ G+ P
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 14/162 (8%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H N+V L V R ++V EF NG+L D G+ + L + RGIA
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVG--MLRGIA 155
Query: 168 SGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI---PNGRTRTTTWSLA 223
+G+ YL M + +HRD+ N+L++ ++ ++S+FGL++ I P TT +
Sbjct: 156 AGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + APE Q + D++S+G+++ V+ G+ P D
Sbjct: 212 --VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L + L L ++ IAS
Sbjct: 66 KLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIAS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 238
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C +PEERP + ++ L
Sbjct: 239 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 42/279 (15%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEV+ G++ I K ++P E Q+++ + ++RH
Sbjct: 199 GEVWMGTWNGTTRVAI---KTLKPGNMSPEAFLQEAQVMK--------------KLRHEK 241
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+V L A VV + +V E+ GSL D L L L +A IASG+ Y+
Sbjct: 242 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIASGMAYVE 298
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
R +HRD++ AN+L+ +++ ++++FGL + I + T + + APE
Sbjct: 299 ---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAA 354
Query: 235 QTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDS 293
+ K D++SFG+LL L G+ P + R E P D
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD- 413
Query: 294 KLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
+ C C DPEERP + ++ L
Sbjct: 414 ----------------LMCQCWRKDPEERPTFEYLQAFL 436
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 45 SLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI 104
SL+ I+ NG+ + + +G K ++P E ++++ +
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMK---------- 59
Query: 105 ITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAR 164
+++H +V L A VV + +V E+ GSL D L D +GR L +A
Sbjct: 60 ----KLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKD-GEGR-ALKLPNLVDMAA 112
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A+G+ Y+ R IHRD++ AN+L+ + + +I++FGLA+ I + T
Sbjct: 113 QVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-TARQGAKF 168
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFP 261
+ + APE + K D++SFG+LL L+ G+ P
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 58/292 (19%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRH----------- 112
G+ G+V+ + + + I+ E K+ I SE++ + H
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEE----KLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 113 --RNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY--DVSQGRRELDWLARHRIARGIAS 168
RN V + V + + E+ NG+L D+++ +++Q R E W R+ R I
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-W----RLFRQILE 127
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPN-------------GRT 215
L Y+H IIHRD++P N+ ID+ +I +FGLAK + G +
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 216 RTTTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
T ++ T Y+A E T ++K D+YS G++ ++ +P F + ++
Sbjct: 185 DNLTSAIG-TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YP---FSTGMERVNI 237
Query: 275 VQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSK 326
++ +R+V + E P D+K M + KI DP +RP ++
Sbjct: 238 LKKLRSV-SIEFPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ G L D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ GSL D L + L L ++ IAS
Sbjct: 66 KLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIAS 122
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-TARQGAKFPIKW 178
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 238
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C +PEERP + ++ L
Sbjct: 239 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H N++ L V + +++ EF NGSL L Q + +
Sbjct: 57 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVG 113
Query: 162 IARGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR---TRT 217
+ RGIA+G++YL M++ +HR + N+L++ ++ ++S+FGL++ + + T T
Sbjct: 114 MLRGIAAGMKYLADMNY----VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
+ + + APE Q + D++S+G+++ V+ G+ P D
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G+VYK L G + T I+ LK +AE PL + + E + +++H N
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAE------GPLRE---EFRHEAMLRARLQHPN 73
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ----GRRELDWLAR---------HR 161
+V LL V + +++ + +G L + L S G + D + H
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+A+ IA+G+EYL H ++H+D+ NVL+ D + +IS+ GL +++ +
Sbjct: 134 VAQ-IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 222 LAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQWMRN 280
+ ++APE S DI+S+GV+L V G P + V+ +RN
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP----YCGYSNQDVVEMIRN 245
Query: 281 VMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
P + L I C+ F P RP KD+ L
Sbjct: 246 RQVLPCPDDC-----------PAWVYALMIECWNEF--PSRRPRFKDIHSRL 284
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 24/169 (14%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIARGIASGL 170
H NI+ L LV++ + G L D L + V+ +E +I R + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-----TRKIMRAL---L 121
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAETVGYI 229
E + H+ I+HRD++P N+L+DDDM ++++FG + Q+ P + R + T Y+
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYL 177
Query: 230 APECHQTV------ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE + + D++S GV++ L+ G P F H K+M
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQM 222
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 25/225 (11%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
++RH +V L A VV + +V E+ G L D L L L +A IAS
Sbjct: 69 KLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+ Y+ R +HRD++ AN+L+ +++ ++++FGLA+ I + T + +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKW 181
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMM-GKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
APE + K D++SFG+LL L G+ P + R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCML 332
D + C C DPEERP + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V +++ EF NG+L L ++ G+ + L
Sbjct: 64 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVG-- 120
Query: 162 IARGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTT 219
+ RGIASG+ YL MS+ +HRD+ N+L++ ++ ++S+FGL++ + N T T
Sbjct: 121 MLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 220 WSLAETVG--YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
SL + + APE + D +S+G+++ V+ G+ P D
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V +++ EF NG+L L ++ G+ + L
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVG-- 122
Query: 162 IARGIASGLEYL-HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTT 219
+ RGIASG+ YL MS+ +HRD+ N+L++ ++ ++S+FGL++ + N T T
Sbjct: 123 MLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 220 WSLAETVG--YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
SL + + APE + D +S+G+++ V+ G+ P D
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 24/169 (14%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYD-VSQGRRELDWLARHRIARGIASGL 170
H NI+ L LV++ + G L D L + V+ +E +I R + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-----TRKIMRAL---L 134
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAETVGYI 229
E + H+ I+HRD++P N+L+DDDM ++++FG + Q+ P + R + T Y+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYL 190
Query: 230 APECHQTV------ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE + + D++S GV++ L+ G P F H K+M
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQM 235
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQD-ILYDVSQGRRELDWLARHRIARGIASG 169
+H NI+ L LV E R G L D IL RE ++ H I + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-HTIGKTV--- 134
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEA----RISEFGLAKQI--PNGRTRTTTWSLA 223
EYLH ++HRD++P+N+L D+ RI +FG AKQ+ NG T +
Sbjct: 135 -EYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--- 187
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE + + CDI+S G+LL ++ G P
Sbjct: 188 -TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 47/248 (18%)
Query: 19 DRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV- 75
DR PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 4 DRDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQ 51
Query: 76 ------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDL 129
++ + E E++K H +++ + +AG+ RN+
Sbjct: 52 HSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK------------- 92
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
L+ E+ GSL+D L ++ +D + + I G+EYL R IHRD+
Sbjct: 93 LIMEYLPYGSLRDYLQAHAE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATR 146
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++++ +I +FGL K +P + E+ + + APE S D++SF
Sbjct: 147 NILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 207 GVVLYELF 214
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 56 EVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNI 115
E+ K GS G+V +KK+ D+ L+ + ++ + +VR +
Sbjct: 27 ELLKVLGQGSFGKVFLVKKISG----------SDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 116 VPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARGI 166
+L V P L Y F+ G L IL D +G L++ + +
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 167 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV 226
A L++LH II+RD++P N+L+D++ ++++FGL+K+ + + +S TV
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTV 190
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y+APE + D +SFGVL+ ++ G P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 56 EVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNI 115
E+ K GS G+V +KK+ D+ L+ + ++ + +VR +
Sbjct: 27 ELLKVLGQGSFGKVFLVKKISG----------SDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 116 VPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARGI 166
+L V P L Y F+ G L IL D +G L++ + +
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 167 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV 226
A L++LH II+RD++P N+L+D++ ++++FGL+K+ + + +S TV
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTV 190
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y+APE + D +SFGVL+ ++ G P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
+ H NIV L + LV E+ G + D L V+ GR + + AR + R I S
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL--VAHGRXK-EKEARAKF-RQIVSA 125
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
++Y H I+HRD++ N+L+D D +I++FG + + G + Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD---AFCGAPPYA 179
Query: 230 APECHQTVALSD-KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
APE Q + D++S GV+L L+ G P D Q+ KE+
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKEL 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 56 EVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNI 115
E+ K GS G+V +KK+ D+ L+ + ++ + +VR +
Sbjct: 28 ELLKVLGQGSFGKVFLVKKISG----------SDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 116 VPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARGI 166
+L V P L Y F+ G L IL D +G L++ + +
Sbjct: 78 RDILVEVNHPFIVKLHYAFQTEGKLYLIL-DFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 167 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV 226
A L++LH II+RD++P N+L+D++ ++++FGL+K+ + + +S TV
Sbjct: 137 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTV 191
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y+APE + D +SFGVL+ ++ G P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 41/244 (16%)
Query: 20 RGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQ 77
R PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 2 RDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQH 49
Query: 78 PLKSEAELIKQDSEPL----HHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYE 133
+ +++ E L H +++ + +AG+ RN+ L+ E
Sbjct: 50 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNLK-------------LIME 93
Query: 134 FRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLI 193
+ GSL+D L + + +D + + I G+EYL R IHRD+ N+L+
Sbjct: 94 YLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILV 147
Query: 194 DDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL 252
+++ +I +FGL K +P + E+ + + APE S D++SFGV+L
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 253 AVLM 256
L
Sbjct: 208 YELF 211
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQD-ILYDVSQGRRELDWLARHRIARGIASG 169
+H NI+ L LV E R G L D IL RE ++ H I + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-HTIGKTV--- 134
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEA----RISEFGLAKQI--PNGRTRTTTWSLA 223
EYLH ++HRD++P+N+L D+ RI +FG AKQ+ NG T +
Sbjct: 135 -EYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--- 187
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T ++APE + + CDI+S G+LL ++ G P
Sbjct: 188 -TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 49/251 (19%)
Query: 16 GSRDRGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIK 73
GSRD PT F E+ L FL++ + F S+E R L ++G V+ +K
Sbjct: 1 GSRD--PTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVK 46
Query: 74 KV-------IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPD 126
K+ ++ + E E++K H +++ + +AG+ RN+
Sbjct: 47 KLQHSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK---------- 90
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
L+ E+ GSL+D L + + +D + + I G+EYL R IHR++
Sbjct: 91 ---LIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNL 141
Query: 187 QPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDI 245
N+L++++ +I +FGL K +P + E+ + + APE S D+
Sbjct: 142 ATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDV 201
Query: 246 YSFGVLLAVLM 256
+SFGV+L L
Sbjct: 202 WSFGVVLYELF 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 47/247 (19%)
Query: 20 RGPTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV-- 75
R PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 1 RDPTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQH 48
Query: 76 -----IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLL 130
++ + E E++K H +++ + +AG+ RN+ L
Sbjct: 49 STEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK-------------L 89
Query: 131 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPAN 190
+ E+ GSL+D L + + +D + + I G+EYL R IHRD+ N
Sbjct: 90 IMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRN 143
Query: 191 VLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFG 249
+L++++ +I +FGL K +P + E+ + + APE S D++SFG
Sbjct: 144 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 203
Query: 250 VLLAVLM 256
V+L L
Sbjct: 204 VVLYELF 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 28 LIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIK 87
L +K+ + LK +D F + ++ + G V+K SG V+ K LI
Sbjct: 13 LTQKQKVGELKDDD-FEKISELGAGNGGVVFKVSHK-PSGLVMARK-----------LIH 59
Query: 88 QDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR---VVRPDCDL-LVYEFRRNGSLQDI 143
+ +P I+++II QV H P + D ++ + E GSL +
Sbjct: 60 LEIKP------AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 113
Query: 144 LYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 203
L GR L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +
Sbjct: 114 LKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCD 167
Query: 204 FGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD 263
FG++ Q+ + + S T Y++PE Q S + DI+S G+ L + +G++P
Sbjct: 168 FGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
Query: 264 DFFQHTKEMSFVQWMRNVMTSENPSRT--------IDSKLIGNGYEEQMLLVLKIACFCT 315
+ ++ N + PS ++ LI N E L L + F
Sbjct: 224 SGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
Query: 316 FDDPEE 321
D EE
Sbjct: 284 RSDAEE 289
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V + +++ E+ NGSL D + GR + L
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVG-- 114
Query: 162 IARGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTT 219
+ RGI SG++YL MS+ +HRD+ N+L++ ++ ++S+FG+++ + + TT
Sbjct: 115 MLRGIGSGMKYLSDMSY----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
+ + APE + D++S+G+++ V+ G+ P D
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGLA+ + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V + +++ E+ NGSL D + GR + L
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVG-- 120
Query: 162 IARGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTT 219
+ RGI SG++YL MS+ +HRD+ N+L++ ++ ++S+FG+++ + + TT
Sbjct: 121 MLRGIGSGMKYLSDMSY----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
+ + APE + D++S+G+++ V+ G+ P D
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW LA T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV- 123
S G+++ K++ +EAE KQ + SE+ +++H NIV R++
Sbjct: 29 SDGKILVWKELDYGSMTEAE--KQ----------MLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 124 RPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR-- 180
R + L +V E+ G L + +++G +E +L + R + L HR
Sbjct: 77 RTNTTLYIVMEYCEGGDLASV---ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 181 ---IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTV 237
++HRD++PANV +D ++ +FGLA+ + + + T+ T Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF--VGTPYYMSPEQMNRM 191
Query: 238 ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ ++K DI+S G LL L P F Q
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G V+ K I + ++I + S + I E+ ++ H NI+ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
+V E G L +D R+ RI + + SG+ Y+H + I+H
Sbjct: 92 DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALS 240
RD++P N+L++ D + +I +FGL+ + T T YIAPE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 241 DKCDIYSFGVLLAVLMMGKFP 261
+KCD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G V+ K I + ++I + S + I E+ ++ H NI+ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
+V E G L +D R+ RI + + SG+ Y+H + I+H
Sbjct: 92 DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALS 240
RD++P N+L++ D + +I +FGL+ + T T YIAPE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRGT-YD 200
Query: 241 DKCDIYSFGVLLAVLMMGKFP 261
+KCD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
GS G V+ K I + ++I + S + I E+ ++ H NI+ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
+V E G L +D R+ RI + + SG+ Y+H + I+H
Sbjct: 92 DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALS 240
RD++P N+L++ D + +I +FGL+ + T T YIAPE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 241 DKCDIYSFGVLLAVLMMGKFP 261
+KCD++S GV+L +L+ G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + S T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + S D+++ G ++ L+ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
E L K +++EI +++H NIV L L+ + G L D + V +G
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG 111
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGLA 207
+ +R I L+ + H I+HRD++P N+L +D+D + IS+FGL+
Sbjct: 112 -----FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 208 KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
K G +T T GY+APE S D +S GV+ +L+ G P F+
Sbjct: 167 KMEDPGSVLSTACG---TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP---FYD 220
Query: 268 HTKEMSFVQWMRNVMTSENP 287
F Q ++ ++P
Sbjct: 221 ENDAKLFEQILKAEYEFDSP 240
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 100 IQSEIITAGQVRHRNIVPLLAR---VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELD 155
I+++II QV H P + D ++ + E GSL +L + + E+
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI- 115
Query: 156 WLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRT 215
L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +FG++ Q+
Sbjct: 116 -LGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----I 166
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ S T Y+APE Q S + DI+S G+ L L +G++P
Sbjct: 167 DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 110 VRHRNIVPLLARVVRPDCD-----LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAR 164
+ H NI + R D LLV E+ NGSL L DW++ R+A
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAH 118
Query: 165 GIASGLEYLHMS------HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPN------ 212
+ GL YLH ++P I HRD+ NVL+ +D IS+FGL+ ++
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP 178
Query: 213 GRTRTTTWSLAETVGYIAPECHQ-TVALSD------KCDIYSFGVLLAVLMM 257
G S T+ Y+APE + V L D + D+Y+ G++ + M
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 73 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW+L T Y+APE
Sbjct: 179 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEI 230
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
E L K +++EI +++H NIV L L+ + G L D + V +G
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG 111
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGLA 207
+ +R I L+ + H I+HRD++P N+L +D+D + IS+FGL+
Sbjct: 112 -----FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 208 KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
K G +T T GY+APE S D +S GV+ +L+ G P F+
Sbjct: 167 KMEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP---FYD 220
Query: 268 HTKEMSFVQWMRNVMTSENP 287
F Q ++ ++P
Sbjct: 221 ENDAKLFEQILKAEYEFDSP 240
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 33/238 (13%)
Query: 28 LIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIK 87
L +K+ + LK +D F + ++ + G V+K SG V+ K LI
Sbjct: 56 LTQKQKVGELKDDD-FEKISELGAGNGGVVFKVSH-KPSGLVMARK-----------LIH 102
Query: 88 QDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR---VVRPDCDL-LVYEFRRNGSLQDI 143
+ +P I+++II QV H P + D ++ + E GSL +
Sbjct: 103 LEIKP------AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 156
Query: 144 LYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 203
L GR L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +
Sbjct: 157 LKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCD 210
Query: 204 FGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
FG++ Q+ + S T Y++PE Q S + DI+S G+ L + +G++P
Sbjct: 211 FGVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 91 EPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQG 150
E L K +++EI +++H NIV L L+ + G L D + V +G
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG 111
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGLA 207
+ +R I L+ + H I+HRD++P N+L +D+D + IS+FGL+
Sbjct: 112 -----FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 208 KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
K G +T T GY+APE S D +S GV+ +L+ G P F+
Sbjct: 167 KMEDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP---FYD 220
Query: 268 HTKEMSFVQWMRNVMTSENP 287
F Q ++ ++P
Sbjct: 221 ENDAKLFEQILKAEYEFDSP 240
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLAETV 226
GL+Y+H + IIHRD++P+NV +++D E RI +FGLA+Q T T W
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW------ 193
Query: 227 GYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEM 272
Y APE + + DI+S G ++A L+ GK FP D+ K +
Sbjct: 194 -YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLAETV 226
GL+Y+H + IIHRD++P+NV +++D E RI +FGLA+Q T T W
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW------ 193
Query: 227 GYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEM 272
Y APE + + DI+S G ++A L+ GK FP D+ K +
Sbjct: 194 -YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 128
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 129 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLAETV 226
GL+Y+H + IIHRD++P+NV +++D E RI +FGLA+Q T T W A +
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEI 191
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEM 272
+QTV DI+S G ++A L+ GK FP D+ K +
Sbjct: 192 MLNWMHYNQTV------DIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 33/238 (13%)
Query: 28 LIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIK 87
L +K+ + LK +D F + ++ + G V+K SG V+ K LI
Sbjct: 21 LTQKQKVGELKDDD-FEKISELGAGNGGVVFKVSHK-PSGLVMARK-----------LIH 67
Query: 88 QDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR---VVRPDCDL-LVYEFRRNGSLQDI 143
+ +P I+++II QV H P + D ++ + E GSL +
Sbjct: 68 LEIKP------AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 121
Query: 144 LYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 203
L GR L + IA + GL YL H+ I+HRD++P+N+L++ E ++ +
Sbjct: 122 LKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCD 175
Query: 204 FGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
FG++ Q+ + S T Y++PE Q S + DI+S G+ L + +G++P
Sbjct: 176 FGVSGQL----IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 118 LLARVVRPDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARG 165
+L+ V DC +V Y F L IL D+ G L++H + A
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GLE++H +++RD++PAN+L+D+ RIS+ GLA + + T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG----T 353
Query: 226 VGYIAPECHQT-VALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH-TKEMSFVQWMRNVMT 283
GY+APE Q VA D +S G +L L+ G P F QH TK+ + M M
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 410
Query: 284 SENP 287
E P
Sbjct: 411 VELP 414
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 118 LLARVVRPDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARG 165
+L+ V DC +V Y F L IL D+ G L++H + A
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GLE++H +++RD++PAN+L+D+ RIS+ GLA + + T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG----T 353
Query: 226 VGYIAPECHQT-VALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH-TKEMSFVQWMRNVMT 283
GY+APE Q VA D +S G +L L+ G P F QH TK+ + M M
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 410
Query: 284 SENP 287
E P
Sbjct: 411 VELP 414
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV- 123
S G+++ K++ +EAE KQ + SE+ +++H NIV R++
Sbjct: 29 SDGKILVWKELDYGSMTEAE--KQ----------MLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 124 RPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR-- 180
R + L +V E+ G L + +++G +E +L + R + L HR
Sbjct: 77 RTNTTLYIVMEYCEGGDLASV---ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 181 ---IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTV 237
++HRD++PANV +D ++ +FGLA+ I N T + + T Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDT-SFAKAFVGTPYYMSPEQMNRM 191
Query: 238 ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ ++K DI+S G LL L P F Q
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +E + + G+VYK +G++ IK V+ E E IKQ+ M++ S
Sbjct: 26 FELVELVGNGTYGQVYKGRHV-KTGQLAAIK-VMDVTGDEEEEIKQEI-----NMLKKYS 78
Query: 103 EIITAGQVRHRNIVPLLARVVR---PDCD---LLVYEFRRNGSLQDILYDVSQGRRELDW 156
HRNI ++ P D LV EF GS+ D++ + + +W
Sbjct: 79 --------HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+A I R I GL +LH ++IHRDI+ NVL+ ++ E ++ +FG++ Q+ R
Sbjct: 131 IAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 217 TTTWSLAETVGYIAPE---CHQT--VALSDKCDIYSFGVLLAVLMMGKFP 261
T T ++APE C + K D++S G+ + G P
Sbjct: 186 RNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 145
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 146 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
SE GQ H NI+ L V + +++ E+ NGSL D + GR + L
Sbjct: 79 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVG-- 135
Query: 162 IARGIASGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTT 219
+ RGI SG++YL MS +HRD+ N+L++ ++ ++S+FG+++ + + TT
Sbjct: 136 MLRGIGSGMKYLSDMSA----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
+ + APE + D++S+G+++ V+ G+ P D
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 118 LLARVVRPDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARG 165
+L+ V DC +V Y F L IL D+ G L++H + A
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 299
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GLE++H +++RD++PAN+L+D+ RIS+ GLA + + T
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG----T 352
Query: 226 VGYIAPECHQT-VALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH-TKEMSFVQWMRNVMT 283
GY+APE Q VA D +S G +L L+ G P F QH TK+ + M M
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 409
Query: 284 SENP 287
E P
Sbjct: 410 VELP 413
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 118 LLARVVRPDCDLLV---YEFRRNGSLQDILYDVSQGRRELDWLARHRI---------ARG 165
+L+ V DC +V Y F L IL D+ G L++H + A
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GLE++H +++RD++PAN+L+D+ RIS+ GLA + + T
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG----T 353
Query: 226 VGYIAPECHQT-VALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH-TKEMSFVQWMRNVMT 283
GY+APE Q VA D +S G +L L+ G P F QH TK+ + M M
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMA 410
Query: 284 SENP 287
E P
Sbjct: 411 VELP 414
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 47/245 (19%)
Query: 22 PTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV---- 75
PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 4 PTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQHST 51
Query: 76 ---IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVY 132
++ + E E++K H +++ + +AG+ RN+ L+
Sbjct: 52 EEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK-------------LIM 92
Query: 133 EFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL 192
E+ GSL+D L + + +D + + I G+EYL R IHRD+ N+L
Sbjct: 93 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 146
Query: 193 IDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVL 251
++++ +I +FGL K +P + E+ + + APE S D++SFGV+
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 252 LAVLM 256
L L
Sbjct: 207 LYELF 211
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 92 PLHHKM-IQIQSEIITAGQVRHRNIVPLLA---RVVRPDCDL-LVYEFRRNGSLQDILYD 146
PL K Q + EI + ++H N++ +A R + +L L+ F GSL D L
Sbjct: 47 PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG 106
Query: 147 VSQGRRELDWLARHRIARGIASGLEYLHM--------SHRPRIIHRDIQPANVLIDDDME 198
+ W +A ++ GL YLH H+P I HRD + NVL+ D+
Sbjct: 107 -----NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT 161
Query: 199 ARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD-----KCDIYSFGVLLA 253
A +++FGLA + G+ T T Y+APE + + D+Y+ G++L
Sbjct: 162 AVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 221
Query: 254 VLM 256
L+
Sbjct: 222 ELV 224
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 155
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 156 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL + + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 47/245 (19%)
Query: 22 PTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV---- 75
PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 2 PTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQHST 49
Query: 76 ---IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVY 132
++ + E E++K H +++ + +AG+ RN+ L+
Sbjct: 50 EEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK-------------LIM 90
Query: 133 EFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL 192
E+ GSL+D L + + +D + + I G+EYL R IHRD+ N+L
Sbjct: 91 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 144
Query: 193 IDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVL 251
++++ +I +FGL K +P + E+ + + APE S D++SFGV+
Sbjct: 145 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 204
Query: 252 LAVLM 256
L L
Sbjct: 205 LYELF 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 39 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 144
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID+ ++++FG AK R + TW L T Y+APE
Sbjct: 145 HSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 196
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 47 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 152
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 153 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 204
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR-- 121
G+ G V + L +LI + +P I+++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 122 -VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVAL 239
I+HRD++P+N+L++ E ++ +FG++ Q+ + S T Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTHY 180
Query: 240 SDKCDIYSFGVLLAVLMMGKFP 261
S + DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR-- 121
G+ G V + L +LI + +P I+++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 122 -VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVAL 239
I+HRD++P+N+L++ E ++ +FG++ Q+ + S T Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTHY 180
Query: 240 SDKCDIYSFGVLLAVLMMGKFP 261
S + DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 25/173 (14%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD--LLVYEFRRNGSLQDI--LYDVSQGRREL 154
Q+ EI ++ H N+V L+ + P+ D +V+E G + ++ L +S+ +
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF 141
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
+ + + G+EYLH +IIHRDI+P+N+L+ +D +I++FG++ +
Sbjct: 142 YF-------QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF---- 187
Query: 215 TRTTTWSLAETVG---YIAPEC---HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + L+ TVG ++APE + + D+++ GV L + G+ P
Sbjct: 188 -KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR-- 121
G+ G V + L +LI + +P I+++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 122 -VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVAL 239
I+HRD++P+N+L++ E ++ +FG++ Q+ + S T Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTHY 180
Query: 240 SDKCDIYSFGVLLAVLMMGKFP 261
S + DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR-- 121
G+ G V + L +LI + +P I+++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 122 -VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVAL 239
I+HRD++P+N+L++ E ++ +FG++ Q+ + S T Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTHY 180
Query: 240 SDKCDIYSFGVLLAVLMMGKFP 261
S + DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 73 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 178
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 179 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 230
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAETV 226
SG++YL +HRD+ N+LI+ ++ ++S+FGL++ + + TT +
Sbjct: 158 SGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ +PE + D++S+G++L V+ G+ P
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR-- 121
G+ G V + L +LI + +P I+++II QV H P +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 70
Query: 122 -VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 125
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVAL 239
I+HRD++P+N+L++ E ++ +FG++ Q+ + S T Y++PE Q
Sbjct: 126 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTHY 180
Query: 240 SDKCDIYSFGVLLAVLMMGKFP 261
S + DI+S G+ L + +G++P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 37/235 (15%)
Query: 29 IEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELI 86
E+ L FL++ + F S+E R L ++G V+ +KK+ +
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 87 KQDSEPL----HHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQD 142
+++ E L H +++ + +AG+ RN+ L+ E+ GSL+D
Sbjct: 77 EREIEILKSLQHDNIVKYKGVCYSAGR---RNLK-------------LIMEYLPYGSLRD 120
Query: 143 ILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARIS 202
L + + +D + + I G+EYL R IHRD+ N+L++++ +I
Sbjct: 121 YL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIG 174
Query: 203 EFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
+FGL K +P + E+ + + APE S D++SFGV+L L
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 37/235 (15%)
Query: 29 IEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELI 86
E+ L FL++ + F S+E R L ++G V+ +KK+ +
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 87 KQDSEPL----HHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQD 142
+++ E L H +++ + +AG+ RN+ L+ E+ GSL+D
Sbjct: 77 EREIEILKSLQHDNIVKYKGVCYSAGR---RNLK-------------LIMEYLPYGSLRD 120
Query: 143 ILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARIS 202
L + + +D + + I G+EYL R IHRD+ N+L++++ +I
Sbjct: 121 YL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIG 174
Query: 203 EFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
+FGL K +P + E+ + + APE S D++SFGV+L L
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 53 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 58/292 (19%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRH----------- 112
G+ G+V+ + + + I+ E K+ I SE++ + H
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEE----KLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 113 --RNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY--DVSQGRRELDWLARHRIARGIAS 168
RN V + V + + E+ N +L D+++ +++Q R E W R+ R I
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-W----RLFRQILE 127
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPN-------------GRT 215
L Y+H IIHRD++P N+ ID+ +I +FGLAK + G +
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 216 RTTTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
T ++ T Y+A E T ++K D+YS G++ ++ +P F + ++
Sbjct: 185 DNLTSAIG-TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YP---FSTGMERVNI 237
Query: 275 VQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSK 326
++ +R+V + E P D+K M + KI DP +RP ++
Sbjct: 238 LKKLRSV-SIEFPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
+++EI +++H NIV L LV + G L D + + R
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE----RGVYTEKDA 108
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTR 216
+ + + S ++YLH + I+HRD++P N+L +++ + I++FGL+K NG
Sbjct: 109 SLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165
Query: 217 TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
T T GY+APE S D +S GV+ +L+ G P F++ T+ F +
Sbjct: 166 TA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP---FYEETESKLFEK 218
Query: 277 WMRNVMTSENP 287
E+P
Sbjct: 219 IKEGYYEFESP 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + S T
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ EI +RH NI+ + L+ EF G L Y Q D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFD--- 112
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A + + LH H ++IHRDI+P N+L+ E +I++FG + P+ R R
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX- 171
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD 263
+ T+ Y+ PE + +K D++ GVL ++G P D
Sbjct: 172 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ EI +RH NI+ + L+ EF G L Y Q D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFD--- 112
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A + + LH H ++IHRDI+P N+L+ E +I++FG + P+ R R
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX- 171
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD 263
+ T+ Y+ PE + +K D++ GVL ++G P D
Sbjct: 172 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + S T
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 47/245 (19%)
Query: 22 PTIFSPLIEKEDLAFLKK--EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV---- 75
PT F E+ L FL++ + F S+E R L ++G V+ +KK+
Sbjct: 4 PTQF----EERHLKFLQQLGKGNFGSVEMCRY--------DPLQDNTGEVVAVKKLQHST 51
Query: 76 ---IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVY 132
++ + E E++K H +++ + +AG+ RN+ L+
Sbjct: 52 EEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGR---RNLK-------------LIM 92
Query: 133 EFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL 192
E+ GSL+D L + + +D + + I G+EYL R IHRD+ N+L
Sbjct: 93 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 146
Query: 193 IDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVL 251
++++ +I +FGL K +P + E+ + + APE S D++SFGV+
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 252 LAVLM 256
L L
Sbjct: 207 LYELF 211
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 53 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW+L T Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 209
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 93 LHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR 152
L K +++EI +++H NIV L L+ + G L D + V +G
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKG-- 111
Query: 153 ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVL---IDDDMEARISEFGLAKQ 209
+ +R I L+ + H I+HRD++P N+L +D+D + IS+FGL+K
Sbjct: 112 ---FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 210 IPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHT 269
G +T T GY+APE S D +S GV+ +L+ G P F+
Sbjct: 169 EDPGSVLSTA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP---FYDEN 222
Query: 270 KEMSFVQWMRNVMTSENP 287
F Q ++ ++P
Sbjct: 223 DAKLFEQILKAEYEFDSP 240
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ EI +RH NI+ + L+ EF G L Y Q D
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFD--- 113
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
R A + + LH H ++IHRDI+P N+L+ E +I++FG + P+ R R
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX- 172
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSD 263
+ T+ Y+ PE + +K D++ GVL ++G P D
Sbjct: 173 ---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRR--ELDWLARHRIARGIASGLEYLHMSHRPRI 181
+ C + EF G+L+ + + RR +LD + + I G++Y+H ++
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQITKGVDYIH---SKKL 157
Query: 182 IHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD 241
IHRD++P+N+ + D + +I +FGL + N RT + T+ Y++PE +
Sbjct: 158 IHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGK 214
Query: 242 KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYE 301
+ D+Y+ G++LA L+ D F+ +K F +R+ + S+ + + L
Sbjct: 215 EVDLYALGLILAELL---HVCDTAFETSK---FFTDLRDGIISDIFDKKEKTLL------ 262
Query: 302 EQMLLVLKIACFCTFDDPEERPNSKDV 328
Q LL K PE+RPN+ ++
Sbjct: 263 -QKLLSKK---------PEDRPNTSEI 279
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 45 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V G RR + H A I EYL
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 150
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 151 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 202
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 38/241 (15%)
Query: 42 CFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQ 101
+ L+ + S G V A + G +G + IKK+ +P +SE L K +
Sbjct: 26 VYRDLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSE----------LFAK--RAY 72
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILYDVSQGRREL 154
E+ +RH N++ LL V PD L LV F L ++ G +
Sbjct: 73 RELRLLKHMRHENVIGLL-DVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRI 130
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
+L + GL Y+H + IIHRD++P N+ +++D E +I +FGLA+Q
Sbjct: 131 QFLVYQML-----KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ----- 177
Query: 215 TRTTTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKE 271
+ T Y APE + + DI+S G ++A ++ GK F D KE
Sbjct: 178 ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237
Query: 272 M 272
+
Sbjct: 238 I 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHR-NIVPLLARV 122
GS GRV+ +K K+ K++ Q +++ Q+ H N +L V
Sbjct: 52 GSFGRVMLVKH------------KETGNHFAMKILDKQ-KVVKLKQIEHTLNEKRILQAV 98
Query: 123 VRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYLH 174
P L Y F+ N +L ++ V G RR + H A I EYLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHR-NIVPLLARV 122
GS GRV+ +K K+ K++ Q +++ Q+ H N +L V
Sbjct: 52 GSFGRVMLVKH------------KETGNHFAMKILDKQ-KVVKLKQIEHTLNEKRILQAV 98
Query: 123 VRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYLH 174
P L Y F+ N +L ++ V G RR + H A I EYLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V+ G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHR-NIVPLLARV 122
GS GRV+ +K K+ K++ Q +++ Q+ H N +L V
Sbjct: 52 GSFGRVMLVKH------------KETGNHFAMKILDKQ-KVVKLKQIEHTLNEKRILQAV 98
Query: 123 VRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYLH 174
P L Y F+ N +L ++ V G RR + H A I EYLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
+I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 235 QTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV- 123
S G+++ K++ +EAE KQ + SE+ +++H NIV R++
Sbjct: 29 SDGKILVWKELDYGSMTEAE--KQ----------MLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 124 RPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR-- 180
R + L +V E+ G L + +++G +E +L + R + L HR
Sbjct: 77 RTNTTLYIVMEYCEGGDLASV---ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 181 ---IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTV 237
++HRD++PANV +D ++ +FGLA+ + + + T Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF--VGTPYYMSPEQMNRM 191
Query: 238 ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ ++K DI+S G LL L P F Q
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
+ ++ EI RHRNI+ L + ++++EF S DI ++ EL+
Sbjct: 46 VLVKKEISILNIARHRNILHLHESFESMEELVMIFEF---ISGLDIFERINTSAFELNER 102
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA--RISEFGLAKQIPNGRT 215
+ L++LH SH I H DI+P N++ + +I EFG A+Q+ G
Sbjct: 103 EIVSYVHQVCEALQFLH-SHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFV 275
++ E Y APE HQ +S D++S G L+ VL+ G P F T +
Sbjct: 160 FRLLFTAPE---YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP---FLAETNQ---- 209
Query: 276 QWMRNVMTSE 285
Q + N+M +E
Sbjct: 210 QIIENIMNAE 219
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEFSFNPSHNPEEQL 147
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 269 TKE 271
KE
Sbjct: 265 LKE 267
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 38 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW+L T Y+APE
Sbjct: 143 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 194
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E+ NGSL D + G+ + L + RGI+
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVG--MLRGIS 134
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
+G++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 135 AGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + APE + D++S+G+++ V+ G+ P
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E NGSL L + + + + RGIA
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 128
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 129 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ RI++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 22/211 (10%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ RV T +I + ++I++ + ++ + + E++ Q HRN++ L+
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQ-GHRNVLELIEFFE 81
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D LV+E R GS+ ++ RR + L + + +AS L++LH I H
Sbjct: 82 EEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLH---NKGIAH 134
Query: 184 RDIQPANVLIDDDMEA---RISEFGLAKQIP-NGR-TRTTTWSLAETVG---YIAPEC-- 233
RD++P N+L + + +I +FGL I NG + +T L G Y+APE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 234 --HQTVALSDK-CDIYSFGVLLAVLMMGKFP 261
+ ++ DK CD++S GV+L +L+ G P
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 188
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
Query: 269 TKE 271
KE
Sbjct: 306 LKE 308
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 53 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 140
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 269 TKE 271
KE
Sbjct: 258 LKE 260
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 147
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 269 TKE 271
KE
Sbjct: 265 LKE 267
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 19/222 (8%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI Q+ H N++ A + + +V E G L ++ + +R + +
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
+ S LE++H R++HRDI+PANV I ++ + GL + T SL
Sbjct: 142 FVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSL 196
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVM 282
T Y++PE + K DI+S G LL + + P + +M+ + +
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF-----YGDKMNLYSLCKKIE 251
Query: 283 TSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPN 324
+ P L + Y E++ ++ + C DPE+RP+
Sbjct: 252 QCDYPP------LPSDHYSEELRQLVNM---CINPDPEKRPD 284
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 45 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V G RR + H A I EYL
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 150
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 151 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 202
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 136
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
Query: 269 TKE 271
KE
Sbjct: 254 LKE 256
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 56 EVYKAELPGSSGRVI--TIKKV-----IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAG 108
E++K GS G+V KK I+ LK + L+ D E ++ +++
Sbjct: 21 ELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE-----CTMVEKRVLSLA 75
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
H + + + V E+ G D++Y + Q + D A I
Sbjct: 76 W-EHPFLTHMFCTFQTKENLFFVMEYLNGG---DLMYHI-QSCHKFDLSRATFYAAEIIL 130
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
GL++LH I++RD++ N+L+D D +I++FG+ K+ G +T T Y
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--EFCGTPDY 185
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
IAPE + D +SFGVLL +++G+ P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 53 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V G RR + H A I EYL
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 53 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V G RR + H A I EYL
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQI--PNGRTRTTT 219
I +EYLH ++HRD++P+N+L D+ RI +FG AKQ+ NG T
Sbjct: 125 ITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ T ++APE + CDI+S GVLL ++ G P
Sbjct: 182 Y----TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 53 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V G RR + H A I EYL
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 159 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYSYNPSHNPEEQL 139
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 269 TKE 271
KE
Sbjct: 257 LKE 259
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLH-MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAET 225
SG++YL M + +HRD+ N+LI+ ++ ++S+FGL++ + + TT
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + +PE + D++S+G++L V+ G+ P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR--------- 161
+H+NI+ LL + ++ E+ G+L++ L E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 162 ---IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVLL + +G P ++ F+ KE
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
SSG+++ +KK+ +L KQ L + +E++ +H N+V + +
Sbjct: 43 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 88
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 89 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCD 244
DI+ ++L+ D ++S+FG Q+ R L T ++APE + + D
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 198
Query: 245 IYSFGVLLAVLMMGKFP 261
I+S G+++ ++ G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N++ID ++++FG AK R + TW L T Y+APE
Sbjct: 158 HSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 73 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V G RR + H A I EYL
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 179 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 230
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G V+ + + ++ ++I++ S ++ E+ + H NI+ L
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS-KLLEEVAVLKLLDHPNIMKLYDFFE 106
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
LV E + G L +D R + + + I + + SG+ YLH + I+H
Sbjct: 107 DKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVH 159
Query: 184 RDIQPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALS 240
RD++P N+L++ D +I +FGL+ N + T YIAPE +
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG---TAYYIAPEVLRK-KYD 215
Query: 241 DKCDIYSFGVLLAVLMMGKFP 261
+KCD++S GV+L +L+ G P
Sbjct: 216 EKCDVWSIGVILFILLAGYPP 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 53 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
SSG+++ +KK+ +L KQ L + +E++ +H N+V + +
Sbjct: 47 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 92
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 93 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCD 244
DI+ ++L+ D ++S+FG Q+ R L T ++APE + + D
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 202
Query: 245 IYSFGVLLAVLMMGKFP 261
I+S G+++ ++ G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 136 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS 189
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ V G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 263
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
SSG+++ +KK+ +L KQ L + +E++ +H N+V + +
Sbjct: 52 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 97
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 98 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCD 244
DI+ ++L+ D ++S+FG Q+ R L T ++APE + + D
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 207
Query: 245 IYSFGVLLAVLMMGKFP 261
I+S G+++ ++ G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 261
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
SSG+++ +KK+ +L KQ L + +E++ +H N+V + +
Sbjct: 54 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 99
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 100 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCD 244
DI+ ++L+ D ++S+FG Q+ R L T ++APE + + D
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 209
Query: 245 IYSFGVLLAVLMMGKFP 261
I+S G+++ ++ G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 132 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 53 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ G RR + H A I EY
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N++ID ++++FG AK R + TW L T Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 137 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 135 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 188
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 57 VYKAELPGSS--GRVITIKKVIQPLKSEAELIK----QDSEPLHHKMIQIQSEIITAGQV 110
V K E+ G G+V ++ LK A++IK +D E ++++EI Q+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-------EVKNEISVMNQL 143
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGL 170
H N++ L + +LV E+ G L D + D S ELD + + I G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL---FMKQICEGI 200
Query: 171 EYLHMSHRPRIIHRDIQPANVLI--DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
++H + I+H D++P N+L D + +I +FGLA++ + E +
Sbjct: 201 RHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE---F 254
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+APE +S D++S GV+ +L+ G P
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 266
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 133
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 134 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 187
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 44/270 (16%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-YDVSQG- 150
++ ++ E++ V H+NI+ LL V P L EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVI 119
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA--- 173
Query: 211 PNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
RT T++ + V Y APE + + DI+S GV++ ++ G FP D
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Query: 266 FQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
QW + + PS KL
Sbjct: 231 ID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 137 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 53 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLE 171
V P L + F+ N +L ++ + + G L R A I E
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAP 231
YLH +I+RD++P N++ID ++++FG AK R + TW L T Y+AP
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 232 ECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
E + + D ++ GVL+ + G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 44/270 (16%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-YDVSQG- 150
++ ++ E++ V H+NI+ LL V P L EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVI 119
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA--- 173
Query: 211 PNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
RT T++ + V Y APE + + DI+S GV++ ++ G FP D
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Query: 266 FQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
QW + + PS KL
Sbjct: 231 ID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 128
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 129 G---FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 182
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 183 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 53 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLE 171
V P L + F+ N +L ++ + + G L R A I E
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAP 231
YLH +I+RD++P N++ID ++++FG AK R + TW L T Y+AP
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 232 ECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
E + + D ++ GVL+ + G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPD-CDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 155
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 156 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 210 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 320
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
++H +V L A VV + ++ EF GSL D L ++ L L + IA G
Sbjct: 67 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEG 123
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
+ ++ + IHRD++ AN+L+ + +I++FGLA+ I + T + +
Sbjct: 124 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWT 179
Query: 230 APECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
APE + + K D++SFG+LL ++ G+ P
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 136 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 189
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQI--PNGRTRTTT 219
I +EYLH ++HRD++P+N+L D+ RI +FG AKQ+ NG T
Sbjct: 125 ITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 220 WSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ T ++APE + CDI+S GVLL + G P
Sbjct: 182 Y----TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 154
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G++YL + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 155 G---FGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 209 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR-- 121
G+ G V + L +LI + +P I+++II QV H P +
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLEIKP------AIRNQIIRELQVLHECNSPYIVGFY 73
Query: 122 -VVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
D ++ + E GSL +L GR L + IA + GL YL H+
Sbjct: 74 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK- 128
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVAL 239
I+HRD++P+N+L++ E ++ +FG++ Q+ T Y++PE Q
Sbjct: 129 -IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEFVGTRSYMSPERLQGTHY 183
Query: 240 SDKCDIYSFGVLLAVLMMGKFP 261
S + DI+S G+ L + +G++P
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 108 GQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIA 167
GQ H NI+ L V + ++V E NGSL L + + + + RGIA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIA 157
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNG-RTRTTTWSLAETV 226
SG++YL +HRD+ N+LI+ ++ ++S+FGL++ + + TT +
Sbjct: 158 SGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ +PE + D++S+G++L V+ G+ P
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
V E+ G D++Y + Q + D A I GL++LH I++RD++
Sbjct: 94 FFVMEYLNGG---DLMYHI-QSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKL 146
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
N+L+D D +I++FG+ K+ G +T + T YIAPE + D +SF
Sbjct: 147 DNILLDKDGHIKIADFGMCKENMLGDAKTNXF--CGTPDYIAPEILLGQKYNHSVDWWSF 204
Query: 249 GVLLAVLMMGKFP 261
GVLL +++G+ P
Sbjct: 205 GVLLYEMLIGQSP 217
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G+V +A G +K ++ LKS A D + ++I S + GQ H N
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAH---ADEKEALMSELKIMSHL---GQ--HEN 111
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
IV LL L++ E+ G L + L S R L+ IA AS + LH
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTASTRDLLH 168
Query: 175 MSHR----------PRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
S + IHRD+ NVL+ + A+I +FGLA+ I N +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQ 276
V ++APE + + D++S+G+LL + +G P ++K V+
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ E+ G+L++ L YD+++ E + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I S LEYLH IIHRD++P N+L+++DM +I++FG AK + + T
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y++PE + D+++ G ++ L+ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
+GR++ IKK ++ + +++K+ + EI Q+RH N+V LL +
Sbjct: 48 DTGRIVAIKKFLE--SDDDKMVKKIA----------MREIKLLKQLRHENLVNLLEVCKK 95
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
LV+EF + IL D+ LD+ + I +G+ + H SH IIHR
Sbjct: 96 KKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGIGFCH-SHN--IIHR 148
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPN-GRTRTTTWSLAETVGYIAPECH-QTVALSDK 242
DI+P N+L+ ++ +FG A+ + G T Y APE V
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---VATRWYRAPELLVGDVKYGKA 205
Query: 243 CDIYSFGVLLAVLMMGK--FPSD 263
D+++ G L+ + MG+ FP D
Sbjct: 206 VDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYCYNPSHNPEEQL 147
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 269 TKE 271
KE
Sbjct: 265 LKE 267
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T Y+AP
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ + G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T E Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE---YLAPEVLEDNDYGRA 185
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 186 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRR----ELDWLARHR----- 161
+H+NI+ LL + ++ E+ G+L++ L Q RR E + H
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----QARRPPGLEYCYNPSHNPEEQL 132
Query: 162 -------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+EYL + IHRD+ NVL+ +D +I++FGLA+ I +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQH 268
T + V ++APE + + D++SFGVLL + +G P ++ F+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 269 TKE 271
KE
Sbjct: 250 LKE 252
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
SSG+++ +KK+ +L KQ L + +E++ +H N+V + +
Sbjct: 97 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 142
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 143 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCD 244
DI+ ++L+ D ++S+FG Q+ R L T ++APE + + D
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 252
Query: 245 IYSFGVLLAVLMMGKFP 261
I+S G+++ ++ G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
++H +V L A VV + ++ EF GSL D L ++ L L + IA G
Sbjct: 240 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEG 296
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
+ ++ + IHRD++ AN+L+ + +I++FGLA+ I + T + +
Sbjct: 297 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWT 352
Query: 230 APECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
APE + + K D++SFG+LL ++ G+ P
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ + G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI ++ H NIV LL + + LV+EF L+D + D S L + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM-DASA----LTGIPLPLI 105
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHE 163
Query: 223 AETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 29/229 (12%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
+E++ +H N+V + + + ++ EF + G+L DI VSQ R + +A
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI---VSQVRLNEEQIAT-- 145
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ + L YLH +IHRDI+ ++L+ D ++S+FG QI +
Sbjct: 146 VCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX-- 200
Query: 222 LAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNV 281
L T ++APE + + DI+S G+++ ++ G+ P +F S VQ M+ +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP---YFSD----SPVQAMKRL 253
Query: 282 MTSENPSRTIDSKL--IGNGYEEQMLLVLKIACFCTFDDPEERPNSKDV 328
S P K+ + + E+ML+ DP+ER ++++
Sbjct: 254 RDSPPPKLKNSHKVSPVLRDFLERMLV----------RDPQERATAQEL 292
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 19 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 79 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 131
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T E Y+APE +
Sbjct: 132 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE---YLAPEVLEDNDYGRA 188
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 189 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 217
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 53 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLEY 172
V P L + F+ N +L ++ + + G L R A I EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N++ID ++++FG AK R + TW L T Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
H NIV L LV E G L ++ + ++ I R + S +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVS 120
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIP--NGRTRTTTWSLAETV 226
++H ++HRD++P N+L +D++E +I +FG A+ P N +T + T+
Sbjct: 121 HMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF----TL 173
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y APE + CD++S GV+L ++ G+ P
Sbjct: 174 HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T E Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE---YLAPEVLEDNDYGRA 185
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 186 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEY 172
V P L + F+ N +L ++ G RR + H A I EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N++ID ++++FG AK R + TW L T Y+APE
Sbjct: 157 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIAS 168
++H NIV L + LV++ G L +DI+ ++ + + I
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQ 111
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTWSLAET 225
LE + H+ ++HRD++P N+L+ + ++++FGLA ++ + + A T
Sbjct: 112 ILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--DQQAWFGFAGT 169
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
GY++PE + A DI++ GV+L +L++G P D QH
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQH 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
SSG+++ +KK+ +L KQ L + +E++ +H N+V + +
Sbjct: 174 SSGKLVAVKKM--------DLRKQQRREL------LFNEVVIMRDYQHENVVEMYNSYLV 219
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
D +V EF G+L DI V+ R + +IA + L+ L + H +IHR
Sbjct: 220 GDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 185 DIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCD 244
DI+ ++L+ D ++S+FG Q+ R L T ++APE + + D
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISRLPYGPEVD 329
Query: 245 IYSFGVLLAVLMMGKFP 261
I+S G+++ ++ G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ LEKI G VYKA+ + G +KK+ ++++ E + I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ--NNYGETFALKKI---------RLEKEDEGIPSTTIR--- 49
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI +++H NIV L + +LV+E + L+ +L DV +G L+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLL-DVCEGG--LESVTAKSF 105
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ--IPNGRTRTTTW 220
+ +G+ Y H R++HRD++P N+LI+ + E +I++FGLA+ IP R T
Sbjct: 106 LLQLLNGIAY---CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYTH 159
Query: 221 SLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FPS 262
+ T+ Y AP+ + S DI+S G + A ++ G FP
Sbjct: 160 EIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLE 171
V P L + F+ N +L ++ + + G L R A I E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAP 231
YLH +I+RD++P N++ID ++++FG AK R + TW L T Y+AP
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 232 ECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
E + + D ++ GVL+ + G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E T ++ H +V + +V E+ NG L + L +G L +
Sbjct: 53 EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL---EM 109
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
+ G+ +L SH+ IHRD+ N L+D D+ ++S+FG+ + + + + ++
Sbjct: 110 CYDVCEGMAFLE-SHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV-GT 165
Query: 223 AETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSD 263
V + APE S K D+++FG+L+ V +GK P D
Sbjct: 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 104 LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 41 DCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI 100
+ F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA---------- 49
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLA 158
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIP 101
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTY 160
Query: 219 TWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T + T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 161 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ A +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNAMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 12 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKIR--LDTETEGVPSTA----------IR 58
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 110
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 169
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 170 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
M QI++EI + H NI+ + +V E G L + + + L
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD---MEARISEFGLAKQIPNG 213
+ + + + L Y H H ++H+D++P N+L D +I +FGLA+ +
Sbjct: 124 GYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Query: 214 RTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T A T Y+APE + ++ KCDI+S GV++ L+ G P
Sbjct: 181 EHSTNA---AGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ ++ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLE 171
V P L + F+ N +L ++ + + G L R A I E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAP 231
YLH +I+RD++P N++ID ++++FGLAK R + TW L T Y+AP
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAP 207
Query: 232 ECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
E + + D ++ GVL+ + G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ LEKI G VYKA+ + G +KK+ ++++ E + I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ--NNYGETFALKKI---------RLEKEDEGIPSTTIR--- 49
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI +++H NIV L + +LV+E + L+ +L DV +G L+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLL-DVCEGG--LESVTAKSF 105
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ--IPNGRTRTTTW 220
+ +G+ Y H R++HRD++P N+LI+ + E +I++FGLA+ IP R T
Sbjct: 106 LLQLLNGIAY---CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYTH 159
Query: 221 SLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FPS 262
+ T+ Y AP+ + S DI+S G + A ++ G FP
Sbjct: 160 EVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L + F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA------ 52
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
EI ++ H NIV LL + + LV+EF + L+D + D S L
Sbjct: 53 ----IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASA----LTG 102
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPV 160
Query: 217 TTTWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ LEKI G VYKA+ + G +KK+ ++++ E + I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ--NNYGETFALKKI---------RLEKEDEGIPSTTIR--- 49
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI +++H NIV L + +LV+E + L+ +L DV +G L+ +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLL-DVCEGG--LESVTAKSF 105
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ--IPNGRTRTTTW 220
+ +G+ Y H R++HRD++P N+LI+ + E +I++FGLA+ IP R T
Sbjct: 106 LLQLLNGIAY---CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYTH 159
Query: 221 SLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FPS 262
+ T+ Y AP+ + S DI+S G + A ++ G FP
Sbjct: 160 EVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPG 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +K+ +++K++ ++ +E RH + L
Sbjct: 162 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 221
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S L+YLH +++
Sbjct: 222 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKN--VVY 275
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RD++ N+++D D +I++FGL K+ I +G T T T Y+APE +
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGTPEYLAPEVLEDNDYGRA 332
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 333 VDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 361
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 41 DCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI 100
+ F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKIR--LDTETEGVPSTA---------- 56
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLA 158
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIP 108
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTY 167
Query: 219 TWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T + T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 168 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L + F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA------ 51
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
EI ++ H NIV LL + + LV+EF + L+D + D S L
Sbjct: 52 ----IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASA----LTG 101
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G
Sbjct: 102 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPV 159
Query: 217 TTTWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 26 SPLIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAEL 85
PL++ E+ F +EKI G VYKA +G V+ +KK+ L +E E
Sbjct: 1 GPLVDMEN---------FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKIR--LDTETEG 48
Query: 86 IKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI-- 143
+ + EI ++ H NIV LL + + LV+EF QD+
Sbjct: 49 VPSTA----------IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKK 94
Query: 144 LYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 203
D S L + I + L+ L H R++HRD++P N+LI+ + ++++
Sbjct: 95 FMDASA----LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLAD 150
Query: 204 FGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--F 260
FGLA+ RT T + T+ Y APE S DI+S G + A ++ + F
Sbjct: 151 FGLARAF-GVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
Query: 261 PSD 263
P D
Sbjct: 209 PGD 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +K+ +++K++ ++ +E RH + L
Sbjct: 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S L+YLH +++
Sbjct: 219 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKN--VVY 272
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RD++ N+++D D +I++FGL K+ I +G T T T Y+APE +
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGTPEYLAPEVLEDNDYGRA 329
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 330 VDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 358
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCD--LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
++ EI + H NIV + L+ EF +GSL++ L + + +++
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLK 126
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+ + A I G++YL + +HRD+ NVL++ + + +I +FGL K I +
Sbjct: 127 QQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 218 TTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
T ++ V + APEC D++SFGV L L+
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 52
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 163
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 164 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCD--LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
++ EI + H NIV + L+ EF +GSL++ L + + +++
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLK 114
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+ + A I G++YL + +HRD+ NVL++ + + +I +FGL K I +
Sbjct: 115 QQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 218 TTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
T ++ V + APEC D++SFGV L L+
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 66 SGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS--EIITAGQVRHRNIVPLLARVV 123
+G ++ IKK+ EP + +++ EI +H NI+ + +
Sbjct: 35 TGEIVAIKKI---------------EPFDKPLFALRTLREIKILKHFKHENIITIF-NIQ 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
RPD F +Q+++ L+ I I L + + H +IH
Sbjct: 79 RPDS---FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQI---------PNGRTRTTTWSLAETVGYIAPECH 234
RD++P+N+LI+ + + ++ +FGLA+ I P G+ T +A T Y APE
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA-TRWYRAPEVM 194
Query: 235 QTVA-LSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
T A S D++S G +LA L + + FP D+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ QV H N++ L +L+ E G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQIPNGR 214
+ I G+ YLH +I H D++P N+++ D ++ +FGLA +I +G
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP------------- 261
+ E ++APE L + D++S GV+ +L+ G P
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 262 -------SDDFFQHTKEMSFVQWMRNVMTSENPSR 289
++FF HT E++ ++R ++ E R
Sbjct: 231 TSVSYDFDEEFFSHTSELA-KDFIRKLLVKETRKR 264
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 47 EKIR-SCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEII 105
EKIR C+ E+ + G G+V ++KV + A K + + K + +++
Sbjct: 12 EKIRPECF--ELLRVLGKGGYGKVFQVRKV-----TGANTGKIFAMKVLKKAMIVRNAKD 64
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR------RE---LDW 156
TA RNI L V P L+Y F+ G L IL +S G RE ++
Sbjct: 65 TAHTKAERNI---LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ-IPNGRT 215
A +A I+ L +LH + II+RD++P N++++ ++++FGL K+ I +G
Sbjct: 122 TACFYLAE-ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-- 175
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFV 275
T T + T+ Y+APE + D +S G L+ ++ G P
Sbjct: 176 -TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP-------------- 220
Query: 276 QWMRNVMTSENPSRTIDSKL 295
T EN +TID L
Sbjct: 221 ------FTGENRKKTIDKIL 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ Q+ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLE 171
V P L + F+ N +L ++ + + G L R A I E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAP 231
YLH +I+RD++P N++ID ++++FG AK R + TW L T Y+AP
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 232 ECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
E + + D ++ GVL+ + G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +
Sbjct: 53 GSFGRVM--------------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLEY 172
V P L + F+ N +L +L + + G L R A I EY
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVL-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH +I+RD++P N+LID ++++FG AK R + TW L T Y+APE
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 135 G---FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 188
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 44/270 (16%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-YDVSQG- 150
++ ++ E++ V H+NI+ LL V P L EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVI 119
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA--- 173
Query: 211 PNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
RT T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 266 FQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
QW + + PS KL
Sbjct: 231 ID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKM-IQIQSEIITAGQVRHR-NIVPLLAR 121
GS GRV+ L+K H+ M I + +++ Q+ H N +L
Sbjct: 52 GSFGRVM--------------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQG------RRELDWLARHR--IARGIASGLEYL 173
V P L + F+ N +L ++ V+ G RR + H A I EYL
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H +I+RD++P N+LID ++++FG AK R + TW L T +APE
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEI 209
Query: 234 HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ + D ++ GVL+ + G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 138 G---FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 191
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 16 GSRDRGP-TIFSPLIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 74
GS GP + LI ++DL L EK+ G V + E SG+ +++
Sbjct: 1 GSAGEGPLQSLTCLIGEKDLRLL---------EKLGDGSFGVVRRGEWDAPSGKTVSVA- 50
Query: 75 VIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEF 134
+ +K D M E+ + HRN++ L V+ P + V E
Sbjct: 51 --------VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 101
Query: 135 RRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLID 194
GSL D L QG L L+R+ + +A G+ YL R IHRD+ N+L+
Sbjct: 102 APLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLA 155
Query: 195 DDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL 252
+I +FGL + +P + + APE +T S D + FGV L
Sbjct: 156 TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 142 G---FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 195
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 196 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 66 SGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS--EIITAGQVRHRNIVPLLARVV 123
+G ++ IKK+ EP + +++ EI +H NI+ + +
Sbjct: 35 TGEIVAIKKI---------------EPFDKPLFALRTLREIKILKHFKHENIITIF-NIQ 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
RPD F +Q+++ L+ I I L + + H +IH
Sbjct: 79 RPDS---FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQI---------PNGRTRTTTWSLAETVGYIAPECH 234
RD++P+N+LI+ + + ++ +FGLA+ I P G+ T +A T Y APE
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA-TRWYRAPEVM 194
Query: 235 QTVA-LSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
T A S D++S G +LA L + + FP D+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI--QSEIITAGQVRHR-NIVPLLA 120
GS GRV+ +K + E +H ++I + +++ ++ H N +L
Sbjct: 52 GSFGRVMLVKHM---------------ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 121 RVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR---------HRIARGIASGLE 171
V P L + F+ N +L ++ + + G L R A I E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAP 231
YLH +I+RD++P N++ID ++++FGLAK R + TW L T Y+AP
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAP 207
Query: 232 ECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
E + + D ++ GVL+ + G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 19/150 (12%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH--RIARGIASGLEYLHMSHRPRIIHR 184
C L++ E G L + Q R + + R I R I + +++LH SH I HR
Sbjct: 100 CLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-SHN--IAHR 152
Query: 185 DIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD 241
D++P N+L + D ++++FG AK+ +T + T Y+APE
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKYDK 208
Query: 242 KCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
CD++S GV++ +L+ G FP F+ +T +
Sbjct: 209 SCDMWSLGVIMYILLCG-FPP--FYSNTGQ 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ RV T +I + ++I++ + ++ + + E++ Q HRN++ L+
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQ-GHRNVLELIEFFE 81
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D LV+E R GS+ ++ RR + L + + +AS L++LH I H
Sbjct: 82 EEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLH---NKGIAH 134
Query: 184 RDIQPANVLIDDDMEA---RISEFGLAKQIP-NGR-TRTTTWSLAETVG---YIAPEC-- 233
RD++P N+L + + +I +F L I NG + +T L G Y+APE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 234 --HQTVALSDK-CDIYSFGVLLAVLMMGKFP 261
+ ++ DK CD++S GV+L +L+ G P
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ QV H N++ L +L+ E G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQIPNGR 214
+ I G+ YLH +I H D++P N+++ D ++ +FGLA +I +G
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP------------- 261
+ E ++APE L + D++S GV+ +L+ G P
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 262 -------SDDFFQHTKEMSFVQWMRNVMTSENPSR 289
++FF HT E++ ++R ++ E R
Sbjct: 231 TSVSYDFDEEFFSHTSELA-KDFIRKLLVKETRKR 264
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 138 G---FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS 191
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 44/270 (16%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-YDVSQG- 150
++ ++ E++ V H+NI+ LL V P L EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVI 119
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA--- 173
Query: 211 PNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
RT T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 266 FQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
QW + + PS KL
Sbjct: 231 ID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 137 G---FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 19/150 (12%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH--RIARGIASGLEYLHMSHRPRIIHR 184
C L++ E G L + Q R + + R I R I + +++LH SH I HR
Sbjct: 81 CLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDIGTAIQFLH-SHN--IAHR 133
Query: 185 DIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD 241
D++P N+L + D ++++FG AK+ +T + T Y+APE
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVLGPEKYDK 189
Query: 242 KCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
CD++S GV++ +L+ G FP F+ +T +
Sbjct: 190 SCDMWSLGVIMYILLCG-FPP--FYSNTGQ 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 137 G---FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 16 GSRDRGP-TIFSPLIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKK 74
GS GP + LI ++DL L EK+ G V + E SG+ +++
Sbjct: 1 GSAGEGPLQSLTCLIGEKDLRLL---------EKLGDGSFGVVRRGEWDAPSGKTVSVA- 50
Query: 75 VIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEF 134
+ +K D M E+ + HRN++ L V+ P + V E
Sbjct: 51 --------VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 101
Query: 135 RRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLID 194
GSL D L QG L L+R+ + +A G+ YL R IHRD+ N+L+
Sbjct: 102 APLGSLLDRLRK-HQGHFLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLA 155
Query: 195 DDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL 252
+I +FGL + +P + + APE +T S D + FGV L
Sbjct: 156 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWL 157
+++ E +++H NIV L + LV++ G L +DI+ RE
Sbjct: 51 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV------AREF--Y 102
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGR 214
+ + I LE + H I+HR+++P N+L+ + ++++FGLA ++ +
Sbjct: 103 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-- 160
Query: 215 TRTTTW-SLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
+ W A T GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 161 --SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD-LLVYEFRRNGSLQDILYDVSQGRRELDWL 157
Q +E I H N++ LL +R + L+V + ++G L++ + + + D +
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 195
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A G+++L + +HRD+ N ++D+ ++++FGLA+ + + +
Sbjct: 196 G---FGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249
Query: 218 TTWSLAET--VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
V ++A E QT + K D++SFGVLL LM P
Sbjct: 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ QV H N++ L +L+ E G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQIPNGR 214
+ I G+ YLH +I H D++P N+++ D ++ +FGLA +I +G
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP------------- 261
+ E ++APE L + D++S GV+ +L+ G P
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 262 -------SDDFFQHTKEMSFVQWMRNVMTSENPSR 289
++FF HT E++ ++R ++ E R
Sbjct: 231 TSVSYDFDEEFFSHTSELA-KDFIRKLLVKETRKR 264
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ + G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIA 167
+++H NIV L + LV++ G L +DI+ ++ + + I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--------AREFYSEADASHCIQ 135
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTW-SLA 223
LE + H I+HR+++P N+L+ + ++++FGLA ++ + + W A
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND----SEAWHGFA 191
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
T GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 44/270 (16%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-YDVSQG- 150
++ ++ E++ V H+NI+ LL V P L EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVI 119
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA--- 173
Query: 211 PNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
RT T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 266 FQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
QW + + PS KL
Sbjct: 231 ID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 160
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 48/260 (18%)
Query: 47 EKIR-SCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEII 105
EKIR C+ E+ + G G+V ++KV + A K + + K + +++
Sbjct: 12 EKIRPECF--ELLRVLGKGGYGKVFQVRKV-----TGANTGKIFAMKVLKKAMIVRNAKD 64
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR------RE---LDW 156
TA RNI L V P L+Y F+ G L IL +S G RE ++
Sbjct: 65 TAHTKAERNI---LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ-IPNGRT 215
A +A I+ L +LH + II+RD++P N++++ ++++FGL K+ I +G
Sbjct: 122 TACFYLAE-ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-- 175
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFV 275
T T T+ Y+APE + D +S G L+ ++ G P
Sbjct: 176 -TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP-------------- 220
Query: 276 QWMRNVMTSENPSRTIDSKL 295
T EN +TID L
Sbjct: 221 ------FTGENRKKTIDKIL 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWL 157
+++ E +++H NIV L + LV++ G L +DI+ RE
Sbjct: 51 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV------AREF--Y 102
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGR 214
+ + I LE + H I+HR+++P N+L+ + ++++FGLA ++ +
Sbjct: 103 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-- 160
Query: 215 TRTTTW-SLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
+ W A T GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 161 --SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 28/232 (12%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L + F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA------ 53
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRREL 154
EI ++ H NIV LL + + LV+EF QD+ D S L
Sbjct: 54 ----IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----L 101
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
+ I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G
Sbjct: 102 TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GV 159
Query: 215 TRTTTWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 160 PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 28/232 (12%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L + F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA------ 52
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRREL 154
EI ++ H NIV LL + + LV+EF QD+ D S L
Sbjct: 53 ----IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----L 100
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
+ I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G
Sbjct: 101 TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GV 158
Query: 215 TRTTTWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 159 PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 160
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 46 LEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEII 105
LEK+ G V + E SG+ +++ + +K D M E+
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVA---------VKCLKPDVLSQPEAMDDFIREVN 63
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARG 165
+ HRN++ L V+ P + V E GSL D L QG L L+R+ +
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ-- 119
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ YL R IHRD+ N+L+ +I +FGL + +P +
Sbjct: 120 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 226 -VGYIAPECHQTVALSDKCDIYSFGVLL 252
+ APE +T S D + FGV L
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 52
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 52
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 53
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 105
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 163
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 54
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 106
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 164
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G+V +A G +K ++ LKS A D + ++I S + GQ H N
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAH---ADEKEALMSELKIMSHL---GQ--HEN 111
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
IV LL L++ E+ G L + L S R L+ IA S + LH
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTLSTRDLLH 168
Query: 175 MSHR----------PRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
S + IHRD+ NVL+ + A+I +FGLA+ I N +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQ 276
V ++APE + + D++S+G+LL + +G P ++K V+
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 54
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKTFMDASA----LTGIPLP 106
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 164
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 165 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWL 157
+++ E +++H NIV L + LV++ G L +DI+ RE
Sbjct: 50 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV------AREF--Y 101
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGR 214
+ + I LE + H I+HR+++P N+L+ + ++++FGLA ++ +
Sbjct: 102 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-- 159
Query: 215 TRTTTW-SLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
+ W A T GY++PE + S DI++ GV+L +L++G P D QH
Sbjct: 160 --SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 27/249 (10%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F LEK+ + VYK L ++G + +K+V K DSE
Sbjct: 7 FKQLEKLGNGTYATVYKG-LNKTTGVYVALKEV-----------KLDSE--EGTPSTAIR 52
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR--RELDWLARH 160
EI +++H NIV L + + LV+EF N L+ + + G R L+
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ GL + H + +I+HRD++P N+LI+ + ++ +FGLA+ G T
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFS 166
Query: 221 SLAETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMR 279
S T+ Y AP+ + S DI+S G +LA ++ GK F T + ++ +
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK----PLFPGTNDEEQLKLIF 222
Query: 280 NVMTSENPS 288
++M + N S
Sbjct: 223 DIMGTPNES 231
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 52
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 104
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYX 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK---XFCGTPEYLAPEVLEDNDYGRA 185
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 186 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 44/270 (16%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-YDVSQG- 150
++ ++ E++ V H+NI+ LL V P L EF+ + +++ ++SQ
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSL--EEFQDVYIVMELMDANLSQVI 119
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA--- 173
Query: 211 PNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
RT T++ + V Y APE + + DI+S G ++ ++ G FP D
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 266 FQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
QW + + PS KL
Sbjct: 231 ID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 17/222 (7%)
Query: 32 EDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSE 91
+ L L E LEK+ G V + E SG+ +++ + +K D
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVA---------VKCLKPDVL 53
Query: 92 PLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR 151
M E+ + HRN++ L V+ P + V E GSL D L QG
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGH 111
Query: 152 RELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL + +P
Sbjct: 112 FLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 212 NGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + APE +T S D + FGV L
Sbjct: 167 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 21 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 80
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 81 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 133
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T Y+APE +
Sbjct: 134 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 191 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLXQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLXQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIAS 168
++H NIV L + LV++ G L +DI+ ++ + + I
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIHQ 138
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTWSLAET 225
LE ++ H+ I+HRD++P N+L+ + ++++FGLA ++ + + A T
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--EQQAWFGFAGT 196
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
GY++PE + DI++ GV+L +L++G P D QH
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQH 239
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL-----------YDVSQGRRE-LDWLA 158
+H+NI+ LL + ++ + G+L++ L YD+++ E + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+A G+EYL + IHRD+ NVL+ ++ +I++FGLA+ I N
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMG-----KFPSDDFFQHTKE 271
T + V ++APE + + D++SFGVL+ + +G P ++ F+ KE
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + ++ H+N
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKLNHQN 95
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 96 KMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQD----------ILY 145
K Q ++E++T ++H +IV D ++V+E+ ++G L IL
Sbjct: 62 KDFQREAELLT--NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 146 DVS--QGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISE 203
D Q + EL IA IASG+ YL H +HRD+ N L+ ++ +I +
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGD 176
Query: 204 FGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
FG+++ + + + ++ PE + + D++SFGV+L + GK P
Sbjct: 177 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 24 YQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQS----------IIHAK--RTYR 70
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 131 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-- 180
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 181 ---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 53
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 105
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 163
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 7 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 53
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 105
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYX 163
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 164 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 46 LEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEII 105
LEK+ G V + E SG+ +++ + +K D M E+
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVA---------VKCLKPDVLSQPEAMDDFIREVN 63
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARG 165
+ HRN++ L V+ P + V E GSL D L QG L L+R+ +
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ-- 119
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ YL R IHRD+ N+L+ +I +FGL + +P +
Sbjct: 120 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 226 -VGYIAPECHQTVALSDKCDIYSFGVLL 252
+ APE +T S D + FGV L
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 20 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 66
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 127 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + ++ H+N
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKLNHQN 109
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV---SQGRRELDWLARHRIARGIASGLE 171
IV + ++ ++ E G L+ L + L L +AR IA G +
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ ++RH NI+ L +L+ E G L D L E + L
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------AEKESLT 113
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGR 214
+ + L+ +H H RI H D++P N+++ D + ++ +FG+A +I G
Sbjct: 114 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
+ E ++APE L + D++S GV+ +L+ G P F TK+ +
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETL 227
Query: 275 VQ 276
Sbjct: 228 TN 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 17/222 (7%)
Query: 32 EDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSE 91
+ L L E LEK+ G V + E SG+ +++ + +K D
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVA---------VKCLKPDVL 53
Query: 92 PLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR 151
M E+ + HRN++ L V+ P + V E GSL D L QG
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGH 111
Query: 152 RELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
L L+R+ + +A G+ YL R IHRD+ N+L+ +I +FGL + +P
Sbjct: 112 FLLGTLSRYAVQ--VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 212 NGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + APE +T S D + FGV L
Sbjct: 167 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ +G L+D L + R LD + I G+EYL R +HRD+
Sbjct: 87 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 140
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++ + +I++FGLAK +P + ++ + + APE S + D++SF
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 201 GVVLYELF 208
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 186 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 46 LEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEII 105
LEK+ G V + E SG+ +++ + +K D M E+
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVA---------VKCLKPDVLSQPEAMDDFIREVN 63
Query: 106 TAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARG 165
+ HRN++ L V+ P + V E GSL D L QG L L+R+ +
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQ-- 119
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ YL R IHRD+ N+L+ +I +FGL + +P +
Sbjct: 120 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 226 -VGYIAPECHQTVALSDKCDIYSFGVLL 252
+ APE +T S D + FGV L
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +++ ++++++ ++ +E RH + L
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RDI+ N+++D D +I++FGL K+ I +G T T Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 186 VDWWGLGVVMYEMMCGRLP---FYNQDHERLF 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ ++RH NI+ L +L+ E G L D L E + L
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------AEKESLT 127
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGR 214
+ + L+ +H H RI H D++P N+++ D + ++ +FG+A +I G
Sbjct: 128 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
+ E ++APE L + D++S GV+ +L+ G P F TK+ +
Sbjct: 188 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETL 241
Query: 275 VQ 276
Sbjct: 242 TN 243
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHR 113
G+V +A G +K ++ LKS A ++++ + SE+ I + +H
Sbjct: 52 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 102
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR------RELDWLARHRIARGIA 167
NIV LL L++ E+ G L + L ++ R L+ + +A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ +L + IHRD+ NVL+ + A+I +FGLA+ I N + V
Sbjct: 163 QGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQ 276
++APE + + D++S+G+LL + +G P ++K V+
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L I S G V A +G + +KK+ +P +S +H K +
Sbjct: 29 YQNLSPIGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQS----------IIHAK--RTYR 75
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 136 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-- 185
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 186 ---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 24 YQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQS----------IIHAK--RTYR 70
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 131 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-- 180
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 181 ---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 102 SEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
+E++ H N+V + + + D +V EF G+L DI V+ R + +A
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAT-- 145
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ + L YLH +IHRDI+ ++L+ D ++S+FG Q+ +
Sbjct: 146 VCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX-- 200
Query: 222 LAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
L T ++APE + + DI+S G+++ ++ G+ P
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ ++RH NI+ L +L+ E G L D L E + L
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLT 106
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGR 214
+ + L+ +H H RI H D++P N+++ D + ++ +FG+A +I G
Sbjct: 107 EDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 166
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
+ E ++APE L + D++S GV+ +L+ G P F TK+ +
Sbjct: 167 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGETKQETL 220
Query: 275 VQ 276
Sbjct: 221 TN 222
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 94
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV---SQGRRELDWLARHRIARGIASGLE 171
IV + ++ ++ E G L+ L + L L +AR IA G +
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 36 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 86
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 147 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 94
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 34/207 (16%)
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRR--ELDWLARHRIARGIASGLEYLHMSHRPRI 181
+ C + EF G+L+ + + RR +LD + + I G++Y+H ++
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQITKGVDYIH---SKKL 143
Query: 182 IHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD 241
I+RD++P+N+ + D + +I +FGL + N R + T+ Y++PE +
Sbjct: 144 INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTLRYMSPEQISSQDYGK 200
Query: 242 KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYE 301
+ D+Y+ G++LA L+ D F+ +K F +R+ + S+ + + L
Sbjct: 201 EVDLYALGLILAELL---HVCDTAFETSK---FFTDLRDGIISDIFDKKEKTLL------ 248
Query: 302 EQMLLVLKIACFCTFDDPEERPNSKDV 328
Q LL K PE+RPN+ ++
Sbjct: 249 -QKLLSKK---------PEDRPNTSEI 265
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 40/264 (15%)
Query: 16 GSRDRGPTIFSPLIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV 75
GS++R PT + + K + + + +L + S G V A +G + +KK+
Sbjct: 1 GSQER-PTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKL 55
Query: 76 IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLL-----ARVVRPDCDLL 130
+P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 56 SRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 131 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPAN 190
+ L +I+ + +L I GL+Y+H + IIHRD++P+N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-----ILRGLKYIHSAD---IIHRDLKPSN 155
Query: 191 VLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
+ +++D E +I +FGLA+ + T T W A + +QTV DI+S
Sbjct: 156 LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSV 209
Query: 249 GVLLAVLMMGK--FPSDDFFQHTK 270
G ++A L+ G+ FP D K
Sbjct: 210 GCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 109
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 43 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 89
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 150 IYQ-----ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 201
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 252
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +K+ +++K++ ++ +E RH + L
Sbjct: 20 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 79
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S L+YLH +++
Sbjct: 80 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 133
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RD++ N+++D D +I++FGL K+ I +G T T Y+APE +
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 191 VDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 107
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 108 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 165 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 209
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHR 113
G+V +A G +K ++ LKS A ++++ + SE+ I + +H
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 110
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGR------RELDWLARHRIARGIA 167
NIV LL L++ E+ G L + L ++ R L+ + +A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ +L + IHRD+ NVL+ + A+I +FGLA+ I N + V
Sbjct: 171 QGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQ 276
++APE + + D++S+G+LL + +G P ++K V+
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 24 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 70
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 131 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 51 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 101
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV---SQGRRELDWLARHRIARGIASGLE 171
IV + ++ ++ E G L+ L + L L +AR IA G +
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 162 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 44 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 90
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 151 IYQ-----ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 202
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 111
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 172 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 198 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T
Sbjct: 139 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVAT 190
Query: 226 VGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 55 GEVYKAE----LPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQV 110
G+V+ AE LP ++ +K LK +E +QD Q ++E++T +
Sbjct: 32 GKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQD--------FQREAELLT--ML 77
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY-------------DVSQGRRELDWL 157
+H++IV L+V+E+ R+G L L DV+ G L L
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A +A+G+ YL H +HRD+ N L+ + +I +FG+++ I +
Sbjct: 138 LA--VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++ PE + + D++SFGV+L + GK P
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 95
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 55 GEVYKAE----LPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQV 110
G+V+ AE LP ++ +K LK +E +QD Q ++E++T +
Sbjct: 55 GKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQD--------FQREAELLT--ML 100
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY-------------DVSQGRRELDWL 157
+H++IV L+V+E+ R+G L L DV+ G L L
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A +A+G+ YL H +HRD+ N L+ + +I +FG+++ I +
Sbjct: 161 LA--VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++ PE + + D++SFGV+L + GK P
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 198 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +K+ +++K++ ++ +E RH + L
Sbjct: 21 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 80
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S L+YLH +++
Sbjct: 81 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 134
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RD++ N+++D D +I++FGL K+ I +G T E Y+APE +
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE---YLAPEVLEDNDYGRA 191
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 192 VDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+VI +K+ +++K++ ++ +E RH + L
Sbjct: 19 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
D V E+ G L + +S+ R + AR A I S L+YLH +++
Sbjct: 79 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 132
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQ-IPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
RD++ N+++D D +I++FGL K+ I +G T T Y+APE +
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 243 CDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
D + GV++ +M G+ P F+ E F
Sbjct: 190 VDWWGLGVVMYEMMCGRLP---FYNQDHEKLF 218
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 55 GEVYKAE----LPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQV 110
G+V+ AE LP ++ +K LK +E +QD Q ++E++T +
Sbjct: 26 GKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQD--------FQREAELLT--ML 71
Query: 111 RHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY-------------DVSQGRRELDWL 157
+H++IV L+V+E+ R+G L L DV+ G L L
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
+A +A+G+ YL H +HRD+ N L+ + +I +FG+++ I +
Sbjct: 132 LA--VASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++ PE + + D++SFGV+L + GK P
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 108
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 109 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 166 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T
Sbjct: 145 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVAT 196
Query: 226 VGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 244
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ +G L+D L + R LD + I G+EYL R +HRD+
Sbjct: 90 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 143
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++ + +I++FGLAK +P + ++ + + APE S + D++SF
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 204 GVVLYELF 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 123
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 124 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 181 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 103
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 104 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 161 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 205
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 107 AGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY--DVSQGRRELDWLARHRIAR 164
A + RN V V + + E+ N +L D+++ +++Q R E W R+ R
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-W----RLFR 123
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPN------------ 212
I L Y+H IIHR+++P N+ ID+ +I +FGLAK +
Sbjct: 124 QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 213 -GRTRTTTWSLAETVGYIAPEC-HQTVALSDKCDIYSFGVLL 252
G + T ++ T Y+A E T ++K D YS G++
Sbjct: 181 PGSSDNLTSAIG-TAXYVATEVLDGTGHYNEKIDXYSLGIIF 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 114
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 115 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 172 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 198 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ +G L+D L + R LD + I G+EYL R +HRD+
Sbjct: 91 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 144
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++ + +I++FGLAK +P + ++ + + APE S + D++SF
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 205 GVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ +G L+D L + R LD + I G+EYL R +HRD+
Sbjct: 103 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 156
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET-VGYIAPECHQTVALSDKCDIYSF 248
N+L++ + +I++FGLAK +P + ++ + + APE S + D++SF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 249 GVLLAVLM 256
GV+L L
Sbjct: 217 GVVLYELF 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 123
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 124 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 181 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQ-DILYDVSQGRRELDWLARHRIARGIAS 168
++H +IV LL +V+EF L +I+ G + +A H + R I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM-RQILE 141
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
L Y H ++ IIHRD++P NVL+ ++ ++ +FG+A Q+ G + T
Sbjct: 142 ALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGT 196
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
++APE + D++ GV+L +L+ G P F TKE F
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP----FYGTKERLF 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVYSEQDE------LDFLMEALIISKFNHQN 109
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 121
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 182 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ + K+ L +E E + +
Sbjct: 5 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKI--RLDTETEGVPSTA----------IR 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 103
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 162
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ + K+ L +E E + +
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKI--RLDTETEGVPSTA----------IR 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+EF QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH----QDLKKFMDASA----LTGIPLP 102
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 34 YQNLAPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 80
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 141 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 192
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 243
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 95
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 30 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 76
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 137 IYQ-----ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 188
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 36 YQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSKPFQS----------IIHAK--RTYR 82
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 143 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 194
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 20 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 66
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T
Sbjct: 127 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLXQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 145 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 202 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 244
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 16 GSRDRGPTIFSPLIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKV 75
GS++R PT + + K + + + +L + S G V A +G + +KK+
Sbjct: 1 GSQER-PTFYRQELNK---TIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKL 55
Query: 76 IQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLL-----ARVVRPDCDLL 130
+P +S +H K + E+ ++H N++ LL AR + D+
Sbjct: 56 SRPFQS----------IIHAK--RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 131 VYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPAN 190
+ L +I+ + +L I GL+Y+H + IIHRD++P+N
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHVQFLIYQ-----ILRGLKYIHSAD---IIHRDLKPSN 155
Query: 191 VLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
+ +++D E +I +FGL + + T T W A + +QTV DI+S
Sbjct: 156 LAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSV 209
Query: 249 GVLLAVLMMGK--FPSDDFFQHTK 270
G ++A L+ G+ FP D K
Sbjct: 210 GCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 146 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 203 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+Q EII +RH NIV ++ P ++ E+ G L + + + GR D A
Sbjct: 62 NVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDE-A 118
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKQIPNGRTR 216
R + + SG+ Y H +I HRD++ N L+D R I +FG +K +
Sbjct: 119 RF-FFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 171
Query: 217 TTTWSLAETVGYIAPECHQTVALSDK-CDIYSFGVLLAVLMMGKFPSDD 264
+ S T YIAPE K D++S GV L V+++G +P +D
Sbjct: 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 193 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 197
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 198 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 146 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 203 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 245
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 139 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 196 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 193 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 133 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 189
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 190 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 232
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
V+H +V L D V ++ G L Y + + R L+ AR A IAS
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAE-IAS 150
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
L YLH + I++RD++P N+L+D +++FGL K+ N +TT + T Y
Sbjct: 151 ALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFCGTPEY 205
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
+APE D + G +L ++ G P + ++T EM
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF--YSRNTAEM 247
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 112
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 173 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
+++EI ++ H NI+ L P LV E G L D + V +G + +
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI--VEKG-----YYSE 147
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD---DMEARISEFGLAKQIPNGRTR 216
A + LE + H I+HRD++P N+L D +I++FGL+K + +
Sbjct: 148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207
Query: 217 TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDD 264
T + T GY APE + A + D++S G++ +L+ G P D
Sbjct: 208 KT---VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 140 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 197 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 193 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+IA I LE+LH + +IHRD++P+NVLI+ + ++ +FG++ + + +T
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 221 SLAETVG--YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF---FQHTKEM 272
+ I PE +Q S K DI+S G+ + L + +FP D + FQ K++
Sbjct: 215 GCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
GEVY+ ++ G ++ + K+ E+ + E + E + + H+N
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDE------LDFLMEALIISKFNHQN 135
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH---RIARGIASGLE 171
IV + ++ ++ E G L+ L + + LA +AR IA G +
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 172 YLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
YL +H IHRDI N L+ A+I +FG+A+ I V +
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ PE + K D +SFGVLL + +G P
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 157 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 213
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 214 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 256
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
++H +V L A VV + ++ EF GSL D L ++ L L + IA G
Sbjct: 234 LQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEG 290
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
+ ++ + IHRD++ AN+L+ + +I++FGLA+ G W+
Sbjct: 291 MAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV---GAKFPIKWT-------- 336
Query: 230 APECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
APE + + K D++SFG+LL ++ G+ P
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 131 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 188 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 230
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 66 SGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS--EIITAGQVRHRNIVPLLARVV 123
+G ++ IKK+ EP + +++ EI +H NI+ + +
Sbjct: 35 TGEIVAIKKI---------------EPFDKPLFALRTLREIKILKHFKHENIITIF-NIQ 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
RPD F +Q+++ L+ I I L + + H +IH
Sbjct: 79 RPDS---FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQI---------PNGRTRTTTWSLAETVGYIAPECH 234
RD++P+N+LI+ + + ++ +FGLA+ I P G+ ++ T Y APE
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ-QSGMVEFVATRWYRAPEVM 194
Query: 235 QTVA-LSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
T A S D++S G +LA L + + FP D+
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 140 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 197 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 136 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 193 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 130 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 187 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 157
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 158 -----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 210 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 261 PSDDF 265
P D+
Sbjct: 264 PGRDY 268
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 139 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 196 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIAS 168
++H NIV L + LV++ G L +DI+ ++ + + I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQ 111
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTWSLAET 225
LE ++ H I+HRD++P N+L+ + ++++FGLA ++ + + A T
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--DQQAWFGFAGT 169
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 153 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 210 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 252
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 157
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 158 -----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 210 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 261 PSDDF 265
P D+
Sbjct: 264 PGRDY 268
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 131 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 188 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G V++A PG ++ LK EA Q Q E + + N
Sbjct: 61 GRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ---------ADFQREAALMAEFDNPN 111
Query: 115 IVPLLA--RVVRPDCDLLVYEFRRNGSLQDILYDVSQ--------------------GRR 152
IV LL V +P C L++E+ G L + L +S G
Sbjct: 112 IVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 153 ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPN 212
L + IAR +A+G+ YL S R + +HRD+ N L+ ++M +I++FGL++ I +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYL--SER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 213 GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ A + ++ PE + + D++++GV+L
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L + F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA------ 52
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
EI ++ H NIV LL + + LV+EF + L+ + D S L
Sbjct: 53 ----IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASA----LTG 102
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ G
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPV 160
Query: 217 TTTWSLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 154 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 211 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 132 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 188
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 189 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYD-------VSQGR-- 151
++E++T ++H +IV V D ++V+E+ ++G L L +++G
Sbjct: 65 EAELLT--NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 152 RELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
EL IA+ IA+G+ YL H +HRD+ N L+ +++ +I +FG+++ +
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ + ++ PE + + D++S GV+L + GK P
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 54/275 (19%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ G F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 261 PSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSKL 295
P D QW + + PS KL
Sbjct: 226 PGTDHID--------QWNKVIEQLGTPSPEFMKKL 252
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T W A
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 197 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 239
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 6 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 52
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI ++ H NIV LL + + LV+EF + L+ + D S L + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASA----LTGIPLPLI 106
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHE 164
Query: 223 AETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 24 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 70
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ T
Sbjct: 131 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----TDD 177
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------- 161
+ H +V L + ++ E+ NG L + L RE+ RHR
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-------REM----RHRFQTQQLL 108
Query: 162 -IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+ + + +EYL + +HRD+ N L++D ++S+FGL++ + + ++
Sbjct: 109 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165
Query: 221 SLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDF 265
S V + PE S K DI++FGVL+ + +GK P + F
Sbjct: 166 S-KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 24 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 70
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ T
Sbjct: 131 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----TDD 177
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIAS 168
++H NIV L + LV++ G L +DI+ ++ + + I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQ 111
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTWSLAET 225
LE ++ H I+HRD++P N+L+ + ++++FGLA ++ + + A T
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--DQQAWFGFAGT 169
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 68 RVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDC 127
R + IKK+ +P +++ H K + E++ V H+NI+ LL V P
Sbjct: 43 RNVAIKKLSRPFQNQT----------HAK--RAYRELVLMKCVNHKNIISLL-NVFTPQK 89
Query: 128 DL-------LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR 180
L LV E Q I + ELD + + G+++LH +
Sbjct: 90 TLEEFQDVYLVMELMDANLXQVI-------QMELDHERMSYLLYQMLXGIKHLHSAG--- 139
Query: 181 IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV---GYIAPECHQTV 237
IIHRD++P+N+++ D +I +FGLA RT T++ + V Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 238 ALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
+ DI+S G ++ ++ K FP D+
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 20 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 66
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ T
Sbjct: 127 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----TDD 173
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 174 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 61
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 118
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 119 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 170
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 171 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 224
Query: 261 PSDDF 265
P D+
Sbjct: 225 PGRDY 229
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 120
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 121 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 173 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
Query: 261 PSDDF 265
P D+
Sbjct: 227 PGRDY 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIAS 168
++H NIV L + L+++ G L +DI+ ++ + + I
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--------AREYYSEADASHCIQQ 129
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTWSLAET 225
LE + H+ ++HRD++P N+L+ ++ ++++FGLA ++ + + A T
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG--EQQAWFGFAGT 187
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 230
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
+S + + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 120
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 121 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 173 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 226
Query: 261 PSDDF 265
P D+
Sbjct: 227 PGRDY 231
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 88 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 142
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 199
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 200 DMWSLGVIMYILLCGYPP 217
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---ARG 165
++ H +V L + LV+EF +G L D L R + A +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 111
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + + + ++T
Sbjct: 112 VCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 167
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + +PE S K D++SFGVL+ V GK P ++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 94 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 148
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 205
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 206 DMWSLGVIMYILLCGYPP 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 93 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 147
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 204
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 205 DMWSLGVIMYILLCGYPP 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ G F
Sbjct: 172 LA------RTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 261 PSDD 264
P D
Sbjct: 226 PGTD 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 95 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 149
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 206
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 207 DMWSLGVIMYILLCGYPP 224
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 32/253 (12%)
Query: 28 LIEKEDLAFLKKEDCFASLEKIRSCWN-GEVYKAELPGSSGRVITIKKVIQPLKSEAELI 86
L+ + ++ ++K+ F + ++ W + Y + SG ++ I E I
Sbjct: 14 LVPRGSMSLIRKKG-FYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAI 72
Query: 87 KQDSEPLHHKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRN 137
K+ S P ++ ++ E++ ++H N++ LL V P L LV F +
Sbjct: 73 KKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL-DVFTPASSLRNFYDFYLVMPFMQT 131
Query: 138 GSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM 197
LQ I+ + ++ +L + GL+Y+H + ++HRD++P N+ +++D
Sbjct: 132 -DLQKIM-GMEFSEEKIQYLVYQML-----KGLKYIHSAG---VVHRDLKPGNLAVNEDC 181
Query: 198 EARISEFGLAKQIPNGRTR--TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVL 255
E +I +FGLA+ T T W A V +QTV DI+S G ++A +
Sbjct: 182 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV------DIWSVGCIMAEM 235
Query: 256 MMGK--FPSDDFF 266
+ GK F D+
Sbjct: 236 LTGKTLFKGKDYL 248
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 198
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 199 DMWSLGVIMYILLCGYPP 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 103 EIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
E++ Q+ H+ P + R++ + + +LV E G L L R E+
Sbjct: 56 EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNV 112
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTT 219
+ ++ G++YL + +HRD+ NVL+ + A+IS+FGL+K + + T
Sbjct: 113 AELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 169
Query: 220 WSLAE-TVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQHTKEMSFVQ 276
S + + + APEC S + D++S+GV + L G+ P + + M+F++
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK-MKGPEVMAFIE 227
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 133 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 187
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 244
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 245 DMWSLGVIMYILLCGYPP 262
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 43/196 (21%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ + T T
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVAT 214
Query: 226 VGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEM---------S 273
Y APE + + DI+S G ++A L+ G+ FP D +++ S
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAS 274
Query: 274 FVQWM-----RNVMTS--ENPSRTIDSKLIGNG-----YEEQMLLV-----------LKI 310
+ M RN + S + P R IG E+ML++ L
Sbjct: 275 VISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAH 334
Query: 311 ACFCTFDDPEERPNSK 326
F + DP++ P S+
Sbjct: 335 PYFSQYHDPDDEPESE 350
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 103 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 157
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 214
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 215 DMWSLGVIMYILLCGYPP 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 44 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 90
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRT 217
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ T
Sbjct: 151 IYQ-----ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH-----TDD 197
Query: 218 TTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 253
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 200
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 201 DMWSLGVIMYILLCGYPP 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
V E+ G D++Y + Q R + A A IA GL +L II+RD++
Sbjct: 98 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQSKG---IIYRDLKLD 150
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFG 249
NV++D + +I++FG+ K+ N TT T YIAPE D ++FG
Sbjct: 151 NVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFG 208
Query: 250 VLLAVLMMGKFP-----SDDFFQHTKE 271
VLL ++ G+ P D+ FQ E
Sbjct: 209 VLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ G F
Sbjct: 172 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
Query: 261 PSDD 264
P D
Sbjct: 226 PGTD 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 4 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 120
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 121 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ G F
Sbjct: 173 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
Query: 261 PSDD 264
P D
Sbjct: 227 PGTD 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 68 RVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDC 127
R + IKK+ +P +++ H K + E++ V H+NI+ LL V P
Sbjct: 43 RNVAIKKLSRPFQNQT----------HAK--RAYRELVLMKCVNHKNIISLL-NVFTPQK 89
Query: 128 DL-------LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR 180
L LV E Q I + ELD + + G+++LH +
Sbjct: 90 TLEEFQDVYLVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHSAG--- 139
Query: 181 IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV---GYIAPECHQTV 237
IIHRD++P+N+++ D +I +FGLA RT T++ + V Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 238 ALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
+ DI+S G ++ ++ K FP D+
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 68 RVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDC 127
R + IKK+ +P +++ H K + E++ V H+NI+ LL V P
Sbjct: 44 RNVAIKKLSRPFQNQT----------HAK--RAYRELVLMKCVNHKNIISLL-NVFTPQK 90
Query: 128 DL-------LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR 180
L LV E Q I + ELD + + G+++LH +
Sbjct: 91 TLEEFQDVYLVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHSAG--- 140
Query: 181 IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV---GYIAPECHQTV 237
IIHRD++P+N+++ D +I +FGLA RT T++ + V Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 238 ALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
+ DI+S G ++ ++ K FP D+
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 139 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 193
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 250
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 251 DMWSLGVIMYILLCGYPP 268
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 200
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 201 DMWSLGVIMYILLCGYPP 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 54 NGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLHHKMI 98
+ + Y E+ S+ V+ + ++P+ S A+ IK+ S P ++
Sbjct: 1 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 60
Query: 99 QIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILYDVSQ 149
++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI------ 113
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 114 -QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA-- 167
Query: 210 IPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDD 264
RT T++ + V Y APE + + DI+S G ++ ++ K FP D
Sbjct: 168 ----RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
Query: 265 F 265
+
Sbjct: 224 Y 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
++ EII +RH NIV ++ P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKQIPNGRTR 216
R + I SG+ Y +H ++ HRD++ N L+D R I++FG +K
Sbjct: 118 RFFFQQLI-SGVSY---AHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLH 170
Query: 217 TTTWSLAETVGYIAPECHQTVALSDK-CDIYSFGVLLAVLMMGKFPSDD 264
+ S T YIAPE K D++S GV L V+++G +P +D
Sbjct: 171 SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 66 SGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLL-----A 120
SG + IKK+ +P +SE + E L K +Q H N++ LL A
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ------------HENVIGLLDVFTPA 95
Query: 121 RVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
+R D LV F + LQ I+ + ++ +L + GL+Y+H +
Sbjct: 96 SSLRNFYDFYLVMPFMQT-DLQKIM-GLKFSEEKIQYLVYQML-----KGLKYIHSAG-- 146
Query: 180 RIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLAETVGYIAPECHQTV 237
++HRD++P N+ +++D E +I +FGLA+ T T W A V +QTV
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 238 ALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
DI+S G ++A ++ GK F D+
Sbjct: 206 ------DIWSVGCIMAEMLTGKTLFKGKDYL 230
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 126
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 127 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 220
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 126
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 127 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 220
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 110
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 111 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
V E+ G D++Y + Q R + A A IA GL +L II+RD++
Sbjct: 419 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQSKG---IIYRDLKLD 471
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFG 249
NV++D + +I++FG+ K+ N TT T YIAPE D ++FG
Sbjct: 472 NVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFG 529
Query: 250 VLLAVLMMGKFP-----SDDFFQHTKE 271
VLL ++ G+ P D+ FQ E
Sbjct: 530 VLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 5 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 121
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 122 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 173
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ G F
Sbjct: 174 LA------RTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
Query: 261 PSDD 264
P D
Sbjct: 228 PGTD 231
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + DI+S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 124
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 125 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 182 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 61 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 116
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 117 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 110
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 111 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 4 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKI--RLDTETEGVPSTA----------IR 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI--LYDVSQGRRELDWLARH 160
EI ++ H NIV LL + + LV+E QD+ D S L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH----QDLKTFMDASA----LTGIPLP 102
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
I + L+ L H R++HRD++P N+LI+ + ++++FGLA+ RT T
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTH 161
Query: 221 SLAETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 162 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 51 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 106
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 107 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 200
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 95 HKMIQIQSEIITAGQVR-HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRE 153
H ++ E+ T Q + ++NI+ L+ LV+E + GS IL + Q ++
Sbjct: 52 HSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHI-QKQKH 107
Query: 154 LDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAK-- 208
+ R+ R +A+ L++LH I HRD++P N+L + + +I +F L
Sbjct: 108 FNEREASRVVRDVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGM 164
Query: 209 QIPNGRTRTTTWSLAETVG---YIAPE-----CHQTVALSDKCDIYSFGVLLAVLMMGKF 260
++ N T TT L G Y+APE Q +CD++S GV+L +++ G
Sbjct: 165 KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
Query: 261 P 261
P
Sbjct: 225 P 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 49 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 104
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 105 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 162 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 198
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
V E+ G D+++ + + R+ + AR A I+ L YLH II+RD++
Sbjct: 129 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 181
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
NVL+D + +++++G+ K+ R TT + T YIAPE + D ++
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239
Query: 249 GVLLAVLMMGKFPSD 263
GVL+ +M G+ P D
Sbjct: 240 GVLMFEMMAGRSPFD 254
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I ++GLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GL+Y+H + IIHRD++P+N+ +++D E +I +FGLA+ T T
Sbjct: 157 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH-----TDDEMXGYVAT 208
Query: 226 VGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
Y APE + + DI+S G ++A L+ G+ FP D K
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---ARG 165
++ H +V L + LV+EF +G L D L R + A +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 111
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + + + ++T
Sbjct: 112 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 167
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + +PE S K D++SFGVL+ V GK P ++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 33/196 (16%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILYDVSQGRRELD 155
E++ V H+NI+ LL V P L LV E Q I ELD
Sbjct: 71 ELVLLKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI-------HMELD 122
Query: 156 WLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRT 215
+ + G+++LH + IIHRD++P+N+++ D +I +FGLA RT
Sbjct: 123 HERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA------RT 173
Query: 216 RTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
+T + + V Y APE + + DI+S G ++ L+ G FQ T +
Sbjct: 174 ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV----IFQGTDHI 229
Query: 273 SFVQWMRNVMTSENPS 288
QW + + PS
Sbjct: 230 D--QWNKVIEQLGTPS 243
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ QV H N++ L +L+ E G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQIPNGR 214
+ I G+ YLH +I H D++P N+++ D ++ +FGLA +I +G
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP------------- 261
+ E ++APE L + D++S GV+ +L+ G P
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 262 -------SDDFFQHTKEMSFVQWMRNVMTSENPSR 289
++FF T E++ ++R ++ E R
Sbjct: 231 TAVSYDFDEEFFSQTSELA-KDFIRKLLVKETRKR 264
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
++ EII +RH NIV ++ P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKQIPNGRTR 216
R + I SG+ Y H ++ HRD++ N L+D R I +FG +K +
Sbjct: 118 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 170
Query: 217 TTTWSLAETVGYIAPECHQTVALSDK-CDIYSFGVLLAVLMMGKFPSDD 264
+ S T YIAPE K D++S GV L V+++G +P +D
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L ED + + ++ G+VYKA+ +S V+ KVI KSE EL
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETS--VLAAAKVID-TKSEEEL--------EDY 81
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
M++I H NIV LL + ++ EF G++ ++ ++ +
Sbjct: 82 MVEID----ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
L +I L+ L+ H +IIHRD++ N+L D + ++++FG++ + N RT
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTI 189
Query: 217 TTTWSLAETVGYIAPECHQTVALSD-----KCDIYSFGVLL 252
S T ++APE D K D++S G+ L
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I FGLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
++ EII +RH NIV ++ P +V E+ G L + + + GR D A
Sbjct: 60 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKQIPNGRTR 216
R + I SG+ Y H ++ HRD++ N L+D R I +FG +K +
Sbjct: 117 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 169
Query: 217 TTTWSLAETVGYIAPECHQTVALSDK-CDIYSFGVLLAVLMMGKFPSDD 264
+ S T YIAPE K D++S GV L V+++G +P +D
Sbjct: 170 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---ARG 165
++ H +V L + LV+EF +G L D L R + A +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 114
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + + + ++T
Sbjct: 115 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 170
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + +PE S K D++SFGVL+ V GK P ++
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQV-RHR 113
G+V A G S ++I+ ++ LK +A+ ++++ + SE+ Q+ H
Sbjct: 59 GKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA---------LMSELKMMTQLGSHE 109
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ--GRRELDWLARHRI--------- 162
NIV LL L++E+ G L + L + E+++ + R+
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 163 --------ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
A +A G+E+L +HRD+ NVL+ +I +FGLA+ I +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ V ++APE + K D++S+G+LL
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHR 113
G+V +A G +K ++ LKS A ++++ + SE+ I + +H
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 110
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR------------ 161
NIV LL L++ E+ G L + L E + H
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ +A G+ +L + IHRD+ NVL+ + A+I +FGLA+ I N +
Sbjct: 171 FSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 222 LAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQ 276
V ++APE + + D++S+G+LL + +G P ++K V+
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---ARG 165
++ H +V L + LV+EF +G L D L R + A +
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 109
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + + + ++T
Sbjct: 110 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 165
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + +PE S K D++SFGVL+ V GK P ++
Sbjct: 166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---ARG 165
++ H +V L + LV+EF +G L D L R + A +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 131
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + + + ++T
Sbjct: 132 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 187
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + +PE S K D++SFGVL+ V GK P ++
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ QV H N++ L +L+ E G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQIPNGR 214
+ I G+ YLH +I H D++P N+++ D ++ +FGLA +I +G
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP------------- 261
+ E ++APE L + D++S GV+ +L+ G P
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 262 -------SDDFFQHTKEMSFVQWMRNVMTSENPSR 289
++FF T E++ ++R ++ E R
Sbjct: 231 TAVSYDFDEEFFSQTSELA-KDFIRKLLVKETRKR 264
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+V K + A++I+ SE I ++ EI+ H IV LL
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI-VEIEIL--ATCDHPYIVKLLGAYY 78
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
++ EF G++ I+ ++ +G L +I LE L+ H RIIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD-- 241
RD++ NVL+ + + R+++FG++ + N +T S T ++APE + D
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 242 ---KCDIYSFGVLL 252
K DI+S G+ L
Sbjct: 191 YDYKADIWSLGITL 204
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 468
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 469 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 217 TTTWSLAE-TVGYIAPECHQTVALSDKCDIYSFGVLL 252
+ + V + APEC S K D++SFGVL+
Sbjct: 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 562
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 8 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 124
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 125 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 176
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + D++S G ++ ++ K F
Sbjct: 177 LA------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 230
Query: 261 PSDDF 265
P D+
Sbjct: 231 PGRDY 235
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL--YDVSQGRRELD 155
IQI ++ V R + L ++ D LL E+ G L+ L ++ G +E
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG- 121
Query: 156 WLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPN 212
+ I+S L YLH + RIIHRD++P N+++ + +I + G AK++
Sbjct: 122 --PIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
Query: 213 GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
G T T+ Y+APE + + D +SFG L + G P +Q
Sbjct: 177 GELCT---EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP---- 229
Query: 273 SFVQWMRNVMTSENPSRTIDSKLIG 297
VQW V N + L G
Sbjct: 230 --VQWHGKVREKSNEHIVVYDDLTG 252
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 64 GSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVV 123
G+ G+V K + A++I+ SE I ++ EI+ H IV LL
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI-VEIEIL--ATCDHPYIVKLLGAYY 86
Query: 124 RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
++ EF G++ I+ ++ +G L +I LE L+ H RIIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD-- 241
RD++ NVL+ + + R+++FG++ + N +T S T ++APE + D
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 242 ---KCDIYSFGVLL 252
K DI+S G+ L
Sbjct: 199 YDYKADIWSLGITL 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVV---RPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ E++ V + P + R++ + +LV E G L L Q R +
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL----QQNRHVKD 469
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
+ ++ G++YL S+ +HRD+ NVL+ A+IS+FGL+K +
Sbjct: 470 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL----RA 522
Query: 217 TTTWSLAETVG-----YIAPECHQTVALSDKCDIYSFGVLL 252
+ A+T G + APEC S K D++SFGVL+
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 563
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDIL--YDVSQGRRELD 155
IQI ++ V R + L ++ D LL E+ G L+ L ++ G +E
Sbjct: 64 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG- 122
Query: 156 WLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPN 212
+ I+S L YLH + RIIHRD++P N+++ + +I + G AK++
Sbjct: 123 --PIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
Query: 213 GRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEM 272
G T T+ Y+APE + + D +SFG L + G P +Q
Sbjct: 178 GELCT---EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP---- 230
Query: 273 SFVQWMRNVMTSENPSRTIDSKLIG 297
VQW V N + L G
Sbjct: 231 --VQWHGKVREKSNEHIVVYDDLTG 253
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
V E+ G D+++ + + R+ + AR A I+ L YLH II+RD++
Sbjct: 97 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 149
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
NVL+D + +++++G+ K+ R TT T YIAPE + D ++
Sbjct: 150 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 207
Query: 249 GVLLAVLMMGKFPSD 263
GVL+ +M G+ P D
Sbjct: 208 GVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
V E+ G D+++ + + R+ + AR A I+ L YLH II+RD++
Sbjct: 82 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 134
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
NVL+D + +++++G+ K+ R TT T YIAPE + D ++
Sbjct: 135 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 192
Query: 249 GVLLAVLMMGKFPSD 263
GVL+ +M G+ P D
Sbjct: 193 GVLMFEMMAGRSPFD 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S TV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S TV Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 46/245 (18%)
Query: 50 RSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLH 94
RS + Y E+ S+ V+ + ++P+ S A+ IK+ S P
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 95 HKMIQIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILY 145
++ ++ E++ V H+NI+ LL V P L +V E Q I
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVI-- 119
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
+ ELD + + G+++LH + IIHRD++P+N+++ D +I +FG
Sbjct: 120 -----QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 206 LAKQIPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--F 260
LA RT T++ + V Y APE + + D++S G ++ ++ K F
Sbjct: 172 LA------RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 225
Query: 261 PSDDF 265
P D+
Sbjct: 226 PGRDY 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 95
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 50/262 (19%)
Query: 54 NGEVYKAELPGSSGRVITIKKVIQPLKSEAE---------------LIKQDSEPLHHKMI 98
+ + Y E+ S+ V+ + ++P+ S A+ +K+ S P ++
Sbjct: 7 DNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 66
Query: 99 QIQS--EIITAGQVRHRNIVPLLARVVRPDCDL-------LVYEFRRNGSLQDILYDVSQ 149
++ E++ V H+NI+ LL V P L LV E Q I
Sbjct: 67 AKRAYRELVLLKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVI------ 119
Query: 150 GRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ 209
ELD + + G+++LH + IIHRD++P+N+++ D +I +FGLA
Sbjct: 120 -HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA-- 173
Query: 210 IPNGRTRTTTWSLAETV---GYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFF 266
RT T + + V Y APE + + DI+S G ++ L+ G F
Sbjct: 174 ----RTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCV----IF 225
Query: 267 QHTKEMSFVQWMRNVMTSENPS 288
Q T + QW + + PS
Sbjct: 226 QGTDHID--QWNKVIEQLGTPS 245
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
++ EII +RH NIV ++ P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAKQIPNGRTR 216
R + I SG+ Y H ++ HRD++ N L+D R I FG +K +
Sbjct: 118 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLH 170
Query: 217 TTTWSLAETVGYIAPECHQTVALSDK-CDIYSFGVLLAVLMMGKFPSDD 264
+ S T YIAPE K D++S GV L V+++G +P +D
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S TV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 86
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 147 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S TV Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S TV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQP 188
V E+ G D+++ + + R+ + AR A I+ L YLH II+RD++
Sbjct: 86 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERG---IIYRDLKL 138
Query: 189 ANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSF 248
NVL+D + +++++G+ K+ R TT T YIAPE + D ++
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 196
Query: 249 GVLLAVLMMGKFPSD 263
GVL+ +M G+ P D
Sbjct: 197 GVLMFEMMAGRSPFD 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 86
Query: 118 LLARVVRPDCDLLVY-EFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 147 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S TV Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSL-QDILYDVSQGRRELDWLARHRIARGIAS 168
++H NIV L + L+++ G L +DI+ ++ + + I
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--------AREYYSEADASHCIQQ 118
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEA---RISEFGLAKQIPNGRTRTTTWSLAET 225
LE + H+ ++HR+++P N+L+ ++ ++++FGLA ++ + + A T
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG--EQQAWFGFAGT 176
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQH 268
GY++PE + D+++ GV+L +L++G P D QH
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+I+ E+ QV H NI+ L +L+ E G L D L + L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM----EARISEFGLAKQIPNGR 214
+ I G+ YLH +I H D++P N+++ D ++ +FGLA +I +G
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV 173
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP------------- 261
+ E ++APE L + D++S GV+ +L+ G P
Sbjct: 174 EFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI 230
Query: 262 -------SDDFFQHTKEMSFVQWMRNVMTSENPSR 289
++FF T E++ ++R ++ E R
Sbjct: 231 TAVSYDFDEEFFSQTSELA-KDFIRKLLVKETRKR 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
V E+ G D++Y + Q + + A A I+ GL +LH + II+RD++
Sbjct: 97 FVMEYVNGG---DLMYHIQQVGKFKEPQAVFYAAE-ISIGLFFLH---KRGIIYRDLKLD 149
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFG 249
NV++D + +I++FG+ K+ + TT T YIAPE D +++G
Sbjct: 150 NVMLDSEGHIKIADFGMCKE--HMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYG 207
Query: 250 VLLAVLMMGKFPSD 263
VLL ++ G+ P D
Sbjct: 208 VLLYEMLAGQPPFD 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 68 RVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDC 127
R + IKK+ +P +++ H K + E++ V H+NI+ LL V P
Sbjct: 44 RNVAIKKLSRPFQNQT----------HAK--RAYRELVLMKCVNHKNIIGLL-NVFTPQK 90
Query: 128 DL-------LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPR 180
L +V E Q I + ELD + + G+++LH +
Sbjct: 91 SLEEFQDVYIVMELMDANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHSAG--- 140
Query: 181 IIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV---GYIAPECHQTV 237
IIHRD++P+N+++ D +I +FGLA RT T++ + V Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 238 ALSDKCDIYSFGVLLAVLMMGK--FPSDDF 265
+ D++S G ++ ++ K FP D+
Sbjct: 195 GYKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
F +EKI G VYKA +G V+ +KK+ L +E E + +
Sbjct: 8 FQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKIR--LDTETEGVPSTA----------IR 54
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI ++ H NIV LL + + LV+E + L+ + D S L + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFE-HVDQDLKKFM-DASA----LTGIPLPLI 108
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
+ L+ L H R++HRD++P N+LI+ + ++++FGLA+ G T
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHE 166
Query: 223 AETVGYIAPECHQTVA-LSDKCDIYSFGVLLAVLMMGK--FPSD 263
T+ Y APE S DI+S G + A ++ + FP D
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 133 CLLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDV 187
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK+ + + TT T Y+APE C
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP---CYTPYYVAPEVLGPEKYDKSC 244
Query: 244 DIYSFGVLLAVLMMGKFP 261
D +S GV+ +L+ G P
Sbjct: 245 DXWSLGVIXYILLCGYPP 262
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 28/138 (20%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAK 208
+ R IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K
Sbjct: 120 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 209 QIPNGRT--RTTTWSLAETVGYIAPECHQTVA-------LSDKCDIYSFG-VLLAVLMMG 258
++ +G++ RT + + T G+ APE + L+ DI+S G V +L G
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 259 KFPSDDFFQHTKEMSFVQ 276
K P D ++++E + ++
Sbjct: 237 KHPFGD--KYSRESNIIR 252
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+IA I LE+LH + +IHRD++P+NVLI+ + ++ +FG++ + + +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 221 SLAETVG--YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF---FQHTKEM 272
+ I PE +Q S K DI+S G+ + L + +FP D + FQ K++
Sbjct: 171 GCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
Q++ EI + H NI+ L L+ E+ G L Y Q D
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQR 124
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
I +A L Y H ++IHRDI+P N+L+ E +I++FG + P+ R +T
Sbjct: 125 TATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT- 180
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
+ T+ Y+ PE + ++K D++ GVL L++G P
Sbjct: 181 ---MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 108/245 (44%), Gaps = 45/245 (18%)
Query: 65 SSGRVITIKKVIQ-PLKSEAEL-IKQDSEPLHH-KMIQIQSEIITAGQVRHRNIVPLLAR 121
S+G + IKKVIQ P EL I QD LHH ++Q+QS T G+ R+I +
Sbjct: 46 STGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVM 105
Query: 122 VVRPDC--DLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRP 179
PD +RR + IL V ++ R I LH+
Sbjct: 106 EYVPDTLHRCCRNYYRRQVAPPPILIKV----------FLFQLIRSIGC----LHLPSV- 150
Query: 180 RIIHRDIQPANVLIDD-DMEARISEFGLAKQI----PNGRTRTTTWSLAETVGYIAPEC- 233
+ HRDI+P NVL+++ D ++ +FG AK++ PN + + Y APE
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-------YRAPELI 203
Query: 234 ----HQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQWM--RNVMTSE 285
H T A+ DI+S G + A +M+G+ F D+ E+ V R V+
Sbjct: 204 FGNQHYTTAV----DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 286 NPSRT 290
NPS T
Sbjct: 260 NPSHT 264
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 103 EIITAGQVRHRNIVPLLAR---VVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
E++ Q+ H+ P + R V + + +LV E G L L R E+
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNV 438
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTT 219
+ ++ G++YL + +HR++ NVL+ + A+IS+FGL+K + + T
Sbjct: 439 AELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495
Query: 220 WSLAE-TVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQHTKEMSFVQ 276
S + + + APEC S + D++S+GV + L G+ P + + M+F++
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK-MKGPEVMAFIE 553
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 95
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 38/177 (21%)
Query: 167 ASGLEYLHMSHRPRIIHRDIQPANVLID-----DDMEARISEFGLAKQIPNGRTRTTTWS 221
SGL +LH + I+HRD++P N+LI ++A IS+FGL K++ GR + S
Sbjct: 128 TSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 222 -LAETVGYIAPECHQTVALSDKC--------DIYSFG-VLLAVLMMGKFPSDDFFQHTKE 271
+ T G+IAPE LS+ C DI+S G V V+ G P Q
Sbjct: 185 GVPGTEGWIAPE-----MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 272 MSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDV 328
+ + + E I +LI E+M+ + DP++RP++K V
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELI-----EKMIAM----------DPQKRPSAKHV 281
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 75 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 132
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 193 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 86
Query: 118 LLARVVRPDCDLLVY-EFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 147 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 95
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAE---TVGYIAPECHQTVALS 240
+P N+L + ++++FG AK+ T+ SL E T Y+APE
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAKET------TSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 241 DKCDIYSFGVLLAVLMMGKFP 261
CD++S GV++ +L+ G P
Sbjct: 196 KSCDMWSLGVIMYILLCGYPP 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 36/237 (15%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ +L + S G V A +G + +KK+ +P +S +H K +
Sbjct: 24 YQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRPFQS----------IIHAK--RTYR 70
Query: 103 EIITAGQVRHRNIVPLL-----ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
E+ ++H N++ LL AR + D+ + L +I+ + +L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 158 ARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR- 216
I GL+Y+H + IIHRD++P+N+ +++D E +I +F LA+ + T
Sbjct: 131 IYQ-----ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY 182
Query: 217 -TTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
T W A + +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 86
Query: 118 LLARVVRPDCDLLVY-EFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y V+ D+L H I
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 147 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ L+YL RIIHRD++P N+L+D+ I++F +A +P T+ TT +A T
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT--MAGT 177
Query: 226 VGYIAPECHQT---VALSDKCDIYSFGVLLAVLMMGKFP 261
Y+APE + S D +S GV L+ G+ P
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAK 208
+ R IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K
Sbjct: 138 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 209 QIPNGRT--RTTTWSLAETVGYIAPECHQTVA---LSDKCDIYSFG-VLLAVLMMGKFPS 262
++ +G+ R + + T G+ APE + L+ DI+S G V +L GK P
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 263 DDFFQHTKEMSFVQ 276
D ++++E + ++
Sbjct: 255 GD--KYSRESNIIR 266
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAK 208
+ R IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K
Sbjct: 138 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 209 QIPNGRT--RTTTWSLAETVGYIAPECHQTVA---LSDKCDIYSFG-VLLAVLMMGKFPS 262
++ +G+ R + + T G+ APE + L+ DI+S G V +L GK P
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 263 DDFFQHTKEMSFVQ 276
D ++++E + ++
Sbjct: 255 GD--KYSRESNIIR 266
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I + GLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI---ARG 165
++ H +V L + LV EF +G L D L R + A +
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL------RTQRGLFAAETLLGMCLD 112
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+ G+ YL +IHRD+ N L+ ++ ++S+FG+ + + + + ++T
Sbjct: 113 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFP 168
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDD 264
V + +PE S K D++SFGVL+ V GK P ++
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 28/221 (12%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L ED + + ++ G+VYKA+ +S V+ KVI KSE EL
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETS--VLAAAKVID-TKSEEEL--------EDY 81
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
M++I H NIV LL + ++ EF G++ ++ ++ +
Sbjct: 82 MVEID----ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
L +I L+ L+ H +IIHRD++ N+L D + ++++FG++ + N R
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXI 189
Query: 217 TTTWSLAETVGYIAPECHQTVALSD-----KCDIYSFGVLL 252
S T ++APE D K D++S G+ L
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCD----LLVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A ++ L+ ++ NGSL D L + LD
Sbjct: 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDA 133
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI- 210
+ ++A SGL +LH +P I HRD++ N+L+ + I++ GLA +
Sbjct: 134 KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI 193
Query: 211 ---------PNGRTRTTTWSLAETVGYIAPECH-QTVALSDKCDIYSFGVLL 252
PN R T + E + H Q+ ++ D+YSFG++L
Sbjct: 194 SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA---DMYSFGLIL 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY---DVSQGRREL 154
++ E + + H ++V LL + P L V + +G L + ++ D + L
Sbjct: 62 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLL 120
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
+W + IA G+ YL R++HRD+ NVL+ +I++FGLA+ +
Sbjct: 121 NWCVQ------IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A EC + + D++S+GV + LM G P D
Sbjct: 172 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 45/249 (18%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHR 113
G+V +A G +K ++ LKS A ++++ + SE+ I + +H
Sbjct: 45 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA---------LMSELKIMSHLGQHE 95
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARG-------- 165
NIV LL L++ E+ G L + L RR+ + + +A G
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFL------RRKAEAMLGPSLAPGQDPEGLDK 149
Query: 166 -----------------IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
+A G+ +L + IHRD+ NVL+ + A+I +FGLA+
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQ 267
I N + V ++APE + + D++S+G+LL + +G P
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 266
Query: 268 HTKEMSFVQ 276
++K V+
Sbjct: 267 NSKFYKLVK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY---DVSQGRREL 154
++ E + + H ++V LL + P L V + +G L + ++ D + L
Sbjct: 85 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLL 143
Query: 155 DWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGR 214
+W + IA G+ YL R++HRD+ NVL+ +I++FGLA+ +
Sbjct: 144 NWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
Query: 215 TRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A EC + + D++S+GV + LM G P D
Sbjct: 195 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I + GLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR--TTTWSLA 223
I GL+Y+H + IIHRD++P+N+ +++D E +I + GLA+ + T T W A
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRA 190
Query: 224 ETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTK 270
+ +QTV DI+S G ++A L+ G+ FP D K
Sbjct: 191 PEIMLNWMHYNQTV------DIWSVGCIMAELLTGRTLFPGTDHIDQLK 233
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLA 158
++ EII +RH NIV ++ P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR--ISEFGLAK-QIPNGRT 215
R + I SG+ Y H ++ HRD++ N L+D R I FG +K + + +
Sbjct: 118 RFFFQQLI-SGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDK-CDIYSFGVLLAVLMMGKFPSDD 264
+ T T YIAPE K D++S GV L V+++G +P +D
Sbjct: 174 KDTVG----TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 174 HMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
H+ +IIHRDI+P+N+L+D ++ +FG++ Q+ + +T A Y+APE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAPER 196
Query: 234 HQTVA----LSDKCDIYSFGVLLAVLMMGKFP 261
A + D++S G+ L L G+FP
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 115
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 173 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFV 275
+ E ++APE L + D++S GV+ +L+ G P F TK+ +
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQETLA 227
Query: 276 Q 276
Sbjct: 228 N 228
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 115
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 173 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 222
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ T ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFG---TPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ T S V Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQ-DILYDVSQGRRELDWLARHRIARGIAS 168
++H +IV LL +V+EF L +I+ G + +A H + R I
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM-RQILE 143
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
L Y H ++ IIHRD++P VL+ ++ ++ FG+A Q+ G + T
Sbjct: 144 ALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGT 198
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
++APE + D++ GV+L +L+ G P F TKE F
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP----FYGTKERLF 243
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 42/188 (22%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+PLH EI ++H+NIV L F NG ++ + V
Sbjct: 63 SQPLHE-------EIALHKHLKHKNIVQYLG------------SFSENGFIKIFMEQVPG 103
Query: 150 GRRELDWLARHR-------------IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD 196
G L L R + + I GL+YLH + +I+HRDI+ NVLI+
Sbjct: 104 G--SLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTY 158
Query: 197 MEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC--HQTVALSDKCDIYSFGVLLA 253
+IS+FG +K++ T T++ T+ Y+APE DI+S G +
Sbjct: 159 SGVLKISDFGTSKRLAGINPCTETFT--GTLQYMAPEIIDKGPRGYGKAADIWSLGCTII 216
Query: 254 VLMMGKFP 261
+ GK P
Sbjct: 217 EMATGKPP 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 95
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDILYDVSQGRREL--------DWLA-RHRIARG-- 165
LL +P L+V EF + G+L L R E D+L H I
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYL---RSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 153 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 110 VRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQ-DILYDVSQGRRELDWLARHRIARGIAS 168
++H +IV LL +V+EF L +I+ G + +A H + R I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM-RQILE 141
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
L Y H ++ IIHRD++P VL+ ++ ++ FG+A Q+ G + T
Sbjct: 142 ALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGT 196
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
++APE + D++ GV+L +L+ G P F TKE F
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP----FYGTKERLF 241
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 96 KMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELD 155
K+ ++ EI +V H NI+ +L LV E ++GS D+ + + R +
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDE 129
Query: 156 WLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRT 215
LA + I R + S + YL + IIHRDI+ N++I +D ++ +FG A + G+
Sbjct: 130 PLASY-IFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK- 184
Query: 216 RTTTWSLAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGKFP 261
++ T+ Y APE + +++S GV L L+ + P
Sbjct: 185 --LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I+ E+ +++H N++ L +L+ E G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEA 116
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDD----DMEARISEFGLAKQIPNGRT 215
+ I +G+ YLH +I H D++P N+++ D +I +FGLA +I G
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 216 RTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKE 271
+ E ++APE L + D++S GV+ +L+ G P F TK+
Sbjct: 174 FKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP---FLGDTKQ 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYI 229
LE +H H+ I+H D++PAN LI D M ++ +FG+A Q+ S TV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 230 APECHQTVALSDK-----------CDIYSFGVLLAVLMMGKFP 261
PE + ++ S + D++S G +L + GK P
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 47 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 105
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 106 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 206
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 79 LKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCD-----LLVYE 133
LK + +K D+ ++ + SE H N++ LL + +++
Sbjct: 63 LKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP 121
Query: 134 FRRNGSLQD-ILYD-VSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANV 191
F + G L +LY + G + + + IA G+EYL S+R +HRD+ N
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNR-NFLHRDLAARNC 178
Query: 192 LIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVL 251
++ DDM +++FGL+K+I +G V +IA E + K D+++FGV
Sbjct: 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 252 L 252
+
Sbjct: 239 M 239
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 95
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL----------YDVSQGRRELDWLARHRIARGI 166
LL +P L+V EF + G+L L D+ + L+ L + +
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ--V 153
Query: 167 ASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETV 226
A G+E+L + IHRD+ N+L+ + +I +FGLA+ I +
Sbjct: 154 AKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 227 GYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
++APE + + D++SFGVLL + +G P
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 35 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 93
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 94 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 194
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 38 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 96
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 97 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 197
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HRD+ N ++ D +I +FG+ + I V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HRD+ N ++ D +I +FG+ + I V
Sbjct: 138 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVL 219
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HRD+ N ++ D +I +FG+ + I V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
++ I L YL H +IHRD++P+N+L+D+ + ++ +FG++ ++ + + + +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 221 SLAETVGYIAPE----CHQTVALSD-KCDIYSFGVLLAVLMMGKFP 261
A Y+APE T D + D++S G+ L L G+FP
Sbjct: 185 --AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 46 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 104
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 105 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q H NIV L+ + +V E + G L ++G R L ++ A+
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQMVGDAAA 224
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+EYL IHRD+ N L+ + +IS+FG++++ +G + V +
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW 281
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFF-QHTKEM 272
APE S + D++SFG+LL +G P + Q T+E
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYD--- 146
S+PLH EI ++H+NIV L + E GSL +L
Sbjct: 49 SQPLH-------EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG 101
Query: 147 -VSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA-RISEF 204
+ + + + + I GL+YLH + +I+HRDI+ NVLI+ +IS+F
Sbjct: 102 PLKDNEQTIGFYTKQ-----ILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDF 153
Query: 205 GLAKQIPNGRTRTTTWSLAETVGYIAPEC--HQTVALSDKCDIYSFGVLLAVLMMGKFP 261
G +K++ T T++ T+ Y+APE DI+S G + + GK P
Sbjct: 154 GTSKRLAGINPCTETFT--GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 42 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 100
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 101 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 201
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 53 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 111
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 112 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 212
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G+VYKA+ +S V+ KVI KSE EL M++I H N
Sbjct: 24 GKVYKAQNKETS--VLAAAKVID-TKSEEEL--------EDYMVEID----ILASCDHPN 68
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
IV LL + ++ EF G++ ++ ++ + L +I L+ L+
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------LTESQIQVVCKQTLDALN 122
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW-SLAETVGYIAPEC 233
H +IIHRD++ N+L D + ++++FG++ + N RT S T ++APE
Sbjct: 123 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEV 180
Query: 234 HQTVALSD-----KCDIYSFGVLL 252
D K D++S G+ L
Sbjct: 181 VMCETSKDRPYDYKADVWSLGITL 204
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 39 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 97
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 98 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 198
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 46 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 104
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 105 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G + + Y APE
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 205
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 40 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 97
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDILY------------DVSQGRRELDWLARHRIAR 164
LL +P L+V EF + G+L L D+ + L+ L +
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ- 156
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 157 -VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 62 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 120
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 121 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 221
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 37 LKKEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHK 96
L ED + + ++ G+VYKA+ +S V+ KVI KSE EL
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETS--VLAAAKVID-TKSEEEL--------EDY 81
Query: 97 MIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDW 156
M++I H NIV LL + ++ EF G++ ++ ++ +
Sbjct: 82 MVEID----ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
L +I L+ L+ H +IIHRD++ N+L D + ++++FG++ + N R
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXI 189
Query: 217 TTTWSLAETVGYIAPECHQTVALSD-----KCDIYSFGVLL 252
T ++APE D K D++S G+ L
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 68 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 127 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 227
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 39 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 96
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLARHRIARG-- 165
LL +P L+V EF + G+L L Y + + H I
Sbjct: 97 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQ 156
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 157 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 109 QVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS 168
Q H NIV L+ + +V E + G L ++G R L ++ A+
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQMVGDAAA 224
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
G+EYL IHRD+ N L+ + +IS+FG++++ +G + V +
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW 281
Query: 229 IAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFF-QHTKEM 272
APE S + D++SFG+LL +G P + Q T+E
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQT 236
H+ +HRDI+P NVL+D + R+++FG ++ + T ++ ++ T YI+PE Q
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVG-TPDYISPEILQA 266
Query: 237 V-----ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTI 291
+ +CD +S GV + ++ G+ P F+ + ++ + M + + PS
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETP---FYAESLVETYGKIMNHEERFQFPSHVT 323
Query: 292 DSKLIGNGYEEQMLLVLKIAC 312
D EE L+ ++ C
Sbjct: 324 DVS------EEAKDLIQRLIC 338
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 70 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 128
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 129 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 229
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 68 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 127 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G + + Y APE
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 227
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 112 HRNIVPLLARVVRPDCD----LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIAR--- 164
H NI+ L+A +R L+ F + G+L + ++ + + + ++L +I
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN---EIERLKDKGNFLTEDQILWLLL 141
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ----IPNGRTRTTTW 220
GI GLE +H HRD++P N+L+ D+ + + + G Q + R T
Sbjct: 142 GICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198
Query: 221 SLAE---TVGYIAPE---CHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
A T+ Y APE + ++ D++S G +L +M G+ P D FQ
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 28/138 (20%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLID-------------DDMEARISEFGLAK 208
+ R IASG+ +LH +IIHRD++P N+L+ +++ IS+FGL K
Sbjct: 120 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 209 QIPNGRT--RTTTWSLAETVGYIAPECHQTVA-------LSDKCDIYSFG-VLLAVLMMG 258
++ +G+ R + + T G+ APE + L+ DI+S G V +L G
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 259 KFPSDDFFQHTKEMSFVQ 276
K P D ++++E + ++
Sbjct: 237 KHPFGD--KYSRESNIIR 252
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 72 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 130
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 131 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 231
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 113 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 171
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 172 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 272
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 64 GSSGRVIT-----IKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEI-ITAGQVRHRNIVP 117
G+ G+VI I K +++K+ + H+ + + +I I G H N+V
Sbjct: 40 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLNVVN 97
Query: 118 LLARVVRPDCDLLV-YEFRRNGSLQDIL---------YDVSQGRRELDWLA-RHRIARG- 165
LL +P L+V EF + G+L L Y + D+L H I
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 166 -IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE 224
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 158 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 225 TVGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQT 236
H+ +HRDI+P NVL+D + R+++FG ++ + T ++ ++ T YI+PE Q
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVG-TPDYISPEILQA 250
Query: 237 V-----ALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTI 291
+ +CD +S GV + ++ G+ P F+ + ++ + M + + PS
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETP---FYAESLVETYGKIMNHEERFQFPSHVT 307
Query: 292 DSKLIGNGYEEQMLLVLKIAC 312
D EE L+ ++ C
Sbjct: 308 DVS------EEAKDLIQRLIC 322
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE- 224
+A G+EYL + +HRD+ N ++D+ ++++FGLA+ I + +
Sbjct: 133 VARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 225 -TVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMT 283
V + A E QT + K D++SFGVLL L+ P ++H ++
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP---YRHIDPFDLTHFLAQGRR 246
Query: 284 SENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQI 335
P DS + ++ C DP RP + + + QI
Sbjct: 247 LPQPEYCPDS-------------LYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HRD+ N ++ D +I +FG+ + I V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCD----LLVYEFRRNGSLQDILYDVSQGRRELDW 156
++E+ +RH NI+ +A + L+ + GSL D L + LD
Sbjct: 50 ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDT 104
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLA---- 207
++ RI IASGL +LH+ +P I HRD++ N+L+ + + I++ GLA
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
Query: 208 ---KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD------KCDIYSFGVLL 252
Q+ G T Y+APE D + DI++FG++L
Sbjct: 165 QSTNQLDVGNN-----PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCD----LLVYEFRRNGSLQDILYDVSQGRRELDW 156
++E+ +RH NI+ +A + L+ + GSL D L + LD
Sbjct: 50 ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDT 104
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLA---- 207
++ RI IASGL +LH+ +P I HRD++ N+L+ + + I++ GLA
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
Query: 208 ---KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD------KCDIYSFGVLL 252
Q+ G T Y+APE D + DI++FG++L
Sbjct: 165 QSTNQLDVGNN-----PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V P+ VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV-PET---VYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE- 232
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 233 CHQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCD----LLVYEFRRNGSLQDILYDVSQGRRELDW 156
++E+ +RH NI+ +A + L+ + GSL D L + LD
Sbjct: 79 ETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDT 133
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLA---- 207
++ RI IASGL +LH+ +P I HRD++ N+L+ + + I++ GLA
Sbjct: 134 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 193
Query: 208 ---KQIPNGRTRTTTWSLAETVGYIAPECHQTVALSD------KCDIYSFGVLL 252
Q+ G T Y+APE D + DI++FG++L
Sbjct: 194 QSTNQLDVGNN-----PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTW 220
+IA I LE+LH + +IHRD++P+NVLI+ + + +FG++ + + +
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 221 SLAETVG--YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF---FQHTKEM 272
I PE +Q S K DI+S G+ L + +FP D + FQ K++
Sbjct: 198 GCKPYXAPERINPELNQK-GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HRD+ N ++ D +I +FG+ + I V
Sbjct: 140 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVL 221
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HRD+ N ++ D +I +FG+ + I V
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G VY+A+L SG ++ IKKV+Q + ++ + H +++++ ++G+ +
Sbjct: 34 GVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 115 IVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLH 174
+ L+ V VY R+ S+ ++ L + + L Y+H
Sbjct: 93 YLNLVLDYV----PATVYRVARH---------YSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEA-RISEFGLAKQIPNGRTRTTTWSLAETVGYIAPEC 233
I HRDI+P N+L+D D ++ +FG AKQ+ G S + Y APE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 234 -HQTVALSDKCDIYSFGVLLAVLMMGK--FPSD 263
+ D++S G +LA L++G+ FP D
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
I + + + Y+H + I HRD++P+N+L+D + ++S+FG ++ + + + + +
Sbjct: 156 IIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG- 212
Query: 222 LAETVGYIAPE--CHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMR 279
T ++ PE +++ K DI+S G+ L V+ P + ++S V+
Sbjct: 213 ---TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP------FSLKISLVELFN 263
Query: 280 NVMT 283
N+ T
Sbjct: 264 NIRT 267
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
++G K V+ P +S+ E +++ EI T +RH +V L
Sbjct: 74 ATGNNFAAKFVMTPHESDKETVRK--------------EIQTMSVLRHPTLVNLHDAFED 119
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
+ +++YEF G L + + D E + + R + GL ++H ++ +H
Sbjct: 120 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV---EYMRQVCKGLCHMHENN---YVHL 173
Query: 185 DIQPANVLIDD--DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
D++P N++ E ++ +FGL + ++ T AE + APE + +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE---FAAPEVAEGKPVGYY 230
Query: 243 CDIYSFGVLLAVLMMGKFP 261
D++S GVL +L+ G P
Sbjct: 231 TDMWSVGVLSYILLSGLSP 249
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 38/262 (14%)
Query: 86 IKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILY 145
I++D+E ++ + E++ Q RH N+V + + P ++ + +L ++
Sbjct: 65 IERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR 121
Query: 146 DVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFG 205
D + LD +IA+ I G+ YLH I+H+D++ NV D+ + I++FG
Sbjct: 122 D---AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFG 174
Query: 206 L---AKQIPNGRTRTTTWSLAETVGYIAPEC---------HQTVALSDKCDIYSFGVLLA 253
L + + GR + ++APE + S D+++ G +
Sbjct: 175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWY 234
Query: 254 VLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACF 313
L ++P T+ + W N S+ IG G E + I F
Sbjct: 235 ELHAREWPFK-----TQPAEAIIWQMGTGMKPNLSQ------IGMGKE-----ISDILLF 278
Query: 314 CTFDDPEERPNSKDVRCMLSQI 335
C + EERP + ML ++
Sbjct: 279 CWAFEQEERPTFTKLMDMLEKL 300
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 65 SSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVR 124
++G K V+ P +S+ E +++ EI T +RH +V L
Sbjct: 180 ATGNNFAAKFVMTPHESDKETVRK--------------EIQTMSVLRHPTLVNLHDAFED 225
Query: 125 PDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHR 184
+ +++YEF G L + + D E + + R + GL ++H ++ +H
Sbjct: 226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV---EYMRQVCKGLCHMHENN---YVHL 279
Query: 185 DIQPANVLIDD--DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
D++P N++ E ++ +FGL + ++ T AE + APE + +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE---FAAPEVAEGKPVGYY 336
Query: 243 CDIYSFGVLLAVLMMGKFP 261
D++S GVL +L+ G P
Sbjct: 337 TDMWSVGVLSYILLSGLSP 355
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L S R + IHRD+ N+L+ ++ +I +FGLA+ I
Sbjct: 208 VARGMEFL--SSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTS 284
+ ++APE S K D++S+GVLL + +G P + + F +R M
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP---YPGVQMDEDFCSRLREGMRM 321
Query: 285 ENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERP 323
P + + +I C DP+ERP
Sbjct: 322 RAPEYSTPE-------------IYQIMLDCWHRDPKERP 347
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 57 VYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIV 116
VYKA ++ +++ IKK+ +SEA+ + ++ ++ EI ++ H NI+
Sbjct: 26 VYKAR-DKNTNQIVAIKKIKLGHRSEAK------DGINRTALR---EIKLLQELSHPNII 75
Query: 117 PLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIAS--GLEYLH 174
LL LV++F L+ I+ D S L H A + + GLEYLH
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLH 129
Query: 175 MSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECH 234
I+HRD++P N+L+D++ ++++FGLAK G T Y APE
Sbjct: 130 QHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELL 184
Query: 235 QTVALSD-KCDIYSFGVLLAVLMM 257
+ D+++ G +LA L++
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLL 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
GL++LH SHR ++HRD++P N+L+ + ++++FGLA+ T S+ T+ Y
Sbjct: 132 GLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWY 185
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA 253
APE + + D++S G + A
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
GL++LH SHR ++HRD++P N+L+ + ++++FGLA+ T S+ T+ Y
Sbjct: 132 GLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWY 185
Query: 229 IAPECHQTVALSDKCDIYSFGVLLA 253
APE + + D++S G + A
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGY 228
GL++LH SHR ++HRD++P N+L+ + ++++FGLA+ T S+ T+ Y
Sbjct: 132 GLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWY 185
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMMGK 259
APE + + D++S G + A + K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 84 ELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI 143
+++K+++ P ++ + SE QV H +++ L + LL+ E+ + GSL+
Sbjct: 59 KMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 144 LYD---VSQG-----------------RRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
L + V G R L A I+ G++YL +++H
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVH 173
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
RD+ N+L+ + + +IS+FGL++ + + V ++A E + +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 244 DIYSFGVLL-AVLMMGKFP 261
D++SFGVLL ++ +G P
Sbjct: 234 DVWSFGVLLWEIVTLGGNP 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 84 ELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI 143
+++K+++ P ++ + SE QV H +++ L + LL+ E+ + GSL+
Sbjct: 59 KMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 144 LYD---VSQG-----------------RRELDWLARHRIARGIASGLEYLHMSHRPRIIH 183
L + V G R L A I+ G++YL +++H
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVH 173
Query: 184 RDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
RD+ N+L+ + + +IS+FGL++ + + V ++A E + +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 244 DIYSFGVLL-AVLMMGKFP 261
D++SFGVLL ++ +G P
Sbjct: 234 DVWSFGVLLWEIVTLGGNP 252
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 160 YMEDS-TXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 261
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 262 LKAQLSTI 269
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 84 ELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI 143
+++K+++ P ++ + SE QV H +++ L + LL+ E+ + GSL+
Sbjct: 59 KMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116
Query: 144 LYD---VSQG-----------------RRELDWLARHRIARGIASGLEYL-HMSHRPRII 182
L + V G R L A I+ G++YL MS ++
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS----LV 172
Query: 183 HRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDK 242
HRD+ N+L+ + + +IS+FGL++ + + V ++A E + +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 243 CDIYSFGVLL-AVLMMGKFP 261
D++SFGVLL ++ +G P
Sbjct: 233 SDVWSFGVLLWEIVTLGGNP 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 58 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 174
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 175 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 184 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 47/232 (20%)
Query: 55 GEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRN 114
G V+K+ + +G V+ +KK+ ++ + + E I I +E+ +G H N
Sbjct: 23 GIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFRE------IMILTEL--SG---HEN 70
Query: 115 IVPLLARVVRPDCD---LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
IV LL V+R D D LV+++ ++ L+ V + L+ + + + + ++
Sbjct: 71 IVNLL-NVLRADNDRDVYLVFDY-----METDLHAVIRANI-LEPVHKQYVVYQLIKVIK 123
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLA-------- 223
YLH ++HRD++P+N+L++ + ++++FGL++ N R T L+
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 224 -----------ETVGYIAPEC-HQTVALSDKCDIYSFGVLLAVLMMGK--FP 261
T Y APE + + D++S G +L ++ GK FP
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I LE+LH + II+RDI+ N+L+D + +++FGL+K+ T + T
Sbjct: 168 IVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGT 223
Query: 226 VGYIAPE-CHQTVALSDKC-DIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMT 283
+ Y+AP+ + DK D +S GVL+ L+ G P F ++ S + R ++
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP---FTVDGEKNSQAEISRRILK 280
Query: 284 SENP 287
SE P
Sbjct: 281 SEPP 284
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 431 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 482
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 540 YMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 594
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 595 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 641
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 642 LKAQLSTI 649
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HR++ N ++ D +I +FG+ + I V
Sbjct: 141 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 114 NIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDV------SQGRRELDWLARHRIARGIA 167
++V LL V + L+V E +G L+ L + + GR ++A IA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 168 SGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG 227
G+ YL+ + +HR++ N ++ D +I +FG+ + I V
Sbjct: 142 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 228 YIAPECHQTVALSDKCDIYSFGVLL 252
++APE + + D++SFGV+L
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVL 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 53 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 104
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 105 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
Query: 209 QIPNGRTRTTTWSLAE---TVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDD 264
+ + +T + ++ + ++APE + D++ FGV + +LM G P
Sbjct: 162 YMED----STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP--- 214
Query: 265 FFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPN 324
FQ K + + N P + L L C+ DP RP
Sbjct: 215 -FQGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPR 260
Query: 325 SKDVRCMLSQI 335
+++ LS I
Sbjct: 261 FTELKAQLSTI 271
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 56 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 107
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 108 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
Query: 209 QIPNGRTRTTTWSLAE---TVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDD 264
+ + +T + ++ + ++APE + D++ FGV + +LM G P
Sbjct: 165 YMED----STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP--- 217
Query: 265 FFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPN 324
FQ K + + N P + L L C+ DP RP
Sbjct: 218 -FQGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPR 263
Query: 325 SKDVRCMLSQI 335
+++ LS I
Sbjct: 264 FTELKAQLSTI 274
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 54 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 105
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 106 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
Query: 209 QIPNGRTRTTTWSLAE---TVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDD 264
+ + +T + ++ + ++APE + D++ FGV + +LM G P
Sbjct: 163 YMED----STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP--- 215
Query: 265 FFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPN 324
FQ K + + N P + L L C+ DP RP
Sbjct: 216 -FQGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPR 261
Query: 325 SKDVRCMLSQI 335
+++ LS I
Sbjct: 262 FTELKAQLSTI 272
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 48 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 99
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 100 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 157 YMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 211
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 212 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 258
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 259 LKAQLSTI 266
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 79 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 130
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 131 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
Query: 209 QIPNGRTRTTTWSLAE---TVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDD 264
+ + +T + ++ + ++APE + D++ FGV + +LM G P
Sbjct: 188 YMED----STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP--- 240
Query: 265 FFQHTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPN 324
FQ K + + N P + L L C+ DP RP
Sbjct: 241 -FQGVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPR 286
Query: 325 SKDVRCMLSQI 335
+++ LS I
Sbjct: 287 FTELKAQLSTI 297
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 103 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 160 YMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 261
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 262 LKAQLSTI 269
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 112 HRNIVPLLARVVRPDCD--LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
H N++P+L P L+ + GSL ++L++ + +D + A +A G
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF--VVDQSQAVKFALDMARG 123
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARIS--EFGLAKQIPNGRTRTTTWSLAETVG 227
+ +LH + P I + +V+ID+DM ARIS + + Q P GR W E +
Sbjct: 124 MAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-GRMYAPAWVAPEALQ 181
Query: 228 YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENP 287
+ ++ A D++SF VLL L+ + P D E+ M+ + P
Sbjct: 182 KKPEDTNRRSA-----DMWSFAVLLWELVTREVPFADL--SNMEIG----MKVALEGLRP 230
Query: 288 SRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLSQIQ 336
+ I G + ++KI C +DP +RP + +L ++Q
Sbjct: 231 T-------IPPGISPHVSKLMKI---CMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ + ++ +FGL++
Sbjct: 103 VRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 160 YMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 261
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 262 LKAQLSTI 269
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
I GL+Y+H ++ ++HRD++P+N+LI+ + +I +FGLA+ I + T + L E
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGF-LTEX 207
Query: 226 VG---YIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
V Y APE + + DI+S G +LA ++ + FP +
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQT 236
H+ +HRDI+P N+L+D + R+++FG ++ T ++ ++ T YI+PE Q
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVG-TPDYISPEILQA 250
Query: 237 VA-----LSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVMTSENPSRTI 291
+ +CD +S GV + ++ G+ P F+ + ++ + M + + P++
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETP---FYAESLVETYGKIMNHKERFQFPTQVT 307
Query: 292 D 292
D
Sbjct: 308 D 308
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 99 QIQSEIITAGQVRHRNIVPLLARVVRPDCD--LLVYEFRRNGSLQDILYDVSQGRRELDW 156
++ EI ++RH+N++ L+ + + +V E+ G +Q++L V + R +
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPV-- 108
Query: 157 LARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTR 216
H + GLEYLH I+H+DI+P N+L+ +IS G+A+ +
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 217 TTTWSLAETVGYIAPECHQTVALSD--KCDIYSFGVLLAVLMMGKFP 261
T + + + PE + K DI+S GV L + G +P
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 221
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 176
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 28/172 (16%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCD----LLVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + L+ + +GSL D L R+ L+
Sbjct: 50 ETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEP 104
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
R+A A GL +LH+ +P I HRD + NVL+ +++ I++ GLA
Sbjct: 105 HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHS 164
Query: 212 NGRTRTTTWS--LAETVGYIAPE---------CHQTVALSDKCDIYSFGVLL 252
G + T Y+APE C ++ + DI++FG++L
Sbjct: 165 QGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWT---DIWAFGLVL 213
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI---PNGRTRTTTWSLAET 225
GL+Y+H + ++IHRD++P+N+L++++ E +I +FG+A+ + P T +A T
Sbjct: 170 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-T 225
Query: 226 VGYIAPECHQTV-ALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQWMRNVM 282
Y APE ++ + D++S G + ++ + FP ++ +Q + V+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ------LQLIMMVL 279
Query: 283 TSENPS 288
+ +P+
Sbjct: 280 GTPSPA 285
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI---PNGRTRTTTWSLAET 225
GL+Y+H + ++IHRD++P+N+L++++ E +I +FG+A+ + P T +A T
Sbjct: 171 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-T 226
Query: 226 VGYIAPECHQTV-ALSDKCDIYSFGVLLAVLMMGK--FPSDDFFQHTKEMSFVQWMRNVM 282
Y APE ++ + D++S G + ++ + FP ++ +Q + V+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ------LQLIMMVL 280
Query: 283 TSENPS 288
+ +P+
Sbjct: 281 GTPSPA 286
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N ++ +D +I +FG+ + I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDL----LVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 84 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTV 138
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA +
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-H 197
Query: 212 NGRTRTTTWSLAETVG---YIAPEC-HQTVALS-----DKCDIYSFGVLL 252
+ T T + VG Y+APE ++ + + DIY+ G++
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 247
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ LEKI G V+KA+ + ++ +K+V + D E + ++
Sbjct: 4 YEKLEKIGEGTYGTVFKAK-NRETHEIVALKRV---------RLDDDDEGVPSSALR--- 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
EI +++H+NIV L V+ D L LV+EF QD+ +LD
Sbjct: 51 EICLLKELKHKNIV-RLHDVLHSDKKLTLVFEF----CDQDLKKYFDSCNGDLDPEIVKS 105
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ GL + H + ++HRD++P N+LI+ + E ++++FGLA+ G +
Sbjct: 106 FLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSA 160
Query: 222 LAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGK---FPSDD 264
T+ Y P+ L S D++S G + A L FP +D
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGND 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDL----LVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTV 99
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA +
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-H 158
Query: 212 NGRTRTTTWSLAETVG---YIAPEC-HQTVALS-----DKCDIYSFGVLL 252
+ T T + VG Y+APE ++ + + DIY+ G++
Sbjct: 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 38/210 (18%)
Query: 68 RVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQ-SEIITAGQVRHRNIVPLLARVVRPD 126
+ + ++K+ + +A L+K + + + +I S + + + R V +LA + P+
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 127 CDLLVYEFRRNGSLQDILYDVSQG-----------------RRELDWLARHRIARGIASG 169
F NGSL I+ D +G + LDW + +A
Sbjct: 85 IVQYRESFEENGSLY-IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------ 137
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE----T 225
L H +I+HRDI+ N+ + D ++ +FG+A R +T LA T
Sbjct: 138 ---LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA------RVLNSTVELARACIGT 188
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVL 255
Y++PE + ++K DI++ G +L L
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDL----LVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 71 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTV 125
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA +
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-H 184
Query: 212 NGRTRTTTWSLAETVG---YIAPEC-HQTVALS-----DKCDIYSFGVLL 252
+ T T + VG Y+APE ++ + + DIY+ G++
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 234
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDL----LVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 51 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTV 105
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA +
Sbjct: 106 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-H 164
Query: 212 NGRTRTTTWSLAETVG---YIAPEC-HQTVALS-----DKCDIYSFGVLL 252
+ T T + VG Y+APE ++ + + DIY+ G++
Sbjct: 165 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDL----LVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 48 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTV 102
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA +
Sbjct: 103 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-H 161
Query: 212 NGRTRTTTWSLAETVG---YIAPEC-HQTVALS-----DKCDIYSFGVLL 252
+ T T + VG Y+APE ++ + + DIY+ G++
Sbjct: 162 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 211
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 179
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDL----LVYEFRRNGSLQDILYDVSQGRRELDW 156
++EI +RH NI+ +A + + LV ++ +GSL D L R +
Sbjct: 46 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTV 100
Query: 157 LARHRIARGIASGLEYLHM-----SHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
++A ASGL +LHM +P I HRD++ N+L+ + I++ GLA +
Sbjct: 101 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR-H 159
Query: 212 NGRTRTTTWSLAETVG---YIAPEC-HQTVALS-----DKCDIYSFGVLL 252
+ T T + VG Y+APE ++ + + DIY+ G++
Sbjct: 160 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 179
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 179
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 178
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 185
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 141 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI-PNGRTRTTTWSLAE 224
I GL+Y+H ++ ++HRD++P+N+L++ + +I +FGLA+ P+
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 225 TVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMGK--FPSDDFF 266
T Y APE + + DI+S G +LA ++ + FP +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 431 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 482
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ ++ +FGL++
Sbjct: 483 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 540 YMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 594
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 595 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 641
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 642 LKAQLSTI 649
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKQIPNGRTRT- 217
+A + S +EY+H + IHRD++P N L+ + I +FGLAK+ + RT
Sbjct: 108 LADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 164
Query: 218 ----TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMS 273
+L T Y + H + S + D+ S G +L +G P TK
Sbjct: 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224
Query: 274 FVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLS 333
+ + M++ +++ GY + L FDD +P+ +R +
Sbjct: 225 YERISEKKMSTP-------IEVLCKGYPSEFATYLNFCRSLRFDD---KPDYSYLRQLFR 274
Query: 334 QIQH 337
+ H
Sbjct: 275 NLFH 278
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKQIPNGRTRT- 217
+A + S +EY+H + IHRD++P N L+ + I +FGLAK+ + RT
Sbjct: 110 LADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Query: 218 ----TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMS 273
+L T Y + H + S + D+ S G +L +G P TK
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226
Query: 274 FVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLS 333
+ + M++ +++ GY + L FDD +P+ +R +
Sbjct: 227 YERISEKKMSTP-------IEVLCKGYPSEFATYLNFCRSLRFDD---KPDYSYLRQLFR 276
Query: 334 QIQH 337
+ H
Sbjct: 277 NLFH 280
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 130 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQ 187
+V E+ G L +++ YDV + W AR A + + L H IHRD++
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 200
Query: 188 PANVLIDDDMEARISEFGLA-KQIPNGRTRTTTWSLAETVGYIAPECHQTVA----LSDK 242
P N+L+D ++++FG K G R T T YI+PE ++ +
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 243 CDIYSFGVLLAVLMMGKFP 261
CD +S GV L +++G P
Sbjct: 259 CDWWSVGVFLYEMLVGDTP 277
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 31/248 (12%)
Query: 90 SEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQ 149
S+ + K +Q E +T Q H +IV L+ V+ + ++ E G L+ L Q
Sbjct: 51 SDSVREKFLQ---EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFL----Q 102
Query: 150 GRR-ELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
R+ LD + A +++ L YL R +HRDI NVL+ ++ +FGL++
Sbjct: 103 VRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 159
Query: 209 QIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGV-LLAVLMMGKFPSDDFFQ 267
+ + T + ++APE + D++ FGV + +LM G P FQ
Sbjct: 160 YMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 268 HTKEMSFVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKD 327
K + + N P + L L C+ DP RP +
Sbjct: 215 GVKNNDVIGRIENGERLPMPPNCPPT-----------LYSLMTKCWAY--DPSRRPRFTE 261
Query: 328 VRCMLSQI 335
++ LS I
Sbjct: 262 LKAQLSTI 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 130 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQ 187
+V E+ G L +++ YDV + W AR A + + L H IHRD++
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 200
Query: 188 PANVLIDDDMEARISEFGLA-KQIPNGRTRTTTWSLAETVGYIAPECHQTVA----LSDK 242
P N+L+D ++++FG K G R T T YI+PE ++ +
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 243 CDIYSFGVLLAVLMMGKFP 261
CD +S GV L +++G P
Sbjct: 259 CDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 130 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQ 187
+V E+ G L +++ YDV + W AR A + + L H IHRD++
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 195
Query: 188 PANVLIDDDMEARISEFGLA-KQIPNGRTRTTTWSLAETVGYIAPECHQTVA----LSDK 242
P N+L+D ++++FG K G R T T YI+PE ++ +
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 243 CDIYSFGVLLAVLMMGKFP 261
CD +S GV L +++G P
Sbjct: 254 CDWWSVGVFLYEMLVGDTP 272
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ LEKI G V+KA+ + ++ +K+V + D E + ++
Sbjct: 4 YEKLEKIGEGTYGTVFKAK-NRETHEIVALKRV---------RLDDDDEGVPSSALR--- 50
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLARHR 161
EI +++H+NIV L V+ D L LV+EF QD+ +LD
Sbjct: 51 EICLLKELKHKNIV-RLHDVLHSDKKLTLVFEF----CDQDLKKYFDSCNGDLDPEIVKS 105
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ GL + H + ++HRD++P N+LI+ + E +++ FGLA+ G +
Sbjct: 106 FLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSA 160
Query: 222 LAETVGYIAPECHQTVAL-SDKCDIYSFGVLLAVLMMGK---FPSDD 264
T+ Y P+ L S D++S G + A L FP +D
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 318
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 367
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
++YLH + IIHRD++P NVL+ ++D +I++FG +K + G T + +L T
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET-SLMRTLCGT 304
Query: 226 VGYIAPECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
Y+APE +V + D +S GV+L + + G P F +H ++S
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSL 353
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 41 DCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQI 100
D + LE++ S G V++ + ++GRV K + P PL +
Sbjct: 51 DYYDILEELGSGAFGVVHRC-VEKATGRVFVAKFINTPY------------PL--DKYTV 95
Query: 101 QSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARH 160
++EI Q+ H ++ L +L+ EF G L D + E + +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM 155
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEA--RISEFGLAKQI-PNGRTRT 217
R A GL+++H I+H DI+P N++ + + +I +FGLA ++ P+ +
Sbjct: 156 RQA---CEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
TT T + APE + D+++ GVL VL+ G P
Sbjct: 210 TT----ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E++ + IVPL V + E GSL ++ +++ L R
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRA 166
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKQI-PNGRTRT--T 218
+ LE L H RI+H D++ NVL+ D A + +FG A + P+G ++ T
Sbjct: 167 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ T ++APE K DI+S ++ ++ G P +F+
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKQIPNGRTRT- 217
+A + S +EY+H + IHRD++P N L+ + I +FGLAK+ + RT
Sbjct: 110 LADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Query: 218 ----TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMS 273
+L T Y + H + S + D+ S G +L +G P TK
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226
Query: 274 FVQWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDVRCMLS 333
+ + M++ +++ GY + L FDD +P+ +R +
Sbjct: 227 YERISEKKMSTP-------IEVLCKGYPSEFSTYLNFCRSLRFDD---KPDYSYLRQLFR 276
Query: 334 QIQH 337
+ H
Sbjct: 277 NLFH 280
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E++ + IVPL V + E GSL ++ +++ L R
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRA 168
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKQI-PNGRTRT--T 218
+ LE L H RI+H D++ NVL+ D A + +FG A + P+G ++ T
Sbjct: 169 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ T ++APE K DI+S ++ ++ G P +F+
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 2 FSFVLKLISAAVRGGSRDRGPTIFSPLIEKEDLAFLKKEDCFASLEKIRSCWNGEVYKAE 61
F + + A R GS + P + + L K+D E F+ L +I G VY A
Sbjct: 22 FQGAMDPMPAGGRAGSL-KDPDV-AELFFKDD-----PEKLFSDLREIGHGSFGAVYFAR 74
Query: 62 LPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLAR 121
+S V+ IKK+ K E K I E+ ++RH N +
Sbjct: 75 DVRNS-EVVAIKKMSYSGKQSNE-----------KWQDIIKEVRFLQKLRHPNTIQYRGC 122
Query: 122 VVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRI 181
+R LV E+ GS D+L + +E++ A + G GL YLH SH +
Sbjct: 123 YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH-SHN--M 175
Query: 182 IHRDIQPANVLIDDDMEARISEFGLAKQI--PNGRTRTTTWSLAETVGYIAPECHQTVAL 239
IHRD++ N+L+ + ++ +FG A + N T W E + +A + Q
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVI--LAMDEGQ---Y 230
Query: 240 SDKCDIYSFGV 250
K D++S G+
Sbjct: 231 DGKVDVWSLGI 241
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 98 IQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWL 157
I+ +E + ++V LL V + L++ E G L+ L + L
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 158 ARH------RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIP 211
A ++A IA G+ YL+ + + +HRD+ N + +D +I +FG+ + I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 212 NGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
V +++PE + + D++SFGV+L
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E++ + IVPL V + E GSL ++ +++ L R
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRA 152
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKQI-PNGRTRT--T 218
+ LE L H RI+H D++ NVL+ D A + +FG A + P+G ++ T
Sbjct: 153 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ T ++APE K DI+S ++ ++ G P +F+
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 129 LLVYEFRRNGSLQDILYDVSQGRRELDWLARH--RIARGIASGLEYLHMSHRPRIIHRDI 186
+++ F ++G L L G + + R IA G+EYL S R IHRD+
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL--SSR-NFIHRDL 163
Query: 187 QPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIY 246
N ++ +DM +++FGL+++I +G + V ++A E + D++
Sbjct: 164 AARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVW 223
Query: 247 SFGVLLAVLMM-GKFP 261
+FGV + +M G+ P
Sbjct: 224 AFGVTMWEIMTRGQTP 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E+ ++H NIV L + LV+E+ + L+ L D + + H +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCG------NIINMHNV 102
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGL--AKQIPNGRTRTTTW 220
+ L L HR +++HRD++P N+LI++ E ++++FGL AK IP T+T
Sbjct: 103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDN 159
Query: 221 SLAETVGYIAPE-CHQTVALSDKCDIYSFGVLLAVLMMGK--FPS 262
+ T+ Y P+ + S + D++ G + + G+ FP
Sbjct: 160 EVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 EDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQ 99
E F+ L +I G VY A +S V+ IKK+ K E K
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNS-EVVAIKKMSYSGKQSNE-----------KWQD 61
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
I E+ ++RH N + +R LV E+ GS D+L + +E++ A
Sbjct: 62 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA- 119
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI--PNGRTRT 217
+ G GL YLH SH +IHRD++ N+L+ + ++ +FG A + N T
Sbjct: 120 --VTHGALQGLAYLH-SHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQW 277
W E + +A + Q K D++S G+ L K P F M+ +
Sbjct: 175 PYWMAPEVI--LAMDEGQ---YDGKVDVWSLGITCIELAERKPP---LFN----MNAMSA 222
Query: 278 MRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSK 326
+ ++ +E+P+ + +G+ + +C P++RP S+
Sbjct: 223 LYHIAQNESPA-------LQSGHWSEYFRNFVDSCLQKI--PQDRPTSE 262
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ L KI GEV+KA +G+ + +KKV+ + E I E K++Q+
Sbjct: 19 YEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREI---KILQL-- 72
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCD---------LLVYEFRRN---GSLQDILYDVSQG 150
++H N+V L+ + R LV++F + G L ++L +
Sbjct: 73 -------LKHENVVNLI-EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 124
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
+ R+ + + +GL Y+H R +I+HRD++ ANVLI D ++++FGLA+
Sbjct: 125 EIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 109 QVRHRNIVPLLA--RVVRPDCDLLVYEFRRNGSLQDILYDVSQ--GRRELDWLARHRIAR 164
++ H+NIV L A +L+ EF GSL +L + S G E ++L + R
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---VLR 119
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVL--IDDDMEA--RISEFGLAKQIPNGRTRTTTW 220
+ G+ +L + I+HR+I+P N++ I +D ++ ++++FG A+++ + + +
Sbjct: 120 DVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY 176
Query: 221 SLAETVGYIAPECHQTVAL--------SDKCDIYSFGVLLAVLMMGKFPSDDF 265
E Y+ P+ ++ L D++S GV G P F
Sbjct: 177 GTEE---YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRT 217
RI + + S + Y H+ + HRD++P N L D ++ +FGLA + G+
Sbjct: 110 RIMKDVLSAVAY---CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T T Y++P+ + + +CD +S GV++ VL+ G P
Sbjct: 167 TK---VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLI---DDDMEARISEFGLAKQIPNGRTRT 217
RI + + S + Y H+ + HRD++P N L D ++ +FGLA + G+
Sbjct: 127 RIMKDVLSAVAY---CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
T T Y++P+ + + +CD +S GV++ VL+ G P
Sbjct: 184 TK---VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ L KI GEV+KA +G+ + +KKV+ + E I E K++Q+
Sbjct: 20 YEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREI---KILQL-- 73
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCD---------LLVYEFRRN---GSLQDILYDVSQG 150
++H N+V L+ + R LV++F + G L ++L +
Sbjct: 74 -------LKHENVVNLI-EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
+ R+ + + +GL Y+H R +I+HRD++ ANVLI D ++++FGLA+
Sbjct: 126 EIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ L KI GEV+KA +G+ + +KKV+ + E I E K++Q+
Sbjct: 20 YEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREI---KILQL-- 73
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCD---------LLVYEFRRN---GSLQDILYDVSQG 150
++H N+V L+ + R LV++F + G L ++L +
Sbjct: 74 -------LKHENVVNLI-EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
+ R+ + + +GL Y+H R +I+HRD++ ANVLI D ++++FGLA+
Sbjct: 126 EIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ L KI GEV+KA +G+ + +KKV+ + E I E K++Q+
Sbjct: 20 YEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREI---KILQL-- 73
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCD---------LLVYEFRRN---GSLQDILYDVSQG 150
++H N+V L+ + R LV++F + G L ++L +
Sbjct: 74 -------LKHENVVNLI-EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 151 RRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK 208
+ R+ + + +GL Y+H R +I+HRD++ ANVLI D ++++FGLA+
Sbjct: 126 EIK-------RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E++ + IVPL V + E GSL ++ +E L R
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-------KEQGCLPEDRA 187
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKQI-PNGRTRT--T 218
+ LE L H RI+H D++ NVL+ D A + +FG A + P+G ++ T
Sbjct: 188 LYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ T ++APE + K D++S ++ ++ G P FF+
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ +L + IHRD+ N+L+ +I +FGLA+ I N +
Sbjct: 177 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFP------SDDFFQHTKE 271
V ++APE + + D++S+G+ L L +G P F++ KE
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 286
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ R GL++LH + I+HRD++P N+L+ ++++FGLA+ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFP 170
Query: 222 LAETVGYIAPECHQTVALSDKCDIYSFGVLLA 253
+ T+ Y APE + D++S G + A
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ +L + IHRD+ N+L+ +I +FGLA+ I N +
Sbjct: 170 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFP------SDDFFQHTKE 271
V ++APE + + D++S+G+ L L +G P F++ KE
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 279
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
+Q E+ + H NIVP A + + +V F GS +D++ + ++ LA
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI--CTHFMDGMNELAI 130
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ---IPNGRTR 216
I +G+ L+Y+ H +HR ++ +++LI D + +S GL I +G+ +
Sbjct: 131 AYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQ 185
Query: 217 TTTWSL----AETVGYIAPECHQT--VALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ + +++PE Q K DIYS G+ L G P D
Sbjct: 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 130 LVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPA 189
LV E+ G L +L G R +AR +A + + + HR +HRDI+P
Sbjct: 138 LVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMA----IDSVHRLGYVHRDIKPD 191
Query: 190 NVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAE--TVGYIAPECHQTVALSD------ 241
N+L+D R+++FG ++ R T SL T Y++PE Q V
Sbjct: 192 NILLDRCGHIRLADFGSCLKL---RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG 248
Query: 242 -KCDIYSFGVLLAVLMMGKFP 261
+CD ++ GV + G+ P
Sbjct: 249 PECDWWALGVFAYEMFYGQTP 269
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ +L + IHRD+ N+L+ +I +FGLA+ I N +
Sbjct: 172 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFP------SDDFFQHTKE 271
V ++APE + + D++S+G+ L L +G P F++ KE
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 281
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 109 QVRHRNIVPLLA--RVVRPDCDLLVYEFRRNGSLQDILYDVSQ--GRRELDWLARHRIAR 164
++ H+NIV L A +L+ EF GSL +L + S G E ++L + R
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---VLR 119
Query: 165 GIASGLEYLHMSHRPRIIHRDIQPANVL--IDDDMEA--RISEFGLAKQIPNGRTRTTTW 220
+ G+ +L + I+HR+I+P N++ I +D ++ ++++FG A+++ + +
Sbjct: 120 DVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY 176
Query: 221 SLAETVGYIAPECHQTVAL--------SDKCDIYSFGVLLAVLMMGKFPSDDF 265
E Y+ P+ ++ L D++S GV G P F
Sbjct: 177 GTEE---YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLAR 159
+Q E+ + H NIVP A + + +V F GS +D++ + ++ LA
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI--CTHFMDGMNELAI 114
Query: 160 HRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQ---IPNGRTR 216
I +G+ L+Y+ H +HR ++ +++LI D + +S GL I +G+ +
Sbjct: 115 AYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQ 169
Query: 217 TTTWSL----AETVGYIAPECHQT--VALSDKCDIYSFGVLLAVLMMGKFPSDD 264
+ + +++PE Q K DIYS G+ L G P D
Sbjct: 170 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 223
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+E+L + IHRD+ N+L+ + +I +FGLA+ I
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
+ ++APE + + D++SFGVLL + +G P
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ +L + IHRD+ N+L+ +I +FGLA+ I N +
Sbjct: 177 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFP------SDDFFQHTKE 271
V ++APE + + D++S+G+ L L +G P F++ KE
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 286
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
+A G+ +L + IHRD+ N+L+ +I +FGLA+ I N +
Sbjct: 154 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFP------SDDFFQHTKE 271
V ++APE + + D++S+G+ L L +G P F++ KE
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE 263
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS---- 221
IA +E+LH ++HRD++P+N+ D ++ +FGL + T +
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 222 LAETVG------YIAPECHQTVALSDKCDIYSFGVLLAVLM 256
A G Y++PE + S K DI+S G++L L+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ R GL++LH + I+HRD++P N+L+ ++++FGLA R + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMA 167
Query: 222 LAE---TVGYIAPECHQTVALSDKCDIYSFGVLLA 253
LA T+ Y APE + D++S G + A
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 80 KSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLL----ARVVRPDCDLLVYEFR 135
KSE + K+++E L ++H NIV + V C +LV E
Sbjct: 66 KSERQRFKEEAEXLKG--------------LQHPNIVRFYDSWESTVKGKKCIVLVTELX 111
Query: 136 RNGSLQDIL--YDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLI 193
+G+L+ L + V + + W R I GL++LH + P IIHRD++ N+ I
Sbjct: 112 TSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQFLH-TRTPPIIHRDLKCDNIFI 164
Query: 194 DDDM-EARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLL 252
+I + GLA + + ++ T + APE ++ + D+Y+FG
Sbjct: 165 TGPTGSVKIGDLGLA----TLKRASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCX 219
Query: 253 AVLMMGKFP 261
++P
Sbjct: 220 LEXATSEYP 228
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
H NI+ LL L E+ +G+L D L + R L+ IA AS L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 130
Query: 172 YLHMSH-------------RPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+ H + + IHRD+ N+L+ ++ A+I++FGL++ G+
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV 186
Query: 219 TWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
++ V ++A E + D++S+GVLL ++ +G P
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
H NI+ LL L E+ +G+L D L + R L+ IA AS L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 140
Query: 172 YLHMSH-------------RPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+ H + + IHRD+ N+L+ ++ A+I++FGL++ G+
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV 196
Query: 219 TWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
++ V ++A E + D++S+GVLL ++ +G P
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 26/244 (10%)
Query: 26 SPLIEKEDLAFLK--KEDCFASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEA 83
SP E + A L+ KE F ++ + S G VYK L G + I I+ L+ EA
Sbjct: 2 SPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKG-LWIPEGEKVKIPVAIKELR-EA 59
Query: 84 ELIKQDSEPLHHKMIQIQSEIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDI 143
K + E I E V + ++ LL + L++ + G L D
Sbjct: 60 TSPKANKE--------ILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDY 110
Query: 144 L---YDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEAR 200
+ D + L+W + IA G+ YL R++HRD+ NVL+ +
Sbjct: 111 VREHKDNIGSQYLLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 161
Query: 201 ISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGK 259
I++FGLAK + + ++A E + + D++S+GV + LM G
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 260 FPSD 263
P D
Sbjct: 222 KPYD 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 11/169 (6%)
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
E++ + IVPL V + E GSL ++ +E L R
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-------KEQGCLPEDRA 168
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDD-MEARISEFGLAKQI-PNGRTRT--T 218
+ LE L H RI+H D++ NVL+ D A + +FG A + P+G + T
Sbjct: 169 LYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQ 267
+ T ++APE + K D++S ++ ++ G P FF+
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 43 FASLEKIRSCWNGEVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQS 102
+ + KI G V+K +G+++ IKK ++ + +P+ K+
Sbjct: 5 YEKIGKIGEGSYGVVFKCR-NRDTGQIVAIKKFLE----------SEDDPVIKKIAL--R 51
Query: 103 EIITAGQVRHRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRI 162
EI Q++H N+V LL R LV+E+ +L+++ + +R + H +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY----CDHTVLHELDRYQRGV---PEHLV 104
Query: 163 ARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSL 222
L+ ++ H+ IHRD++P N+LI ++ +FG A+ + G + +
Sbjct: 105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV 163
Query: 223 AETVGYIAPECH-QTVALSDKCDIYSFGVLLAVLMMG 258
A T Y +PE D+++ G + A L+ G
Sbjct: 164 A-TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 32/173 (18%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS---- 221
IA +E+LH ++HRD++P+N+ D ++ +FGL + T +
Sbjct: 173 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 222 LAETVG------YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFV 275
A G Y++PE S K DI+S G++L L+ + + +M V
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---------YSFSTQMERV 280
Query: 276 QWMRNVMTSENPSRTIDSKLIGNGYEEQMLLVLKIACFCTFDDPEERPNSKDV 328
+ + +V + P L Y ++ ++V + P ERP + D+
Sbjct: 281 RIITDVRNLKFPL------LFTQKYPQEHMMVQDMLS----PSPTERPEATDI 323
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWS 221
+ R GL++LH + I+HRD++P N+L+ ++++FGLA+ T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT---P 178
Query: 222 LAETVGYIAPECHQTVALSDKCDIYSFGVLLA 253
+ T+ Y APE + D++S G + A
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 130 LVYEFRRNGSLQDIL--YDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDIQ 187
+V E+ G L +++ YDV + W A+ A + + L H +IHRD++
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPE-----KW-AKFYTAEVVLA----LDAIHSMGLIHRDVK 201
Query: 188 PANVLIDDDMEARISEFGLA-KQIPNGRTRTTTWSLAETVGYIAPECHQTVA----LSDK 242
P N+L+D ++++FG K G T T YI+PE ++ +
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT--AVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 243 CDIYSFGVLLAVLMMGKFP 261
CD +S GV L +++G P
Sbjct: 260 CDWWSVGVFLFEMLVGDTP 278
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 162 IARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAK----QIPNGRTRT 217
+ R GL++LH + I+HRD++P N+L+ ++++FGLA+ Q+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 218 TTWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLA 253
T W Y APE + D++S G + A
Sbjct: 174 TLW-------YRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+ ++ G + H +IV LL + P L LV ++ GSL D V Q R L
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLG--LCPGSSLQLVTQYLPLGSLLD---HVRQHRGALGPQL 116
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
IA G+ YL ++HR++ NVL+ + ++++FG+A +P +
Sbjct: 117 LLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
+ ++A E + + D++S+GV + LM
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 100 IQSEIITAGQVRHRNIVPLLARVVRPDCDL-LVYEFRRNGSLQDILYDVSQGRRELDWLA 158
+ ++ G + H +IV LL + P L LV ++ GSL D V Q R L
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLG--LCPGSSLQLVTQYLPLGSLLD---HVRQHRGALGPQL 134
Query: 159 RHRIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
IA G+ YL ++HR++ NVL+ + ++++FG+A +P +
Sbjct: 135 LLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 219 TWSLAETVGYIAPECHQTVALSDKCDIYSFGVLLAVLM 256
+ ++A E + + D++S+GV + LM
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 120 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 151 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 132 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLAK +
Sbjct: 123 IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 161 RIARGIASGLEYLHMSHRPRIIHRDIQPANVLIDDDM---EARISEFGLAKQIPNGRTRT 217
R+ + I G+ YLH ++ I+H D++P N+L+ + +I +FG++++I +
Sbjct: 135 RLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA---- 187
Query: 218 TTWSLAETVG---YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
L E +G Y+APE ++ D+++ G++ +L+ P
Sbjct: 188 --CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FGLA+ + T
Sbjct: 128 IAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 112 HRNIVPLLARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
H NI+ LL L E+ +G+L D L + R L+ IA AS L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 137
Query: 172 YLHMSH-------------RPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTT 218
+ H + + IHR++ N+L+ ++ A+I++FGL++ G+
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYV 193
Query: 219 TWSLAET-VGYIAPECHQTVALSDKCDIYSFGVLL-AVLMMGKFP 261
++ V ++A E + D++S+GVLL ++ +G P
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
H IIHRD++PAN L++ D ++ +FGLA+ I + + L E
Sbjct: 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 177 HRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
H IIHRD++PAN L++ D +I +FGLA+ I
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH+ H ++HRD+ P N+L+ D+ + I +F LA++ +T Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---HYVTHRWYRAPE 203
Query: 233 -CHQTVALSDKCDIYSFGVLLA 253
Q + D++S G ++A
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMA 225
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 173 LHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPE 232
LH+ H ++HRD+ P N+L+ D+ + I +F LA++ +T Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---HYVTHRWYRAPE 203
Query: 233 -CHQTVALSDKCDIYSFGVLLA 253
Q + D++S G ++A
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMA 225
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 169 GLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQI 210
G++Y+H + I+HRD++PAN L++ D ++ +FGLA+ +
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 170 LEYLHMSHRPRIIHRDIQPANVLID--DDMEARISEFGLA-KQIPNGRTRTTTWSLAE-- 224
LEY+H + +H DI+ AN+L+ + + ++++GL+ + PNG + + +
Sbjct: 164 LEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGH 220
Query: 225 --TVGYIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQWMRNVM 282
T+ + + + H+ VALS + D+ G + + GK P + Q+ K+ VQ + +
Sbjct: 221 NGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE---QNLKDPVAVQTAKTNL 277
Query: 283 TSENPSRTI 291
E P +
Sbjct: 278 LDELPQSVL 286
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 56 EVYKAELPGSSGRVITIKKVIQPLKSEAELIKQDSEPLHHKMIQIQSEIITAGQVRHRNI 115
+VY+AE T+++ I LK +E + S+P+ + Q E TAG+++ ++
Sbjct: 49 DVYEAE--------DTVRERIVALKLXSETLS--SDPVFRT--RXQREARTAGRLQEPHV 96
Query: 116 VPL--LARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHR---IARGIASGL 170
VP+ + D L V NG D++ R LA R I R I S L
Sbjct: 97 VPIHDFGEI---DGQLYVDXRLING------VDLAAXLRRQGPLAPPRAVAIVRQIGSAL 147
Query: 171 EYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAETVG--- 227
+ H + HRD++P N+L+ D A + +FG+A + T L TVG
Sbjct: 148 DAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIA----SATTDEKLTQLGNTVGTLY 200
Query: 228 YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFP 261
Y APE + + DIY+ +L + G P
Sbjct: 201 YXAPERFSESHATYRADIYALTCVLYECLTGSPP 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FG AK +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FG AK +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FG AK +
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FG AK +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FG AK +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 166 IASGLEYLHMSHRPRIIHRDIQPANVLIDDDMEARISEFGLAKQIPNGRTRTTTWSLAET 225
IA G+ YL R++HRD+ NVL+ +I++FG AK +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 226 VGYIAPECHQTVALSDKCDIYSFGVLLAVLM-MGKFPSD 263
+ ++A E + + D++S+GV + LM G P D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Query: 112 HRNIVPLLARVVRPDCD--LLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASG 169
H N++P+L P L+ + GSL ++L++ + +D + A A G
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF--VVDQSQAVKFALDXARG 123
Query: 170 LEYLHMSHRPRIIHRDIQPANVLIDDDMEARIS--EFGLAKQIPNGRTRTTTWSLAETVG 227
+LH + P I + +V ID+D ARIS + + Q P GR W E +
Sbjct: 124 XAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP-GRXYAPAWVAPEALQ 181
Query: 228 YIAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDF 265
+ ++ A D +SF VLL L+ + P D
Sbjct: 182 KKPEDTNRRSA-----DXWSFAVLLWELVTREVPFADL 214
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 127 CDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLEYLHMSHRPRIIHRDI 186
C L+V E G L + D +G + I + I ++YLH + I HRD+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 187 QPANVLIDD---DMEARISEFGLAKQIPNGRTRTTTWSLAETVGYIAPECHQTVALSDKC 243
+P N+L + ++++FG AK ET G C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---------------ETTGE---------KYDKSC 179
Query: 244 DIYSFGVLLAVLMMGKFP 261
D++S GV++ +L+ G P
Sbjct: 180 DMWSLGVIMYILLCGYPP 197
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 177 HRPRIIHRDIQPANVLIDDDMEAR---ISEFGLAKQIPNGRTRT-----TTWSLAETVGY 228
H +HRDI+P N L+ A I +FGLAK+ + T +L T Y
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179
Query: 229 IAPECHQTVALSDKCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSF 274
+ H + S + D+ S G +L + G P TK+ +
Sbjct: 180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY 225
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 114 NIVPLL--ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 136
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G+ + +
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 193
Query: 231 PECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
PE V L D D++S G + A ++ K P F+ H V+
Sbjct: 194 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK 238
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 114 NIVPLL--ARVVRPDCDLLVYEFRRNGSLQDILYDVSQGRRELDWLARHRIARGIASGLE 171
NIV LL R L++E+ N + +LY L + I I L+
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPT---------LTDYDIRYYIYELLK 138
Query: 172 YLHMSHRPRIIHRDIQPANVLIDDDM-EARISEFGLAKQIPNGRTRTTTWSLAETVGYIA 230
L H I+HRD++P NV+ID ++ + R+ ++GLA+ G+ + +
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFKG 195
Query: 231 PECHQTVALSD---KCDIYSFGVLLAVLMMGKFPSDDFFQHTKEMSFVQ 276
PE V L D D++S G + A ++ K P F+ H V+
Sbjct: 196 PEL--LVDLQDYDYSLDMWSLGCMFAGMIFRKEPF--FYGHDNHDQLVK 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,900,183
Number of Sequences: 62578
Number of extensions: 397492
Number of successful extensions: 2804
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 209
Number of HSP's that attempted gapping in prelim test: 1024
Number of HSP's gapped (non-prelim): 1138
length of query: 337
length of database: 14,973,337
effective HSP length: 99
effective length of query: 238
effective length of database: 8,778,115
effective search space: 2089191370
effective search space used: 2089191370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)