Query 036987
Match_columns 478
No_of_seqs 231 out of 2134
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 07:27:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036987.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036987hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 4.8E-83 1E-87 666.6 33.0 443 22-478 3-687 (972)
2 PRK10517 magnesium-transportin 100.0 4.2E-80 9.1E-85 689.8 46.5 438 22-478 48-647 (902)
3 COG0474 MgtA Cation transport 100.0 1.4E-81 3E-86 703.6 34.7 455 16-478 16-648 (917)
4 TIGR01647 ATPase-IIIA_H plasma 100.0 3.7E-80 8E-85 681.9 45.1 416 38-478 2-544 (755)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 3.7E-80 8E-85 698.5 46.1 444 21-478 5-755 (1053)
6 PRK15122 magnesium-transportin 100.0 6.7E-80 1.5E-84 689.1 47.5 452 16-478 20-647 (903)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.9E-79 4.1E-84 684.5 48.3 444 16-478 7-612 (867)
8 KOG0205 Plasma membrane H+-tra 100.0 1E-80 2.3E-85 630.8 29.0 447 22-478 17-594 (942)
9 KOG0204 Calcium transporting A 100.0 7.3E-79 1.6E-83 634.5 34.5 446 26-478 101-748 (1034)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 4.5E-77 9.8E-82 674.4 47.7 457 15-478 9-693 (997)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-76 4.3E-81 663.4 46.4 430 21-478 2-627 (884)
12 TIGR01517 ATPase-IIB_Ca plasma 100.0 3E-76 6.6E-81 665.6 47.2 442 27-478 43-678 (941)
13 TIGR01657 P-ATPase-V P-type AT 100.0 7.2E-77 1.6E-81 676.7 41.9 428 37-478 139-811 (1054)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3.7E-68 7.9E-73 598.0 40.7 405 66-478 1-640 (917)
15 KOG0208 Cation transport ATPas 100.0 1E-68 2.2E-73 565.6 31.2 428 38-478 161-862 (1140)
16 TIGR01652 ATPase-Plipid phosph 100.0 1E-63 2.3E-68 570.1 35.3 423 50-478 1-778 (1057)
17 PRK01122 potassium-transportin 100.0 3.9E-63 8.5E-68 532.4 36.0 352 67-478 28-517 (679)
18 PRK14010 potassium-transportin 100.0 2.8E-63 6.1E-68 533.1 34.6 366 67-478 27-513 (673)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 8.9E-64 1.9E-68 521.2 20.7 453 19-478 35-715 (1019)
20 TIGR01497 kdpB K+-transporting 100.0 8.3E-61 1.8E-65 513.4 35.8 367 67-478 27-518 (675)
21 KOG0209 P-type ATPase [Inorgan 100.0 4.9E-61 1.1E-65 497.7 25.6 438 26-478 148-816 (1160)
22 PLN03190 aminophospholipid tra 100.0 3.7E-59 8E-64 529.6 37.7 425 48-478 85-881 (1178)
23 COG2217 ZntA Cation transport 100.0 1.2E-53 2.6E-58 459.2 31.1 333 97-478 172-609 (713)
24 PRK11033 zntA zinc/cadmium/mer 100.0 2.1E-51 4.5E-56 452.3 33.4 327 97-478 205-638 (741)
25 TIGR01494 ATPase_P-type ATPase 100.0 6.9E-50 1.5E-54 425.1 31.3 314 107-478 7-416 (499)
26 KOG0207 Cation transport ATPas 100.0 2.9E-49 6.2E-54 418.4 26.8 337 95-478 337-795 (951)
27 TIGR01512 ATPase-IB2_Cd heavy 100.0 9.5E-49 2.1E-53 418.5 29.6 335 76-478 3-435 (536)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 2.3E-48 5.1E-53 417.7 30.3 347 76-478 3-457 (556)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 4.3E-48 9.3E-53 415.0 32.0 327 96-478 51-476 (562)
30 PRK10671 copA copper exporting 100.0 9.8E-48 2.1E-52 430.4 34.0 334 96-478 283-722 (834)
31 KOG0210 P-type ATPase [Inorgan 100.0 2.7E-48 5.9E-53 396.7 21.0 424 45-477 74-790 (1051)
32 KOG0206 P-type ATPase [General 100.0 5.9E-46 1.3E-50 410.1 23.4 424 46-478 28-804 (1151)
33 COG2216 KdpB High-affinity K+ 100.0 2E-43 4.3E-48 352.4 21.7 365 69-478 29-519 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 99.9 1.7E-22 3.7E-27 193.7 14.7 108 104-218 4-123 (230)
35 PF00702 Hydrolase: haloacid d 99.8 2.2E-19 4.8E-24 169.3 8.5 193 243-478 1-205 (215)
36 PF00690 Cation_ATPase_N: Cati 99.3 5.5E-12 1.2E-16 97.4 7.4 63 23-85 1-69 (69)
37 smart00831 Cation_ATPase_N Cat 98.9 2.7E-09 5.9E-14 80.9 6.9 53 37-89 10-63 (64)
38 PF13246 Hydrolase_like2: Puta 98.9 2.9E-09 6.3E-14 86.8 5.8 58 276-334 21-89 (91)
39 COG4087 Soluble P-type ATPase 97.5 0.00026 5.7E-09 60.2 6.5 82 380-478 20-103 (152)
40 KOG4383 Uncharacterized conser 92.9 0.29 6.3E-06 52.6 7.2 52 132-183 160-212 (1354)
41 TIGR02137 HSK-PSP phosphoserin 86.4 1.8 4E-05 40.5 6.3 27 452-478 128-154 (203)
42 TIGR03333 salvage_mtnX 2-hydro 68.2 6 0.00013 37.1 3.8 24 455-478 143-166 (214)
43 PF12710 HAD: haloacid dehalog 68.0 6.1 0.00013 35.8 3.7 71 393-478 92-185 (192)
44 KOG4383 Uncharacterized conser 66.3 13 0.00028 40.6 6.1 29 448-476 971-999 (1354)
45 TIGR01489 DKMTPPase-SF 2,3-dik 61.2 19 0.00041 32.4 5.6 23 456-478 149-172 (188)
46 PF03120 DNA_ligase_OB: NAD-de 55.0 7.5 0.00016 30.8 1.5 22 141-162 45-67 (82)
47 PF12710 HAD: haloacid dehalog 54.2 6.3 0.00014 35.7 1.2 14 246-259 1-14 (192)
48 TIGR01488 HAD-SF-IB Haloacid D 53.0 13 0.00027 33.2 3.0 27 452-478 138-168 (177)
49 PRK11507 ribosome-associated p 51.2 19 0.00041 27.6 3.1 25 132-156 39-63 (70)
50 PRK09552 mtnX 2-hydroxy-3-keto 50.7 15 0.00033 34.5 3.2 23 456-478 148-170 (219)
51 PF13275 S4_2: S4 domain; PDB: 48.8 13 0.00028 28.1 1.9 26 132-158 35-60 (65)
52 PF15584 Imm44: Immunity prote 48.8 7.9 0.00017 31.1 0.8 19 148-166 13-31 (94)
53 COG1188 Ribosome-associated he 47.3 39 0.00084 27.8 4.5 28 132-160 36-63 (100)
54 COG2179 Predicted hydrolase of 45.3 83 0.0018 28.5 6.7 94 345-477 20-119 (175)
55 COG4359 Uncharacterized conser 45.0 15 0.00033 33.7 2.1 24 455-478 146-169 (220)
56 KOG1615 Phosphoserine phosphat 42.8 20 0.00043 33.3 2.5 23 456-478 159-183 (227)
57 COG0560 SerB Phosphoserine pho 42.6 65 0.0014 30.3 6.1 76 389-478 76-170 (212)
58 PRK04980 hypothetical protein; 41.6 38 0.00083 28.0 3.7 51 143-195 29-82 (102)
59 TIGR01491 HAD-SF-IB-PSPlk HAD- 39.6 40 0.00086 30.6 4.1 16 243-258 4-19 (201)
60 PF11694 DUF3290: Protein of u 39.2 2.8E+02 0.006 24.6 9.6 62 95-156 43-116 (149)
61 PRK13582 thrH phosphoserine ph 38.5 28 0.00061 31.9 3.0 26 453-478 129-154 (205)
62 PF00356 LacI: Bacterial regul 37.8 38 0.00083 23.6 2.8 42 407-470 3-44 (46)
63 COG0272 Lig NAD-dependent DNA 37.0 48 0.001 36.6 4.7 63 141-218 363-426 (667)
64 TIGR00967 3a0501s007 preprotei 34.2 3.5E+02 0.0076 28.2 10.5 88 38-125 316-408 (410)
65 COG5547 Small integral membran 34.1 1.9E+02 0.0041 21.2 6.2 47 66-119 3-52 (62)
66 TIGR00338 serB phosphoserine p 34.1 49 0.0011 30.7 3.9 23 236-258 7-29 (219)
67 TIGR00739 yajC preprotein tran 31.9 74 0.0016 25.3 3.9 14 145-158 37-50 (84)
68 PLN02954 phosphoserine phospha 30.8 73 0.0016 29.6 4.5 73 390-478 84-179 (224)
69 PF09926 DUF2158: Uncharacteri 29.5 35 0.00076 24.6 1.5 12 147-158 2-13 (53)
70 PF01455 HupF_HypC: HupF/HypC 29.2 1E+02 0.0022 23.4 4.1 28 132-159 21-51 (68)
71 COG3086 RseC Positive regulato 28.7 4.1E+02 0.009 23.5 9.1 27 100-126 103-130 (150)
72 PF13309 HTH_22: HTH domain 28.4 51 0.0011 24.6 2.3 21 449-469 18-38 (64)
73 PRK09204 secY preprotein trans 26.7 6.8E+02 0.015 26.3 11.2 89 38-127 330-422 (426)
74 PRK05585 yajC preprotein trans 26.3 1.4E+02 0.0031 24.8 4.8 13 145-157 52-64 (106)
75 COG1862 YajC Preprotein transl 25.9 1.2E+02 0.0026 24.8 4.2 13 145-157 43-55 (97)
76 COG4988 CydD ABC-type transpor 25.9 4.8E+02 0.01 28.4 9.8 85 41-130 77-178 (559)
77 smart00306 HintN Hint (Hedgeho 25.8 57 0.0012 25.8 2.4 24 132-155 76-99 (100)
78 PF02699 YajC: Preprotein tran 25.8 1.2E+02 0.0026 23.9 4.1 14 144-157 35-48 (82)
79 TIGR02988 YaaA_near_RecF S4 do 25.5 96 0.0021 22.4 3.3 23 132-154 36-58 (59)
80 PF06738 DUF1212: Protein of u 25.3 4.9E+02 0.011 23.6 8.9 42 22-66 63-107 (193)
81 PRK12907 secY preprotein trans 24.5 6.5E+02 0.014 26.6 10.5 89 38-126 332-425 (434)
82 COG3411 Ferredoxin [Energy pro 24.1 97 0.0021 23.3 3.0 25 447-471 27-51 (64)
83 COG0201 SecY Preprotein transl 23.7 3.4E+02 0.0074 28.6 8.1 87 38-125 335-425 (436)
84 PF00122 E1-E2_ATPase: E1-E2 A 23.3 2.7E+02 0.0058 25.9 6.9 61 105-169 2-62 (230)
85 PF05568 ASFV_J13L: African sw 23.1 2.5E+02 0.0054 24.7 5.8 15 48-62 12-26 (189)
86 CHL00161 secY preprotein trans 21.8 9.2E+02 0.02 25.2 11.0 90 38-127 318-412 (417)
87 smart00354 HTH_LACI helix_turn 21.4 1.6E+02 0.0034 22.1 3.9 20 450-469 25-44 (70)
88 PRK05886 yajC preprotein trans 21.3 1.8E+02 0.0038 24.4 4.5 11 146-156 39-49 (109)
89 COG2501 S4-like RNA binding pr 21.2 1E+02 0.0022 23.9 2.7 25 132-156 39-63 (73)
90 smart00532 LIGANc Ligase N fam 21.1 45 0.00097 35.2 1.1 22 141-162 358-380 (441)
91 PF08774 VRR_NUC: VRR-NUC doma 21.1 1.2E+02 0.0026 24.4 3.5 24 450-474 73-96 (100)
92 PRK11133 serB phosphoserine ph 20.9 1.2E+02 0.0027 30.5 4.1 25 454-478 246-274 (322)
93 PRK08568 preprotein translocas 20.1 7.2E+02 0.016 26.4 9.9 82 38-126 366-452 (462)
94 PRK06788 flagellar motor switc 20.1 38 0.00082 28.9 0.2 39 138-176 39-77 (119)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-83 Score=666.62 Aligned_cols=443 Identities=30% Similarity=0.456 Sum_probs=386.2
Q ss_pred ccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCC
Q 036987 22 VLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKD 95 (478)
Q Consensus 22 ~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 95 (478)
+.|..+++|+++.|.+ ||.+|+.+|++.||.|+++... .+.|+.+++||.+|+..+|+++|++||.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 5677899999999998 9999999999999999999865 788999999999999999999999999997
Q ss_pred CchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEe
Q 036987 96 PDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVE 168 (478)
Q Consensus 96 ~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~ 168 (478)
.|.++++|.+ ++++.+.++|||+++|++++|+++. |+|+|+.+.+++++|||||||.|+.||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6767776666 8889999999999999999999988 9999999999999999999999999999999999999
Q ss_pred cCcEEEeccccccccccccCCceeecCCC--------------CeeeeccEEeeeeEEEEEEEe----e-----------
Q 036987 169 GDPLKIDRFQFCLWSALTGESLPVTKNPG--------------DGVYSGSTCKQGEIAAVVIAN----C----------- 219 (478)
Q Consensus 169 g~~~~vde~~~~~~S~LTGEs~pv~K~~~--------------~~v~aGt~v~~g~~~~~V~~t----~----------- 219 (478)
..++.+|| |+|||||.|+.|... +++|+||.|..|.++++|++| +
T Consensus 156 ~~sl~iDe------S~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~ 229 (972)
T KOG0202|consen 156 AKSLRIDE------SSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT 229 (972)
T ss_pred eeeeeeec------ccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence 98999999 999999999999542 689999999999999999999 2
Q ss_pred ---------------------------------cccccc-----------------------------------------
Q 036987 220 ---------------------------------NGHLHL----------------------------------------- 225 (478)
Q Consensus 220 ---------------------------------~g~~~~----------------------------------------- 225 (478)
+|+|+.
T Consensus 230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 222220
Q ss_pred -----cccceecchhHHhhhcceeEEEecCccccccCchh----------------------------------------
Q 036987 226 -----IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT---------------------------------------- 260 (478)
Q Consensus 226 -----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~---------------------------------------- 260 (478)
|++++||++.++|+||.+++||+|||||||+|+|+
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~ 389 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDK 389 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccccc
Confidence 99999999999999999999999999999999999
Q ss_pred -------HHHHHHHHHhccc-----c------cCChhhHHHHHHcCC---cc-----e----------------eeeEee
Q 036987 261 -------DMVVLMAARASTL-----E------NQVAIDGAIVSMLAG---PK-----K----------------ARVHFL 298 (478)
Q Consensus 261 -------~~~l~~~~~~~~~-----~------~~~p~~~ai~~~~~~---~~-----~----------------~~~~~~ 298 (478)
.+++..++.|+.. . -+.|+|.|+...+.. +. . .++..+
T Consensus 390 ~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~el 469 (972)
T KOG0202|consen 390 AGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAEL 469 (972)
T ss_pred ccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEe
Confidence 2334444444321 0 247889998765421 00 0 115889
Q ss_pred cCCCCCceEEEEEEeCCCe--EEEEEeCcHHHHHHhcc--------------HHHHHHHHHHHHHHhhccceeeEEEeee
Q 036987 299 LFNPTDKRAAITYVDGAGI--MHRVSKGAPEQILHLAH--------------KEIEKKVHGIIDKFAECGLRSLAVAWQV 362 (478)
Q Consensus 299 ~F~s~~k~~sv~~~~~~g~--~~~~~KGa~e~i~~~c~--------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~ 362 (478)
||++++|+|++.+.+..++ +..|+|||||.|+++|+ +..++.+.+...+|+++|+||+++|+++
T Consensus 470 pFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~ 549 (972)
T KOG0202|consen 470 PFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKD 549 (972)
T ss_pred ecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccC
Confidence 9999999999999865554 78999999999999996 4568889999999999999999999997
Q ss_pred ccc-cc------cCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCC--
Q 036987 363 INL-CR------KRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNM-- 419 (478)
Q Consensus 363 ~~~-~~------~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~-- 419 (478)
.+. .. +..++...|++|+|+|++++.||||++++++|+ |++.||.+|||++||...-
T Consensus 550 ~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed 629 (972)
T KOG0202|consen 550 SPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED 629 (972)
T ss_pred CcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc
Confidence 663 11 123577789999999999999999999999999 9999999999999986532
Q ss_pred ccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 420 YLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 420 ~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.++..++|.+.+ .++.++++.......||||++|.||.+||++||++|.+||||||||
T Consensus 630 ~~~~~~TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGV 687 (972)
T KOG0202|consen 630 VSSMALTGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGV 687 (972)
T ss_pred ccccccchhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCc
Confidence 356778887766 7899999999999999999999999999999999999999999997
No 2
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=4.2e-80 Score=689.78 Aligned_cols=438 Identities=28% Similarity=0.417 Sum_probs=377.8
Q ss_pred ccccCCHHHHHHHcCC----CCHHHHHHHHHhcCCCccCCCCc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCC
Q 036987 22 VLLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKKE-SKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDP 96 (478)
Q Consensus 22 ~~~~~~~~~~~~~l~~----Ls~~~v~~r~~~~G~N~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 96 (478)
..+..+.+++++.|++ ||++||++|+++||+|+++.+++ ++|..|+++|++|++++++++++++|+++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4667899999999987 99999999999999999998875 57788999999999999999999999976
Q ss_pred chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeC------CeEEEEeCCCCCcCcEEEEcCCCeeecc
Q 036987 97 DYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRD------GRWNEEDAAEMVPGDIISIKLGEIVSAD 163 (478)
Q Consensus 97 ~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~------g~~~~i~~~~lv~GDiv~v~~G~~IPaD 163 (478)
.|.+++++++ +++.+++++++++++++.++|+++. |+|| |++++|++++|||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 7877776665 8899999999999999999998876 9999 7899999999999999999999999999
Q ss_pred EEEEecCcEEEeccccccccccccCCceeecCCCC-------------eeeeccEEeeeeEEEEEEEe----ecccc---
Q 036987 164 ARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGD-------------GVYSGSTCKQGEIAAVVIAN----CNGHL--- 223 (478)
Q Consensus 164 ~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~-------------~v~aGt~v~~g~~~~~V~~t----~~g~~--- 223 (478)
|+|++|+++.||| |+|||||.||.|.+++ .+|+||.|.+|++.++|++| .+|++
T Consensus 201 g~li~g~~l~VDE------S~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~ 274 (902)
T PRK10517 201 LRILQARDLFVAQ------ASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274 (902)
T ss_pred EEEEEcCceEEEe------cCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHH
Confidence 9999997789999 9999999999998874 79999999999999999999 11111
Q ss_pred -----------cc------------------------------------------------------------------c
Q 036987 224 -----------HL------------------------------------------------------------------I 226 (478)
Q Consensus 224 -----------~~------------------------------------------------------------------~ 226 (478)
++ +
T Consensus 275 v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak 354 (902)
T PRK10517 275 VSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSK 354 (902)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHh
Confidence 10 9
Q ss_pred ccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhcccc--cCChhhHHHHHHcCCcc-
Q 036987 227 QSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARASTLE--NQVAIDGAIVSMLAGPK- 291 (478)
Q Consensus 227 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~~--~~~p~~~ai~~~~~~~~- 291 (478)
+|++||+++++|+||++|+||||||||||+|+|+ ++++..++.++... .+||+|.|++.+++...
T Consensus 355 ~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~ 434 (902)
T PRK10517 355 QKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESA 434 (902)
T ss_pred CCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcch
Confidence 9999999999999999999999999999999998 34566665544322 35999999998865321
Q ss_pred ------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccH------------HHHHHHHHHHHHHhhccc
Q 036987 292 ------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK------------EIEKKVHGIIDKFAECGL 353 (478)
Q Consensus 292 ------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~------------~~~~~~~~~~~~~~~~G~ 353 (478)
..+++.+||++++|+|++++...++.+..++||+||.++++|+. ..++.+.+..+.++++|+
T Consensus 435 ~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 514 (902)
T PRK10517 435 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGL 514 (902)
T ss_pred hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCC
Confidence 13478899999999999998766677789999999999999961 235567777889999999
Q ss_pred eeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCC
Q 036987 354 RSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNM 419 (478)
Q Consensus 354 r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~ 419 (478)
|++++||++++..+.... ...|++|+|+|+++|+||+|||++++|+ |++.||.+||+++||..
T Consensus 515 rvlavA~k~~~~~~~~~~-~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-- 591 (902)
T PRK10517 515 RVVAVATKYLPAREGDYQ-RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-- 591 (902)
T ss_pred EEEEEEEecCCccccccc-cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--
Confidence 999999998764332211 1237899999999999999999999999 99999999999999952
Q ss_pred ccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 420 YLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 420 ~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
...++|.+.+ .++++++.+.+++.+||||++|+||.++|+.||++|++|||||||+
T Consensus 592 --~~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGv 647 (902)
T PRK10517 592 --GEVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGI 647 (902)
T ss_pred --cCceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCc
Confidence 2345555444 6889999999999999999999999999999999999999999996
No 3
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-81 Score=703.58 Aligned_cols=455 Identities=33% Similarity=0.469 Sum_probs=385.6
Q ss_pred CcccccccccCCHH--HHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 036987 16 TSLHQQVLLDIPIE--EVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIA 87 (478)
Q Consensus 16 ~~~~~~~~~~~~~~--~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (478)
..+....||..+.+ ++...+.+ |+++|+.+|++.||+|+++..+ .+.|..|+.+|++|+.++|+++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~ 95 (917)
T COG0474 16 TPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAF 95 (917)
T ss_pred ccCCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678888888 88888865 9999999999999999999765 6889999999999999999999999999
Q ss_pred HhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeec
Q 036987 88 LAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSA 162 (478)
Q Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPa 162 (478)
++...... .....+..+++++.+..++|+++++++.++++++. |+|||++++|+++||||||||.+++||+|||
T Consensus 96 ~~~~~~~~-~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPA 174 (917)
T COG0474 96 VGDWVDAG-VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPA 174 (917)
T ss_pred hhcccccC-cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcccc
Confidence 87311000 11112333347889999999999999999998876 9999999999999999999999999999999
Q ss_pred cEEEEecCcEEEeccccccccccccCCceeecCC--------------CCeeeeccEEeeeeEEEEEEEe----eccccc
Q 036987 163 DARLVEGDPLKIDRFQFCLWSALTGESLPVTKNP--------------GDGVYSGSTCKQGEIAAVVIAN----CNGHLH 224 (478)
Q Consensus 163 D~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~--------------~~~v~aGt~v~~g~~~~~V~~t----~~g~~~ 224 (478)
|++|++++++.||| |+|||||.|+.|.+ .+.+|+||.+.+|.+.++|++| ..|++.
T Consensus 175 D~rLl~~~~l~VdE------s~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia 248 (917)
T COG0474 175 DLRLLESSDLEVDE------SALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIA 248 (917)
T ss_pred ceEEEEecCceEEc------ccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHH
Confidence 99999997789999 99999999999963 4789999999999999999999 222211
Q ss_pred c-------------------------------------------------------------------------------
Q 036987 225 L------------------------------------------------------------------------------- 225 (478)
Q Consensus 225 ~------------------------------------------------------------------------------- 225 (478)
.
T Consensus 249 ~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ 328 (917)
T COG0474 249 RLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQR 328 (917)
T ss_pred HhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 1
Q ss_pred --cccceecchhHHhhhcceeEEEecCccccccCchh------H------------------HHHHHHHHhccc--c---
Q 036987 226 --IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------D------------------MVVLMAARASTL--E--- 274 (478)
Q Consensus 226 --~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------~------------------~~l~~~~~~~~~--~--- 274 (478)
+++++||+++++|+||++++||||||||||+|+|+ . .++..++.|+.. .
T Consensus 329 mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~ 408 (917)
T COG0474 329 MAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNG 408 (917)
T ss_pred HHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccC
Confidence 99999999999999999999999999999999999 1 134444555422 1
Q ss_pred ---cCChhhHHHHHHcCCcce-----------eeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc------
Q 036987 275 ---NQVAIDGAIVSMLAGPKK-----------ARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH------ 334 (478)
Q Consensus 275 ---~~~p~~~ai~~~~~~~~~-----------~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~------ 334 (478)
.+||+|.|+++++.+... .+++.+||+|++|||+++++..+|+++.++|||||.|+++|+
T Consensus 409 ~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~ 488 (917)
T COG0474 409 WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELE 488 (917)
T ss_pred ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCccc
Confidence 359999999998753211 238899999999999999986677799999999999999996
Q ss_pred ---HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH-----------
Q 036987 335 ---KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS----------- 400 (478)
Q Consensus 335 ---~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~----------- 400 (478)
+..++.+....++|+++|+|++++|||.++..+.....+..|++|+|+|+++|+||||+|++++|+
T Consensus 489 ~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~M 568 (917)
T COG0474 489 PLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWM 568 (917)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEE
Confidence 367889999999999999999999999776544433237789999999999999999999999999
Q ss_pred ---HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCC
Q 036987 401 ---DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDG 477 (478)
Q Consensus 401 ---D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDG 477 (478)
|++.||++||++|||.........++|.+.+ .++++++.+.+.+++||||++|+||.+||++||++|++|||||||
T Consensus 569 iTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDG 647 (917)
T COG0474 569 ITGDHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDG 647 (917)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 9999999999999987653222255666544 677889999999999999999999999999999999999999999
Q ss_pred C
Q 036987 478 T 478 (478)
Q Consensus 478 v 478 (478)
+
T Consensus 648 v 648 (917)
T COG0474 648 V 648 (917)
T ss_pred c
Confidence 6
No 4
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.7e-80 Score=681.94 Aligned_cols=416 Identities=55% Similarity=0.836 Sum_probs=367.7
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHH--HHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVI--IINSTTSFK 115 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~ 115 (478)
||++||++|+++||+|+++.++++.|+.|+++|++|++++|+++++++++++ .|.+++++++ +++.+++++
T Consensus 2 Ls~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~~ 74 (755)
T TIGR01647 2 LTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGFI 74 (755)
T ss_pred cCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHHH
Confidence 8999999999999999999877888999999999999999999999999986 7888777665 788899999
Q ss_pred HHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCc
Q 036987 116 EENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESL 190 (478)
Q Consensus 116 ~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~ 190 (478)
|+++++++.++|+++. |+|||++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.
T Consensus 75 qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDe------S~LTGES~ 148 (755)
T TIGR01647 75 EENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQ------AALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEc------ccccCCcc
Confidence 9999999999988764 999999999999999999999999999999999999995599999 99999999
Q ss_pred eeecCCCCeeeeccEEeeeeEEEEEEEe----eccc--------------ccc---------------------------
Q 036987 191 PVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGH--------------LHL--------------------------- 225 (478)
Q Consensus 191 pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~--------------~~~--------------------------- 225 (478)
|+.|.+|+.+|+||.|.+|++.++|++| ..|+ +++
T Consensus 149 PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~ 228 (755)
T TIGR01647 149 PVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG 228 (755)
T ss_pred ceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 1111 111
Q ss_pred ----------------------------------------cccceecchhHHhhhcceeEEEecCccccccCchh-----
Q 036987 226 ----------------------------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT----- 260 (478)
Q Consensus 226 ----------------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~----- 260 (478)
++|+++|+++++|+||++++||||||||||+|+|+
T Consensus 229 ~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~ 308 (755)
T TIGR01647 229 RGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL 308 (755)
T ss_pred cCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE
Confidence 99999999999999999999999999999999998
Q ss_pred --------HHHHHHHHHhcccccCChhhHHHHHHcCCcc-----eeeeEeecCCCCCceEEEEEEeCC-CeEEEEEeCcH
Q 036987 261 --------DMVVLMAARASTLENQVAIDGAIVSMLAGPK-----KARVHFLLFNPTDKRAAITYVDGA-GIMHRVSKGAP 326 (478)
Q Consensus 261 --------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~-----~~~~~~~~F~s~~k~~sv~~~~~~-g~~~~~~KGa~ 326 (478)
++++.+++.++.....||++.|+++++.+.. ....+.+||++.+|+|++++...+ |+.+.++||||
T Consensus 309 ~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~ 388 (755)
T TIGR01647 309 PFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAP 388 (755)
T ss_pred ecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCCh
Confidence 2466777766544455999999999875332 234678999999999999887543 77788999999
Q ss_pred HHHHHhcc--HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH----
Q 036987 327 EQILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS---- 400 (478)
Q Consensus 327 e~i~~~c~--~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~---- 400 (478)
|.++++|+ ...++++.+.+++++++|+|++++|+++ .+++|+|+|+++|+||+|||++++|+
T Consensus 389 e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~ 456 (755)
T TIGR01647 389 QVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD------------EEGRWHFLGLLPLFDPPRHDTKETIERARH 456 (755)
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc------------CCCCcEEEEEeeccCCChhhHHHHHHHHHH
Confidence 99999997 3456778888999999999999999973 15789999999999999999999999
Q ss_pred ----------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCE
Q 036987 401 ----------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHI 470 (478)
Q Consensus 401 ----------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~ 470 (478)
|++.||.+||+++||.....+++.+......+.++.+++.+.+++.+||||++|+||+++|+.||++|++
T Consensus 457 aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~ 536 (755)
T TIGR01647 457 LGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHL 536 (755)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCE
Confidence 9999999999999998765566555433334467888999999999999999999999999999999999
Q ss_pred EEEeCCCC
Q 036987 471 SGMTGDGT 478 (478)
Q Consensus 471 V~m~GDGv 478 (478)
|+|||||+
T Consensus 537 VamvGDGv 544 (755)
T TIGR01647 537 VGMTGDGV 544 (755)
T ss_pred EEEEcCCc
Confidence 99999996
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.7e-80 Score=698.54 Aligned_cols=444 Identities=28% Similarity=0.388 Sum_probs=377.7
Q ss_pred cccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCC
Q 036987 21 QVLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGK 94 (478)
Q Consensus 21 ~~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (478)
.+||..+++++++.|++ ||++||++|+++||+|+++.++ +++|+.|++||++|+.++|+++++++++++
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~----- 79 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh-----
Confidence 37999999999999987 9999999999999999999876 678899999999999999999999999986
Q ss_pred CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEE
Q 036987 95 DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLV 167 (478)
Q Consensus 95 ~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl 167 (478)
.|.+++++++ ++++++.++|++++++++++|+++. |+|||++++|+++||||||||.|++||+|||||+|+
T Consensus 80 --~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi 157 (1053)
T TIGR01523 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLI 157 (1053)
T ss_pred --hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEE
Confidence 8888776666 8999999999999999999999876 999999999999999999999999999999999999
Q ss_pred ecCcEEEeccccccccccccCCceeecCCC---------------CeeeeccEEeeeeEEEEEEEe--------------
Q 036987 168 EGDPLKIDRFQFCLWSALTGESLPVTKNPG---------------DGVYSGSTCKQGEIAAVVIAN-------------- 218 (478)
Q Consensus 168 ~g~~~~vde~~~~~~S~LTGEs~pv~K~~~---------------~~v~aGt~v~~g~~~~~V~~t-------------- 218 (478)
+++++.||| |+|||||.||.|.+. +++|+||.|.+|+++++|++|
T Consensus 158 ~~~~L~VDE------S~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~ 231 (1053)
T TIGR01523 158 ETKNFDTDE------ALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQ 231 (1053)
T ss_pred EeCceEEEc------hhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHh
Confidence 998899999 999999999999642 578999999999999999999
Q ss_pred ecc---------------------------------------cccc----------------------------------
Q 036987 219 CNG---------------------------------------HLHL---------------------------------- 225 (478)
Q Consensus 219 ~~g---------------------------------------~~~~---------------------------------- 225 (478)
... .+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 311 (1053)
T TIGR01523 232 GDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAI 311 (1053)
T ss_pred hhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 100 1111
Q ss_pred ------------------------------cccceecchhHHhhhcceeEEEecCccccccCchh------H--------
Q 036987 226 ------------------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------D-------- 261 (478)
Q Consensus 226 ------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------~-------- 261 (478)
+++++||+++++|+||++++||+|||||||+|+|+ .
T Consensus 312 ~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~ 391 (1053)
T TIGR01523 312 YAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISID 391 (1053)
T ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEec
Confidence 99999999999999999999999999999999996 0
Q ss_pred ---------------------------------------------------------HHHHHHHHhccc-----------
Q 036987 262 ---------------------------------------------------------MVVLMAARASTL----------- 273 (478)
Q Consensus 262 ---------------------------------------------------------~~l~~~~~~~~~----------- 273 (478)
.++..++.|+..
T Consensus 392 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~ 471 (1053)
T TIGR01523 392 NSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCW 471 (1053)
T ss_pred CCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCce
Confidence 012223333210
Q ss_pred -ccCChhhHHHHHHcCCc----------------------------------ceeeeEeecCCCCCceEEEEEEeCCC-e
Q 036987 274 -ENQVAIDGAIVSMLAGP----------------------------------KKARVHFLLFNPTDKRAAITYVDGAG-I 317 (478)
Q Consensus 274 -~~~~p~~~ai~~~~~~~----------------------------------~~~~~~~~~F~s~~k~~sv~~~~~~g-~ 317 (478)
..++|+|.|++.++... ...+++.+||+|++|||+++++..++ .
T Consensus 472 ~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~ 551 (1053)
T TIGR01523 472 KAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGET 551 (1053)
T ss_pred eeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCE
Confidence 11489999998875210 01347889999999999999986544 4
Q ss_pred EEEEEeCcHHHHHHhccH--------------HHHHHHHHHHHHHhhccceeeEEEeeeccccccC--------CCCCCC
Q 036987 318 MHRVSKGAPEQILHLAHK--------------EIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKR--------GTKDNP 375 (478)
Q Consensus 318 ~~~~~KGa~e~i~~~c~~--------------~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~--------~~~~~~ 375 (478)
+++|+|||||.|+++|+. ..++.+.+.+++|+++|+||+++||+.++..+.. ..++..
T Consensus 552 ~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~ 631 (1053)
T TIGR01523 552 YNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATA 631 (1053)
T ss_pred EEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhh
Confidence 789999999999999962 2356788889999999999999999988653211 123456
Q ss_pred CCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCC--------cccccccccccccc
Q 036987 376 GGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNM--------YLSSSLLRESKDET 433 (478)
Q Consensus 376 e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~--------~~~~~~~g~~~~~~ 433 (478)
|++|+|+|+++|+||+|++++++|+ |++.||.+||+++||.+.- .....++|.+.+ .
T Consensus 632 e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~ 710 (1053)
T TIGR01523 632 ESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-A 710 (1053)
T ss_pred ccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-h
Confidence 8999999999999999999999999 9999999999999996420 012345665544 6
Q ss_pred CCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 434 NSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 434 ~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
++.+++.+.+....||||++|+||.++|+.||++|++|+|||||+
T Consensus 711 l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGv 755 (1053)
T TIGR01523 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGV 755 (1053)
T ss_pred cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCc
Confidence 778888999998999999999999999999999999999999996
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=6.7e-80 Score=689.06 Aligned_cols=452 Identities=29% Similarity=0.426 Sum_probs=384.4
Q ss_pred CcccccccccCCHHHHHHHcCC----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Q 036987 16 TSLHQQVLLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAH 90 (478)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~l~~----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 90 (478)
+++.-...|+.+.+++++.|++ ||++||++|+++||+|+++.++ +++|+.|+++|++|+.++|++++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~ 99 (903)
T PRK15122 20 KSMRIAREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDY 99 (903)
T ss_pred cchHHHHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4455457889999999999987 9999999999999999999876 5678899999999999999999999999853
Q ss_pred C----CCCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeC------CeEEEEeCCCCCcCcEEE
Q 036987 91 G----GGKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRD------GRWNEEDAAEMVPGDIIS 153 (478)
Q Consensus 91 ~----~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~------g~~~~i~~~~lv~GDiv~ 153 (478)
. .+....|.+++++++ +++.+++++|+++++++.++|+++. |+|| |++++|++++|||||+|.
T Consensus 100 ~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~ 179 (903)
T PRK15122 100 WLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVH 179 (903)
T ss_pred HhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEE
Confidence 1 122246888877665 8888999999999999999998876 9999 489999999999999999
Q ss_pred EcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCC-----------------------CCeeeeccEEeeee
Q 036987 154 IKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNP-----------------------GDGVYSGSTCKQGE 210 (478)
Q Consensus 154 v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~-----------------------~~~v~aGt~v~~g~ 210 (478)
|++||+|||||+|++|+.+.||| |+|||||.|+.|.+ ++.+|+||.|.+|+
T Consensus 180 l~~Gd~IPaDg~li~g~~l~VDE------S~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~ 253 (903)
T PRK15122 180 LSAGDMIPADVRLIESRDLFISQ------AVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGT 253 (903)
T ss_pred ECCCCEEeeeEEEEEcCceEEEc------cccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeee
Confidence 99999999999999997789999 99999999999975 26899999999999
Q ss_pred EEEEEEEe----ecccccc-------------------------------------------------------------
Q 036987 211 IAAVVIAN----CNGHLHL------------------------------------------------------------- 225 (478)
Q Consensus 211 ~~~~V~~t----~~g~~~~------------------------------------------------------------- 225 (478)
+.++|++| .+|++.+
T Consensus 254 ~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe 333 (903)
T PRK15122 254 ATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPE 333 (903)
T ss_pred EEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccc
Confidence 99999999 1111100
Q ss_pred ------------------cccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhccc--
Q 036987 226 ------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARASTL-- 273 (478)
Q Consensus 226 ------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~-- 273 (478)
++|+++|+++++|+||++++||||||||||+|+|+ ++++.+++.++..
T Consensus 334 ~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~~~~ 413 (903)
T PRK15122 334 MLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQS 413 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999998 2356655543322
Q ss_pred ccCChhhHHHHHHcCCcc-------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccH-----------
Q 036987 274 ENQVAIDGAIVSMLAGPK-------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK----------- 335 (478)
Q Consensus 274 ~~~~p~~~ai~~~~~~~~-------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~----------- 335 (478)
..+||++.|++.++.... ..+++.+||++.+++|++++...+|+++.++|||||.++++|+.
T Consensus 414 ~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~ 493 (903)
T PRK15122 414 GMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLD 493 (903)
T ss_pred CCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCC
Confidence 235999999998874321 23478899999999999998766778889999999999999961
Q ss_pred -HHHHHHHHHHHHHhhccceeeEEEeeeccccccC-CCCCCCCCCcEEEEEeecCCCCCcCcHHHHH-------------
Q 036987 336 -EIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKR-GTKDNPGGPWEFVGLLPLFDPPHHDSAETIS------------- 400 (478)
Q Consensus 336 -~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~-~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~------------- 400 (478)
..++.+.+..++++++|+|++++||++++..+.. ...+..|++|+|+|+++|+||+|||++++|+
T Consensus 494 ~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miT 573 (903)
T PRK15122 494 EARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLT 573 (903)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEEC
Confidence 2345677788899999999999999987643221 1223457899999999999999999999999
Q ss_pred -HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 401 -DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 401 -D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
|++.||.+||+++||.. +..++|.+.+ .|+++++.+.+++.+||||++|+||+++|+.||++|++|||||||+
T Consensus 574 GD~~~tA~aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGv 647 (903)
T PRK15122 574 GDNPIVTAKICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGI 647 (903)
T ss_pred CCCHHHHHHHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCc
Confidence 99999999999999953 3455565544 6889999999999999999999999999999999999999999996
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.9e-79 Score=684.51 Aligned_cols=444 Identities=27% Similarity=0.403 Sum_probs=379.6
Q ss_pred Cccccc-ccccCCHHHHHHHcCC----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 036987 16 TSLHQQ-VLLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALA 89 (478)
Q Consensus 16 ~~~~~~-~~~~~~~~~~~~~l~~----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 89 (478)
+++..+ +.|.++.+++++.|++ ||++||++|+++||+|+++.++ .++|+.|+++|++|++++|+++++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~ 86 (867)
T TIGR01524 7 KQGNNLLKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD 86 (867)
T ss_pred hHHHHHHHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 344444 4778899999999987 9999999999999999999876 467889999999999999999999999986
Q ss_pred cCCCCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----Eee------CCeEEEEeCCCCCcCcEEEEcC
Q 036987 90 HGGGKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLR------DGRWNEEDAAEMVPGDIISIKL 156 (478)
Q Consensus 90 ~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r------~g~~~~i~~~~lv~GDiv~v~~ 156 (478)
.|.+++++++ +++.+++++++++++++.++|+++. |+| ||++++|+++||||||+|.|++
T Consensus 87 -------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~ 159 (867)
T TIGR01524 87 -------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAA 159 (867)
T ss_pred -------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECC
Confidence 7887776655 8889999999999999999988766 999 9999999999999999999999
Q ss_pred CCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCC-------------eeeeccEEeeeeEEEEEEEe----e
Q 036987 157 GEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGD-------------GVYSGSTCKQGEIAAVVIAN----C 219 (478)
Q Consensus 157 G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~-------------~v~aGt~v~~g~~~~~V~~t----~ 219 (478)
||+|||||+|++|+++.||| |+|||||.|+.|.+++ .+|+||.|.+|+++++|++| .
T Consensus 160 Gd~VPaDg~li~g~~l~VDE------S~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~ 233 (867)
T TIGR01524 160 GDIIPADARVISARDLFINQ------SALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTW 233 (867)
T ss_pred CCEEcccEEEEecCceEEEc------ccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccH
Confidence 99999999999996789999 9999999999998864 69999999999999999999 1
Q ss_pred cccc-------------cc-------------------------------------------------------------
Q 036987 220 NGHL-------------HL------------------------------------------------------------- 225 (478)
Q Consensus 220 ~g~~-------------~~------------------------------------------------------------- 225 (478)
.|++ ++
T Consensus 234 ~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g 313 (867)
T TIGR01524 234 FGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKG 313 (867)
T ss_pred HHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 1111 11
Q ss_pred -----cccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhccc--ccCChhhHHHHHH
Q 036987 226 -----IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARASTL--ENQVAIDGAIVSM 286 (478)
Q Consensus 226 -----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~--~~~~p~~~ai~~~ 286 (478)
++|++||+++++|+||++++||||||||||+|+|+ ++++.+++.++.. ..+||++.|++.+
T Consensus 314 ~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~ 393 (867)
T TIGR01524 314 AINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAK 393 (867)
T ss_pred HHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 99999999999999999999999999999999998 3355555543332 1249999999988
Q ss_pred cCCc-------ceeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc------------HHHHHHHHHHHHH
Q 036987 287 LAGP-------KKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH------------KEIEKKVHGIIDK 347 (478)
Q Consensus 287 ~~~~-------~~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~------------~~~~~~~~~~~~~ 347 (478)
+... ...+++.+||+|++|+|++++...++.++.++||+||.++++|+ ++.++.+.+.++.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~ 473 (867)
T TIGR01524 394 LDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAE 473 (867)
T ss_pred HHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHH
Confidence 7532 12347789999999999998876555678999999999999996 1235677888899
Q ss_pred HhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHc
Q 036987 348 FAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKL 413 (478)
Q Consensus 348 ~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~ 413 (478)
|+++|+|++++||++++..+.+. .+..|++|+|+|+++|+||+|||++++|+ |++.||.+||+++
T Consensus 474 ~a~~G~rvlavA~~~~~~~~~~~-~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l 552 (867)
T TIGR01524 474 MNRQGIRVIAVATKTLKVGEADF-TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV 552 (867)
T ss_pred HHhcCCEEEEEEEeccCcccccc-cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 99999999999999876533221 11237899999999999999999999999 9999999999999
Q ss_pred CCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 414 GMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 414 Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
||.+ ...++|.+.+ .++.+++.+.+.+.+||||++||||+++|+.||++|++|||||||+
T Consensus 553 GI~~----~~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGv 612 (867)
T TIGR01524 553 GIDA----NDFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGI 612 (867)
T ss_pred CCCC----CCeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCc
Confidence 9953 2345555443 6788899999999999999999999999999999999999999996
No 8
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-80 Score=630.83 Aligned_cols=447 Identities=74% Similarity=1.101 Sum_probs=421.2
Q ss_pred ccccCCHHHHHHHcCC----CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 036987 22 VLLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPD 97 (478)
Q Consensus 22 ~~~~~~~~~~~~~l~~----Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 97 (478)
|..++|++++.+.|.+ ||++|+++|++.||+|++..++.+.+++|+..|.+|+.|++..+|++.+.+.-+++++++
T Consensus 17 dl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~D 96 (942)
T KOG0205|consen 17 DLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPD 96 (942)
T ss_pred ccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 5888999999999988 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecC
Q 036987 98 YHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGD 170 (478)
Q Consensus 98 ~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~ 170 (478)
|.++..|.. ++++.++|+||+++.++..+|+... |+|||+|.++.+.+||||||+.++.|++|||||++++|+
T Consensus 97 W~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD 176 (942)
T KOG0205|consen 97 WQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD 176 (942)
T ss_pred hhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC
Confidence 999887766 8999999999999999999998766 999999999999999999999999999999999999999
Q ss_pred cEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe-----------------ecccccc--------
Q 036987 171 PLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN-----------------CNGHLHL-------- 225 (478)
Q Consensus 171 ~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t-----------------~~g~~~~-------- 225 (478)
.++||+ |.|||||.||.|++|+.+|+||+|.+|++.++|++| ..|||++
T Consensus 177 ~LkiDQ------SAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 177 PLKIDQ------SALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ccccch------hhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhH
Confidence 999999 999999999999999999999999999999999999 5677776
Q ss_pred -----------------------------------------------------------cccceecchhHHhhhcceeEE
Q 036987 226 -----------------------------------------------------------IQSAITKRMTAIEEMAGMDVL 246 (478)
Q Consensus 226 -----------------------------------------------------------~~~ilvk~~~~~e~lg~v~~i 246 (478)
++|.++|++.++|.|+.++++
T Consensus 251 ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVL 330 (942)
T KOG0205|consen 251 CICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 330 (942)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEE
Confidence 999999999999999999999
Q ss_pred EecCccccccCchh---------------HHHHHHHHHhcccccCChhhHHHHHHcCCcceee-----eEeecCCCCCce
Q 036987 247 CSDKTGTLTLNKLT---------------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKAR-----VHFLLFNPTDKR 306 (478)
Q Consensus 247 ~~DKTGTLT~~~~~---------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~-----~~~~~F~s~~k~ 306 (478)
|+|||||||.|+++ ++++..|+.++...+.|.+|+|++..+.+|.+++ ++++|||+..||
T Consensus 331 CSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Kr 410 (942)
T KOG0205|consen 331 CSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKR 410 (942)
T ss_pred eecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccc
Confidence 99999999999999 6788889999888888999999999999987754 899999999999
Q ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHhcc--HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEE
Q 036987 307 AAITYVDGAGIMHRVSKGAPEQILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGL 384 (478)
Q Consensus 307 ~sv~~~~~~g~~~~~~KGa~e~i~~~c~--~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~ 384 (478)
.+..+.+++|+.+..+|||||.|++.|. .++++.+.+.+++|+++|+|.+++|++..++.. .+.....|.|+|+
T Consensus 411 ta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~----~~~~g~pw~~~gl 486 (942)
T KOG0205|consen 411 TALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT----KESPGGPWEFVGL 486 (942)
T ss_pred eEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhcccccc----ccCCCCCcccccc
Confidence 9999999999999999999999999998 678999999999999999999999999876433 3445678999999
Q ss_pred eecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEE
Q 036987 385 LPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFA 450 (478)
Q Consensus 385 i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~a 450 (478)
.-+.||||.++.++|. |....|+..+|++|+.++|.++..+-|...+..+....+++++.+.+-||
T Consensus 487 lp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred cccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 9999999999999999 88999999999999999999988888888788889999999999999999
Q ss_pred ecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 451 GLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 451 r~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.+.||||+++|+.||++||+++|+|||+
T Consensus 567 gVfpehKy~iV~~Lq~r~hi~gmtgdgv 594 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQERKHIVGMTGDGV 594 (942)
T ss_pred ccCHHHHHHHHHHHhhcCceecccCCCc
Confidence 9999999999999999999999999996
No 9
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-79 Score=634.54 Aligned_cols=446 Identities=25% Similarity=0.329 Sum_probs=369.9
Q ss_pred CCHHHHHHHcCC-----C--CHHHHHHHHHhcCCCccCCCCc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CCCCCC
Q 036987 26 IPIEEVFENLKC-----L--TSDDVKERLNLFGYNRLEGKKE-SKILKYLGCMCNPLSWVMEAAAIMAIALAH-GGGKDP 96 (478)
Q Consensus 26 ~~~~~~~~~l~~-----L--s~~~v~~r~~~~G~N~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 96 (478)
-.++.+++.|++ + +.++..+|++.||.|.++++++ ++|...|+.|.+...++|.++|++|+.+++ .++.+.
T Consensus 101 gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~ 180 (1034)
T KOG0204|consen 101 GGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIED 180 (1034)
T ss_pred cCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCc
Confidence 368999999998 4 4589999999999999999875 556677999999999999999999999987 455567
Q ss_pred chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcC----e--EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEe
Q 036987 97 DYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQ----S--YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVE 168 (478)
Q Consensus 97 ~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~----~--v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~ 168 (478)
.|++++.|++ ++..+.....+|+.+++.++|++. . |+|||+.++|+..|||||||+.|+.||.|||||++++
T Consensus 181 GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~ 260 (1034)
T KOG0204|consen 181 GWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQ 260 (1034)
T ss_pred ccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEe
Confidence 9999998888 333344444555555555555432 2 9999999999999999999999999999999999999
Q ss_pred cCcEEEeccccccccccccCCceeecCC--CCeeeeccEEeeeeEEEEEEEeec----ccccc-----------------
Q 036987 169 GDPLKIDRFQFCLWSALTGESLPVTKNP--GDGVYSGSTCKQGEIAAVVIANCN----GHLHL----------------- 225 (478)
Q Consensus 169 g~~~~vde~~~~~~S~LTGEs~pv~K~~--~~~v~aGt~v~~g~~~~~V~~t~~----g~~~~----------------- 225 (478)
|+++.+|| |++||||.+++|.+ +.++++||.+++|+++++|+++.. |.++.
T Consensus 261 gn~L~iDE------SSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~ 334 (1034)
T KOG0204|consen 261 GNSLKIDE------SSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLN 334 (1034)
T ss_pred ccceeEec------ccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHH
Confidence 99999999 99999999999987 568999999999999999999811 11000
Q ss_pred --------------------------------------------------------------------------------
Q 036987 226 -------------------------------------------------------------------------------- 225 (478)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (478)
T Consensus 335 ~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~k 414 (1034)
T KOG0204|consen 335 GLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMK 414 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHH
Confidence
Q ss_pred ---cccceecchhHHhhhcceeEEEecCccccccCchh-----------H--------------HHHHHH-HHhccc---
Q 036987 226 ---IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-----------D--------------MVVLMA-ARASTL--- 273 (478)
Q Consensus 226 ---~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-----------~--------------~~l~~~-~~~~~~--- 273 (478)
+.+.|||+++|||+||+.++||+|||||||+|+|+ + +++..+ +.++..
T Consensus 415 kMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~ 494 (1034)
T KOG0204|consen 415 KMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVV 494 (1034)
T ss_pred HHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEE
Confidence 99999999999999999999999999999999999 0 111111 111100
Q ss_pred ----------ccCChhhHHHHHHcCC---------cceeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc
Q 036987 274 ----------ENQVAIDGAIVSMLAG---------PKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH 334 (478)
Q Consensus 274 ----------~~~~p~~~ai~~~~~~---------~~~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~ 334 (478)
..++|+|+|++.+... +.+...+++||+|.+|+|+++++.+++..+.++|||+|.|+..|+
T Consensus 495 ~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~ 574 (1034)
T KOG0204|consen 495 KPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCE 574 (1034)
T ss_pred ecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhh
Confidence 1148999999987521 222338999999999999999997776624999999999999998
Q ss_pred -------------HHHHHHHHHHHHHHhhccceeeEEEeeeccccc---cC-CCCCCCCCCcEEEEEeecCCCCCcCcHH
Q 036987 335 -------------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCR---KR-GTKDNPGGPWEFVGLLPLFDPPHHDSAE 397 (478)
Q Consensus 335 -------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~---~~-~~~~~~e~~l~~lG~i~~~D~lR~~~~~ 397 (478)
++.+..+++.++.|+++|+|++++||+++.... .+ ...+..+.+|+++|+++++||+|||+++
T Consensus 575 ~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~ 654 (1034)
T KOG0204|consen 575 YYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPE 654 (1034)
T ss_pred heECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHH
Confidence 455668999999999999999999999965441 12 2235678999999999999999999999
Q ss_pred HHH--------------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHH
Q 036987 398 TIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRR 463 (478)
Q Consensus 398 ~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~ 463 (478)
+|+ ||..||++||++|||...--.-..++|.++ +++++++..+++++++|+||.+|.||+-+|+.
T Consensus 655 AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~ 733 (1034)
T KOG0204|consen 655 AVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-RELSQEERDKIWPKLRVLARSSPNDKHLLVKG 733 (1034)
T ss_pred HHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-hhcCHHHHHhhhhhheeeecCCCchHHHHHHH
Confidence 999 999999999999999765332245666554 48999999999999999999999999999999
Q ss_pred HHhCCCEEEEeCCCC
Q 036987 464 LHDRKHISGMTGDGT 478 (478)
Q Consensus 464 lq~~g~~V~m~GDGv 478 (478)
|+.+|++||+||||+
T Consensus 734 L~~~g~VVAVTGDGT 748 (1034)
T KOG0204|consen 734 LIKQGEVVAVTGDGT 748 (1034)
T ss_pred HHhcCcEEEEecCCC
Confidence 999999999999997
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=4.5e-77 Score=674.41 Aligned_cols=457 Identities=22% Similarity=0.303 Sum_probs=379.6
Q ss_pred cCcccccccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 036987 15 CTSLHQQVLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIAL 88 (478)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (478)
+....+++||.++++++++.|++ ||++||++|+++||+|+++.++ .++|+.|+++|++|++++|++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~ 88 (997)
T TIGR01106 9 LKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLA 88 (997)
T ss_pred hhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34567789999999999999986 9999999999999999998865 56788999999999999999999998876
Q ss_pred hcC------CCCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEc
Q 036987 89 AHG------GGKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIK 155 (478)
Q Consensus 89 ~~~------~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~ 155 (478)
... ......|++++++++ ++++++++++++++++++++++++. |+|||++++|+++||||||+|.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~ 168 (997)
T TIGR01106 89 YGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVK 168 (997)
T ss_pred HHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEEC
Confidence 431 112246777776655 7888999999999999999998864 999999999999999999999999
Q ss_pred CCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCC----------eeeeccEEeeeeEEEEEEEe----ecc
Q 036987 156 LGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGD----------GVYSGSTCKQGEIAAVVIAN----CNG 221 (478)
Q Consensus 156 ~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~----------~v~aGt~v~~g~~~~~V~~t----~~g 221 (478)
+||+|||||++++|+.+.||| |+|||||.|+.|.+++ .+|+||.+.+|.+.++|++| ..|
T Consensus 169 ~Gd~IPaD~~il~~~~l~Vde------S~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g 242 (997)
T TIGR01106 169 GGDRIPADLRIISAQGCKVDN------SSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMG 242 (997)
T ss_pred CCCEEeeeEEEEEccCcEEEc------cccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhh
Confidence 999999999999997799999 9999999999998763 79999999999999999999 122
Q ss_pred cccc----------------------------------------------------------------------------
Q 036987 222 HLHL---------------------------------------------------------------------------- 225 (478)
Q Consensus 222 ~~~~---------------------------------------------------------------------------- 225 (478)
++.+
T Consensus 243 ~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~ 322 (997)
T TIGR01106 243 RIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA 322 (997)
T ss_pred HHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHH
Confidence 1110
Q ss_pred ----cccceecchhHHhhhcceeEEEecCccccccCchh-------------H------------------HHHHHHHHh
Q 036987 226 ----IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------------D------------------MVVLMAARA 270 (478)
Q Consensus 226 ----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------------~------------------~~l~~~~~~ 270 (478)
++|++||+++++|+||++++||||||||||+|+|+ + .++..++.|
T Consensus 323 ~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alc 402 (997)
T TIGR01106 323 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLC 402 (997)
T ss_pred HHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999999 0 234445554
Q ss_pred ccc---------------ccCChhhHHHHHHcCCc---------ceeeeEeecCCCCCceEEEEEEeC---CCeEEEEEe
Q 036987 271 STL---------------ENQVAIDGAIVSMLAGP---------KKARVHFLLFNPTDKRAAITYVDG---AGIMHRVSK 323 (478)
Q Consensus 271 ~~~---------------~~~~p~~~ai~~~~~~~---------~~~~~~~~~F~s~~k~~sv~~~~~---~g~~~~~~K 323 (478)
+.. ..++|+|.|+++++... ...+++.+||+|++|+|++++... ++.+++|+|
T Consensus 403 n~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~K 482 (997)
T TIGR01106 403 NRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMK 482 (997)
T ss_pred CCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEe
Confidence 321 12479999999886421 123478899999999999887632 246789999
Q ss_pred CcHHHHHHhcc------------HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCC----CC---CCCCCCcEEEEE
Q 036987 324 GAPEQILHLAH------------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRG----TK---DNPGGPWEFVGL 384 (478)
Q Consensus 324 Ga~e~i~~~c~------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~----~~---~~~e~~l~~lG~ 384 (478)
||||.|+++|+ ++.++.+.+.+++|+++|+|++++||+.++.++... .. +..|++|+|+|+
T Consensus 483 GApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGl 562 (997)
T TIGR01106 483 GAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGL 562 (997)
T ss_pred CChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEE
Confidence 99999999996 234677888899999999999999999886532211 11 123889999999
Q ss_pred eecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCcc----------------------ccccccc
Q 036987 385 LPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYL----------------------SSSLLRE 428 (478)
Q Consensus 385 i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~----------------------~~~~~g~ 428 (478)
++|+||||++++++|+ |++.||.++|+++||.+.-.. ...++|.
T Consensus 563 i~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~ 642 (997)
T TIGR01106 563 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642 (997)
T ss_pred EeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence 9999999999999999 999999999999999642100 1245555
Q ss_pred cccccCCcchHHHHhhcCC--EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 429 SKDETNSALPIDELIEKAD--GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 429 ~~~~~~~~~~~~~~l~~~~--v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
+.+ .++.+++.+.+.+.+ ||||++|+||++||+.||+.|++|+|+|||+
T Consensus 643 ~l~-~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ 693 (997)
T TIGR01106 643 DLK-DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 693 (997)
T ss_pred Hhh-hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCc
Confidence 443 577788888888765 9999999999999999999999999999996
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2e-76 Score=663.42 Aligned_cols=430 Identities=29% Similarity=0.448 Sum_probs=370.9
Q ss_pred cccccCCHHHHHHHcCC-----CC-HHHHHHHHHhcCCCccCCCC-chHHHHHHHHH-hhHHHHHHHHHHHHHHHHhcCC
Q 036987 21 QVLLDIPIEEVFENLKC-----LT-SDDVKERLNLFGYNRLEGKK-ESKILKYLGCM-CNPLSWVMEAAAIMAIALAHGG 92 (478)
Q Consensus 21 ~~~~~~~~~~~~~~l~~-----Ls-~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 92 (478)
-+||.++++++++.|++ || ++|+++|+++||+|+++.++ +++|+.|+++| .+|++++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 37899999999999986 99 99999999999999999876 67788999999 8999999999999999987
Q ss_pred CCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEE
Q 036987 93 GKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADAR 165 (478)
Q Consensus 93 ~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~ 165 (478)
.|.+++++++ +++.++.+++++++++++++|+++. |+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 7888776654 7888999999999999999998875 9999999999999999999999999999999999
Q ss_pred EEecCcEEEeccccccccccccCCceeecCCC--------------CeeeeccEEeeeeEEEEEEEe----eccccc---
Q 036987 166 LVEGDPLKIDRFQFCLWSALTGESLPVTKNPG--------------DGVYSGSTCKQGEIAAVVIAN----CNGHLH--- 224 (478)
Q Consensus 166 vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~--------------~~v~aGt~v~~g~~~~~V~~t----~~g~~~--- 224 (478)
|++|+++.||| |+|||||.|+.|.++ +.+|+||.|.+|++.++|++| ..|++.
T Consensus 155 ii~g~~l~VDE------S~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v 228 (884)
T TIGR01522 155 IVEAVDLSIDE------SNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMM 228 (884)
T ss_pred EEEcCceEEEc------ccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHh
Confidence 99997799999 999999999999886 389999999999999999999 122111
Q ss_pred -----------c------------------------------------------------------------------cc
Q 036987 225 -----------L------------------------------------------------------------------IQ 227 (478)
Q Consensus 225 -----------~------------------------------------------------------------------~~ 227 (478)
+ ++
T Consensus 229 ~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~ 308 (884)
T TIGR01522 229 QAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKK 308 (884)
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhc
Confidence 0 89
Q ss_pred cceecchhHHhhhcceeEEEecCccccccCchh-------H---------------------------------HHHHHH
Q 036987 228 SAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------D---------------------------------MVVLMA 267 (478)
Q Consensus 228 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------~---------------------------------~~l~~~ 267 (478)
|+++|+++++|+||++++||||||||||+|+|+ . .++..+
T Consensus 309 ~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (884)
T TIGR01522 309 RAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAG 388 (884)
T ss_pred CCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHH
Confidence 999999999999999999999999999999998 1 122233
Q ss_pred HHhcccc--------cCChhhHHHHHHcCCc-------ceeeeEeecCCCCCceEEEEEEe-CCCeEEEEEeCcHHHHHH
Q 036987 268 ARASTLE--------NQVAIDGAIVSMLAGP-------KKARVHFLLFNPTDKRAAITYVD-GAGIMHRVSKGAPEQILH 331 (478)
Q Consensus 268 ~~~~~~~--------~~~p~~~ai~~~~~~~-------~~~~~~~~~F~s~~k~~sv~~~~-~~g~~~~~~KGa~e~i~~ 331 (478)
+.|+... .+||+|.|++.++... ....++.+||+|.+|+|++++.. .+++++.++|||||.|+.
T Consensus 389 ~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~ 468 (884)
T TIGR01522 389 NLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLK 468 (884)
T ss_pred hhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHH
Confidence 3333221 1369999999886421 12347899999999999998875 356788999999999999
Q ss_pred hccH-------------HHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHH
Q 036987 332 LAHK-------------EIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAET 398 (478)
Q Consensus 332 ~c~~-------------~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~ 398 (478)
.|+. +.++.+.+.+++|+++|+|++++||+++ +.+|+|+|+++|+||+|||++++
T Consensus 469 ~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~------------~~~l~~lGli~l~Dp~r~~~~~~ 536 (884)
T TIGR01522 469 YCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE------------KGQLTFLGLVGINDPPRPGVKEA 536 (884)
T ss_pred hhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC------------CCCeEEEEEEeccCcchhHHHHH
Confidence 9962 2345677888899999999999999974 35789999999999999999999
Q ss_pred HH--------------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHH
Q 036987 399 IS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRL 464 (478)
Q Consensus 399 I~--------------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~l 464 (478)
|+ |+..||.++|+++||... ....++|.+.+ .++.+++.+.+.+..||||++|+||.++|+.|
T Consensus 537 i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~l 613 (884)
T TIGR01522 537 VTTLITGGVRIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKAL 613 (884)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHH
Confidence 99 999999999999999753 12344554443 67888999999999999999999999999999
Q ss_pred HhCCCEEEEeCCCC
Q 036987 465 HDRKHISGMTGDGT 478 (478)
Q Consensus 465 q~~g~~V~m~GDGv 478 (478)
|++|++|+|||||+
T Consensus 614 q~~g~~v~mvGDGv 627 (884)
T TIGR01522 614 QKRGDVVAMTGDGV 627 (884)
T ss_pred HHCCCEEEEECCCc
Confidence 99999999999996
No 12
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=3e-76 Score=665.65 Aligned_cols=442 Identities=23% Similarity=0.331 Sum_probs=371.8
Q ss_pred CHHHHHHHcCC-----CC--HHHHHHHHHhcCCCccCCCCc-hHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC------C
Q 036987 27 PIEEVFENLKC-----LT--SDDVKERLNLFGYNRLEGKKE-SKILKYLGCMCNPLSWVMEAAAIMAIALAHG------G 92 (478)
Q Consensus 27 ~~~~~~~~l~~-----Ls--~~~v~~r~~~~G~N~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~ 92 (478)
+++++++.|++ || ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 78889999987 99 999999999999999998875 6678899999999999999999999997632 2
Q ss_pred CCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe------EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccE
Q 036987 93 GKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS------YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADA 164 (478)
Q Consensus 93 ~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~------v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~ 164 (478)
+....|++++++++ +++.++.++++++.+++.+++++.. |+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 23347888877665 6778899999999999888887532 999999999999999999999999999999999
Q ss_pred EEEecCcEEEeccccccccccccCCceeecCCCCe--eeeccEEeeeeEEEEEEEe------------------------
Q 036987 165 RLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDG--VYSGSTCKQGEIAAVVIAN------------------------ 218 (478)
Q Consensus 165 ~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~--v~aGt~v~~g~~~~~V~~t------------------------ 218 (478)
+|++|+++.||| |+|||||.|+.|.+++. +|+||.|.+|.+.++|++|
T Consensus 203 ~li~g~~l~VdE------S~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~ 276 (941)
T TIGR01517 203 VFISGLSLEIDE------SSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQE 276 (941)
T ss_pred EEEEcCcEEEEe------cccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHH
Confidence 999998899999 99999999999998765 9999999999999999999
Q ss_pred -----------------------e-----c----cc----------ccc-------------------------------
Q 036987 219 -----------------------C-----N----GH----------LHL------------------------------- 225 (478)
Q Consensus 219 -----------------------~-----~----g~----------~~~------------------------------- 225 (478)
. . +. +..
T Consensus 277 ~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ 356 (941)
T TIGR01517 277 KLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKK 356 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH
Confidence 0 0 00 000
Q ss_pred --cccceecchhHHhhhcceeEEEecCccccccCchh-------H-----------------HHHHHHHHhccc------
Q 036987 226 --IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------D-----------------MVVLMAARASTL------ 273 (478)
Q Consensus 226 --~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------~-----------------~~l~~~~~~~~~------ 273 (478)
++|+++|+++++|+||++++||||||||||+|+|+ . +++..++.+++.
T Consensus 357 mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~ 436 (941)
T TIGR01517 357 MMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVD 436 (941)
T ss_pred HHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccC
Confidence 89999999999999999999999999999999998 1 112223332221
Q ss_pred ------ccCChhhHHHHHHcCCcc---------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccH---
Q 036987 274 ------ENQVAIDGAIVSMLAGPK---------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK--- 335 (478)
Q Consensus 274 ------~~~~p~~~ai~~~~~~~~---------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~--- 335 (478)
..+||+|.|+++++.... ...++.+||+|++|+|+++++..+++++.++|||||.++++|+.
T Consensus 437 ~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~ 516 (941)
T TIGR01517 437 RGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLD 516 (941)
T ss_pred CCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhh
Confidence 114799999998874211 12367899999999999999866667899999999999999962
Q ss_pred ---------HHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH------
Q 036987 336 ---------EIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS------ 400 (478)
Q Consensus 336 ---------~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~------ 400 (478)
+.++++.+.+++|+++|+|++++||++++.++.. ..+..|++|+|+|+++|+||+||+++++|+
T Consensus 517 ~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~-~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aG 595 (941)
T TIGR01517 517 SNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP-RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAG 595 (941)
T ss_pred cCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc-cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCC
Confidence 1245678888999999999999999987643321 223347899999999999999999999999
Q ss_pred --------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEE
Q 036987 401 --------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISG 472 (478)
Q Consensus 401 --------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~ 472 (478)
|++.||.+||+++||.+. ....++|.+.+ .++.+++.+.+.+.+||||++|+||+++|+.||++|++||
T Consensus 596 I~v~miTGD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVa 672 (941)
T TIGR01517 596 ITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVA 672 (941)
T ss_pred CEEEEECCCChHHHHHHHHHcCCCCC--CceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEE
Confidence 999999999999999753 12345555443 6778899999999999999999999999999999999999
Q ss_pred EeCCCC
Q 036987 473 MTGDGT 478 (478)
Q Consensus 473 m~GDGv 478 (478)
|||||+
T Consensus 673 m~GDGv 678 (941)
T TIGR01517 673 VTGDGT 678 (941)
T ss_pred EECCCC
Confidence 999996
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=7.2e-77 Score=676.67 Aligned_cols=428 Identities=23% Similarity=0.301 Sum_probs=353.5
Q ss_pred CCCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHH--HHHHHHHH
Q 036987 37 CLTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVI--IINSTTSF 114 (478)
Q Consensus 37 ~Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~ 114 (478)
+||++|+++|+++||+|.++.+++++|..|+++|.+||++++++++++|++- .+|++++++++ +++.+..+
T Consensus 139 GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~~~ 211 (1054)
T TIGR01657 139 GLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISLSV 211 (1054)
T ss_pred CCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHHHH
Confidence 4999999999999999999998888899999999999999998887777653 25666666665 77888889
Q ss_pred HHHHHHHHHHHHhhcCe----EeeCCeEEEEeCCCCCcCcEEEEc--CCCeeeccEEEEecCcEEEeccccccccccccC
Q 036987 115 KEENNAGNAAAALMAQS----YLRDGRWNEEDAAEMVPGDIISIK--LGEIVSADARLVEGDPLKIDRFQFCLWSALTGE 188 (478)
Q Consensus 115 ~~~~~~~~~~~~l~~~~----v~r~g~~~~i~~~~lv~GDiv~v~--~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGE 188 (478)
++++++.++++++.... |+|||++++|+++||||||+|.|+ +|++|||||+|++| ++.||| |+||||
T Consensus 212 ~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdE------S~LTGE 284 (1054)
T TIGR01657 212 YQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNE------SMLTGE 284 (1054)
T ss_pred HHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEec------ccccCC
Confidence 99999888888876432 999999999999999999999999 99999999999999 799999 999999
Q ss_pred CceeecCCC------------------CeeeeccEEee-------eeEEEEEEEe----ecccccc--------------
Q 036987 189 SLPVTKNPG------------------DGVYSGSTCKQ-------GEIAAVVIAN----CNGHLHL-------------- 225 (478)
Q Consensus 189 s~pv~K~~~------------------~~v~aGt~v~~-------g~~~~~V~~t----~~g~~~~-------------- 225 (478)
|.|+.|.+. +++|+||.+++ |.+.++|++| ..|++.+
T Consensus 285 S~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~ 364 (1054)
T TIGR01657 285 SVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYK 364 (1054)
T ss_pred ccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHH
Confidence 999999762 35999999995 7899999998 2232211
Q ss_pred ------------------------------------------------------------------cccceecchhHHhh
Q 036987 226 ------------------------------------------------------------------IQSAITKRMTAIEE 239 (478)
Q Consensus 226 ------------------------------------------------------------------~~~ilvk~~~~~e~ 239 (478)
++|++||++.++|+
T Consensus 365 ~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~ 444 (1054)
T TIGR01657 365 DSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINF 444 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCccccee
Confidence 99999999999999
Q ss_pred hcceeEEEecCccccccCchh-------H---H---------------HHHHHHHhccc------ccCChhhHHHHHHcC
Q 036987 240 MAGMDVLCSDKTGTLTLNKLT-------D---M---------------VVLMAARASTL------ENQVAIDGAIVSMLA 288 (478)
Q Consensus 240 lg~v~~i~~DKTGTLT~~~~~-------~---~---------------~l~~~~~~~~~------~~~~p~~~ai~~~~~ 288 (478)
||+++++|||||||||+|+|+ . . .+...+.|... ..+||+|.|++++.+
T Consensus 445 lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~ 524 (1054)
T TIGR01657 445 AGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATG 524 (1054)
T ss_pred cceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCC
Confidence 999999999999999999998 0 0 12222333221 125999999999863
Q ss_pred C------------------------cceeeeEeecCCCCCceEEEEEEeC-CCeEEEEEeCcHHHHHHhcc-HHHHHHHH
Q 036987 289 G------------------------PKKARVHFLLFNPTDKRAAITYVDG-AGIMHRVSKGAPEQILHLAH-KEIEKKVH 342 (478)
Q Consensus 289 ~------------------------~~~~~~~~~~F~s~~k~~sv~~~~~-~g~~~~~~KGa~e~i~~~c~-~~~~~~~~ 342 (478)
. .....++.+||+|++|||+++++.. ++++++|+|||||.|+++|. +..++++.
T Consensus 525 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~ 604 (1054)
T TIGR01657 525 WTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQ 604 (1054)
T ss_pred CEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHH
Confidence 1 1112378999999999999999853 35678999999999999997 34688899
Q ss_pred HHHHHHhhccceeeEEEeeecccccc----CCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHH
Q 036987 343 GIIDKFAECGLRSLAVAWQVINLCRK----RGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIA 404 (478)
Q Consensus 343 ~~~~~~~~~G~r~l~~A~~~~~~~~~----~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~ 404 (478)
+.+++|+++|+||+++|||+++..+. +..++..|++|+|+|+++|+||+||+++++|+ |++.
T Consensus 605 ~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~ 684 (1054)
T TIGR01657 605 EVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPL 684 (1054)
T ss_pred HHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHH
Confidence 99999999999999999999873221 22456789999999999999999999999999 9999
Q ss_pred HHHHHHHHcCCCCCCc---cc------------------------------------------------cccccccccc-
Q 036987 405 IAKETGRKLGMGTNMY---LS------------------------------------------------SSLLRESKDE- 432 (478)
Q Consensus 405 tA~~ia~~~Gi~~~~~---~~------------------------------------------------~~~~g~~~~~- 432 (478)
||.+||+++||.+.-. .+ ..++|+....
T Consensus 685 TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l 764 (1054)
T TIGR01657 685 TAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVL 764 (1054)
T ss_pred HHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHH
Confidence 9999999999964210 00 0122222211
Q ss_pred -cCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 433 -TNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 433 -~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.+..+++.+++.+.+||||++|+||.++|+.||+.|++|||||||+
T Consensus 765 ~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ 811 (1054)
T TIGR01657 765 QAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGA 811 (1054)
T ss_pred HHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 1344567788889999999999999999999999999999999996
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.7e-68 Score=598.04 Aligned_cols=405 Identities=27% Similarity=0.391 Sum_probs=335.6
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCC---CCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeC
Q 036987 66 YLGCMCNPLSWVMEAAAIMAIALAHGG---GKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRD 135 (478)
Q Consensus 66 ~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~ 135 (478)
+++||++|++++|+++++++++++... .....|++++++++ +++++++++++++++++.++++++. |+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 478999999999999999999987532 12247988888666 8899999999999999999998765 9999
Q ss_pred CeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCC-------------Ceeee
Q 036987 136 GRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPG-------------DGVYS 202 (478)
Q Consensus 136 g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~-------------~~v~a 202 (478)
|+++.|+++||||||+|.|++||.|||||+|++|+++.||| |+|||||.|+.|.++ +.+|+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~Vde------S~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~ 154 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQ------SILTGESVSVNKHTESVPDERAVNQDKKNMLFS 154 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEc------ccccCCCCcccccccccCccccCcccccceeee
Confidence 99999999999999999999999999999999997799999 999999999999875 78999
Q ss_pred ccEEeeeeEEEEEEEe----ecccc-------------------------------------------------c-----
Q 036987 203 GSTCKQGEIAAVVIAN----CNGHL-------------------------------------------------H----- 224 (478)
Q Consensus 203 Gt~v~~g~~~~~V~~t----~~g~~-------------------------------------------------~----- 224 (478)
||.+.+|++.++|++| ..|++ .
T Consensus 155 GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 234 (917)
T TIGR01116 155 GTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQ 234 (917)
T ss_pred CCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHH
Confidence 9999999999999999 00100 0
Q ss_pred c------------------------------------cccceecchhHHhhhcceeEEEecCccccccCchh-------H
Q 036987 225 L------------------------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------D 261 (478)
Q Consensus 225 ~------------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------~ 261 (478)
. ++|+++|+++++|+||++++||||||||||+|+|+ .
T Consensus 235 ~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~ 314 (917)
T TIGR01116 235 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALD 314 (917)
T ss_pred HHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecC
Confidence 0 89999999999999999999999999999999998 1
Q ss_pred --------------------------------------HHHHHHHHhccc------------ccCChhhHHHHHHcCCcc
Q 036987 262 --------------------------------------MVVLMAARASTL------------ENQVAIDGAIVSMLAGPK 291 (478)
Q Consensus 262 --------------------------------------~~l~~~~~~~~~------------~~~~p~~~ai~~~~~~~~ 291 (478)
.++..++.|+.. ..++|+|.|++.++.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 315 PSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred CcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcC
Confidence 011223333321 024899999998752210
Q ss_pred -------------------------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc------------
Q 036987 292 -------------------------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH------------ 334 (478)
Q Consensus 292 -------------------------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~------------ 334 (478)
..+++.+||+|++|||+++++. +++++.|+|||||.|+++|+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l 473 (917)
T TIGR01116 395 LPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPL 473 (917)
T ss_pred CCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeC
Confidence 1247889999999999999875 46688999999999999996
Q ss_pred -HHHHHHHHHHHHHHhh-ccceeeEEEeeecccccc------CCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH------
Q 036987 335 -KEIEKKVHGIIDKFAE-CGLRSLAVAWQVINLCRK------RGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS------ 400 (478)
Q Consensus 335 -~~~~~~~~~~~~~~~~-~G~r~l~~A~~~~~~~~~------~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~------ 400 (478)
++.++.+.+.+++|++ +|+||+++||+.++.++. ...++..|++|+|+|+++|+||||++++++|+
T Consensus 474 ~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aG 553 (917)
T TIGR01116 474 TDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAG 553 (917)
T ss_pred CHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCC
Confidence 1345678888999999 999999999999864321 11234568999999999999999999999999
Q ss_pred --------HhHHHHHHHHHHcCCCCCCc--cccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCE
Q 036987 401 --------DQIAIAKETGRKLGMGTNMY--LSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHI 470 (478)
Q Consensus 401 --------D~~~tA~~ia~~~Gi~~~~~--~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~ 470 (478)
|++.||.++|+++||...-. ....++|.+. ..++++++.+.+.+..||||++|+||.++|+.||+.|++
T Consensus 554 I~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~ 632 (917)
T TIGR01116 554 IRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEI 632 (917)
T ss_pred CEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCe
Confidence 99999999999999964210 1123445443 356777788888888999999999999999999999999
Q ss_pred EEEeCCCC
Q 036987 471 SGMTGDGT 478 (478)
Q Consensus 471 V~m~GDGv 478 (478)
|+|+|||+
T Consensus 633 va~iGDG~ 640 (917)
T TIGR01116 633 VAMTGDGV 640 (917)
T ss_pred EEEecCCc
Confidence 99999996
No 15
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-68 Score=565.61 Aligned_cols=428 Identities=23% Similarity=0.360 Sum_probs=347.2
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHH-HHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVI-IINSTTSFKE 116 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~ 116 (478)
|+..++.+|+..||+|.+..+.++.+..++++..+||+++..++.++|..-. +.||...++++ +.+.+.+.+|
T Consensus 161 L~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~------Y~~YA~cI~iisv~Si~~sv~e 234 (1140)
T KOG0208|consen 161 LERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQAFSVALWLADS------YYYYAFCIVIISVYSIVLSVYE 234 (1140)
T ss_pred ccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHHhHHhhhhhccc------chhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888888888877632 23333333333 7777888889
Q ss_pred HHHHHHHHHHhhcCe----EeeCCeEEEEeCCCCCcCcEEEEcC-CCeeeccEEEEecCcEEEeccccccccccccCCce
Q 036987 117 ENNAGNAAAALMAQS----YLRDGRWNEEDAAEMVPGDIISIKL-GEIVSADARLVEGDPLKIDRFQFCLWSALTGESLP 191 (478)
Q Consensus 117 ~~~~~~~~~~l~~~~----v~r~g~~~~i~~~~lv~GDiv~v~~-G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~p 191 (478)
.++..+.++++.+.. |+|||.|++|.++|||||||+.+.+ |-..|||++|++| +|.||| |+|||||+|
T Consensus 235 ~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE------smLTGESVP 307 (1140)
T KOG0208|consen 235 TRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE------SMLTGESVP 307 (1140)
T ss_pred HHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec------ccccCCccc
Confidence 888888888877655 9999999999999999999999998 8999999999999 899999 999999999
Q ss_pred eecCCC-------------------CeeeeccEEee------eeEEEEEEEe----ecccccc-----------------
Q 036987 192 VTKNPG-------------------DGVYSGSTCKQ------GEIAAVVIAN----CNGHLHL----------------- 225 (478)
Q Consensus 192 v~K~~~-------------------~~v~aGt~v~~------g~~~~~V~~t----~~g~~~~----------------- 225 (478)
|.|.+. +.+|+||.+++ +.+.++|++| ..|.+.+
T Consensus 308 v~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~ 387 (1140)
T KOG0208|consen 308 VTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSF 387 (1140)
T ss_pred ccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHH
Confidence 999873 57999999987 5688999999 3343322
Q ss_pred ---------------------------------------------------------------cccceecchhHHhhhcc
Q 036987 226 ---------------------------------------------------------------IQSAITKRMTAIEEMAG 242 (478)
Q Consensus 226 ---------------------------------------------------------------~~~ilvk~~~~~e~lg~ 242 (478)
|+||+|-+|..+...|+
T Consensus 388 ~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~ 467 (1140)
T KOG0208|consen 388 KFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGK 467 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecce
Confidence 99999999999999999
Q ss_pred eeEEEecCccccccCchh----------------------------------------HHHHHHHHHhcccc------cC
Q 036987 243 MDVLCSDKTGTLTLNKLT----------------------------------------DMVVLMAARASTLE------NQ 276 (478)
Q Consensus 243 v~~i~~DKTGTLT~~~~~----------------------------------------~~~l~~~~~~~~~~------~~ 276 (478)
+|++|||||||||++.+. ..+....+.|.... .+
T Consensus 468 i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~G 547 (1140)
T KOG0208|consen 468 LNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVG 547 (1140)
T ss_pred eeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeecc
Confidence 999999999999999988 01122222222111 13
Q ss_pred ChhhHHHHHHcCC------------------------cc--------------eeeeEeecCCCCCceEEEEEEeC-CCe
Q 036987 277 VAIDGAIVSMLAG------------------------PK--------------KARVHFLLFNPTDKRAAITYVDG-AGI 317 (478)
Q Consensus 277 ~p~~~ai~~~~~~------------------------~~--------------~~~~~~~~F~s~~k~~sv~~~~~-~g~ 317 (478)
+|+|.-+.+..+- +. ...++.+||+|..+||||++..+ +.+
T Consensus 548 DPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~ 627 (1140)
T KOG0208|consen 548 DPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDK 627 (1140)
T ss_pred CceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCc
Confidence 6776655443210 00 01178999999999999999853 457
Q ss_pred EEEEEeCcHHHHHHhcc-HHHHHHHHHHHHHHhhccceeeEEEeeeccccc----cCCCCCCCCCCcEEEEEeecCCCCC
Q 036987 318 MHRVSKGAPEQILHLAH-KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCR----KRGTKDNPGGPWEFVGLLPLFDPPH 392 (478)
Q Consensus 318 ~~~~~KGa~e~i~~~c~-~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~----~~~~~~~~e~~l~~lG~i~~~D~lR 392 (478)
.++|+|||||.|.++|. +.+|.++++.++.|+.+|+|+||+|+|+++... ....|+..|++|+|+|++.|+++||
T Consensus 628 ~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK 707 (1140)
T KOG0208|consen 628 MMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLK 707 (1140)
T ss_pred eEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccc
Confidence 78999999999999998 567999999999999999999999999998651 1257899999999999999999999
Q ss_pred cCcHHHHH--------------HhHHHHHHHHHHcCCCCCCc-------c---c--------------------------
Q 036987 393 HDSAETIS--------------DQIAIAKETGRKLGMGTNMY-------L---S-------------------------- 422 (478)
Q Consensus 393 ~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~-------~---~-------------------------- 422 (478)
++++.+|+ ||..||+.+||+|||...-. . .
T Consensus 708 ~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~ 787 (1140)
T KOG0208|consen 708 EETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPD 787 (1140)
T ss_pred cccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcc
Confidence 99999999 99999999999999954100 0 0
Q ss_pred --------c---------ccccccccc--cCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 423 --------S---------SLLRESKDE--TNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 423 --------~---------~~~g~~~~~--~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
+ +++|....- ....+.+.+++.+.+|||||+|.||..+|+.||+.|+.|+|||||.
T Consensus 788 ~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGA 862 (1140)
T KOG0208|consen 788 LASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGA 862 (1140)
T ss_pred ccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCc
Confidence 0 001111110 1134456777788999999999999999999999999999999994
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1e-63 Score=570.14 Aligned_cols=423 Identities=18% Similarity=0.210 Sum_probs=338.4
Q ss_pred cCCCccCCCCchHH----HHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036987 50 FGYNRLEGKKESKI----LKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNAAA 125 (478)
Q Consensus 50 ~G~N~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 125 (478)
|.+|.+...|+++| +.|++||++|+|++|++.++++++....+..+..+..+++++++++.+.+++++++++++.+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 67899999998876 78899999999999999999999976544444566666666668999999999999999999
Q ss_pred HhhcCe--EeeC-CeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCc----EEEeccccccccccccCCceeecCCC-
Q 036987 126 ALMAQS--YLRD-GRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDP----LKIDRFQFCLWSALTGESLPVTKNPG- 197 (478)
Q Consensus 126 ~l~~~~--v~r~-g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~----~~vde~~~~~~S~LTGEs~pv~K~~~- 197 (478)
+.++.. |+|+ |+++++++++|+|||+|.|++||.||||++|+++++ +.||| |.|||||.|+.|.+.
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~------s~l~GEs~~~~k~~~~ 154 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVET------ANLDGETNLKLRQALE 154 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEe------eccCCeecceEeecch
Confidence 988776 9997 899999999999999999999999999999998543 99999 999999999998641
Q ss_pred -----------------------------------------------CeeeeccEEee-eeEEEEEEEe-----------
Q 036987 198 -----------------------------------------------DGVYSGSTCKQ-GEIAAVVIAN----------- 218 (478)
Q Consensus 198 -----------------------------------------------~~v~aGt~v~~-g~~~~~V~~t----------- 218 (478)
+.+|.||.+.+ |++.++|++|
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~ 234 (1057)
T TIGR01652 155 ETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT 234 (1057)
T ss_pred hhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC
Confidence 45788888888 8999999999
Q ss_pred -------------------------------------ecc---c----cc--------------c---------------
Q 036987 219 -------------------------------------CNG---H----LH--------------L--------------- 225 (478)
Q Consensus 219 -------------------------------------~~g---~----~~--------------~--------------- 225 (478)
..+ . +. .
T Consensus 235 ~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 235 QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhccee
Confidence 000 0 00 0
Q ss_pred -----------------------c----ccceecchhHHhhhcceeEEEecCccccccCchh---------------H--
Q 036987 226 -----------------------I----QSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT---------------D-- 261 (478)
Q Consensus 226 -----------------------~----~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~---------------~-- 261 (478)
+ .+++||+.+++|+||++++||+|||||||+|+|+ .
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 2 4699999999999999999999999999999998 0
Q ss_pred -----------------------------------------------HHHHHHHHhccc--------------ccCChhh
Q 036987 262 -----------------------------------------------MVVLMAARASTL--------------ENQVAID 280 (478)
Q Consensus 262 -----------------------------------------------~~l~~~~~~~~~--------------~~~~p~~ 280 (478)
+++..++.|+.. ..++|.|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E 474 (1057)
T TIGR01652 395 KDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDE 474 (1057)
T ss_pred HHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcH
Confidence 011112222210 0247999
Q ss_pred HHHHHHcCCc-----------------------ceeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc---
Q 036987 281 GAIVSMLAGP-----------------------KKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH--- 334 (478)
Q Consensus 281 ~ai~~~~~~~-----------------------~~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~--- 334 (478)
.|++.++... ....++.+||+|++|||+++++.+++++++|+|||||.|+++|.
T Consensus 475 ~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~ 554 (1057)
T TIGR01652 475 AALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGG 554 (1057)
T ss_pred HHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccc
Confidence 9999875221 01237789999999999999998778889999999999999997
Q ss_pred HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCC---------------------CCCCCCCCcEEEEEeecCCCCCc
Q 036987 335 KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRG---------------------TKDNPGGPWEFVGLLPLFDPPHH 393 (478)
Q Consensus 335 ~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~---------------------~~~~~e~~l~~lG~i~~~D~lR~ 393 (478)
+..++.+.+.+++|+.+|+|++++|+|.++.++.+. ..+.+|++|+|+|+++++||||+
T Consensus 555 ~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~ 634 (1057)
T TIGR01652 555 NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQE 634 (1057)
T ss_pred hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhh
Confidence 235677889999999999999999999987543210 12456899999999999999999
Q ss_pred CcHHHHH--------------HhHHHHHHHHHHcCCCCCCcc-----c--------------------------------
Q 036987 394 DSAETIS--------------DQIAIAKETGRKLGMGTNMYL-----S-------------------------------- 422 (478)
Q Consensus 394 ~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~-----~-------------------------------- 422 (478)
+++++|+ |+++||++||++|||.+.-.. +
T Consensus 635 ~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 714 (1057)
T TIGR01652 635 GVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGN 714 (1057)
T ss_pred ccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCc
Confidence 9999999 999999999999999653110 0
Q ss_pred --cccccccccccCCc---chHHHHhhcCC--EEEecChHHHHHHHHHHHhC-CCEEEEeCCCC
Q 036987 423 --SSLLRESKDETNSA---LPIDELIEKAD--GFAGLFPEHKYEIVRRLHDR-KHISGMTGDGT 478 (478)
Q Consensus 423 --~~~~g~~~~~~~~~---~~~~~~l~~~~--v~ar~~Pe~K~~iV~~lq~~-g~~V~m~GDGv 478 (478)
-.++|...+..++. +.+.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+
T Consensus 715 ~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ 778 (1057)
T TIGR01652 715 VALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGA 778 (1057)
T ss_pred eEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 02333322212221 23444555665 99999999999999999998 99999999996
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.9e-63 Score=532.43 Aligned_cols=352 Identities=25% Similarity=0.331 Sum_probs=291.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCC----CC---CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe------
Q 036987 67 LGCMCNPLSWVMEAAAIMAIALAHGG----GK---DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS------ 131 (478)
Q Consensus 67 ~~~~~~~~~~~l~~~~~~~~~~~~~~----~~---~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~------ 131 (478)
..||++|+.++++++++++++++... +. ...|...+++++ ++..+.+.+++++.+++.++|+++.
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 45899999999999999999987421 11 122333333333 5555667788999998888888753
Q ss_pred EeeCCe-EEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCCe---eeeccEEe
Q 036987 132 YLRDGR-WNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDG---VYSGSTCK 207 (478)
Q Consensus 132 v~r~g~-~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~---v~aGt~v~ 207 (478)
|+|||+ +++|++++|+|||+|.|++||+||+||+|++| .+.||| |+|||||.|+.|.+|+. +|+||.|.
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDE------SaLTGES~PV~K~~G~~~~~V~aGT~v~ 180 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDE------SAITGESAPVIRESGGDFSSVTGGTRVL 180 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEc------ccccCCCCceEeCCCCccCeEEeceEEE
Confidence 899988 89999999999999999999999999999999 799999 99999999999999987 99999999
Q ss_pred eeeEEEEEEEe----ecccccc----------------------------------------------------------
Q 036987 208 QGEIAAVVIAN----CNGHLHL---------------------------------------------------------- 225 (478)
Q Consensus 208 ~g~~~~~V~~t----~~g~~~~---------------------------------------------------------- 225 (478)
+|.+.++|+++ ..|++..
T Consensus 181 ~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~ai 260 (679)
T PRK01122 181 SDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLI 260 (679)
T ss_pred eeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcc
Confidence 99999999998 1111000
Q ss_pred --------------------cccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhccc
Q 036987 226 --------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARASTL 273 (478)
Q Consensus 226 --------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~ 273 (478)
++|+++|+++++|+||++++||||||||||+|+|. ++++..++.++..
T Consensus 261 P~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 261 PTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLA 340 (679)
T ss_pred cchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999988 3466777777766
Q ss_pred ccCChhhHHHHHHcCCc-c--e-----eeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccH---HHHHHHH
Q 036987 274 ENQVAIDGAIVSMLAGP-K--K-----ARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK---EIEKKVH 342 (478)
Q Consensus 274 ~~~~p~~~ai~~~~~~~-~--~-----~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~---~~~~~~~ 342 (478)
++ ||.++|++.++... . . ...+.+||++.+++|++.+ +| ..|.||+||.+++.|.+ ..++++.
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 65 99999999886431 1 1 1256789999988887654 34 57899999999999952 2456788
Q ss_pred HHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHH
Q 036987 343 GIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKE 408 (478)
Q Consensus 343 ~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ 408 (478)
+.+++++++|+|++++|++. +++|+++|+||+|||++++|+ |++.||.+
T Consensus 415 ~~~~~~a~~G~~~l~va~~~-----------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~a 477 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAEDN-----------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA 477 (679)
T ss_pred HHHHHHHhCCCcEEEEEECC-----------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 88899999999999999765 899999999999999999999 56666666
Q ss_pred HHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 409 TGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 409 ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
||+++|| .++|||++||||+++|+.+|++|++|+|||||+
T Consensus 478 IA~elGI------------------------------d~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGv 517 (679)
T PRK01122 478 IAAEAGV------------------------------DDFLAEATPEDKLALIRQEQAEGRLVAMTGDGT 517 (679)
T ss_pred HHHHcCC------------------------------cEEEccCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 6666665 347999999999999999999999999999996
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.8e-63 Score=533.09 Aligned_cols=366 Identities=23% Similarity=0.336 Sum_probs=285.8
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCCC-----CCCchhHHH-HHHHHHHHHHHHHH----HHHHHHHHHHhhcCe-----
Q 036987 67 LGCMCNPLSWVMEAAAIMAIALAHGGG-----KDPDYHDFI-GIVIIINSTTSFKE----ENNAGNAAAALMAQS----- 131 (478)
Q Consensus 67 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~-~i~~~~~~~~~~~~----~~~~~~~~~~l~~~~----- 131 (478)
..+|++|+.|+++++++++++++.... ..+.|+..+ .++++++.++..++ +++++++.+.|+++.
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 347899999999999999998764211 111122222 22225555555555 788888888888653
Q ss_pred --EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCC---CeeeeccEE
Q 036987 132 --YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPG---DGVYSGSTC 206 (478)
Q Consensus 132 --v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~---~~v~aGt~v 206 (478)
|+|||++++|++++|+|||+|.|++||+|||||+|++| ...||| |+|||||.|+.|++| +.+|+||.|
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDE------SaLTGES~PV~K~~g~d~~~V~aGT~v 179 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDE------SAITGESAPVIKESGGDFDNVIGGTSV 179 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEec------chhcCCCCceeccCCCccCeeecCcee
Confidence 67899999999999999999999999999999999999 789999 999999999999999 889999999
Q ss_pred eeeeEEEEEEEe----ecccccc---------------------------------------------------------
Q 036987 207 KQGEIAAVVIAN----CNGHLHL--------------------------------------------------------- 225 (478)
Q Consensus 207 ~~g~~~~~V~~t----~~g~~~~--------------------------------------------------------- 225 (478)
.+|++.++|+++ ..|++.+
T Consensus 180 ~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~~~~~~~~~~~~~~~~~~~val~V~~ 259 (673)
T PRK14010 180 ASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCL 259 (673)
T ss_pred ecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHh
Confidence 999999999999 1111000
Q ss_pred ---------------------cccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhcc
Q 036987 226 ---------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARAST 272 (478)
Q Consensus 226 ---------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~ 272 (478)
++|+++|+++++|+||++|++|||||||||+|++. ++++..++.++.
T Consensus 260 IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 260 IPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSI 339 (673)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999997654 346666666665
Q ss_pred cccCChhhHHHHHHcCCcc----eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccH---HHHHHHHHHH
Q 036987 273 LENQVAIDGAIVSMLAGPK----KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK---EIEKKVHGII 345 (478)
Q Consensus 273 ~~~~~p~~~ai~~~~~~~~----~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~---~~~~~~~~~~ 345 (478)
.++ ||+++|++.++.... ....+..||++++++|++.+ +|+ .+.||||+.++++|.. ..+.++.+..
T Consensus 340 ~s~-~P~~~AIv~~a~~~~~~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADD-TPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCC-ChHHHHHHHHHHHcCCCchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 555 999999999875321 11245689999999999864 343 5669999999999962 2234567777
Q ss_pred HHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCcccccc
Q 036987 346 DKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSL 425 (478)
Q Consensus 346 ~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~ 425 (478)
++++++|+|+++++.+. +++|+++|+||+|||++++|+.. |+.||...|+|||..
T Consensus 414 ~~~a~~G~~~l~v~~~~-----------------~~lG~i~l~Dp~R~~a~e~I~~L--------r~~GI~vvMiTGDn~ 468 (673)
T PRK14010 414 KGVSKKGGTPLVVLEDN-----------------EILGVIYLKDVIKDGLVERFREL--------REMGIETVMCTGDNE 468 (673)
T ss_pred HHHHhCCCeEEEEEECC-----------------EEEEEEEeecCCcHHHHHHHHHH--------HHCCCeEEEECCCCH
Confidence 88999999999987543 89999999999999999999932 444444444443221
Q ss_pred ccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 426 LRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 426 ~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.+...+++.++..++|||++||||.++|+.||++|++|+|||||+
T Consensus 469 --------~TA~aIA~elGI~~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGv 513 (673)
T PRK14010 469 --------LTAATIAKEAGVDRFVAECKPEDKINVIREEQAKGHIVAMTGDGT 513 (673)
T ss_pred --------HHHHHHHHHcCCceEEcCCCHHHHHHHHHHHHhCCCEEEEECCCh
Confidence 123334444444457999999999999999999999999999996
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-64 Score=521.16 Aligned_cols=453 Identities=25% Similarity=0.326 Sum_probs=375.8
Q ss_pred cccccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCC
Q 036987 19 HQQVLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAHGG 92 (478)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 92 (478)
..++.|.+|++++++++++ ||.+++.+++.+.|+|.+++|+ .+.|.+|++|+++.+.+++|++++++|+.+...
T Consensus 35 ~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~ 114 (1019)
T KOG0203|consen 35 VSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQ 114 (1019)
T ss_pred eeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhh
Confidence 3568999999999999998 9999999999999999999987 678999999999999999999999999866411
Q ss_pred -----CC-CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCe
Q 036987 93 -----GK-DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEI 159 (478)
Q Consensus 93 -----~~-~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~ 159 (478)
.. ....+.++++.. +++.+..++|+.+..+.++.++++. |+|||....+.++|||+||+|.++-|++
T Consensus 115 ~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gdr 194 (1019)
T KOG0203|consen 115 ASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDR 194 (1019)
T ss_pred cccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCc
Confidence 11 112222222222 7777899999999999999999887 9999999999999999999999999999
Q ss_pred eeccEEEEecCcEEEeccccccccccccCCceeecCCC----------CeeeeccEEeeeeEEEEEEEe----ecccccc
Q 036987 160 VSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPG----------DGVYSGSTCKQGEIAAVVIAN----CNGHLHL 225 (478)
Q Consensus 160 IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~----------~~v~aGt~v~~g~~~~~V~~t----~~g~~~~ 225 (478)
||||.+++++..+++|+ |+|||||.|....+. ++.|.+|.+++|.+.++|++| .+|+++.
T Consensus 195 VPADiRiis~~g~~vdn------sslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~ 268 (1019)
T KOG0203|consen 195 VPADIRIISATGCKVDN------SSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIAS 268 (1019)
T ss_pred ccceeEEEEecceeEec------cccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhh
Confidence 99999999999999999 999999999999773 689999999999999999999 2222211
Q ss_pred --------------------------------------------------------------------------------
Q 036987 226 -------------------------------------------------------------------------------- 225 (478)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (478)
T Consensus 269 l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa 348 (1019)
T KOG0203|consen 269 LASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMA 348 (1019)
T ss_pred hhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHh
Confidence
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh-------------------------------HHHHHHHHHhccc-
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------------------------------DMVVLMAARASTL- 273 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------------------------------~~~l~~~~~~~~~- 273 (478)
++++++|+++++|+||+.++||+|||||||+|+|+ ..++.++..|+..
T Consensus 349 ~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~ 428 (1019)
T KOG0203|consen 349 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAV 428 (1019)
T ss_pred hceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcce
Confidence 99999999999999999999999999999999999 2344555555432
Q ss_pred --------------ccCChhhHHHHHHcCCc----c-----eeeeEeecCCCCCceEEEEEEeCC---CeEEEEEeCcHH
Q 036987 274 --------------ENQVAIDGAIVSMLAGP----K-----KARVHFLLFNPTDKRAAITYVDGA---GIMHRVSKGAPE 327 (478)
Q Consensus 274 --------------~~~~p~~~ai~~~~~~~----~-----~~~~~~~~F~s~~k~~sv~~~~~~---g~~~~~~KGa~e 327 (478)
..+++.+.|++++..-. . ...+...||+|.+|+.-.+....+ .++...+|||||
T Consensus 429 ~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape 508 (1019)
T KOG0203|consen 429 FKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPE 508 (1019)
T ss_pred ecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChH
Confidence 12478899999886311 1 123778999999999877766433 467788999999
Q ss_pred HHHHhcc------------HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCC-------CCCCCCCCcEEEEEeecC
Q 036987 328 QILHLAH------------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRG-------TKDNPGGPWEFVGLLPLF 388 (478)
Q Consensus 328 ~i~~~c~------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~-------~~~~~e~~l~~lG~i~~~ 388 (478)
.++++|+ ....+.+++...++...|.||++||++.++..+... .-.-...+|.|+|++++.
T Consensus 509 ~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~i 588 (1019)
T KOG0203|consen 509 RILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMI 588 (1019)
T ss_pred HHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhcc
Confidence 9999999 466788889999999999999999999988654432 123345689999999999
Q ss_pred CCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCC-Cccc---------------------cccccccccc
Q 036987 389 DPPHHDSAETIS--------------DQIAIAKETGRKLGMGTN-MYLS---------------------SSLLRESKDE 432 (478)
Q Consensus 389 D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~-~~~~---------------------~~~~g~~~~~ 432 (478)
||||..+|+++. |++-||+++|+..||... ..+. ..+.|.+ ..
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~e-L~ 667 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSE-LP 667 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccc-cc
Confidence 999999999999 999999999999997431 0000 0123333 33
Q ss_pred cCCcchHHHHhhcCC--EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 433 TNSALPIDELIEKAD--GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 433 ~~~~~~~~~~l~~~~--v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.|+.+++++++.+.. ||||.||+||+.||+..|++|.+|+++||||
T Consensus 668 ~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGV 715 (1019)
T KOG0203|consen 668 DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 715 (1019)
T ss_pred ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCc
Confidence 688999999997765 9999999999999999999999999999997
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=8.3e-61 Score=513.39 Aligned_cols=367 Identities=25% Similarity=0.326 Sum_probs=295.5
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHhcC----C--CCCCchhHHHH---HHH--HHHHHHHHHHHHHHHHHHHHhhcCe----
Q 036987 67 LGCMCNPLSWVMEAAAIMAIALAHG----G--GKDPDYHDFIG---IVI--IINSTTSFKEENNAGNAAAALMAQS---- 131 (478)
Q Consensus 67 ~~~~~~~~~~~l~~~~~~~~~~~~~----~--~~~~~~~~~~~---i~~--~~~~~~~~~~~~~~~~~~~~l~~~~---- 131 (478)
..||+||+.++++++++++++++.. . +....|++..+ +++ ++..+.+.+++++.+++.++|++..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 4589999999999999999998652 1 11134776432 221 5556667788889999998888754
Q ss_pred --Eee-CCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCCe---eeeccE
Q 036987 132 --YLR-DGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDG---VYSGST 205 (478)
Q Consensus 132 --v~r-~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~---v~aGt~ 205 (478)
|+| ||++++|++++|+|||+|.|++||+||+||+|++| .+.||| |+|||||.||.|++|+. +|+||.
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDE------SaLTGES~PV~K~~g~~~~~V~aGT~ 179 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDE------SAITGESAPVIKESGGDFASVTGGTR 179 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEc------ccccCCCCceeecCCCCcceeecCcE
Confidence 665 89999999999999999999999999999999999 899999 99999999999999874 999999
Q ss_pred EeeeeEEEEEEEee----cccccc--------------------------------------------------------
Q 036987 206 CKQGEIAAVVIANC----NGHLHL-------------------------------------------------------- 225 (478)
Q Consensus 206 v~~g~~~~~V~~t~----~g~~~~-------------------------------------------------------- 225 (478)
|.+|++.++|+++. .|++..
T Consensus 180 v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~~~~~~~~lvallV~ 259 (675)
T TIGR01497 180 ILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVC 259 (675)
T ss_pred EEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Confidence 99999999999991 111000
Q ss_pred ----------------------cccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhc
Q 036987 226 ----------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARAS 271 (478)
Q Consensus 226 ----------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~ 271 (478)
++|+++|+++++|+||++|+||||||||||+|+|+ ++++..++.++
T Consensus 260 aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~ 339 (675)
T TIGR01497 260 LIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLAS 339 (675)
T ss_pred hCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999998 35677777777
Q ss_pred ccccCChhhHHHHHHcCCcc-------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccH---HHHHHH
Q 036987 272 TLENQVAIDGAIVSMLAGPK-------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHK---EIEKKV 341 (478)
Q Consensus 272 ~~~~~~p~~~ai~~~~~~~~-------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~---~~~~~~ 341 (478)
..++ ||.++|++.++.... ....+..||++.++++++.+. +| ..+.||+||.+++.|.. ..+.++
T Consensus 340 ~~s~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~ 414 (675)
T TIGR01497 340 LADD-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDL 414 (675)
T ss_pred CCCC-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHH
Confidence 6665 999999998764221 112567899999887776443 45 57899999999988851 235677
Q ss_pred HHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCcc
Q 036987 342 HGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYL 421 (478)
Q Consensus 342 ~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~ 421 (478)
.+.+++++++|+|++++|++. +++|+++|.||+|||++++|+.. ++.|+...|+|
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~-----------------~~lG~i~l~D~~Rp~a~eaI~~l--------~~~Gi~v~miT 469 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDN-----------------RIYGVIYLKDIVKGGIKERFAQL--------RKMGIKTIMIT 469 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECC-----------------EEEEEEEecccchhHHHHHHHHH--------HHCCCEEEEEc
Confidence 888899999999999999865 89999999999999999999833 45555544444
Q ss_pred ccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 422 SSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 422 ~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
|+.. .....+++.++..++|||++|+||.++|+.+|++|+.|+|+|||+
T Consensus 470 GD~~--------~ta~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~ 518 (675)
T TIGR01497 470 GDNR--------LTAAAIAAEAGVDDFIAEATPEDKIALIRQEQAEGKLVAMTGDGT 518 (675)
T ss_pred CCCH--------HHHHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 4221 133444444444467999999999999999999999999999996
No 21
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-61 Score=497.69 Aligned_cols=438 Identities=21% Similarity=0.260 Sum_probs=344.8
Q ss_pred CCHHHHHHHcCC---CC-HHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHH
Q 036987 26 IPIEEVFENLKC---LT-SDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDF 101 (478)
Q Consensus 26 ~~~~~~~~~l~~---Ls-~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 101 (478)
.+.++....++. +. +.+++....+||.|....+.|.+...|.+.-..||+.+..++..+|.+= .+|+..
T Consensus 148 fp~~~~~g~~~k~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLD-------eyWYyS 220 (1160)
T KOG0209|consen 148 FPTDEPFGYFQKSTGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLD-------EYWYYS 220 (1160)
T ss_pred cCcCCcchhhhhccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhH-------HHHHHH
Confidence 345554444433 44 3455555566999999999999999999999999988888888887762 477766
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe----EeeCCeEEEEeCCCCCcCcEEEEcC---CCeeeccEEEEecCcE
Q 036987 102 IGIVI--IINSTTSFKEENNAGNAAAALMAQS----YLRDGRWNEEDAAEMVPGDIISIKL---GEIVSADARLVEGDPL 172 (478)
Q Consensus 102 ~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~----v~r~g~~~~i~~~~lv~GDiv~v~~---G~~IPaD~~vl~g~~~ 172 (478)
++.++ +..-+.-..|+.+.-+.++++.+.. |+|+++|+.+.++||.|||+|.|.. ...||||.+++.| .|
T Consensus 221 lFtLfMli~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sc 299 (1160)
T KOG0209|consen 221 LFTLFMLIAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SC 299 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-ce
Confidence 66555 2222333445555544455544433 9999999999999999999999987 5789999999999 89
Q ss_pred EEeccccccccccccCCceeecCCC-----------------CeeeeccEEee-------------eeEEEEEEEe----
Q 036987 173 KIDRFQFCLWSALTGESLPVTKNPG-----------------DGVYSGSTCKQ-------------GEIAAVVIAN---- 218 (478)
Q Consensus 173 ~vde~~~~~~S~LTGEs~pv~K~~~-----------------~~v~aGt~v~~-------------g~~~~~V~~t---- 218 (478)
.||| |+|||||.|..|.+- +.+|+||.+++ |-+.+.|++|
T Consensus 300 iVnE------aMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeT 373 (1160)
T KOG0209|consen 300 IVNE------AMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFET 373 (1160)
T ss_pred eech------hhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccc
Confidence 9999 999999999999862 47999999986 5588999999
Q ss_pred ecccccc-------------------------------------------------------------------------
Q 036987 219 CNGHLHL------------------------------------------------------------------------- 225 (478)
Q Consensus 219 ~~g~~~~------------------------------------------------------------------------- 225 (478)
..|++.+
T Consensus 374 SQGkLvRtilf~aervTaNn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAV 453 (1160)
T KOG0209|consen 374 SQGKLVRTILFSAERVTANNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAV 453 (1160)
T ss_pred cCCceeeeEEecceeeeeccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHH
Confidence 3333322
Q ss_pred --------cccceecchhHHhhhcceeEEEecCccccccCchh----------------------HH--HHHHHHHhccc
Q 036987 226 --------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT----------------------DM--VVLMAARASTL 273 (478)
Q Consensus 226 --------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~----------------------~~--~l~~~~~~~~~ 273 (478)
|.++.|..|-.+.-+|++|+.|||||||||+..|. +. ++..++++-..
T Consensus 454 NsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~l 533 (1160)
T KOG0209|consen 454 NSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLL 533 (1160)
T ss_pred HHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998 11 22223222222
Q ss_pred c---cCChhhHHHHHHcCCcce---------------eeeEeecCCCCCceEEEEEEeC----CCeEEEEEeCcHHHHHH
Q 036987 274 E---NQVAIDGAIVSMLAGPKK---------------ARVHFLLFNPTDKRAAITYVDG----AGIMHRVSKGAPEQILH 331 (478)
Q Consensus 274 ~---~~~p~~~ai~~~~~~~~~---------------~~~~~~~F~s~~k~~sv~~~~~----~g~~~~~~KGa~e~i~~ 331 (478)
. -+||+++|.++.++-..+ ...+++.|+|..|||+++..-. +-+++..+|||||.|.+
T Consensus 534 e~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ 613 (1160)
T KOG0209|consen 534 EDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQE 613 (1160)
T ss_pred cCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHH
Confidence 2 259999999998742111 1167899999999999987631 23688999999999998
Q ss_pred hccHHHHHHHHHHHHHHhhccceeeEEEeeeccc----cccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHH-------
Q 036987 332 LAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINL----CRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETIS------- 400 (478)
Q Consensus 332 ~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~----~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~------- 400 (478)
+.. +.|.++.+...+|+++|.||+|++||.++. +..+..|+..|++|+|.|++.|.-|+|+|++++|+
T Consensus 614 ml~-dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH 692 (1160)
T KOG0209|consen 614 MLR-DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSH 692 (1160)
T ss_pred HHH-hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCc
Confidence 884 889999999999999999999999999882 22345789999999999999999999999999999
Q ss_pred -------HhHHHHHHHHHHcCCCCCCcc---------c------------------------------cccccccccccC
Q 036987 401 -------DQIAIAKETGRKLGMGTNMYL---------S------------------------------SSLLRESKDETN 434 (478)
Q Consensus 401 -------D~~~tA~~ia~~~Gi~~~~~~---------~------------------------------~~~~g~~~~~~~ 434 (478)
||+.||.++|+++||...... + -+++|+..+...
T Consensus 693 ~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~ 772 (1160)
T KOG0209|consen 693 RVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQ 772 (1160)
T ss_pred eEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHh
Confidence 999999999999999532000 0 012344433333
Q ss_pred CcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 435 SALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 435 ~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
..+.+.+++....||||+.|.||..+|..|++.|+.++|||||+
T Consensus 773 ~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGT 816 (1160)
T KOG0209|consen 773 ATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGT 816 (1160)
T ss_pred hhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCC
Confidence 44567778888999999999999999999999999999999996
No 22
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.7e-59 Score=529.60 Aligned_cols=425 Identities=18% Similarity=0.154 Sum_probs=331.8
Q ss_pred HhcCCCccCCCCchHH----HHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036987 48 NLFGYNRLEGKKESKI----LKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAGNA 123 (478)
Q Consensus 48 ~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 123 (478)
.+|..|.+.+.||+.| +.+++||+.+.|++|++.+++.++.......+..++.+++++++++++.+++++++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~ 164 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRS 164 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3699999999998876 678999999999999999999998765444344555666777789999999999999999
Q ss_pred HHHhhcCe--EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecC----cEEEeccccccccccccCCceeecCCC
Q 036987 124 AAALMAQS--YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGD----PLKIDRFQFCLWSALTGESLPVTKNPG 197 (478)
Q Consensus 124 ~~~l~~~~--v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~----~~~vde~~~~~~S~LTGEs~pv~K~~~ 197 (478)
.++.++.. |+|+|.++++++++|+|||+|.|++||.||||++|++++ .+.||+ |+|||||.|+.|.++
T Consensus 165 d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdt------s~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 165 DRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQT------INLDGESNLKTRYAK 238 (1178)
T ss_pred HHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEc------cccCCeeeeeEeccc
Confidence 99988777 999999999999999999999999999999999999843 599999 999999999999753
Q ss_pred ---------------------------------------------CeeeeccEEeee-eEEEEEEEe-------------
Q 036987 198 ---------------------------------------------DGVYSGSTCKQG-EIAAVVIAN------------- 218 (478)
Q Consensus 198 ---------------------------------------------~~v~aGt~v~~g-~~~~~V~~t------------- 218 (478)
+.++.|+.+.+. .+.++|+.|
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~ 318 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGA 318 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCC
Confidence 123334444332 588899998
Q ss_pred -------------------------------------eccc-------------------------------ccc-----
Q 036987 219 -------------------------------------CNGH-------------------------------LHL----- 225 (478)
Q Consensus 219 -------------------------------------~~g~-------------------------------~~~----- 225 (478)
..+. +..
T Consensus 319 ~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l 398 (1178)
T PLN03190 319 PSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSV 398 (1178)
T ss_pred CCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHH
Confidence 0000 000
Q ss_pred -------------------------------------cccceecchhHHhhhcceeEEEecCccccccCchh--------
Q 036987 226 -------------------------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------- 260 (478)
Q Consensus 226 -------------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------- 260 (478)
...+.||+.+..|+||+|++||+|||||||+|+|.
T Consensus 399 il~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g 478 (1178)
T PLN03190 399 IVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWG 478 (1178)
T ss_pred HHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECC
Confidence 12477999999999999999999999999999998
Q ss_pred -----HH-------------------------------------------------HHHHHHHhccc-------------
Q 036987 261 -----DM-------------------------------------------------VVLMAARASTL------------- 273 (478)
Q Consensus 261 -----~~-------------------------------------------------~l~~~~~~~~~------------- 273 (478)
.. ++...+.|...
T Consensus 479 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~ 558 (1178)
T PLN03190 479 VDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTV 558 (1178)
T ss_pred EEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccc
Confidence 00 11112222211
Q ss_pred -----ccCChhhHHHHHHcCCcc---------------------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHH
Q 036987 274 -----ENQVAIDGAIVSMLAGPK---------------------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPE 327 (478)
Q Consensus 274 -----~~~~p~~~ai~~~~~~~~---------------------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e 327 (478)
...+|.|.|++.++...+ ...++.+||+|++|||+++++.+++++++|+||||+
T Consensus 559 ~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e 638 (1178)
T PLN03190 559 KLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADT 638 (1178)
T ss_pred cceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcH
Confidence 112699999998763221 022789999999999999998777888999999999
Q ss_pred HHHHhcc----HHHHHHHHHHHHHHhhccceeeEEEeeeccccccC---------------------CCCCCCCCCcEEE
Q 036987 328 QILHLAH----KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKR---------------------GTKDNPGGPWEFV 382 (478)
Q Consensus 328 ~i~~~c~----~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~---------------------~~~~~~e~~l~~l 382 (478)
.|+++|. ...++.+.+.+++|+++|+|||++|||.++.++.+ ...+.+|++|+++
T Consensus 639 ~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~l 718 (1178)
T PLN03190 639 SMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTIL 718 (1178)
T ss_pred HHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEE
Confidence 9999996 24567788999999999999999999999754321 0124578999999
Q ss_pred EEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCcc-----c---------------------
Q 036987 383 GLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYL-----S--------------------- 422 (478)
Q Consensus 383 G~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~-----~--------------------- 422 (478)
|+++++||||++++++|+ |+.+||++||++|||.+.-.. .
T Consensus 719 G~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~ 798 (1178)
T PLN03190 719 GASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLT 798 (1178)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhcc
Confidence 999999999999999999 999999999999999653110 0
Q ss_pred ---------------------cccccccccccCC---cchHHHHhhcCC--EEEecChHHHHHHHHHHHhC-CCEEEEeC
Q 036987 423 ---------------------SSLLRESKDETNS---ALPIDELIEKAD--GFAGLFPEHKYEIVRRLHDR-KHISGMTG 475 (478)
Q Consensus 423 ---------------------~~~~g~~~~~~~~---~~~~~~~l~~~~--v~ar~~Pe~K~~iV~~lq~~-g~~V~m~G 475 (478)
..++|......++ .+.+.+++.+++ ||||++|+||+++|+.+|+. +++|+|+|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIG 878 (1178)
T PLN03190 799 TVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIG 878 (1178)
T ss_pred ccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 0111211111111 134556666666 69999999999999999997 58999999
Q ss_pred CCC
Q 036987 476 DGT 478 (478)
Q Consensus 476 DGv 478 (478)
||+
T Consensus 879 DGa 881 (1178)
T PLN03190 879 DGA 881 (1178)
T ss_pred CCc
Confidence 995
No 23
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-53 Score=459.19 Aligned_cols=333 Identities=28% Similarity=0.365 Sum_probs=270.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCe--------Eee-CCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEE
Q 036987 97 DYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQS--------YLR-DGRWNEEDAAEMVPGDIISIKLGEIVSADARLV 167 (478)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~--------v~r-~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl 167 (478)
.||+...+++++..+.++++.+...|+.+.+..+. +++ ||++++|++++|+|||+|.|+|||+||+||+|+
T Consensus 172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 56677777777888999999987777655555443 444 566999999999999999999999999999999
Q ss_pred ecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEee----cc--------------cccc----
Q 036987 168 EGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANC----NG--------------HLHL---- 225 (478)
Q Consensus 168 ~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t~----~g--------------~~~~---- 225 (478)
+| ...+|| |+|||||.|+.|.+|+.||+||.|.+|...++|+++. ++ .+++
T Consensus 252 ~G-~s~vDe------S~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr 324 (713)
T COG2217 252 SG-SSSVDE------SMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADR 324 (713)
T ss_pred eC-cEEeec------chhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHH
Confidence 99 899999 9999999999999999999999999999999999981 00 0111
Q ss_pred ---------------------------------------------------------------cccceecchhHHhhhcc
Q 036987 226 ---------------------------------------------------------------IQSAITKRMTAIEEMAG 242 (478)
Q Consensus 226 ---------------------------------------------------------------~~~ilvk~~~~~e~lg~ 242 (478)
++||++|+.+++|.+++
T Consensus 325 ~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~ 404 (713)
T COG2217 325 VASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAK 404 (713)
T ss_pred HHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhcc
Confidence 99999999999999999
Q ss_pred eeEEEecCccccccCchh-----------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEEEE
Q 036987 243 MDVLCSDKTGTLTLNKLT-----------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITY 311 (478)
Q Consensus 243 v~~i~~DKTGTLT~~~~~-----------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv~~ 311 (478)
+|+++||||||||+|++. +++|.+++..+..++ ||+++||++++...... ...+|.....+. +..
T Consensus 405 v~tvvFDKTGTLT~G~p~v~~v~~~~~~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~~~--~~~~~~~i~G~G-v~~ 480 (713)
T COG2217 405 VDTVVFDKTGTLTEGKPEVTDVVALDGDEDELLALAAALEQHSE-HPLAKAIVKAAAERGLP--DVEDFEEIPGRG-VEA 480 (713)
T ss_pred CCEEEEeCCCCCcCCceEEEEEecCCCCHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcCCC--CccceeeeccCc-EEE
Confidence 999999999999999998 468999999999988 99999999977543211 111233333221 111
Q ss_pred EeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCC
Q 036987 312 VDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPP 391 (478)
Q Consensus 312 ~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~l 391 (478)
..+| ..+..|+++.+.+.-. ..+. .....+.+.++|..++.++.++ +++|+++++|++
T Consensus 481 -~v~g--~~v~vG~~~~~~~~~~-~~~~-~~~~~~~~~~~G~t~v~va~dg-----------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 -EVDG--ERVLVGNARLLGEEGI-DLPL-LSERIEALESEGKTVVFVAVDG-----------------KLVGVIALADEL 538 (713)
T ss_pred -EECC--EEEEEcCHHHHhhcCC-Cccc-hhhhHHHHHhcCCeEEEEEECC-----------------EEEEEEEEeCCC
Confidence 1256 5677799998765321 1222 5667788889999999999988 999999999999
Q ss_pred CcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEE
Q 036987 392 HHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHIS 471 (478)
Q Consensus 392 R~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V 471 (478)
||+++++|+.. ++.||...|+|||. ....+.+++.++..+|+|.+.||||.++|+.||++|++|
T Consensus 539 R~~a~~aI~~L--------~~~Gi~~~mLTGDn--------~~~A~~iA~~lGId~v~AellPedK~~~V~~l~~~g~~V 602 (713)
T COG2217 539 RPDAKEAIAAL--------KALGIKVVMLTGDN--------RRTAEAIAKELGIDEVRAELLPEDKAEIVRELQAEGRKV 602 (713)
T ss_pred ChhHHHHHHHH--------HHCCCeEEEEcCCC--------HHHHHHHHHHcChHhheccCCcHHHHHHHHHHHhcCCEE
Confidence 99999999966 77888777777543 225667777777778999999999999999999999999
Q ss_pred EEeCCCC
Q 036987 472 GMTGDGT 478 (478)
Q Consensus 472 ~m~GDGv 478 (478)
+|||||+
T Consensus 603 amVGDGI 609 (713)
T COG2217 603 AMVGDGI 609 (713)
T ss_pred EEEeCCc
Confidence 9999996
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.1e-51 Score=452.34 Aligned_cols=327 Identities=27% Similarity=0.337 Sum_probs=253.9
Q ss_pred chhHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEe
Q 036987 97 DYHDFIGIVIIINSTTSFKE---ENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVE 168 (478)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~ 168 (478)
.|.++.++++ +..+..+++ ++++++.+++|.++. ++|||++++|++++|+|||+|.|++|++|||||+|++
T Consensus 205 ~~~~a~~i~~-l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLL-LFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 4555554443 334445555 456666666676655 8999999999999999999999999999999999999
Q ss_pred cCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccc--------------cc-----
Q 036987 169 GDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHL--------------HL----- 225 (478)
Q Consensus 169 g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~--------------~~----- 225 (478)
| ...||| |+|||||.|+.|.+|+.||+||.+.+|.+.++|+++ .+|++ ++
T Consensus 284 g-~~~vde------s~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~ 356 (741)
T PRK11033 284 P-FASFDE------SALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRF 356 (741)
T ss_pred C-cEEeec------ccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 9 799999 999999999999999999999999999999999998 11110 00
Q ss_pred --------------------------------------------------------------cccceecchhHHhhhcce
Q 036987 226 --------------------------------------------------------------IQSAITKRMTAIEEMAGM 243 (478)
Q Consensus 226 --------------------------------------------------------------~~~ilvk~~~~~e~lg~v 243 (478)
|+||++|+++++|+|+++
T Consensus 357 a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v 436 (741)
T PRK11033 357 SRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRV 436 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCC
Confidence 999999999999999999
Q ss_pred eEEEecCccccccCchh------------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEEE-
Q 036987 244 DVLCSDKTGTLTLNKLT------------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAIT- 310 (478)
Q Consensus 244 ~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv~- 310 (478)
+++|||||||||+|+|+ ++++.+++..+..++ ||+++|+++++.... + .+||.++.+.+...
T Consensus 437 ~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~~---~-~~~~~~~~~~~~g~G 511 (741)
T PRK11033 437 TTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAVEQGST-HPLAQAIVREAQVRG---L-AIPEAESQRALAGSG 511 (741)
T ss_pred CEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhcC---C-CCCCCcceEEEeeEE
Confidence 99999999999999998 456777777776665 999999999875432 1 25677776665322
Q ss_pred EE-eCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCC
Q 036987 311 YV-DGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFD 389 (478)
Q Consensus 311 ~~-~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D 389 (478)
+. ..+|. .+..|+|+.+.+. .+.+...++.+..+|++++++|++. +++|+++|+|
T Consensus 512 v~~~~~g~--~~~ig~~~~~~~~-----~~~~~~~~~~~~~~g~~~v~va~~~-----------------~~~g~i~l~d 567 (741)
T PRK11033 512 IEGQVNGE--RVLICAPGKLPPL-----ADAFAGQINELESAGKTVVLVLRND-----------------DVLGLIALQD 567 (741)
T ss_pred EEEEECCE--EEEEecchhhhhc-----cHHHHHHHHHHHhCCCEEEEEEECC-----------------EEEEEEEEec
Confidence 11 23554 3456999987542 2345556778899999999999876 9999999999
Q ss_pred CCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCC
Q 036987 390 PPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKH 469 (478)
Q Consensus 390 ~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~ 469 (478)
++|||++++|+.. ++.|+...++||+.. .....+.+.++. .++++++|+||.++|+.||+. +
T Consensus 568 ~~r~~a~~~i~~L--------~~~gi~~~llTGd~~--------~~a~~ia~~lgi-~~~~~~~p~~K~~~v~~l~~~-~ 629 (741)
T PRK11033 568 TLRADARQAISEL--------KALGIKGVMLTGDNP--------RAAAAIAGELGI-DFRAGLLPEDKVKAVTELNQH-A 629 (741)
T ss_pred CCchhHHHHHHHH--------HHCCCEEEEEcCCCH--------HHHHHHHHHcCC-CeecCCCHHHHHHHHHHHhcC-C
Confidence 9999999999843 555665554444321 123334444443 357889999999999999965 5
Q ss_pred EEEEeCCCC
Q 036987 470 ISGMTGDGT 478 (478)
Q Consensus 470 ~V~m~GDGv 478 (478)
.|+|+|||+
T Consensus 630 ~v~mvGDgi 638 (741)
T PRK11033 630 PLAMVGDGI 638 (741)
T ss_pred CEEEEECCH
Confidence 899999995
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=6.9e-50 Score=425.14 Aligned_cols=314 Identities=34% Similarity=0.525 Sum_probs=255.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--Ce-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEecccc
Q 036987 107 IINSTTSFKEENNAGNAAAALMA--QS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQF 179 (478)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~--~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~ 179 (478)
+++.+...+++++..++.+.+.+ .. |+|+| ++.|++++|+|||+|.+++||.|||||+|++| .+.|||
T Consensus 7 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vde--- 81 (499)
T TIGR01494 7 LLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVDE--- 81 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEEc---
Confidence 56777888888888888888887 32 99999 99999999999999999999999999999999 899999
Q ss_pred ccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEee-------------cc-------------------------
Q 036987 180 CLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANC-------------NG------------------------- 221 (478)
Q Consensus 180 ~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t~-------------~g------------------------- 221 (478)
|+|||||.|+.|.+|+.+++||.+.+|+..++|+++. .|
T Consensus 82 ---s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 158 (499)
T TIGR01494 82 ---SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLL 158 (499)
T ss_pred ---ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999870 00
Q ss_pred --------------c---ccc---------------------------------cccceecchhHHhhhcceeEEEecCc
Q 036987 222 --------------H---LHL---------------------------------IQSAITKRMTAIEEMAGMDVLCSDKT 251 (478)
Q Consensus 222 --------------~---~~~---------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKT 251 (478)
. +.. ++|+++|+++++|+||+++++|||||
T Consensus 159 la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKT 238 (499)
T TIGR01494 159 IALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKT 238 (499)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCC
Confidence 0 000 88999999999999999999999999
Q ss_pred cccccCchh-HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHH
Q 036987 252 GTLTLNKLT-DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQIL 330 (478)
Q Consensus 252 GTLT~~~~~-~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~ 330 (478)
||||+|+|+ ..+... ..+.. .+||++.|+++++.... ++..||++..++|++++...++ .|+||+++.+.
T Consensus 239 GTLT~~~~~v~~~~~~--~~~~~-s~hp~~~ai~~~~~~~~---~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~ 309 (499)
T TIGR01494 239 GTLTKNEMSFKKVSVL--GGEYL-SGHPDERALVKSAKWKI---LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVL 309 (499)
T ss_pred CccccCceEEEEEEec--CCCcC-CCChHHHHHHHHhhhcC---cceeccCCCCceEEEEEecCCc---EEEeCCHHHHH
Confidence 999999998 111000 00223 34999999999875322 4678999999999998865223 47899999999
Q ss_pred HhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHH
Q 036987 331 HLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETG 410 (478)
Q Consensus 331 ~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia 410 (478)
+.|. . +.+..+.++.+|+|++++|+++ +++|++.|+|++|++++++|+..
T Consensus 310 ~~~~-~----~~~~~~~~~~~g~~~~~~a~~~-----------------~~~g~i~l~d~lr~~~~~~i~~l-------- 359 (499)
T TIGR01494 310 SRVK-D----LEEKVKELAQSGLRVLAVASKE-----------------TLLGLLGLEDPLRDDAKETISEL-------- 359 (499)
T ss_pred HhhH-H----HHHHHHHHHhCCCEEEEEEECC-----------------eEEEEEEecCCCchhHHHHHHHH--------
Confidence 9884 2 3334556788999999999987 89999999999999999999844
Q ss_pred HHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 411 RKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 411 ~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
++.|+...++||+.. .+...+++.++ ++||++|+||.++|+.+|+.|+.|+|+|||+
T Consensus 360 ~~~gi~~~~ltGD~~--------~~a~~ia~~lg---i~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ 416 (499)
T TIGR01494 360 REAGIRVIMLTGDNV--------LTAKAIAKELG---IFARVTPEEKAALVEALQKKGRVVAMTGDGV 416 (499)
T ss_pred HHCCCeEEEEcCCCH--------HHHHHHHHHcC---ceeccCHHHHHHHHHHHHHCCCEEEEECCCh
Confidence 556665555554321 12233333332 3899999999999999999999999999995
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-49 Score=418.38 Aligned_cols=337 Identities=23% Similarity=0.307 Sum_probs=277.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCe--------EeeCCe-EEEEeCCCCCcCcEEEEcCCCeeeccEE
Q 036987 95 DPDYHDFIGIVIIINSTTSFKEENNAGNAAAALMAQS--------YLRDGR-WNEEDAAEMVPGDIISIKLGEIVSADAR 165 (478)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~--------v~r~g~-~~~i~~~~lv~GDiv~v~~G~~IPaD~~ 165 (478)
+..||+...+++.+..+.+|++.+.++|+...+.+++ ++.+|+ ..+|+.+.|.+||+|.|.||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 6788888888887888999999988877766666554 777886 8999999999999999999999999999
Q ss_pred EEecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ec--------------ccccc--
Q 036987 166 LVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CN--------------GHLHL-- 225 (478)
Q Consensus 166 vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~--------------g~~~~-- 225 (478)
|++| ++.||| |++|||++||.|++|+.|.+||.|.+|...+.++++ .+ .++|+
T Consensus 417 Vv~G-ss~VDE------s~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~a 489 (951)
T KOG0207|consen 417 VVDG-SSEVDE------SLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLA 489 (951)
T ss_pred EEeC-ceeech------hhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHH
Confidence 9999 899999 999999999999999999999999999988777776 00 11111
Q ss_pred ---------------------------------------------------------------------------cccce
Q 036987 226 ---------------------------------------------------------------------------IQSAI 230 (478)
Q Consensus 226 ---------------------------------------------------------------------------~~~il 230 (478)
++|+|
T Consensus 490 Dkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvL 569 (951)
T KOG0207|consen 490 DKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVL 569 (951)
T ss_pred HHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceE
Confidence 99999
Q ss_pred ecchhHHhhhcceeEEEecCccccccCchh-------------HHHHHHHHHhcccccCChhhHHHHHHcCCcceee---
Q 036987 231 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKAR--- 294 (478)
Q Consensus 231 vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~--- 294 (478)
+|..+++|.+.++++++||||||||+|+++ +++|.+++..+..+. ||+.+||++|+.......
T Consensus 570 IKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~Se-HPig~AIv~yak~~~~~~~~~ 648 (951)
T KOG0207|consen 570 IKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSE-HPIGKAIVDYAKEKLVEPNPE 648 (951)
T ss_pred EcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCc-CchHHHHHHHHHhcccccCcc
Confidence 999999999999999999999999999999 567888888888777 999999999986543111
Q ss_pred --eEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCC
Q 036987 295 --VHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTK 372 (478)
Q Consensus 295 --~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~ 372 (478)
.....|..+.....+. .+++. ++.|+-+.+.+.-. ..++++...++.....|+.+.++++++
T Consensus 649 ~~~~~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~~-~~~~~i~~~~~~~e~~g~tvv~v~vn~---------- 712 (951)
T KOG0207|consen 649 GVLSFEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNGC-SIPDDILDALTESERKGQTVVYVAVNG---------- 712 (951)
T ss_pred ccceeecccCCCcccceE---EeeeE--EeechHHHHHhcCC-CCchhHHHhhhhHhhcCceEEEEEECC----------
Confidence 2222232222221111 13432 77899999876543 556678888888899999999999998
Q ss_pred CCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEec
Q 036987 373 DNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGL 452 (478)
Q Consensus 373 ~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~ 452 (478)
++.|++.++|++|||+..+|+.. ++.||...|+|||.- -+....++.++..+|||.+
T Consensus 713 -------~l~gv~~l~D~vr~~a~~av~~L--------k~~Gi~v~mLTGDn~--------~aA~svA~~VGi~~V~aev 769 (951)
T KOG0207|consen 713 -------QLVGVFALEDQVRPDAALAVAEL--------KSMGIKVVMLTGDND--------AAARSVAQQVGIDNVYAEV 769 (951)
T ss_pred -------EEEEEEEeccccchhHHHHHHHH--------HhcCceEEEEcCCCH--------HHHHHHHHhhCcceEEecc
Confidence 99999999999999999999855 778887777776432 2455667777777899999
Q ss_pred ChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 453 FPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 453 ~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.|+||.++|+.||+.|.+|+|||||+
T Consensus 770 ~P~~K~~~Ik~lq~~~~~VaMVGDGI 795 (951)
T KOG0207|consen 770 LPEQKAEKIKEIQKNGGPVAMVGDGI 795 (951)
T ss_pred CchhhHHHHHHHHhcCCcEEEEeCCC
Confidence 99999999999999999999999996
No 27
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=9.5e-49 Score=418.49 Aligned_cols=335 Identities=28% Similarity=0.375 Sum_probs=267.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCc
Q 036987 76 WVMEAAAIMAIALAHGGGKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVP 148 (478)
Q Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~ 148 (478)
.+++++++++++++ .|+++.++++ +++.+++.++++++.+.++++.++. |+|||+++.+++++|+|
T Consensus 3 ~l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 45667777888776 6888766555 5566777777888888888887755 99999999999999999
Q ss_pred CcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccc-
Q 036987 149 GDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHL- 223 (478)
Q Consensus 149 GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~- 223 (478)
||+|.|++||+|||||+|++| ++.||| |+|||||.|+.|.+|+.+|+||.+.+|++.++|++| ..|++
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g-~~~vde------s~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~ 148 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSG-TSTVDE------SALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIV 148 (536)
T ss_pred CCEEEEcCCCEeecceEEEeC-cEEEEe------cccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHH
Confidence 999999999999999999999 799999 999999999999999999999999999999999999 11111
Q ss_pred -------------cc-----------------------------------------------------------------
Q 036987 224 -------------HL----------------------------------------------------------------- 225 (478)
Q Consensus 224 -------------~~----------------------------------------------------------------- 225 (478)
++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~ 228 (536)
T TIGR01512 149 NLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAA 228 (536)
T ss_pred HHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHH
Confidence 00
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeec
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLL 299 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~ 299 (478)
++||++|+++++|++|+++++|||||||||+|+|+ .+++.+++.++..+. ||+++|+++++.... +
T Consensus 229 k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~-------~ 300 (536)
T TIGR01512 229 RHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASS-HPLARAIVDYARKRE-------N 300 (536)
T ss_pred HCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHHHHHHHHHHHhccCC-CcHHHHHHHHHHhcC-------C
Confidence 99999999999999999999999999999999999 456777777766665 999999999875432 3
Q ss_pred CCCCCceEEEEE-EeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCC
Q 036987 300 FNPTDKRAAITY-VDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGP 378 (478)
Q Consensus 300 F~s~~k~~sv~~-~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~ 378 (478)
|++.......-+ ...+|. .+..|+++.+.+... ..+..+|.+++.++.+.
T Consensus 301 ~~~~~~~~g~gi~~~~~g~--~~~ig~~~~~~~~~~-----------~~~~~~~~~~~~v~~~~---------------- 351 (536)
T TIGR01512 301 VESVEEVPGEGVRAVVDGG--EVRIGNPRSLEAAVG-----------ARPESAGKTIVHVARDG---------------- 351 (536)
T ss_pred CcceEEecCCeEEEEECCe--EEEEcCHHHHhhcCC-----------cchhhCCCeEEEEEECC----------------
Confidence 333222111111 112454 345699887644321 14566788888888765
Q ss_pred cEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCC-CCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHH
Q 036987 379 WEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGM-GTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHK 457 (478)
Q Consensus 379 l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K 457 (478)
.++|.+.++|++||+++++|+.. ++.|+ ...+.|++.. .....+.+.++..++|+++.|++|
T Consensus 352 -~~~g~i~~~d~l~~~~~e~i~~L--------~~~Gi~~v~vvTgd~~--------~~a~~i~~~lgi~~~f~~~~p~~K 414 (536)
T TIGR01512 352 -TYLGYILLSDEPRPDAAEAIAEL--------KALGIEKVVMLTGDRR--------AVAERVARELGIDEVHAELLPEDK 414 (536)
T ss_pred -EEEEEEEEeccchHHHHHHHHHH--------HHcCCCcEEEEcCCCH--------HHHHHHHHHcCChhhhhccCcHHH
Confidence 99999999999999999999865 77888 6666665321 134556666666678999999999
Q ss_pred HHHHHHHHhCCCEEEEeCCCC
Q 036987 458 YEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 458 ~~iV~~lq~~g~~V~m~GDGv 478 (478)
.++++.++..++.|+|+|||+
T Consensus 415 ~~~i~~l~~~~~~v~~vGDg~ 435 (536)
T TIGR01512 415 LEIVKELREKYGPVAMVGDGI 435 (536)
T ss_pred HHHHHHHHhcCCEEEEEeCCH
Confidence 999999999999999999994
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.3e-48 Score=417.74 Aligned_cols=347 Identities=25% Similarity=0.336 Sum_probs=266.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCC-eEEEEeCCCCC
Q 036987 76 WVMEAAAIMAIALAHGGGKDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDG-RWNEEDAAEMV 147 (478)
Q Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g-~~~~i~~~~lv 147 (478)
.++.++++++++++ .|.++..+++ ++..+++.++++++.+..+++.+.. |+||| +++.|++++|+
T Consensus 3 ~l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 3 LLMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCC
Confidence 34566667777765 6766665555 6666677777777777777776554 99995 99999999999
Q ss_pred cCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccc
Q 036987 148 PGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHL 223 (478)
Q Consensus 148 ~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~ 223 (478)
|||+|.|++||.|||||+|++| ++.||| |+|||||.|+.|.+|+.+|+||.+.+|.+.++|++| ..|++
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g-~~~vde------s~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i 148 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISG-ESEVDE------SALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQI 148 (556)
T ss_pred CCCEEEECCCCEeccceEEEec-ceEEee------hhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHH
Confidence 9999999999999999999999 799999 999999999999999999999999999999999998 11111
Q ss_pred --------------cc----------------------------------------------------------------
Q 036987 224 --------------HL---------------------------------------------------------------- 225 (478)
Q Consensus 224 --------------~~---------------------------------------------------------------- 225 (478)
++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~ 228 (556)
T TIGR01525 149 VKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAA 228 (556)
T ss_pred HHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHH
Confidence 00
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh--------------HHHHHHHHHhcccccCChhhHHHHHHcCCcc
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT--------------DMVVLMAARASTLENQVAIDGAIVSMLAGPK 291 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~--------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~ 291 (478)
++|+++|+++++|+||+++++|||||||||+|+|+ ++++.+++.++..+. ||+++|+++++....
T Consensus 229 ~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~ 307 (556)
T TIGR01525 229 RRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRG 307 (556)
T ss_pred HCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998 245666776666665 999999999875322
Q ss_pred eeeeEeecC--CCC-CceEEEEEEeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeecccccc
Q 036987 292 KARVHFLLF--NPT-DKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRK 368 (478)
Q Consensus 292 ~~~~~~~~F--~s~-~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~ 368 (478)
..... +| ... .+..... .+|. ..+..|+++.+ +..... ...+...+..+..+|+|+++++++.
T Consensus 308 ~~~~~--~~~~~~~~~~gi~~~---~~g~-~~~~lg~~~~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~v~~~~------ 373 (556)
T TIGR01525 308 LELPK--QEDVEEVPGKGVEAT---VDGQ-EEVRIGNPRLL-ELAAEP-ISASPDLLNEGESQGKTVVFVAVDG------ 373 (556)
T ss_pred CCccc--ccCeeEecCCeEEEE---ECCe-eEEEEecHHHH-hhcCCC-chhhHHHHHHHhhCCcEEEEEEECC------
Confidence 11000 21 110 1111111 1342 35667888876 211111 1223455667889999999999876
Q ss_pred CCCCCCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcC-CCCCCccccccccccccccCCcchHHHHhhcCC
Q 036987 369 RGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLG-MGTNMYLSSSLLRESKDETNSALPIDELIEKAD 447 (478)
Q Consensus 369 ~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~G-i~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 447 (478)
+++|.+.++|++||+++++|+.. ++.| +...+.|++.- . ....+.+.++..+
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L--------~~~g~i~v~ivTgd~~-----~---~a~~i~~~lgi~~ 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAAL--------KRAGGIKLVMLTGDNR-----S---AAEAVAAELGIDE 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHH--------HHcCCCeEEEEeCCCH-----H---HHHHHHHHhCCCe
Confidence 89999999999999999999865 6778 76666565321 1 3455666667778
Q ss_pred EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 448 GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 448 v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
+|+++.|++|.++++.+++.|+.|+|+|||+
T Consensus 427 ~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ 457 (556)
T TIGR01525 427 VHAELLPEDKLAIVKELQEEGGVVAMVGDGI 457 (556)
T ss_pred eeccCCHHHHHHHHHHHHHcCCEEEEEECCh
Confidence 9999999999999999999999999999995
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4.3e-48 Score=415.04 Aligned_cols=327 Identities=26% Similarity=0.340 Sum_probs=252.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhcCe-----Eee-CCeEEEEeCCCCCcCcEEEEcCCCeeeccEEE
Q 036987 96 PDYHDFIGIVIIINSTTSFKEENNA---GNAAAALMAQS-----YLR-DGRWNEEDAAEMVPGDIISIKLGEIVSADARL 166 (478)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~l~~~~-----v~r-~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~v 166 (478)
..|++.+.+++++..+..+++++.. .+.+++|.+.. ++| +|.+++|++++|+|||+|.|++||+|||||+|
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v 130 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTV 130 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEE
Confidence 3577777777767777788887644 44555555543 666 47789999999999999999999999999999
Q ss_pred EecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccc--------------cc---
Q 036987 167 VEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHL--------------HL--- 225 (478)
Q Consensus 167 l~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~--------------~~--- 225 (478)
++| ++.||| |+|||||.|+.|.+|+.||+||.|.+|.+.++|+++ .+|++ ++
T Consensus 131 ~~g-~~~vde------s~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d 203 (562)
T TIGR01511 131 IEG-ESEVDE------SLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLAD 203 (562)
T ss_pred EEC-ceEEeh------HhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHH
Confidence 999 799999 999999999999999999999999999999999998 11111 11
Q ss_pred --------------------------------------------------------cccceecchhHHhhhcceeEEEec
Q 036987 226 --------------------------------------------------------IQSAITKRMTAIEEMAGMDVLCSD 249 (478)
Q Consensus 226 --------------------------------------------------------~~~ilvk~~~~~e~lg~v~~i~~D 249 (478)
++||++|+++++|+|++++++|||
T Consensus 204 ~~a~~~~~~v~~~a~~~~~~~~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 204 KVAGYFVPVVIAIALITFVIWLFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 999999999999999999999999
Q ss_pred CccccccCchh------------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCce-EEEEEEeCCC
Q 036987 250 KTGTLTLNKLT------------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKR-AAITYVDGAG 316 (478)
Q Consensus 250 KTGTLT~~~~~------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~-~sv~~~~~~g 316 (478)
||||||+|+|+ ++++.+++.++..++ ||+++|+++++...........+|...... .... .+|
T Consensus 284 KTGTLT~g~~~v~~i~~~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~---~~g 359 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHVFGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGT---VEG 359 (562)
T ss_pred CCCCCcCCCEEEEEEecCCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEE---ECC
Confidence 99999999988 467888888887776 999999999875332110111122221111 1111 245
Q ss_pred eEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcH
Q 036987 317 IMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSA 396 (478)
Q Consensus 317 ~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~ 396 (478)
..+..|+++.+.+... . +..+.++|.+++.++.+. +++|++.++|++||+++
T Consensus 360 --~~~~iG~~~~~~~~~~-~--------~~~~~~~g~~~~~~~~~~-----------------~~~g~~~~~d~l~~~a~ 411 (562)
T TIGR01511 360 --TKIQLGNEKLLGENAI-K--------IDGKAEQGSTSVLVAVNG-----------------ELAGVFALEDQLRPEAK 411 (562)
T ss_pred --EEEEEECHHHHHhCCC-C--------CChhhhCCCEEEEEEECC-----------------EEEEEEEecccccHHHH
Confidence 4567899998654321 1 112456899999998877 99999999999999999
Q ss_pred HHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCC
Q 036987 397 ETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGD 476 (478)
Q Consensus 397 ~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GD 476 (478)
++|+.. ++.|+...+.|++.- . ..+.+.+.++. .+|+++.|++|.++++.++++|+.|+|+||
T Consensus 412 e~i~~L--------k~~Gi~v~ilSgd~~-----~---~a~~ia~~lgi-~~~~~~~p~~K~~~v~~l~~~~~~v~~VGD 474 (562)
T TIGR01511 412 EVIQAL--------KRRGIEPVMLTGDNR-----K---TAKAVAKELGI-NVRAEVLPDDKAALIKELQEKGRVVAMVGD 474 (562)
T ss_pred HHHHHH--------HHcCCeEEEEcCCCH-----H---HHHHHHHHcCC-cEEccCChHHHHHHHHHHHHcCCEEEEEeC
Confidence 999865 677876665554321 1 23344444433 389999999999999999999999999999
Q ss_pred CC
Q 036987 477 GT 478 (478)
Q Consensus 477 Gv 478 (478)
|+
T Consensus 475 g~ 476 (562)
T TIGR01511 475 GI 476 (562)
T ss_pred CC
Confidence 95
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=9.8e-48 Score=430.36 Aligned_cols=334 Identities=21% Similarity=0.261 Sum_probs=264.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEE
Q 036987 96 PDYHDFIGIVIIINSTTSFKEENNAGNAAA---ALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLV 167 (478)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl 167 (478)
..|++...+++++..+.+|++.+...|+.+ +|.++. ++|+|.+++|++++|+|||+|.|++||+||+||+|+
T Consensus 283 ~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 283 HLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 347787777777788889999877665554 444443 889999999999999999999999999999999999
Q ss_pred ecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEee----cccc--------------cc----
Q 036987 168 EGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANC----NGHL--------------HL---- 225 (478)
Q Consensus 168 ~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t~----~g~~--------------~~---- 225 (478)
+| .+.||| |+|||||.|+.|.+|+.||+||.|.+|.+.++|+++. ++++ ++
T Consensus 363 ~g-~~~vde------S~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~ 435 (834)
T PRK10671 363 QG-EAWLDE------AMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADK 435 (834)
T ss_pred Ec-eEEEee------hhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHH
Confidence 99 899999 9999999999999999999999999999999999980 1100 00
Q ss_pred ----------------------------------------------------------------cccceecchhHHhhhc
Q 036987 226 ----------------------------------------------------------------IQSAITKRMTAIEEMA 241 (478)
Q Consensus 226 ----------------------------------------------------------------~~~ilvk~~~~~e~lg 241 (478)
++||++|+++++|+|+
T Consensus 436 ~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~ 515 (834)
T PRK10671 436 ISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRAS 515 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhc
Confidence 9999999999999999
Q ss_pred ceeEEEecCccccccCchh------------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEE
Q 036987 242 GMDVLCSDKTGTLTLNKLT------------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAI 309 (478)
Q Consensus 242 ~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv 309 (478)
+++++|||||||||+|+|+ .+++.+++.++..++ ||+++||++++.+... ....+|....+.. +
T Consensus 516 ~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~~--~~~~~~~~~~g~G-v 591 (834)
T PRK10671 516 TLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMTL--PQVNGFRTLRGLG-V 591 (834)
T ss_pred CCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCCC--CCcccceEecceE-E
Confidence 9999999999999999998 356777787777776 9999999988643211 1122333333221 1
Q ss_pred EEEeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCC
Q 036987 310 TYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFD 389 (478)
Q Consensus 310 ~~~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D 389 (478)
.. ..+|. .+.+|+++.+.+... ..+.+.+.++.+.++|.++++++++. .++|++.+.|
T Consensus 592 ~~-~~~g~--~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~v~va~~~-----------------~~~g~~~l~d 649 (834)
T PRK10671 592 SG-EAEGH--ALLLGNQALLNEQQV--DTKALEAEITAQASQGATPVLLAVDG-----------------KAAALLAIRD 649 (834)
T ss_pred EE-EECCE--EEEEeCHHHHHHcCC--ChHHHHHHHHHHHhCCCeEEEEEECC-----------------EEEEEEEccC
Confidence 11 12553 467799998765431 12445666778889999999999977 8999999999
Q ss_pred CCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCC
Q 036987 390 PPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKH 469 (478)
Q Consensus 390 ~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~ 469 (478)
++||+++++|+.. ++.|+...+.|++.- . ....+.+.++..++|+++.|++|.++++.++.+|+
T Consensus 650 ~~r~~a~~~i~~L--------~~~gi~v~~~Tgd~~-----~---~a~~ia~~lgi~~~~~~~~p~~K~~~i~~l~~~~~ 713 (834)
T PRK10671 650 PLRSDSVAALQRL--------HKAGYRLVMLTGDNP-----T---TANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSQGR 713 (834)
T ss_pred cchhhHHHHHHHH--------HHCCCeEEEEcCCCH-----H---HHHHHHHHcCCCEEEeCCCHHHHHHHHHHHhhcCC
Confidence 9999999999754 667776555554321 1 33445566666678999999999999999999999
Q ss_pred EEEEeCCCC
Q 036987 470 ISGMTGDGT 478 (478)
Q Consensus 470 ~V~m~GDGv 478 (478)
.|+|+|||+
T Consensus 714 ~v~~vGDg~ 722 (834)
T PRK10671 714 QVAMVGDGI 722 (834)
T ss_pred EEEEEeCCH
Confidence 999999995
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-48 Score=396.70 Aligned_cols=424 Identities=22% Similarity=0.208 Sum_probs=324.0
Q ss_pred HHHHhcCCCccCCCCchHH----HHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 036987 45 ERLNLFGYNRLEGKKESKI----LKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNA 120 (478)
Q Consensus 45 ~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 120 (478)
.++++|-+|.+.+.++..+ ..+++||+.++|+++++.++..++..+..+....|+-++..++++..+.+..+++++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888999999887654 557889999999999999888888666555555666666666678888999999998
Q ss_pred HHHHHHhhcCe---EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecC----cEEEeccccccccccccCCceee
Q 036987 121 GNAAAALMAQS---YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGD----PLKIDRFQFCLWSALTGESLPVT 193 (478)
Q Consensus 121 ~~~~~~l~~~~---v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~----~~~vde~~~~~~S~LTGEs~pv~ 193 (478)
.+..+..++.. ..|+|.... ++++|.+||+|.++.+++||||.+++..+ ++.+-+ -.|+||+....
T Consensus 154 ~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRT------DQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRT------DQLDGETDWKL 226 (1051)
T ss_pred HHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEec------cccCCccccee
Confidence 88888887766 567776655 99999999999999999999999999743 688888 88999987666
Q ss_pred cCC-----------------------------------------------CCeeeeccEEeeeeEEEEEEEe--------
Q 036987 194 KNP-----------------------------------------------GDGVYSGSTCKQGEIAAVVIAN-------- 218 (478)
Q Consensus 194 K~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~t-------- 218 (478)
|-| .|.++++|.+.+|.+.++|+.|
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsvM 306 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSVM 306 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHHh
Confidence 543 1589999999999999999999
Q ss_pred -------ecccc-------cc-----------------------------------------------------------
Q 036987 219 -------CNGHL-------HL----------------------------------------------------------- 225 (478)
Q Consensus 219 -------~~g~~-------~~----------------------------------------------------------- 225 (478)
.+|.+ ++
T Consensus 307 Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~ 386 (1051)
T KOG0210|consen 307 NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEH 386 (1051)
T ss_pred ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhccc
Confidence 12211 11
Q ss_pred ---cccceecchhHHhhhcceeEEEecCccccccCchh----------------H-------------------------
Q 036987 226 ---IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT----------------D------------------------- 261 (478)
Q Consensus 226 ---~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~----------------~------------------------- 261 (478)
-.|.++|.....|.||+++++.+|||||||+|+|. +
T Consensus 387 D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k 466 (1051)
T KOG0210|consen 387 DKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVK 466 (1051)
T ss_pred CCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhc
Confidence 55889999999999999999999999999999999 0
Q ss_pred --------HHHHHHHHhccc----cc--------CChhhHHHHHHcCCcc----------------------eeeeEeec
Q 036987 262 --------MVVLMAARASTL----EN--------QVAIDGAIVSMLAGPK----------------------KARVHFLL 299 (478)
Q Consensus 262 --------~~l~~~~~~~~~----~~--------~~p~~~ai~~~~~~~~----------------------~~~~~~~~ 299 (478)
+.....+.|... .+ ..|.+.||+++.+..+ .+.++.||
T Consensus 467 ~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFP 546 (1051)
T KOG0210|consen 467 KDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFP 546 (1051)
T ss_pred CcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEec
Confidence 111111111110 01 1467777776642111 12288999
Q ss_pred CCCCCceEEEEEEeC-CCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCC--------
Q 036987 300 FNPTDKRAAITYVDG-AGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRG-------- 370 (478)
Q Consensus 300 F~s~~k~~sv~~~~~-~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~-------- 370 (478)
|+|+.|||+++|++. .++...|.|||+-.|..+. +..+.+++...+|+++|+|++.+|.|.++..+++.
T Consensus 547 FtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV--q~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A 624 (1051)
T KOG0210|consen 547 FTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV--QYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAA 624 (1051)
T ss_pred cccccceeeEEEecCCCceEEEEEecchHHHhccc--ccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhh
Confidence 999999999999964 6889999999999988776 56677888889999999999999999998765431
Q ss_pred -----C---------CCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCccc
Q 036987 371 -----T---------KDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYLS 422 (478)
Q Consensus 371 -----~---------~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~~ 422 (478)
+ ...+|.||.++|+.+.||.++++++.+++ |..+||+.||+..++......-
T Consensus 625 ~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~i 704 (1051)
T KOG0210|consen 625 KLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYI 704 (1051)
T ss_pred hCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceE
Confidence 1 12468999999999999999999999999 9999999999999985421000
Q ss_pred c--------------------------ccccccccc--cCCcchHHHHhhcC--CEEEecChHHHHHHHHHHHhC-CCEE
Q 036987 423 S--------------------------SLLRESKDE--TNSALPIDELIEKA--DGFAGLFPEHKYEIVRRLHDR-KHIS 471 (478)
Q Consensus 423 ~--------------------------~~~g~~~~~--~~~~~~~~~~l~~~--~v~ar~~Pe~K~~iV~~lq~~-g~~V 471 (478)
. .+.|++..- ..-.+++.++.-.+ .|+||++|.||+.+++.+|++ |..|
T Consensus 705 hv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krv 784 (1051)
T KOG0210|consen 705 HVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRV 784 (1051)
T ss_pred EEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceE
Confidence 0 011111000 00012333333222 489999999999999999986 8999
Q ss_pred EEeCCC
Q 036987 472 GMTGDG 477 (478)
Q Consensus 472 ~m~GDG 477 (478)
+.+|||
T Consensus 785 c~IGDG 790 (1051)
T KOG0210|consen 785 CAIGDG 790 (1051)
T ss_pred EEEcCC
Confidence 999999
No 32
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=5.9e-46 Score=410.06 Aligned_cols=424 Identities=19% Similarity=0.186 Sum_probs=326.2
Q ss_pred HHHhcCCCccCCCCchHH----HHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036987 46 RLNLFGYNRLEGKKESKI----LKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSFKEENNAG 121 (478)
Q Consensus 46 r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 121 (478)
+...|-.|.+...|++.+ +.+++||+++.|++|++.++++++. ..+..+....-++.+++.++++.+.+++++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~ 106 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLGITAIKDAIEDYRRH 106 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeehHHHHHHHHhhhhhh
Confidence 556999999999998765 7789999999999999999999997 33332333334444444789999999999999
Q ss_pred HHHHHhhcCe--EeeCCe-EEEEeCCCCCcCcEEEEcCCCeeeccEEEEecC----cEEEeccccccccccccCCceeec
Q 036987 122 NAAAALMAQS--YLRDGR-WNEEDAAEMVPGDIISIKLGEIVSADARLVEGD----PLKIDRFQFCLWSALTGESLPVTK 194 (478)
Q Consensus 122 ~~~~~l~~~~--v~r~g~-~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~----~~~vde~~~~~~S~LTGEs~pv~K 194 (478)
+...++++.. |+|++. +....+++|++||+|.+..++.+|||.++++++ -|.|+. +.|.||+....|
T Consensus 107 ~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT------~nLDGEtnLK~k 180 (1151)
T KOG0206|consen 107 KQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVET------ANLDGETNLKVK 180 (1151)
T ss_pred hccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEE------eecCCcccccee
Confidence 9999999888 888643 899999999999999999999999999999865 599999 999999988877
Q ss_pred CCC-----------------------------------------------CeeeeccEEeeee-EEEEEEEeecccccc-
Q 036987 195 NPG-----------------------------------------------DGVYSGSTCKQGE-IAAVVIANCNGHLHL- 225 (478)
Q Consensus 195 ~~~-----------------------------------------------~~v~aGt~v~~g~-~~~~V~~t~~g~~~~- 225 (478)
..- +.++.|+.+.+.. +.+.|+-| |+-++
T Consensus 181 ~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~t--G~dtK~ 258 (1151)
T KOG0206|consen 181 QALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFT--GHDTKL 258 (1151)
T ss_pred eehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEc--CCcchH
Confidence 531 2344555555543 45556665 11111
Q ss_pred --------------------------------------------------------------------------------
Q 036987 226 -------------------------------------------------------------------------------- 225 (478)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (478)
T Consensus 259 ~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~l 338 (1151)
T KOG0206|consen 259 MQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYL 338 (1151)
T ss_pred HHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhce
Confidence
Q ss_pred -------------------------------cccceecchhHHhhhcceeEEEecCccccccCchh--------------
Q 036987 226 -------------------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------------- 260 (478)
Q Consensus 226 -------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------------- 260 (478)
...+.+|..+.-|.||++++|++|||||||+|.|.
T Consensus 339 iPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~ 418 (1151)
T KOG0206|consen 339 IPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRN 418 (1151)
T ss_pred EEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccC
Confidence 77889999999999999999999999999999998
Q ss_pred -----------H----------------------------------HHHHHHHHhccc---c----------cCChhhHH
Q 036987 261 -----------D----------------------------------MVVLMAARASTL---E----------NQVAIDGA 282 (478)
Q Consensus 261 -----------~----------------------------------~~l~~~~~~~~~---~----------~~~p~~~a 282 (478)
. ..+...+.|... . ...|.+.|
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~A 498 (1151)
T KOG0206|consen 419 VTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAA 498 (1151)
T ss_pred CChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHH
Confidence 0 011111111110 0 12578888
Q ss_pred HHHHcCCcc---------------------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc---HHHH
Q 036987 283 IVSMLAGPK---------------------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH---KEIE 338 (478)
Q Consensus 283 i~~~~~~~~---------------------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~---~~~~ 338 (478)
++..+.+.. ...+++.+|+|.||||||+++.++|+..+|||||+..|.+++. ....
T Consensus 499 lV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~ 578 (1151)
T KOG0206|consen 499 LVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLR 578 (1151)
T ss_pred HHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHH
Confidence 887653211 1228899999999999999999999999999999999999997 3566
Q ss_pred HHHHHHHHHHhhccceeeEEEeeeccccccCC---------------------CCCCCCCCcEEEEEeecCCCCCcCcHH
Q 036987 339 KKVHGIIDKFAECGLRSLAVAWQVINLCRKRG---------------------TKDNPGGPWEFVGLLPLFDPPHHDSAE 397 (478)
Q Consensus 339 ~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~---------------------~~~~~e~~l~~lG~i~~~D~lR~~~~~ 397 (478)
+...+++++|+.+|+|++++|||++++++++. ..+.+|.||+++|..++||+|+++|++
T Consensus 579 e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPe 658 (1151)
T KOG0206|consen 579 EKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPE 658 (1151)
T ss_pred HHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchH
Confidence 77778999999999999999999999876531 235679999999999999999999999
Q ss_pred HHH--------------HhHHHHHHHHHHcCCCCCCcccc----------------------------------------
Q 036987 398 TIS--------------DQIAIAKETGRKLGMGTNMYLSS---------------------------------------- 423 (478)
Q Consensus 398 ~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~---------------------------------------- 423 (478)
+|+ |+.+||++||-.|++...-++.-
T Consensus 659 tI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 738 (1151)
T KOG0206|consen 659 TIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE 738 (1151)
T ss_pred HHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc
Confidence 999 99999999999999865321100
Q ss_pred -----ccccccccccCCcch---HHHHhhcC--CEEEecChHHHHHHHHHHHh-CCCEEEEeCCCC
Q 036987 424 -----SLLRESKDETNSALP---IDELIEKA--DGFAGLFPEHKYEIVRRLHD-RKHISGMTGDGT 478 (478)
Q Consensus 424 -----~~~g~~~~~~~~~~~---~~~~l~~~--~v~ar~~Pe~K~~iV~~lq~-~g~~V~m~GDGv 478 (478)
.+.|......++.+. +-++...+ .+++|++|.||+.+|+..++ .|.+++.+|||.
T Consensus 739 ~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 739 KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 111222111222211 22222222 38999999999999999974 488999999994
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-43 Score=352.37 Aligned_cols=365 Identities=25% Similarity=0.356 Sum_probs=277.0
Q ss_pred HHhhHHHHHHHHHHHHHHHHhc----CCC--CCCchhHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCe------E
Q 036987 69 CMCNPLSWVMEAAAIMAIALAH----GGG--KDPDYHDFIGIVI----IINSTTSFKEENNAGNAAAALMAQS------Y 132 (478)
Q Consensus 69 ~~~~~~~~~l~~~~~~~~~~~~----~~~--~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~~l~~~~------v 132 (478)
+.+||..++.++.++++.++.+ .++ ....|...+.+++ ++..+.+.+.|-|.+.+.+.|++.. .
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 5788888888888877764332 222 2223333333333 3333344444444444455555433 5
Q ss_pred eeC-CeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCC---CeeeeccEEee
Q 036987 133 LRD-GRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPG---DGVYSGSTCKQ 208 (478)
Q Consensus 133 ~r~-g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~---~~v~aGt~v~~ 208 (478)
+++ |+++.+++.+|+.||+|.|.+||.||+||.|++| ...||| |.+||||.||.|.+| +.|-.||.+++
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdE------SAITGESaPViresGgD~ssVtGgT~v~S 181 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDE------SAITGESAPVIRESGGDFSSVTGGTRVLS 181 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecch------hhccCCCcceeeccCCCcccccCCcEEee
Confidence 554 8999999999999999999999999999999999 899999 999999999999998 78999999999
Q ss_pred eeEEEEEEEeecccc-------------cc--------------------------------------------------
Q 036987 209 GEIAAVVIANCNGHL-------------HL-------------------------------------------------- 225 (478)
Q Consensus 209 g~~~~~V~~t~~g~~-------------~~-------------------------------------------------- 225 (478)
.+.++++++..-..| ++
T Consensus 182 D~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LI 261 (681)
T COG2216 182 DWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLI 261 (681)
T ss_pred eeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHh
Confidence 999999888710000 00
Q ss_pred --------------------cccceecchhHHhhhcceeEEEecCccccccCchh------------HHHHHHHHHhccc
Q 036987 226 --------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------------DMVVLMAARASTL 273 (478)
Q Consensus 226 --------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------------~~~l~~~~~~~~~ 273 (478)
+.|++-+++.++|.+|.+|++..|||||+|.|+-. +++...+..++-.
T Consensus 262 PTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~ 341 (681)
T COG2216 262 PTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLA 341 (681)
T ss_pred cccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999987766 3444444444433
Q ss_pred ccCChhhHHHHHHcCCcc-----ee---eeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc---HHHHHHHH
Q 036987 274 ENQVAIDGAIVSMLAGPK-----KA---RVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH---KEIEKKVH 342 (478)
Q Consensus 274 ~~~~p~~~ai~~~~~~~~-----~~---~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~---~~~~~~~~ 342 (478)
. +.|-.++|+..+.... .. .....||+.+.|++.+-. .++ ..+.|||++.+.+... ...+..+.
T Consensus 342 D-eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~ 416 (681)
T COG2216 342 D-ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLD 416 (681)
T ss_pred c-CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHH
Confidence 3 4777888887663221 11 136789998887666543 233 6789999999998775 34788999
Q ss_pred HHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccc
Q 036987 343 GIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLS 422 (478)
Q Consensus 343 ~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~ 422 (478)
...++.++.|-..++++.++ +++|.+.+.|-++|+.+|-+++. |++||.+.|.||
T Consensus 417 ~~~~~vs~~GGTPL~V~~~~-----------------~~~GVI~LkDivK~Gi~ERf~el--------R~MgIkTvM~TG 471 (681)
T COG2216 417 AAVDEVSRLGGTPLVVVENG-----------------RILGVIYLKDIVKPGIKERFAEL--------RKMGIKTVMITG 471 (681)
T ss_pred HHHHHHHhcCCCceEEEECC-----------------EEEEEEEehhhcchhHHHHHHHH--------HhcCCeEEEEeC
Confidence 99999999999999999988 99999999999999999999855 666666666665
Q ss_pred cccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 423 SSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 423 ~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
+. .++...++.-.+-.+..|.++||+|.++|+.-|.+|+.|||||||+
T Consensus 472 DN--------~~TAa~IA~EAGVDdfiAeatPEdK~~~I~~eQ~~grlVAMtGDGT 519 (681)
T COG2216 472 DN--------PLTAAAIAAEAGVDDFIAEATPEDKLALIRQEQAEGRLVAMTGDGT 519 (681)
T ss_pred CC--------HHHHHHHHHHhCchhhhhcCChHHHHHHHHHHHhcCcEEEEcCCCC
Confidence 32 2344444444444456899999999999999999999999999996
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.89 E-value=1.7e-22 Score=193.70 Aligned_cols=108 Identities=41% Similarity=0.647 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCe------EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEe-cCcEEEec
Q 036987 104 IVIIINSTTSFKEENNAGNAAAALMAQS------YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVE-GDPLKIDR 176 (478)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~l~~~~------v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~-g~~~~vde 176 (478)
+++++..+.++++++++++..+++++.. |+|||+++.+++++|+|||+|.|++||.+||||+|++ | .+.|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~vd~ 82 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYVDE 82 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEEEC
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccccc
Confidence 3337788889999999999999887644 9999999999999999999999999999999999999 7 899999
Q ss_pred cccccccccccCCceeecC-----CCCeeeeccEEeeeeEEEEEEEe
Q 036987 177 FQFCLWSALTGESLPVTKN-----PGDGVYSGSTCKQGEIAAVVIAN 218 (478)
Q Consensus 177 ~~~~~~S~LTGEs~pv~K~-----~~~~v~aGt~v~~g~~~~~V~~t 218 (478)
|.||||+.|+.|. .++.+|+||.+.+|.+.++|++|
T Consensus 83 ------s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~t 123 (230)
T PF00122_consen 83 ------SALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIAT 123 (230)
T ss_dssp ------HHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-
T ss_pred ------ccccccccccccccccccccchhhcccccccccccccccee
Confidence 9999999999999 99999999999999999999999
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.79 E-value=2.2e-19 Score=169.33 Aligned_cols=193 Identities=26% Similarity=0.337 Sum_probs=122.3
Q ss_pred eeEEEecCccccccCchhH------HHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEEEEEeCCC
Q 036987 243 MDVLCSDKTGTLTLNKLTD------MVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVDGAG 316 (478)
Q Consensus 243 v~~i~~DKTGTLT~~~~~~------~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv~~~~~~g 316 (478)
|++||||||||||+|++.- .++..+...+..++ ||++.++..+........- ..+|.....++..... ++
T Consensus 1 i~~i~fDktGTLt~~~~~v~~~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~ 76 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVAPPSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWSKS-LESFSEFIGRGISGDV--DG 76 (215)
T ss_dssp ESEEEEECCTTTBESHHEEESCSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHHSC-CEEEEEETTTEEEEEE--HC
T ss_pred CeEEEEecCCCcccCeEEEEeccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccchhh-hhhheeeeeccccccc--cc
Confidence 6899999999999999874 45555655555566 9999999988754211000 1112222222111111 12
Q ss_pred eEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcH
Q 036987 317 IMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSA 396 (478)
Q Consensus 317 ~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~ 396 (478)
. +. |+++.+...+... .............|.+.+.++... .++|.+.+.|++||+++
T Consensus 77 ~---~~-g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~d~~~~~~~ 133 (215)
T PF00702_consen 77 I---YL-GSPEWIHELGIRV--ISPDLVEEIQESQGRTVIVLAVNL-----------------IFLGLFGLRDPLRPGAK 133 (215)
T ss_dssp H---EE-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCEEEEESH-----------------EEEEEEEEEEEBHTTHH
T ss_pred c---cc-ccchhhhhccccc--cccchhhhHHHhhCCcccceeecC-----------------eEEEEEeecCcchhhhh
Confidence 2 22 9999887765321 112222233356677777777644 89999999999999999
Q ss_pred HHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCC--EEEec--ChHHH--HHHHHHHHhCCCE
Q 036987 397 ETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKAD--GFAGL--FPEHK--YEIVRRLHDRKHI 470 (478)
Q Consensus 397 ~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~--v~ar~--~Pe~K--~~iV~~lq~~g~~ 470 (478)
++|+.. ++.|+...++||+.. .....+.+.++... |||++ +|++| .++++.||..++.
T Consensus 134 ~~l~~L--------~~~Gi~~~i~TGD~~--------~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~ 197 (215)
T PF00702_consen 134 EALQEL--------KEAGIKVAILTGDNE--------STASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGE 197 (215)
T ss_dssp HHHHHH--------HHTTEEEEEEESSEH--------HHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGG
T ss_pred hhhhhh--------hccCcceeeeecccc--------ccccccccccccccccccccccccccchhHHHHHHHHhcCCCE
Confidence 999933 444443333333211 12233333333333 89999 99999 9999999977779
Q ss_pred EEEeCCCC
Q 036987 471 SGMTGDGT 478 (478)
Q Consensus 471 V~m~GDGv 478 (478)
|+|+|||+
T Consensus 198 v~~vGDg~ 205 (215)
T PF00702_consen 198 VAMVGDGV 205 (215)
T ss_dssp EEEEESSG
T ss_pred EEEEccCH
Confidence 99999995
No 36
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.31 E-value=5.5e-12 Score=97.36 Aligned_cols=63 Identities=32% Similarity=0.460 Sum_probs=57.7
Q ss_pred cccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCC-CchHHHHHHHHHhhHHHHHHHHHHHHH
Q 036987 23 LLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGK-KESKILKYLGCMCNPLSWVMEAAAIMA 85 (478)
Q Consensus 23 ~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (478)
||.++++++++.|++ |+++||.+|+++||+|.++.+ ++++|..|+++|.+||.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 799999999999995 999999999999999999665 578889999999999999999999986
No 37
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.93 E-value=2.7e-09 Score=80.94 Aligned_cols=53 Identities=34% Similarity=0.572 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 036987 37 CLTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALA 89 (478)
Q Consensus 37 ~Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 89 (478)
+||++||++|+++||+|.++.++ +++|..++++|.+|+.++|+++++++++++
T Consensus 10 GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 10 GLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 49999999999999999999876 788899999999999999999999999864
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.88 E-value=2.9e-09 Score=86.76 Aligned_cols=58 Identities=22% Similarity=0.218 Sum_probs=47.4
Q ss_pred CChhhHHHHHHcCCcc-----------eeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhcc
Q 036987 276 QVAIDGAIVSMLAGPK-----------KARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAH 334 (478)
Q Consensus 276 ~~p~~~ai~~~~~~~~-----------~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~ 334 (478)
++|.|.|++.++.... ..+++.+||+|++|+|+++++ .++.+++|+|||||.|+++|+
T Consensus 21 G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 21 GDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 5899999998874431 234899999999999999997 344567799999999999996
No 39
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.51 E-value=0.00026 Score=60.17 Aligned_cols=82 Identities=22% Similarity=0.290 Sum_probs=58.4
Q ss_pred EEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHh--hcCCEEEecChHHH
Q 036987 380 EFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELI--EKADGFAGLFPEHK 457 (478)
Q Consensus 380 ~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l--~~~~v~ar~~Pe~K 457 (478)
.+.+.++---.+=++++++|+.. ... +.-.+.+|+.. -+-.++++.. +..+|||...|+.|
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL--------~d~-V~i~IASgDr~--------gsl~~lae~~gi~~~rv~a~a~~e~K 82 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQEL--------HDM-VDIYIASGDRK--------GSLVQLAEFVGIPVERVFAGADPEMK 82 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHH--------HHh-heEEEecCCcc--------hHHHHHHHHcCCceeeeecccCHHHH
Confidence 56777777788889999999844 222 22222333322 1334445544 33468999999999
Q ss_pred HHHHHHHHhCCCEEEEeCCCC
Q 036987 458 YEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 458 ~~iV~~lq~~g~~V~m~GDGv 478 (478)
.++++.|++.++.|.|+|||.
T Consensus 83 ~~ii~eLkk~~~k~vmVGnGa 103 (152)
T COG4087 83 AKIIRELKKRYEKVVMVGNGA 103 (152)
T ss_pred HHHHHHhcCCCcEEEEecCCc
Confidence 999999999999999999994
No 40
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.90 E-value=0.29 Score=52.62 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=43.9
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecC-cEEEecccccccc
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGD-PLKIDRFQFCLWS 183 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~-~~~vde~~~~~~S 183 (478)
.+|||+..++|..-||.||||-++||+.-||.+.=+.++ .....|||+--|-
T Consensus 160 afRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~ddehiVL~~GDlfpp~ 212 (1354)
T KOG4383|consen 160 AFRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDDDEHIVLAEGDLFPPD 212 (1354)
T ss_pred HhccCeeeecceeEEEeccEEEecCCccccccccccCCCceeEeccCccCCCC
Confidence 689999999999999999999999999999999888774 3556666655443
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=86.42 E-value=1.8 Score=40.48 Aligned_cols=27 Identities=15% Similarity=-0.043 Sum_probs=23.6
Q ss_pred cChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 452 LFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 452 ~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
..|++|..+++.+++.|..+.|+|||.
T Consensus 128 ~~~~~K~~~l~~l~~~~~~~v~vGDs~ 154 (203)
T TIGR02137 128 RQKDPKRQSVIAFKSLYYRVIAAGDSY 154 (203)
T ss_pred cCcchHHHHHHHHHhhCCCEEEEeCCH
Confidence 457899999999998888899999984
No 42
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=68.24 E-value=6 Score=37.08 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 455 EHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 455 e~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
..|..+++.++.....+.|+|||.
T Consensus 143 ~~K~~~l~~~~~~~~~~i~iGDg~ 166 (214)
T TIGR03333 143 CCKPSLIRKLSEPNDYHIVIGDSV 166 (214)
T ss_pred CCHHHHHHHHhhcCCcEEEEeCCH
Confidence 359999999988778889999994
No 43
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=68.02 E-value=6.1 Score=35.79 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=44.2
Q ss_pred cCcHHHHH--------------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChH-H-
Q 036987 393 HDSAETIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPE-H- 456 (478)
Q Consensus 393 ~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe-~- 456 (478)
+++++.|+ +....+..+++.+|+...-.-+..+... ......++.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDN---------------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECT---------------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeec---------------ccceeeeeECCCCCC
Confidence 67778886 4456777888888875421111111000 012345666665 4
Q ss_pred -HHHHHHHH------HhCCCEEEEeCCCC
Q 036987 457 -KYEIVRRL------HDRKHISGMTGDGT 478 (478)
Q Consensus 457 -K~~iV~~l------q~~g~~V~m~GDGv 478 (478)
|...++.+ +.....+.++|||.
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~ 185 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSI 185 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSG
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCH
Confidence 99999999 34577999999984
No 44
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=66.33 E-value=13 Score=40.59 Aligned_cols=29 Identities=17% Similarity=0.326 Sum_probs=27.1
Q ss_pred EEEecChHHHHHHHHHHHhCCCEEEEeCC
Q 036987 448 GFAGLFPEHKYEIVRRLHDRKHISGMTGD 476 (478)
Q Consensus 448 v~ar~~Pe~K~~iV~~lq~~g~~V~m~GD 476 (478)
.|..++|+---++|+-+|+.|.+|+.+|-
T Consensus 971 LFTDcnpeamcEMIeIMQE~GEVtcclGS 999 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQENGEVTCCLGS 999 (1354)
T ss_pred eccCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 59999999999999999999999999884
No 45
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=61.18 E-value=19 Score=32.37 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhC-CCEEEEeCCCC
Q 036987 456 HKYEIVRRLHDR-KHISGMTGDGT 478 (478)
Q Consensus 456 ~K~~iV~~lq~~-g~~V~m~GDGv 478 (478)
.|.++++.+++. ...+.|+|||.
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~ 172 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGV 172 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCc
Confidence 599999999887 78899999994
No 46
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=54.97 E-value=7.5 Score=30.81 Aligned_cols=22 Identities=14% Similarity=0.441 Sum_probs=16.8
Q ss_pred EeCCCCCcCcEEEE-cCCCeeec
Q 036987 141 EDAAEMVPGDIISI-KLGEIVSA 162 (478)
Q Consensus 141 i~~~~lv~GDiv~v-~~G~~IPa 162 (478)
+.-.+|.+||.|.| ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 45678999999998 69999994
No 47
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=54.24 E-value=6.3 Score=35.68 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.8
Q ss_pred EEecCccccccCch
Q 036987 246 LCSDKTGTLTLNKL 259 (478)
Q Consensus 246 i~~DKTGTLT~~~~ 259 (478)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 48
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=52.98 E-value=13 Score=33.24 Aligned_cols=27 Identities=22% Similarity=0.181 Sum_probs=20.5
Q ss_pred cChHHHHHHHHHHHhC-C---CEEEEeCCCC
Q 036987 452 LFPEHKYEIVRRLHDR-K---HISGMTGDGT 478 (478)
Q Consensus 452 ~~Pe~K~~iV~~lq~~-g---~~V~m~GDGv 478 (478)
..+..|..+++.++++ | ..+.|+|||.
T Consensus 138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~ 168 (177)
T TIGR01488 138 PEGECKGKVLKELLEESKITLKKIIAVGDSV 168 (177)
T ss_pred CCcchHHHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 4568899999987654 2 3589999984
No 49
>PRK11507 ribosome-associated protein; Provisional
Probab=51.19 E-value=19 Score=27.62 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=23.2
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcC
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKL 156 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~ 156 (478)
|..||....-.-+.|.|||+|.+.-
T Consensus 39 V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 39 VKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred eEECCEEecccCCCCCCCCEEEECC
Confidence 9999999999999999999999854
No 50
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=50.73 E-value=15 Score=34.46 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCCCEEEEeCCCC
Q 036987 456 HKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 456 ~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.|..+++.++.....+.|+|||.
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~ 170 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSI 170 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCH
Confidence 48899998887777899999983
No 51
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=48.82 E-value=13 Score=28.11 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=15.6
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcCCC
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKLGE 158 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~G~ 158 (478)
|..||....-.-..|.+||+|.+ .|.
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HEETTB----SS----SSEEEEE-TTE
T ss_pred eEECCEEccccCCcCCCCCEEEE-CCE
Confidence 88999999999999999999999 443
No 52
>PF15584 Imm44: Immunity protein 44
Probab=48.76 E-value=7.9 Score=31.10 Aligned_cols=19 Identities=26% Similarity=0.309 Sum_probs=16.1
Q ss_pred cCcEEEEcCCCeeeccEEE
Q 036987 148 PGDIISIKLGEIVSADARL 166 (478)
Q Consensus 148 ~GDiv~v~~G~~IPaD~~v 166 (478)
+.+-..|+.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556789999999999996
No 53
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=47.29 E-value=39 Score=27.79 Aligned_cols=28 Identities=25% Similarity=0.452 Sum_probs=24.1
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcCCCee
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKLGEIV 160 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~G~~I 160 (478)
|.-||+.. -++.++++||+|.|.-|...
T Consensus 36 V~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 36 VKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred EEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 77788777 89999999999999988763
No 54
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=45.31 E-value=83 Score=28.53 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=52.7
Q ss_pred HHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccc
Q 036987 345 IDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSS 424 (478)
Q Consensus 345 ~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~ 424 (478)
.+.+..+|.+.+.+-.++ +++.. . -...+++.++-.. -.++.||.-.+.+
T Consensus 20 ~~~L~~~Gikgvi~DlDN-----------------TLv~w---d--~~~~tpe~~~W~~-----e~k~~gi~v~vvS--- 69 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-----------------TLVPW---D--NPDATPELRAWLA-----ELKEAGIKVVVVS--- 69 (175)
T ss_pred HHHHHHcCCcEEEEeccC-----------------ceecc---c--CCCCCHHHHHHHH-----HHHhcCCEEEEEe---
Confidence 456778899988876655 33322 1 1234455554111 1278888654333
Q ss_pred cccccccccCCcchHHHHhhcCC---EEEecChHHHHHHHHHHHhCC---CEEEEeCCC
Q 036987 425 LLRESKDETNSALPIDELIEKAD---GFAGLFPEHKYEIVRRLHDRK---HISGMTGDG 477 (478)
Q Consensus 425 ~~g~~~~~~~~~~~~~~~l~~~~---v~ar~~Pe~K~~iV~~lq~~g---~~V~m~GDG 477 (478)
.++...++...+... ++-...|-- ..+-+++++.+ .-|+|+||-
T Consensus 70 --------Nn~e~RV~~~~~~l~v~fi~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDq 119 (175)
T COG2179 70 --------NNKESRVARAAEKLGVPFIYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQ 119 (175)
T ss_pred --------CCCHHHHHhhhhhcCCceeecccCccH-HHHHHHHHHcCCChhHEEEEcch
Confidence 123444444444332 344445654 46778888775 459999993
No 55
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=44.98 E-value=15 Score=33.69 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 455 EHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 455 e~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.+|...|+.|++....+-||||||
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsv 169 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSV 169 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCc
Confidence 469999999999999999999997
No 56
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=42.83 E-value=20 Score=33.26 Aligned_cols=23 Identities=30% Similarity=0.401 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhC--CCEEEEeCCCC
Q 036987 456 HKYEIVRRLHDR--KHISGMTGDGT 478 (478)
Q Consensus 456 ~K~~iV~~lq~~--g~~V~m~GDGv 478 (478)
-|.++|+.+++. -..++|+|||-
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGa 183 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGA 183 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCc
Confidence 699999999974 24789999993
No 57
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=42.56 E-value=65 Score=30.28 Aligned_cols=76 Identities=12% Similarity=0.056 Sum_probs=44.1
Q ss_pred CCCCcCcHHHHHH--------------hHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecC-
Q 036987 389 DPPHHDSAETISD--------------QIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLF- 453 (478)
Q Consensus 389 D~lR~~~~~~I~D--------------~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~- 453 (478)
.+++|++.+.++. ...-+..+|+++|+.....+.-.. .. . .+ .-+|.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~-----------~d-G-~l-tG~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEI-----------DD-G-KL-TGRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEE-----------eC-C-EE-eceeeeeecC
Confidence 4589999999982 234566777777775432110000 00 0 00 113444444
Q ss_pred hHHHHHHHHHHHh-CCCE---EEEeCCCC
Q 036987 454 PEHKYEIVRRLHD-RKHI---SGMTGDGT 478 (478)
Q Consensus 454 Pe~K~~iV~~lq~-~g~~---V~m~GDGv 478 (478)
.+.|...++.+.+ .|.. +.++|||.
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~ 170 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSA 170 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCch
Confidence 4789998876655 4654 88999983
No 58
>PRK04980 hypothetical protein; Provisional
Probab=41.57 E-value=38 Score=28.00 Aligned_cols=51 Identities=16% Similarity=0.306 Sum_probs=34.6
Q ss_pred CCCCCcCcEEEEc--CCCeeeccEEEEecCcEEEecccccc-ccccccCCceeecC
Q 036987 143 AAEMVPGDIISIK--LGEIVSADARLVEGDPLKIDRFQFCL-WSALTGESLPVTKN 195 (478)
Q Consensus 143 ~~~lv~GDiv~v~--~G~~IPaD~~vl~g~~~~vde~~~~~-~S~LTGEs~pv~K~ 195 (478)
-...+|||++.|. .+...-|+..+++-....+|+ ++. -+..-|+|.+--|.
T Consensus 29 e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~e--Lte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 29 ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDE--LNEKHAEQENMTLPELKQ 82 (102)
T ss_pred ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhh--CCHHHHHHhCCCHHHHHH
Confidence 3458999999998 889999999999875556555 110 13344565554443
No 59
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=39.63 E-value=40 Score=30.62 Aligned_cols=16 Identities=31% Similarity=0.299 Sum_probs=13.8
Q ss_pred eeEEEecCccccccCc
Q 036987 243 MDVLCSDKTGTLTLNK 258 (478)
Q Consensus 243 v~~i~~DKTGTLT~~~ 258 (478)
++.+|||==|||+...
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 6789999999999854
No 60
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=39.20 E-value=2.8e+02 Score=24.63 Aligned_cols=62 Identities=13% Similarity=0.070 Sum_probs=33.5
Q ss_pred CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe------E----eeCCeEEEEeCCCCCcCcEEEEcC
Q 036987 95 DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS------Y----LRDGRWNEEDAAEMVPGDIISIKL 156 (478)
Q Consensus 95 ~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~------v----~r~g~~~~i~~~~lv~GDiv~v~~ 156 (478)
..-|-+..+|++ ++..++--++++...+...+-...+ | --+-....+++..+.-|-||.+..
T Consensus 43 ~tKyRDL~II~~L~ll~l~giq~~~y~~~~~~~~q~~~~~~fi~~vA~~~~V~~~~v~VNst~l~dG~iVki~~ 116 (149)
T PF11694_consen 43 DTKYRDLSIIALLLLLLLIGIQYSDYQQNQNQHSQSSQMVHFIESVAKDLGVSKEEVYVNSTALTDGMIVKIGD 116 (149)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHhCCChheEEEecccccCCeEEEECC
Confidence 445667666655 3333334445555444332222221 1 113456788888888888887773
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=38.52 E-value=28 Score=31.90 Aligned_cols=26 Identities=23% Similarity=0.201 Sum_probs=22.6
Q ss_pred ChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 453 FPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 453 ~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.|+.|...++.++..+..+.|+|||.
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~ 154 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSY 154 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCH
Confidence 37889999999988888999999983
No 62
>PF00356 LacI: Bacterial regulatory proteins, lacI family; InterPro: IPR000843 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. One such family groups together a range of proteins, including ascG, ccpA, cytR, ebgR, fruR, galR, galS, lacI, malI, opnR, purF, rafR, rbtR and scrR [, ]. Within this family, the HTH motif is situated towards the N terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 3KJX_C 1ZAY_A 1VPW_A 2PUA_A 1QQA_A 1PNR_A 1JFT_A 1QP4_A 2PUD_A 1JH9_A ....
Probab=37.80 E-value=38 Score=23.55 Aligned_cols=42 Identities=12% Similarity=0.212 Sum_probs=30.5
Q ss_pred HHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCE
Q 036987 407 KETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHI 470 (478)
Q Consensus 407 ~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~ 470 (478)
..||+.+|+. ...+...+... .+++|+-+.+|.+..++.||.
T Consensus 3 ~dIA~~agvS-------------------~~TVSr~ln~~---~~vs~~tr~rI~~~a~~lgY~ 44 (46)
T PF00356_consen 3 KDIAREAGVS-------------------KSTVSRVLNGP---PRVSEETRERILEAAEELGYR 44 (46)
T ss_dssp HHHHHHHTSS-------------------HHHHHHHHTTC---SSSTHHHHHHHHHHHHHHTB-
T ss_pred HHHHHHHCcC-------------------HHHHHHHHhCC---CCCCHHHHHHHHHHHHHHCCC
Confidence 4678888873 33445555443 688999999999999988864
No 63
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=37.02 E-value=48 Score=36.56 Aligned_cols=63 Identities=17% Similarity=0.259 Sum_probs=40.8
Q ss_pred EeCCCCCcCcEEEE-cCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe
Q 036987 141 EDAAEMVPGDIISI-KLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN 218 (478)
Q Consensus 141 i~~~~lv~GDiv~v-~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t 218 (478)
|.-.+|.+||-|.| ++||+||-=. .|.. .-=+|+..|+. .|..+..+||.+......+...++
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~--------~Vv~------e~R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~ 426 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVV--------GVVL------EKRPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCT 426 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCccee--------eeec------ccCCCCCCCCC-CCCCCCCCCCeeEeccCceeEecC
Confidence 45689999999999 5999999422 2222 23345555544 566677899998874444444443
No 64
>TIGR00967 3a0501s007 preprotein translocase, SecY subunit.
Probab=34.17 E-value=3.5e+02 Score=28.22 Aligned_cols=88 Identities=15% Similarity=0.107 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHhcCCCCC-CchhHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLS----WVMEAAAIMAIALAHGGGKD-PDYHDFIGIVIIINSTT 112 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~ 112 (478)
++.+|+++++++-|.=-.-..+-+...+.++.....+. +++.+.+++..+++...+-. ...+-+..+++++....
T Consensus 316 ~~p~~iA~~lkk~g~~IpGiRpG~~T~~yL~~~i~~~t~~Gai~l~~ia~~p~l~~~~~~~~~~~~~ggtsiLI~Vgv~~ 395 (410)
T TIGR00967 316 LNPEDMAKNLKKQGMFIPGIRPGKMTEKYLKRVIPRLTFVGSLFLGLIALLPNFLGAIGGLPTSKGLGGTSLLIVVGVAI 395 (410)
T ss_pred cCHHHHHHHHHHCCCcCCCcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCchHhHHHHHHHHH
Confidence 89999999999977543322222222333333333222 33444444444443211110 01233667777888889
Q ss_pred HHHHHHHHHHHHH
Q 036987 113 SFKEENNAGNAAA 125 (478)
Q Consensus 113 ~~~~~~~~~~~~~ 125 (478)
+.+++.++++..+
T Consensus 396 ~~~~qi~~~~~~~ 408 (410)
T TIGR00967 396 DTYKQLESYLISR 408 (410)
T ss_pred HHHHHHHHHHHHh
Confidence 9999888876544
No 65
>COG5547 Small integral membrane protein [Function unknown]
Probab=34.13 E-value=1.9e+02 Score=21.23 Aligned_cols=47 Identities=13% Similarity=0.260 Sum_probs=22.8
Q ss_pred HHHHHhhHHH--HHHHHHHHHHHHHhcCCCCCCchhHHHHHHH-HHHHHHHHHHHHH
Q 036987 66 YLGCMCNPLS--WVMEAAAIMAIALAHGGGKDPDYHDFIGIVI-IINSTTSFKEENN 119 (478)
Q Consensus 66 ~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 119 (478)
++++|+-|.. ++.++.|++-+.++ .|-...++++ .+.....++.++.
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwKtilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWKTILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5677777765 33333444434443 3433333333 5555556655543
No 66
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=34.12 E-value=49 Score=30.68 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=19.2
Q ss_pred HHhhhcceeEEEecCccccccCc
Q 036987 236 AIEEMAGMDVLCSDKTGTLTLNK 258 (478)
Q Consensus 236 ~~e~lg~v~~i~~DKTGTLT~~~ 258 (478)
+-+.+.....++||==|||+...
T Consensus 7 ~~~~~~~~k~iiFD~DGTL~~~~ 29 (219)
T TIGR00338 7 LSPLLRSKKLVVFDMDSTLINAE 29 (219)
T ss_pred chhhhccCCEEEEeCcccCCCch
Confidence 45567888999999999999864
No 67
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=31.89 E-value=74 Score=25.27 Aligned_cols=14 Identities=21% Similarity=0.185 Sum_probs=8.6
Q ss_pred CCCcCcEEEEcCCC
Q 036987 145 EMVPGDIISIKLGE 158 (478)
Q Consensus 145 ~lv~GDiv~v~~G~ 158 (478)
+|+|||-|....|-
T Consensus 37 ~L~~Gd~VvT~gGi 50 (84)
T TIGR00739 37 SLKKGDKVLTIGGI 50 (84)
T ss_pred hCCCCCEEEECCCe
Confidence 46666666666653
No 68
>PLN02954 phosphoserine phosphatase
Probab=30.80 E-value=73 Score=29.61 Aligned_cols=73 Identities=18% Similarity=0.188 Sum_probs=0.0
Q ss_pred CCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcC--CEEEe----------------
Q 036987 390 PPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKA--DGFAG---------------- 451 (478)
Q Consensus 390 ~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~--~v~ar---------------- 451 (478)
+++|+++++++.. ++.|+...+.|+..-. ..+.+.+.++.. .+|+.
T Consensus 84 ~l~pg~~e~l~~l--------~~~g~~~~IvS~~~~~--------~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKL--------RARGTDVYLVSGGFRQ--------MIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHH--------HHCCCEEEEECCCcHH--------HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC
Q ss_pred ---cChHHHHHHHHHHHhC--CCEEEEeCCCC
Q 036987 452 ---LFPEHKYEIVRRLHDR--KHISGMTGDGT 478 (478)
Q Consensus 452 ---~~Pe~K~~iV~~lq~~--g~~V~m~GDGv 478 (478)
..+..|...++.+.++ ...+.|+||+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~ 179 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGA 179 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCH
No 69
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=29.52 E-value=35 Score=24.63 Aligned_cols=12 Identities=33% Similarity=0.642 Sum_probs=10.5
Q ss_pred CcCcEEEEcCCC
Q 036987 147 VPGDIISIKLGE 158 (478)
Q Consensus 147 v~GDiv~v~~G~ 158 (478)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999984
No 70
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=29.22 E-value=1e+02 Score=23.44 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=20.1
Q ss_pred EeeCCeEEEEe---CCCCCcCcEEEEcCCCe
Q 036987 132 YLRDGRWNEED---AAEMVPGDIISIKLGEI 159 (478)
Q Consensus 132 v~r~g~~~~i~---~~~lv~GDiv~v~~G~~ 159 (478)
|-.+|..++++ ..++.|||-|.++.|..
T Consensus 21 v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 21 VDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp EEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred EEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 55677778775 45688999999999954
No 71
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=28.69 E-value=4.1e+02 Score=23.47 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=15.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 036987 100 DFIGIVI-IINSTTSFKEENNAGNAAAA 126 (478)
Q Consensus 100 ~~~~i~~-~~~~~~~~~~~~~~~~~~~~ 126 (478)
+.+.++. ++.....|+--++-.|..++
T Consensus 103 e~~~~~~~~lg~~l~fl~~r~ysRkl~~ 130 (150)
T COG3086 103 ELIVIFGAFLGLALGFLLARRYSRKLAK 130 (150)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444444 66666677666655554443
No 72
>PF13309 HTH_22: HTH domain
Probab=28.43 E-value=51 Score=24.62 Aligned_cols=21 Identities=38% Similarity=0.368 Sum_probs=18.7
Q ss_pred EEecChHHHHHHHHHHHhCCC
Q 036987 449 FAGLFPEHKYEIVRRLHDRKH 469 (478)
Q Consensus 449 ~ar~~Pe~K~~iV~~lq~~g~ 469 (478)
..+++.++|.++|+.|.++|.
T Consensus 18 ~~~l~~~~k~~iV~~L~~~G~ 38 (64)
T PF13309_consen 18 PSRLSKEEKKEIVRQLYEKGI 38 (64)
T ss_pred hhhCCHHHHHHHHHHHHHCCC
Confidence 478899999999999999884
No 73
>PRK09204 secY preprotein translocase subunit SecY; Reviewed
Probab=26.67 E-value=6.8e+02 Score=26.26 Aligned_cols=89 Identities=13% Similarity=0.160 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLS----WVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTS 113 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 113 (478)
++.+|.++++++-|.=-.-..+-+...++++...+.+. +++.+.+++..+++...+. ...+-+..+++++....+
T Consensus 330 ~~p~~iAe~l~k~g~~IpGiRpG~~T~~yL~~~i~r~t~~Ga~~l~~ia~~p~~~~~~~~~-~~~~ggTslLI~Vgv~l~ 408 (426)
T PRK09204 330 FNPEEIAENLKKSGGFIPGIRPGEQTAEYLDKVLTRLTLVGAIYLAFIALLPEILQNALGV-PFYFGGTSLLIVVGVALD 408 (426)
T ss_pred cCHHHHHHHHHHCCCcccCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHcCc-ccccchHHHHHHHHHHHH
Confidence 89999999999877543322221223333333322222 3344444444444321111 223456677778888899
Q ss_pred HHHHHHHHHHHHHh
Q 036987 114 FKEENNAGNAAAAL 127 (478)
Q Consensus 114 ~~~~~~~~~~~~~l 127 (478)
.+++.+++...++-
T Consensus 409 ~~~qi~~~~~~~~Y 422 (426)
T PRK09204 409 TMKQIESQLMSRQY 422 (426)
T ss_pred HHHHHHHHHHHHhh
Confidence 99988887665543
No 74
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=26.33 E-value=1.4e+02 Score=24.80 Aligned_cols=13 Identities=23% Similarity=0.401 Sum_probs=7.3
Q ss_pred CCCcCcEEEEcCC
Q 036987 145 EMVPGDIISIKLG 157 (478)
Q Consensus 145 ~lv~GDiv~v~~G 157 (478)
+|++||-|....|
T Consensus 52 ~Lk~Gd~VvT~gG 64 (106)
T PRK05585 52 SLAKGDEVVTNGG 64 (106)
T ss_pred hcCCCCEEEECCC
Confidence 4556666555555
No 75
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=25.89 E-value=1.2e+02 Score=24.83 Aligned_cols=13 Identities=23% Similarity=0.281 Sum_probs=7.4
Q ss_pred CCCcCcEEEEcCC
Q 036987 145 EMVPGDIISIKLG 157 (478)
Q Consensus 145 ~lv~GDiv~v~~G 157 (478)
+|++||-|....|
T Consensus 43 sL~kGD~VvT~gG 55 (97)
T COG1862 43 SLKKGDEVVTIGG 55 (97)
T ss_pred hccCCCEEEEcCC
Confidence 4556666655555
No 76
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=25.87 E-value=4.8e+02 Score=28.43 Aligned_cols=85 Identities=11% Similarity=0.081 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCCCccCCCCchHHHHH----HHHHhhHHH-------HHHHHHHHHHHHHhcCCCCCCchhHHHHHHH---
Q 036987 41 DDVKERLNLFGYNRLEGKKESKILKY----LGCMCNPLS-------WVMEAAAIMAIALAHGGGKDPDYHDFIGIVI--- 106 (478)
Q Consensus 41 ~~v~~r~~~~G~N~~~~~~~~~~~~~----~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~--- 106 (478)
+++-++..+-|+|.+..++...|-.+ .+++.+.+. ...++..++.+++. ..+|..++++++
T Consensus 77 ~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~-----~~~w~aalIllit~P 151 (559)
T COG4988 77 QLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIF-----FFNWAAALILLITAP 151 (559)
T ss_pred HHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHH
Confidence 45566777889988887776666333 233333322 11222222212111 015665555554
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhhcC
Q 036987 107 ---IINSTTSFKEENNAGNAAAALMAQ 130 (478)
Q Consensus 107 ---~~~~~~~~~~~~~~~~~~~~l~~~ 130 (478)
++..++.+.....+++....+.++
T Consensus 152 lIPlfMilvg~~a~~~s~~~~~~~~~l 178 (559)
T COG4988 152 LIPLFMILVGLAAKDASEKQFSALARL 178 (559)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 556666676667777777666654
No 77
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=25.80 E-value=57 Score=25.80 Aligned_cols=24 Identities=25% Similarity=0.309 Sum_probs=19.2
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEc
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIK 155 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~ 155 (478)
+.+++....+.+++|.+||.|.+.
T Consensus 76 ~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 76 VRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EecCCcEEEEEHHHCCCCCEEEec
Confidence 445566678999999999999874
No 78
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=25.77 E-value=1.2e+02 Score=23.87 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=0.4
Q ss_pred CCCCcCcEEEEcCC
Q 036987 144 AEMVPGDIISIKLG 157 (478)
Q Consensus 144 ~~lv~GDiv~v~~G 157 (478)
++|+|||-|....|
T Consensus 35 ~~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 35 ASLKPGDEVVTIGG 48 (82)
T ss_dssp G-------------
T ss_pred HcCCCCCEEEECCc
Confidence 45667777666665
No 79
>TIGR02988 YaaA_near_RecF S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage.
Probab=25.51 E-value=96 Score=22.43 Aligned_cols=23 Identities=30% Similarity=0.645 Sum_probs=20.3
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEE
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISI 154 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v 154 (478)
|.-||+...-+..-|.+||.|.|
T Consensus 36 V~VNg~~~~~~~~~l~~Gd~v~i 58 (59)
T TIGR02988 36 VLVNGELENRRGKKLYPGDVIEI 58 (59)
T ss_pred EEECCEEccCCCCCCCCCCEEEe
Confidence 88899987778999999999976
No 80
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=25.28 E-value=4.9e+02 Score=23.59 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=25.3
Q ss_pred ccccC-CHHHHHHHcCC--CCHHHHHHHHHhcCCCccCCCCchHHHHH
Q 036987 22 VLLDI-PIEEVFENLKC--LTSDDVKERLNLFGYNRLEGKKESKILKY 66 (478)
Q Consensus 22 ~~~~~-~~~~~~~~l~~--Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~ 66 (478)
|.+++ .++++.+++.. ++-+|+.+|+++--... ++++.|..+
T Consensus 63 nl~~l~~v~~l~~~~~~~~~~~~ea~~~L~~I~~~~---~~y~~~~~~ 107 (193)
T PF06738_consen 63 NLDKLAAVNRLSRRIVAGQLSLEEAIERLDEIDREP---PRYPPWLVI 107 (193)
T ss_pred CHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhCC---CCCCHHHHH
Confidence 44443 25666666643 99999999998843221 235655443
No 81
>PRK12907 secY preprotein translocase subunit SecY; Reviewed
Probab=24.55 E-value=6.5e+02 Score=26.55 Aligned_cols=89 Identities=8% Similarity=-0.008 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHH----HHhhHHHHHHHHHHHHHHHHhcC-CCCCCchhHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLG----CMCNPLSWVMEAAAIMAIALAHG-GGKDPDYHDFIGIVIIINSTT 112 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 112 (478)
++.+|.++.+++.|.=-.-..+-+....+++ .+.-+=.+++.+.|++..++... .-....++-+..+++++....
T Consensus 332 ~nP~~iAenL~k~G~~IPGiRPGk~T~~yL~~~i~rlt~~Gai~L~~ia~lP~i~~~~~~~~~~~~~gGTslLI~VgV~l 411 (434)
T PRK12907 332 VNPEQMAENLKKQNGYVPGIRPGKSTEQYVTKILYRLTFIGAIFLGAISILPLVFTKIATLPPSAQIGGTSLLIIVGVAL 411 (434)
T ss_pred cCHHHHHHHHHHCCCcCCCcCCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCcccccchhhhhhhHHHHH
Confidence 8999999999998854332222122233333 33222224444445444444311 101112244567777788888
Q ss_pred HHHHHHHHHHHHHH
Q 036987 113 SFKEENNAGNAAAA 126 (478)
Q Consensus 113 ~~~~~~~~~~~~~~ 126 (478)
+.+++.+++...++
T Consensus 412 dt~~qi~s~l~~~~ 425 (434)
T PRK12907 412 ETMKTLESQLVKRH 425 (434)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777665543
No 82
>COG3411 Ferredoxin [Energy production and conversion]
Probab=24.15 E-value=97 Score=23.28 Aligned_cols=25 Identities=16% Similarity=0.012 Sum_probs=22.4
Q ss_pred CEEEecChHHHHHHHHHHHhCCCEE
Q 036987 447 DGFAGLFPEHKYEIVRRLHDRKHIS 471 (478)
Q Consensus 447 ~v~ar~~Pe~K~~iV~~lq~~g~~V 471 (478)
.+|.|++|++=.+||+..-..|..|
T Consensus 27 vWY~~V~p~~a~rIv~~hl~~Gr~V 51 (64)
T COG3411 27 VWYTRVDPEDARRIVQSHLLGGRPV 51 (64)
T ss_pred eeEeccCHHHHHHHHHHHHhCCCcc
Confidence 5799999999999999998888766
No 83
>COG0201 SecY Preprotein translocase subunit SecY [Intracellular trafficking and secretion]
Probab=23.66 E-value=3.4e+02 Score=28.64 Aligned_cols=87 Identities=18% Similarity=0.187 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLS----WVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTS 113 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 113 (478)
.+.+|.++++++.|.=-.-..+.+...+.++...+.+. +++-+.+++..++....+.+ .++-+..+++++....+
T Consensus 335 ~np~~~A~~lkksG~~IPGiRpg~~te~yL~rvi~rlt~~Ga~~l~~iailp~l~~~~~~~~-~~~gGTslLI~V~V~l~ 413 (436)
T COG0201 335 FNPEEIAENLKKSGGFIPGIRPGKDTEKYLNRVIPRLTFIGALFLGLIAILPELLGTAGGVP-FYFGGTSLLIVVGVALD 413 (436)
T ss_pred cCHHHHHHHHHHcCCcCCCcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCeeeeeehHHHHH
Confidence 66999999999999754433323333344333333332 23444444444444322222 45556677778888888
Q ss_pred HHHHHHHHHHHH
Q 036987 114 FKEENNAGNAAA 125 (478)
Q Consensus 114 ~~~~~~~~~~~~ 125 (478)
++++.+++...+
T Consensus 414 ~~~qi~~~l~~~ 425 (436)
T COG0201 414 TYEQIEAELLME 425 (436)
T ss_pred HHHHHHHHHHHh
Confidence 888887776554
No 84
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=23.34 E-value=2.7e+02 Score=25.89 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeEeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEec
Q 036987 105 VIIINSTTSFKEENNAGNAAAALMAQSYLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEG 169 (478)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g 169 (478)
++++..+..+++.+...+..+.++++.-....+...+-- -|....+...+.+|-|.+.++.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r----~~~~~~i~~~~L~~GDiI~l~~ 62 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR----DGRWQKIPSSELVPGDIIILKA 62 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE----TTEEEEEEGGGT-TTSEEEEET
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe----ccccccchHhhccceeeeeccc
Confidence 457777888888888888888888652222333233332 3789999999999999998875
No 85
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=23.09 E-value=2.5e+02 Score=24.65 Aligned_cols=15 Identities=13% Similarity=-0.099 Sum_probs=10.3
Q ss_pred HhcCCCccCCCCchH
Q 036987 48 NLFGYNRLEGKKESK 62 (478)
Q Consensus 48 ~~~G~N~~~~~~~~~ 62 (478)
+.||....+...+++
T Consensus 12 ~~y~ecls~~~~psf 26 (189)
T PF05568_consen 12 RHYGECLSPVTPPSF 26 (189)
T ss_pred hhhhhhcCCCCCccH
Confidence 567777777666665
No 86
>CHL00161 secY preprotein translocase subunit SecY; Validated
Probab=21.77 E-value=9.2e+02 Score=25.19 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHH----HHHHHHHHHHHHHhcCCCCCCch-hHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLS----WVMEAAAIMAIALAHGGGKDPDY-HDFIGIVIIINSTT 112 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 112 (478)
++.+|+++++++.|.=-.-..+-+.-.++++.....+. +++.+.+++..++....+....+ +-+..+++++....
T Consensus 318 ~~p~~iA~~Lkk~g~~IpGvRpG~~T~~yL~~~i~~~t~~Ga~~l~~la~~p~l~~~~~~~~~~~~~ggtslLI~Vgv~~ 397 (417)
T CHL00161 318 LNPKDISENLQKMAVSIPGIRPGKATTKYLKKTLNRLTLLGALFLAFIALLPNLIESVLNLSVFKGLGTTSLLILVGVAI 397 (417)
T ss_pred cCHHHHHHHHHHCCCcCCCcCCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCcccccccchhhhhhhHHHHH
Confidence 89999999999877543322221122333333222222 33333344433332111111122 34567777888888
Q ss_pred HHHHHHHHHHHHHHh
Q 036987 113 SFKEENNAGNAAAAL 127 (478)
Q Consensus 113 ~~~~~~~~~~~~~~l 127 (478)
+.+++.+++...++-
T Consensus 398 ~~~~qi~a~~~~~~Y 412 (417)
T CHL00161 398 DTSRQIQTYLISNNY 412 (417)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888888877655543
No 87
>smart00354 HTH_LACI helix_turn _helix lactose operon repressor.
Probab=21.44 E-value=1.6e+02 Score=22.15 Aligned_cols=20 Identities=5% Similarity=0.112 Sum_probs=13.9
Q ss_pred EecChHHHHHHHHHHHhCCC
Q 036987 450 AGLFPEHKYEIVRRLHDRKH 469 (478)
Q Consensus 450 ar~~Pe~K~~iV~~lq~~g~ 469 (478)
.+++|+-+.++.+.+++.|+
T Consensus 25 ~~v~~~t~~~i~~~~~~~gy 44 (70)
T smart00354 25 GRVSEETREKVLAAMEELGY 44 (70)
T ss_pred CCCCHHHHHHHHHHHHHhCC
Confidence 34567777777777777665
No 88
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=21.33 E-value=1.8e+02 Score=24.41 Aligned_cols=11 Identities=27% Similarity=0.549 Sum_probs=4.3
Q ss_pred CCcCcEEEEcC
Q 036987 146 MVPGDIISIKL 156 (478)
Q Consensus 146 lv~GDiv~v~~ 156 (478)
|+|||-|.-..
T Consensus 39 Lk~GD~VvT~g 49 (109)
T PRK05886 39 LQPGDRVHTTS 49 (109)
T ss_pred cCCCCEEEECC
Confidence 33444443333
No 89
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair]
Probab=21.21 E-value=1e+02 Score=23.90 Aligned_cols=25 Identities=16% Similarity=0.274 Sum_probs=23.2
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcC
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKL 156 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~ 156 (478)
|+.||....-.-..|..||+|.+.-
T Consensus 39 V~vNGe~EtRRgkKlr~gd~V~i~~ 63 (73)
T COG2501 39 VKVNGEVETRRGKKLRDGDVVEIPG 63 (73)
T ss_pred EEECCeeeeccCCEeecCCEEEECC
Confidence 9999999999999999999999864
No 90
>smart00532 LIGANc Ligase N family.
Probab=21.15 E-value=45 Score=35.20 Aligned_cols=22 Identities=18% Similarity=0.510 Sum_probs=19.3
Q ss_pred EeCCCCCcCcEEEE-cCCCeeec
Q 036987 141 EDAAEMVPGDIISI-KLGEIVSA 162 (478)
Q Consensus 141 i~~~~lv~GDiv~v-~~G~~IPa 162 (478)
|...+|.+||.|.| ++||+||.
T Consensus 358 i~~~~i~iGd~V~V~raGdVIP~ 380 (441)
T smart00532 358 IEEKDIRIGDTVVVRKAGDVIPK 380 (441)
T ss_pred HHHcCCCCCCEEEEEECCCcCcc
Confidence 56789999999999 59999995
No 91
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=21.07 E-value=1.2e+02 Score=24.43 Aligned_cols=24 Identities=21% Similarity=0.223 Sum_probs=20.2
Q ss_pred EecChHHHHHHHHHHHhCCCEEEEe
Q 036987 450 AGLFPEHKYEIVRRLHDRKHISGMT 474 (478)
Q Consensus 450 ar~~Pe~K~~iV~~lq~~g~~V~m~ 474 (478)
.+++|+||..+ +.|++.|..|.+|
T Consensus 73 ~~ls~~Q~~~~-~~l~~~G~~v~V~ 96 (100)
T PF08774_consen 73 DRLSPNQKEWI-DKLREAGFRVAVC 96 (100)
T ss_pred CCcCHHHHHHH-HHHHHCCCEEEEE
Confidence 78899999888 7788889888765
No 92
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=20.90 E-value=1.2e+02 Score=30.49 Aligned_cols=25 Identities=24% Similarity=0.369 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHhC-C---CEEEEeCCCC
Q 036987 454 PEHKYEIVRRLHDR-K---HISGMTGDGT 478 (478)
Q Consensus 454 Pe~K~~iV~~lq~~-g---~~V~m~GDGv 478 (478)
.+.|.+.++.+.++ | ..+.|+|||.
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~ 274 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGA 274 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCH
Confidence 46799988887654 4 4689999983
No 93
>PRK08568 preprotein translocase subunit SecY; Reviewed
Probab=20.13 E-value=7.2e+02 Score=26.42 Aligned_cols=82 Identities=16% Similarity=0.129 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHH----HHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLS----WVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTT 112 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 112 (478)
++.+|+++.+++-|.=-.-..+ ++...+.++...+.+. +++.+.+++..+++. +.-+..+++++....
T Consensus 366 ~~p~diAe~Lkk~g~~IpGiRpG~~~t~~yL~~~i~r~t~~Ga~~l~~ia~lp~~~~~-------~g~gtslLI~Vgv~~ 438 (462)
T PRK08568 366 LDPKTQARQLQNSGMQIPGFRRNPKVIEKVLERYIPPVTVIGGAIVGLLAVLADLLGA-------LGGGTGLLLTVSIVY 438 (462)
T ss_pred CCHHHHHHHHHHcCCcccCcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCchhhhhhHHHHH
Confidence 7899999999997754332221 1123333333333332 344444455444442 223556666777778
Q ss_pred HHHHHHHHHHHHHH
Q 036987 113 SFKEENNAGNAAAA 126 (478)
Q Consensus 113 ~~~~~~~~~~~~~~ 126 (478)
+.+++.++++..++
T Consensus 439 ~~~~qi~~~~~~~~ 452 (462)
T PRK08568 439 QLYEEIAREQLMEM 452 (462)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777665544
No 94
>PRK06788 flagellar motor switch protein; Validated
Probab=20.08 E-value=38 Score=28.87 Aligned_cols=39 Identities=15% Similarity=0.273 Sum_probs=28.1
Q ss_pred EEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEec
Q 036987 138 WNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDR 176 (478)
Q Consensus 138 ~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde 176 (478)
...+...++-++|++.++.||+||.|-.+=+-=.+.++.
T Consensus 39 ~aeLG~t~ltl~DlL~L~vGDVI~Ldk~~~dpv~v~Vng 77 (119)
T PRK06788 39 GVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSN 77 (119)
T ss_pred EEEEecceecHHHHhCCCCCCEEEeCCcCCCCEEEEECC
Confidence 356778889999999999999999886643322344444
Done!