BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036976
         (243 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3AE0|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Geranylgeranyl Thiopyrophosphate
 pdb|3AE0|B Chain B, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Geranylgeranyl Thiopyrophosphate
          Length = 293

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)

Query: 63  YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
           +E   EL+ YCY VAGTVG +  P++     S       Y+ A  LG   QL N LRDVG
Sbjct: 126 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 180

Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
           ED    R+Y  + +L Q+ +   +V+   V +++ +  +     A   F    +      
Sbjct: 181 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 240

Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
            +++  +  +  IY EILD + + +Y  L +R +V + KK
Sbjct: 241 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 279


>pdb|4F6V|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Bph-1034, Mg2+ And Fmp.
 pdb|4F6X|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Bph-1112
          Length = 292

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)

Query: 63  YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
           +E   EL+ YCY VAGTVG +  P++     S       Y+ A  LG   QL N LRDVG
Sbjct: 125 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 179

Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
           ED    R+Y  + +L Q+ +   +V+   V +++ +  +     A   F    +      
Sbjct: 180 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 239

Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
            +++  +  +  IY EILD + + +Y  L +R +V + KK
Sbjct: 240 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 278


>pdb|2ZCO|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus
 pdb|2ZCP|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Farnesyl Thiopyrophosphate
 pdb|2ZCP|B Chain B, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Farnesyl Thiopyrophosphate
 pdb|2ZCQ|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-652
 pdb|2ZCR|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-698
 pdb|2ZCS|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-700
 pdb|2ZY1|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bisphosphonate Bph-830
 pdb|3ACW|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bph-651
 pdb|3ACX|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bph-673
 pdb|3ACY|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Bph-702
 pdb|3NPR|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From S. Aureus Complexed With Presqualene
           Diphosphate (Pspp)
 pdb|3NRI|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From S. Aureus Complexed With Dehydrosqualene
           (Dhs)
 pdb|3TFN|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Bph-1183
 pdb|3TFP|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Bph-1162
 pdb|3TFV|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Bph-1154
          Length = 293

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)

Query: 63  YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
           +E   EL+ YCY VAGTVG +  P++     S       Y+ A  LG   QL N LRDVG
Sbjct: 126 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 180

Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
           ED    R+Y  + +L Q+ +   +V+   V +++ +  +     A   F    +      
Sbjct: 181 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 240

Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
            +++  +  +  IY EILD + + +Y  L +R +V + KK
Sbjct: 241 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 279


>pdb|4E9U|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With A Thiocyanate Inhibitor
 pdb|4E9Z|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Quinuclidine Bph-651 In The S1
           Site
 pdb|4EA0|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Diphosphate And Quinuclidine
           Bph-651
 pdb|4EA0|B Chain B, Crystal Structure Of Dehydrosqualene Synthase (Crtm) From
           S. Aureus Complexed With Diphosphate And Quinuclidine
           Bph-651
 pdb|4EA1|A Chain A, Co-Crystal Structure Of Dehydrosqualene Synthase (Crtm)
           From S. Aureus With Sq-109
 pdb|4EA2|A Chain A, Crystal Structure Of Dehydrosqualene Synthase (Crtm)
           Aureus Complexed With Sq-109
          Length = 287

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)

Query: 63  YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
           +E   EL+ YCY VAGTVG +  P++     S       Y+ A  LG   QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174

Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
           ED    R+Y  + +L Q+ +   +V+   V +++ +  +     A   F    +      
Sbjct: 175 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 234

Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
            +++  +  +  IY EILD + + +Y  L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 273


>pdb|4HD1|A Chain A, Crystal Structure Of Squalene Synthase Hpnc From
           Alicyclobacillus Acidocaldarius
          Length = 294

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 23/235 (9%)

Query: 17  VLDRWEERLQDIFYGRPYDMLDAAL--TDAVFKFPLDIKMRM------DTRKFRYENLQE 68
            LD +EE L+  F G        AL  T A    P +  +R+      D RK  Y+  ++
Sbjct: 68  ALDAYEEELRRAFAGEATTPAFRALQFTIATCNLPXEPFLRLIEANRRDQRKHTYDTWED 127

Query: 69  LYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRG 128
           L  YC Y A  VG + + + G   D  +        AL      Q+ N  +D+  D + G
Sbjct: 128 LRDYCRYSADPVGRLVLGIFGCLDDERARLSDATCTAL------QVANHXQDIDRDLALG 181

Query: 129 RVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWP 188
           R+Y+P+  L QF     D+ AR+ TD  R  +  ++ RA+  F+   EG  +L+      
Sbjct: 182 RIYVPRADLEQFGATLDDIRARRATDGVRRCIALEVDRAQALFD---EG-RRLESLVPPR 237

Query: 189 VWSSLLIYR----EILDAIEENDYDNLTKRAYV-GRMKKYLMLPQAYNRTQSKGS 238
           +   L +YR     IL AI    Y+    R  V G+ K  + L       + +G 
Sbjct: 238 LARQLKLYRLGGEAILAAIRRQGYNPFAGRPVVSGKQKLRIALSVLAGGAKGEGG 292


>pdb|3VJD|A Chain A, Crystal Structure Of The Y248a Mutant Of C(30) Carotenoid
           Dehydrosqualene Synthase From Staphylococcus Aureus
 pdb|3VJE|A Chain A, Crystal Structure Of The Y248a Mutant Of C(30) Carotenoid
           Dehydrosqualene Synthase From Staphylococcus Aureus In
           Complex With Zaragozic Acid A
 pdb|3VJE|B Chain B, Crystal Structure Of The Y248a Mutant Of C(30) Carotenoid
           Dehydrosqualene Synthase From Staphylococcus Aureus In
           Complex With Zaragozic Acid A
          Length = 293

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 63  YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
           +E   EL+ YCY VAGTVG +  P++     S       Y+ A  LG   QL N LRDVG
Sbjct: 126 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 180

Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
           ED    R+Y  + +L Q+ +   +V+   V +++ +  +     A   F    +      
Sbjct: 181 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 240

Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
            +++  +  +  I  EILD + + +Y  L +R +V + KK
Sbjct: 241 IEAQPIIELAARIAIEILDEVRQANY-TLHERVFVEKRKK 279


>pdb|3ADZ|A Chain A, Crystal Structure Of The C(30) Carotenoid Dehydrosqualene
           Synthase From Staphylococcus Aureus Complexed With
           Intermediate Pspp
 pdb|3LGZ|B Chain B, Crystal Structure Of Dehydrosqualene Synthase Y129a From
           S. Aureus Complexed With Presqualene Pyrophosphate
          Length = 293

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 63  YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
           +E   EL+  CY VAGTVG +  P++     S       Y+ A  LG   QL N LRDVG
Sbjct: 126 FETDAELFGACYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 180

Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
           ED    R+Y  + +L Q+ +   +V+   V +++ +  +     A   F    +      
Sbjct: 181 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 240

Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
            +++  +  +  IY EILD + + +Y  L +R +V + KK
Sbjct: 241 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 279


>pdb|1EZF|A Chain A, Crystal Structure Of Human Squalene Synthase
 pdb|1EZF|B Chain B, Crystal Structure Of Human Squalene Synthase
 pdb|1EZF|C Chain C, Crystal Structure Of Human Squalene Synthase
          Length = 340

 Score = 38.1 bits (87), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 37/75 (49%)

Query: 67  QELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDAS 126
           QE   YC+YVAG VG+    +   +             A ++G+  Q TN +RD  ED  
Sbjct: 136 QEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ 195

Query: 127 RGRVYLPQDKLAQFV 141
            GR + PQ+  +++V
Sbjct: 196 GGREFWPQEVWSRYV 210


>pdb|3LEE|A Chain A, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 pdb|3LEE|B Chain B, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 pdb|3LEE|C Chain C, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 pdb|3LEE|D Chain D, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 pdb|3LEE|E Chain E, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 pdb|3LEE|F Chain F, Crystal Structure Of The Human Squalene Synthase Complexed
           With Bph- 652
 pdb|3ASX|A Chain A, Human Squalene Synthase In Complex With
           1-{4-[{4-Chloro-2-[(2-
           Chlorophenyl)(Hydroxy)methyl]phenyl}(2,
           2-Dimethylpropyl)amino]-4-
           Oxobutanoyl}piperidine-3-Carboxylic Acid
 pdb|3Q2Z|A Chain A, Human Squalene Synthase In Complex With
           N-[(3r,5s)-7-Chloro-5-(2,3-
           Dimethoxyphenyl)-1-Neopentyl-2-Oxo-1,2,3,5-Tetrahydro-4,
           1- Benzoxazepine-3-Acetyl]-L-Aspartic Acid
 pdb|3Q30|A Chain A, Human Squalene Synthase In Complex With
           (2r,3r)-2-Carboxymethoxy-3-[5-
           (2-Naphthalenyl)pentyl]aminocarbonyl-3-[5-(2-
           Naphthalenyl) Pentyloxy]propionic Acid
 pdb|3V66|A Chain A, Human Squalene Synthase In Complex With
           2-(1-{2-[(4r,6s)-8-Chloro-6-
           (2,3-Dimethoxyphenyl)-4h,6h-Pyrrolo[1,2-A][4,
           1]benzoxazepin-4- Yl]acetyl}-4-Piperidinyl)acetic Acid
          Length = 340

 Score = 38.1 bits (87), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 37/75 (49%)

Query: 67  QELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDAS 126
           QE   YC+YVAG VG+    +   +             A ++G+  Q TN +RD  ED  
Sbjct: 136 QEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ 195

Query: 127 RGRVYLPQDKLAQFV 141
            GR + PQ+  +++V
Sbjct: 196 GGREFWPQEVWSRYV 210


>pdb|3VJ8|A Chain A, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJ9|A Chain A, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJA|A Chain A, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJA|B Chain B, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJB|A Chain A, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJB|B Chain B, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJB|C Chain C, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJB|D Chain D, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJB|E Chain E, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJB|F Chain F, Crystal Structure Of The Human Squalene Synthase
 pdb|3VJC|A Chain A, Crystal Structure Of The Human Squalene Synthase In
           Complex With Zaragozic Acid A
 pdb|3VJC|B Chain B, Crystal Structure Of The Human Squalene Synthase In
           Complex With Zaragozic Acid A
 pdb|3VJC|C Chain C, Crystal Structure Of The Human Squalene Synthase In
           Complex With Zaragozic Acid A
 pdb|3VJC|D Chain D, Crystal Structure Of The Human Squalene Synthase In
           Complex With Zaragozic Acid A
 pdb|3VJC|E Chain E, Crystal Structure Of The Human Squalene Synthase In
           Complex With Zaragozic Acid A
 pdb|3VJC|F Chain F, Crystal Structure Of The Human Squalene Synthase In
           Complex With Zaragozic Acid A
          Length = 343

 Score = 37.7 bits (86), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 37/75 (49%)

Query: 67  QELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDAS 126
           QE   YC+YVAG VG+    +   +             A ++G+  Q TN +RD  ED  
Sbjct: 139 QEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQ 198

Query: 127 RGRVYLPQDKLAQFV 141
            GR + PQ+  +++V
Sbjct: 199 GGREFWPQEVWSRYV 213


>pdb|1Q15|A Chain A, Carbapenam Synthetase
 pdb|1Q15|B Chain B, Carbapenam Synthetase
 pdb|1Q15|C Chain C, Carbapenam Synthetase
 pdb|1Q15|D Chain D, Carbapenam Synthetase
 pdb|1Q19|A Chain A, Carbapenam Synthetase
 pdb|1Q19|B Chain B, Carbapenam Synthetase
 pdb|1Q19|C Chain C, Carbapenam Synthetase
 pdb|1Q19|D Chain D, Carbapenam Synthetase
          Length = 503

 Score = 32.7 bits (73), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 154 DNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLI 195
           DN  + + EQ+ R R     A  GAS    D R P WS  LI
Sbjct: 362 DNPNQLLAEQVYRTRWTGEFATHGASCYGIDIRHPFWSHSLI 403


>pdb|2O1E|A Chain A, Crystal Structure Of The Metal-Dependent Lipoprotein Ycdh
           From Bacillus Subtilis, Northeast Structural Genomics
           Target Sr583
 pdb|2O1E|B Chain B, Crystal Structure Of The Metal-Dependent Lipoprotein Ycdh
           From Bacillus Subtilis, Northeast Structural Genomics
           Target Sr583
          Length = 312

 Score = 30.0 bits (66), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 50  LDIKMRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSI 101
           LD   R   +K   +     +    Y+A   GL  VP+ G++PD   SA S+
Sbjct: 177 LDKLYRTTAKKAEKKEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASL 228


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.138    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,050,250
Number of Sequences: 62578
Number of extensions: 280170
Number of successful extensions: 700
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 666
Number of HSP's gapped (non-prelim): 26
length of query: 243
length of database: 14,973,337
effective HSP length: 96
effective length of query: 147
effective length of database: 8,965,849
effective search space: 1317979803
effective search space used: 1317979803
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)