BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037000
(969 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FFN|A Chain A, Crystal Structure Of Calcium-Free Human Gelsolin
pdb|3FFN|B Chain B, Crystal Structure Of Calcium-Free Human Gelsolin
Length = 782
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/742 (33%), Positives = 377/742 (50%), Gaps = 62/742 (8%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 59 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 118
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 119 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 178
Query: 132 AEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERA 190
E RLF +G+ V+ EVP S S N+ D FILD + I Q+ GSNS+ ER
Sbjct: 179 VVPNEVVVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERL 238
Query: 191 KALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEEN--N 248
KA +V + I+D G+ V V E+G P P +E+
Sbjct: 239 KATQVSKGIRDNERSGRARVHVSEEG--------TEPEAMLQVLGPKPALPAGTEDTAKE 290
Query: 249 NVVHSHSTKLYSVDKGQ-----AVPVEGDSLTRDLLETNKCYILDCGIE--VFVWMGRNT 301
+ + KLY V G ++ + + + L++ C+ILD G + +FVW G+
Sbjct: 291 DAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQA 350
Query: 302 SLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW--PQETNVTVSEDG 358
+ +ERK+A A + + D K + V+ EG ET +FK F W P +T DG
Sbjct: 351 NTEERKAALKTASDFITKMDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQT------DG 404
Query: 359 RG-----KVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGAD 413
G A ++R + L + + + D TG Q+WR+ G KV + A
Sbjct: 405 LGLSYLSSHIANVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPAT 464
Query: 414 QTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQA 473
+ Y GD YI Y+Y ++ +I W G QS +D+ A++ L +++ E + PVQ+
Sbjct: 465 YGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQS 524
Query: 474 RIYEGHEPXXXXXXXXXXXVL--KGGLS-DGYKTYIAEKGIPDETYKEDGVALFRIQGSG 530
R+ +G EP ++ KGG S +G +T A LF+++ +
Sbjct: 525 RVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPAS------------TRLFQVRANS 572
Query: 531 PDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQ 590
+A++V P A +LNS+ ++L S + W G S + + L +++
Sbjct: 573 AGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLR------ 626
Query: 591 PNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESD---PHLFSCTFSKGHLKVSEI 647
Q EG+E + FWE L GK+ Y + ++ + D P LF+C+ G + E+
Sbjct: 627 --AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEV 684
Query: 648 YN-FTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEV 706
Q+DL T+D+ +LD ++FVWVG+ + K ALT +++I D N
Sbjct: 685 PGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETD--PANRDRRT 742
Query: 707 PIYIVLEGSEPPFFTRFFT-WD 727
PI +V +G EPP F +F WD
Sbjct: 743 PITVVKQGFEPPSFVGWFLGWD 764
>pdb|1D0N|A Chain A, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin.
pdb|1D0N|B Chain B, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin
Length = 729
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/747 (33%), Positives = 380/747 (50%), Gaps = 68/747 (9%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 6 FLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGN 65
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 66 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 125
Query: 132 AEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERA 190
E RL +G+ V+ EVP S S N+ D FILD + I+Q+ GS S+ ER
Sbjct: 126 VVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRFERL 185
Query: 191 KALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNNV 250
KA +V + I+D G+ +V+V E+G L K T+ E +
Sbjct: 186 KATQVSKGIRDNERSGRAQVSVFEEG-----------AEPEAMLQVLGPKPTLPEATEDT 234
Query: 251 VHSHS-----TKLYSVDKGQ-----AVPVEGDSLTRDLLETNKCYILDCGIE--VFVWMG 298
V + KLY V G ++ + + + L + C+ILD G + +FVW G
Sbjct: 235 VKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKG 294
Query: 299 RNTSLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW--PQETNVTVS 355
+ +++ERK+A A + + D K + V+ EG ET +F+ F W P +T
Sbjct: 295 KQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQT----- 349
Query: 356 EDGRGKV-----AALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLS 410
+G G A ++R + L + + + D TG Q+WRV G KV +
Sbjct: 350 -EGLGLAYLSSHIAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVD 408
Query: 411 GADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLP 470
A + Y GD YI Y+Y ++ +I W G QS +D+ A++ L +++ E + P
Sbjct: 409 PATYGQFYGGDSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTP 468
Query: 471 VQARIYEGHEPXXXXXX--XXXXXVLKGGLS-DGYKTYIAEKGIPDETYKEDGVALFRIQ 527
VQ+R+ +G EP V KGG S +G +T A LF+++
Sbjct: 469 VQSRVVQGKEPAHLMSLFGGKPMIVYKGGTSREGGQTAPAS------------TRLFQVR 516
Query: 528 GSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLND 587
S +A+++ P A +LNS+ ++L S + W G S + + L +++
Sbjct: 517 ASSSGATRAVEIIPKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQELLRVLR--- 573
Query: 588 FVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPH---LFSCTFSKGHLKV 644
Q EG+E + FWE L GK+ Y + ++ + D H LF+C+ G +
Sbjct: 574 -----AQPVQVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNKIGRFVI 628
Query: 645 SEI-YNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLP 703
E+ F Q+DL T+D+ +LD ++FVWVG+ + K ALT +++I D +
Sbjct: 629 EEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPAHRD-- 686
Query: 704 HEVPIYIVLEGSEPPFFTRFFT-WDSA 729
PI +V +G EPP F +F WD +
Sbjct: 687 RRTPITVVKQGFEPPSFVGWFLGWDDS 713
>pdb|2FGH|A Chain A, Atp Bound Gelsolin
pdb|2FGH|B Chain B, Atp Bound Gelsolin
Length = 731
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/747 (33%), Positives = 380/747 (50%), Gaps = 68/747 (9%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 8 FLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGN 67
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 68 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 127
Query: 132 AEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERA 190
E RL +G+ V+ EVP S S N+ D FILD + I+Q+ GS S+ ER
Sbjct: 128 VVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRFERL 187
Query: 191 KALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNNV 250
KA +V + I+D G+ +V+V E+G L K T+ E +
Sbjct: 188 KATQVSKGIRDNERSGRAQVSVFEEG-----------AEPEAMLQVLGPKPTLPEATEDT 236
Query: 251 VHSHS-----TKLYSVDKGQ-----AVPVEGDSLTRDLLETNKCYILDCGIE--VFVWMG 298
V + KLY V G ++ + + + L + C+ILD G + +FVW G
Sbjct: 237 VKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKG 296
Query: 299 RNTSLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW--PQETNVTVS 355
+ +++ERK+A A + + D K + V+ EG ET +F+ F W P +T
Sbjct: 297 KQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQT----- 351
Query: 356 EDGRGKV-----AALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLS 410
+G G A ++R + L + + + D TG Q+WRV G KV +
Sbjct: 352 -EGLGLAYLSSHIAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVD 410
Query: 411 GADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLP 470
A + Y GD YI Y+Y ++ +I W G QS +D+ A++ L +++ E + P
Sbjct: 411 PATYGQFYGGDSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTP 470
Query: 471 VQARIYEGHEPXXXXXX--XXXXXVLKGGLS-DGYKTYIAEKGIPDETYKEDGVALFRIQ 527
VQ+R+ +G EP V KGG S +G +T A LF+++
Sbjct: 471 VQSRVVQGKEPAHLMSLFGGKPMIVYKGGTSREGGQTAPAS------------TRLFQVR 518
Query: 528 GSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLND 587
S +A+++ P A +LNS+ ++L S + W G S + + L +++
Sbjct: 519 ASSSGATRAVEIIPKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQELLRVLR--- 575
Query: 588 FVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPH---LFSCTFSKGHLKV 644
Q EG+E + FWE L GK+ Y + ++ + D H LF+C+ G +
Sbjct: 576 -----AQPVQVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNKIGRFVI 630
Query: 645 SEI-YNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLP 703
E+ F Q+DL T+D+ +LD ++FVWVG+ + K ALT +++I D +
Sbjct: 631 EEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPAHRD-- 688
Query: 704 HEVPIYIVLEGSEPPFFTRFFT-WDSA 729
PI +V +G EPP F +F WD +
Sbjct: 689 RRTPITVVKQGFEPPSFVGWFLGWDDS 715
>pdb|3FFK|A Chain A, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|D Chain D, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
Length = 377
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 198/353 (56%), Gaps = 21/353 (5%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 10 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 69
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 70 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 129
Query: 132 AEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERA 190
E RLF +G+ V+ EVP S S N+ D FILD + I Q+ GSNS+ ER
Sbjct: 130 VVPNEVVVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERL 189
Query: 191 KALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEEN--N 248
KA +V + I+D G+ V V E+G P P +E+
Sbjct: 190 KATQVSKGIRDNERSGRARVHVSEEG--------TEPEAMLQVLGPKPALPAGTEDTAKE 241
Query: 249 NVVHSHSTKLYSVDKGQ-----AVPVEGDSLTRDLLETNKCYILDCGIE--VFVWMGRNT 301
+ + KLY V G ++ + + + L++ C+ILD G + +FVW G+
Sbjct: 242 DAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQA 301
Query: 302 SLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW--PQETN 351
+ +ERK+A A + + D K + V+ EG ET +FK F W P +T+
Sbjct: 302 NTEERKAALKTASDFITKMDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQTD 354
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 39/362 (10%)
Query: 396 LQVWRVNGQEKVLLSGADQTKLYSGDCY-IFQYSYPGDEKEEILIGTWFGKQSVEDDRAS 454
LQ+WRV + V + ++GD Y I + + + + W G + +D+ +
Sbjct: 19 LQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGA 78
Query: 455 AISLASKMVESMKFLPVQARIYEGHEPXXXXXX-XXXXXVLKGGLSDGYKTYIAEKGIPD 513
A ++ + + VQ R +G E KGG++ G+K + P+
Sbjct: 79 AAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV-----PN 133
Query: 514 ETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQ 573
E + LF+++G ++A +V S N+ C+IL + + W G+ N
Sbjct: 134 EVVVQ---RLFQVKGR--RVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGS-----NS 183
Query: 574 ELVERQLDLIKLNDFVQPNLQSKSQK-----EGAESEQFWELLEGKSEYP--SQKIAREP 626
ER L +++ ++ N +S + EG E E ++L K P ++ A+E
Sbjct: 184 NRYER-LKATQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTEDTAKED 242
Query: 627 ESD---PHLFSCTFSKGHLKVSEIYN---FTQDDLMTEDIFILDC--HSEIFVWVGQQVD 678
++ L+ + G + VS + + F Q L +ED FILD +IFVW G+Q +
Sbjct: 243 AANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQAN 302
Query: 679 SKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFF-TW-DSAKTNMHGN 736
++ + AL FI + P + + ++ EG E P F +FF W D +T+ G
Sbjct: 303 TEERKAALKTASDFITK----MDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGLGL 358
Query: 737 SF 738
S+
Sbjct: 359 SY 360
>pdb|1RGI|G Chain G, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
Length = 346
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 196/349 (56%), Gaps = 25/349 (7%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 7 FLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGN 66
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 67 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 126
Query: 132 AEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERA 190
E RL +G+ V+ EVP S S N+ D FILD + I+Q+ GS S+ ER
Sbjct: 127 VVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRFERL 186
Query: 191 KALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNNV 250
KA +V + I+D G+ +V+V E+G L K T+ E +
Sbjct: 187 KATQVSKGIRDNERSGRAQVSVFEEG-----------AEPEAMLQVLGPKPTLPEATEDT 235
Query: 251 VHSHS-----TKLYSVDKGQ-----AVPVEGDSLTRDLLETNKCYILDCGIE--VFVWMG 298
V + KLY V G ++ + + + L + C+ILD G + +FVW G
Sbjct: 236 VKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKG 295
Query: 299 RNTSLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW 346
+ +++ERK+A A + + D K + V+ EG ET +F+ F W
Sbjct: 296 KQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNW 344
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 146/343 (42%), Gaps = 31/343 (9%)
Query: 396 LQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEIL---IGTWFGKQSVEDDR 452
LQ+WRV + V + ++GD Y+ + + IL + W G + +D+
Sbjct: 16 LQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTV--QLRNGILQYDLHYWLGNECSQDES 73
Query: 453 ASAISLASKMVESMKFLPVQARIYEGHEPXXXXXX-XXXXXVLKGGLSDGYKTYIAEKGI 511
+A ++ + + VQ R +G E KGG++ G+K +
Sbjct: 74 GAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV----- 128
Query: 512 PDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSE 571
P+E V +Q G ++A +V S N+ C+IL + ++ W G+ S+
Sbjct: 129 PNEV-----VVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGS-KSNR 182
Query: 572 NQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYP--SQKIAREPESD 629
+ L Q+ ++ Q +EGAE E ++L K P ++ +E ++
Sbjct: 183 FERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKPTLPEATEDTVKEDAAN 242
Query: 630 ---PHLFSCTFSKGHLKVSEIYN---FTQDDLMTEDIFILDC--HSEIFVWVGQQVDSKS 681
L+ + G + VS + + F Q L +ED FILD +IFVW G+Q + +
Sbjct: 243 RKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEE 302
Query: 682 KMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFF 724
+ AL FI + P + + ++ EG E P F +FF
Sbjct: 303 RKAALKTASDFISK----MDYPKQTQVSVLPEGGETPLFRQFF 341
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 42/219 (19%)
Query: 261 VDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGS 320
V + VPV +S C+ILD G ++ W G ++ ER A+ ++ + + +
Sbjct: 145 VVRATEVPVSWESFN-----NGDCFILDLGNNIYQWCGSKSNRFERLKATQVSKGI-RDN 198
Query: 321 DRSKSHMIRVIE-GFE---TVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGL 376
+RS + V E G E + P+ T TV ED + A L + +
Sbjct: 199 ERSGRAQVSVFEEGAEPEAMLQVLGPKPTLPEATEDTVKEDAANRKLAKLYKVSNGAGPM 258
Query: 377 LKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEE 436
+ + E P A Q L S DC+I + G
Sbjct: 259 VVSLVADENPFA-------------------------QGALRSEDCFILDHGKDGK---- 289
Query: 437 ILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARI 475
I W GKQ+ ++R +A+ AS + M + P Q ++
Sbjct: 290 --IFVWKGKQANMEERKAALKTASDFISKMDY-PKQTQV 325
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein
(Cap G) With Actin-Severing Activity In The Ca2+-Free
Form
Length = 347
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 174/350 (49%), Gaps = 8/350 (2%)
Query: 1 MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGA 60
M ++ S F G+ Q G+ +WR+E KPV V + + G FF+GDSY++L +
Sbjct: 1 MYTAIPQSGSPFPGSVQDPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEEVSH 60
Query: 61 LRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120
L H W+G+ +S+DE G A+ V+LD LGGR VQ+REVQG+E++ F+SYF +
Sbjct: 61 L----HLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKY 116
Query: 121 QEGGIASGFKRAEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQF 179
QEGG+ SGFK E RL+ +GK I E + S N D FILD IF +
Sbjct: 117 QEGGVESGFKHVVPNEVVVQRLYQVKGKKNIRATERALNWDSFNTGDCFILDLGQNIFAW 176
Query: 180 NGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPR 239
G S+I ER KA ++ I+D+ GK +V +V DG+
Sbjct: 177 CGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGNPEE 236
Query: 240 KMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGI--EVFVWM 297
+T + N + + + +LL ++ C++LD G+ ++++W
Sbjct: 237 DLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWK 296
Query: 298 GRNTSLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW 346
GR + ER++A AE + + + + ++ +G E+ +FK F W
Sbjct: 297 GRKANEKERQAALQVAEGFISRMQYAPNTQVEILPQGRESPIFKQFFKDW 346
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 153/345 (44%), Gaps = 38/345 (11%)
Query: 396 LQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASA 455
L VWRV + V ++ +Q +SGD Y+ ++ P +E + W G+QS D++ +
Sbjct: 21 LHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGP---EEVSHLHLWIGQQSSRDEQGAC 77
Query: 456 ISLASKMVESMKFLPVQARIYEGHEPXXXXXXX-XXXXVLKGGLSDGYKTYIAEKGIPDE 514
LA ++ + + PVQ R +G+E +GG+ G+K + + +
Sbjct: 78 AVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQR 137
Query: 515 TYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQE 574
Y Q G N++A + S N+ C+IL +F W G ++ +
Sbjct: 138 LY----------QVKGKKNIRATERALNWDSFNTGDCFILDLGQNIFAWCGGKSNILERN 187
Query: 575 LVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESD----- 629
R L L + Q Q + +G E + ++L K P+ K PE D
Sbjct: 188 KA-RDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPK---PALKEGN-PEEDLTADK 242
Query: 630 -----PHLFSCTFSKGHLKVSEIYN---FTQDDLMTEDIFILD--CHSEIFVWVGQQVDS 679
L+ + + G + ++++ + F + L+++D F+LD +I++W G++ +
Sbjct: 243 ANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANE 302
Query: 680 KSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFF 724
K + AL + E FI ++ P+ + I+ +G E P F +FF
Sbjct: 303 KERQAALQVAEGFISR---MQYAPN-TQVEILPQGRESPIFKQFF 343
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The
Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G
Length = 347
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 8/350 (2%)
Query: 1 MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGA 60
M ++ S F G+ Q G+ +WR+E KPV V + + G FF+GDSY++L +
Sbjct: 1 MYTAIPQSGSPFPGSVQDPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEEVSH 60
Query: 61 LRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120
L H W+G+ +S+DE G A+ V+LD LGGR VQ+REVQG+E++ F+SYF +
Sbjct: 61 L----HLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKY 116
Query: 121 QEGGIASGFKRAEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQF 179
QEGG+ SGFK E RL+ +G I E + S N D FILD IF +
Sbjct: 117 QEGGVESGFKHVVPNEVVVQRLYQVKGAKNIRATERALNWDSFNTGDCFILDLGQNIFAW 176
Query: 180 NGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPR 239
G S+I ER KA ++ I+D+ GK +V +V DG+
Sbjct: 177 CGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGNPEE 236
Query: 240 KMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGI--EVFVWM 297
+T + N + + + +LL ++ C++LD G+ ++++W
Sbjct: 237 DLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWK 296
Query: 298 GRNTSLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW 346
GR + ER++A AE + + + + ++ +G E+ +FK F W
Sbjct: 297 GRKANEKERQAALQVAEGFISRMQYAPNTQVEILPQGRESPIFKQFFKDW 346
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 38/345 (11%)
Query: 396 LQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASA 455
L VWRV + V ++ +Q +SGD Y+ ++ P +E + W G+QS D++ +
Sbjct: 21 LHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGP---EEVSHLHLWIGQQSSRDEQGAC 77
Query: 456 ISLASKMVESMKFLPVQARIYEGHEPXXXXXXX-XXXXVLKGGLSDGYKTYIAEKGIPDE 514
LA ++ + + PVQ R +G+E +GG+ G+K +P+E
Sbjct: 78 AVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHV-----VPNE 132
Query: 515 TYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQE 574
+ L++++G+ N++A + S N+ C+IL +F W G ++ +
Sbjct: 133 VVVQ---RLYQVKGA--KNIRATERALNWDSFNTGDCFILDLGQNIFAWCGGKSNILERN 187
Query: 575 LVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESD----- 629
R L L + Q Q + +G E + ++L K P+ K PE D
Sbjct: 188 KA-RDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPK---PALKEGN-PEEDLTADK 242
Query: 630 -----PHLFSCTFSKGHLKVSEIYN---FTQDDLMTEDIFILD--CHSEIFVWVGQQVDS 679
L+ + + G + ++++ + F + L+++D F+LD +I++W G++ +
Sbjct: 243 ANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANE 302
Query: 680 KSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFF 724
K + AL + E FI ++ P+ + I+ +G E P F +FF
Sbjct: 303 KERQAALQVAEGFISR---MQYAPN-TQVEILPQGRESPIFKQFF 343
>pdb|1NPH|A Chain A, Gelsolin Domains 4-6 In Active, Actin Free Conformation
Identifies Sites Of Regulatory Calcium Ions
Length = 329
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 174/346 (50%), Gaps = 30/346 (8%)
Query: 391 DCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVED 450
D TG Q+WR+ G KV + A + Y GD YI Y+Y ++ +I W G QS +D
Sbjct: 2 DGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQD 61
Query: 451 DRASAISLASKMVESMKFLPVQARIYEGHEPXXXXX--XXXXXXVLKGGLS-DGYKTYIA 507
+ A++ L +++ E + PVQ+R+ +G EP + KGG S DG +T A
Sbjct: 62 EVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSRDGGQTAPA 121
Query: 508 EKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNL 567
+ LF+++ S +A++V P + +LNS+ ++L S + W G
Sbjct: 122 S------------IRLFQVRASSSGATRAVEVMPKSGALNSNDAFVLKTPSAAYLWVG-A 168
Query: 568 TSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPE 627
+SE ++ ++L + + VQ +EG+E + FWE L GK+ Y + ++ +
Sbjct: 169 GASEAEKTAAQELLKVLRSQHVQ-------VEEGSEPDGFWEALGGKTSYRTSPRLKDKK 221
Query: 628 SD---PHLFSCTFSKGHLKVSEI-YNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKM 683
D P LF+C+ G + E+ Q+DL T+D+ +LD ++FVWVG+ + K
Sbjct: 222 MDAHPPRLFACSNRIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKT 281
Query: 684 HALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFT-WDS 728
ALT +++I D N PI +V +G EPP F +F WD+
Sbjct: 282 EALTSAKRYIETD--PANRDRRTPITVVRQGFEPPSFVGWFLGWDN 325
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 159/344 (46%), Gaps = 34/344 (9%)
Query: 14 GAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDT 73
G GQK +IWRIE V V +++G+F+ GDSY+IL G I+ W G +
Sbjct: 3 GTGQK---QIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY-RHGGRQGQIIYNWQGAQS 58
Query: 74 SQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYF--KPCIIPQEGGIASGFKR 131
+QDE +AI T +LD LGG VQ R VQG E +S F KP II + G G +
Sbjct: 59 TQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSRDGGQT 118
Query: 132 AEAEEHKTRLFVCRGKH--VIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQER 189
A A RLF R EV +LN +D F+L T S + + G+ +S E+
Sbjct: 119 APA---SIRLFQVRASSSGATRAVEVMPKSGALNSNDAFVLKTPSAAYLWVGAGASEAEK 175
Query: 190 AKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNN 249
A E+++ ++ + VE+G P + +
Sbjct: 176 TAAQELLKVLRSQH-------VQVEEGSEPDGFWEALGGKTSYRTSPRLK--------DK 220
Query: 250 VVHSHSTKLYSVDK--GQAV--PVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDE 305
+ +H +L++ G+ V V G+ + DL T+ +LD +VFVW+G+++ +E
Sbjct: 221 KMDAHPPRLFACSNRIGRFVIEEVPGELMQEDLA-TDDVMLLDTWDQVFVWVGKDSQEEE 279
Query: 306 RKSASGAAEELLKG--SDRSKSHMIRVI-EGFETVMFKSKFDCW 346
+ A +A+ ++ ++R + I V+ +GFE F F W
Sbjct: 280 KTEALTSAKRYIETDPANRDRRTPITVVRQGFEPPSFVGWFLGW 323
>pdb|1P8X|A Chain A, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|B Chain B, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|C Chain C, The Calcium-activated C-terminal Half Of Gelsolin
pdb|2FH1|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH2|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH3|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH4|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
Length = 344
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
Query: 391 DCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVED 450
D TG Q+WR+ G KV + A + Y GD YI Y+Y ++ +I W G QS +D
Sbjct: 4 DGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQD 63
Query: 451 DRASAISLASKMVESMKFLPVQARIYEGHEPXXXXX--XXXXXXVLKGGLS-DGYKTYIA 507
+ A++ L +++ E + PVQ+R+ +G EP + KGG S +G +T A
Sbjct: 64 EVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPA 123
Query: 508 EKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNL 567
LF+++ + +A++V P A +LNS+ ++L S + W G
Sbjct: 124 S------------TRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTG 171
Query: 568 TSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPE 627
S + + L +++ Q EG+E + FWE L GK+ Y + ++ +
Sbjct: 172 ASEAEKTGAQELLRVLR--------AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKK 223
Query: 628 SD---PHLFSCTFSKGHLKVSEIYN-FTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKM 683
D P LF+C+ G + E+ Q+DL T+D+ +LD ++FVWVG+ + K
Sbjct: 224 MDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKT 283
Query: 684 HALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFT-WD 727
ALT +++I D N PI +V +G EPP F +F WD
Sbjct: 284 EALTSAKRYIETD--PANRDRRTPITVVKQGFEPPSFVGWFLGWD 326
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 38/346 (10%)
Query: 14 GAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDT 73
G GQK +IWRIE V V +++G+F+ GDSY+IL G I+ W G +
Sbjct: 5 GTGQK---QIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY-RHGGRQGQIIYNWQGAQS 60
Query: 74 SQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYF--KPCIIPQEGGIASGFKR 131
+QDE +AI T +LD LGG VQ R VQG E +S F KP II + G G +
Sbjct: 61 TQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQT 120
Query: 132 AEAEEHKTRLFVCRGKHVIHVK--EVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQER 189
A A TRLF R + EV +LN +D F+L T S + + G+ +S E+
Sbjct: 121 APA---STRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEK 177
Query: 190 AKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNN 249
A E+++ + + + V +G P + +
Sbjct: 178 TGAQELLRVL-------RAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLK--------DK 222
Query: 250 VVHSHSTKLYSVDKG------QAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSL 303
+ +H +L++ + VP E L ++ L T+ +LD +VFVW+G+++
Sbjct: 223 KMDAHPPRLFACSNKIGRFVIEEVPGE---LMQEDLATDDVMLLDTWDQVFVWVGKDSQE 279
Query: 304 DERKSASGAAEELLKG--SDRSKSHMIRVI-EGFETVMFKSKFDCW 346
+E+ A +A+ ++ ++R + I V+ +GFE F F W
Sbjct: 280 EEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLGW 325
>pdb|1H1V|G Chain G, Gelsolin G4-G6ACTIN COMPLEX
Length = 331
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
Query: 391 DCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVED 450
D TG Q+WR+ G KV + A + Y GD YI Y+Y ++ +I W G QS +D
Sbjct: 4 DGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQD 63
Query: 451 DRASAISLASKMVESMKFLPVQARIYEGHEPXXXXX--XXXXXXVLKGGLS-DGYKTYIA 507
+ A++ L +++ E + PVQ+R+ +G EP + KGG S +G +T A
Sbjct: 64 EVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPA 123
Query: 508 EKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNL 567
LF+++ + +A++V P A +LNS+ ++L S + W G
Sbjct: 124 S------------TRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTG 171
Query: 568 TSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPE 627
S + + L +++ Q EG+E + FWE L GK+ Y + ++ +
Sbjct: 172 ASEAEKTGAQELLRVLR--------AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKK 223
Query: 628 SD---PHLFSCTFSKGHLKVSEIYN-FTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKM 683
D P LF+C+ G + E+ Q+DL T+D+ +LD ++FVWVG+ + K
Sbjct: 224 MDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKT 283
Query: 684 HALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFT-WD 727
ALT +++I D N PI +V +G EPP F +F WD
Sbjct: 284 EALTSAKRYIETD--PANRDRRTPITVVKQGFEPPSFVGWFLGWD 326
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 38/346 (10%)
Query: 14 GAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDT 73
G GQK +IWRIE V V +++G+F+ GDSY+IL G I+ W G +
Sbjct: 5 GTGQK---QIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY-RHGGRQGQIIYNWQGAQS 60
Query: 74 SQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYF--KPCIIPQEGGIASGFKR 131
+QDE +AI T +LD LGG VQ R VQG E +S F KP II + G G +
Sbjct: 61 TQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQT 120
Query: 132 AEAEEHKTRLFVCRGKHVIHVK--EVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQER 189
A A TRLF R + EV +LN +D F+L T S + + G+ +S E+
Sbjct: 121 APA---STRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEK 177
Query: 190 AKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNN 249
A E+++ + + + V +G P + +
Sbjct: 178 TGAQELLRVL-------RAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLK--------DK 222
Query: 250 VVHSHSTKLYSVDKG------QAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSL 303
+ +H +L++ + VP E L ++ L T+ +LD +VFVW+G+++
Sbjct: 223 KMDAHPPRLFACSNKIGRFVIEEVPGE---LMQEDLATDDVMLLDTWDQVFVWVGKDSQE 279
Query: 304 DERKSASGAAEELLKG--SDRSKSHMIRVI-EGFETVMFKSKFDCW 346
+E+ A +A+ ++ ++R + I V+ +GFE F F W
Sbjct: 280 EEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLGW 325
>pdb|3FG7|A Chain A, The Crystal Structure Of Villin Domain 6
pdb|3FG7|B Chain B, The Crystal Structure Of Villin Domain 6
Length = 398
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 166/353 (47%), Gaps = 42/353 (11%)
Query: 391 DCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVED 450
D +G +QVWR+ E V + Y GDCY+ Y+Y EK+ L+ W G Q+ +D
Sbjct: 59 DGSGEVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYLIGEKQHYLLYVWQGSQASQD 118
Query: 451 DRASAISLASKMVESMKFLPVQARIYEGHEPXXXXXXXXXXXVL-KGGLSDGYKTYIAEK 509
+ ++ A + + PVQ R+ G EP V+ +GG S +T E
Sbjct: 119 EITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTS---RTNNLET 175
Query: 510 GIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTS 569
G LF++QG+G +N +A +V A LNS+ ++L S + W G S
Sbjct: 176 G--------PSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCS 227
Query: 570 SENQELVERQLDLIKLNDFVQPNLQSKSQK----EGAESEQFWELLEGKSEYPSQKIARE 625
+ +E+ + D I S+++K EG E FW L GK+ Y + K +E
Sbjct: 228 GDEREMAKMVADTI-----------SRTEKQVVVEGQEPANFWMALGGKAPYANTKRLQE 276
Query: 626 PE--SDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKM 683
P LF C+ G +EI +F QDDL +D+F+LD ++F W+G+ + + K
Sbjct: 277 ENLVITPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEKK 336
Query: 684 HALTIGEKFI-----GHDFLLENLPHEVPIYIVLEGSEPPFFTRFF-TWDSAK 730
A T ++++ G D E PI +V +G EPP FT +F WD K
Sbjct: 337 AAATTAQEYLKTHPSGRD-------PETPIIVVKQGHEPPTFTGWFLAWDPFK 382
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 160/344 (46%), Gaps = 36/344 (10%)
Query: 14 GAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHY-WLGKD 72
G+G+ +++WRIEN + V V G F+ GD Y++L T G +H + Y W G
Sbjct: 60 GSGE---VQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYLI--GEKQHYLLYVWQGSQ 114
Query: 73 TSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRA 132
SQDE +A + V LD G VQ R G E +S FK ++ +GG + R
Sbjct: 115 ASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTS----RT 170
Query: 133 EAEEH--KTRLFVCRGKHVIHVK--EVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQE 188
E TRLF +G + K EVP + LN +D+F+L TQS + + G S E
Sbjct: 171 NNLETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCSGDE 230
Query: 189 RAKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENN 248
R E+ + + DT + E VV +G+ P + EEN
Sbjct: 231 R----EMAKMVADTI--SRTEKQVVVEGQ-----EPANFWMALGGKAPYANTKRLQEENL 279
Query: 249 NVVHSHSTKLY--SVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDER 306
+ + +L+ S G+ + E +D LE + ++LD +VF W+G++ + +E+
Sbjct: 280 VI----TPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEK 335
Query: 307 KSASGAAEELLK----GSDRSKSHMIRVIEGFETVMFKSKFDCW 346
K+A+ A+E LK G D ++ +I V +G E F F W
Sbjct: 336 KAAATTAQEYLKTHPSGRD-PETPIIVVKQGHEPPTFTGWFLAW 378
>pdb|1T44|G Chain G, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 147
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 93/125 (74%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 8 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 67
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 68 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 127
Query: 132 AEAEE 136
E +E
Sbjct: 128 VETQE 132
>pdb|1P8Z|G Chain G, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
Length = 136
Score = 147 bits (372), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 8 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 67
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 68 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 127
Query: 132 AEAEE 136
E
Sbjct: 128 VVPNE 132
>pdb|1D4X|G Chain G, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 126
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 90/119 (75%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 8 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 67
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFK 130
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 68 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFK 126
>pdb|2FF3|A Chain A, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|G Chain G, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
Length = 150
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 90/121 (74%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 30 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 89
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGFK
Sbjct: 90 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 149
Query: 132 A 132
Sbjct: 150 V 150
>pdb|1YAG|G Chain G, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
pdb|1YVN|G Chain G, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1.
pdb|1MDU|A Chain A, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|D Chain D, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1NLV|G Chain G, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|G Chain G, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|G Chain G, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
pdb|3CJB|G Chain G, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|G Chain G, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
Length = 125
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 89/118 (75%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 8 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 67
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF 129
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGF
Sbjct: 68 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 125
>pdb|3CI5|G Chain G, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 126
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 89/118 (75%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 9 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 68
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF 129
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGF
Sbjct: 69 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 126
>pdb|1EQY|S Chain S, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|S Chain S, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
Length = 125
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 88/118 (74%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 8 FLKAGKEPGLQIWRVEKFDLVPVPTCLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 67
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF 129
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGF
Sbjct: 68 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 125
>pdb|3CIP|G Chain G, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 128
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 89/118 (75%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 11 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 70
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF 129
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGF
Sbjct: 71 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 128
>pdb|1C0F|S Chain S, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
pdb|1C0G|S Chain S, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
pdb|1DEJ|S Chain S, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
pdb|3A5L|S Chain S, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5M|S Chain S, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|S Chain S, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|S Chain S, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 127
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 88/118 (74%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 10 FLKAGKEPGLQIWRVEKFDLVPVPTCLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 69
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF 129
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+ASGF
Sbjct: 70 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 127
>pdb|3TU5|B Chain B, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
Length = 297
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 12 FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
F AG++ G++IWR+E F V VP + +G FFTGD+YVILKT ++G L++D+HYWLG
Sbjct: 26 FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 85
Query: 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
+ SQDE+G AAI TV+LD L GRAVQ+REVQG E+ FL YFK + ++GG+AS ++
Sbjct: 86 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASKLRK 145
Query: 132 AEAEEHKTR 140
+ + R
Sbjct: 146 VAEQTSEGR 154
>pdb|2VIK|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t,
Determined By Solution Nmr, Minimized Average Structure
pdb|2VIL|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t,
Determined By Solution Nmr, 11 Structures
Length = 126
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Query: 20 GIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAG 79
GI+IWRIEN + V VP S+G F+ GD YV+L T + SG ++IHYWLGK++SQDE G
Sbjct: 17 GIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTRKTGSG-FSYNIHYWLGKNSSQDEQG 75
Query: 80 TAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFK 130
AAI T ++D LG AVQ+REVQGHE+E F +YFK +I ++GG+ASG K
Sbjct: 76 AAAIYTTQMDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 393 TGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDR 452
T +Q+WR+ E V + Y GDCY+ + I W GK S +D++
Sbjct: 15 TPGIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTRKTGSGFSYNIHYWLGKNSSQDEQ 74
Query: 453 ASAISLASKMVESMKFLPVQARIYEGHEPXXXXXXXXXXXVLK-GGLSDGYK 503
+A ++M E + + VQ R +GHE + K GG++ G K
Sbjct: 75 GAAAIYTTQMDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126
>pdb|3FG6|A Chain A, Structure Of The C-terminus Of Adseverin
pdb|3FG6|C Chain C, Structure Of The C-terminus Of Adseverin
pdb|3FG6|G Chain G, Structure Of The C-terminus Of Adseverin
pdb|3FG6|E Chain E, Structure Of The C-terminus Of Adseverin
pdb|3FG6|F Chain F, Structure Of The C-terminus Of Adseverin
pdb|3FG6|H Chain H, Structure Of The C-terminus Of Adseverin
pdb|3FG6|D Chain D, Structure Of The C-terminus Of Adseverin
pdb|3FG6|B Chain B, Structure Of The C-terminus Of Adseverin
Length = 371
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 178/388 (45%), Gaps = 41/388 (10%)
Query: 357 DGRGKV-----AALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSG 411
DG GKV A +K+ + L + + + D +G +++WRV ++ +
Sbjct: 10 DGFGKVYVTEKVAQIKQIPFDASKLHSSPQMAAQHNMVDDGSGKVEIWRVENNGRIQVDQ 69
Query: 412 ADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPV 471
+ Y GDCYI Y+YP + +I TW G + D+ ++ L ++ S+ V
Sbjct: 70 NSYGEFYGGDCYIILYTYPRGQ----IIYTWQGANATRDELTTSAFLTVQLDRSLGGQAV 125
Query: 472 QARIYEGHEPXXXXXXXXXXXVLKGGLSDGYKTYIAEKG--IPDETYKEDGVALFRIQGS 529
Q R+ +G EP ++ YK ++KG P + LF+++ +
Sbjct: 126 QIRVSQGKEPVHLLSLFKDKPLII------YKNGTSKKGGQAPAPPTR-----LFQVRRN 174
Query: 530 GPDNMQAIQVEPVAASLNSSYCYILH-NDSTVFTWSGNLTSSENQELVERQLDLIKLNDF 588
+ ++V+ A SLNS+ ++L ++ + W G S E ++ E +
Sbjct: 175 LASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAE----------Y 224
Query: 589 VQPNLQSKSQK--EGAESEQFWELLEGKSEYPSQKIAREPESD--PHLFSCTFSKGHLKV 644
V L+ K+ + EG E E+FW L GK +Y + + D P L+ C+ G +
Sbjct: 225 VASVLKCKTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNKTGRFVI 284
Query: 645 SEI-YNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLP 703
EI FTQDDL +D+ +LD +IF+W+G+ + K +L + ++ D
Sbjct: 285 EEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLETD--PSGRD 342
Query: 704 HEVPIYIVLEGSEPPFFTRFFT-WDSAK 730
PI I+ +G EPP FT +F WDS+K
Sbjct: 343 KRTPIVIIKQGHEPPTFTGWFLGWDSSK 370
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 29/334 (8%)
Query: 21 IEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGT 80
+EIWR+EN + V ++S+G+F+ GD Y+IL T G + I+ W G + ++DE T
Sbjct: 54 VEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPR--GQI---IYTWQGANATRDELTT 108
Query: 81 AAIKTVELDAALGGRAVQYREVQGHETEKFLSYF--KPCIIPQEGGIASGFKRAEAEEHK 138
+A TV+LD +LGG+AVQ R QG E LS F KP II + G G +A
Sbjct: 109 SAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNGTSKKG---GQAPAPP 165
Query: 139 TRLFVCRGK--HVIHVKEVPFSRSSLNHDDIFILDT-QSKIFQFNGSNSSIQERAKALEV 195
TRLF R + + EV +SLN +D+F+L Q+ + + G +S QE K E
Sbjct: 166 TRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGAS-QEEEKGAEY 224
Query: 196 VQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEENNNVVHSHS 255
V + KC+ +++G+ PL S+
Sbjct: 225 VASVL------KCKTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNK 278
Query: 256 TKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEE 315
T + +++ +P E T+D L + +LD ++F+W+G++ + E+K + +A+
Sbjct: 279 TGRFVIEE---IPGE---FTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKM 332
Query: 316 LLKG--SDRSKSHMIRVI-EGFETVMFKSKFDCW 346
L+ S R K I +I +G E F F W
Sbjct: 333 YLETDPSGRDKRTPIVIIKQGHEPPTFTGWFLGW 366
>pdb|2LLF|A Chain A, Sixth Gelsolin-like Domain Of Villin In 5 Mm Cacl2
Length = 107
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 630 PHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIG 689
P LF C+ G +EI +FTQDDL D+++LD +IF W+G+ + K A
Sbjct: 1 PRLFECSNKTGRFLATEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETA 60
Query: 690 EKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFF-TWD 727
++++ +L + PI +V +G EPP FT +F WD
Sbjct: 61 QEYLRSHPGSRDL--DTPIIVVKQGFEPPTFTGWFMAWD 97
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 264 GQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLK---GS 320
G+ + E T+D L+ N Y+LD ++F W+G+ + E+++A+ A+E L+ GS
Sbjct: 11 GRFLATEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETAQEYLRSHPGS 70
Query: 321 DRSKSHMIRVIEGFETVMFKSKFDCW 346
+ +I V +GFE F F W
Sbjct: 71 RDLDTPIIVVKQGFEPPTFTGWFMAW 96
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 140 RLFVCRGK--HVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQ 197
RLF C K + + V F++ L+ +D+++LDT +IF + G ++ E+ A E Q
Sbjct: 2 RLFECSNKTGRFLATEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETAQ 61
>pdb|1KCQ|A Chain A, Human Gelsolin Domain 2 With A Cd2+ Bound
Length = 104
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 140 RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYI 199
RLF +G+ V+ EVP S S N+ D FILD + I Q+ GSNS+ ER KA +V + I
Sbjct: 4 RLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGI 63
Query: 200 KDTYHDGKCEVAVVEDG 216
+D G+ V V E+G
Sbjct: 64 RDNERSGRARVHVSEEG 80
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 261 VDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGS 320
V + VPV +S C+ILD G + W G N++ ER A+ ++ ++ +
Sbjct: 13 VVRATEVPVSWESFN-----NGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKG-IRDN 66
Query: 321 DRSKSHMIRVIE 332
+RS + V E
Sbjct: 67 ERSGRARVHVSE 78
>pdb|1SVY|A Chain A, Severin Domain 2, 1.75 Angstrom Crystal Structure
Length = 114
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 42/73 (57%)
Query: 127 SGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSI 186
SGF + E+K RL G V EVP + SSLN D F+LD I+QFNGS SS
Sbjct: 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSP 60
Query: 187 QERAKALEVVQYI 199
QE+ KA EV + I
Sbjct: 61 QEKNKAAEVARAI 73
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 529 SGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDF 588
SG N + +V +SLNS C++L T++ ++G+ +S + + I
Sbjct: 19 SGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAIDAERK 78
Query: 589 VQPNLQSKSQKEGAESEQFWELLEGK 614
P ++ + + +FW+LL GK
Sbjct: 79 GLPKVEVFXETDSDIPAEFWKLLGGK 104
>pdb|1SVQ|A Chain A, Structure Of Severin Domain 2 In Solution
pdb|1SVR|A Chain A, Structure Of Severin Domain 2 In Solution
Length = 114
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 42/73 (57%)
Query: 127 SGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSI 186
SGF + E+K RL G V EVP + SSLN D F+LD I+QFNGS SS
Sbjct: 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSP 60
Query: 187 QERAKALEVVQYI 199
QE+ KA EV + I
Sbjct: 61 QEKNKAAEVARAI 73
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 529 SGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDF 588
SG N + +V +SLNS C++L T++ ++G+ +S + + I
Sbjct: 19 SGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAIDAERK 78
Query: 589 VQPNLQSKSQKEGAESEQFWELLEGK 614
P ++ + + +FW+LL GK
Sbjct: 79 GLPKVEVFCETDSDIPAEFWKLLGGK 104
>pdb|1UJS|A Chain A, Solution Structure Of The Villin Headpiece Domain Of Human
Actin-Binding Lim Protein Homologue (Kiaa0843 Protein)
Length = 88
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 909 IYPYERLKITSTDPI---TEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMA 965
IYPYE L +T+ ++D T+ E +LS EEF + FGM F +L WK+N+LK
Sbjct: 19 IYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQ 78
Query: 966 LQLF 969
+LF
Sbjct: 79 ARLF 82
>pdb|2L3X|A Chain A, Villin Head Piece Domain Of Human Ablim2
Length = 67
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 909 IYPYERLKITSTDPIT---EIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMA 965
IYPY+ L +T+ + ++D T+ E +LS EEF+E FGM + F +L WK+N LK
Sbjct: 4 IYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKK 63
Query: 966 LQLF 969
LF
Sbjct: 64 ALLF 67
>pdb|2RJV|A Chain A, Crystal Structure Of The H41y Mutant Of Villin Headpiece,
P 21 21 21 Space Group
pdb|2RJW|A Chain A, The Crystal Structure Of The H41y Mutant Of Villin
Headpiece, P61 Space Group.
pdb|2RJW|B Chain B, The Crystal Structure Of The H41y Mutant Of Villin
Headpiece, P61 Space Group
Length = 67
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQL 968
+P + L T+ + + +D +++E YLS E+F+ FGM + AF LP WKQ LK L
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSRKENYLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGL 66
Query: 969 F 969
F
Sbjct: 67 F 67
>pdb|3MYC|A Chain A, Crystal Structure Of Hp67 H41f - P212121
pdb|3MYA|A Chain A, Crystal Structure Of Hp67 H41f - P61
pdb|3MYA|B Chain B, Crystal Structure Of Hp67 H41f - P61
Length = 67
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQL 968
+P + L T+ + + +D +++E +LS E+F+ FGM + AF LP WKQ LK L
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSRKENFLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGL 66
Query: 969 F 969
F
Sbjct: 67 F 67
>pdb|1YU5|X Chain X, Crystal Structure Of The Headpiece Domain Of Chicken
Villin
pdb|2RJY|A Chain A, Crystal Structure Of Villin Headpiece, P21 21 21 Space
Group
pdb|2RJX|A Chain A, Crystal Structure Of The Headpiece Domain Of Chicken
Villin, P61 Space Group
pdb|2RJX|B Chain B, Crystal Structure Of The Headpiece Domain Of Chicken
Villin, P61 Space Group
pdb|1QQV|A Chain A, Solution Structure Of The Headpiece Domain Of Chicken
Villin
Length = 67
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQL 968
+P + L T+ + + +D +++E +LS E+F+ FGM + AF LP WKQ LK L
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSRKENHLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGL 66
Query: 969 F 969
F
Sbjct: 67 F 67
>pdb|1ZV6|A Chain A, Nmr Structure Of The Human Dematin Headpiece S74e Mutant
Length = 68
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 909 IYPYERLKITS---TDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMA 965
IYPYE L +T+ T +D + E +LS+E+F F M + F KL WK+N+LK
Sbjct: 5 IYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKK 64
Query: 966 LQLF 969
+LF
Sbjct: 65 AELF 68
>pdb|1YU8|X Chain X, Crystal Structure Of The R37a Mutant Of Villin Headpiece
Length = 67
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQL 968
+P + L T+ + + +D + +E +LS E+F+ FGM + AF LP WKQ LK L
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSAKENHLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGL 66
Query: 969 F 969
F
Sbjct: 67 F 67
>pdb|1QZP|A Chain A, Nmr Structure Of The Human Dematin Headpiece Domain
Length = 68
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 909 IYPYERLKITS---TDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMA 965
IYPYE L +T+ T +D + E +LS+E+F F M + F KL WK+N+LK
Sbjct: 5 IYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKK 64
Query: 966 LQLF 969
LF
Sbjct: 65 ASLF 68
>pdb|3NKJ|A Chain A, Crystal Structure Of Hp67 L61g
Length = 67
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQL 968
+P + L T+ + + +D +++E +LS E+F+ FGM + AF P WKQ LK L
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSRKENHLSDEDFKAVFGMTRSAFANGPLWKQQNLKKEKGL 66
Query: 969 F 969
F
Sbjct: 67 F 67
>pdb|1YU7|X Chain X, Crystal Structure Of The W64y Mutant Of Villin Headpiece
Length = 67
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQL 968
+P + L T+ + + +D +++E +LS E+F+ FGM + AF LP +KQ LK L
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSRKENHLSDEDFKAVFGMTRSAFANLPLYKQQNLKKEKGL 66
Query: 969 F 969
F
Sbjct: 67 F 67
>pdb|3MYE|X Chain X, Crystal Structure Of Hp67 L61gl
Length = 68
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 910 YPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYK-LPKWKQNKLKMALQ 967
+P + L T+ + + +D +++E +LS E+F+ FGM + AF LP WKQ LK
Sbjct: 7 FPLDVLVNTAAEDLPRGVDPSRKENHLSDEDFKAVFGMTRSAFANGLPLWKQQNLKKEKG 66
Query: 968 LF 969
LF
Sbjct: 67 LF 68
>pdb|2K6M|S Chain S, Solution Structure Of Human Supervillin Headpiece
pdb|2K6N|A Chain A, Solution Structure Of Human Supervillin Headpiece,
Minimized Average
Length = 67
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 909 IYPYERLKITSTDPITE-IDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQ 967
IYP L P+ E +D K E YL+ E+F M +D + LP WKQ LK A
Sbjct: 9 IYPLADLL---ARPLPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKG 65
Query: 968 LF 969
LF
Sbjct: 66 LF 67
>pdb|2PPZ|A Chain A, Nmr Solution Structure Of The Villin Headpiece Mutant G34l
Length = 36
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + AF LP WKQ LK LF
Sbjct: 2 LSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKLLF 36
>pdb|1VII|A Chain A, Thermostable Subdomain From Chicken Villin Headpiece, Nmr,
Minimized Average Structure
Length = 36
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + AF LP WKQ LK LF
Sbjct: 2 LSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGLF 36
>pdb|1YRF|A Chain A, Chicken Villin Subdomain Hp-35, N68h, Ph6.7
pdb|1YRI|A Chain A, Chicken Villin Subdomain Hp-35, N68h, Ph6.4
Length = 35
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + AF LP WKQ LK LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLWKQQHLKKEKGLF 35
>pdb|1WY3|A Chain A, Chicken Villin Subdomain Hp-35, K65(Nle), N68h, Ph7.0
pdb|1WY4|A Chain A, Chicken Villin Subdomain Hp-35, K65(nle), N68h, Ph5.1
Length = 35
Score = 37.0 bits (84), Expect = 0.049, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + AF LP W Q LK LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLWXQQHLKKEKGLF 35
>pdb|2JM0|A Chain A, Solution Structure Of Chicken Villin Headpiece Subdomain
Containing A Fluorinated Side Chain In The Core
Length = 35
Score = 36.6 bits (83), Expect = 0.072, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+FR GM + AF LP W+Q L+ LF
Sbjct: 1 LSDEDFRAVXGMTRSAFANLPLWRQQNLRRERGLF 35
>pdb|1UNC|A Chain A, Solution Structure Of The Human Villin C-Terminal
Headpiece Subdomain
Length = 36
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F + FGM AF LP+WKQ LK LF
Sbjct: 2 LSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 36
>pdb|2F4K|A Chain A, Chicken Villin Subdomain Hp-35, K65(Nle), N68h, K70(Nle),
Ph9
Length = 35
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + AF LP W Q L LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLWXQQHLXKEKGLF 35
>pdb|1EJV|C Chain C, Crystal Structure Of The H320q Variant Of Klebsiella
Aerogenes Urease
Length = 567
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC+
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCQ 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|3TRW|A Chain A, Crystal Structure Of Racemic Villin Headpiece Subdomain
Crystallized In Space Group P-1
pdb|3TRW|D Chain D, Crystal Structure Of Racemic Villin Headpiece Subdomain
Crystallized In Space Group P-1
Length = 35
Score = 33.5 bits (75), Expect = 0.62, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + AF LP KQ LK LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLAKQQHLKKEKGLF 35
>pdb|3TRV|A Chain A, Crystal Structure Of Quasiracemic Villin Headpiece
Subdomain Containing (F5phe17) Substitution
Length = 35
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
LS E+F+ FGM + A LP WKQ LK LF
Sbjct: 1 LSDEDFKAVFGMTRSAXANLPLWKQQHLKKEKGLF 35
>pdb|1K6M|A Chain A, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
pdb|1K6M|B Chain B, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
Length = 432
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 493 VLKGGLSDGYKTYIAEK--------GIPDET-----YKEDGVALFRIQGSGPDNMQAIQV 539
V+ GL KTYI+ K G P + Y+ + V+ + PDNM+A+Q+
Sbjct: 6 VIMVGLPARGKTYISTKLTRYLNFIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 65
Query: 540 --EPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELV 576
+ A+L + Y+ H + V + T+ E + L+
Sbjct: 66 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLI 104
>pdb|1EJT|C Chain C, Crystal Structure Of The H219q Variant Of Klebsiella
Aerogenes Urease
Length = 567
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1EJS|C Chain C, Crystal Structure Of The H219n Variant Of Klebsiella
Aerogenes Urease
Length = 567
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1FWI|C Chain C, Klebsiella Aerogenes Urease, H134a Variant
Length = 567
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1KRB|C Chain C, Crystal Structure Of Klebsiella Aerogenes Urease, Its
Apoenzyme And Two Active Site Mutants
Length = 567
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1KRA|C Chain C, Crystal Structure Of Klebsiella Aerogenes Urease, Its
Apoenzyme And Two Active Site Mutants
Length = 567
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1FWJ|C Chain C, Klebsiella Aerogenes Urease, Native
pdb|1EJX|C Chain C, Crystal Structure Of Wild-Type Klebsiella Aerogenes Urease
At 100k
pdb|1EJW|C Chain C, Crystal Structure Of Wild-type Klebsiella Aerogenes Urease
At 298k
pdb|2KAU|C Chain C, The Crystal Structure Of Urease From Klebsiella Aerogenes
At 2.2 Angstroms Resolution
Length = 567
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1A5M|C Chain C, K217a Variant Of Klebsiella Aerogenes Urease
pdb|1A5N|C Chain C, K217a Variant Of Klebsiella Aerogenes Urease, Chemically
Rescued By Formate And Nickel
Length = 566
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 260 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 319
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 320 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 370
>pdb|1EJU|C Chain C, Crystal Structure Of The H320n Variant Of Klebsiella
Aerogenes Urease
Length = 567
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCN 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1A5O|C Chain C, K217c Variant Of Klebsiella Aerogenes Urease, Chemically
Rescued By Formate And Nickel
pdb|1A5L|C Chain C, K217c Variant Of Klebsiella Aerogenes Urease
Length = 566
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 260 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 319
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 320 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 370
>pdb|1EJR|C Chain C, Crystal Structure Of The D221a Variant Of Klebsiella
Aerogenes Urease
Length = 567
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1EF2|A Chain A, Crystal Structure Of Manganese-Substituted Klebsiella
Aerogenes Urease
pdb|4EP8|C Chain C, Initial Urease Structure For Radiation Damage Experiment
At 100 K
pdb|4EPB|C Chain C, Final Urease Structure For Radiation Damage Experiment At
100 K
pdb|4EPD|C Chain C, Initial Urease Structure For Radiation Damage Experiment
At 300 K
pdb|4EPE|C Chain C, Final Urease Structure For Radiation Damage Experiment At
300 K
Length = 566
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 260 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 319
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 320 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 370
>pdb|1A5K|C Chain C, K217e Variant Of Klebsiella Aerogenes Urease
Length = 566
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 260 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCH 319
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 320 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 370
>pdb|3TJW|B Chain B, Crystal Structure Of Quasiracemic Villin Headpiece
Subdomain Containing (F5phe10) Substitution
Length = 34
Score = 33.1 bits (74), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 935 LSSEEFREKFGMKKDAFYKLPKWKQNKLK 963
LS E+F+ GM + AF LP WKQ LK
Sbjct: 1 LSDEDFKAVXGMTRSAFANLPLWKQQHLK 29
>pdb|1KRC|C Chain C, Crystal Structure Of Klebsiella Aerogenes Urease, Its
Apoenzyme And Two Active Site Mutants
Length = 567
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 90 AALGGRAVQYREVQG----HETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCR 145
AA+GGR + +G H + + P I+P + +EH L VC
Sbjct: 261 AAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCA 320
Query: 146 GKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVV 196
++V F+ S + + I D + F+ ++S Q + EV+
Sbjct: 321 HLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGEVI 371
>pdb|1UND|A Chain A, Solution Structure Of The Human Advillin C-Terminal
Headpiece Subdomain
Length = 37
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 934 YLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969
YLS ++F FG+ + F LP WKQ ++K LF
Sbjct: 2 YLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 37
>pdb|3NXQ|A Chain A, Angiotensin Converting Enzyme N Domain Glycsoylation
Mutant (Ndom389) In Complex With Rxp407
pdb|3NXQ|B Chain B, Angiotensin Converting Enzyme N Domain Glycsoylation
Mutant (Ndom389) In Complex With Rxp407
Length = 629
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 335 ETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFID 391
E V+F+S W +TN+T R + AALL ++ G E + Q F D
Sbjct: 29 EQVLFQSVAASWAHDTNITAENARRQEEAALLSQEFAEAWGQKAKELYEPIWQQFTD 85
>pdb|2XYD|A Chain A, Human Angiotenisn Converting Enzyme N-Domain In Complex
With Phosphinic Tripeptide
pdb|2XYD|B Chain B, Human Angiotenisn Converting Enzyme N-Domain In Complex
With Phosphinic Tripeptide
Length = 610
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 335 ETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFID 391
E V+F+S W +TN+T R + AALL ++ G E + Q F D
Sbjct: 29 EQVLFQSVAASWAHDTNITAENARRQEEAALLSQEFAEAWGQKAKELYEPIWQQFTD 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,204,429
Number of Sequences: 62578
Number of extensions: 1107055
Number of successful extensions: 2947
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2717
Number of HSP's gapped (non-prelim): 102
length of query: 969
length of database: 14,973,337
effective HSP length: 108
effective length of query: 861
effective length of database: 8,214,913
effective search space: 7073040093
effective search space used: 7073040093
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)