BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036976
(243 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53797|PSY_NARPS Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus
GN=PSY PE=2 SV=1
Length = 423
Score = 329 bits (843), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/270 (60%), Positives = 195/270 (72%), Gaps = 34/270 (12%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
LLMT ERR+AIWAI V LDRWE RL+D+F GRPYDM DAA
Sbjct: 148 LLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSALDRWEARLEDLFAGRPYDMFDAA 207
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L+D V +FP+DI+ MRMD +K RY+N ELYLYCYYVAGTVGLMSVPVMGIAP
Sbjct: 208 LSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAP 267
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKV 152
+S + A+S+YN AL LG+ NQLTN LRDVGEDA RGR+YLPQD+LA+ L D+DVF KV
Sbjct: 268 ESLAEAESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDVFTGKV 327
Query: 153 TDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLT 212
TD WR FMK QIKRARTFF AE+G ++L + SRWPVW+SLL+YR+ILD IE NDY+N T
Sbjct: 328 TDKWRSFMKRQIKRARTFFEQAEKGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFT 387
Query: 213 KRAYVGRMKKYLMLPQAYNRTQSKGSLIFP 242
KRAYV ++K+ LP AY + SL+ P
Sbjct: 388 KRAYVSKVKRLAALPLAYGK-----SLLIP 412
>sp|P37271|PSY_ARATH Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1
PE=2 SV=2
Length = 422
Score = 324 bits (830), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/266 (60%), Positives = 192/266 (72%), Gaps = 29/266 (10%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
LLMT ERRKAIWAI V LDRWE RL+D+F GRP+DMLDAA
Sbjct: 151 LLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAA 210
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L D V ++P+DI+ MRMD +K RY+N +LYLYCYYVAGTVGLMSVPVMGI P
Sbjct: 211 LADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDP 270
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKV 152
S ++ +S+YN AL LG+ NQLTN LRDVGEDA RGRVYLPQD+LAQ L D+D+FA KV
Sbjct: 271 KSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKV 330
Query: 153 TDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLT 212
TD WR FMK Q+KRAR FF+ AE+G ++L SRWPVW+SLL+YR ILD IE NDY+N T
Sbjct: 331 TDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFT 390
Query: 213 KRAYVGRMKKYLMLPQAYNRTQSKGS 238
KRAYVG++KK LP AY ++ K S
Sbjct: 391 KRAYVGKVKKIAALPLAYAKSVLKTS 416
>sp|P49293|PSY_CUCME Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1
Length = 422
Score = 324 bits (830), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 190/262 (72%), Gaps = 30/262 (11%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
+LMT ER+KAIWAI V LDRWE RL+++F GRP+DMLDAA
Sbjct: 156 MLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARLEELFQGRPFDMLDAA 215
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L D V KFP+DI+ MRMD RK RY+N ELYLYCYYVAGTVGLMSVPVMGIAP
Sbjct: 216 LADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAP 275
Query: 93 DSSSSAQSIYNGALNLGVGNQLT-NFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARK 151
+S +S +S+YN AL LG+ NQ N LRDVGEDA RGR+YLPQD+LAQ L D+D+FA +
Sbjct: 276 ESQASTESVYNAALALGIANQAPPNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGR 335
Query: 152 VTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNL 211
VTD WR FMK QIKRAR FF+ AE+G +L+K SRWPVW+SLL+YR+ILD IE NDYDN
Sbjct: 336 VTDKWRNFMKNQIKRARMFFDEAEKGVLELNKASRWPVWASLLLYRQILDEIEANDYDNF 395
Query: 212 TKRAYVGRMKKYLMLPQAYNRT 233
TKRAYV + KK L LP AY R
Sbjct: 396 TKRAYVSKAKKILALPMAYGRA 417
>sp|P37272|PSY_CAPAN Phytoene synthase, chloroplastic OS=Capsicum annuum GN=PSY1 PE=2
SV=1
Length = 419
Score = 322 bits (825), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/261 (61%), Positives = 192/261 (73%), Gaps = 29/261 (11%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
+LMT ERRKAIWAI V LDRWE+RL+D+F GRP+DMLDAA
Sbjct: 152 MLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPAALDRWEDRLEDVFSGRPFDMLDAA 211
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L+D V KFP+DI+ MRMD RK RY N ELYLYCYYVAGTVGLMSVP+MGIAP
Sbjct: 212 LSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDELYLYCYYVAGTVGLMSVPIMGIAP 271
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKV 152
+S ++ +S+YN AL LG+ NQLTN LRDVGEDA RGRVYLPQD+LAQ L D+D+FA +V
Sbjct: 272 ESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRV 331
Query: 153 TDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLT 212
TD WR FMK+QI+RAR FF+ AE+G ++L SRWPV +SLL+YR ILD IE NDY+N T
Sbjct: 332 TDKWRIFMKKQIQRARKFFDEAEKGVTELSAASRWPVLASLLLYRRILDEIEANDYNNFT 391
Query: 213 KRAYVGRMKKYLMLPQAYNRT 233
KRAYV + KK + LP AY ++
Sbjct: 392 KRAYVSKPKKLIALPIAYAKS 412
>sp|P49085|PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1
Length = 410
Score = 319 bits (818), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/270 (59%), Positives = 193/270 (71%), Gaps = 34/270 (12%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
+LMTEERR+AIWAI V LDRWE+RL+D+F GRPYDMLDAA
Sbjct: 138 MLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTALDRWEKRLEDLFTGRPYDMLDAA 197
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L+D + +FP+DI+ MR D RK RY N ELY+YCYYVAGTVGLMSVPVMGIA
Sbjct: 198 LSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNFDELYMYCYYVAGTVGLMSVPVMGIAT 257
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKV 152
+S ++ +S+Y+ AL LG+ NQLTN LRDVGEDA RGR+YLPQD+LAQ L D+D+F V
Sbjct: 258 ESKATTESVYSAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVV 317
Query: 153 TDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLT 212
T+ WR FMK QIKRAR FF AE G ++L + SRWPVW+SLL+YR+ILD IE NDY+N T
Sbjct: 318 TNRWRNFMKRQIKRARMFFEEAERGVNELSQASRWPVWASLLLYRQILDEIEANDYNNFT 377
Query: 213 KRAYVGRMKKYLMLPQAYNRTQSKGSLIFP 242
KRAYVG+ KK L LP AY + SL+ P
Sbjct: 378 KRAYVGKGKKLLALPVAYGK-----SLLLP 402
>sp|P08196|PSY1_SOLLC Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1
PE=1 SV=2
Length = 412
Score = 318 bits (816), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 191/262 (72%), Gaps = 29/262 (11%)
Query: 1 ALLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDA 39
+LMT ERR+AIWAI V LDRWE RL+D+F GRP+DMLD
Sbjct: 139 TMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPAALDRWENRLEDVFNGRPFDMLDG 198
Query: 40 ALTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIA 91
AL+D V FP+DI+ MRMD RK RY+N ELYLYCYYVAGTVGLMSVP+MGIA
Sbjct: 199 ALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGIA 258
Query: 92 PDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARK 151
P+S ++ +S+YN AL LG+ NQLTN LRDVGEDA RGRVYLPQD+LAQ L D+D+FA +
Sbjct: 259 PESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGR 318
Query: 152 VTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNL 211
VTD WR FMK+QI RAR FF+ AE+G ++L SR+PVW+SL++YR+ILD IE NDY+N
Sbjct: 319 VTDKWRIFMKKQIHRARKFFDEAEKGVTELSSASRFPVWASLVLYRKILDEIEANDYNNF 378
Query: 212 TKRAYVGRMKKYLMLPQAYNRT 233
TKRAYV + KK + LP AY ++
Sbjct: 379 TKRAYVSKSKKLIALPIAYAKS 400
>sp|P37273|PSY2_SOLLC Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum
lycopersicum GN=PSY2 PE=2 SV=1
Length = 310
Score = 316 bits (809), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 191/261 (73%), Gaps = 29/261 (11%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
+LMT +RR+AIWAI V LDRWE RL+DIF GRP+DMLDAA
Sbjct: 36 MLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWEARLEDIFNGRPFDMLDAA 95
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L+D V +FP+DI+ MRMD K RY N ELYLYCYYVAGTVGLMSVP+MGIAP
Sbjct: 96 LSDTVSRFPVDIQPFRDMVEGMRMDLWKSRYNNFDELYLYCYYVAGTVGLMSVPIMGIAP 155
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKV 152
+S ++ +S+YN AL LG+ NQLTN LRDVGEDA RGRVYLPQD+LAQ L D+D+FA KV
Sbjct: 156 ESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKV 215
Query: 153 TDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLT 212
TD WR FMK+QI+RAR FF+ AE+G ++L SRWPV +SLL+YR+ILD IE NDY+N T
Sbjct: 216 TDKWRIFMKKQIQRARKFFDEAEKGVTELSSASRWPVLASLLLYRKILDEIEANDYNNFT 275
Query: 213 KRAYVGRMKKYLMLPQAYNRT 233
+RAYV + KK L LP AY R+
Sbjct: 276 RRAYVSKPKKLLTLPIAYARS 296
>sp|Q9SSU8|PSY_DAUCA Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1
Length = 398
Score = 307 bits (787), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 152/260 (58%), Positives = 186/260 (71%), Gaps = 29/260 (11%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
LLMT ERR+A+WAI V LDRWE+RL D+F G+PYDM DAA
Sbjct: 130 LLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAA 189
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L D V +P+DI+ MRMD +K RY+ ELYLYCYYVAGTVGLMSVPVMGIAP
Sbjct: 190 LADTVSTYPVDIQPFKDMIDGMRMDLKKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAP 249
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKV 152
+S ++ +S+Y+ AL LG+ NQLTN LRDVGEDA RGR+YLPQ++L + + +F KV
Sbjct: 250 ESKATTESVYSAALALGIANQLTNILRDVGEDARRGRIYLPQEELKLAGITPEYIFKGKV 309
Query: 153 TDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLT 212
TD WR FMK QIKRAR FF+ AE+G ++L SRWPVW+SLL+Y++ILDAIE NDYDN T
Sbjct: 310 TDKWRSFMKGQIKRARMFFDEAEKGVAELSSASRWPVWASLLLYKQILDAIEANDYDNFT 369
Query: 213 KRAYVGRMKKYLMLPQAYNR 232
KRAYVG+ KK + LP AY+R
Sbjct: 370 KRAYVGKAKKLVSLPLAYSR 389
>sp|P37269|CRTB_SYNE7 Phytoene synthase OS=Synechococcus elongatus (strain PCC 7942)
GN=crtB PE=3 SV=2
Length = 308
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 159/267 (59%), Gaps = 35/267 (13%)
Query: 2 LLMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAA 40
LLM E +R+AIWAI V LD WE RL+ +F G P D D A
Sbjct: 39 LLMPEAKRQAIWAIYVWCRRTDELVDGPQAAQTNFATLDAWERRLERLFAGEPEDDCDVA 98
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L D + ++PLDI+ RMD + RY ++LY YCY VAGTVGLMS PVMGI
Sbjct: 99 LVDTLARYPLDIQPFRDMIEGQRMDLLQNRYSTFEDLYTYCYRVAGTVGLMSQPVMGIES 158
Query: 93 DSSSSAQSIY------NGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKD 146
+S + AL LG+ NQLTN LRDVGEDA RGR+YLPQ++LAQF ++D
Sbjct: 159 TNSRAPWDPTTPPDPTQEALALGIANQLTNILRDVGEDARRGRIYLPQEELAQFNYSEQD 218
Query: 147 VFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEN 206
+F + D WR FM+ Q+ RAR +F AE G QL D+RWPVW+SL++YREILD IE+N
Sbjct: 219 LFNGVIDDRWRAFMQFQLDRARDYFEQAERGIRQLSHDARWPVWASLMLYREILDVIEQN 278
Query: 207 DYDNLTKRAYVGRMKKYLMLPQAYNRT 233
+YD KRAYV +K LP A R
Sbjct: 279 NYDVFRKRAYVPTWRKLCSLPVAMLRA 305
>sp|O07333|CRTY_SPIPL Phytoene synthase OS=Spirulina platensis GN=crtB PE=3 SV=1
Length = 309
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 162/268 (60%), Gaps = 36/268 (13%)
Query: 3 LMTEERRKAIWAICV---------------------LDRWEERLQDIFYGRPYDMLDAAL 41
LM +R+AIWAI V LD WEE+L+ IF G P + +D AL
Sbjct: 40 LMPLAKRQAIWAIYVWCRRTDELVDGPMASSTTLETLDHWEEQLESIFAGHPIEPVDVAL 99
Query: 42 TDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIA-P 92
D + +FPLDI+ RMD + RY EL LYCY VAGTVGLMS+ VMG A P
Sbjct: 100 VDTLGRFPLDIQPFRDMIAGQRMDLSRNRYNTFDELNLYCYRVAGTVGLMSLAVMGTAEP 159
Query: 93 DSS---SSAQSIY---NGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKD 146
D S + QSIY A+ LG+ NQLTN LRDVGEDA RGR+YLP D LA F + D
Sbjct: 160 DLSVPWNRDQSIYYPKEEAIALGIANQLTNILRDVGEDARRGRIYLPLDDLALFNYTEAD 219
Query: 147 VFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEN 206
+ KV + WRE M+ QI+RAR F+ +AEEG + L D RWPVW++L++YR+ILD IE N
Sbjct: 220 LLNGKVDERWRELMRFQIQRARKFYTLAEEGIAALHPDIRWPVWTALMLYRQILDEIERN 279
Query: 207 DYDNLTKRAYVGRMKKYLMLPQAYNRTQ 234
+YD +RAYV KK + LP A R +
Sbjct: 280 EYDVFNQRAYVPTWKKMMCLPLAQLRAR 307
>sp|P37294|CRTB_SYNY3 Phytoene synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=crtB PE=3 SV=1
Length = 337
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 153/268 (57%), Gaps = 35/268 (13%)
Query: 2 LLMTEERRKAIWAI---C------------------VLDRWEERLQDIFYGRPYDMLDAA 40
LLM +R+AIWAI C LD WE RL+ IF G+P D D A
Sbjct: 68 LLMPPAKRRAIWAIYLWCRRTDELVDGPQAATTTPETLDHWERRLEGIFAGQPQDDADVA 127
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGI-- 90
L D + FPLDI+ RMD + RY+ +EL LYCY VAGTVGLMS V+G+
Sbjct: 128 LVDTLETFPLDIQPFRDMIAGQRMDLYRSRYQTFEELDLYCYRVAGTVGLMSSAVLGVDT 187
Query: 91 ----APDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKD 146
AP + A+ LGV NQLTN LRDVGED RGR+YLP + L +F ++D
Sbjct: 188 GNGQAPWQPDAVYIPQEEAIALGVANQLTNILRDVGEDVERGRIYLPLEDLERFNYSEQD 247
Query: 147 VFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEN 206
+ D WR MK +I RAR +F AE G L++D+RWPVW++L++Y+ ILD IE N
Sbjct: 248 LLNGVNDDRWRSLMKFEIDRARHYFEDAERGIRALNRDARWPVWTALMLYKGILDVIEAN 307
Query: 207 DYDNLTKRAYVGRMKKYLMLPQAYNRTQ 234
+Y+ +RAYV KK L LP A+ R Q
Sbjct: 308 NYNVFNRRAYVPTPKKLLYLPVAWLRAQ 335
>sp|P37270|CRTB_THET2 Phytoene synthase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=crtB PE=3 SV=1
Length = 289
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 34/256 (13%)
Query: 1 ALLMTEERRKAIWAI---C---------------VLDRWEERLQDIFYGRPYDMLDAALT 42
+LL +E RK WA+ C L+ W ++ + GRP + L
Sbjct: 29 SLLFPKEARKGAWAVYAACRLGDEAVDGEGGGPEALEAWWAGVERAYRGRPLAEWEKGLA 88
Query: 43 DAV--FKFPLDIKMRM------DTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDS 94
A+ + P + + M D R EL YCY VAGTVG M P+ G ++
Sbjct: 89 WALERWDIPFEAFLHMREGFLTDLGPVRLGTEAELLRYCYQVAGTVGRMMAPIAGGGKEA 148
Query: 95 SSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTD 154
+ A + LG QLTN LRDVGED R RVYLP D L + +D+ A +VT
Sbjct: 149 EARA-------VKLGQAMQLTNILRDVGEDLERDRVYLPLDLLRAHGVEVEDLRAGRVTP 201
Query: 155 NWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKR 214
+R M +AR + G L K R + + L YR ILD + + YDNL +R
Sbjct: 202 GYRALMAHLEGKARALYREGLAGLGHL-KVGRAAIALAALQYRGILDKLRLSGYDNLGRR 260
Query: 215 AYVGRMKKYLMLPQAY 230
A++ ++ L+LP+A+
Sbjct: 261 AHLKAWERALLLPKAF 276
>sp|Q4L976|CRTM_STAHJ Dehydrosqualene synthase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtM PE=3 SV=1
Length = 285
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 37/252 (14%)
Query: 3 LMTEERRKAIWAI---C-VLDRWEERLQDIFYGRPY------------------DMLDAA 40
++ E++R+AIWAI C ++D + QD+ Y D + A
Sbjct: 28 MLPEQQRRAIWAIYAVCRIVDDSIDVHQDVEYLHKINRDVKAIEHQTTTTFESDDRIMTA 87
Query: 41 LTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
DA F ++ + + D +E + L YCY VAGTVG++ +P++ P
Sbjct: 88 FADAATHFQMNFQALYDLIDTVEADQHFEMFETDRGLLDYCYGVAGTVGVLLIPILATPP 147
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFAR-K 151
+ Y LG QLTN LRDVGED GR+Y + +L +F + D R +
Sbjct: 148 SDEA-----YEYGKQLGEALQLTNILRDVGEDYRNGRIYFSKARLNEFNVSIADEIERDQ 202
Query: 152 VTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNL 211
++DN+ + + A ++M +++SR + + +YR IL + + DY +L
Sbjct: 203 LSDNYIKIWEFYATLADNNYDMVLNHLDVYNEESRMIIELAAQVYRGILTEVRKADY-SL 261
Query: 212 TKRAYVGRMKKY 223
RAYV + KK+
Sbjct: 262 KDRAYVSKWKKH 273
>sp|P54977|CRTB_STRGR Phytoene synthase OS=Streptomyces griseus GN=crtB PE=3 SV=1
Length = 342
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 40 ALTDAVFKFPLDIK--------MRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIA 91
AL D ++ +D + MR D Y + +EL Y + A +GL +PV+G
Sbjct: 102 ALADTAARYTIDHRHFTDFLSSMRSDLTVGGYASYEELGRYMHGSAAVIGLQMLPVLGTV 161
Query: 92 PDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFA-- 149
+A A LGV QLTNFLRDVGED RGR+YLP + LA D+D F
Sbjct: 162 VAREEAAPH----AAALGVAFQLTNFLRDVGEDLDRGRLYLPTELLAAHG-ADRDRFEWS 216
Query: 150 -------RKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDA 202
++TD R R + A G + L SR + ++ ++Y ILDA
Sbjct: 217 RSTGMPDSRITDVLRAAAAHN----RAVYRAALPGIAMLAPVSRPCIRTAFVLYSGILDA 272
Query: 203 IEENDYDNL 211
IE + Y L
Sbjct: 273 IEADGYAVL 281
>sp|P54905|CRTB_RHOS4 Phytoene synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=crtB PE=3 SV=2
Length = 355
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 24/240 (10%)
Query: 5 TEERRKAIWAICVLDRWEERLQDIFYGRPYDM-LDAALTDAV--FKFPLDIKMRM----- 56
E +R+A+ ++ +RL ++ GRP + D A V F+ P + +
Sbjct: 63 AEVKRRAVLSL------RDRLDLVYGGRPRNAPADRAFAAVVEEFEMPRALPEALLEGLA 116
Query: 57 -DTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIA-PDSSSSAQSIYNGALNLGVGNQL 114
D Y++ + Y VA VG M +M + PD + A +LG+ QL
Sbjct: 117 WDAVGRSYDSFSGVLDYSARVAAAVGAMMCVLMRVRDPD-------VLARACDLGLAMQL 169
Query: 115 TNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDN-WREFMKEQIKRARTFFNM 173
TN RDVG DA GR+YLP+D + + L ++ AR V D+ R ++ A +
Sbjct: 170 TNIARDVGTDARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRLLRAADRLYLR 229
Query: 174 AEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKYLMLPQAYNRT 233
+E G L R ++++ IY I D I N YD++T+RA+ R +K + L + R
Sbjct: 230 SEAGVCGLPLACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQKLVWLGLSATRA 289
>sp|P21683|CRTB_PANAN Phytoene synthase OS=Pantoea ananas GN=crtB PE=3 SV=2
Length = 309
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 56 MDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLT 115
MD R+ +Y L + YCY+VAG VGLM +MG+ +++ + A +LG+ QLT
Sbjct: 118 MDVREAQYSQLDDTLRYCYHVAGVVGLMMAQIMGVRDNAT------LDRACDLGLAFQLT 171
Query: 116 NFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAE 175
N RD+ +DA GR YLP L L ++ A + + ++ A ++ A
Sbjct: 172 NIARDIVDDAHAGRCYLPASWLEHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSAT 231
Query: 176 EGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKYLML 226
G + L S W + ++ +YR+I +E+ +R +K +L
Sbjct: 232 AGLAGLPLRSAWAIATAKQVYRKIGVKVEQAGQQAWDQRQSTTTPEKLTLL 282
>sp|P22872|CRTB_ESCVU Phytoene synthase OS=Escherichia vulneris GN=crtB PE=3 SV=1
Length = 309
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 56 MDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLT 115
MD + RY ++ YCY+VAG VGLM VMG+ + + + A +LG+ QLT
Sbjct: 118 MDVAQTRYVTFEDTLRYCYHVAGVVGLMMARVMGV------RDERVLDRACDLGLAFQLT 171
Query: 116 NFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAE 175
N RD+ +DA+ R YLP + L L ++ AR+ + I A ++ ++
Sbjct: 172 NIARDIIDDAAIDRCYLPAEWLQDAGLTPENYAARENRAALARVAERLIDAAEPYYISSQ 231
Query: 176 EGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKYLMLPQAYNRT-Q 234
G L W + ++ +YREI ++ +R + + +K ML A + +
Sbjct: 232 AGLHDLPPRCAWAIATARSVYREIGIKVKAAGGSAWDRRQHTSKGEKIAMLMAAPGQVIR 291
Query: 235 SKGSLIFP 242
+K + + P
Sbjct: 292 AKTTRVTP 299
>sp|P17056|CRTB_RHOCB Phytoene synthase OS=Rhodobacter capsulatus (strain ATCC BAA-309 /
NBRC 16581 / SB1003) GN=crtB PE=3 SV=1
Length = 339
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 23 ERLQDIFYGRPYDML-DAALTDAV--FKFPLDIKMRM------DTRKFRYENLQELYLYC 73
+RL+DI+ GRP + D A V F+ P ++ + D Y L ++ Y
Sbjct: 68 DRLEDIYAGRPRNAPSDRAFAAVVEEFEMPRELPEALLEGFAWDAEGRWYHTLSDVQAYS 127
Query: 74 YYVAGTVGLMSVPVMGI-APDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYL 132
VA VG M +M + PD+ + A +LG+ Q++N RDVGEDA GR++L
Sbjct: 128 ARVAAAVGAMMCVLMRVRNPDALARA-------CDLGLAMQMSNIARDVGEDARAGRLFL 180
Query: 133 PQDKLAQFVLCDKDVFA-RKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWS 191
P D + + + + A + T R + + RA + A G L D R + +
Sbjct: 181 PTDWMVEEGIDPQAFLADPQPTKGIRRVTERLLNRADRLYWRAATGVRLLPFDCRPGIMA 240
Query: 192 SLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+ IY I + + YDN+T+RA+ + +K
Sbjct: 241 AGKIYAAIGAEVAKAKYDNITRRAHTTKGRK 271
>sp|Q7A3E1|CRTM_STAAN Dehydrosqualene synthase OS=Staphylococcus aureus (strain N315)
GN=crtM PE=3 SV=1
Length = 287
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED RVY + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q99R75|CRTM_STAAM Dehydrosqualene synthase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtM PE=1 SV=1
Length = 287
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED RVY + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERVYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q8NUQ5|CRTM_STAAW Dehydrosqualene synthase OS=Staphylococcus aureus (strain MW2)
GN=crtM PE=3 SV=1
Length = 287
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q6G6B2|CRTM_STAAS Dehydrosqualene synthase OS=Staphylococcus aureus (strain MSSA476)
GN=crtM PE=3 SV=1
Length = 287
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|O07854|CRTM_STAAE Dehydrosqualene synthase OS=Staphylococcus aureus (strain Newman)
GN=crtM PE=3 SV=3
Length = 287
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q5HCY8|CRTM_STAAC Dehydrosqualene synthase OS=Staphylococcus aureus (strain COL)
GN=crtM PE=3 SV=1
Length = 287
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q2FV59|CRTM_STAA8 Dehydrosqualene synthase OS=Staphylococcus aureus (strain NCTC
8325) GN=crtM PE=1 SV=1
Length = 287
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|Q2FDU5|CRTM_STAA3 Dehydrosqualene synthase OS=Staphylococcus aureus (strain USA300)
GN=crtM PE=3 SV=1
Length = 287
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFDNERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFQDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVDKRKK 273
>sp|A9JQL9|CRTM_STAAU Dehydrosqualene synthase OS=Staphylococcus aureus GN=crtM PE=1 SV=1
Length = 287
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + +Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQANY-TLHERVFVEKRKK 273
>sp|Q2YWE7|CRTM_STAAB Dehydrosqualene synthase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtM PE=3 SV=1
Length = 287
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
+E EL+ YCY VAGTVG + P++ S Y+ A LG QL N LRDVG
Sbjct: 120 FETDAELFGYCYGVAGTVGEVLTPIL-----SDHETHQTYDVARRLGESLQLINILRDVG 174
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 182
ED R+Y + +L Q+ + +V+ V +++ + + A F +
Sbjct: 175 EDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS 234
Query: 183 KDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKK 222
+++ + + IY EILD + + Y L +R +V + KK
Sbjct: 235 IEAQPIIELAARIYIEILDEVRQASY-TLHERVFVYKRKK 273
>sp|P54975|CRTB_PARSN Phytoene synthase OS=Paracoccus sp. (strain N81106 / MBIC 01143)
GN=crtB PE=3 SV=2
Length = 304
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 48 FPLDI--KMRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGA 105
+P+D+ MD Y L ++ Y Y+VAG VG+M VMG+ D + + A
Sbjct: 104 WPMDLIEGFAMDVEARDYRTLDDVLEYSYHVAGIVGVMMARVMGVRDDP------VLDRA 157
Query: 106 LNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIK 165
+LG+ QLTN RDV +DA GR YLP D L Q V + + +
Sbjct: 158 CDLGLAFQLTNIARDVIDDARIGRCYLPGDWLDQ---AGARVDGPVPSPELYTVILRLLD 214
Query: 166 RARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKYLM 225
A ++ A G + L W + ++L IYR I I + + +R + K +
Sbjct: 215 AAELYYASARVGLADLPPRCAWSIAAALRIYRAIGLRIRKGGPEAYRQRISTSKAAKIGL 274
Query: 226 L 226
L
Sbjct: 275 L 275
>sp|E4UPP6|LCPS_ARTGP Bifunctional lycopene cyclase/phytoene synthase OS=Arthroderma
gypseum (strain ATCC MYA-4604 / CBS 118893)
GN=MGYG_02096 PE=3 SV=1
Length = 594
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 48 FPLDIKMRMDTRKFRYENLQELYLYCYYVAGTVG-LMSVPVMGIAPDSSSSAQS--IYNG 104
F +D+K + F +L +Y Y+VAGTV L+ V P S S A+ + +
Sbjct: 408 FEIDLKFDFEKGSFPIATEHDLEVYAYHVAGTVASLLLELVFRHHPVSISEAERLRVISA 467
Query: 105 ALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQI 164
+G Q TN RD+ DA GRVY+P LA+ L V + + +
Sbjct: 468 GEVMGRALQYTNIARDITRDAEIGRVYIPSSWLAEEGLTPSMVISHPRNSKLIPLRRRIL 527
Query: 165 KRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKY 223
++A + +E S+L + + PV +++ Y EI I EN+ + V R +++
Sbjct: 528 EKADKCYCETQEAISKLPSNVQGPVRATVTAYMEIGQVIRENETKIWNGKLKVSRWRRF 586
>sp|D4D802|LCPS_TRIVH Bifunctional lycopene cyclase/phytoene synthase OS=Trichophyton
verrucosum (strain HKI 0517) GN=TRV_03236 PE=3 SV=1
Length = 595
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 39 AALTDAVFKFPLDIKMRMDTRKFRYENLQELYLYCYYVAGTVG-LMSVPVMGIAPDSSSS 97
L+D + F +D+K + F +L +Y Y+VAGT+ L+ V P S S
Sbjct: 400 GPLSDLLKGFEIDMKFDSERGIFPIATEHDLEVYAYHVAGTIATLLLELVFRHHPVSISD 459
Query: 98 AQS--IYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDN 155
++ + + +G Q TN RD+ DA GRVY+P LA+ L V +
Sbjct: 460 SERLRVISAGEGMGRALQYTNIARDIVRDAEIGRVYIPSVWLAEQGLTPSMVVNQPRNPK 519
Query: 156 WREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRA 215
+ + +A + +E S+L + R PV +++ +Y +I I EN+ +
Sbjct: 520 LIPLRRRLLDKAEKCYRDTQEAISELPANVRAPVRATVTVYMDIGQVIRENEMKVWNGKL 579
Query: 216 YVGRMKKY 223
V R +++
Sbjct: 580 KVSRWRRF 587
>sp|P65860|CRTB_MYCTU Probable phytoene synthase OS=Mycobacterium tuberculosis GN=crtB
PE=3 SV=1
Length = 302
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 39/165 (23%)
Query: 3 LMTEERRKAIWAICVLDRWEERLQDIFYG---------------RPYDMLD-------AA 40
L+ E+R A+ A+ L R R+ D+ G + D +D A
Sbjct: 28 LLPREKRAALSAVYALGR---RIDDVADGELAPETKITELDAIRKSLDNIDDSSDPVLVA 84
Query: 41 LTDAVFKFPLDIKM--------RMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L DA +FP+ I M RM+ + EL +YC AGT+G + + + G
Sbjct: 85 LADAARRFPVPIAMFAELIDGARMEIDWTGCRDFDELIVYCRRGAGTIGKLCLSIFG--- 141
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKL 137
S+A S Y A LG+ Q TN LRDV ED GR+YLP+D+L
Sbjct: 142 -PVSTATSRY--AEQLGIALQQTNILRDVREDFLNGRIYLPRDEL 183
>sp|P65861|CRTB_MYCBO Probable phytoene synthase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=crtB PE=3 SV=1
Length = 302
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 39/165 (23%)
Query: 3 LMTEERRKAIWAICVLDRWEERLQDIFYG---------------RPYDMLD-------AA 40
L+ E+R A+ A+ L R R+ D+ G + D +D A
Sbjct: 28 LLPREKRAALSAVYALGR---RIDDVADGELAPETKITELDAIRKSLDNIDDSSDPVLVA 84
Query: 41 LTDAVFKFPLDIKM--------RMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAP 92
L DA +FP+ I M RM+ + EL +YC AGT+G + + + G
Sbjct: 85 LADAARRFPVPIAMFAELIDGARMEIDWTGCRDFDELIVYCRRGAGTIGKLCLSIFG--- 141
Query: 93 DSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKL 137
S+A S Y A LG+ Q TN LRDV ED GR+YLP+D+L
Sbjct: 142 -PVSTATSRY--AEQLGIALQQTNILRDVREDFLNGRIYLPRDEL 183
>sp|P55350|Y4AC_RHISN Putative phytoene synthase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00440 PE=3 SV=1
Length = 279
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 54 MRMDT-RKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGN 112
M MD + R + L LYC VA VG MSV V G++ + + A +LG
Sbjct: 105 MEMDVLQDIRAPKMATLDLYCDRVASAVGRMSVRVFGLSEEDGIAL------AHHLGRAL 158
Query: 113 QLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFN 172
QLTN LRD+ EDA GR+Y+P++ L + D + +RA F
Sbjct: 159 QLTNILRDIDEDAGLGRLYIPRESLDHAGITSSDPHKVIADKALPKACAPLAQRAMMHFA 218
Query: 173 MAEEGASQLDKDSRWPVWSSLLI---YREILDAI---------EENDYDNLTKRAYVGR 219
++E ++ + R V + ++ YR ILD + E NLTKRA + R
Sbjct: 219 ESDE---IMNCNPRRIVRAPTIMSKCYRAILDLLLIRGFAAPREPVRVTNLTKRAILFR 274
>sp|E4ZUB5|LCPS_LEPMJ Bifunctional lycopene cyclase/phytoene synthase OS=Leptosphaeria
maculans (strain JN3 / isolate v23.1.3 / race
Av1-4-5-6-7-8) GN=Lema_P114090.1 PE=3 SV=1
Length = 581
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 64 ENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQS---IYNGALNLGVGNQLTNFLRD 120
++ ++L LY VAGTV M + ++ SS +A+ + ++GV Q N RD
Sbjct: 411 QSTEDLVLYSERVAGTVAQMCIQLIFHLYPSSLTAEKRHKVVAAGNSMGVALQYVNIARD 470
Query: 121 VGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQ-IKRARTFFNMAEEGAS 179
+G DA GRVYLP D L++ L + D + D E ++ + + A +F+ A+ +
Sbjct: 471 IGVDAKIGRVYLPTDWLSEVGL-NCDTVLKDPKDPRIEALRGRLLDDAFSFYEEAKLAIA 529
Query: 180 QLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKYLM 225
QL +++ P+ ++ Y EI ++++ + RA V + ++ L+
Sbjct: 530 QLPIEAQGPIRVAVESYMEIGRTLKQDGFIVKAGRATVPKWRRVLV 575
>sp|Q0V6M5|LCPS_PHANO Bifunctional lycopene cyclase/phytoene synthase OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=SNOG_00339 PE=3 SV=1
Length = 585
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 23 ERLQDIFYGRPYDMLDAALTDAVFKFPLDIKMRMDTRKFRYENLQELYLYCYYVAGTVGL 82
+ LQD+ +G ++M D F IK D R LY VAGTV
Sbjct: 389 QPLQDLLHG--FEM------DLAFNTSSPIKTETDLR-----------LYSERVAGTVAQ 429
Query: 83 MSVP-VMGIAPDSSSSAQS--IYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQ 139
M + + + P + +S + + + +G+ Q N RD+ DA GRVYLP D L +
Sbjct: 430 MCIELIFRLYPSNMTSGEERKVVDAGNQMGMALQYVNIARDISVDAHIGRVYLPLDWLQE 489
Query: 140 FVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREI 199
L +V +++A + ++ A L ++R P+ ++ Y EI
Sbjct: 490 SGLTYDEVLISPEGARMESLRMRLLEKAFSIYDGARGAIETLPVEARGPIRVAVESYMEI 549
Query: 200 LDAIEENDYDNLTKRAYVGRMKKYLMLPQAYNRT 233
+ + Y RA V + ++ ++ + N++
Sbjct: 550 GRTLRQKGYTVRAGRATVSKWRRVIVAWRTLNKS 583
>sp|Q8X0Z1|LCPS_GIBFU Bifunctional lycopene cyclase/phytoene synthase OS=Gibberella
fujikuroi GN=carRA PE=2 SV=1
Length = 612
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 3/202 (1%)
Query: 34 YDMLDAALTDAVFKFPLDIKMRMDTRKFRYENLQELYLYCYYVAGTVG-LMSVPVMGIAP 92
Y + L D + F D+ + F E ++L +Y VAGTV L + ++ P
Sbjct: 411 YYLPKQPLDDLLKGFDTDLLFDRKSGAFPIETTEDLDIYGSRVAGTVAELCNHLILYHTP 470
Query: 93 DSSSS--AQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFAR 150
++ + + +G+ Q N RD+ DA RVYLP L + L +DV +
Sbjct: 471 EAVPEDIQREVVASGQEMGIALQYVNIARDIKTDAEIDRVYLPLSWLKEAQLTPEDVIQQ 530
Query: 151 KVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDN 210
+ + RA +NMA+ +L + + P+ ++ Y EI + E
Sbjct: 531 PHGPTIEALRHKLLDRAFEKYNMAKGAIDKLPSEGKGPIRVAVESYMEIGRVLREKGPTM 590
Query: 211 LTKRAYVGRMKKYLMLPQAYNR 232
RA V +M++ + A N+
Sbjct: 591 KKGRATVPKMRRIRVAWSALNK 612
>sp|O06728|YISP_BACSU Putative phytoene/squalene synthase YisP OS=Bacillus subtilis
(strain 168) GN=yisP PE=3 SV=2
Length = 267
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 63 YENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVG 122
Y++L EL +Y Y G GLM +P++ + + A++LG+ QL FL D+G
Sbjct: 108 YDDLDELLMYAYRTGGAAGLMLLPIL-----TRRKQDQLKQAAVSLGLAIQLVRFLSDLG 162
Query: 123 EDASRGRVYLPQDKLAQFVLCDKDV----FARKVTDNWREFMKEQIKRARTFFNMAEEGA 178
D + R+ P+ + QF + D+ + T W E A + ++
Sbjct: 163 TDQQKNRI--PRQVMQQFGYTEADLQKGTVNKAFTMTWEYIAFE----AEAYLEECQDAL 216
Query: 179 SQLDKDSRWPVWSSLLIYREILDAIEENDYD 209
+ S+ V ++L ++R +L+ I +D
Sbjct: 217 PLFPQYSQKTVKAALHLHRAVLEKIRAKQHD 247
>sp|B2WAQ3|LCPS_PYRTR Bifunctional lycopene cyclase/phytoene synthase OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_07366 PE=3
SV=1
Length = 583
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 65 NLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQS---IYNGALNLGVGNQLTNFLRDV 121
+++L +Y VAGTV M + ++ S+ + I ++GV Q N RD+
Sbjct: 412 TMEDLRVYSERVAGTVAQMCIQLIFYWYPSTLDTEEKNVIVAAGNSMGVALQYVNIARDI 471
Query: 122 GEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQL 181
DA GRVYLP + L++ L DV + + K + A + + A++ +L
Sbjct: 472 EVDAQIGRVYLPLNWLSEAGLSYDDVLKKPNQAQIQTLRKHLLNHAFSVYEKAKDSIERL 531
Query: 182 DKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKYLM 225
++R P+ ++ Y EI + Y RA V + ++ ++
Sbjct: 532 PIEARGPIRVAVESYMEIGRILRSEQYQVKAGRATVPKSRRIMV 575
>sp|D1Z4K7|LCPS_SORMK Bifunctional lycopene cyclase/phytoene synthase OS=Sordaria
macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) /
K-hell) GN=putative al2 PE=3 SV=1
Length = 602
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 60 KFRYENLQELYLYCYYVAGTVGLMSVPVM--GIAPD-SSSSAQSIYNGALNLGVGNQLTN 116
KF + ++L Y VAGTVG + + ++ PD S S + + + A +G+ Q N
Sbjct: 421 KFPIAHDKDLKTYAIRVAGTVGELCIALIIHHCLPDMSDSQKRRLESAACRMGIALQYVN 480
Query: 117 FLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQ-IKRARTFFNMAE 175
RD+ DA GRVYLP L + L K V E M+ + + A + A
Sbjct: 481 IARDILVDAQIGRVYLPTSWLKEEGLTHKAVLDNPEGPEVIEKMRRRLLDNAFELYREAR 540
Query: 176 EGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKR 214
Q+ ++R P+ ++ Y EI + E + R
Sbjct: 541 PEMQQIPSEARGPMIGAVENYMEIGRVLREKKVGQVFVR 579
>sp|P55351|Y4AD_RHISN Uncharacterized protein y4aD OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00430 PE=3 SV=1
Length = 292
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 55 RMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQL 114
RMD K RYEN E+ YC Y A VG + V G + + + + L G Q+
Sbjct: 103 RMDVTKQRYENWDEVIDYCRYSAMPVGRFVLDVHG-------ESAATWPASDVLCAGLQV 155
Query: 115 TNFLRDVGED-ASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIKRARTFFNM 173
N L+D G+D + RVY+P+D L+ +++ A K + + ++ +A N
Sbjct: 156 CNHLQDCGKDFLNLNRVYIPRDALSASGASIEELGAAKSSLQMLQCLRSLAAKAEVLLNG 215
Query: 174 AEEGASQLDKDSR 186
SQ+ KD R
Sbjct: 216 GGALVSQV-KDFR 227
>sp|B2ATB0|LCPS_PODAN Bifunctional lycopene cyclase/phytoene synthase OS=Podospora
anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC
10383) PE=3 SV=1
Length = 593
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 34 YDMLDAALTDAVFKFPLDIKMRMDTRKFRYENLQELYLYCYYVAGTVGLMSVPVM--GIA 91
Y +++ D+ F F ++ K+ + +L Y VAGTVG + V ++
Sbjct: 393 YQLIEGFELDSQFSF----HDSSESAKYPIVDEDKLNYYGQCVAGTVGELCVALIIEHCE 448
Query: 92 PD-SSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFAR 150
P+ + + + + +GV Q N RD+ DA GRVYLP L + L +DV A
Sbjct: 449 PEMPDERKKMLMSVSRTMGVALQYVNIARDIVVDAEMGRVYLPTTWLKEEGLTPEDVVAH 508
Query: 151 KVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEE 205
+ + + A ++ A + + K++R P+ ++ Y EI + E
Sbjct: 509 PRGKHVENLRRRLLSEAFKLYDEARPKMNGIPKEARGPMIGAVETYMEIGRVLRE 563
>sp|P37295|LCPS_NEUCR Bifunctional lycopene cyclase/phytoene synthase OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=al-2 PE=1 SV=1
Length = 602
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 34 YDMLDAALTDAVFKFPLDIKMRMDTRKFRYE--NLQELYLYCYYVAGTVGLMSVPVM--G 89
YD++ D+ F F D+ +Y + ++L Y YVAGTVG + + ++
Sbjct: 397 YDLIKGFEMDSQFTF----HGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCIALIIYH 452
Query: 90 IAPD-SSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVF 148
PD S + + + A +G+ Q N RD+ DA GRVYLP L + L K V
Sbjct: 453 CLPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGLTHKMVL 512
Query: 149 ARKVTDNWREFMKEQ-IKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEE 205
E M+ + ++ A + A ++ ++R P+ ++ Y I + E
Sbjct: 513 ENPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGRVLRE 570
>sp|E3Q717|LCPS_COLGM Bifunctional lycopene cyclase/phytoene synthase OS=Colletotrichum
graminicola (strain M1.001 / M2 / FGSC 10212)
GN=GLRG_02475 PE=3 SV=1
Length = 587
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 51 DIKMRMDTRKFRYENLQELYLYCYYVAGTVG-----LMSVPVMGIAPDSSSSAQSIYNGA 105
++ + F + ++L LY VA TVG L+ PD + + N A
Sbjct: 399 EMDLSFSNSAFPIADPEDLELYAARVASTVGQACLELVFCHCQHGLPDYMKA--YLRNTA 456
Query: 106 LNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMKEQIK 165
+G+ Q N RD+ DA GRVYLP L + L +DV ++ + + +
Sbjct: 457 RQMGLALQFVNISRDIAVDAKIGRVYLPTTWLKEEGLTPEDVLKSPNSEGVGKVRRRILA 516
Query: 166 RARTFFNMAEEGASQLDKDSRWPVWSSLLIYREI 199
+A + A + + ++R P+ ++ Y EI
Sbjct: 517 KALDHYGEARDSMKWIPSEARGPMIVAVESYMEI 550
>sp|Q7Z859|LCPS_PHARH Bifunctional lycopene cyclase/phytoene synthase OS=Phaffia
rhodozyma GN=crtYB PE=2 SV=1
Length = 673
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 20 RWEERLQDIFYGRPYD-MLDAALTDAVFKFPLDIKMRMDTRKFRYENLQELYLYCYYVAG 78
R +LQ + P D +L TD +F PL + + RK E +L Y VAG
Sbjct: 425 RLLAKLQGLIPRYPLDELLRGYTTDLIF--PLSTEA-VQARKTPIETTADLLDYGLCVAG 481
Query: 79 TVGLMSVPVMGIAPDSSSSA-----QSIYNGALNLGVGNQLTNFLRDVGEDASRGRVYLP 133
+V + V V + S A +++ + +G QL N RD+ DA+ GR YLP
Sbjct: 482 SVAELLVYVSWASAPSQVPATIEEREAVLVASREMGTALQLVNIARDIKGDATEGRFYLP 541
Query: 134 QDKLAQFVLCDKDVFARKVTDNWRE 158
L+ F L D+ A + +W E
Sbjct: 542 ---LSFFGLRDESKLA--IPTDWTE 561
>sp|Q54DR1|FDFT_DICDI Squalene synthase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1
Length = 416
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 66 LQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDA 125
L E LYC+YVAG VG+ + + S + + + +G+ Q TN +RD ED
Sbjct: 165 LPEWDLYCHYVAGLVGIGLSKIFHASGLESEWFATADDESNQMGLFLQKTNIIRDYLEDI 224
Query: 126 SRGRVYLPQDKLAQFVL 142
+ R++ P+D A++ L
Sbjct: 225 NEKRIFWPRDVWARYTL 241
>sp|Q9UUQ6|LCPS_MUCCL Bifunctional lycopene cyclase/phytoene synthase OS=Mucor
circinelloides f. lusitanicus GN=CARRP PE=2 SV=1
Length = 614
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 8/172 (4%)
Query: 67 QELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQS---IYNGALNLGVGNQLTNFLRDVGE 123
++L Y VA +VG M ++ D +S Q I A +G+ Q TN RD+
Sbjct: 419 EDLRYYSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVLQYTNIARDIVT 478
Query: 124 DASR-GRVYLPQDKLAQF-VLCDKDVFARKVTDN-WREFMKEQIKRARTFFNMAEEGASQ 180
D+ GR YLPQD L + V + AR++ + I +A +A +G +
Sbjct: 479 DSEELGRCYLPQDWLTEKEVALIQGGLAREIGEERLLSLSHRLIYQADELMVVANKGIDK 538
Query: 181 LDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKY-LMLPQAYN 231
L + V ++ +Y I ++ + + RA+VG K+ + L YN
Sbjct: 539 LPSHCQGGVRAACNVYASIGTKLKSYKH-HYPSRAHVGNSKRVEIALLSVYN 589
>sp|P29704|FDFT_YEAST Squalene synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ERG9 PE=1 SV=2
Length = 444
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 71 LYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRGRV 130
+YC+YVAG VG ++ IA ++ S S ++G+ Q TN +RD ED GR
Sbjct: 177 VYCHYVAGLVGDGLTRLIVIAKFANESLYSNEQLYESMGLFLQKTNIIRDYNEDLVDGRS 236
Query: 131 YLPQDKLAQF 140
+ P++ +Q+
Sbjct: 237 FWPKEIWSQY 246
>sp|Q2U4X9|LCPS_ASPOR Bifunctional lycopene cyclase/phytoene synthase OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090020000159
PE=3 SV=1
Length = 587
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 48 FPLDIKMRMDTRKFRYENLQELYLYCYYVAGTVGL-MSVPVMGIAPDSSSSA-----QSI 101
F D+ F + +L Y Y+VA +V M V+ PD + + +
Sbjct: 394 FRTDLTFSAKPGSFPFVTESDLDTYAYHVASSVAASMLGLVVHHFPDHQFAINVFLRRRV 453
Query: 102 YNGALNLGVGNQLTNFLRDVGEDASRGRVYLPQDKLAQFVLCDKDVFARKVTDNWREFMK 161
+ +G Q N RD+ DA+ RVYLP L Q L +DV A TD+ E ++
Sbjct: 454 VDAGERMGQTLQYINVARDIARDAAINRVYLPTTWLKQQGLGPEDVLASP-TDSRLELVR 512
Query: 162 EQ-IKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAI 203
++ + RA A E L + + P +++ Y EI A+
Sbjct: 513 DRLLDRAEFLSASAREEMKFLPDEVQGPFLATVDSYLEIGAAL 555
>sp|Q9HGZ6|FDFT_CANGA Squalene synthase OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG9 PE=3 SV=2
Length = 443
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 72 YCYYVAGTVG--LMSVPVM-GIAPDSSSSAQSIYNGALNLGVGNQLTNFLRDVGEDASRG 128
YC+YVAG VG L + V+ G D ++ + ++G+ Q TN +RD ED G
Sbjct: 178 YCHYVAGLVGDGLTELIVLAGFGSDDLYHGKNSFQLYESMGLFLQKTNIIRDYAEDLDDG 237
Query: 129 RVYLPQDKLAQFVLCDKDVFARKVTD 154
R + P++ ++ +A K+TD
Sbjct: 238 RSFWPKEIWSE--------YATKLTD 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,312,185
Number of Sequences: 539616
Number of extensions: 3450749
Number of successful extensions: 7600
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 7401
Number of HSP's gapped (non-prelim): 155
length of query: 243
length of database: 191,569,459
effective HSP length: 114
effective length of query: 129
effective length of database: 130,053,235
effective search space: 16776867315
effective search space used: 16776867315
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)