Query 036987
Match_columns 478
No_of_seqs 231 out of 2134
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:18:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b8c_A ATPase 2, plasma membra 100.0 1.7E-81 5.9E-86 700.6 0.2 450 19-478 10-590 (885)
2 1mhs_A Proton pump, plasma mem 100.0 2.5E-76 8.7E-81 658.9 32.2 413 38-478 88-636 (920)
3 2zxe_A Na, K-ATPase alpha subu 100.0 1.7E-74 5.8E-79 657.3 40.5 453 19-478 44-724 (1028)
4 3ixz_A Potassium-transporting 100.0 1.3E-73 4.5E-78 650.8 44.1 453 19-478 49-729 (1034)
5 3ar4_A Sarcoplasmic/endoplasmi 100.0 2.6E-72 9E-77 638.9 38.4 450 22-478 4-706 (995)
6 3rfu_A Copper efflux ATPase; a 100.0 9.9E-54 3.4E-58 468.8 26.0 337 95-478 184-626 (736)
7 3j08_A COPA, copper-exporting 100.0 6.3E-52 2.2E-56 450.7 19.4 330 98-478 95-528 (645)
8 3j09_A COPA, copper-exporting 100.0 7.1E-52 2.4E-56 456.0 19.7 330 98-478 173-606 (723)
9 2hc8_A PACS, cation-transporti 99.9 7E-24 2.4E-28 178.7 8.6 80 132-218 16-95 (113)
10 2kij_A Copper-transporting ATP 99.9 3.2E-23 1.1E-27 177.7 6.0 95 117-218 2-107 (124)
11 3gwi_A Magnesium-transporting 99.8 3.7E-19 1.3E-23 161.1 14.1 129 261-390 16-165 (170)
12 2yj3_A Copper-transporting ATP 99.6 1.4E-20 4.8E-25 182.8 0.0 191 226-478 11-208 (263)
13 3a1c_A Probable copper-exporti 99.7 9E-17 3.1E-21 157.7 10.9 208 226-478 15-234 (287)
14 3skx_A Copper-exporting P-type 99.3 3.4E-12 1.2E-16 123.1 10.6 199 231-478 1-215 (280)
15 1svj_A Potassium-transporting 99.2 1.7E-11 5.8E-16 108.7 7.5 121 250-393 13-156 (156)
16 4fe3_A Cytosolic 5'-nucleotida 98.6 7.2E-09 2.5E-13 101.6 0.6 84 388-478 139-240 (297)
17 2kmv_A Copper-transporting ATP 98.4 8.2E-07 2.8E-11 80.8 9.1 120 252-390 1-185 (185)
18 2arf_A Wilson disease ATPase; 97.7 6.4E-05 2.2E-09 66.9 8.0 110 261-389 23-165 (165)
19 2jmz_A Hypothetical protein MJ 62.7 6.3 0.00021 34.9 4.0 32 132-163 107-138 (186)
20 2lcj_A PAB POLC intein; hydrol 50.4 12 0.00042 33.0 3.8 30 132-161 97-126 (185)
21 3n28_A Phosphoserine phosphata 36.1 13 0.00044 35.8 1.7 25 454-478 247-271 (335)
22 2wwb_A Protein transport prote 33.0 2.3E+02 0.0078 28.8 10.5 79 38-123 385-466 (476)
23 3ij5_A 3-deoxy-D-manno-octulos 29.8 18 0.00061 32.5 1.4 60 409-478 87-150 (211)
24 3n1u_A Hydrolase, HAD superfam 27.4 12 0.0004 33.0 -0.3 63 408-478 56-120 (191)
25 3mn1_A Probable YRBI family ph 26.3 23 0.00077 30.9 1.4 63 406-478 54-120 (189)
26 1at0_A 17-hedgehog; developmen 24.9 45 0.0015 28.0 3.0 22 136-157 82-103 (145)
27 3n07_A 3-deoxy-D-manno-octulos 24.4 11 0.00038 33.5 -1.1 94 351-477 23-125 (195)
28 3ewi_A N-acylneuraminate cytid 23.5 31 0.001 29.7 1.7 24 237-260 3-26 (168)
29 2k1g_A Lipoprotein SPR; soluti 23.2 72 0.0025 26.5 3.9 21 139-159 61-81 (135)
30 1rku_A Homoserine kinase; phos 21.9 56 0.0019 28.0 3.2 27 452-478 129-155 (206)
31 3sgi_A DNA ligase; HET: DNA AM 21.6 30 0.001 36.5 1.5 22 141-162 374-396 (615)
No 1
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-81 Score=700.58 Aligned_cols=450 Identities=70% Similarity=1.078 Sum_probs=393.3
Q ss_pred cccccccCCHHHHHHHcCC----CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCC
Q 036987 19 HQQVLLDIPIEEVFENLKC----LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGK 94 (478)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~----Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (478)
.+.++|.++++++++.|++ ||++|+++|+++||+|+++.++++.|+.|+++|++|++++|+++++++++++...+.
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~ 89 (885)
T 3b8c_A 10 ETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGR 89 (885)
T ss_dssp --CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTS
T ss_pred cchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4568999999999999987 999999999999999999988888899999999999999999999999988755555
Q ss_pred CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEE
Q 036987 95 DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLV 167 (478)
Q Consensus 95 ~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl 167 (478)
+..|++++++++ +++.++++++++++++++++|.++. |+|||++++|++++|+|||+|.|++||+|||||+|+
T Consensus 90 ~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll 169 (885)
T 3b8c_A 90 PPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLL 169 (885)
T ss_dssp CSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCC
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEE
Confidence 557888776655 6777889999999999999988765 999999999999999999999999999999999999
Q ss_pred ecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccc-------------cc-----
Q 036987 168 EGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHL-------------HL----- 225 (478)
Q Consensus 168 ~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~-------------~~----- 225 (478)
+|+.+.||| |+|||||.|+.|.+|+.+|+||.|.+|.+.++|++| ..|++ ++
T Consensus 170 ~g~~l~VdE------S~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 170 EGDPLKVDQ------SALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243 (885)
T ss_dssp CSSCBCCCC------CSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHH
T ss_pred EcCcccccc------cccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHH
Confidence 996679999 999999999999999999999999999999999998 22221 11
Q ss_pred --------------------------------------------------------------cccceecchhHHhhhcce
Q 036987 226 --------------------------------------------------------------IQSAITKRMTAIEEMAGM 243 (478)
Q Consensus 226 --------------------------------------------------------------~~~ilvk~~~~~e~lg~v 243 (478)
++|++||+++++|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v 323 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 323 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCC
Confidence 999999999999999999
Q ss_pred eEEEecCccccccCchh---------------HHHHHHHHHhcccccCChhhHHHHHHcCCcc-----eeeeEeecCCCC
Q 036987 244 DVLCSDKTGTLTLNKLT---------------DMVVLMAARASTLENQVAIDGAIVSMLAGPK-----KARVHFLLFNPT 303 (478)
Q Consensus 244 ~~i~~DKTGTLT~~~~~---------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~-----~~~~~~~~F~s~ 303 (478)
++||||||||||+|+|+ ++++.+++.++...++||++.|+++++.++. ...++.+||+|.
T Consensus 324 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~ 403 (885)
T 3b8c_A 324 DVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPV 403 (885)
T ss_dssp CCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTT
T ss_pred CEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcc
Confidence 99999999999999998 2456777777765456999999999876432 134778999999
Q ss_pred CceEEEEEEeCCCeEEEEEeCcHHHHHHhcc--HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEE
Q 036987 304 DKRAAITYVDGAGIMHRVSKGAPEQILHLAH--KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEF 381 (478)
Q Consensus 304 ~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~--~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~ 381 (478)
+|+|+++++..+|+.+.++|||||.++++|+ ...++.+.+.+++|+++|+|++++|+++++.. .++..|++|+|
T Consensus 404 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~----~~~~~e~~l~~ 479 (885)
T 3b8c_A 404 DKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEK----TKESPGAPWEF 479 (885)
T ss_dssp TCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSS----SSSCCCCCCCC
T ss_pred cceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccc----cccccccCcEE
Confidence 9999988876677778899999999999996 34466788889999999999999999987642 23456889999
Q ss_pred EEEeecCCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCC
Q 036987 382 VGLLPLFDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKAD 447 (478)
Q Consensus 382 lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 447 (478)
+|+++++||||||++++|+ |++.||.+||+++||.........++|.+.+..++..++++.+.+.+
T Consensus 480 lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~ 559 (885)
T 3b8c_A 480 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKAD 559 (885)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSC
T ss_pred EEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCc
Confidence 9999999999999999999 99999999999999976555556677766665578888999999999
Q ss_pred EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 448 GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 448 v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
||||++|+||.++|+.||++|++|+|||||+
T Consensus 560 v~arv~P~~K~~iV~~lq~~g~~Vam~GDGv 590 (885)
T 3b8c_A 560 GFAGVFPEHKYEIVKKLQERKHIVGMTGDGV 590 (885)
T ss_dssp CEECCCHHHHHHHHHHHHHTTCCCCBCCCSS
T ss_pred EEEEECHHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 9999999999999999999999999999996
No 2
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=2.5e-76 Score=658.95 Aligned_cols=413 Identities=39% Similarity=0.646 Sum_probs=358.7
Q ss_pred CCHHHHHHHHHhcCCCccCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHH--HHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKKESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVI--IINSTTSFK 115 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~ 115 (478)
||++|+++|+++||+|+++.++++.|..|+++|.+|++++++++++++++++ .|.+++++++ +++.+++++
T Consensus 88 Ls~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~vv~i~~~i~~~ 160 (920)
T 1mhs_A 88 LTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICGLLLLNAVVGFV 160 (920)
T ss_dssp CCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888899999999999999999999999998865 6776665544 788899999
Q ss_pred HHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCc-EEEeccccccccccccCC
Q 036987 116 EENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDP-LKIDRFQFCLWSALTGES 189 (478)
Q Consensus 116 ~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~-~~vde~~~~~~S~LTGEs 189 (478)
|+++++++.++|+++. |+|||++++|++++|||||+|.|++||+|||||+|++|+. +.||| |+|||||
T Consensus 161 qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDE------S~LTGES 234 (920)
T 1mhs_A 161 QEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQ------SALTGES 234 (920)
T ss_dssp HHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBC------TTTSSCC
T ss_pred HHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeec------cccCCCC
Confidence 9999999999998765 9999999999999999999999999999999999999964 89999 9999999
Q ss_pred ceeecCCCCeeeeccEEeeeeEEEEEEEe----ecccccc----------------------------------------
Q 036987 190 LPVTKNPGDGVYSGSTCKQGEIAAVVIAN----CNGHLHL---------------------------------------- 225 (478)
Q Consensus 190 ~pv~K~~~~~v~aGt~v~~g~~~~~V~~t----~~g~~~~---------------------------------------- 225 (478)
.|+.|.+|+.+|+||.|.+|.+.++|++| ..|++.+
T Consensus 235 ~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~ 314 (920)
T 1mhs_A 235 LAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY 314 (920)
T ss_dssp CCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred cceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 2232211
Q ss_pred ----------------------------------------cccceecchhHHhhhcceeEEEecCccccccCchh-----
Q 036987 226 ----------------------------------------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT----- 260 (478)
Q Consensus 226 ----------------------------------------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~----- 260 (478)
++|++||+++++|+||++++||||||||||+|+|+
T Consensus 315 ~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~ 394 (920)
T 1mhs_A 315 RSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPY 394 (920)
T ss_dssp TTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCB
T ss_pred cCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEe
Confidence 89999999999999999999999999999999999
Q ss_pred -------HHHHHHHHHhcccccC--ChhhHHHHHHcCCc--------ceeeeEeecCCCCCceEEEEEEeCCCeEEEEEe
Q 036987 261 -------DMVVLMAARASTLENQ--VAIDGAIVSMLAGP--------KKARVHFLLFNPTDKRAAITYVDGAGIMHRVSK 323 (478)
Q Consensus 261 -------~~~l~~~~~~~~~~~~--~p~~~ai~~~~~~~--------~~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~K 323 (478)
++++..++.+...... ||++.|+++++... ....++.+||+|.+|+|++++...+|+.+.|+|
T Consensus 395 ~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~K 474 (920)
T 1mhs_A 395 TVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVK 474 (920)
T ss_dssp CCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEE
T ss_pred ecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEe
Confidence 2455555555443333 99999999865211 123478899999999999998766777789999
Q ss_pred CcHHHHHHhcc------HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHH
Q 036987 324 GAPEQILHLAH------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAE 397 (478)
Q Consensus 324 Ga~e~i~~~c~------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~ 397 (478)
||||.|+++|+ ...++.+.+.+++|+++|+|++++|++.. |++|+|+|+++++||||||+++
T Consensus 475 Gape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~------------e~~l~~lGli~i~Dp~R~ea~~ 542 (920)
T 1mhs_A 475 GAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------------EGSWEILGIMPCMDPPRHDTYK 542 (920)
T ss_dssp ECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS------------SCSCCCCBBCCCCCCCCHHHHH
T ss_pred CCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc------------ccccEEEEEEEEeccccccHHH
Confidence 99999999996 24567788889999999999999999851 5688999999999999999999
Q ss_pred HHH--------------HhHHHHHHHHHHcCCCCCCcccc--ccccccccccCCcchHHHHhhcCCEEEecChHHHHHHH
Q 036987 398 TIS--------------DQIAIAKETGRKLGMGTNMYLSS--SLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIV 461 (478)
Q Consensus 398 ~I~--------------D~~~tA~~ia~~~Gi~~~~~~~~--~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV 461 (478)
+|+ |++.||.+||+++||.......+ .++|. ..++.+++.+.+.+.+||||++|+||.++|
T Consensus 543 aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~K~~iV 619 (920)
T 1mhs_A 543 TVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQHKYNVV 619 (920)
T ss_dssp HHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTHHHHHH
T ss_pred HHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHHHHHHH
Confidence 999 99999999999999965332222 23443 356777888888899999999999999999
Q ss_pred HHHHhCCCEEEEeCCCC
Q 036987 462 RRLHDRKHISGMTGDGT 478 (478)
Q Consensus 462 ~~lq~~g~~V~m~GDGv 478 (478)
+.||++|++|+|||||+
T Consensus 620 ~~Lq~~g~~Vam~GDGv 636 (920)
T 1mhs_A 620 EILQQRGYLVAMTGDGV 636 (920)
T ss_dssp HHHHTTTCCCEECCCCG
T ss_pred HHHHhCCCeEEEEcCCc
Confidence 99999999999999995
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=1.7e-74 Score=657.31 Aligned_cols=453 Identities=23% Similarity=0.313 Sum_probs=374.4
Q ss_pred cccccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC-
Q 036987 19 HQQVLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAHG- 91 (478)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~- 91 (478)
.+++||.++++++++.|++ ||++|+++|+++||+|.++.++ ++.|..|++||++|++++|+++++++++++..
T Consensus 44 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~ 123 (1028)
T 2zxe_A 44 VSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQ 123 (1028)
T ss_dssp CCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 4568999999999999986 9999999999999999999874 78899999999999999999999999887431
Q ss_pred ---CC--CCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCe
Q 036987 92 ---GG--KDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEI 159 (478)
Q Consensus 92 ---~~--~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~ 159 (478)
.. ....|++++++++ +++++++++|++++++++++++++. |+|||++++|++++|||||+|.|++||+
T Consensus 124 ~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~ 203 (1028)
T 2zxe_A 124 AATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDR 203 (1028)
T ss_dssp HHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCB
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCE
Confidence 11 1124555554444 8888999999999999999888765 9999999999999999999999999999
Q ss_pred eeccEEEEecCcEEEeccccccccccccCCceeecCCCC----------eeeeccEEeeeeEEEEEEEe----ecccccc
Q 036987 160 VSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGD----------GVYSGSTCKQGEIAAVVIAN----CNGHLHL 225 (478)
Q Consensus 160 IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~----------~v~aGt~v~~g~~~~~V~~t----~~g~~~~ 225 (478)
|||||+|++|+.+.||| |+|||||.|+.|.+++ .+|+||.|.+|.+.++|++| ..|++.+
T Consensus 204 IPaD~~ll~g~~~~Vde------S~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~ 277 (1028)
T 2zxe_A 204 IPADLRIISAHGCKVDN------SSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIAT 277 (1028)
T ss_dssp CCSEEEEEEEEEEEEEC------HHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHH
T ss_pred eeceEEEEeeCcEEEEc------CccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHH
Confidence 99999999996689999 9999999999999875 59999999999999999999 1121110
Q ss_pred --------------------------------------------------------------------------------
Q 036987 226 -------------------------------------------------------------------------------- 225 (478)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (478)
T Consensus 278 ~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ma 357 (1028)
T 2zxe_A 278 LASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 357 (1028)
T ss_dssp HHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHh
Confidence
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh------H-------------------------HHHHHHHHhccc-
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT------D-------------------------MVVLMAARASTL- 273 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~------~-------------------------~~l~~~~~~~~~- 273 (478)
++|++||+++++|+||++++||||||||||+|+|+ . .++.+++.|+..
T Consensus 358 k~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~ 437 (1028)
T 2zxe_A 358 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAV 437 (1028)
T ss_dssp TTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCE
T ss_pred hCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999997 0 244455554311
Q ss_pred --------------ccCChhhHHHHHHcCCc---------ceeeeEeecCCCCCceEEEEEEeC---CCeEEEEEeCcHH
Q 036987 274 --------------ENQVAIDGAIVSMLAGP---------KKARVHFLLFNPTDKRAAITYVDG---AGIMHRVSKGAPE 327 (478)
Q Consensus 274 --------------~~~~p~~~ai~~~~~~~---------~~~~~~~~~F~s~~k~~sv~~~~~---~g~~~~~~KGa~e 327 (478)
..++|+|.|++.++... ...+++.+||+|.+|||+++++.. +|+++.|+|||||
T Consensus 438 ~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e 517 (1028)
T 2zxe_A 438 FQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPE 517 (1028)
T ss_dssp ECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHH
T ss_pred eecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcH
Confidence 12378888998876432 123478899999999999998853 5778899999999
Q ss_pred HHHHhcc------------HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCC-------CCCCCCCCcEEEEEeecC
Q 036987 328 QILHLAH------------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRG-------TKDNPGGPWEFVGLLPLF 388 (478)
Q Consensus 328 ~i~~~c~------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~-------~~~~~e~~l~~lG~i~~~ 388 (478)
.|+++|+ ...++.+.+.+++|+++|+||+++||+.++..+... ..+..|.+|+|+|+++++
T Consensus 518 ~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~ 597 (1028)
T 2zxe_A 518 RILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMI 597 (1028)
T ss_dssp HHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEE
T ss_pred HHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccC
Confidence 9999996 345677888999999999999999999886532211 123347899999999999
Q ss_pred CCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCcc----------------------ccccccccccc
Q 036987 389 DPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMYL----------------------SSSLLRESKDE 432 (478)
Q Consensus 389 D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~~----------------------~~~~~g~~~~~ 432 (478)
||+||+++++|+ |+..||.++|+++||...-.. ...++|....
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~- 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK- 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT-
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh-
Confidence 999999999999 999999999999999632100 0122333222
Q ss_pred cCCcchHHHHhhcCC--EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 433 TNSALPIDELIEKAD--GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 433 ~~~~~~~~~~l~~~~--v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.+..+.+.+++.... ||||++|+||..+|+.+|+.|++|+|+|||+
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ 724 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 724 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSG
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCc
Confidence 456677888887775 9999999999999999999999999999995
No 4
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=1.3e-73 Score=650.85 Aligned_cols=453 Identities=22% Similarity=0.294 Sum_probs=372.6
Q ss_pred cccccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhc--
Q 036987 19 HQQVLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAH-- 90 (478)
Q Consensus 19 ~~~~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-- 90 (478)
.+++||.++++++++.|++ ||++||++|+++||+|+++.++ .+.|+.|++||++|++++++++++++++++.
T Consensus 49 ~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~ 128 (1034)
T 3ixz_A 49 MEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQ 128 (1034)
T ss_pred cCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHh
Confidence 3568999999999999987 9999999999999999999876 5788999999999999999999999887642
Q ss_pred -CCCC---CCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCe
Q 036987 91 -GGGK---DPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEI 159 (478)
Q Consensus 91 -~~~~---~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~ 159 (478)
..+. ...|++++++++ +++++++++|++++++++++++++. |+|||++++|++++|||||||.|++||+
T Consensus 129 ~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~ 208 (1034)
T 3ixz_A 129 ASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDR 208 (1034)
T ss_pred hccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCce
Confidence 1111 124555555554 8899999999999999999999875 9999999999999999999999999999
Q ss_pred eeccEEEEecCcEEEeccccccccccccCCceeecCCC----------CeeeeccEEeeeeEEEEEEEe----ecccccc
Q 036987 160 VSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPG----------DGVYSGSTCKQGEIAAVVIAN----CNGHLHL 225 (478)
Q Consensus 160 IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~----------~~v~aGt~v~~g~~~~~V~~t----~~g~~~~ 225 (478)
|||||+|++|+++.||| |+|||||.|+.|.++ +.+|+||.+.+|++.++|++| ..|++.+
T Consensus 209 VPAD~~ll~~~~l~VdE------S~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~ 282 (1034)
T 3ixz_A 209 VPADIRILQAQGRKVDN------SSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIAS 282 (1034)
T ss_pred ecCCeEEEEeCCceEEe------cccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHH
Confidence 99999999997799999 999999999999775 568999999999999999999 2232211
Q ss_pred --------------------------------------------------------------------------------
Q 036987 226 -------------------------------------------------------------------------------- 225 (478)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (478)
T Consensus 283 ~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rma 362 (1034)
T 3ixz_A 283 LASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLA 362 (1034)
T ss_pred hhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHh
Confidence
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh-------------------------------HHHHHHHHHhccc-
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------------------------------DMVVLMAARASTL- 273 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------------------------------~~~l~~~~~~~~~- 273 (478)
++|++||+++++|+||++++||||||||||+|+|+ ..++..++.|+..
T Consensus 363 k~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~ 442 (1034)
T 3ixz_A 363 SKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAA 442 (1034)
T ss_pred hCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccce
Confidence 99999999999999999999999999999999998 0233444444321
Q ss_pred --------------ccCChhhHHHHHHcCCc---------ceeeeEeecCCCCCceEEEEEEeC---CCeEEEEEeCcHH
Q 036987 274 --------------ENQVAIDGAIVSMLAGP---------KKARVHFLLFNPTDKRAAITYVDG---AGIMHRVSKGAPE 327 (478)
Q Consensus 274 --------------~~~~p~~~ai~~~~~~~---------~~~~~~~~~F~s~~k~~sv~~~~~---~g~~~~~~KGa~e 327 (478)
..++|.+.|++.++... ...+++.+||+|++|+|++++... ++.++.|+|||||
T Consensus 443 ~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe 522 (1034)
T 3ixz_A 443 FKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPE 522 (1034)
T ss_pred eccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChH
Confidence 11378999998876321 123488999999999998877642 3678999999999
Q ss_pred HHHHhcc------------HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCC-------CCCCCCCCcEEEEEeecC
Q 036987 328 QILHLAH------------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRG-------TKDNPGGPWEFVGLLPLF 388 (478)
Q Consensus 328 ~i~~~c~------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~-------~~~~~e~~l~~lG~i~~~ 388 (478)
.|+++|+ +..++.+.+..++|+.+|+||+++|++.++..+... ..+..|++|+|+|+++++
T Consensus 523 ~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~ 602 (1034)
T 3ixz_A 523 RVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMI 602 (1034)
T ss_pred HHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEecc
Confidence 9999996 245677888999999999999999999987543211 123458899999999999
Q ss_pred CCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCc----------------------cccccccccccc
Q 036987 389 DPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMY----------------------LSSSLLRESKDE 432 (478)
Q Consensus 389 D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~----------------------~~~~~~g~~~~~ 432 (478)
||+|++++++|+ |+..||.++|+++||..... ....++|... .
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQL-K 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhh-h
Confidence 999999999999 99999999999999954210 0012233222 2
Q ss_pred cCCcchHHHHhhcCC--EEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 433 TNSALPIDELIEKAD--GFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 433 ~~~~~~~~~~l~~~~--v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.++.+++.+.+.... +|||++|+||.++|+.+|+.|++|+|+|||+
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ 729 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGV 729 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcH
Confidence 456667777776654 9999999999999999999999999999995
No 5
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=2.6e-72 Score=638.91 Aligned_cols=450 Identities=26% Similarity=0.362 Sum_probs=371.1
Q ss_pred ccccCCHHHHHHHcCC-----CCHHHHHHHHHhcCCCccCCCC-chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCC--
Q 036987 22 VLLDIPIEEVFENLKC-----LTSDDVKERLNLFGYNRLEGKK-ESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGG-- 93 (478)
Q Consensus 22 ~~~~~~~~~~~~~l~~-----Ls~~~v~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 93 (478)
+||.++++++++.|++ ||++|+++|+++||+|.++.++ +++|+.|++||++|++++|+++++++++++....
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 5899999999999986 9999999999999999999875 6888999999999999999999999999875321
Q ss_pred -CCCchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCe-----EeeCCe--EEEEeCCCCCcCcEEEEcCCCeeecc
Q 036987 94 -KDPDYHDFIGIVI--IINSTTSFKEENNAGNAAAALMAQS-----YLRDGR--WNEEDAAEMVPGDIISIKLGEIVSAD 163 (478)
Q Consensus 94 -~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~-----v~r~g~--~~~i~~~~lv~GDiv~v~~G~~IPaD 163 (478)
....|++++++++ +++.++++++++++++++++|+++. |+|||. .++|++++|+|||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1236777766655 6777899999999999999888765 999887 69999999999999999999999999
Q ss_pred EEEEe--cCcEEEeccccccccccccCCceeecCCC-------------CeeeeccEEeeeeEEEEEEEe----------
Q 036987 164 ARLVE--GDPLKIDRFQFCLWSALTGESLPVTKNPG-------------DGVYSGSTCKQGEIAAVVIAN---------- 218 (478)
Q Consensus 164 ~~vl~--g~~~~vde~~~~~~S~LTGEs~pv~K~~~-------------~~v~aGt~v~~g~~~~~V~~t---------- 218 (478)
|+|++ +.++.||| |+|||||.|+.|.++ +.+|+||.|.+|.+.++|++|
T Consensus 164 ~~ll~~~s~~l~Vde------S~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 237 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQ------SILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 237 (995)
T ss_dssp EEEEEECSSCEEEEC------HHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHH
T ss_pred EEEEEEeeceEEEEc------ccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHH
Confidence 99965 34789999 999999999999987 689999999999999999999
Q ss_pred --------------------------------------ecccc----------c-------c------------------
Q 036987 219 --------------------------------------CNGHL----------H-------L------------------ 225 (478)
Q Consensus 219 --------------------------------------~~g~~----------~-------~------------------ 225 (478)
....+ . .
T Consensus 238 ~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt 317 (995)
T 3ar4_A 238 DQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVIT 317 (995)
T ss_dssp HHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHH
T ss_pred HHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 00000 0 0
Q ss_pred -----------cccceecchhHHhhhcceeEEEecCccccccCchh-------H---H----------------------
Q 036987 226 -----------IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------D---M---------------------- 262 (478)
Q Consensus 226 -----------~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------~---~---------------------- 262 (478)
++|++||+++++|+||++++||||||||||+|+|+ . .
T Consensus 318 ~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 397 (995)
T 3ar4_A 318 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVL 397 (995)
T ss_dssp HHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEE
T ss_pred HHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccc
Confidence 88999999999999999999999999999999998 1 0
Q ss_pred ----------------HHHHHHHhccc------------ccCChhhHHHHHHcCC-----c-------------------
Q 036987 263 ----------------VVLMAARASTL------------ENQVAIDGAIVSMLAG-----P------------------- 290 (478)
Q Consensus 263 ----------------~l~~~~~~~~~------------~~~~p~~~ai~~~~~~-----~------------------- 290 (478)
++.+++.|+.. ..++|.|.|++.++.. .
T Consensus 398 ~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~ 477 (995)
T 3ar4_A 398 KNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIR 477 (995)
T ss_dssp ETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhh
Confidence 11223333211 0148999999865421 0
Q ss_pred -ceeeeEeecCCCCCceEEEEEEeCCC-----eEEEEEeCcHHHHHHhcc------------HHHHHHHHHHHHHH--hh
Q 036987 291 -KKARVHFLLFNPTDKRAAITYVDGAG-----IMHRVSKGAPEQILHLAH------------KEIEKKVHGIIDKF--AE 350 (478)
Q Consensus 291 -~~~~~~~~~F~s~~k~~sv~~~~~~g-----~~~~~~KGa~e~i~~~c~------------~~~~~~~~~~~~~~--~~ 350 (478)
...+++.+||+|++|||+++++..+| ++..|+|||||.|+++|+ +..++.+.+.+++| ++
T Consensus 478 ~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 557 (995)
T 3ar4_A 478 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557 (995)
T ss_dssp HHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHST
T ss_pred hhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhh
Confidence 11347899999999999999986555 578999999999999996 24466788889999 99
Q ss_pred ccceeeEEEeeeccccccCC------CCCCCCCCcEEEEEeecCCCCCcCcHHHHH--------------HhHHHHHHHH
Q 036987 351 CGLRSLAVAWQVINLCRKRG------TKDNPGGPWEFVGLLPLFDPPHHDSAETIS--------------DQIAIAKETG 410 (478)
Q Consensus 351 ~G~r~l~~A~~~~~~~~~~~------~~~~~e~~l~~lG~i~~~D~lR~~~~~~I~--------------D~~~tA~~ia 410 (478)
+|+||+++||++++..+... .++..|++|+|+|+++++||+||+++++|+ |+..||.++|
T Consensus 558 ~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia 637 (995)
T 3ar4_A 558 DTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC 637 (995)
T ss_dssp TCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred ccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH
Confidence 99999999999875432111 122347899999999999999999999999 9999999999
Q ss_pred HHcCCCCCC--ccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 411 RKLGMGTNM--YLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 411 ~~~Gi~~~~--~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
+++||...- ..+..++|+..+ .++.+++.+.+.+..||||++|+||.++|+.||++|+.|+|+|||+
T Consensus 638 ~~lgi~~~~~~i~~~~~~g~~~~-~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ 706 (995)
T 3ar4_A 638 RRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706 (995)
T ss_dssp HHHTSSCTTCCCTTTEEEHHHHH-TSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSG
T ss_pred HHcCcCCCCCcccceEEEchhhh-hCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 999996421 112344454433 5667778888888999999999999999999999999999999995
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=9.9e-54 Score=468.82 Aligned_cols=337 Identities=22% Similarity=0.282 Sum_probs=274.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhcCe-----Eee-CCeEEEEeCCCCCcCcEEEEcCCCeeeccEE
Q 036987 95 DPDYHDFIGIVIIINSTTSFKEENNAG---NAAAALMAQS-----YLR-DGRWNEEDAAEMVPGDIISIKLGEIVSADAR 165 (478)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~l~~~~-----v~r-~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~ 165 (478)
...|++.+.+++++..+..+++.+..+ +++++|.++. ++| ||++++|++++|+|||+|.|++||+|||||+
T Consensus 184 ~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~ 263 (736)
T 3rfu_A 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGE 263 (736)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEE
Confidence 356888887776666677777776554 4566666654 666 9999999999999999999999999999999
Q ss_pred EEecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEee----ccc--------------ccc--
Q 036987 166 LVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANC----NGH--------------LHL-- 225 (478)
Q Consensus 166 vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t~----~g~--------------~~~-- 225 (478)
|++| .+.||| |+|||||.|+.|.+|+.+|+||.+.+|.+.++|++|. .|+ +++
T Consensus 264 vl~G-~~~VDE------S~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~ 336 (736)
T 3rfu_A 264 VQEG-RSFVDE------SMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLA 336 (736)
T ss_dssp ECSS-CEEEEC------SSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHH
T ss_pred EEEC-ceEeee------cccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHH
Confidence 9999 789999 9999999999999999999999999999999999981 111 111
Q ss_pred ------------------------------------------------------------------cccceecchhHHhh
Q 036987 226 ------------------------------------------------------------------IQSAITKRMTAIEE 239 (478)
Q Consensus 226 ------------------------------------------------------------------~~~ilvk~~~~~e~ 239 (478)
++|++||+++++|+
T Consensus 337 d~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~ 416 (736)
T 3rfu_A 337 DTVSGWFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALER 416 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHH
Confidence 99999999999999
Q ss_pred hcceeEEEecCccccccCchh-----------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEE
Q 036987 240 MAGMDVLCSDKTGTLTLNKLT-----------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAA 308 (478)
Q Consensus 240 lg~v~~i~~DKTGTLT~~~~~-----------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~s 308 (478)
||++++||||||||||+|+|+ ++++.+++..+..++ ||+++|+++++...........+|++..++..
T Consensus 417 l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~~~~~~~~~~~f~~~~g~gv 495 (736)
T 3rfu_A 417 MEKVNTLVVDKTGTLTEGHPKLTRIVTDDFVEDNALALAAALEHQSE-HPLANAIVHAAKEKGLSLGSVEAFEAPTGKGV 495 (736)
T ss_dssp HTSCCEEEECCBTTTBCSSCEEEEEEESSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTTCCCCCCCSCCCCCTTTEE
T ss_pred hcCCCEEEEeCCCCCcCCceEEEEEEecCCCHHHHHHHHHHHhhcCC-ChHHHHHHHHHHhcCCCccCcccccccCCceE
Confidence 999999999999999999998 567888888877776 99999999988654333334567888877653
Q ss_pred EEEEeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecC
Q 036987 309 ITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLF 388 (478)
Q Consensus 309 v~~~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~ 388 (478)
.. ..+|+ .+.+|+++.+.+.+. ....+.+..++++.+|+|++++|++. +++|+++++
T Consensus 496 ~~--~~~g~--~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~G~~vl~va~d~-----------------~~~G~i~i~ 552 (736)
T 3rfu_A 496 VG--QVDGH--HVAIGNARLMQEHGG--DNAPLFEKADELRGKGASVMFMAVDG-----------------KTVALLVVE 552 (736)
T ss_dssp EE--CSSSS--CEEEESHHHHHHHCC--CCHHHHHHHHHHHHTTCEEEEEEETT-----------------EEEEEEEEE
T ss_pred EE--EECCE--EEEEcCHHHHHHcCC--ChhHHHHHHHHHHhcCCeEEEEEECC-----------------EEEEEEEee
Confidence 22 23553 466799998876553 22345667888999999999999976 999999999
Q ss_pred CCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCC
Q 036987 389 DPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRK 468 (478)
Q Consensus 389 D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g 468 (478)
|++|++++++|+.. ++.|+...++||+... ....+.+.++...+|++++|+||.++|+.||++|
T Consensus 553 D~i~~~~~~aI~~L--------~~~Gi~v~mlTGd~~~--------~a~~ia~~lgi~~v~a~~~P~~K~~~v~~l~~~g 616 (736)
T 3rfu_A 553 DPIKSSTPETILEL--------QQSGIEIVMLTGDSKR--------TAEAVAGTLGIKKVVAEIMPEDKSRIVSELKDKG 616 (736)
T ss_dssp CCBCSSHHHHHHHH--------HHHTCEEEEECSSCHH--------HHHHHHHHHTCCCEECSCCHHHHHHHHHHHHHHS
T ss_pred ccchhhHHHHHHHH--------HHCCCeEEEECCCCHH--------HHHHHHHHcCCCEEEEecCHHHHHHHHHHHHhcC
Confidence 99999999999854 6667766665554321 3445566666667899999999999999999999
Q ss_pred CEEEEeCCCC
Q 036987 469 HISGMTGDGT 478 (478)
Q Consensus 469 ~~V~m~GDGv 478 (478)
+.|+|+|||+
T Consensus 617 ~~V~~vGDG~ 626 (736)
T 3rfu_A 617 LIVAMAGDGV 626 (736)
T ss_dssp CCEEEEECSS
T ss_pred CEEEEEECCh
Confidence 9999999995
No 7
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=6.3e-52 Score=450.72 Aligned_cols=330 Identities=20% Similarity=0.262 Sum_probs=262.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEec
Q 036987 98 YHDFIGIVIIINSTTSFKEENNAGN---AAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEG 169 (478)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g 169 (478)
|++..++++++..+..+++.+..+| +++++.++. |+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 6676666666667788888776654 344444433 99999999999999999999999999999999999999
Q ss_pred CcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEee----cccc--------------cc------
Q 036987 170 DPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANC----NGHL--------------HL------ 225 (478)
Q Consensus 170 ~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t~----~g~~--------------~~------ 225 (478)
++.||| |+|||||.|+.|.+|+.+|+||.+.+|.+.++|++|. .|++ ++
T Consensus 175 -~~~Vde------S~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~ 247 (645)
T 3j08_A 175 -ESYVDE------SMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVV 247 (645)
T ss_dssp -CEEEEC------HHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHH
T ss_pred -cEEEEc------ccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 789999 9999999999999999999999999999999999981 1110 00
Q ss_pred -------------------------------------------------------------cccceecchhHHhhhccee
Q 036987 226 -------------------------------------------------------------IQSAITKRMTAIEEMAGMD 244 (478)
Q Consensus 226 -------------------------------------------------------------~~~ilvk~~~~~e~lg~v~ 244 (478)
++|++||+++++|+||+++
T Consensus 248 ~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~ 327 (645)
T 3j08_A 248 AYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVT 327 (645)
T ss_dssp HHHHHHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCC
Confidence 9999999999999999999
Q ss_pred EEEecCccccccCchh-----------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEEEEEe
Q 036987 245 VLCSDKTGTLTLNKLT-----------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVD 313 (478)
Q Consensus 245 ~i~~DKTGTLT~~~~~-----------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv~~~~ 313 (478)
++|||||||||+|+|+ ++++.+++.++..++ ||++.|+++++.+.........+|.+..++....
T Consensus 328 ~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g~~~~~~~~~~~~~g~g~~~--- 403 (645)
T 3j08_A 328 AVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVA--- 403 (645)
T ss_dssp EEEEEGGGTSSSSCCEEEEEEESSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEE---
T ss_pred EEEEcCcccccCCCeEEEEEEeCCCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcCCCcCCccceEEecCCceEE---
Confidence 9999999999999998 568888888887776 9999999998743321111112222222211100
Q ss_pred CCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCc
Q 036987 314 GAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHH 393 (478)
Q Consensus 314 ~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~ 393 (478)
..+.+|+++.+.+... ..++.+....+++..+|+|++++|++. +++|+++++|++||
T Consensus 404 -----~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~l~va~~~-----------------~~~G~i~~~D~l~~ 460 (645)
T 3j08_A 404 -----DGILVGNKRLMEDFGV-AVSNEVELALEKLEREAKTAVIVARNG-----------------RVEGIIAVSDTLKE 460 (645)
T ss_dssp -----TTEEEECHHHHHHTTC-CCCHHHHHHHHHHHTTTCCCEEEEETT-----------------EEEEEEEEECCCTT
T ss_pred -----EEEEECCHHHHHhcCC-CccHHHHHHHHHHHhcCCeEEEEEECC-----------------EEEEEEEecCCchh
Confidence 2467899988765442 334567778889999999999999976 99999999999999
Q ss_pred CcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEE
Q 036987 394 DSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGM 473 (478)
Q Consensus 394 ~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m 473 (478)
+++++|+.. ++.|+...+.||+... ....+.+.++...+|++++|+||.++|+.||++ +.|+|
T Consensus 461 ~~~~~i~~L--------~~~Gi~v~~~TGd~~~--------~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~ 523 (645)
T 3j08_A 461 SAKPAVQEL--------KRMGIKVGMITGDNWR--------SAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAF 523 (645)
T ss_dssp THHHHHHHH--------HHTTCEEEEECSSCHH--------HHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEE
T ss_pred HHHHHHHHH--------HHCCCEEEEEeCCCHH--------HHHHHHHHcCCCEEEEeCCHHhHHHHHHHHhhC-CeEEE
Confidence 999999854 6677766655554321 344555666666789999999999999999988 89999
Q ss_pred eCCCC
Q 036987 474 TGDGT 478 (478)
Q Consensus 474 ~GDGv 478 (478)
+|||+
T Consensus 524 vGDg~ 528 (645)
T 3j08_A 524 VGDGI 528 (645)
T ss_dssp EECSS
T ss_pred EeCCH
Confidence 99995
No 8
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=7.1e-52 Score=456.00 Aligned_cols=330 Identities=20% Similarity=0.257 Sum_probs=262.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhcCe-----EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEec
Q 036987 98 YHDFIGIVIIINSTTSFKEENNAGN---AAAALMAQS-----YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEG 169 (478)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~l~~~~-----v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g 169 (478)
|++.+++++++..+..+++.+..+| +++++.++. |+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 6676666666667788888776654 345554433 99999999999999999999999999999999999999
Q ss_pred CcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeEEEEEEEee----ccccc--------------c------
Q 036987 170 DPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEIAAVVIANC----NGHLH--------------L------ 225 (478)
Q Consensus 170 ~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t~----~g~~~--------------~------ 225 (478)
++.||| |+|||||.|+.|.+|+.+|+||.+.+|.+.++|++|. .|++. +
T Consensus 253 -~~~Vde------S~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~ 325 (723)
T 3j09_A 253 -ESYVDE------SMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVV 325 (723)
T ss_dssp -CEEEEC------HHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHH
T ss_pred -CeEEec------ccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 789999 9999999999999999999999999999999999981 11100 0
Q ss_pred -------------------------------------------------------------cccceecchhHHhhhccee
Q 036987 226 -------------------------------------------------------------IQSAITKRMTAIEEMAGMD 244 (478)
Q Consensus 226 -------------------------------------------------------------~~~ilvk~~~~~e~lg~v~ 244 (478)
++|++||+++++|+||+++
T Consensus 326 ~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~ 405 (723)
T 3j09_A 326 AYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVT 405 (723)
T ss_dssp HHHHHHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCC
Confidence 9999999999999999999
Q ss_pred EEEecCccccccCchh-----------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEeecCCCCCceEEEEEEe
Q 036987 245 VLCSDKTGTLTLNKLT-----------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFLLFNPTDKRAAITYVD 313 (478)
Q Consensus 245 ~i~~DKTGTLT~~~~~-----------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~~F~s~~k~~sv~~~~ 313 (478)
++|||||||||+|+|+ ++++.+++.++..++ ||++.|+++++...........+|.+..++...
T Consensus 406 ~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~~~~~~~~~~~~~~g~g~~---- 480 (723)
T 3j09_A 406 AVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEGVV---- 480 (723)
T ss_dssp EEEEEHHHHTSCSCCEEEEEEESSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEE----
T ss_pred EEEEcCCCccccCceEEEEEEeCCCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhcCCCcCCccceEEecCCceE----
Confidence 9999999999999998 567888888887776 999999999874322111111222222221110
Q ss_pred CCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCc
Q 036987 314 GAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHH 393 (478)
Q Consensus 314 ~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~ 393 (478)
...+.+|+++.+.+... ..++.+.+..++++.+|+|++++|++. +++|+++++|++||
T Consensus 481 ----~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~va~~~-----------------~~~G~i~i~D~~~~ 538 (723)
T 3j09_A 481 ----ADGILVGNKRLMEDFGV-AVSNEVELALEKLEREAKTAVIVARNG-----------------RVEGIIAVSDTLKE 538 (723)
T ss_dssp ----ETTEEEECHHHHHHTTC-CCCHHHHHHHHHHHTTTCEEEEEEETT-----------------EEEEEEEEECCSCT
T ss_pred ----EEEEEECCHHHHHhcCC-CccHHHHHHHHHHHhcCCeEEEEEECC-----------------EEEEEEeecCCcch
Confidence 02467899988766442 334667788889999999999999876 99999999999999
Q ss_pred CcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhCCCEEEE
Q 036987 394 DSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDRKHISGM 473 (478)
Q Consensus 394 ~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~g~~V~m 473 (478)
+++++|+.. ++.|+...+.||+... ....+.+.++...+|++++|+||.++|+.||++ +.|+|
T Consensus 539 ~~~~~i~~l--------~~~Gi~v~~~TGd~~~--------~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~ 601 (723)
T 3j09_A 539 SAKPAVQEL--------KRMGIKVGMITGDNWR--------SAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAF 601 (723)
T ss_dssp THHHHHHHH--------HHTTCEEEEECSSCHH--------HHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEE
T ss_pred hHHHHHHHH--------HHCCCEEEEECCCCHH--------HHHHHHHHcCCcEEEccCCHHHHHHHHHHHhcC-CeEEE
Confidence 999999854 6677766665654321 344556666666789999999999999999988 89999
Q ss_pred eCCCC
Q 036987 474 TGDGT 478 (478)
Q Consensus 474 ~GDGv 478 (478)
+|||+
T Consensus 602 vGDg~ 606 (723)
T 3j09_A 602 VGDGI 606 (723)
T ss_dssp EECSS
T ss_pred EECCh
Confidence 99995
No 9
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.89 E-value=7e-24 Score=178.65 Aligned_cols=80 Identities=30% Similarity=0.503 Sum_probs=78.8
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEeccccccccccccCCceeecCCCCeeeeccEEeeeeE
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSALTGESLPVTKNPGDGVYSGSTCKQGEI 211 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~LTGEs~pv~K~~~~~v~aGt~v~~g~~ 211 (478)
|+|||+++.|++++|+|||+|.|++|++|||||+|++| .+.||| |+|||||.|+.|.+|+.+|+||.|.+|.+
T Consensus 16 v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g-~~~vde------S~LTGEs~pv~k~~g~~v~aGt~~~~G~~ 88 (113)
T 2hc8_A 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG-ESYVDE------SMISGEPVPVLKSKGDEVFGATINNTGVL 88 (113)
T ss_dssp EEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC-CEEEEC------HHHHCCSSCEEECTTCEECTTCEECSSCE
T ss_pred EEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-eEEEEc------cccCCCCccEEECCCCEEEeCCEEeeceE
Confidence 99999999999999999999999999999999999999 699999 99999999999999999999999999999
Q ss_pred EEEEEEe
Q 036987 212 AAVVIAN 218 (478)
Q Consensus 212 ~~~V~~t 218 (478)
.++|++|
T Consensus 89 ~~~V~~~ 95 (113)
T 2hc8_A 89 KIRATRV 95 (113)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999998
No 10
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.87 E-value=3.2e-23 Score=177.69 Aligned_cols=95 Identities=28% Similarity=0.420 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhhcCe-----EeeCCe------EEEEeCCCCCcCcEEEEcCCCeeeccEEEEecCcEEEecccccccccc
Q 036987 117 ENNAGNAAAALMAQS-----YLRDGR------WNEEDAAEMVPGDIISIKLGEIVSADARLVEGDPLKIDRFQFCLWSAL 185 (478)
Q Consensus 117 ~~~~~~~~~~l~~~~-----v~r~g~------~~~i~~~~lv~GDiv~v~~G~~IPaD~~vl~g~~~~vde~~~~~~S~L 185 (478)
++++.+++++|.++. |+|+|. ++.|++++|+|||+|.|++|++|||||+|++| ...||| |+|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g-~~~vde------S~L 74 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEG-HSMVDE------SLI 74 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSC-CCEEEC------TTT
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEc-cEEEEe------ccc
Confidence 345666677776655 889764 68999999999999999999999999999999 679999 999
Q ss_pred ccCCceeecCCCCeeeeccEEeeeeEEEEEEEe
Q 036987 186 TGESLPVTKNPGDGVYSGSTCKQGEIAAVVIAN 218 (478)
Q Consensus 186 TGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t 218 (478)
||||.|+.|.+|+.+|+||.|.+|.+.++|++|
T Consensus 75 TGEs~pv~k~~g~~v~aGt~~~~G~~~~~v~~~ 107 (124)
T 2kij_A 75 TGEAMPVAKKPGSTVIAGSINQNGSLLICATHV 107 (124)
T ss_dssp TCCSSCEECCTTEEECTTCEEESSCCEEEECSC
T ss_pred cCCCccEEeCCCCEEEcCCEEeeeEEEEEEEEe
Confidence 999999999999999999999999999999887
No 11
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.80 E-value=3.7e-19 Score=161.07 Aligned_cols=129 Identities=18% Similarity=0.227 Sum_probs=105.9
Q ss_pred HHHHHHHHHhccc--ccCChhhHHHHHHcCCc-------ceeeeEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHH
Q 036987 261 DMVVLMAARASTL--ENQVAIDGAIVSMLAGP-------KKARVHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILH 331 (478)
Q Consensus 261 ~~~l~~~~~~~~~--~~~~p~~~ai~~~~~~~-------~~~~~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~ 331 (478)
+.++.+++.++.. ...||+|.||+.++... ...+++.+||+|.+|||++++...+|.++.|+|||||.|++
T Consensus 16 ~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~ 95 (170)
T 3gwi_A 16 ERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILN 95 (170)
T ss_dssp HHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHH
Confidence 6788888888743 34699999999987531 22458999999999999999987678889999999999999
Q ss_pred hcc------------HHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCC
Q 036987 332 LAH------------KEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDP 390 (478)
Q Consensus 332 ~c~------------~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~ 390 (478)
+|+ ...++.+.+.++.|+++|+|||++||+.++..+... ....|++|+|+|+++|-|.
T Consensus 96 ~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~-~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 96 VCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY-QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp TEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCC-CGGGSCSEEEEEEEEEEC-
T ss_pred HhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcccc-CccccCCcEEEehhccccc
Confidence 997 356788999999999999999999999987543222 2345999999999999885
No 12
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.65 E-value=1.4e-20 Score=182.75 Aligned_cols=191 Identities=19% Similarity=0.216 Sum_probs=128.9
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh-------HHHHHHHHHhcccccCChhhHHHHHHcCCcceeeeEee
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKARVHFL 298 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~~~~~ 298 (478)
++||++|+++++|.|+++++||||||||||+|+|. ++++.+++..+..+. ||+..|+..++...........
T Consensus 11 ~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~~~~~~l~~~~~~e~~s~-hp~a~ai~~~~~~~g~~~~~~~ 89 (263)
T 2yj3_A 11 HKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFIGDSLSLAYAASVEALSS-HPIAKAIVKYAKEQGVKILEVK 89 (263)
Confidence 88999999999999999999999999999999997 245666777766666 9999999887643221000000
Q ss_pred cCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCC
Q 036987 299 LFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGP 378 (478)
Q Consensus 299 ~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~ 378 (478)
.|.......... ..++ ..+..|+++ +|.+ +.++++.
T Consensus 90 ~~~~~~G~g~~~--~~~~--~~~~~G~~~-----------------------~~~~-~~~~~~~---------------- 125 (263)
T 2yj3_A 90 DFKEISGIGVRG--KISD--KIIEVKKAE-----------------------NNND-IAVYING---------------- 125 (263)
Confidence 111100000000 0000 111112211 3445 5666665
Q ss_pred cEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHH
Q 036987 379 WEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKY 458 (478)
Q Consensus 379 l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~ 458 (478)
.+.|.+.+.|+++|++.++|+.. ++.|+...++|++.- . ....+.+.++...+|+.+.|++|.
T Consensus 126 -~~~~~~~~~~~~~~g~~~~l~~L--------~~~g~~~~i~T~~~~-----~---~~~~~~~~~gl~~~f~~~~p~~k~ 188 (263)
T 2yj3_A 126 -EPIASFNISDVPRPNLKDYLEKL--------KNEGLKIIILSGDKE-----D---KVKELSKELNIQEYYSNLSPEDKV 188 (263)
Confidence 78999999999999999999855 566776555555321 1 233344444555679999999999
Q ss_pred HHHHHHHhCCCEEEEeCCCC
Q 036987 459 EIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 459 ~iV~~lq~~g~~V~m~GDGv 478 (478)
.+++.++..+..|+|+|||+
T Consensus 189 ~~~~~l~~~~~~~~~VGD~~ 208 (263)
T 2yj3_A 189 RIIEKLKQNGNKVLMIGDGV 208 (263)
Confidence 99999999888999999984
No 13
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.68 E-value=9e-17 Score=157.68 Aligned_cols=208 Identities=21% Similarity=0.280 Sum_probs=146.8
Q ss_pred cccceecchhHHhhhcceeEEEecCccccccCchh-----------HHHHHHHHHhcccccCChhhHHHHHHcCCcceee
Q 036987 226 IQSAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-----------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKAR 294 (478)
Q Consensus 226 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-----------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~~ 294 (478)
++||++|+++++|+++++++||||||||||.+.+. +.++.+++.++..+. ||++.|+..++.....
T Consensus 15 ~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~-hp~~~a~~~~~~~~g~-- 91 (287)
T 3a1c_A 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGI-- 91 (287)
T ss_dssp CCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHHTTC--
T ss_pred HCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCC-CHHHHHHHHHHHhcCC--
Confidence 89999999999999999999999999999999885 457778888877666 9999999887643221
Q ss_pred eEeecCCCCCceEEEEEEeCCCeE-EEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCC
Q 036987 295 VHFLLFNPTDKRAAITYVDGAGIM-HRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKD 373 (478)
Q Consensus 295 ~~~~~F~s~~k~~sv~~~~~~g~~-~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~ 373 (478)
+..+....... .+.+-. ..+.+|+++.+.+.+. ..++.+....+.+..+|.++++++++.
T Consensus 92 ----~~~~~~~~~~~---~G~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~i~~~~d~----------- 152 (287)
T 3a1c_A 92 ----ELGEPEKVEVI---AGEGVVADGILVGNKRLMEDFGV-AVSNEVELALEKLEREAKTAVIVARNG----------- 152 (287)
T ss_dssp ----CCCCCSCEEEE---TTTEEEETTEEEECHHHHHHTTC-CCCHHHHHHHHHHHHTTCEEEEEEETT-----------
T ss_pred ----Cccccccceee---cCCCeEEEEEEECCHHHHHhcCC-CccHHHHHHHHHHHhCCCeEEEEEECC-----------
Confidence 10011111110 001100 2245677766543221 111345556677888999999999876
Q ss_pred CCCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecC
Q 036987 374 NPGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLF 453 (478)
Q Consensus 374 ~~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~ 453 (478)
.+++.+...++++|++.++++.. ++.|+...+.|+... . ....+.+.++...+|....
T Consensus 153 ------~~~~~~~~~~~~~~g~~~~l~~L--------~~~g~~~~i~T~~~~-----~---~~~~~l~~~gl~~~f~~i~ 210 (287)
T 3a1c_A 153 ------RVEGIIAVSDTLKESAKPAVQEL--------KRMGIKVGMITGDNW-----R---SAEAISRELNLDLVIAEVL 210 (287)
T ss_dssp ------EEEEEEEEECCBCTTHHHHHHHH--------HHTTCEEEEECSSCH-----H---HHHHHHHHHTCSEEECSCC
T ss_pred ------EEEEEEEeccccchhHHHHHHHH--------HHCCCeEEEEeCCCH-----H---HHHHHHHHhCCceeeeecC
Confidence 89999999999999999999755 667776555554221 1 1223334445556899999
Q ss_pred hHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 454 PEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 454 Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
|+.|...++.|+.. ..++|+||+.
T Consensus 211 ~~~K~~~~~~l~~~-~~~~~vGDs~ 234 (287)
T 3a1c_A 211 PHQKSEEVKKLQAK-EVVAFVGDGI 234 (287)
T ss_dssp TTCHHHHHHHHTTT-CCEEEEECTT
T ss_pred hHHHHHHHHHHhcC-CeEEEEECCH
Confidence 99999999999888 8899999984
No 14
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.33 E-value=3.4e-12 Score=123.13 Aligned_cols=199 Identities=24% Similarity=0.279 Sum_probs=133.3
Q ss_pred ecchhHHhhhcceeEEEecCccccccCchh-----------HHHHHHHHHhcccccCChhhHHHHHHcCCccee-----e
Q 036987 231 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLT-----------DMVVLMAARASTLENQVAIDGAIVSMLAGPKKA-----R 294 (478)
Q Consensus 231 vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~-----------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~~~~-----~ 294 (478)
+|+++++|.|++++.||||++||||.|+++ ..++.+++.++..+. |++..++.+++...... .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~a~~~~~~~~g~~~~~~~~ 79 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSE-HPIAAAIVEEAEKRGFGLTEVEE 79 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCCCEE
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCC-CHHHHHHHHHHHhcCCCCCCccc
Confidence 588999999999999999999999997765 567777777766665 89999888776432110 0
Q ss_pred eEeecCCCCCceEEEEEEeCCCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCC
Q 036987 295 VHFLLFNPTDKRAAITYVDGAGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDN 374 (478)
Q Consensus 295 ~~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~ 374 (478)
+..++ . ......+ ++. .+..|+++.+...+. .. ......+...+.+.+.+++..
T Consensus 80 ~~~~~---g-~~~~~~~---~~~--~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~------------ 133 (280)
T 3skx_A 80 FRAIP---G-KGVEGIV---NGR--RYMVVSPGYIRELGI-KT----DESVEKLKQQGKTVVFILKNG------------ 133 (280)
T ss_dssp EEEET---T-TEEEEEE---TTE--EEEEECHHHHHHTTC-CC----CTTHHHHHTTTCEEEEEEETT------------
T ss_pred eeecC---C-CEEEEEE---CCE--EEEEecHHHHHHcCC-Cc----hHHHHHHHhCCCeEEEEEECC------------
Confidence 11111 1 1111111 332 344578777655442 11 123445667888888888876
Q ss_pred CCCCcEEEEEeecCCCCCcCcHHHHHHhHHHHHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecCh
Q 036987 375 PGGPWEFVGLLPLFDPPHHDSAETISDQIAIAKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFP 454 (478)
Q Consensus 375 ~e~~l~~lG~i~~~D~lR~~~~~~I~D~~~tA~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~P 454 (478)
.++|.+.+.++++|++.++++.. ++.|+...+.|+.. .. ....+.+.++....|..+.|
T Consensus 134 -----~~~~~~~~~~~~~~~~~~~l~~l--------~~~g~~~~i~T~~~-----~~---~~~~~~~~~gl~~~f~~~~~ 192 (280)
T 3skx_A 134 -----EVSGVIALADRIRPESREAISKL--------KAIGIKCMMLTGDN-----RF---VAKWVAEELGLDDYFAEVLP 192 (280)
T ss_dssp -----EEEEEEEEEEEECTTHHHHHHHH--------HHTTCEEEEECSSC-----HH---HHHHHHHHHTCSEEECSCCG
T ss_pred -----EEEEEEEecCCCCHhHHHHHHHH--------HHCCCEEEEEeCCC-----HH---HHHHHHHHcCChhHhHhcCH
Confidence 89999999999999999999755 66677554444421 11 12334444556678999999
Q ss_pred HHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 455 EHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 455 e~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.+|...++.+.+.. .++|+|||.
T Consensus 193 ~~k~~~~k~~~~~~-~~~~vGD~~ 215 (280)
T 3skx_A 193 HEKAEKVKEVQQKY-VTAMVGDGV 215 (280)
T ss_dssp GGHHHHHHHHHTTS-CEEEEECTT
T ss_pred HHHHHHHHHHHhcC-CEEEEeCCc
Confidence 99999999998876 568999984
No 15
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=99.21 E-value=1.7e-11 Score=108.73 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=88.0
Q ss_pred CccccccCchh------------HHHHHHHHHhcccccCChhhHHHHHHcCCc-cee-------eeEeecCCCCCceEEE
Q 036987 250 KTGTLTLNKLT------------DMVVLMAARASTLENQVAIDGAIVSMLAGP-KKA-------RVHFLLFNPTDKRAAI 309 (478)
Q Consensus 250 KTGTLT~~~~~------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~-~~~-------~~~~~~F~s~~k~~sv 309 (478)
..||+|-|++. +++|.++++++..+. ||+++||++++... ... .....+|++..++..+
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E~~Se-HPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~~Gv 91 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGI 91 (156)
T ss_dssp --------CEEEEEEEECTTSCHHHHHHHHHHTTSSCC-SHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTEEEE
T ss_pred CCCceecCCCeEEEEEecCCCCHHHHHHHHHHHhCcCC-CHHHHHHHHHHHHhcCCCcccccccccceeeccccCCCCeE
Confidence 46999998888 678999999987776 99999999987543 211 1234789998886666
Q ss_pred EEEeCCCeEEEEEeCcHHHHHHhccH---HHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEee
Q 036987 310 TYVDGAGIMHRVSKGAPEQILHLAHK---EIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLP 386 (478)
Q Consensus 310 ~~~~~~g~~~~~~KGa~e~i~~~c~~---~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~ 386 (478)
.+ +| ..+.+|+++.|.+++.+ ..+..+.+.+++++++|.+++++|.+. .++|+++
T Consensus 92 ~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-----------------~l~GvIa 149 (156)
T 1svj_A 92 NI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-----------------RVLGVIA 149 (156)
T ss_dssp EE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-----------------EEEEEEE
T ss_pred EE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-----------------EEEEEEE
Confidence 43 66 56889998877666641 123457788899999999999999876 8999999
Q ss_pred cCCCCCc
Q 036987 387 LFDPPHH 393 (478)
Q Consensus 387 ~~D~lR~ 393 (478)
+.|++||
T Consensus 150 laD~iK~ 156 (156)
T 1svj_A 150 LKDIVKG 156 (156)
T ss_dssp EEECCCC
T ss_pred EecCCCC
Confidence 9999996
No 16
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.58 E-value=7.2e-09 Score=101.65 Aligned_cols=84 Identities=11% Similarity=-0.124 Sum_probs=59.2
Q ss_pred CCCCCcCcHHHHH--------------HhHHHHHHHHHHcCCCCCCc--cccccccccccccCCcchHHHHh--hcCCEE
Q 036987 388 FDPPHHDSAETIS--------------DQIAIAKETGRKLGMGTNMY--LSSSLLRESKDETNSALPIDELI--EKADGF 449 (478)
Q Consensus 388 ~D~lR~~~~~~I~--------------D~~~tA~~ia~~~Gi~~~~~--~~~~~~g~~~~~~~~~~~~~~~l--~~~~v~ 449 (478)
.+++||+++++++ |+..++.++|+++|+...-. ....+.. +...+...+ +...+|
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~-------~~~~~~~~~~~~~i~~~ 211 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF-------DENGVLKGFKGELIHVF 211 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-------CTTSBEEEECSSCCCTT
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-------cccceeEeccccccchh
Confidence 5789999999999 78899999999999854210 0011111 111111111 223568
Q ss_pred EecChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 450 AGLFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 450 ar~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
++..|.+|...+..+++.|+.|+|+|||+
T Consensus 212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGi 240 (297)
T 4fe3_A 212 NKHDGALKNTDYFSQLKDNSNIILLGDSQ 240 (297)
T ss_dssp CHHHHHHTCHHHHHHTTTCCEEEEEESSG
T ss_pred hcccHHHHHHHHHHhhccCCEEEEEeCcH
Confidence 88899999999999999999999999996
No 17
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=98.40 E-value=8.2e-07 Score=80.82 Aligned_cols=120 Identities=14% Similarity=0.136 Sum_probs=78.6
Q ss_pred cccccCchh---------------HHHHHHHHHhcccccCChhhHHHHHHcCCc-cee-eeEeecCCCCCce-EEEEEEe
Q 036987 252 GTLTLNKLT---------------DMVVLMAARASTLENQVAIDGAIVSMLAGP-KKA-RVHFLLFNPTDKR-AAITYVD 313 (478)
Q Consensus 252 GTLT~~~~~---------------~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~-~~~-~~~~~~F~s~~k~-~sv~~~~ 313 (478)
||||+|++. +++|.+++.++..++ ||+++||++++... ... ......|.....+ ....+..
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~Gv~~~V~g 79 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTN 79 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETTTEEEEEECC
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEeccceEEEEECC
Confidence 899999987 357888999988887 99999999987432 110 0111233333222 2222211
Q ss_pred CCC-----------------------------------------------eEEEEEeCcHHHHHHhccHHHHHHHHHHHH
Q 036987 314 GAG-----------------------------------------------IMHRVSKGAPEQILHLAHKEIEKKVHGIID 346 (478)
Q Consensus 314 ~~g-----------------------------------------------~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~ 346 (478)
.++ +.+.+..|++++|.+..- ..++.+...+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi-~i~~~~~~~~~ 158 (185)
T 2kmv_A 80 IEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL-VINNDVNDFMT 158 (185)
T ss_dssp SGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC-CCCHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC-CCCHHHHHHHH
Confidence 000 115778899999865431 22234555667
Q ss_pred HHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCC
Q 036987 347 KFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDP 390 (478)
Q Consensus 347 ~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~ 390 (478)
.+..+|..++.+|.++ .++|++++.|+
T Consensus 159 ~~~~~G~T~V~vaidg-----------------~l~g~iavaD~ 185 (185)
T 2kmv_A 159 EHERKGRTAVLVAVDD-----------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHTTCEEEEEEETT-----------------EEEEEEEEECC
T ss_pred HHHhCCCeEEEEEECC-----------------EEEEEEEEEcC
Confidence 7888999999999887 89999999995
No 18
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=97.74 E-value=6.4e-05 Score=66.94 Aligned_cols=110 Identities=13% Similarity=0.067 Sum_probs=69.1
Q ss_pred HHHHHHHHHhcccccCChhhHHHHHHcCCc-cee-eeEeecCCCCCce-EEEEEEeC-----------------------
Q 036987 261 DMVVLMAARASTLENQVAIDGAIVSMLAGP-KKA-RVHFLLFNPTDKR-AAITYVDG----------------------- 314 (478)
Q Consensus 261 ~~~l~~~~~~~~~~~~~p~~~ai~~~~~~~-~~~-~~~~~~F~s~~k~-~sv~~~~~----------------------- 314 (478)
+++|.+++.++..++ ||+++||++++... ... ....-.|.....+ +...+...
T Consensus 23 ~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~ 101 (165)
T 2arf_A 23 RKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGS 101 (165)
T ss_dssp HHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETTTEEEEEEECHHHHHSCCCCCCCCCCCCSSSSCC
T ss_pred HHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecCccEEEEEcCcccccccccccccccccccccccc
Confidence 468889999998888 99999999987432 100 0011223332222 22222211
Q ss_pred -------CCeEEEEEeCcHHHHHHhccHHHHHHHHHHHHHHhhccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeec
Q 036987 315 -------AGIMHRVSKGAPEQILHLAHKEIEKKVHGIIDKFAECGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPL 387 (478)
Q Consensus 315 -------~g~~~~~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 387 (478)
....+.+..|+++.|.+..- ..+..+...+..+..+|..++++|.++ .++|++++
T Consensus 102 ~~~~~~~~~~~~~v~iGn~~~m~~~gi-~~~~~~~~~~~~~~~~G~T~v~va~dg-----------------~~~g~i~l 163 (165)
T 2arf_A 102 LPAEKDAVPQTFSVLIGNREWLRRNGL-TISSDVSDAMTDHEMKGQTAILVAIDG-----------------VLCGMIAI 163 (165)
T ss_dssp CCCCCCCCCCEEEEEEECHHHHHHHHC-SSCHHHHHHHHHHHTTTSEEEEEEETT-----------------EEEEEEEE
T ss_pred cccccccCCCceEEEEcCHHHHHhcCC-CCCHHHHHHHHHHHhCCCeEEEEEECC-----------------EEEEEEEE
Confidence 01124677899998765321 123344555667778899999999887 89999999
Q ss_pred CC
Q 036987 388 FD 389 (478)
Q Consensus 388 ~D 389 (478)
.|
T Consensus 164 ~D 165 (165)
T 2arf_A 164 AD 165 (165)
T ss_dssp CC
T ss_pred EC
Confidence 87
No 19
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=62.73 E-value=6.3 Score=34.94 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=27.0
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcCCCeeecc
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKLGEIVSAD 163 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~G~~IPaD 163 (478)
+.++|....+++++|.+||.|.+..|..++.|
T Consensus 107 v~~~g~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 107 ISKTGEVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp EEETTEEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred EeCCCeEEEEEhhcCCCCCEEEecccCCccce
Confidence 66778889999999999999999877666655
No 20
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=50.43 E-value=12 Score=32.95 Aligned_cols=30 Identities=30% Similarity=0.417 Sum_probs=25.5
Q ss_pred EeeCCeEEEEeCCCCCcCcEEEEcCCCeee
Q 036987 132 YLRDGRWNEEDAAEMVPGDIISIKLGEIVS 161 (478)
Q Consensus 132 v~r~g~~~~i~~~~lv~GDiv~v~~G~~IP 161 (478)
+.++|....+.+++|.+||.|.+..++..|
T Consensus 97 v~~~g~~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 97 VYENGRFIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp EEETTEEEEEEGGGCCTTCEEEECCCCCSC
T ss_pred EecCCeEEEEEHHHCCCCCEEEEccccccc
Confidence 667888899999999999999998766433
No 21
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=36.12 E-value=13 Score=35.79 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 454 PEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 454 Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
|+-...+.+.+.-....+.|+|||.
T Consensus 247 ~~~~~~~~~~lgi~~~~~v~vGDs~ 271 (335)
T 3n28_A 247 ADILLTLAQQYDVEIHNTVAVGDGA 271 (335)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCH
Confidence 3444444444443446799999983
No 22
>2wwb_A Protein transport protein SEC61 subunit alpha ISO; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=33.01 E-value=2.3e+02 Score=28.81 Aligned_cols=79 Identities=13% Similarity=0.092 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHhcCCCccCCCC---chHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHH
Q 036987 38 LTSDDVKERLNLFGYNRLEGKK---ESKILKYLGCMCNPLSWVMEAAAIMAIALAHGGGKDPDYHDFIGIVIIINSTTSF 114 (478)
Q Consensus 38 Ls~~~v~~r~~~~G~N~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 114 (478)
.+.+|+++++++.|.=-.-..+ .+.+.+.+..+.-+=.+++-+.+++..+++ .+.-+..+++++....++
T Consensus 385 ~np~dvA~~Lkk~G~~IpGiRp~~T~~yL~~vi~rit~~Ga~~l~~lavlp~~l~-------~~~gGTslLI~Vgv~~~~ 457 (476)
T 2wwb_A 385 SSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLG-------AIGSGTGILLAVTIIYQY 457 (476)
T ss_dssp CCHHHHHHHHHHHCTTTCCCCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CSSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhcchHHHHHHHHHHHHH
Confidence 7999999999999864332222 222233322222212233333334444432 334577777788888999
Q ss_pred HHHHHHHHH
Q 036987 115 KEENNAGNA 123 (478)
Q Consensus 115 ~~~~~~~~~ 123 (478)
+++...++.
T Consensus 458 ~e~i~~e~~ 466 (476)
T 2wwb_A 458 FEIFVKEQS 466 (476)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 998886653
No 23
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=29.81 E-value=18 Score=32.52 Aligned_cols=60 Identities=8% Similarity=-0.005 Sum_probs=36.9
Q ss_pred HHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhC----CCEEEEeCCCC
Q 036987 409 TGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDR----KHISGMTGDGT 478 (478)
Q Consensus 409 ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~----g~~V~m~GDGv 478 (478)
-.++.|+...+.|++.. . ....+.+.++...+|... ..|...++.+.++ ...++|+||+.
T Consensus 87 ~L~~~G~~l~I~T~~~~-----~---~~~~~l~~lgi~~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~ 150 (211)
T 3ij5_A 87 CLITSDIDVAIITGRRA-----K---LLEDRANTLGITHLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDL 150 (211)
T ss_dssp HHHHTTCEEEEECSSCC-----H---HHHHHHHHHTCCEEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHCCCEEEEEeCCCH-----H---HHHHHHHHcCCchhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCH
Confidence 33777876555554321 1 223444455555677777 5578888877654 46799999984
No 24
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=27.40 E-value=12 Score=32.96 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=35.1
Q ss_pred HHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEec--ChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 408 ETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGL--FPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 408 ~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~--~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
.-.++.|+...+.|+... . ....+.+.++...+|... .|+-...+++.+.-....++|+||+.
T Consensus 56 ~~L~~~g~~~~ivTn~~~-----~---~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~ 120 (191)
T 3n1u_A 56 KLLMAAGIQVAIITTAQN-----A---VVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDL 120 (191)
T ss_dssp HHHHHTTCEEEEECSCCS-----H---HHHHHHHHHTCCEEECSCSSCHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHCCCeEEEEeCcCh-----H---HHHHHHHHcCCccceeCCCChHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 334777876555554211 1 123334444555567766 45555555555554456799999973
No 25
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=26.27 E-value=23 Score=30.91 Aligned_cols=63 Identities=14% Similarity=0.076 Sum_probs=0.0
Q ss_pred HHHHHHHcCCCCCCccccccccccccccCCcchHHHHhhcCCEEEecChHHHHHHHHHHHhC----CCEEEEeCCCC
Q 036987 406 AKETGRKLGMGTNMYLSSSLLRESKDETNSALPIDELIEKADGFAGLFPEHKYEIVRRLHDR----KHISGMTGDGT 478 (478)
Q Consensus 406 A~~ia~~~Gi~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K~~iV~~lq~~----g~~V~m~GDGv 478 (478)
+..-.++.|+...+.|+..-. ....+.+.++...+|... ..|...++.+.++ ...++|+||+.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~--------~~~~~~~~lgl~~~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~ 120 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTA--------IVERRAKSLGIEHLFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDL 120 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCH--------HHHHHHHHHTCSEEECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHCCCEEEEEECcChH--------HHHHHHHHcCCHHHhcCc--CChHHHHHHHHHHcCCChhHEEEECCCH
No 26
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=24.95 E-value=45 Score=28.01 Aligned_cols=22 Identities=5% Similarity=-0.111 Sum_probs=19.4
Q ss_pred CeEEEEeCCCCCcCcEEEEcCC
Q 036987 136 GRWNEEDAAEMVPGDIISIKLG 157 (478)
Q Consensus 136 g~~~~i~~~~lv~GDiv~v~~G 157 (478)
|....+.+++|++||.|.+..|
T Consensus 82 ~~~~~v~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 82 QKLTFVFADRIEEKNQVLVRDV 103 (145)
T ss_dssp TEEEEEEGGGCCTTCEEEEECT
T ss_pred CcEEEEEHHHCcCCCEEEEecC
Confidence 4478899999999999999877
No 27
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=24.40 E-value=11 Score=33.46 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=0.0
Q ss_pred ccceeeEEEeeeccccccCCCCCCCCCCcEEEEEeecCCCCCcCcHHH-------HHHhHHHHHHHHHHcCCCCCCcccc
Q 036987 351 CGLRSLAVAWQVINLCRKRGTKDNPGGPWEFVGLLPLFDPPHHDSAET-------ISDQIAIAKETGRKLGMGTNMYLSS 423 (478)
Q Consensus 351 ~G~r~l~~A~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lR~~~~~~-------I~D~~~tA~~ia~~~Gi~~~~~~~~ 423 (478)
++++.+.|-.++ +++.--...++.++++++. |+.. ++.|+...+.|+.
T Consensus 23 ~~ik~vifD~DG-----------------tL~d~~~~~~~~~~~~~~~~~~d~~~l~~L--------~~~G~~~~ivT~~ 77 (195)
T 3n07_A 23 KQIKLLICDVDG-----------------VFSDGLIYMGNQGEELKTFHTRDGYGVKAL--------MNAGIEIAIITGR 77 (195)
T ss_dssp HTCCEEEECSTT-----------------TTSCSCCEECTTSCEECCCCTTHHHHHHHH--------HHTTCEEEEECSS
T ss_pred hCCCEEEEcCCC-----------------CcCCCcEEEccCchhhheeecccHHHHHHH--------HHCCCEEEEEECc
Q ss_pred ccccccccccCCcchHHHHhhcCCEEEecChHHH--HHHHHHHHhCCCEEEEeCCC
Q 036987 424 SLLRESKDETNSALPIDELIEKADGFAGLFPEHK--YEIVRRLHDRKHISGMTGDG 477 (478)
Q Consensus 424 ~~~g~~~~~~~~~~~~~~~l~~~~v~ar~~Pe~K--~~iV~~lq~~g~~V~m~GDG 477 (478)
.-. ....+.+.++...+|....|.-. ..+.+.+.-....++|+||+
T Consensus 78 ~~~--------~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~ 125 (195)
T 3n07_A 78 RSQ--------IVENRMKALGISLIYQGQDDKVQAYYDICQKLAIAPEQTGYIGDD 125 (195)
T ss_dssp CCH--------HHHHHHHHTTCCEEECSCSSHHHHHHHHHHHHCCCGGGEEEEESS
T ss_pred CHH--------HHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHhCCCHHHEEEEcCC
No 28
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=23.48 E-value=31 Score=29.74 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=17.6
Q ss_pred HhhhcceeEEEecCccccccCchh
Q 036987 237 IEEMAGMDVLCSDKTGTLTLNKLT 260 (478)
Q Consensus 237 ~e~lg~v~~i~~DKTGTLT~~~~~ 260 (478)
-|.+..+..|++|--||||.+...
T Consensus 3 ~~~~~~ikliv~D~DGtL~d~~~~ 26 (168)
T 3ewi_A 3 KEKLKEIKLLVCNIDGCLTNGHIY 26 (168)
T ss_dssp ----CCCCEEEEECCCCCSCSCCB
T ss_pred hhhHhcCcEEEEeCccceECCcEE
Confidence 367788999999999999987543
No 29
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=23.21 E-value=72 Score=26.50 Aligned_cols=21 Identities=14% Similarity=0.409 Sum_probs=17.6
Q ss_pred EEEeCCCCCcCcEEEEcCCCe
Q 036987 139 NEEDAAEMVPGDIISIKLGEI 159 (478)
Q Consensus 139 ~~i~~~~lv~GDiv~v~~G~~ 159 (478)
..|+.++++|||+|..+.|..
T Consensus 61 ~~V~~~~l~pGDLvFf~~~~~ 81 (135)
T 2k1g_A 61 KSVSRSNLRTGDLVLFRAGST 81 (135)
T ss_dssp EEECGGGCCTTEEEEEEETTT
T ss_pred cEecHHHccCCcEEEECCCCC
Confidence 567889999999999987654
No 30
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=21.89 E-value=56 Score=28.03 Aligned_cols=27 Identities=15% Similarity=-0.043 Sum_probs=23.6
Q ss_pred cChHHHHHHHHHHHhCCCEEEEeCCCC
Q 036987 452 LFPEHKYEIVRRLHDRKHISGMTGDGT 478 (478)
Q Consensus 452 ~~Pe~K~~iV~~lq~~g~~V~m~GDGv 478 (478)
-.|+.|...++.+......+.|+||+.
T Consensus 129 p~p~~~~~~l~~l~~~~~~~~~iGD~~ 155 (206)
T 1rku_A 129 RQKDPKRQSVIAFKSLYYRVIAAGDSY 155 (206)
T ss_dssp CSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCchHHHHHHHHHhcCCEEEEEeCCh
Confidence 468899999999988888999999973
No 31
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=21.61 E-value=30 Score=36.53 Aligned_cols=22 Identities=23% Similarity=0.478 Sum_probs=19.1
Q ss_pred EeCCCCCcCcEEEE-cCCCeeec
Q 036987 141 EDAAEMVPGDIISI-KLGEIVSA 162 (478)
Q Consensus 141 i~~~~lv~GDiv~v-~~G~~IPa 162 (478)
|.-.+|.+||.|.| ++||+||-
T Consensus 374 i~~~di~iGD~V~V~rAGdVIP~ 396 (615)
T 3sgi_A 374 IKRKGVLIGDTVVIRKAGDVIPE 396 (615)
T ss_dssp TTTTCCCBTCEEEEECCSSSSCC
T ss_pred HHHcCCCCCCEEEEEEcCCCccc
Confidence 56778999999999 57999996
Done!