Query 036992
Match_columns 539
No_of_seqs 136 out of 643
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 07:29:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036992.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036992hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1278 Endosomal membrane pro 100.0 1E-180 3E-185 1403.5 46.9 533 2-539 58-628 (628)
2 KOG1277 Endosomal membrane pro 100.0 2E-163 4E-168 1245.0 39.5 529 1-539 55-593 (593)
3 PF02990 EMP70: Endomembrane p 100.0 4E-148 8E-153 1214.0 41.7 492 2-497 2-521 (521)
4 PF11368 DUF3169: Protein of u 81.9 15 0.00033 36.9 11.1 37 313-356 200-236 (248)
5 PF12670 DUF3792: Protein of u 78.5 6 0.00013 35.1 6.1 80 243-326 7-86 (116)
6 PF06609 TRI12: Fungal trichot 74.3 1.1E+02 0.0024 35.0 16.2 63 245-316 143-205 (599)
7 PF02990 EMP70: Endomembrane p 72.4 1.7E+02 0.0037 32.8 17.6 121 401-529 334-481 (521)
8 PF06570 DUF1129: Protein of u 72.2 48 0.001 32.3 11.2 121 397-531 77-200 (206)
9 PRK11339 abgT putative aminobe 66.5 28 0.00061 38.8 9.0 51 247-297 265-326 (508)
10 PF07331 TctB: Tripartite tric 64.1 40 0.00086 30.2 8.3 23 302-325 110-132 (141)
11 PF13347 MFS_2: MFS/sugar tran 53.3 83 0.0018 33.5 9.8 81 219-305 209-291 (428)
12 PF06570 DUF1129: Protein of u 49.5 97 0.0021 30.1 8.8 45 255-302 91-135 (206)
13 TIGR02973 nitrate_rd_NapE peri 48.1 29 0.00063 25.3 3.5 34 303-336 2-35 (42)
14 PF06796 NapE: Periplasmic nit 46.5 26 0.00056 27.2 3.2 35 302-336 14-48 (56)
15 PF08055 Trp_leader1: Tryptoph 44.4 7.3 0.00016 22.6 -0.0 9 461-469 5-13 (18)
16 KOG2568 Predicted membrane pro 41.8 21 0.00046 39.7 2.9 163 234-445 265-436 (518)
17 TIGR02972 TMAO_torE trimethyla 40.6 35 0.00075 25.5 3.0 34 303-336 7-40 (47)
18 PF05297 Herpes_LMP1: Herpesvi 38.9 10 0.00022 38.8 0.0 48 273-320 102-151 (381)
19 PF03806 ABG_transport: AbgT p 35.6 2.5E+02 0.0054 31.4 10.0 150 175-338 200-359 (502)
20 KOG4812 Golgi-associated prote 32.1 1.4E+02 0.003 30.1 6.6 71 245-332 157-246 (262)
21 KOG1289 Amino acid transporter 29.4 3.2E+02 0.0069 30.9 9.5 49 177-225 196-248 (550)
22 COG1575 MenA 1,4-dihydroxy-2-n 29.3 2.6E+02 0.0056 29.2 8.3 29 277-307 149-177 (303)
23 PF12271 Chs3p: Chitin synthas 28.1 6.9E+02 0.015 26.0 11.1 122 247-369 118-247 (293)
24 smart00767 DCD DCD is a plant 27.7 52 0.0011 30.0 2.6 39 27-73 72-110 (132)
25 PF12823 DUF3817: Domain of un 27.6 21 0.00046 30.4 0.1 25 393-417 64-88 (92)
26 PF09605 Trep_Strep: Hypotheti 27.6 2E+02 0.0043 27.6 6.9 21 350-370 158-178 (186)
27 PF07240 Turandot: Stress-indu 26.3 37 0.00079 28.7 1.3 31 54-84 27-57 (85)
28 TIGR00895 2A0115 benzoate tran 26.3 88 0.0019 31.9 4.5 28 277-304 288-315 (398)
29 TIGR00819 ydaH p-Aminobenzoyl- 26.0 4.2E+02 0.0092 29.8 9.8 50 247-297 267-328 (513)
30 PF07672 MFS_Mycoplasma: Mycop 25.8 7.4E+02 0.016 25.4 11.4 41 275-315 142-183 (267)
31 TIGR00894 2A0114euk Na(+)-depe 24.5 1.8E+02 0.004 31.1 6.7 18 281-298 308-325 (465)
32 COG5393 Predicted membrane pro 23.6 87 0.0019 28.0 3.2 25 268-292 77-102 (131)
33 COG2814 AraJ Arabinose efflux 22.2 8.3E+02 0.018 26.5 11.0 108 176-300 163-273 (394)
34 TIGR00893 2A0114 d-galactonate 21.7 3.1E+02 0.0067 27.5 7.5 26 280-305 257-282 (399)
35 KOG1278 Endosomal membrane pro 21.7 1.2E+03 0.027 26.5 16.1 113 410-527 408-544 (628)
36 PF09183 DUF1947: Domain of un 21.6 93 0.002 24.9 2.7 19 55-73 5-23 (65)
37 PF14093 DUF4271: Domain of un 21.2 7.3E+02 0.016 23.7 10.4 16 282-297 88-103 (208)
38 TIGR00822 EII-Sor PTS system, 21.0 1.5E+02 0.0033 30.3 4.9 90 357-464 152-246 (265)
No 1
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-180 Score=1403.47 Aligned_cols=533 Identities=36% Similarity=0.721 Sum_probs=506.1
Q ss_pred CcCCCCCCCCCCCCCCcccCCchhhhcCCcccccceEEEeccccccccccccccCHHHHHHHHHHHHhcceEEEEecCcc
Q 036992 2 TYQYYDLPFCRPEPIKWKKETLGEVLNGDRLASALYELKFLEAKTGVTLCSKKLKVDEVAKFRKAVADDFYFQMYYDDLP 81 (539)
Q Consensus 2 ~y~Yy~lpfC~p~~~~~~~~slGe~L~Gdr~~~S~y~i~f~~~~~c~~lC~~~~t~~~~~~~~~~I~~~Y~~~~~iD~LP 81 (539)
||+||++|||+|++.++++|||||+|+|||++||||+++|++|++|+.+|+.++++++++.++|+|+++|++||.+||||
T Consensus 58 pY~YY~~~Fc~p~~i~~~~EnLGeVl~GDRi~nSPy~~~m~e~~~C~~lC~~k~~~~~~~~l~~~I~~~Y~v~wivDnlP 137 (628)
T KOG1278|consen 58 PYEYYSLPFCRPEKIKKQSENLGEVLRGDRIENSPYKFKMLENQPCETLCATKLDKEDAKLLKKLIREGYVVNWIVDNLP 137 (628)
T ss_pred CcccccccccCccccCCcccchhceeccCcccCCCceEecccCCcchhhhcccCCHHHHHHHHHHHhhccEeeeeecCCc
Confidence 89999999999999899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecccc------cCcccccc----cCCeEEEeeeEEEEEEEeC-----CeEEEEEEEeCCC-------------Ccc
Q 036992 82 IWGYIGKIE------DGSLVLSE----KGNKYYLFTRVQFDALYNG-----DQVVEIRAFSDPT-------------SVV 133 (539)
Q Consensus 82 ~~~~~g~~~------~~~~~~~~----~~~~~~l~NH~~f~I~yn~-----~~IV~~~v~~~~~-------------~~~ 133 (539)
++......+ +.|+|+|. +.+++|++||++|+|+||+ +|||||||+|.+. .++
T Consensus 138 va~~~~~~~~~~~~y~~GfplG~~~~~~~~~~y~~NHl~~~i~yH~~~~~~~riVgfeV~P~Si~~~~~~~~~~~~~~~c 217 (628)
T KOG1278|consen 138 VATRYERSDDGKVYYGTGFPLGFKGPKDEDKYYLHNHLDFVIRYHRDDNDKYRIVGFEVKPVSIKHEHEKGDSKNSLPTC 217 (628)
T ss_pred eeEEEeecCCCceEeccCccceeccCCCccceeEeeeEEEEEEEEecCCCceEEEEEEEEeeeeecccCCCcccccCCcc
Confidence 876543322 34677763 4568899999999999995 4999999998542 123
Q ss_pred cc-------CCCCceeEEEEEEEEEeecCcccchhhhhhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 036992 134 DI-------TDDIEINVKFTYSIVWSETSAQFETRMDKYSRASSLPTLHKIHWFSFINSIVFILLLMGLLILLILRRLKN 206 (539)
Q Consensus 134 ~~-------~~~~~~~i~fTYSV~w~~s~~~w~~Rwd~y~~~~~~~~~~~ihw~SiiNS~vivl~l~~~v~~Il~r~l~~ 206 (539)
++ ++++++++.|||||+|+|+|++|++|||.|+++. +.|||||||+||+++|++|+++|++|++|||||
T Consensus 218 ~~~~~~~~~~e~~~~~i~fTYsV~f~esdi~WasRWD~yL~m~----~~qIhWfSIiNSlvIVlfLSgiv~mI~lRtl~r 293 (628)
T KOG1278|consen 218 SIPEKPLELDEGEETEIVFTYSVKFEESDIKWASRWDYYLHME----DVQIHWFSIINSLVIVLFLSGIVAMIMLRTLYR 293 (628)
T ss_pred cCCCCccccCCCCceEEEEEEEEEEEeccCcchhhHHHHhcCC----CCceEEEehhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3345678999999999999999999999999854 679999999999999999999999999999999
Q ss_pred hhhccCCCCc--chhhccCceEEecccCCCCCCccceeeeecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHH
Q 036992 207 DLRKCSSGDE--EEDKEVGWKYIHGDVFRYPQNISLFSAVMGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYS 284 (539)
Q Consensus 207 D~~~y~~~~~--~~~ee~GWKlvhgDVFR~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~ 284 (539)
|++|||++|. |.+||+|||+|||||||||+++++||++||+|+|+++|+++++++|++|+++|++||+++|+++++|+
T Consensus 294 DiarYne~d~~~d~~Ee~GWKLVhGDVFR~P~~~~lLsv~vGsGvQ~l~M~~vti~fA~lGflSPs~RGsLmT~~~~l~v 373 (628)
T KOG1278|consen 294 DIARYNELDLDDDAQEESGWKLVHGDVFRPPRNSMLLSVLVGSGVQLLGMILVTIFFACLGFLSPSSRGSLMTAMVLLFV 373 (628)
T ss_pred hHhhhccccchhhhhhhcceEEeecccccCCCCCeEEEEEeccChhhhHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence 9999999665 34999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhhhcCCcchhHHHHHHhhhhhHHHHHHHHHHHHHHHHhCCCCCcChhHHHHHHHHHHHhhhhhhhhh
Q 036992 285 LTSVVAGYITSSFHNQFSDAGWERSVFLAGILYFGPLTVTVLILNTVAVSYGATAALPFGTIMVIVFIYMLFAVPLLALG 364 (539)
Q Consensus 285 ~~~~i~Gy~s~~~yk~~~g~~W~~~~~lt~~l~P~~~~~~~~~~N~i~~~~~Ss~aipf~ti~~l~~lw~~v~~PL~~lG 364 (539)
++|++|||+|+|+||+++|++||+++++|++++||+++++++++|++.|+++||+|+||+|+++++++|++||+||+++|
T Consensus 374 ~~G~~agY~s~rlyk~~~g~~wk~~~~lta~l~PGivf~~~f~lN~~lW~~~SSgAvPF~T~~~ll~LwF~isVPLsf~G 453 (628)
T KOG1278|consen 374 FMGFVAGYVSARLYKTFKGREWKRNAILTAFLFPGIVFAIFFVLNFFLWGKHSSGAVPFSTMVALLFLWFGISVPLSFVG 453 (628)
T ss_pred HHHHhhhhhhhhhHhhhcCCcchhhHHhhhhhcchHHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhhHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhccccccCCCCCcccCCCCCCCCCCCCccCccchhhhcchhhHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHH
Q 036992 365 GRIGYWFRSEFQAPSALNRYPREIPPLPWYQKSPCQMFIVGLLSFSTIALELHHLYASLWGYKIFTPPGILFVMFIILLV 444 (539)
Q Consensus 365 ~~~g~~~~~~~~~P~~~n~ipR~IP~~p~y~~~~~~~l~~GilPF~~i~iEl~~i~~s~W~~~~y~~fgfL~~~~iil~i 444 (539)
+++|+| ++++++|+||||||||||+||||+++.+.+++||++||++||+||+||++|+|.+|+||+||||+++++||++
T Consensus 454 ~y~g~k-k~~~e~PvrTNqIpRqIP~q~~y~~~~~~ili~GilPFg~ifIELfFI~~SiW~~qfYY~FGFLFlvfiiLvv 532 (628)
T KOG1278|consen 454 GYFGFK-KPAIEHPVRTNQIPRQIPEQPWYLNPIPSILIAGILPFGAIFIELFFILSSIWLNQFYYMFGFLFLVFIILVV 532 (628)
T ss_pred HHhhcc-CCCCCCCcccCCCcccCCCCccccchhhHHHhhcccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 999995 7788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCcccchhhhcCChhHHHHHHHHHhhhe-eecccccchhhHHHHHHHHHHHHHHHHhhhHHHH
Q 036992 445 LTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYF-RSNMSGFLQLSFFLGYNAAMCYAFFLILGSISFR 523 (539)
Q Consensus 445 ~~a~vsI~~~Y~~L~~Edy~WwW~SF~~~gs~~~y~f~Ysi~y~~-~~~~~g~~~~~~yf~y~~l~s~~~~l~~G~iGfl 523 (539)
+|+|+||++||+|||+||||||||||++||++|+|+|+||++|++ |++++|++++++|||||++++++++++||||||+
T Consensus 533 tcaeisIvl~Yf~LC~Edy~WwWRsF~~sG~~avY~fiYsi~Y~~~kL~i~g~~s~~LYfgYsli~~~~~~l~tGtIGF~ 612 (628)
T KOG1278|consen 533 TCAEISIVLTYFQLCAEDYNWWWRSFLTSGSSAVYVFIYSIFYFFTKLEISGFVSAVLYFGYSLIISLLFFLLTGTIGFL 612 (628)
T ss_pred HHHHHHHHHHHHHHHhcccceeeeeeeccCcchhhHHHHHHhhhheeeeecccchhHHHHHHHHHHHHHHHHHhccHHHH
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCC
Q 036992 524 ASMIFVRRIYRVVKSE 539 (539)
Q Consensus 524 as~~Fv~~IY~~iK~D 539 (539)
||+|||||||+++|+|
T Consensus 613 a~~~Fv~kIYssvKiD 628 (628)
T KOG1278|consen 613 AAFWFVRKIYSSVKID 628 (628)
T ss_pred HHHHHHHHHhhheecC
Confidence 9999999999999998
No 2
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-163 Score=1244.98 Aligned_cols=529 Identities=44% Similarity=0.906 Sum_probs=510.2
Q ss_pred CCcCCCCCCCCCC--CCCCcccCCchhhhcCCcccccceEEEeccccccccccccccCHHHHHHHHHHHHhcceEEEEec
Q 036992 1 ETYQYYDLPFCRP--EPIKWKKETLGEVLNGDRLASALYELKFLEAKTGVTLCSKKLKVDEVAKFRKAVADDFYFQMYYD 78 (539)
Q Consensus 1 E~y~Yy~lpfC~p--~~~~~~~~slGe~L~Gdr~~~S~y~i~f~~~~~c~~lC~~~~t~~~~~~~~~~I~~~Y~~~~~iD 78 (539)
|||.||+||||.+ ++.++++|+|||+|.|||+..|+|+++|++|++.+++|++++++++++.++++|+|+|++||++|
T Consensus 55 ETY~YfsLPfC~g~~~~i~hk~etLGEvL~G~eL~~s~y~ikF~~~v~~~v~C~~~L~~e~v~~f~~AI~~~Yyfqmy~D 134 (593)
T KOG1277|consen 55 ETYRYFSLPFCSGSKESISHKHETLGEVLQGDELEFSGYEIKFRDNVEKEVYCEKKLSEEKVKAFRYAIENDYYFQMYID 134 (593)
T ss_pred hhceeeccceecCCCcccchhhhhHHhhhCCceeeecceeeeecccCCceeeehhhcCHHHHHHHHHHHHhhheeeeeec
Confidence 8999999999984 45679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeecccccCcccccccCCeEEEeeeEEEEEEEeCCeEEEEEEEeCCCCccccCCCCceeEEEEEEEEEeecCccc
Q 036992 79 DLPIWGYIGKIEDGSLVLSEKGNKYYLFTRVQFDALYNGDQVVEIRAFSDPTSVVDITDDIEINVKFTYSIVWSETSAQF 158 (539)
Q Consensus 79 ~LP~~~~~g~~~~~~~~~~~~~~~~~l~NH~~f~I~yn~~~IV~~~v~~~~~~~~~~~~~~~~~i~fTYSV~w~~s~~~w 158 (539)
|||+|+.+|+.++++.+ +++++||+||.+|.|.||+||||+++++.++ +.++.+++ .++|||||+|+|+++++
T Consensus 135 dlPIwGfvGe~d~~k~~---~~~ky~L~thk~f~i~yn~drii~vnlt~~~--~v~L~~~~--~~~~tYsV~W~~t~v~f 207 (593)
T KOG1277|consen 135 DLPIWGFVGEVDEDKLD---NEGKYYLYTHKKFEIGYNGDRIIDVNLTTHG--LVDLRPDK--KLTFTYSVKWKETEVEF 207 (593)
T ss_pred CceeeeEeeeeccccCC---CCCceEEEEeeeEEEeecCceEEEEEeeecc--cccCCCCC--CCceEEEEEeeeccCcH
Confidence 99999999998876322 4579999999999999999999999999854 34555544 68999999999999999
Q ss_pred chhhhhhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhccCCCCc-------chhhccCceEEeccc
Q 036992 159 ETRMDKYSRASSLPTLHKIHWFSFINSIVFILLLMGLLILLILRRLKNDLRKCSSGDE-------EEDKEVGWKYIHGDV 231 (539)
Q Consensus 159 ~~Rwd~y~~~~~~~~~~~ihw~SiiNS~vivl~l~~~v~~Il~r~l~~D~~~y~~~~~-------~~~ee~GWKlvhgDV 231 (539)
++|.|+|++.++++| +||||||+||+++|+||+++|++||+|+||||++||++||| ||+||.|||+|||||
T Consensus 208 ~~rfdkyld~~ff~h--~IHWfSIfNSfmmVifLvGlvamILMRtLrnDyarY~~dee~~d~~d~d~~~E~GWK~vHgDV 285 (593)
T KOG1277|consen 208 EKRFDKYLDPSFFPH--RIHWFSIFNSFMMVIFLVGLVAMILMRTLRNDYARYAKDEEALDDMDRDDQEEYGWKQVHGDV 285 (593)
T ss_pred HHHhHhhcccccccc--eeehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhccccccccccccceeeeccc
Confidence 999999999999987 79999999999999999999999999999999999999776 359999999999999
Q ss_pred CCCCCCccceeeeecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcCCcchhHHHH
Q 036992 232 FRYPQNISLFSAVMGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSSFHNQFSDAGWERSVF 311 (539)
Q Consensus 232 FR~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~~yk~~~g~~W~~~~~ 311 (539)
||||+|+.|||+++|+|.|++..+++++++|++|.+.+. ||+++|+++++|++||.++||+||.+|.+.||++|.|+++
T Consensus 286 FR~p~~~~Lfsa~lGsG~Qlf~l~~~ii~~Alvg~fy~~-rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wik~m~ 364 (593)
T KOG1277|consen 286 FRFPSHPLLFSAVLGSGAQLFTLVLIIIMLALVGVFYTE-RGALLSAAIVVYALTSPINGYVSGSFYARLGGRRWIKNML 364 (593)
T ss_pred ccCCCccHHHHHHhccccchHHHHHHHHHHHHHhhhhcc-chHHHHHHHHHHHhcccccccccceeeehhccHHHHHHHH
Confidence 999999999999999999999999999999999999976 9999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHhCCCCCcChhHHHHHHHHHHHhhhhhhhhhchhccccccCCCCCcccCCCCCCCCCC
Q 036992 312 LAGILYFGPLTVTVLILNTVAVSYGATAALPFGTIMVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREIPPL 391 (539)
Q Consensus 312 lt~~l~P~~~~~~~~~~N~i~~~~~Ss~aipf~ti~~l~~lw~~v~~PL~~lG~~~g~~~~~~~~~P~~~n~ipR~IP~~ 391 (539)
+|+.++|+++++.++++|+++++++|++|+||+|++.++++|++|..||+++|++.|++++.+++.|||++++||+||++
T Consensus 365 lta~Lfp~~~~~t~~~~N~vai~y~at~AlPfgt~v~v~~iw~fv~~PL~~~G~i~GkN~~~~~~~PCR~~~~pR~Ip~~ 444 (593)
T KOG1277|consen 365 LTASLFPVPVFGTAFLLNTVAIAYGATAALPFGTIVVVLLIWLFVISPLTVLGGIAGKNRSGEFDAPCRTKAIPREIPPK 444 (593)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhccccccCccchHHHHHHHHHHhchHHHcccccccccccCCCCCcccccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCccchhhhcchhhHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCcccchhhh
Q 036992 392 PWYQKSPCQMFIVGLLSFSTIALELHHLYASLWGYKIFTPPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVF 471 (539)
Q Consensus 392 p~y~~~~~~~l~~GilPF~~i~iEl~~i~~s~W~~~~y~~fgfL~~~~iil~i~~a~vsI~~~Y~~L~~Edy~WwW~SF~ 471 (539)
|||+++.+.+++||+|||++||+|++|||+|+|.+|+||+|||++++++||+++++||||++|||||++||||||||||+
T Consensus 445 kWy~~~~~~~~~gG~LPFgsIfIEmYfIFtSfW~ykiYyvYgfm~lVf~IL~iVtvcvTIv~TYFlLnaEDyrW~WtSfl 524 (593)
T KOG1277|consen 445 KWYRSPLVIMLMGGFLPFGSIFIEMYFIFTSFWGYKIYYVYGFMFLVFVILLIVTVCVTIVLTYFLLNAEDYRWWWTSFL 524 (593)
T ss_pred cccccchHHHHhhccCccchhhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhccccceeeeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHhhhe-eecccccchhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhccCC
Q 036992 472 RGGSTAIFMFAYSIYFYF-RSNMSGFLQLSFFLGYNAAMCYAFFLILGSISFRASMIFVRRIYRVVKSE 539 (539)
Q Consensus 472 ~~gs~~~y~f~Ysi~y~~-~~~~~g~~~~~~yf~y~~l~s~~~~l~~G~iGflas~~Fv~~IY~~iK~D 539 (539)
++||+|+|+++||+|||+ |++|+|++|+.+|||||+++|.++|+|||+|||.++..||||||+++|+|
T Consensus 525 s~~ST~~yvy~Ys~yYy~~ktkMsG~fQTsfyFGYm~~f~~~lgim~Gtigy~gt~~FVR~IY~nvK~d 593 (593)
T KOG1277|consen 525 SAGSTALYVYLYSFYYYFFKTKMSGLFQTSFYFGYMAVFCYALGLMCGTIGYVGTLLFVRKIYRNVKID 593 (593)
T ss_pred ccccceeehhhhHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHhhHhhhHHHHHHHHHHhhccCC
Confidence 999999999999999999 99999999999999999999999999999999999999999999999998
No 3
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=100.00 E-value=3.9e-148 Score=1214.01 Aligned_cols=492 Identities=42% Similarity=0.843 Sum_probs=463.1
Q ss_pred CcCCCCCCCCCCCC-CCcccCCchhhhcCCcccccceEEEeccccccccccccccCHHHHHHHHHHHHhcceEEEEecCc
Q 036992 2 TYQYYDLPFCRPEP-IKWKKETLGEVLNGDRLASALYELKFLEAKTGVTLCSKKLKVDEVAKFRKAVADDFYFQMYYDDL 80 (539)
Q Consensus 2 ~y~Yy~lpfC~p~~-~~~~~~slGe~L~Gdr~~~S~y~i~f~~~~~c~~lC~~~~t~~~~~~~~~~I~~~Y~~~~~iD~L 80 (539)
|||||+||||+|++ .++++|||||+|+|||+++|||+++|++|++|+.+|+++++++|+++++++|+|+|++||+||||
T Consensus 2 ~Y~Yy~lPfC~P~~~~~~~~~slGevL~Gdr~~~S~y~i~f~~~~~c~~lC~~~l~~~~~~~l~~~I~~~Y~~~~~vD~L 81 (521)
T PF02990_consen 2 PYDYYDLPFCRPEEGIEHKSESLGEVLRGDRIQNSPYEIKFLQNVTCKVLCKKTLTKEDVKKLKEAIENNYRVEMYVDDL 81 (521)
T ss_pred CccccCCCCcCCCCccccccCCHHHHhccCceecCceEEEEecCcchhhccCccCCHHHHHHHHHHHHHhheeeEEecCc
Confidence 89999999999987 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeccccc------Ccccccc-cCCeEEEeeeEEEEEEEe----CC-eEEEEEEEeCCC----------CccccCCC
Q 036992 81 PIWGYIGKIED------GSLVLSE-KGNKYYLFTRVQFDALYN----GD-QVVEIRAFSDPT----------SVVDITDD 138 (539)
Q Consensus 81 P~~~~~g~~~~------~~~~~~~-~~~~~~l~NH~~f~I~yn----~~-~IV~~~v~~~~~----------~~~~~~~~ 138 (539)
|+++.+|+.++ .|.++|. +++++|||||++|+|+|| ++ |||||||+|.+. ++.+++++
T Consensus 82 P~~~~~~~~~~~~~~y~~G~~~g~~~~~~~~l~NH~~f~I~Yn~~~~~~~~IVgf~v~p~Si~~~~C~~~~~~~~~l~~~ 161 (521)
T PF02990_consen 82 PIAGFIGSVDGCDKGYPIGFPLGFKDDNKYYLYNHLDFTIRYNQESNGDYRIVGFEVTPRSIDHSTCPGNESSPQELPED 161 (521)
T ss_pred eEEEEecccCCcceecCCCcccCcccCCcceeEeEEEEEEEEECCCCCceEEEEEEEEeccccCccccccCCCCeeccCC
Confidence 99999888764 3455554 467899999999999999 34 999999999542 23344444
Q ss_pred Cce-eEEEEEEEEEeecCcccchhhhhhcccCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhccCCCCc-
Q 036992 139 IEI-NVKFTYSIVWSETSAQFETRMDKYSRASSLPTLHKIHWFSFINSIVFILLLMGLLILLILRRLKNDLRKCSSGDE- 216 (539)
Q Consensus 139 ~~~-~i~fTYSV~w~~s~~~w~~Rwd~y~~~~~~~~~~~ihw~SiiNS~vivl~l~~~v~~Il~r~l~~D~~~y~~~~~- 216 (539)
++. +|+|||||+|++++++|++|||+|+++ .+++++||+||+||+++|++|+++|++|++|++|||++|||++|+
T Consensus 162 ~~~~~i~fTYSV~w~~s~~~w~~Rwd~Yl~~---~~~~~ihw~SiiNS~iivl~L~~~v~~Il~R~l~~D~~~y~~~~~~ 238 (521)
T PF02990_consen 162 KEADNITFTYSVKWEESDVPWASRWDKYLDS---MFDSQIHWFSIINSFIIVLFLSGLVAIILLRTLRRDISRYNDEDSE 238 (521)
T ss_pred CcccEEEEEEEEEEEecCCchhhcccccccc---ccCCceEEEeHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence 433 799999999999999999999999985 236699999999999999999999999999999999999999654
Q ss_pred -chhhccCceEEecccCCCCCCccceeeeecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhh
Q 036992 217 -EEDKEVGWKYIHGDVFRYPQNISLFSAVMGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITS 295 (539)
Q Consensus 217 -~~~ee~GWKlvhgDVFR~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~ 295 (539)
|++||+|||+|||||||||+|+++||+++|+|+|+++|+++++++|++|+++|++||+++++++++|+++|++|||+||
T Consensus 239 ~~~~ee~GWKlvhgDVFR~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~ 318 (521)
T PF02990_consen 239 EDDQEESGWKLVHGDVFRPPKHPMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSA 318 (521)
T ss_pred cccccccchhhhhHHHhcCcCCchHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHH
Confidence 4599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcchhHHHHHHhhhhhHHHHHHHHHHHHHHHHhCCCCCcChhHHHHHHHHHHHhhhhhhhhhchhccccccCC
Q 036992 296 SFHNQFSDAGWERSVFLAGILYFGPLTVTVLILNTVAVSYGATAALPFGTIMVIVFIYMLFAVPLLALGGRIGYWFRSEF 375 (539)
Q Consensus 296 ~~yk~~~g~~W~~~~~lt~~l~P~~~~~~~~~~N~i~~~~~Ss~aipf~ti~~l~~lw~~v~~PL~~lG~~~g~~~~~~~ 375 (539)
|+||+++|++||+++++|++++|++++++++++|+++|.++||+|+||+|++.++++|++|++||+++||++|+| +++.
T Consensus 319 ~~yk~~~g~~W~~~~~lt~~~~P~~~~~~~~~~n~i~~~~~ss~aipf~t~~~l~~lw~~v~~PL~~lG~~~g~k-~~~~ 397 (521)
T PF02990_consen 319 RLYKSFGGKKWKKNSILTSLLFPGILFSIFFILNFIAWSYGSSSAIPFGTILFLIALWFFVSIPLTFLGGYFGFK-NPPI 397 (521)
T ss_pred HHHHHcCCCceeehhhHHHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhhhhhhcchhhhcC-cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 4455
Q ss_pred -CCCcccCCCCCCCCCCCCccCccchhhhcchhhHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHhh
Q 036992 376 -QAPSALNRYPREIPPLPWYQKSPCQMFIVGLLSFSTIALELHHLYASLWGYKIFTPPGILFVMFIILLVLTAILSIGLT 454 (539)
Q Consensus 376 -~~P~~~n~ipR~IP~~p~y~~~~~~~l~~GilPF~~i~iEl~~i~~s~W~~~~y~~fgfL~~~~iil~i~~a~vsI~~~ 454 (539)
++|||+|+|||+||+||||+++++.++++|++||++|++|++||++|+|.+|+||+||||++++++++++|||+||++|
T Consensus 398 ~~~p~~~n~ipR~IP~~~~y~~~~~~~l~~G~lPF~~i~iEl~~i~~s~W~~~~y~~fgfl~~~~~ll~i~~a~vsI~~t 477 (521)
T PF02990_consen 398 DEFPCRTNQIPRQIPPQPWYLSPFFSILIGGILPFGAIFIELYFIFSSLWSNKFYYLFGFLLLVFILLIITCAEVSIILT 477 (521)
T ss_pred ccCCcCCCCCCCcCCCCccccCCccceeecchHHHHHHHHHHHHHHHHhhcCcceEEehHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcccchhhhcCChhHHHHHHHHHhhhe-eecccccc
Q 036992 455 YIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYF-RSNMSGFL 497 (539)
Q Consensus 455 Y~~L~~Edy~WwW~SF~~~gs~~~y~f~Ysi~y~~-~~~~~g~~ 497 (539)
|+|||+||||||||||++|||+|+|+|+||+||++ |++|+|++
T Consensus 478 Y~~L~~Edy~WwWrSF~~~~s~~~y~f~Ysi~y~~~~~~~~g~~ 521 (521)
T PF02990_consen 478 YFQLCAEDYRWWWRSFLTGGSSGIYVFLYSIYYYFTKLSMSGFV 521 (521)
T ss_pred HHHHhccccceeeeeehhCcHHHHHHHHHHHHhhheeEEeeecC
Confidence 99999999999999999999999999999999999 99999974
No 4
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=81.86 E-value=15 Score=36.85 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=19.8
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHhCCCCCcChhHHHHHHHHHHHh
Q 036992 313 AGILYFGPLTVTVLILNTVAVSYGATAALPFGTIMVIVFIYMLF 356 (539)
Q Consensus 313 t~~l~P~~~~~~~~~~N~i~~~~~Ss~aipf~ti~~l~~lw~~v 356 (539)
+..++|+...++.+.. .. ++..+...++.+.++|+-+
T Consensus 200 n~~ll~~~~~~l~i~s----~~---t~~~q~la~lvl~~I~iyi 236 (248)
T PF11368_consen 200 NQYLLPILYILLFIYS----LL---TGENQLLAILVLIIIWIYI 236 (248)
T ss_pred HHHHHHHHHHHHHHHH----HH---cCCccHHHHHHHHHHHHHH
Confidence 4456677655443332 12 2344555567777777644
No 5
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=78.55 E-value=6 Score=35.09 Aligned_cols=80 Identities=23% Similarity=0.461 Sum_probs=55.7
Q ss_pred eeecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcCCcchhHHHHHHhhhhhHHHH
Q 036992 243 AVMGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSSFHNQFSDAGWERSVFLAGILYFGPLT 322 (539)
Q Consensus 243 ~lvG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~~yk~~~g~~W~~~~~lt~~l~P~~~~ 322 (539)
++-|.-.-+.++.+..+++|.+=...+-+.+.+--.....++++.+++|++++|.- +.|.|..= ..++.++-.+++
T Consensus 7 vl~g~~~~~~~tl~~~l~~a~ll~~~~~~e~~~~~~~~~i~~ls~~~GG~~a~~~~---~~kG~l~G-~~~Gl~y~~il~ 82 (116)
T PF12670_consen 7 VLKGLLVAYIITLILLLLLALLLYFTSLSESILPWLVVIIYILSVFIGGFYAGRKA---GSKGWLHG-LLVGLLYFLILL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccchHHHH-HHHHHHHHHHHH
Confidence 34455556666666677777665555567778888889999999999999999764 46778754 447766665555
Q ss_pred HHHH
Q 036992 323 VTVL 326 (539)
Q Consensus 323 ~~~~ 326 (539)
++-+
T Consensus 83 lis~ 86 (116)
T PF12670_consen 83 LISF 86 (116)
T ss_pred HHHH
Confidence 4433
No 6
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=74.29 E-value=1.1e+02 Score=34.96 Aligned_cols=63 Identities=21% Similarity=0.346 Sum_probs=34.1
Q ss_pred ecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcCCcchhHHHHHHhhh
Q 036992 245 MGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSSFHNQFSDAGWERSVFLAGIL 316 (539)
Q Consensus 245 vG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~~yk~~~g~~W~~~~~lt~~l 316 (539)
+|.|.|.+.... .+ ...+...|+--....-+.++....++|.++.++.. ...|+++..+...+
T Consensus 143 vgaG~~~~~~~~----is--El~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~---~~~WRw~~~~~~i~ 205 (599)
T PF06609_consen 143 VGAGVQELAALA----IS--ELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA---HSGWRWIFYIFIIW 205 (599)
T ss_pred HhhHHHHHHHHH----HH--HhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc---CCCcchHHHHHHHH
Confidence 366777643211 11 22333455543433444455566677777776644 35798887766554
No 7
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=72.41 E-value=1.7e+02 Score=32.80 Aligned_cols=121 Identities=15% Similarity=0.331 Sum_probs=72.9
Q ss_pred hhhcchhhHHHHHHHHHHHHHh-hcccc--cccchhHHHHHHHHHHHHHHHHHHHhhhhcccC----C------------
Q 036992 401 MFIVGLLSFSTIALELHHLYAS-LWGYK--IFTPPGILFVMFIILLVLTAILSIGLTYIQLSV----E------------ 461 (539)
Q Consensus 401 ~l~~GilPF~~i~iEl~~i~~s-~W~~~--~y~~fgfL~~~~iil~i~~a~vsI~~~Y~~L~~----E------------ 461 (539)
++.+.++|..... .+++++. .|.++ --..|+-++..+.+.++++.-.+++..|+-... |
T Consensus 334 ~lt~~~~P~~~~~--~~~~~n~i~~~~~ss~aipf~t~~~l~~lw~~v~~PL~~lG~~~g~k~~~~~~~p~~~n~ipR~I 411 (521)
T PF02990_consen 334 ILTSLLFPGILFS--IFFILNFIAWSYGSSSAIPFGTILFLIALWFFVSIPLTFLGGYFGFKNPPIDEFPCRTNQIPRQI 411 (521)
T ss_pred hHHHHHHHHHHHH--HHHHHHHHHHhhccccccchHHHHHHHHHHHHHhhhhhhcchhhhcCccccccCCcCCCCCCCcC
Confidence 3445577764433 2334444 46443 335688888888889999999999888865322 2
Q ss_pred -CCcccchhh---hcCC---hhHHHHHHHHHhhhe-eecccccchhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 036992 462 -DHEWWWRSV---FRGG---STAIFMFAYSIYFYF-RSNMSGFLQLSFFLGYNAAMCYAFFLILGSISFRASMIFV 529 (539)
Q Consensus 462 -dy~WwW~SF---~~~g---s~~~y~f~Ysi~y~~-~~~~~g~~~~~~yf~y~~l~s~~~~l~~G~iGflas~~Fv 529 (539)
...|.=+.+ +.+| ..++|+.+|.++--. .-+ ....||+.++..+++.+.|+.++-+.++.-.
T Consensus 412 P~~~~y~~~~~~~l~~G~lPF~~i~iEl~~i~~s~W~~~------~y~~fgfl~~~~~ll~i~~a~vsI~~tY~~L 481 (521)
T PF02990_consen 412 PPQPWYLSPFFSILIGGILPFGAIFIELYFIFSSLWSNK------FYYLFGFLLLVFILLIITCAEVSIILTYFQL 481 (521)
T ss_pred CCCccccCCccceeecchHHHHHHHHHHHHHHHHhhcCc------ceEEehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 124533333 4555 346688887665543 222 1233566666666677777777777776543
No 8
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=72.15 E-value=48 Score=32.29 Aligned_cols=121 Identities=16% Similarity=0.322 Sum_probs=54.8
Q ss_pred ccchhhhcchhhHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHhhhhcc--cCCCCcccchhhhcCC
Q 036992 397 SPCQMFIVGLLSFSTIALELHHLYASLWGYKIFTPPGILFVMFIILLVLTAILSIGLTYIQL--SVEDHEWWWRSVFRGG 474 (539)
Q Consensus 397 ~~~~~l~~GilPF~~i~iEl~~i~~s~W~~~~y~~fgfL~~~~iil~i~~a~vsI~~~Y~~L--~~Edy~WwW~SF~~~g 474 (539)
++..+.+-+.+-|.+++.=+.-++. ....+--..+|++.+...- ++.......+.-|++- +.+..++||+.+..+.
T Consensus 77 ~~~~~~ld~~L~~~~if~~~~gi~~-~f~~~~~~~~gi~tli~~~-i~~G~~~~~~~~~i~~~~~~~~r~~~~k~~~~~~ 154 (206)
T PF06570_consen 77 NPWLMALDNSLLFFGIFSLLFGIMG-FFSPKNSNQYGIITLILVS-IVGGLVFYFIFKYIYPYKKKKKRPSWWKYILISV 154 (206)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccccHHHHHHHH-HHHHHHHHHHHHHHhcccccccccHHHHHHHHHH
Confidence 4455556666666666655554443 2222111111665432221 1111112222223343 3456678999986443
Q ss_pred -hhHHHHHHHHHhhheeecccccchhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 036992 475 -STAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNAAMCYAFFLILGSISFRASMIFVRR 531 (539)
Q Consensus 475 -s~~~y~f~Ysi~y~~~~~~~g~~~~~~yf~y~~l~s~~~~l~~G~iGflas~~Fv~~ 531 (539)
+..+++.++.+-.++-..++-.++ -...++.|.+.+.+.+++=||
T Consensus 155 ~~~~~w~~~~~~~~~lp~~inp~l~------------~~~~iiig~i~~~~~~~lkkk 200 (206)
T PF06570_consen 155 LAMVLWIVIFVLTSFLPPVINPVLP------------PWVYIIIGVIAFALRFYLKKK 200 (206)
T ss_pred HHHHHHHHHHHHHHHccccCCcCCC------------HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555544444111221122 223345666666666554443
No 9
>PRK11339 abgT putative aminobenzoyl-glutamate transporter; Provisional
Probab=66.53 E-value=28 Score=38.77 Aligned_cols=51 Identities=18% Similarity=0.259 Sum_probs=27.9
Q ss_pred ccchHHHHHHHHHHHHH--hhccCcCCCc-----hHHH----HHHHHHHHhhhhhhhhhhhh
Q 036992 247 VGNQLLTIVCILFVLAF--LGILYPYNRG-----LLST----SLVLLYSLTSVVAGYITSSF 297 (539)
Q Consensus 247 ~G~Qll~~~~~~~~~a~--~g~~~~~~~g-----~l~t----~~i~~y~~~~~i~Gy~s~~~ 297 (539)
+|+-++......+++.. -|.++..+.| -+++ ...++|.+.|.+-|+.+++.
T Consensus 265 Ag~~~l~~~~~i~~l~lP~~g~Lr~~~tG~l~~Sp~~~siv~~i~~~Fli~GivyG~~~g~i 326 (508)
T PRK11339 265 AGVVSLLFIAAIALMVIPENGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTI 326 (508)
T ss_pred HHHHHHHHHHHHHHHHccCCcccccCCCCCccCChHHHhHHHHHHHHHHHHHHHHhhhcccc
Confidence 45555554444333321 4445422224 5566 66667777777777777754
No 10
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=64.05 E-value=40 Score=30.24 Aligned_cols=23 Identities=9% Similarity=0.384 Sum_probs=14.8
Q ss_pred CCcchhHHHHHHhhhhhHHHHHHH
Q 036992 302 SDAGWERSVFLAGILYFGPLTVTV 325 (539)
Q Consensus 302 ~g~~W~~~~~lt~~l~P~~~~~~~ 325 (539)
+.|+|++..+ .+.++|..+..++
T Consensus 110 g~r~~~~~~~-~s~~~~~~i~~~F 132 (141)
T PF07331_consen 110 GERRWLRLLL-ISVVFAAVIYFVF 132 (141)
T ss_pred CCCcHHHHHH-HHHHHHHHHHHHH
Confidence 3678887554 6666777765544
No 11
>PF13347 MFS_2: MFS/sugar transport protein
Probab=53.28 E-value=83 Score=33.52 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=46.5
Q ss_pred hhccCceEEecccCCCCCCccceeeee--cccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhh
Q 036992 219 DKEVGWKYIHGDVFRYPQNISLFSAVM--GVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSS 296 (539)
Q Consensus 219 ~ee~GWKlvhgDVFR~P~~~~lls~lv--G~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~ 296 (539)
++..++|..-..+||.|+...++.+.. ..|..+..... .+-.-..+ +.+...+.....+.+.++++....++
T Consensus 209 ~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~---~y~~~~vl---~~~~~~~~~~~~~~~~~~v~~~~~~~ 282 (428)
T PF13347_consen 209 EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFL---PYYFTYVL---GNEGLISIFMLIFFVASIVGSPLWGR 282 (428)
T ss_pred ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHH---HHHHHHHh---cCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 455566666678888877665543322 22222222211 11111122 22255666666778888888888899
Q ss_pred hhhhcCCcc
Q 036992 297 FHNQFSDAG 305 (539)
Q Consensus 297 ~yk~~~g~~ 305 (539)
+-|+++.++
T Consensus 283 l~~r~gk~~ 291 (428)
T PF13347_consen 283 LSKRFGKKK 291 (428)
T ss_pred HHHHcccee
Confidence 999997665
No 12
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=49.54 E-value=97 Score=30.12 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=25.7
Q ss_pred HHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcC
Q 036992 255 VCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSSFHNQFS 302 (539)
Q Consensus 255 ~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~~yk~~~ 302 (539)
.+.+++.+.++++++.++... .+..-++.++++|.+-..+++.+.
T Consensus 91 ~if~~~~gi~~~f~~~~~~~~---gi~tli~~~i~~G~~~~~~~~~i~ 135 (206)
T PF06570_consen 91 GIFSLLFGIMGFFSPKNSNQY---GIITLILVSIVGGLVFYFIFKYIY 135 (206)
T ss_pred HHHHHHHHHHHHHhhcccccc---cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566777887776332221 333334556777777766666543
No 13
>TIGR02973 nitrate_rd_NapE periplasmic nitrate reductase, NapE protein. NapE, homologous to TorE (TIGR02972), is a membrane protein of unknown function that is part of the periplasmic nitrate reductase system; it may be part of the enzyme complex. The periplasmic nitrate reductase allows for nitrate respiration in anaerobic conditions.
Probab=48.08 E-value=29 Score=25.28 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=29.3
Q ss_pred CcchhHHHHHHhhhhhHHHHHHHHHHHHHHHHhC
Q 036992 303 DAGWERSVFLAGILYFGPLTVTVLILNTVAVSYG 336 (539)
Q Consensus 303 g~~W~~~~~lt~~l~P~~~~~~~~~~N~i~~~~~ 336 (539)
+++|+...+++..++|.+.......--++.|..+
T Consensus 2 ~~El~~flfl~~~l~PiLsV~~V~~YGF~vWm~Q 35 (42)
T TIGR02973 2 RMELNTFLFLAAVIWPVLSVITVGGYGFAVWMYQ 35 (42)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678988999999999999888888888888765
No 14
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=46.52 E-value=26 Score=27.17 Aligned_cols=35 Identities=17% Similarity=0.060 Sum_probs=29.4
Q ss_pred CCcchhHHHHHHhhhhhHHHHHHHHHHHHHHHHhC
Q 036992 302 SDAGWERSVFLAGILYFGPLTVTVLILNTVAVSYG 336 (539)
Q Consensus 302 ~g~~W~~~~~lt~~l~P~~~~~~~~~~N~i~~~~~ 336 (539)
++++|+...+++..++|.+..++...--++.|..+
T Consensus 14 k~~E~~~flfl~~~l~PiL~v~~Vg~YGF~VWm~Q 48 (56)
T PF06796_consen 14 KRSELKAFLFLAVVLFPILAVAFVGGYGFIVWMYQ 48 (56)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34579988999999999999888888888888765
No 15
>PF08055 Trp_leader1: Tryptophan leader peptide; InterPro: IPR012638 This family consists of the tryptophan (trp) leader peptides. Tryptophan accumulation is the principal event resulting in down regulation of transcription of the structural genes of the trp operon. The leader peptide of the trp operon forms mutually exclusive secondary structures that would either result in the termination of transcription of the trp operon when tryptophan is in plentiful supply or vice versa [].
Probab=44.41 E-value=7.3 Score=22.57 Aligned_cols=9 Identities=33% Similarity=1.609 Sum_probs=6.4
Q ss_pred CCCcccchh
Q 036992 461 EDHEWWWRS 469 (539)
Q Consensus 461 Edy~WwW~S 469 (539)
+-.||||.+
T Consensus 5 ~~~nwwwta 13 (18)
T PF08055_consen 5 QIQNWWWTA 13 (18)
T ss_pred cccceeeec
Confidence 345799975
No 16
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=41.78 E-value=21 Score=39.66 Aligned_cols=163 Identities=19% Similarity=0.272 Sum_probs=89.2
Q ss_pred CCCCccceeeeecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHH--HHHHhhhhhhhhhhhhhhhc--CCcchhHH
Q 036992 234 YPQNISLFSAVMGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVL--LYSLTSVVAGYITSSFHNQF--SDAGWERS 309 (539)
Q Consensus 234 ~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~--~y~~~~~i~Gy~s~~~yk~~--~g~~W~~~ 309 (539)
.|.-.+.++.+++++=+-+.-++++++.--.|.++|.=+|.++..+.+ +|.+.+.+.|-+.. +..- ....|+..
T Consensus 265 ~~~~~~~~a~i~sa~K~Tlsr~LlLIVSlGYGIVkP~Lg~~l~rv~~ig~~~~i~s~i~~l~~~--~g~~se~~~~~~lf 342 (518)
T KOG2568|consen 265 SPKVYTVFASILSAIKKTLSRLLLLIVSLGYGIVKPTLGGTLLRVCQIGVIYFIASEILGLARV--IGNISELSSLLILF 342 (518)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhcCcceEecCcchHHHHHHHHhHHHHHHHHHHHHHHH--hcCcccccchhhHH
Confidence 688889999999999888888787777777899999766666554432 23333333333221 1111 11112111
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhCCCCCcChhHHHHHHHHHHHhhhhhhhhhchhccccccCCCCCcccCCCCCCCC
Q 036992 310 VFLAGILYFGPLTVTVLILNTVAVSYGATAALPFGTIMVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREIP 389 (539)
Q Consensus 310 ~~lt~~l~P~~~~~~~~~~N~i~~~~~Ss~aipf~ti~~l~~lw~~v~~PL~~lG~~~g~~~~~~~~~P~~~n~ipR~IP 389 (539)
. ++|+.-....+..|++.|++=|+-= =++.|++-
T Consensus 343 ~-----------------------------~ip~ai~d~~f~~wIF~SL~~Tlk~-----------------Lr~rRn~v 376 (518)
T KOG2568|consen 343 A-----------------------------ALPLAILDAAFIYWIFISLAKTLKK-----------------LRLRRNIV 376 (518)
T ss_pred H-----------------------------HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHH
Confidence 1 2233333456778888888655431 12235554
Q ss_pred CCCCccCccchhhhcc-hhhHHHHHHHHHHHH----HhhcccccccchhHHHHHHHHHHHH
Q 036992 390 PLPWYQKSPCQMFIVG-LLSFSTIALELHHLY----ASLWGYKIFTPPGILFVMFIILLVL 445 (539)
Q Consensus 390 ~~p~y~~~~~~~l~~G-ilPF~~i~iEl~~i~----~s~W~~~~y~~fgfL~~~~iil~i~ 445 (539)
+-.-|++- -.+++.| +.-|+-+.+|.++.- +..|+.+.+.-.+--++.+++|+++
T Consensus 377 Kl~lYr~F-~n~l~~~Vvas~~~i~~~~~~~~~~~~~~~Wk~~Wv~~a~W~~l~~~iLvvI 436 (518)
T KOG2568|consen 377 KLSLYRKF-TNTLAFSVVASFAFILVETIFYSIMSCNKDWKERWVDTAFWPLLFFLILVVI 436 (518)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhhhccHHHHHHHHHHHH
Confidence 44456543 3334333 445566677877654 6678776443222223444444444
No 17
>TIGR02972 TMAO_torE trimethylamine N-oxide reductase system, TorE protein. Members of this small, apparent transmembrane protein are designated TorE and occur in operons for the trimethylamine N-oxide (TMAO) reductase system. Members are closely related to the NapE protein of the related periplasmic nitrate reductase system. It may be that TorE is an integral membrane subunit of a complex with the reductase TorA.
Probab=40.56 E-value=35 Score=25.51 Aligned_cols=34 Identities=6% Similarity=-0.124 Sum_probs=29.0
Q ss_pred CcchhHHHHHHhhhhhHHHHHHHHHHHHHHHHhC
Q 036992 303 DAGWERSVFLAGILYFGPLTVTVLILNTVAVSYG 336 (539)
Q Consensus 303 g~~W~~~~~lt~~l~P~~~~~~~~~~N~i~~~~~ 336 (539)
+++|+...+++..++|.+..+....--++.|..+
T Consensus 7 ~~El~~flfl~v~l~PiLsV~~Vg~YGF~vWm~Q 40 (47)
T TIGR02972 7 SNELKALGFIIVVLFPILSVAGIGGYGFIIWMIQ 40 (47)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999888888888888765
No 18
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=38.86 E-value=10 Score=38.81 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHhhhhh--hhhhhhhhhhcCCcchhHHHHHHhhhhhHH
Q 036992 273 GLLSTSLVLLYSLTSVVA--GYITSSFHNQFSDAGWERSVFLAGILYFGP 320 (539)
Q Consensus 273 g~l~t~~i~~y~~~~~i~--Gy~s~~~yk~~~g~~W~~~~~lt~~l~P~~ 320 (539)
|..+-+.+++++++-..+ =+.=..+.+..+..-|...++.-++++-.+
T Consensus 102 GQ~LF~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs~WtiLaFcLAF~Laiv 151 (381)
T PF05297_consen 102 GQTLFVGIVILFLCCLLALGVWFYMWLLRELGASFWTILAFCLAFLLAIV 151 (381)
T ss_dssp --------------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 444444455555444443 222233445677777876555444443333
No 19
>PF03806 ABG_transport: AbgT putative transporter family; InterPro: IPR004697 The p-aminobenzoyl-glutamate transporter family includes two putative transporters, the AbgT protein of Escherichia coli and MtrF of Neisseria gonorrhoeae. AbgT expression is apparently cryptic in wild type cells, but when present on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs []. p-Aminobenzoate is a constituent of, and a precursor for, the biosynthesis of folic acid. It is not currently known if AbgT is naturally involved in transporting p-aminobenzoyl-glutamate, or if it only becomes involved when under altered regulation. MtrF is an inner membrane protein which, together with the MtrCDE efflux pump, is required for high-level resistance to hydrophobic antimicrobial agents in N. gonorrhoeae []. Its role in this process is not known, but it has been suggested that it may be a component of the efflux pump which is dispensible for basal activity, but required for high-level activity [].
Probab=35.65 E-value=2.5e+02 Score=31.44 Aligned_cols=150 Identities=12% Similarity=0.111 Sum_probs=64.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhccCCCCc-chhhccCceEEecccCCCCC-CccceeeeecccchHH
Q 036992 175 HKIHWFSFINSIVFILLLMGLLILLILRRLKNDLRKCSSGDE-EEDKEVGWKYIHGDVFRYPQ-NISLFSAVMGVGNQLL 252 (539)
Q Consensus 175 ~~ihw~SiiNS~vivl~l~~~v~~Il~r~l~~D~~~y~~~~~-~~~ee~GWKlvhgDVFR~P~-~~~lls~lvG~G~Qll 252 (539)
+-..|+-.+-|. ++++.+...+--|.+..-+.+|+.+++ ++.||..=++ +|+ +..+ --+|+-++
T Consensus 200 p~~N~yF~~aSt---~~l~~v~~~vt~kivePrl~~~~~~~~~~~~~~~~~~L-------t~~EkkgL----r~Agi~~l 265 (502)
T PF03806_consen 200 PLMNYYFMIAST---FVLTIVGTWVTEKIVEPRLGKYDGDADDDEIEEASSSL-------TPREKKGL----RWAGIALL 265 (502)
T ss_pred hHHHHHHHHHHH---HHHHHHHHHHhhhhhccccccccccccccccccccccC-------CHHHHHHH----HHHHHHHH
Confidence 355666555443 334445555556777766777765432 1111110011 121 1111 11455555
Q ss_pred HHHHHHHHHHHh--hccCcCCC-----chHHHHHHHHHHHhhhhhhhhhhhhhhhcCC-cchhHHHHHHhhhhhHHHHHH
Q 036992 253 TIVCILFVLAFL--GILYPYNR-----GLLSTSLVLLYSLTSVVAGYITSSFHNQFSD-AGWERSVFLAGILYFGPLTVT 324 (539)
Q Consensus 253 ~~~~~~~~~a~~--g~~~~~~~-----g~l~t~~i~~y~~~~~i~Gy~s~~~yk~~~g-~~W~~~~~lt~~l~P~~~~~~ 324 (539)
..+.+.++.+.= +.+..... +.+++..+.+-.+.-.+.|.+=|+.-++++. ++..+.+.-..--....+...
T Consensus 266 ~~lall~ll~iP~~a~LR~~~tG~l~~SPf~~gIIpiI~l~F~i~GivYG~~sG~iks~~Dv~~~M~~~m~~m~~yiVL~ 345 (502)
T PF03806_consen 266 AFLALLLLLLIPENAPLRSPETGSLFPSPFMKGIIPIIFLFFLIPGIVYGIASGTIKSDKDVVKMMSKGMKSMAPYIVLA 345 (502)
T ss_pred HHHHHHHHHHccCCccccCCCCCcccCChHHHhHHHHHHHHHHHHHHHHhhhhceecCHHHHHHHHHHHHHHhHHHHHHH
Confidence 444333222221 23332122 3345544444444444444444444334433 333333322222334445555
Q ss_pred HHHHHHHHHHhCCC
Q 036992 325 VLILNTVAVSYGAT 338 (539)
Q Consensus 325 ~~~~N~i~~~~~Ss 338 (539)
++..+++++.+.|.
T Consensus 346 F~aaQFia~F~~Sn 359 (502)
T PF03806_consen 346 FFAAQFIAYFNWSN 359 (502)
T ss_pred HHHHHHHHHHhhcc
Confidence 66777777766654
No 20
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=32.12 E-value=1.4e+02 Score=30.10 Aligned_cols=71 Identities=24% Similarity=0.403 Sum_probs=47.3
Q ss_pred ecccchHHHHHHHHHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhhh-------------------hhhcCCcc
Q 036992 245 MGVGNQLLTIVCILFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSSF-------------------HNQFSDAG 305 (539)
Q Consensus 245 vG~G~Qll~~~~~~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~~-------------------yk~~~g~~ 305 (539)
||++.-++...++.++|-.+|++ +.|+++--.||-.+++. +..++|.+
T Consensus 157 vGnd~~F~~af~vAflFnwIGFl-------------ltycl~tT~agRYGA~~GfGLsLikwilIv~~sd~f~~y~n~q~ 223 (262)
T KOG4812|consen 157 VGNDGIFMWAFIVAFLFNWIGFL-------------LTYCLTTTHAGRYGAISGFGLSLIKWILIVRFSDDFESYFNGQY 223 (262)
T ss_pred cccchHHHHHHHHHHHHHHHHHH-------------HHHHHHhhHhhhhhhhhccchhhheeeEEeecccccccccccch
Confidence 79999888888888888877764 56777666666555532 23477788
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHH
Q 036992 306 WERSVFLAGILYFGPLTVTVLILNTVA 332 (539)
Q Consensus 306 W~~~~~lt~~l~P~~~~~~~~~~N~i~ 332 (539)
|.+..+ ++-|+++.+-.++|.+-
T Consensus 224 wLwwi~----~vlG~ll~lr~~i~Yik 246 (262)
T KOG4812|consen 224 WLWWIF----LVLGLLLFLRGFINYIK 246 (262)
T ss_pred HHHHHH----HHHHHHHHHHHHHhHHH
Confidence 887555 34455555555666554
No 21
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=29.36 E-value=3.2e+02 Score=30.91 Aligned_cols=49 Identities=22% Similarity=0.325 Sum_probs=27.8
Q ss_pred hhhhHHHHHHHHH-HHHHHHHHHHHHHHhhchhhccCCCCc---chhhccCce
Q 036992 177 IHWFSFINSIVFI-LLLMGLLILLILRRLKNDLRKCSSGDE---EEDKEVGWK 225 (539)
Q Consensus 177 ihw~SiiNS~viv-l~l~~~v~~Il~r~l~~D~~~y~~~~~---~~~ee~GWK 225 (539)
.+|++.+|++-+. -++..++.+|.+-..+++...+|+++- +.+.++|||
T Consensus 196 ~r~l~~I~~~~~~~~ll~~~i~~I~lla~~~~k~gFns~~~iF~~f~N~sgw~ 248 (550)
T KOG1289|consen 196 TRVLARINSVSVYLNLLFLVILMITLLAASSKKTGFNSGSFIFGKFNNYSGWK 248 (550)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCceeeecccccCCCC
Confidence 4788888886444 444555556665555555322343221 345678888
No 22
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=29.25 E-value=2.6e+02 Score=29.21 Aligned_cols=29 Identities=7% Similarity=0.174 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcCCcchh
Q 036992 277 TSLVLLYSLTSVVAGYITSSFHNQFSDAGWE 307 (539)
Q Consensus 277 t~~i~~y~~~~~i~Gy~s~~~yk~~~g~~W~ 307 (539)
-.-++.++++|.++ +.+..|-+-+.-+|.
T Consensus 149 LGEi~~~vffG~l~--v~g~~yiqt~~~~~~ 177 (303)
T COG1575 149 LGEIFVGVFFGPLI--VLGAYYIQTGRLSWA 177 (303)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHhcccchHH
Confidence 34566777778776 677778775555554
No 23
>PF12271 Chs3p: Chitin synthase III catalytic subunit; InterPro: IPR022057 This family of proteins is found in eukaryotes. Proteins in this family are typically between 288 and 332 amino acids in length. This family is the catalytic domain of chitin synthase III. Chitin is a major component of fungal cell walls and this enzyme is responsible for its formation.
Probab=28.10 E-value=6.9e+02 Score=26.00 Aligned_cols=122 Identities=19% Similarity=0.204 Sum_probs=72.3
Q ss_pred ccchHHHHHH---HHHHHHHhhccCcCCCchHHHHHHHHHH--HhhhhhhhhhhhhhhhcCC---cchhHHHHHHhhhhh
Q 036992 247 VGNQLLTIVC---ILFVLAFLGILYPYNRGLLSTSLVLLYS--LTSVVAGYITSSFHNQFSD---AGWERSVFLAGILYF 318 (539)
Q Consensus 247 ~G~Qll~~~~---~~~~~a~~g~~~~~~~g~l~t~~i~~y~--~~~~i~Gy~s~~~yk~~~g---~~W~~~~~lt~~l~P 318 (539)
+++|+...+. ..++-+.+|+.- .+.|+..+..++--. +..+.+||+|--..|.+.| ++-.-.......++|
T Consensus 118 tAi~~g~~~a~~w~Ll~Ng~vgfQl-~eDGT~~Sl~ll~~ss~~~f~~t~~isl~Tf~~w~~~~~~~~~~~Lfvl~~l~p 196 (293)
T PF12271_consen 118 TAIQIGLISATCWCLLINGFVGFQL-WEDGTPLSLWLLRGSSLILFIGTFYISLDTFKSWTGYLSPTNTIALFVLYYLLP 196 (293)
T ss_pred HHHHHHHHHHHHHHHHHhhhheeee-ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchhHHHHHHHH
Confidence 4577755544 344455666664 577877765544322 2445566777766776655 221112344455889
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcChhHHHHHHHHHHHhhhhhhhhhchhcc
Q 036992 319 GPLTVTVLILNTVAVSYGATAALPFGTIMVIVFIYMLFAVPLLALGGRIGY 369 (539)
Q Consensus 319 ~~~~~~~~~~N~i~~~~~Ss~aipf~ti~~l~~lw~~v~~PL~~lG~~~g~ 369 (539)
++.+++++++..+....-=-.--|.+.++.-.+++..-++=.-.++..+..
T Consensus 197 ~i~l~~Y~v~q~~lv~~vL~e~wp~g~i~~~~~fFv~gQv~~y~~S~~IC~ 247 (293)
T PF12271_consen 197 AIFLVIYVVLQLILVLRVLGERWPLGYILLGVFFFVAGQVFLYVFSTHICE 247 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHHHHHHHhhHHHhc
Confidence 999999998887765544444557788776666666555544444444443
No 24
>smart00767 DCD DCD is a plant specific domain in proteins involved in development and programmed cell death. The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone.
Probab=27.71 E-value=52 Score=30.02 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=28.2
Q ss_pred hcCCcccccceEEEeccccccccccccccCHHHHHHHHHHHHhcceE
Q 036992 27 LNGDRLASALYELKFLEAKTGVTLCSKKLKVDEVAKFRKAVADDFYF 73 (539)
Q Consensus 27 L~Gdr~~~S~y~i~f~~~~~c~~lC~~~~t~~~~~~~~~~I~~~Y~~ 73 (539)
..|++-..=|.|++|.....|.+|.+ + .++.+|++||.-
T Consensus 72 f~~~~~s~fPaQVrf~i~~~C~PL~E-----~---~f~~aI~~nY~~ 110 (132)
T smart00767 72 FEGKKESRFPAQVRFRIRKDCKPLPE-----S---EFRSAILENYDG 110 (132)
T ss_pred hcCCCCCccCcEEEEEEeeeecCCCH-----H---HHHHHHHHhCcC
Confidence 34444333467899999999998864 2 289999999954
No 25
>PF12823 DUF3817: Domain of unknown function (DUF3817); InterPro: IPR023845 This domain is associated with, strictly bacterial integral membrane proteins. It occurs in proteins that on rare occasions are fused to transporter domains such as the major facilitator superfamily domain. Of three invariant residues, two occur as a His-Gly dipeptide in the middle of three predicted transmembrane helices.
Probab=27.65 E-value=21 Score=30.42 Aligned_cols=25 Identities=20% Similarity=0.404 Sum_probs=20.3
Q ss_pred CccCccchhhhcchhhHHHHHHHHH
Q 036992 393 WYQKSPCQMFIVGLLSFSTIALELH 417 (539)
Q Consensus 393 ~y~~~~~~~l~~GilPF~~i~iEl~ 417 (539)
|-.+.....+++|++||++...|-.
T Consensus 64 W~~~~~~~~llas~iPfg~f~~er~ 88 (92)
T PF12823_consen 64 WSLKRTLLALLASVIPFGTFWFERW 88 (92)
T ss_pred CChHHHHHHHHHHcccccHHHHHHH
Confidence 5555667789999999999998853
No 26
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=27.62 E-value=2e+02 Score=27.59 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=15.5
Q ss_pred HHHHHHhhhhhhhhhchhccc
Q 036992 350 VFIYMLFAVPLLALGGRIGYW 370 (539)
Q Consensus 350 ~~lw~~v~~PL~~lG~~~g~~ 370 (539)
+.+...+.+-..++|+++|+|
T Consensus 158 ~~~~~~~~~v~a~lG~~lG~k 178 (186)
T PF09605_consen 158 LIIIIIITFVGALLGALLGKK 178 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344445667788999999987
No 27
>PF07240 Turandot: Stress-inducible humoral factor Turandot; InterPro: IPR010825 This family consists of several Drosophila species specific Turandot proteins. The Turandot A (TotA) gene encodes a humoral factor, which is secreted from the fat body and accumulates in the body fluids. TotA is strongly induced upon bacterial challenge, as well as by other types of stress such as high temperature, mechanical pressure, dehydration, UV irradiation, and oxidative agents. It is also upregulated during metamorphosis and at high age. Flies that overexpress TotA show prolonged survival and retain normal activity at otherwise lethal temperatures. Although TotA is only induced by severe stress, it responds to a much wider range of stimuli than heat shock genes such as hsp70 or immune genes such as Cecropin A1 [].
Probab=26.33 E-value=37 Score=28.65 Aligned_cols=31 Identities=13% Similarity=0.121 Sum_probs=26.1
Q ss_pred ccCHHHHHHHHHHHHhcceEEEEecCcceee
Q 036992 54 KLKVDEVAKFRKAVADDFYFQMYYDDLPIWG 84 (539)
Q Consensus 54 ~~t~~~~~~~~~~I~~~Y~~~~~iD~LP~~~ 84 (539)
.+++++.+++.+.|++.=..+..|||+|+-+
T Consensus 27 ~L~~~~r~~~d~~i~~y~~~~~lVDGvPaQG 57 (85)
T PF07240_consen 27 PLTPQDRQRIDRFIRRYKEENNLVDGVPAQG 57 (85)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhcccCcCCCC
Confidence 4899999999999997766666999999843
No 28
>TIGR00895 2A0115 benzoate transport.
Probab=26.26 E-value=88 Score=31.94 Aligned_cols=28 Identities=11% Similarity=0.193 Sum_probs=18.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcCCc
Q 036992 277 TSLVLLYSLTSVVAGYITSSFHNQFSDA 304 (539)
Q Consensus 277 t~~i~~y~~~~~i~Gy~s~~~yk~~~g~ 304 (539)
......+.+++.+++.+++++-+.++.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 288 ATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 3444555666777777777777766544
No 29
>TIGR00819 ydaH p-Aminobenzoyl-glutamate transporter family. The p-Aminobenzoyl-glutamate transporter family includes two transporters, the AbgT (YdaH) protein of E. coli and MtrF of Neisseria gonorrhoea. AbgT is apparently cryptic in wild type cells, but when expressed on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs. p-Aminobenzoate is a constituent of and a precursor for the biosynthesis of folic acid.
Probab=26.03 E-value=4.2e+02 Score=29.78 Aligned_cols=50 Identities=20% Similarity=0.350 Sum_probs=30.6
Q ss_pred ccchHHHHHHHHHHHHHh---hccCcCC--C-------chHHHHHHHHHHHhhhhhhhhhhhh
Q 036992 247 VGNQLLTIVCILFVLAFL---GILYPYN--R-------GLLSTSLVLLYSLTSVVAGYITSSF 297 (539)
Q Consensus 247 ~G~Qll~~~~~~~~~a~~---g~~~~~~--~-------g~l~t~~i~~y~~~~~i~Gy~s~~~ 297 (539)
+|+-++....+.+ +.++ |.++... . ++++....++|.+.|++.|.+++++
T Consensus 267 Ag~~~l~fia~l~-ll~~P~~g~LR~~~tG~l~~SPf~~~iipii~~~Fli~givyG~~~g~i 328 (513)
T TIGR00819 267 AGVVFIAFIAAIA-LMIIPADGILRDPENGLVAGSPFIKGIVPFIFLFFALPGIAYGIATRSI 328 (513)
T ss_pred HHHHHHHHHHHHH-HHHHcCCCcccCCCCCCccCChHHHhHHHHHHHHHHHHHHHHHhhcCcc
Confidence 5666655554433 3344 5554211 1 4567777788888888888887753
No 30
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=25.81 E-value=7.4e+02 Score=25.43 Aligned_cols=41 Identities=7% Similarity=0.230 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhh-cCCcchhHHHHHHhh
Q 036992 275 LSTSLVLLYSLTSVVAGYITSSFHNQ-FSDAGWERSVFLAGI 315 (539)
Q Consensus 275 l~t~~i~~y~~~~~i~Gy~s~~~yk~-~~g~~W~~~~~lt~~ 315 (539)
..+...++|+++-+++=|+=|..-|+ .++|+|..+++.++.
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi 183 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGI 183 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHH
Confidence 34556666666555554555555554 455566655544443
No 31
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=24.49 E-value=1.8e+02 Score=31.13 Aligned_cols=18 Identities=33% Similarity=0.554 Sum_probs=9.1
Q ss_pred HHHHHhhhhhhhhhhhhh
Q 036992 281 LLYSLTSVVAGYITSSFH 298 (539)
Q Consensus 281 ~~y~~~~~i~Gy~s~~~y 298 (539)
+.-++++.++|+.+.|+.
T Consensus 308 ~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 308 LFAWLCSIFAGYLADFLK 325 (465)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333445555555555543
No 32
>COG5393 Predicted membrane protein [Function unknown]
Probab=23.57 E-value=87 Score=28.00 Aligned_cols=25 Identities=16% Similarity=0.131 Sum_probs=16.9
Q ss_pred CcCCCc-hHHHHHHHHHHHhhhhhhh
Q 036992 268 YPYNRG-LLSTSLVLLYSLTSVVAGY 292 (539)
Q Consensus 268 ~~~~~g-~l~t~~i~~y~~~~~i~Gy 292 (539)
.|.+|= .......++|++..+.+++
T Consensus 77 ~~tyRl~a~~a~~~vl~vl~~i~ciW 102 (131)
T COG5393 77 DPTYRLNAMIATTAVLLVLALIGCIW 102 (131)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455554 6666777778887777665
No 33
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=22.18 E-value=8.3e+02 Score=26.47 Aligned_cols=108 Identities=14% Similarity=0.274 Sum_probs=64.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhh-chhhccCCCCcchhhccCceEEecccCCCCCC-ccceeeeecccchHHH
Q 036992 176 KIHWFSFINSIVFILLLMGLLILLILRRLK-NDLRKCSSGDEEEDKEVGWKYIHGDVFRYPQN-ISLFSAVMGVGNQLLT 253 (539)
Q Consensus 176 ~ihw~SiiNS~vivl~l~~~v~~Il~r~l~-~D~~~y~~~~~~~~ee~GWKlvhgDVFR~P~~-~~lls~lvG~G~Qll~ 253 (539)
-++|=. .+..+..++.+....+.+.+- +|...-... +..+ .-+++|.|+- ..++..+++.|-|+..
T Consensus 163 ~~GWR~---~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~--~~~~-------~~~~l~~p~v~~~l~~t~l~~~g~F~~ 230 (394)
T COG2814 163 LFGWRA---TFLAIAVLALLALLLLWKLLPPSEISGSLPG--PLRT-------LLRLLRRPGVLLGLLATFLFMTGHFAL 230 (394)
T ss_pred HhhHHH---HHHHHHHHHHHHHHHHHHhCCCccCCCCCCc--chhH-------HHHHhcCchHHHHHHHHHHHHcchhhh
Confidence 345654 344445555555556666665 332210000 0000 2356888875 4556777778888755
Q ss_pred HHHH-HHHHHHhhccCcCCCchHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 036992 254 IVCI-LFVLAFLGILYPYNRGLLSTSLVLLYSLTSVVAGYITSSFHNQ 300 (539)
Q Consensus 254 ~~~~-~~~~a~~g~~~~~~~g~l~t~~i~~y~~~~~i~Gy~s~~~yk~ 300 (539)
-+-+ -++-...|+ +.+.++..++.|=..++++...+||+.+.
T Consensus 231 ftYi~P~L~~v~g~-----s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr 273 (394)
T COG2814 231 YTYIRPFLESVAGF-----SVSAVSLVLLAFGIAGFIGNLLGGRLADR 273 (394)
T ss_pred HHhHHHHHHHccCC-----CHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 4433 333333322 45678999999999999999999999875
No 34
>TIGR00893 2A0114 d-galactonate transporter.
Probab=21.69 E-value=3.1e+02 Score=27.54 Aligned_cols=26 Identities=8% Similarity=0.155 Sum_probs=15.8
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcCCcc
Q 036992 280 VLLYSLTSVVAGYITSSFHNQFSDAG 305 (539)
Q Consensus 280 i~~y~~~~~i~Gy~s~~~yk~~~g~~ 305 (539)
.....+.+.++....+++.+.++.++
T Consensus 257 ~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 257 ASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34445556666666777666666554
No 35
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.65 E-value=1.2e+03 Score=26.54 Aligned_cols=113 Identities=17% Similarity=0.290 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHhhcccc--cccchhHHHHHHHHHHHHHHHHHHHhhhhcccCC----------------CCccc---ch
Q 036992 410 STIALELHHLYASLWGYK--IFTPPGILFVMFIILLVLTAILSIGLTYIQLSVE----------------DHEWW---WR 468 (539)
Q Consensus 410 ~~i~iEl~~i~~s~W~~~--~y~~fgfL~~~~iil~i~~a~vsI~~~Y~~L~~E----------------dy~Ww---W~ 468 (539)
|+++.-.+.+-.-+|.++ ==-.|+-++....+...++.-.|-+.-|+--+.+ ..+|+ |.
T Consensus 408 Givf~~~f~lN~~lW~~~SSgAvPF~T~~~ll~LwF~isVPLsf~G~y~g~kk~~~e~PvrTNqIpRqIP~q~~y~~~~~ 487 (628)
T KOG1278|consen 408 GIVFAIFFVLNFFLWGKHSSGAVPFSTMVALLFLWFGISVPLSFVGGYFGFKKPAIEHPVRTNQIPRQIPEQPWYLNPIP 487 (628)
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhhHHHhhHHhhccCCCCCCCcccCCCcccCCCCccccchhh
Confidence 444444444444479764 2346788888888888888888888888655432 25776 45
Q ss_pred hhhcCChh---HHHHHHHHHhhheeecccccchhhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 036992 469 SVFRGGST---AIFMFAYSIYFYFRSNMSGFLQLSFFLGYNAAMCYAFFLILGSISFRASMI 527 (539)
Q Consensus 469 SF~~~gs~---~~y~f~Ysi~y~~~~~~~g~~~~~~yf~y~~l~s~~~~l~~G~iGflas~~ 527 (539)
+-+.+|.- ++|+.++.|+=-+ =.+ |.-+.||+.++.-+.+-+.|.=|+-+.++.
T Consensus 488 ~ili~GilPFg~ifIELfFI~~Si--W~~---qfYY~FGFLFlvfiiLvvtcaeisIvl~Yf 544 (628)
T KOG1278|consen 488 SILIAGILPFGAIFIELFFILSSI--WLN---QFYYMFGFLFLVFIILVVTCAEISIVLTYF 544 (628)
T ss_pred HHHhhcccchHHHHHHHHHHHHHH--Hhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666654 5677776554321 112 556668887777777777777777777664
No 36
>PF09183 DUF1947: Domain of unknown function (DUF1947); InterPro: IPR015266 Members of this entry are a set of hypothetical archaeal proteins. Their exact function has not, as yet, been defined. ; PDB: 1Q7H_A.
Probab=21.64 E-value=93 Score=24.91 Aligned_cols=19 Identities=11% Similarity=0.403 Sum_probs=14.2
Q ss_pred cCHHHHHHHHHHHHhcceE
Q 036992 55 LKVDEVAKFRKAVADDFYF 73 (539)
Q Consensus 55 ~t~~~~~~~~~~I~~~Y~~ 73 (539)
++++|.+.+.+.+++.|-+
T Consensus 5 LSkKe~k~~~~k~~~~ygI 23 (65)
T PF09183_consen 5 LSKKEIKEIKEKIKEKYGI 23 (65)
T ss_dssp --HHHHHHHHHHHHT-TT-
T ss_pred ccHHHHHHHHHHHHHHhCc
Confidence 6899999999999999965
No 37
>PF14093 DUF4271: Domain of unknown function (DUF4271)
Probab=21.23 E-value=7.3e+02 Score=23.74 Aligned_cols=16 Identities=13% Similarity=0.092 Sum_probs=9.4
Q ss_pred HHHHhhhhhhhhhhhh
Q 036992 282 LYSLTSVVAGYITSSF 297 (539)
Q Consensus 282 ~y~~~~~i~Gy~s~~~ 297 (539)
.-.+++.+.+|...+.
T Consensus 88 ~~~i~~~~~~~~~~K~ 103 (208)
T PF14093_consen 88 FGIIFLIVFLFFLLKF 103 (208)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334666666766654
No 38
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=21.02 E-value=1.5e+02 Score=30.26 Aligned_cols=90 Identities=20% Similarity=0.273 Sum_probs=51.0
Q ss_pred hhhhhhhhchhccccccCCCCCcccCCCCCCCCCCCCccCccchhhhcchhhHHHHHHHHHHHHHhhcccc--cccchhH
Q 036992 357 AVPLLALGGRIGYWFRSEFQAPSALNRYPREIPPLPWYQKSPCQMFIVGLLSFSTIALELHHLYASLWGYK--IFTPPGI 434 (539)
Q Consensus 357 ~~PL~~lG~~~g~~~~~~~~~P~~~n~ipR~IP~~p~y~~~~~~~l~~GilPF~~i~iEl~~i~~s~W~~~--~y~~fgf 434 (539)
.+| ++++-++|.. .++.+=..||+ |-++ -..+.+|++|-.=+.+ +++-+|+.+ .|.+-||
T Consensus 152 ~i~-~fla~~~G~~---------~v~~il~~iP~--~v~~--Gl~vaggmLPAvGfAm----Ll~~m~~k~~~~ff~lGF 213 (265)
T TIGR00822 152 AIP-ALIVALVSQS---------AVQAMLKAIPE--VVTH--GLQIAGGIIVVVGYAM----VLRMMFKAYLMPFFYLGF 213 (265)
T ss_pred HHH-HHHHHHcCHH---------HHHHHHHHCHH--HHHH--HHHHHHhhHHHHHHHH----HHHHHhhcchHHHHHHHH
Confidence 344 4777788863 12223334443 6554 3467899999655544 445566555 6778899
Q ss_pred HHHHHH-HHHHHHHHHHH--HhhhhcccCCCCc
Q 036992 435 LFVMFI-ILLVLTAILSI--GLTYIQLSVEDHE 464 (539)
Q Consensus 435 L~~~~i-il~i~~a~vsI--~~~Y~~L~~Edy~ 464 (539)
++.++. +-.+..+.+.+ ...|+..++..||
T Consensus 214 ~laayl~l~~l~iAiig~~~A~i~~~~~~~~~~ 246 (265)
T TIGR00822 214 LFAAYTDFSLLAFGAVGGAGALLYIQLNPKSHR 246 (265)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhcccccc
Confidence 888877 33333333333 3335555444444
Done!