Query 036972
Match_columns 275
No_of_seqs 176 out of 1221
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:57:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.9E-52 1E-56 391.5 25.5 248 1-252 173-437 (439)
2 2xr7_A Malonyltransferase; xen 100.0 2.9E-46 9.9E-51 351.9 16.3 245 1-255 180-450 (453)
3 2rkv_A Trichothecene 3-O-acety 100.0 1.2E-44 4.1E-49 340.5 17.8 248 1-254 171-444 (451)
4 2e1v_A Acyl transferase; BAHD 100.0 2.3E-45 7.9E-50 345.9 9.8 242 1-255 185-450 (454)
5 2bgh_A Vinorine synthase; VS, 100.0 3.9E-44 1.3E-48 334.6 16.2 228 1-250 175-410 (421)
6 1q9j_A PAPA5, polyketide synth 92.9 0.88 3E-05 40.6 11.2 99 50-158 211-313 (422)
7 3fot_A 15-O-acetyltransferase; 92.8 0.14 4.8E-06 48.4 5.8 83 50-133 277-363 (519)
8 2xhg_A Tyrocidine synthetase A 80.3 18 0.00062 32.3 11.8 103 50-159 233-336 (466)
9 1l5a_A Amide synthase, VIBH; n 76.2 10 0.00035 33.7 8.6 97 50-158 208-304 (436)
10 2jgp_A Tyrocidine synthetase 3 71.4 14 0.00049 33.7 8.6 98 50-158 303-400 (520)
11 4hvm_A Tlmii; PSI-biology, mid 68.9 12 0.00042 34.0 7.4 103 50-158 215-327 (493)
12 2vsq_A Surfactin synthetase su 58.2 34 0.0012 35.6 9.1 100 50-158 228-327 (1304)
13 2xl1_A Arginine attenuator pep 45.0 14 0.00048 18.9 1.9 17 76-92 8-24 (26)
14 1x93_A Hypothetical protein HP 42.1 21 0.00071 22.0 2.6 37 52-94 3-39 (55)
15 2k1o_A Putative; repressor, tr 21.0 67 0.0023 20.4 2.4 42 49-96 14-55 (66)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=2.9e-52 Score=391.49 Aligned_cols=248 Identities=29% Similarity=0.467 Sum_probs=213.8
Q ss_pred CcccccCCCCCCCCCCCCCcccCCCCCCCCCCCCccccccCCC--C-----CCC-CCceEEEEEeCHhhHHHHHhhCCCC
Q 036972 1 MEDMARGERSPTVFPIWQRQILNARNPPQVTCIHHEYDEINTN--E-----VPS-DNMAHKSFFFSLKGIKALRNQLPFH 72 (275)
Q Consensus 1 wa~~~Rg~~~~~~~P~~dR~~~~~r~pp~~~~~~~~~~~~~~~--~-----~~~-~~~~~~~f~fs~~~i~~Lk~~a~~~ 72 (275)
||++|||... +.+|+|||+++.+|+||.+.++|.+|.+.+.. . ..+ .++++++|+|++++|++||+++.++
T Consensus 173 wa~~~rg~~~-~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~ 251 (439)
T 4g22_A 173 WSDMARGLDV-TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSKED 251 (439)
T ss_dssp HHHHHTTCCC-SSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHHGGGGG
T ss_pred HHHHhCCCCC-CCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHHHhhcc
Confidence 8999999753 67899999999999999988899888654311 1 111 5689999999999999999999764
Q ss_pred --CCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhhcCcHHHHHH
Q 036972 73 --LKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLCKNPIGYAVE 150 (275)
Q Consensus 73 --~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~~~~l~~~A~ 150 (275)
..++|+||+|+||+|+|++|||++++++.+++.++||+|+|+ +||+|++||||++..+.+.++++||.+.+|+++|.
T Consensus 252 ~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl-~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~ 330 (439)
T 4g22_A 252 GNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARL-RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAAS 330 (439)
T ss_dssp GCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTS-SSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCC-CCCCCCCcccceeehhhcceEHHHHhhCcHHHHHH
Confidence 257999999999999999999999888999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHhcc-cccc-----CCCCcEEEecCCCCCCCcccccCCccceeeeccc-cceEEEEEe
Q 036972 151 LVKKAKAQMNEEYIRSVADLMVIKGR-RIKS-----STRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGA-VAVFSFCVK 223 (275)
Q Consensus 151 ~IR~ai~~~~~e~v~~~~~~~~~~~~-~~~~-----~~~~~~~vssw~~~~~y~~DFG~GkP~~~~~~~~-~~~~~~ilp 223 (275)
+||++|.+++++|+++.++|++...+ ..+. ....++.+|||+++++|++|||||||+++++... .+|.++++|
T Consensus 331 ~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p 410 (439)
T 4g22_A 331 KIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILP 410 (439)
T ss_dssp HHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEE
T ss_pred HHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEee
Confidence 99999999999999999999874211 1110 0246899999999999999999999999998763 678888899
Q ss_pred cCCCCCCCcEEEEEecCHHHHHHHHHHHH
Q 036972 224 YQSKNGEPGILVPICLPQSAMERFQEELK 252 (275)
Q Consensus 224 ~~~~~G~~g~ev~v~L~~~~m~~l~~d~~ 252 (275)
+++++| |++|.|+|++++|++|++.+.
T Consensus 411 ~~~~~g--gi~v~v~L~~~~m~~f~~~~~ 437 (439)
T 4g22_A 411 SPTNDG--SMSVAISLQGEHMKLFQSFLY 437 (439)
T ss_dssp CTTCSS--CEEEEEEEEHHHHHHHHHHHT
T ss_pred cCCCCC--cEEEEEECCHHHHHHHHHHhc
Confidence 876666 999999999999999998764
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=2.9e-46 Score=351.90 Aligned_cols=245 Identities=18% Similarity=0.322 Sum_probs=196.2
Q ss_pred Cccccc-CC-C---CCCCCCCCCCcccCCCCCCCCCCCCcccc-ccCCC-C----CCCCCceEEEEEeCHhhHHHHHhhC
Q 036972 1 MEDMAR-GE-R---SPTVFPIWQRQILNARNPPQVTCIHHEYD-EINTN-E----VPSDNMAHKSFFFSLKGIKALRNQL 69 (275)
Q Consensus 1 wa~~~R-g~-~---~~~~~P~~dR~~~~~r~pp~~~~~~~~~~-~~~~~-~----~~~~~~~~~~f~fs~~~i~~Lk~~a 69 (275)
||++|| |. . .++.+|+|||+++. +|+.....+.++. ..+.. . ....++.+++|+|++++|++||+++
T Consensus 180 wa~~~r~G~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a 257 (453)
T 2xr7_A 180 WALLNKFGGDEQFLANEFIPFYDRSVIK--DPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGTFIITRHDIGKLKNLV 257 (453)
T ss_dssp HHHHHHTTTCGGGSCGGGSCBCCCSSSC--CSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCCCEEEEECHHHHHHHHHHH
T ss_pred HHHHhhcCCCcccCCCCCCCcccccccc--CCCCcchHHHHhccccCCccccccccCCCCceEEEEEECHHHHHHHHHHH
Confidence 899999 86 2 13457999999887 4443221111111 10100 0 1234677999999999999999988
Q ss_pred CCCC---CCCchHHHHHHHHHHHHHHhcCC-----CCCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhh
Q 036972 70 PFHL---KDCSTFELLLAFLWKCRTIALKL-----QPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLC 141 (275)
Q Consensus 70 ~~~~---~~~St~d~l~A~iW~~~~rAr~~-----~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~ 141 (275)
.++. .++|+||+|+||+|+|++|||.. ++++++++.++||+|+|+ +||+|++||||++..+.+.++++||.
T Consensus 258 ~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl-~pplP~~Y~GN~~~~~~~~~~~~el~ 336 (453)
T 2xr7_A 258 LTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQF-NPPLPPSYFGNALVGYVARTRQVDLA 336 (453)
T ss_dssp HHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCS-SSCCCTTBCSCCCCEEEEEEEHHHHT
T ss_pred hhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccC-CCCCCcccccceeeeeeeeeeHHHhc
Confidence 6432 47999999999999999999986 677899999999999999 99999999999999999999999999
Q ss_pred c-CcHHHHHHHHHHHHHh--CCHH-HHHHHHHHHHHhccccccCCCCcEEEecCCCCCCCcccccCCccceeeeccc-cc
Q 036972 142 K-NPIGYAVELVKKAKAQ--MNEE-YIRSVADLMVIKGRRIKSSTRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGA-VA 216 (275)
Q Consensus 142 ~-~~l~~~A~~IR~ai~~--~~~e-~v~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~GkP~~~~~~~~-~~ 216 (275)
+ .+|+++|.+||++|.+ ++++ |+++ +|++.... .+ ....+.+|||+++++|++|||||+|+++++... ..
T Consensus 337 ~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~-~~--~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~ 411 (453)
T 2xr7_A 337 GKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDK-VD--AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDND 411 (453)
T ss_dssp SSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCC-SC--GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSC
T ss_pred CcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHh-hc--cCCcEEEeccccCCccccccCCCcceEEEeeeecCC
Confidence 5 8999999999999999 5788 9888 77753111 11 234789999999999999999999999998763 45
Q ss_pred e--EEEEEecCCCCCCCcEEEEEecCHHHHHHHHHHHHHHH
Q 036972 217 V--FSFCVKYQSKNGEPGILVPICLPQSAMERFQEELKRLM 255 (275)
Q Consensus 217 ~--~~~ilp~~~~~G~~g~ev~v~L~~~~m~~l~~d~~~l~ 255 (275)
| .++++|+++++| |++|.|+|++++|++|++++..++
T Consensus 412 g~~~~~l~~~~~~~g--gi~v~v~L~~~~m~~f~~~~~~~~ 450 (453)
T 2xr7_A 412 DGISMSLSKSKDSDG--DLEIGLSLSKTRMNAFAAMFTHGI 450 (453)
T ss_dssp SSCEEEEEECSSSTT--CEEEEECCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEeecCCCCC--CEEEEEEeCHHHHHHHHHHHHHHh
Confidence 6 777888776666 999999999999999999887755
No 3
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.2e-44 Score=340.51 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=199.6
Q ss_pred CcccccCCCCCC---CCCCCCCcccCC---CCCCCCCCCCccccccCCC---CCCCCCceEEEEEeCHhhHHHHHhhCCC
Q 036972 1 MEDMARGERSPT---VFPIWQRQILNA---RNPPQVTCIHHEYDEINTN---EVPSDNMAHKSFFFSLKGIKALRNQLPF 71 (275)
Q Consensus 1 wa~~~Rg~~~~~---~~P~~dR~~~~~---r~pp~~~~~~~~~~~~~~~---~~~~~~~~~~~f~fs~~~i~~Lk~~a~~ 71 (275)
||++|||...+. .+|+|||+.+.+ |.+|.+.++|+++...+.. .....++.+++|+|++++|++||+++.+
T Consensus 171 wa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~ 250 (451)
T 2rkv_A 171 LSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDAATK 250 (451)
T ss_dssp HHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHHHHHHHHHhh
Confidence 899999974321 268999985544 3556556777766543211 1123568899999999999999999865
Q ss_pred CC----CCCchHHHHHHHHHHHHHHhc-C-CCCCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhhcCcH
Q 036972 72 HL----KDCSTFELLLAFLWKCRTIAL-K-LQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLCKNPI 145 (275)
Q Consensus 72 ~~----~~~St~d~l~A~iW~~~~rAr-~-~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~~~~l 145 (275)
+. .++|+||+|+||+|+|++||| . .++++++++.++||+|+|+ + +|++|+||++..+.+.++++||.+.+|
T Consensus 251 ~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl-~--lP~~y~GN~~~~~~~~~~~~el~~~~L 327 (451)
T 2rkv_A 251 TLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAM-G--VSNNYPGLLQNMTYHNSTIGEIANESL 327 (451)
T ss_dssp TCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHH-T--CCTTCCSCCEEEEEEEEEHHHHHHSCH
T ss_pred hccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccC-C--CCCCCcccceeeecccCcHHHhccchH
Confidence 42 469999999999999999998 3 5678899999999999999 4 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCHHH-HHHHHHHHHH-hcccc--cc--C-CCCcEEEecCCCCCCCccccc--CCccceeeecc--c
Q 036972 146 GYAVELVKKAKAQMNEEY-IRSVADLMVI-KGRRI--KS--S-TRGNFIVSDLRNVGLGDVDFG--WGKPIYGGAAG--A 214 (275)
Q Consensus 146 ~~~A~~IR~ai~~~~~e~-v~~~~~~~~~-~~~~~--~~--~-~~~~~~vssw~~~~~y~~DFG--~GkP~~~~~~~--~ 214 (275)
+++|.+||++|.++++++ +++.++|++. .+... +. . ...++.+|||+++++|++||| ||+|++++.+. .
T Consensus 328 ~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~ 407 (451)
T 2rkv_A 328 GATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEP 407 (451)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSCSEEECCBCSC
T ss_pred HHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCCCCCceEEEcCCccC
Confidence 999999999999998888 9999999975 22221 11 0 245799999999999999998 89999998544 2
Q ss_pred cceEEEEEecCCCCCCCcEEEEEecCHHHHHHHHHHHHHH
Q 036972 215 VAVFSFCVKYQSKNGEPGILVPICLPQSAMERFQEELKRL 254 (275)
Q Consensus 215 ~~~~~~ilp~~~~~G~~g~ev~v~L~~~~m~~l~~d~~~l 254 (275)
..|.++++|. +++| |++|.|+|++++|++|++|.+++
T Consensus 408 ~~g~~~~~p~-~~~g--gi~v~v~L~~~~m~~f~~d~ef~ 444 (451)
T 2rkv_A 408 VESLMYFMPK-KPDG--EFCAALSLRDEDMDRLKADKEWT 444 (451)
T ss_dssp CTTEEEECCC-CTTS--CEEEEEEEEHHHHHHHHHCHHHH
T ss_pred CCCEEEEecC-CCCC--CEEEEEEeCHHHHHHHhcCHHHH
Confidence 5677888874 3445 99999999999999999998765
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.3e-45 Score=345.90 Aligned_cols=242 Identities=18% Similarity=0.295 Sum_probs=188.6
Q ss_pred Cccccc-CCC-----CCCCCCCCCCcccCCCCCCCCCCCCcc-cccc-------CCCCCCCCCceEEEEEeCHhhHHHHH
Q 036972 1 MEDMAR-GER-----SPTVFPIWQRQILNARNPPQVTCIHHE-YDEI-------NTNEVPSDNMAHKSFFFSLKGIKALR 66 (275)
Q Consensus 1 wa~~~R-g~~-----~~~~~P~~dR~~~~~r~pp~~~~~~~~-~~~~-------~~~~~~~~~~~~~~f~fs~~~i~~Lk 66 (275)
||++|| |.. .++.+|+||| +++ +|+ ....+.+ +... +.....+.++.+++|+|++++|++||
T Consensus 185 wa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK 260 (454)
T 2e1v_A 185 WTSIARSGNNDESFLANGTRPLYDR-IIK--YPM-LDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLK 260 (454)
T ss_dssp HHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH-HHHHHHHHTTCTTHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHH
T ss_pred HHHHhccCCCccccCCCCCCCcccc-cCC--CCC-cchHHHHhhhccccccccCcccCCCCCCceEEEEEECHHHHHHHH
Confidence 899999 763 1256799999 775 444 2111110 1000 00000234678999999999999999
Q ss_pred hhCCCCC---CCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhhc-
Q 036972 67 NQLPFHL---KDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLCK- 142 (275)
Q Consensus 67 ~~a~~~~---~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~~- 142 (275)
+++.++. .++|+||+|+||+|+|++||| +++.+++.++||+|+|+ +||+|++|+||++..+.+.++++||.+
T Consensus 261 ~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~vd~R~rl-~pplP~~Y~GN~~~~~~~~~~~~el~~~ 336 (454)
T 2e1v_A 261 DRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARM-KPPIPTAYFGNCVGGCAAIAKTNLLIGK 336 (454)
T ss_dssp HHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEEECGGGS-SSCCCTTBCSCCEEEEEEEEEGGGTSHH
T ss_pred HHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEecchhcc-CCCCCcccccceeeeEEeecchhhcccc
Confidence 9886432 469999999999999999999 67899999999999999 999999999999999999999999985
Q ss_pred CcHHHHHHHHHHHHHhCCHHH----HHH-HHHHHHHhccccccCCCCcEEEecCCCCCCCcccccCCccceeeeccc-cc
Q 036972 143 NPIGYAVELVKKAKAQMNEEY----IRS-VADLMVIKGRRIKSSTRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGA-VA 216 (275)
Q Consensus 143 ~~l~~~A~~IR~ai~~~~~e~----v~~-~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~GkP~~~~~~~~-~~ 216 (275)
.+|+++|.+||++|.+++++| +++ +.+|++... ..+ ....+.+|||+++++|++|||||||+++++... ..
T Consensus 337 ~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~ 413 (454)
T 2e1v_A 337 EGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVS-EGM--PTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHN 413 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHH-HCC--CSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGS
T ss_pred ccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH-hhc--CCceEEEecCCCCCcccccccCccceEEEeeeeCCC
Confidence 899999999999999987555 444 555654311 111 234899999999999999999999999998763 56
Q ss_pred eEEEEEecCCCCCCCcEEEEEecCHHHHHHHHHHHHHHH
Q 036972 217 VFSFCVKYQSKNGEPGILVPICLPQSAMERFQEELKRLM 255 (275)
Q Consensus 217 ~~~~ilp~~~~~G~~g~ev~v~L~~~~m~~l~~d~~~l~ 255 (275)
|.++++|+++++| |++|.|+|++++|++|++++..++
T Consensus 414 g~~~l~p~~~~~g--gi~v~v~L~~~~m~~f~~~~~~~~ 450 (454)
T 2e1v_A 414 GAISINSCKESNE--DLEIGVCISATQMEDFVHIFDDGL 450 (454)
T ss_dssp SEEEEEECSSCTT--SEEEEEEEEHHHHHHHHHHHHHHC
T ss_pred CeEEEEecCCCCC--CEEEEEEECHHHHHHHHHHHHHHH
Confidence 7788889877666 999999999999999998887654
No 5
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.9e-44 Score=334.63 Aligned_cols=228 Identities=21% Similarity=0.289 Sum_probs=187.1
Q ss_pred CcccccCCCCCCCCCCCCC-cccC-C-CCCCCCCCCCccccccCCCCCCCCCceEEEEEeCHhhHHHHHhhCCCCC--CC
Q 036972 1 MEDMARGERSPTVFPIWQR-QILN-A-RNPPQVTCIHHEYDEINTNEVPSDNMAHKSFFFSLKGIKALRNQLPFHL--KD 75 (275)
Q Consensus 1 wa~~~Rg~~~~~~~P~~dR-~~~~-~-r~pp~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~Lk~~a~~~~--~~ 75 (275)
||++|||...+ .+|+||| +.+. + +++|. +.. ....++.+++|+|++++|++||+++.++. .+
T Consensus 175 wa~~~rg~~~~-~~P~~dr~~~l~p~~~~~~~-----~~~-------~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~ 241 (421)
T 2bgh_A 175 WTATCRGETEI-VLPNFDLAARHFPPVDNTPS-----PEL-------VPDENVVMKRFVFDKEKIGALRAQASSASEEKN 241 (421)
T ss_dssp HHHHHTTCSCC-CCCBCSHHHHHSCCCTTCCC-----CCC-------CCCSSEEEEEEEECHHHHHHHHHHTC-----CC
T ss_pred HHHHhcCCCCC-CCCccccccccCCCcccCCC-----Ccc-------CCccceEEEEEEECHHHHHHHHHHhhccCCCCC
Confidence 89999997543 6899999 6443 3 34332 111 12346889999999999999999997653 47
Q ss_pred CchHHHHHHHHHHHHHHhcCCC--CCCcEEEEEEEecCCCCCCCCCCCCCcccceeccccccchhhhhcCcHHHHHHHHH
Q 036972 76 CSTFELLLAFLWKCRTIALKLQ--PEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFTFSAVCSTAEQLCKNPIGYAVELVK 153 (275)
Q Consensus 76 ~St~d~l~A~iW~~~~rAr~~~--~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~~~~~~~~~~~l~~~~l~~~A~~IR 153 (275)
+|+||+|+||+|+|++|||+.. +++++++.++||+|+|+ +||+|++|+||++..+.+.+++++ +.+|+++|.+||
T Consensus 242 ~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl-~pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir 318 (421)
T 2bgh_A 242 FSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRM-NPPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLR 318 (421)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGS-SSCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHH
T ss_pred CchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCcccc-CCCCCCCccceEEEEEEEEecccc--cccHHHHHHHHH
Confidence 9999999999999999998753 56789999999999999 999999999999999988888775 789999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHhccccccCCCCcEEEecCCCCCCCcccccCCccceeeeccc-cceEEEEEecCCCCCCCc
Q 036972 154 KAKAQMNEEYIRSVADLMVIKGRRIKSSTRGNFIVSDLRNVGLGDVDFGWGKPIYGGAAGA-VAVFSFCVKYQSKNGEPG 232 (275)
Q Consensus 154 ~ai~~~~~e~v~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~GkP~~~~~~~~-~~~~~~ilp~~~~~G~~g 232 (275)
++|.++++++++++.++.+.... .. ....+.+|||+++++|++|||||+|+++++... .+|.++++|++++ + |
T Consensus 319 ~ai~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~-~--g 392 (421)
T 2bgh_A 319 TSLEKTEDDHNHELLKGMTCLYE--LE-PQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSG-D--G 392 (421)
T ss_dssp HHTCCCSSCHHHHHHHHHHHHHT--SC-GGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTS-S--S
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc--cC-CCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCC-C--e
Confidence 99999999999988887653211 11 124689999999999999999999999998763 5788888998753 2 7
Q ss_pred EEEEEecCHHHHHHHHHH
Q 036972 233 ILVPICLPQSAMERFQEE 250 (275)
Q Consensus 233 ~ev~v~L~~~~m~~l~~d 250 (275)
++|.|+|++++|++|+++
T Consensus 393 i~v~v~L~~~~m~~f~~e 410 (421)
T 2bgh_A 393 VEAWLPMAEDEMAMLPVE 410 (421)
T ss_dssp EEEEEEEEHHHHHHSCHH
T ss_pred EEEEEEcCHHHHHHHHHH
Confidence 999999999999999984
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=92.88 E-value=0.88 Score=40.55 Aligned_cols=99 Identities=11% Similarity=-0.035 Sum_probs=66.1
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCC----CCCcc
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIP----PGYYG 125 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp----~~Y~G 125 (275)
.....+.++.+..++|++.|.+. .+|.+.++.|.+-..+.|-+. .......+.++++.|... .|+++ .+.+|
T Consensus 211 ~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~-~~~~~~~~~~~~vG 286 (422)
T 1q9j_A 211 VPVTRLWLSKQQTSDLMAFGREH--RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVL-APPVAPTEATNLLG 286 (422)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTS-SSCCCTTTBSCCEE
T ss_pred ccceEEEeCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeeccccc-CCCCChhhhhhhhe
Confidence 45688899999999999988753 478999998876666665422 334678899999999987 65543 23444
Q ss_pred cceeccccccchhhhhcCcHHHHHHHHHHHHHh
Q 036972 126 NAFTFSAVCSTAEQLCKNPIGYAVELVKKAKAQ 158 (275)
Q Consensus 126 N~v~~~~~~~~~~~l~~~~l~~~A~~IR~ai~~ 158 (275)
..+... +.. .+.++.+++..+++.+.+
T Consensus 287 ~f~n~l----p~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 287 AASYLA----EIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp EEEEEE----CCC--SSCCHHHHHHHHHHHHHH
T ss_pred eeeeee----ecc--CCCCHHHHHHHHHHHHHH
Confidence 443222 111 124567777777766653
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=92.79 E-value=0.14 Score=48.38 Aligned_cols=83 Identities=17% Similarity=0.044 Sum_probs=59.1
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCC-CCCCchHHHHHHHHHHHHHHhcC---CCCCCcEEEEEEEecCCCCCCCCCCCCCcc
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFH-LKDCSTFELLLAFLWKCRTIALK---LQPEEIAKVSCIVNVRGKRYKMDIPPGYYG 125 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~-~~~~St~d~l~A~iW~~~~rAr~---~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~G 125 (275)
-....+.|++++.++|++.|.+. .+.+|-..+|.|.+-.++.+... ........+.++||+|+.+ .++.-.+|||
T Consensus 277 ~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l-~~~~~~n~~~ 355 (519)
T 3fot_A 277 PRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWL-REDIASNFYA 355 (519)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGB-CHHHHTSCCS
T ss_pred cceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccC-CCcccccccc
Confidence 34577899999999999999764 23578888887766666555322 1223357889999999999 6655557888
Q ss_pred cceecccc
Q 036972 126 NAFTFSAV 133 (275)
Q Consensus 126 N~v~~~~~ 133 (275)
.++....+
T Consensus 356 ~~~~~~~~ 363 (519)
T 3fot_A 356 MCQTAAVV 363 (519)
T ss_dssp CCEEEEEE
T ss_pred eeeeeeee
Confidence 87665443
No 8
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=80.32 E-value=18 Score=32.32 Aligned_cols=103 Identities=13% Similarity=-0.043 Sum_probs=68.2
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCC-CCCCCCcccce
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKM-DIPPGYYGNAF 128 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p-~lp~~Y~GN~v 128 (275)
.....+.++++..++|++.+... ..+|.++++.|.+-..+.+-.+ .....+.++++.|... .+ +--.+-+|+.+
T Consensus 233 ~~~~~~~l~~~~~~~l~~~~~~~-~~~t~~~~llaa~~~~l~~~~~---~~dv~ig~~~~gR~~~-~~~~~~~~~vG~f~ 307 (466)
T 2xhg_A 233 VRNMRIRLHPEETEQLLKHANQA-YQTEINDLLLAALGLAFAEWSK---LAQIVIHLEGHGREDI-IEQANVARTVGWFT 307 (466)
T ss_dssp EEEEEEECCHHHHHHHHHTGGGT-TTCCHHHHHHHHHHHHHHHHHC---CSEEEEEEEECCCCSC-STTCCCTTCCSCCC
T ss_pred ceEEEEEcCHHHHHHHHHHhHHh-hCCCHHHHHHHHHHHHHHHHhC---CCceEEEecCCCCCcc-ccCCCcccccccee
Confidence 35678899999999998876421 2478899888876666655533 3568889999999864 21 11234566655
Q ss_pred eccccccchhhhhcCcHHHHHHHHHHHHHhC
Q 036972 129 TFSAVCSTAEQLCKNPIGYAVELVKKAKAQM 159 (275)
Q Consensus 129 ~~~~~~~~~~~l~~~~l~~~A~~IR~ai~~~ 159 (275)
-......... .+.++.+++..|++.+..+
T Consensus 308 n~lplr~~~~--~~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 308 SQYPVLLDLK--QTAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp EEEEEEEECS--CCCSHHHHHHHHHHHHHHS
T ss_pred eeccEEEecC--CCCCHHHHHHHHHHHHHhC
Confidence 4333333222 1357888899999988776
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=76.16 E-value=10 Score=33.70 Aligned_cols=97 Identities=10% Similarity=-0.063 Sum_probs=63.8
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCccccee
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFT 129 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~ 129 (275)
.....+.++.+..++|++.+.+. .+|.+.++.|.+-..+.+-. . ..+.+..+++.|..- .+ .+-+|+++-
T Consensus 208 ~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~L~~~~---g-~dv~ig~~~~~R~~~---~~-~~~vG~f~n 277 (436)
T 1l5a_A 208 AVSLSYTLNSQLNHLLLKLANAN--QIGWPDALVALCALYLESAE---P-DAPWLWLPFMNRWGS---VA-ANVPGLMVN 277 (436)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHS---T-TCCEEEEEECCCTTS---GG-GGSCSCCCE
T ss_pred ceeeEEecCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHhh---C-CceEEeeecccCCCh---HH-hcCcceEEE
Confidence 45778899999999999887642 47889988887655555543 3 567899999999643 22 345565543
Q ss_pred ccccccchhhhhcCcHHHHHHHHHHHHHh
Q 036972 130 FSAVCSTAEQLCKNPIGYAVELVKKAKAQ 158 (275)
Q Consensus 130 ~~~~~~~~~~l~~~~l~~~A~~IR~ai~~ 158 (275)
......... .+.++.+++..+++.+.+
T Consensus 278 ~lplr~~~~--~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 278 SLPLLRLSA--QQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp EEEEECCCC--TTCBHHHHHHHHHHHHHH
T ss_pred EEEEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 333332222 134677777777776654
No 10
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=71.45 E-value=14 Score=33.75 Aligned_cols=98 Identities=12% Similarity=-0.007 Sum_probs=64.0
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCccccee
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFT 129 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~ 129 (275)
.....+.++.+..++|++.+.+. .+|.+.++.|.+-..+.+-.+ ...+.+.++++.|..- .+ ++-+|+++-
T Consensus 303 ~~~~~~~l~~~~~~~l~~~a~~~--~~T~~~~l~aa~a~~L~~~~~---~~dv~~g~~~~gR~~~---~~-~~~vG~f~n 373 (520)
T 2jgp_A 303 GDQCTIGAGKALTEGLHQLAQAT--GTTLYMVLLAAYNVLLAKYAG---QEDIIVGTPITGRSHA---DL-EPIVGMFVN 373 (520)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHH--TCCHHHHHHHHHHHHHHHHHT---CSCEEEEEEECCCCSG---GG-TTCCSCCCE
T ss_pred ccEEEEeCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC---CCCeEEEeccCCCCch---hh-hccEEeeee
Confidence 45678899999999999887542 478898888866555555533 3568899999999753 22 345566544
Q ss_pred ccccccchhhhhcCcHHHHHHHHHHHHHh
Q 036972 130 FSAVCSTAEQLCKNPIGYAVELVKKAKAQ 158 (275)
Q Consensus 130 ~~~~~~~~~~l~~~~l~~~A~~IR~ai~~ 158 (275)
......... .+.++.+++..+++.+.+
T Consensus 374 ~lplr~~~~--~~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 374 TLAMRNKPQ--REKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EEEEEECCC--TTSBHHHHHHHHHHHHHH
T ss_pred eeeEEecCC--CCCCHHHHHHHHHHHHHH
Confidence 333333222 134677777777776543
No 11
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=68.90 E-value=12 Score=33.97 Aligned_cols=103 Identities=10% Similarity=-0.062 Sum_probs=60.7
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCc--hHHHHHHHHHHHHHHhcC-C-------CCCCcEEEEEEEecCCCCCCCCC
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCS--TFELLLAFLWKCRTIALK-L-------QPEEIAKVSCIVNVRGKRYKMDI 119 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~S--t~d~l~A~iW~~~~rAr~-~-------~~~~~~~l~~~vd~R~rl~~p~l 119 (275)
.....+.++.+..++|++.|.+. .+| .+.++.|.+-..+.+-+. . .....+.+.++++.|..- .+
T Consensus 215 ~~~~~~~l~~~~~~~l~~~a~~~--~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~~ 289 (493)
T 4hvm_A 215 PETSRLRVPGSRWQALTEPGGPL--GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---QL 289 (493)
T ss_dssp CEEEEEEEEHHHHHHHHCC--------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---TC
T ss_pred CeeEEEEcCHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---ch
Confidence 56778999999999999888653 377 888888865554444310 0 334578899999999643 22
Q ss_pred CCCCcccceeccccccchhhhhcCcHHHHHHHHHHHHHh
Q 036972 120 PPGYYGNAFTFSAVCSTAEQLCKNPIGYAVELVKKAKAQ 158 (275)
Q Consensus 120 p~~Y~GN~v~~~~~~~~~~~l~~~~l~~~A~~IR~ai~~ 158 (275)
.+.+|+++-............+.++.+++..+++.+.+
T Consensus 290 -~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 290 -GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp -CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred -hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 45667665444333332221135677777777776654
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=58.16 E-value=34 Score=35.56 Aligned_cols=100 Identities=10% Similarity=-0.088 Sum_probs=65.0
Q ss_pred ceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEecCCCCCCCCCCCCCccccee
Q 036972 50 MAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKLQPEEIAKVSCIVNVRGKRYKMDIPPGYYGNAFT 129 (275)
Q Consensus 50 ~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~v~ 129 (275)
.....|.++++..++||+.|.+. .+|.+.++.|.+-..+.|-.+ .+.+.+..++..|... .+.+ ++-+|+.+-
T Consensus 228 ~~~~~~~l~~~~~~~L~~~a~~~--~~T~~~vllaa~a~~L~r~tg---~~dvv~G~pvsgR~~~-~~~~-~~~vG~fvn 300 (1304)
T 2vsq_A 228 PKELLFSPSEAETKAFTELAKSQ--HTTLSTALQAVWSVLISRYQQ---SGDLAFGTVVSGRPAE-IKGV-EHMVGLFIN 300 (1304)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHT---CSEEEEEEEECCCCTT-STTG-GGCCSSCCE
T ss_pred cceEEEecCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC---CCCEEEEEEeCCCCcc-chhh-hccccccee
Confidence 45677889999999999987643 478888888865455554433 4578899999999864 3333 344555543
Q ss_pred ccccccchhhhhcCcHHHHHHHHHHHHHh
Q 036972 130 FSAVCSTAEQLCKNPIGYAVELVKKAKAQ 158 (275)
Q Consensus 130 ~~~~~~~~~~l~~~~l~~~A~~IR~ai~~ 158 (275)
......... .+.++.++...+++...+
T Consensus 301 tlplr~~~~--~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 301 VVPRRVKLS--EGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp EEEEEEECC--TTCBHHHHHHHHHHHHHH
T ss_pred EEEEEecCC--CCCcHHHHHHHHHHHHHH
Confidence 333222222 135788888888876654
No 13
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=45.03 E-value=14 Score=18.90 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=14.4
Q ss_pred CchHHHHHHHHHHHHHH
Q 036972 76 CSTFELLLAFLWKCRTI 92 (275)
Q Consensus 76 ~St~d~l~A~iW~~~~r 92 (275)
+++.|-|+-|+|+++..
T Consensus 8 ftsqdylsdhlwralna 24 (26)
T 2xl1_A 8 FTSQDYLSDHLWRALNA 24 (26)
T ss_pred eecHHHHHHHHHHHHhc
Confidence 67889999999998753
No 14
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=42.08 E-value=21 Score=21.99 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=25.8
Q ss_pred EEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhc
Q 036972 52 HKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIAL 94 (275)
Q Consensus 52 ~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr 94 (275)
.-.|+||.++-+.|++.|.++...+++ +|=+.+.++.
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE~eSV~s------fIKR~IlK~l 39 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEEEESVGS------YIKRYILKAL 39 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHTTSCTTH------HHHHHHHHHH
T ss_pred eEEEEecHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH
Confidence 567999999999999998765433443 4445555553
No 15
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=20.99 E-value=67 Score=20.45 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=31.2
Q ss_pred CceEEEEEeCHhhHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHhcCC
Q 036972 49 NMAHKSFFFSLKGIKALRNQLPFHLKDCSTFELLLAFLWKCRTIALKL 96 (275)
Q Consensus 49 ~~~~~~f~fs~~~i~~Lk~~a~~~~~~~St~d~l~A~iW~~~~rAr~~ 96 (275)
.--.-.|+||.|+-+.|.+.|.++. |.|..+|=+.+.++...
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE~------eSV~sfIKR~IlK~l~y 55 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEEV------ESVNSFVKRHILKTIIY 55 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHCS
T ss_pred cceEEEEEecHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 4456789999999999999987653 23566677777777654
Done!