Query 037000
Match_columns 969
No_of_seqs 380 out of 1347
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 07:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037000.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037000hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0443 Actin regulatory prote 100.0 1E-219 2E-224 1870.5 73.0 816 1-969 1-827 (827)
2 KOG0444 Cytoskeletal regulator 100.0 1E-106 2E-111 904.7 18.9 690 13-731 495-1252(1255)
3 KOG0445 Actin regulatory prote 100.0 3.8E-99 8E-104 846.4 31.3 619 138-969 223-919 (919)
4 KOG0443 Actin regulatory prote 100.0 1.6E-61 3.5E-66 559.3 32.1 316 13-350 396-720 (827)
5 KOG0444 Cytoskeletal regulator 100.0 3E-46 6.5E-51 419.5 18.1 324 394-732 501-838 (1255)
6 KOG0445 Actin regulatory prote 100.0 1.6E-38 3.6E-43 358.3 17.3 289 20-351 524-838 (919)
7 PF02209 VHP: Villin headpiece 99.7 1.7E-17 3.7E-22 123.3 3.5 36 934-969 1-36 (36)
8 smart00153 VHP Villin headpiec 99.7 3.4E-17 7.4E-22 122.1 3.9 36 934-969 1-36 (36)
9 smart00262 GEL Gelsolin homolo 99.7 3.8E-16 8.2E-21 142.9 10.0 88 141-233 2-89 (90)
10 smart00262 GEL Gelsolin homolo 99.6 6.2E-16 1.4E-20 141.5 9.7 76 271-346 15-90 (90)
11 KOG1044 Actin-binding LIM Zn-f 99.4 6.8E-14 1.5E-18 158.7 3.6 63 907-969 605-670 (670)
12 PF00626 Gelsolin: Gelsolin re 99.3 1.9E-12 4.2E-17 114.2 6.7 75 149-228 2-76 (76)
13 PF00626 Gelsolin: Gelsolin re 99.3 1.2E-12 2.6E-17 115.5 4.4 71 269-340 5-76 (76)
14 COG5028 Vesicle coat complex C 96.2 0.01 2.3E-07 71.5 7.8 118 628-748 708-858 (861)
15 PTZ00395 Sec24-related protein 95.6 0.029 6.2E-07 71.7 8.3 113 628-747 1403-1551(1560)
16 KOG1984 Vesicle coat complex C 95.5 0.052 1.1E-06 66.5 9.6 111 628-745 857-998 (1007)
17 PTZ00395 Sec24-related protein 94.1 0.15 3.2E-06 65.5 8.9 34 272-305 1434-1467(1560)
18 KOG1984 Vesicle coat complex C 93.5 0.23 5.1E-06 61.0 8.7 66 272-338 881-973 (1007)
19 KOG1985 Vesicle coat complex C 93.3 0.12 2.7E-06 63.1 5.9 115 628-747 734-883 (887)
20 COG5028 Vesicle coat complex C 92.9 0.16 3.4E-06 61.7 6.0 65 273-337 737-828 (861)
21 KOG1985 Vesicle coat complex C 88.8 0.36 7.7E-06 59.3 3.7 32 272-303 763-794 (887)
22 PLN00162 transport protein sec 81.3 3.3 7.2E-05 52.5 7.4 44 628-675 619-662 (761)
23 PLN00162 transport protein sec 73.0 10 0.00022 48.3 8.4 80 255-339 620-717 (761)
24 PF00241 Cofilin_ADF: Cofilin/ 51.6 70 0.0015 30.8 8.1 54 415-468 47-104 (127)
25 KOG3655 Drebrins and related a 49.0 40 0.00088 39.8 6.7 109 7-115 12-134 (484)
26 smart00102 ADF Actin depolymer 44.7 92 0.002 30.1 7.7 78 18-95 15-105 (127)
27 PF00241 Cofilin_ADF: Cofilin/ 43.6 1E+02 0.0022 29.7 7.8 88 19-109 16-116 (127)
28 PLN03216 actin depolymerizing 42.4 2.3E+02 0.005 28.3 10.3 97 10-109 18-130 (141)
29 smart00102 ADF Actin depolymer 39.4 1.1E+02 0.0024 29.6 7.4 53 416-468 48-104 (127)
30 KOG3655 Drebrins and related a 32.7 76 0.0016 37.6 5.7 59 431-489 74-134 (484)
31 cd00013 ADF Actin depolymerisa 32.6 1.5E+02 0.0033 28.5 7.2 97 8-108 9-121 (132)
32 cd00013 ADF Actin depolymerisa 29.0 2.8E+02 0.0061 26.7 8.4 54 416-469 54-111 (132)
33 COG5014 Predicted Fe-S oxidore 21.7 80 0.0017 32.7 2.9 78 522-617 93-170 (228)
34 PF11330 DUF3132: Protein of u 21.6 71 0.0015 29.1 2.3 36 658-693 88-123 (124)
No 1
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=1e-219 Score=1870.49 Aligned_cols=816 Identities=57% Similarity=0.966 Sum_probs=751.7
Q ss_pred CCccccccchhhhcCCccccEEEEEEECceeeecCCCCccceecCCEEEEEEeeecCCCCcceEEEEEecCCCChhhHhH
Q 037000 1 MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGT 80 (969)
Q Consensus 1 ~~~~~~~~~~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~ 80 (969)
|+++|.++|++|+++|+++||+|||||||++++||++.||+||+|||||||+|+.++++.+.|+||||||+++|+||+|+
T Consensus 1 ~s~~~~~ld~af~~ag~~pGl~IWRIe~f~lv~VP~s~~G~Fy~GdaYIvL~t~~~k~~~l~~DIHyWLGkd~S~dE~g~ 80 (827)
T KOG0443|consen 1 MSMSMLDLDPAFQGAGQKPGLEIWRIENFELVPVPKSSHGKFYTGDAYIVLKTTLKKNGSLSYDIHYWLGKDSSQDEAGA 80 (827)
T ss_pred CCccccccCHHHHhcccCCceEEEEeccCeeeecchhccCceecCceEEEEehhhccCCccceeEEEEecCccchhhhcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEeeccCCcHhHHhccCCcEEEecCccCCCCccccccccceEEEEEeecceEEEEEecCCCC
Q 037000 81 AAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRS 160 (969)
Q Consensus 81 AA~~aveLd~~Lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rL~~vkGkr~v~~~eV~~s~s 160 (969)
||++|+|||+.|||.+|||||||||||+.||+|||+||||++||++|||+||+++.+.+|||||||+|+||++|||++|+
T Consensus 81 aAiktveLD~~Lgg~~vQhREVQg~ES~~FLsYFK~gi~~~~GGv~Sg~khv~~~~~~~rL~~~KGkr~vr~~eV~~~~s 160 (827)
T KOG0443|consen 81 AAIKTVELDDYLGGRAVQHREVQGHESEKFLSYFKPGIIYQEGGVASGFKHVETEEYQVRLFHCKGKRNVRVKEVPFSWS 160 (827)
T ss_pred eeeeeEehhhhhCCCcceeehhcccchHHHHhhccCCceecccccccCcccccccceeeEEEEEccceeEEEEEEEeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCcceeecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCccccccchhhHHHHcCCCCC-CCC
Q 037000 161 SLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAP-LPR 239 (969)
Q Consensus 161 SLns~DvFILd~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~~~e~~eFw~~lGg~~~-~~~ 239 (969)
|||++||||||+++.||||+|++||++||+||+++|+.|+|++|+|||+|.+||+|++..+++..+||..+||.++ +++
T Consensus 161 S~N~gDvFILD~g~~i~qw~G~~Ss~~ER~KAl~~~~~IrD~e~~Gr~~V~vvdd~~~~~d~d~~~~~~~~~g~~~~~~~ 240 (827)
T KOG0443|consen 161 SLNHGDVFILDTGSKIYQWNGPNSSIQERAKALEVVQYIRDNERDGRCEVAVVDDGKEAADSDLGEFWGFVLGFAPALPK 240 (827)
T ss_pred hcCCCcEEEEEcCCceEEEcCCcccHHHHHHHHHHHHHhhccCCCCceeEEEecCcccccCchHHHHHHhhcCcCccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988 554
Q ss_pred CCCcCccccccccccceEEEEee--CCCccc--ccCCCCcccccCCCcEEEEeCC-eEEEEEecCCCCHHHHHHHHHHHH
Q 037000 240 KMTISEENNNVVHSHSTKLYSVD--KGQAVP--VEGDSLTRDLLETNKCYILDCG-IEVFVWMGRNTSLDERKSASGAAE 314 (969)
Q Consensus 240 ~~~~~~~~~~~~~~~~~rLy~v~--~G~l~~--~e~~~lsq~~L~~~~vyILD~g-~eIyVW~Gk~as~~eR~~A~~~A~ 314 (969)
.. ++.++.+.....++||+|+ .|.+.+ +...||+|+||++++||||||| .+||||+|++|+.+||++||..|+
T Consensus 241 ~~--~~~~~~~~~s~~~kLYkVsd~~g~l~v~~va~~~l~qdlLd~~dCYILD~g~~~IfVW~Gr~as~~ERkaAm~~Ae 318 (827)
T KOG0443|consen 241 KS--PDDDDEQANSAAAKLYKVSDASGGLKVPVVADGPLTKDLLDTEDCYILDCGGGEIFVWKGRQASLDERKAAMSSAE 318 (827)
T ss_pred CC--cchhhhhhhccccEEEEEeccCCCccccccccchhhHHhhccCCeEEEecCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 33 3335566778899999999 366544 4556799999999999999998 999999999999999999999999
Q ss_pred HHHhcCCCCC-ceEEEecCCccchhhhcccccCCcCCccccccCcchhhhhhhhhcccccccccccCCCcCCCcccccCC
Q 037000 315 ELLKGSDRSK-SHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCT 393 (969)
Q Consensus 315 ~~i~~~~rp~-t~i~~V~eG~Ep~~FK~~F~~W~~~~~~~~~~~~~~kva~~~~~~~~dv~~l~~~~p~~~~~~~~~d~t 393 (969)
+||++++||. |+|++|.||.|++.||++|.+|++..++.+.+.++|++|++++++++||..|+++.+.+++++++|||+
T Consensus 319 eFlk~k~yP~~TqV~rv~EG~Esa~FKq~F~~W~~~~~t~~~~~~rG~va~l~q~~~~Dv~~L~~~~~~aa~~~mvddg~ 398 (827)
T KOG0443|consen 319 EFLKKKKYPPNTQVVRVLEGAESAPFKQLFDSWPDKDQTNGKEEGRGKVAALLQVKGFDVTGLHKSPKMAAQPQMVDDGS 398 (827)
T ss_pred HHHHhccCCCCceEEEecCCCcchhHHHHHhhCccccccccccccccccceeeeecccchhhcccCccccccccceecCC
Confidence 9999999988 999999999999999999999999998877888999999999888999999987766667777889999
Q ss_pred ccEEEEEEeCCeeeecCCccccccccCcEEEEEeecCC-CCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCCCeE
Q 037000 394 GNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPG-DEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQ 472 (969)
Q Consensus 394 g~l~VWrIe~~~~~~v~~~~~G~FysgdcYIVlytY~~-~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~~vq 472 (969)
|+++||||++.++++||..++|+||+||||||+|+|+. +.+.+|+||.|+|++|+++|+++|+.+|++|++.++|.|+|
T Consensus 399 G~~~Vwrv~~~~~~~v~~~~~g~fy~GdcYlvlYtY~~~~~~~~~iiY~W~G~qAs~ee~~~a~~~A~~l~~s~kg~~vq 478 (827)
T KOG0443|consen 399 GKLQVWRVEGDEKQPVDIADYGKFYGGDCYLVLYTYPRGEERTEHIIYVWQGKQASQEERAAAISLAKALVESLKGVPVQ 478 (827)
T ss_pred CcEEEEEEcCceeeecChHHhCcccCCCeEEEEEeeccCCcccceEEEEEecccCCHHHHHHHHHHHHHHhhhcCCceeE
Confidence 99999999999999999999999999999999999984 45999999999999999999999999999999999999999
Q ss_pred EEeeccCCChHHHhhcCc-EEEEeCcccCCccccccccCCCCCcccCCceEEEEEEecCCCCeEEEEeccCcCCCCCCCe
Q 037000 473 ARIYEGHEPIQFFSIFQS-FIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYC 551 (969)
Q Consensus 473 ~Rv~QGkEp~~Fl~lF~~-~ii~~Gg~~s~f~~~~~~~~~~~~~~~~~~~~Lf~V~G~~~~~~~a~eV~~~~ssLnS~d~ 551 (969)
+|++|||||+|||+||++ |||++||++. .+++|+...++||||+|+.++|++|+||++.++||||+||
T Consensus 479 ~rv~~GkEP~hF~~iFqgkliifkgg~s~-----------~g~~~~~~~t~LFqV~Gt~~~n~kAveV~~~A~SLNSsd~ 547 (827)
T KOG0443|consen 479 VRIYEGKEPPHFLAIFQGKLIIFKGGTSE-----------EGNTYPAPSTRLFQVQGTGPSNTKAVEVPAVASSLNSSDC 547 (827)
T ss_pred EEeecCCCChHHHHhhCCceEEEecCcCC-----------CCCccCCCceEEEEEeccCcccceeEeeccccccccccce
Confidence 999999999999999998 9999999873 2346778889999999999999999999999999999999
Q ss_pred EEEecCCeEEEEECCCCCHHHHHHHHHHHHHhhccCCCCCCcceEeeccCCChhHHHHhcCCCCCCCCccc-cCCCCCCC
Q 037000 552 YILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKI-AREPESDP 630 (969)
Q Consensus 552 FIL~~~~~vylW~Gk~ss~~er~~A~~va~~l~~~~~~~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~-~~~~~~~p 630 (969)
|||++++++|+|||++|+++||+||+.++..|+ +.+...+.||+||++||++|||+.+|++.++ .....++|
T Consensus 548 fvL~t~s~~ylW~G~gss~~e~e~A~~v~~~l~-------~~~~~~v~EG~Ep~~FWe~LGGk~~Y~~sk~~~~~~~~~P 620 (827)
T KOG0443|consen 548 FVLKTGSSVYLWCGKGSSGDEREMAKRVLDLLK-------RCQSTAVKEGSEPDEFWELLGGKAEYPSSKRLEEKPERDP 620 (827)
T ss_pred EEEecCCeEEEEeCCCCCHHHHHHHHHHHHHHh-------cCChhhhhcCCCchhhHHHcCCCCCCCcCccccccCCCCC
Confidence 999999999999999999999999999999997 2346789999999999999999999999985 34456899
Q ss_pred eeEEEEeccCeeEEeccccccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHHHHHHHHhhccccCCCCCCCCcEEE
Q 037000 631 HLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYI 710 (969)
Q Consensus 631 rLF~~s~~~G~~~v~Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~A~~Yl~~~~~~~~r~~~tpI~v 710 (969)
|||.|++.+|.|.++||++|+||||++|||||||||++||||||++++++||..|+.+|++|++++ ..+||++.|||++
T Consensus 621 rLF~Cs~~~g~f~~~EI~~F~QdDL~tdDi~lLDt~~evfvWvG~~a~~~eK~~Al~~~~~yl~~~-~p~gr~~~TPI~v 699 (827)
T KOG0443|consen 621 RLFSCSNKTGSFVVEEIYNFTQDDLMTDDIMLLDTWSEVFVWVGQEANEKEKEEALTIGQKYLETD-LPEGRDPRTPIYV 699 (827)
T ss_pred cEEEEEecCCcEEEEEecCcchhhccccceEEEecCceEEEEecCCCChhHHHHHHHHHHHHHhcc-CcccCCCCCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999 4459999999999
Q ss_pred ecCCCCCcccccccc-ccccccccCCchHHHHHHHhhCCCCCCCCCCCccCCCCCCCCCCCCCCcccccccccCCCcccc
Q 037000 711 VLEGSEPPFFTRFFT-WDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRSMSFSPDRVRV 789 (969)
Q Consensus 711 V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (969)
|+||+||++||+||. ||+.|| ||+++++.|+++.
T Consensus 700 V~qG~EPp~Ftg~F~~WD~~kw-----S~~~~~~~l~~~~---------------------------------------- 734 (827)
T KOG0443|consen 700 VKQGHEPPFFTGFFLSWDPSKW-----SFQKKLKDLKNKV---------------------------------------- 734 (827)
T ss_pred ecCCCCCChhhccccccCCccc-----ccchHHHHHhccc----------------------------------------
Confidence 999999999999999 999984 6788888898852
Q ss_pred cCCCchhhhcccccCCCCCCCCCCCCccccccCCCCCCCCCCCCCchhhHHHhhhccccCCCCCCCCCcccccccCCCCC
Q 037000 790 RGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPKSIRAKASPEP 869 (969)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (969)
.+++.++++++++++|. +++.+..+++
T Consensus 735 ~~~~~~~~~~~a~~~sk--------------~~~~~~~~~~--------------------------------------- 761 (827)
T KOG0443|consen 735 TYNARAISEISADVRSK--------------LYPDSLNPDS--------------------------------------- 761 (827)
T ss_pred ccchhhccchhhhhhcc--------------cccccCCCCc---------------------------------------
Confidence 24455666677666662 2222222110
Q ss_pred CCCCCCCCccccCccccccccccccccccCcccCCCCCCccChhhhhcccCCCCCCCCccccccCCCHHhHHHHhCCCHH
Q 037000 870 ANSKPESNSKENSMSSRIESLTIQEDVKEGEAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKD 949 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~vd~~~~e~yLs~~~F~~~f~m~~~ 949 (969)
.....+|||++|+.++.++.++|||+|||.|||++||+.+|||+|+
T Consensus 762 ----------------------------------~~p~~~~~~e~l~~~~~~~~~~id~~rrE~yLs~~dF~~~Fgmtk~ 807 (827)
T KOG0443|consen 762 ----------------------------------EAPRPAFPYEQLLTQSEDPVPDIDPTRREAYLSEEEFVSVFGMTKE 807 (827)
T ss_pred ----------------------------------cCcccCCCHHHHhccccCcCCCCChhHhhhhccHHHHHHHhCcCHH
Confidence 0011479999999986655444999999999999999999999999
Q ss_pred HHhcCchhHHHhhhhhcCCC
Q 037000 950 AFYKLPKWKQNKLKMALQLF 969 (969)
Q Consensus 950 ~f~~lp~wkq~~~kk~~~Lf 969 (969)
|||+||+|||++|||+.+||
T Consensus 808 eF~~LPkWKq~~lKk~~~LF 827 (827)
T KOG0443|consen 808 EFYALPKWKQNKLKKQFGLF 827 (827)
T ss_pred HHhhcchhHHHHHhhhhccC
Confidence 99999999999999999999
No 2
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1e-106 Score=904.71 Aligned_cols=690 Identities=30% Similarity=0.513 Sum_probs=579.2
Q ss_pred hcCCccccEEEEEEECceeeecCCCCccceecCCEEEEEEeeecCCCCcceEEEEEecCCCChhhHhHHHHHHHHHHHHh
Q 037000 13 QGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAAL 92 (969)
Q Consensus 13 ~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~L 92 (969)
+.+|+-||+.||.||||.++.+.+..||+||++||||||+|+...+|.++|.||||+|.+++.|...++|++||.|..+|
T Consensus 495 eDvGqlpGltiWeIENF~P~~~eEafHGkFYeaDcYiVLKT~~ddsG~L~weIfyWiG~eAtLDK~aCsAiHAVnLRN~L 574 (1255)
T KOG0444|consen 495 EDVGQLPGLTIWEIENFYPSIMEEAFHGKFYEADCYIVLKTTRDDSGQLRWEIFYWIGEEATLDKGACSAIHAVNLRNHL 574 (1255)
T ss_pred cccCCCCCceEEeehhhhhHHHHHHhccceecccEEEEEEeecccccccceeEEEEecccccccchhhhHHHhhhhhhhh
Confidence 36899999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCCceEEEeeccCCcHhHHhccCCcEEEecCc-cCCCCccccccccceEEEEEeec-ceEEEEEecCCCCCCCcCCccee
Q 037000 93 GGRAVQYREVQGHETEKFLSYFKPCIIPQEGG-IASGFKRAEAEEHKTRLFVCRGK-HVIHVKEVPFSRSSLNHDDIFIL 170 (969)
Q Consensus 93 gg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg-~~sgf~~~e~~~~~~rL~~vkGk-r~v~~~eV~~s~sSLns~DvFIL 170 (969)
|..|..+||.||.||.+||++|..-|+|.+|| .+|||..+|...+-+|||+|-++ ..|.+..||++-.||....||+|
T Consensus 575 gA~CRTvREEmgDEsEeFL~lF~~ei~YIEGGrTasGFYT~E~~~h~TRlYrv~~~g~~i~lEPVpl~~tSLDPRf~FlL 654 (1255)
T KOG0444|consen 575 GATCRTVREEMGDESEEFLTLFGEEIVYIEGGRTASGFYTTEKPAHLTRLYRVGVNGTAIELEPVPLSVTSLDPRFCFLL 654 (1255)
T ss_pred CchhhhhHHhhCccHHHHHHHhcceeEEEecCceecceeeecchHHhhhhheeccccceeEeeccCccccccCcceEEEE
Confidence 99999999999999999999999999999999 79999999988889999999877 68999999999999999999999
Q ss_pred ecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCccccccchhhHHHHcCCCCCCCCCCCcCcccccc
Q 037000 171 DTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNV 250 (969)
Q Consensus 171 d~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~~~e~~eFw~~lGg~~~~~~~~~~~~~~~~~ 250 (969)
|.|.+||+|.|-.|...--.||+.+|.+|..++|.|+|+|...-+|. ++.+||++|||....+..+ +.....+.
T Consensus 655 D~G~~IyiW~G~~s~~t~~~KARLfAEkinK~eRKgK~EI~l~rQg~-----e~pEFWqaLgg~p~e~~~~-ikeHVPEd 728 (1255)
T KOG0444|consen 655 DAGETIYIWSGYKSRITVSNKARLFAEKINKRERKGKSEIELCRQGR-----EPPEFWQALGGNPDEPQGA-IKEHVPED 728 (1255)
T ss_pred eCCceEEEEeccchhcccchHHHHHHHHhhhhhccCceeeehhhhcC-----CCHHHHHHhCCCCcccccc-hhhcCCcc
Confidence 99999999999999999999999999999999999999999999985 8899999999986554332 11112234
Q ss_pred ccccceEEEEee--CCCccccc-----CCCCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCC
Q 037000 251 VHSHSTKLYSVD--KGQAVPVE-----GDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRS 323 (969)
Q Consensus 251 ~~~~~~rLy~v~--~G~l~~~e-----~~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~~A~~~A~~~i~~~~rp 323 (969)
+....+|||+|. -|.|+.-. ...+.|++|++..||||||.+.||||+||+++.-.|.+|.++..++..+..||
T Consensus 729 f~p~qpkLYkV~lGmGyLELPQvel~P~~~l~q~lL~sk~VyiLDc~sDiF~W~GkKs~RLvraAa~KL~~EL~~M~dRP 808 (1255)
T KOG0444|consen 729 FVPEQPKLYKVNLGMGYLELPQVELLPKGILKQDLLGSKGVYILDCNSDIFLWIGKKSNRLVRAAAQKLVVELHQMIDRP 808 (1255)
T ss_pred cCCCCcceEEEccccceeecchhhhchhhHHHHHhhcCCeEEEEecCCceEEEecccchHHHHHHHHHHHHHHHhhhcCc
Confidence 556789999998 67765422 24578999999999999999999999999999999999999999999999999
Q ss_pred C-ceEEEecCCccchhhhcccccCCcCCcc--cc------ccCcchhhhh-hhhhccccccccccc-CC---CcCCCccc
Q 037000 324 K-SHMIRVIEGFETVMFKSKFDCWPQETNV--TV------SEDGRGKVAA-LLKRQGVNVKGLLKA-EP---VKEEPQAF 389 (969)
Q Consensus 324 ~-t~i~~V~eG~Ep~~FK~~F~~W~~~~~~--~~------~~~~~~kva~-~~~~~~~dv~~l~~~-~p---~~~~~~~~ 389 (969)
. +.|.++.||.|..+|+.+|.+|++.... +. ...|.-++.. .-.+-..|+..|+-. +| .+++.+.+
T Consensus 809 dyA~V~R~~EG~E~q~FrsKFagWDev~~VDyTRta~sV~~~pg~~k~~~~k~~~mraDLaALFlpRQp~MslaEaEqLm 888 (1255)
T KOG0444|consen 809 DYAQVYRETEGEESQMFRSKFAGWDEVVPVDYTRTADSVQRVPGDLKVIVKKDNMMRADLAALFLPRQPSMSLAEAEQLM 888 (1255)
T ss_pred chhheeeccCccHHHHHHHhhCCcceeeeeecccchHHHhhCcchhhHHHhhhhhhHHHHHHHhcCCCCCCChHHHHHHH
Confidence 9 9999999999999999999999987421 11 1111112111 001113455554322 12 23444556
Q ss_pred ccCCcc---EEEEEEeCCeeeecCCccccccccCcEEEEEeecCC------C----------------------CCceEE
Q 037000 390 IDCTGN---LQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPG------D----------------------EKEEIL 438 (969)
Q Consensus 390 ~d~tg~---l~VWrIe~~~~~~v~~~~~G~FysgdcYIVlytY~~------~----------------------~~~~~~ 438 (969)
.+++.. ++-+.++|...+.+|++++|+||++||||+|+.|-. + ...+|+
T Consensus 889 EewNyDLe~ME~FVLEgKKFvrLPeeEfG~FYT~dCYVFLCRY~vp~EE~Eeg~ed~~n~~advsks~e~~qPE~dfqCv 968 (1255)
T KOG0444|consen 889 EEWNYDLELMESFVLEGKKFVRLPEEEFGIFYTMDCYVFLCRYAVPPEEDEEGEEDHANPAADVSKSDEDDQPEMDFQCV 968 (1255)
T ss_pred HHhcccHHHHHHHhhcCchhccCCHHHhCeeeccceEEEEEeeecCCCCccccccccCCccccccccccccCCccceeEE
Confidence 666554 456889999999999999999999999999999920 0 013799
Q ss_pred EEEEcCCCCChhhH-HHHHHHHHHHHHHcCCCCeEEEeeccCCChHHHhhcCc-EEEEeCcccCCccccccccCCCCCcc
Q 037000 439 IGTWFGKQSVEDDR-ASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQS-FIVLKGGLSDGYKTYIAEKGIPDETY 516 (969)
Q Consensus 439 iy~W~G~~ss~de~-~aaa~~a~~l~~~~~g~~vq~Rv~QGkEp~~Fl~lF~~-~ii~~Gg~~s~f~~~~~~~~~~~~~~ 516 (969)
+||||||+++...+ .....+.......++++.-.||++|..|-+.||+.|+. +||++|...- .. . .
T Consensus 969 VYFWQGR~AsNMGWLtFTF~LQkkFe~~F~~kLEVVRm~QQQEN~KFlSHFKRKFiIhrGkRk~--~~---~-------~ 1036 (1255)
T KOG0444|consen 969 VYFWQGRDASNMGWLTFTFQLQKKFEEIFKDKLEVVRMYQQQENHKFLSHFKRKFIIHRGKRKL--TK---N-------L 1036 (1255)
T ss_pred EEEecCCccCccceEEEEEEehhhHHHhcccceeeeeHhhhhhhhHHHHHhhhhheeeccccch--hh---h-------h
Confidence 99999999998876 34556677788889999999999999999999999995 7777776431 00 0 1
Q ss_pred cCCceEEEEEEecCC-CCeEEEEeccCcCCCCCCCeEEEec-------CCeEEEEECCCCCHHHHHHHHHHHHHhhccCC
Q 037000 517 KEDGVALFRIQGSGP-DNMQAIQVEPVAASLNSSYCYILHN-------DSTVFTWSGNLTSSENQELVERQLDLIKLNDF 588 (969)
Q Consensus 517 ~~~~~~Lf~V~G~~~-~~~~a~eV~~~~ssLnS~d~FIL~~-------~~~vylW~Gk~ss~~er~~A~~va~~l~~~~~ 588 (969)
-...+.|||+|.++. -.+|.+||.+.++.|||.+||||.. ++.+|+|.|+.|+++|++.|..+......
T Consensus 1037 G~~~pelfq~R~NGsalctR~IQin~da~~LnS~FC~iL~vPFe~~~~~gvvy~w~gk~sdp~e~~~a~d~~~~~~d--- 1113 (1255)
T KOG0444|consen 1037 GGKWPELFQMRANGSALCTRTIQINCDANQLNSAFCHMLRIPFEEDGHRGVVYVWMGKDSDPREHEFASDLVVRDDD--- 1113 (1255)
T ss_pred cCCCchheeeecCCccceeeeEEecCcHHHHhhhhHheEecccccCCCceEEEEEeccCCChHHHHHHHHhcCcccc---
Confidence 123468999998765 5789999999999999999999975 36789999999999999998655433221
Q ss_pred CCCCcceEeeccCCChhHHHHhcCCCCCCCCccccCCCCCCCeeEEEEeccCeeEEeccc-cccccCCCCCCeEEEecCC
Q 037000 589 VQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIY-NFTQDDLMTEDIFILDCHS 667 (969)
Q Consensus 589 ~~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~~~~~~~prLF~~s~~~G~~~v~Ei~-~F~QdDL~~ddv~iLD~~~ 667 (969)
....++.+.||+|+.+||..+||+++|.... .....-|||+|++.+|+|.++|-. +||||||+.+|+||||.+.
T Consensus 1114 --~~~~~~~~~egee~e~fw~~~g~~k~ye~d~---~~~khtrlfrc~nekgyfa~sek~~DfcqDDl~dddim~ldng~ 1188 (1255)
T KOG0444|consen 1114 --NDFRIVEVQEGEENEEFWKVLGGKKKYETDS---SFVKHTRLFRCTNEKGYFAISEKTVDFCQDDLDDDDIMILDNGD 1188 (1255)
T ss_pred --chhhhhccCCccchHHHhcccCCCCccchhH---HHHHHHHHHhccchhhhhhHhHhhhhhhhccchhhhhhhhcccc
Confidence 3455778999999999999999999887542 123456899999999999999874 9999999999999999999
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHhhccccCCCCCCCCc--EEEecCCCCCcccccccc-cccccc
Q 037000 668 EIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVP--IYIVLEGSEPPFFTRFFT-WDSAKT 731 (969)
Q Consensus 668 eIfVWiG~~as~~ek~~Al~~A~~Yl~~~~~~~~r~~~tp--I~vV~qG~EP~~Ft~~F~-Wd~~k~ 731 (969)
.+|+|||...+..|-+.+...||-|....+. +....| ...+..|.|...|++||+ |...+.
T Consensus 1189 ~v~~w~g~~~s~ie~Kls~~a~Qvy~~~mr~---k~~e~pr~~~l~~~gre~~~F~~cfhaws~~~~ 1252 (1255)
T KOG0444|consen 1189 AVFLWIGARSSDIEAKLSYQAAQVYHASMRM---KANEKPRKFMLAVRGRESCRFRKCFHAWSKMKE 1252 (1255)
T ss_pred eeeeeecceehhHHHHHHHHHHHHHHHhccc---ccccchHHHHHHHhcchhhhhHHHHHHHHHhhc
Confidence 9999999999999999999999999998764 333444 467899999999999999 987654
No 3
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=3.8e-99 Score=846.41 Aligned_cols=619 Identities=24% Similarity=0.422 Sum_probs=495.7
Q ss_pred ceEEEEEeecceEEEEEecCCCCCCCcCCcceeecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccC-CCce-eEEEeeC
Q 037000 138 KTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYH-DGKC-EVAVVED 215 (969)
Q Consensus 138 ~~rL~~vkGkr~v~~~eV~~s~sSLns~DvFILd~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r-~G~~-~v~~Vde 215 (969)
..+|+||||+++|+++.|++..+|||+||||||..++.+|.|.|..||..|++||.++|..|..+.. +.++ .|++|.+
T Consensus 223 ~vMLlqVkGr~hVqtRLVeP~~ssln~gdCF~lv~~~~lf~yvG~faNviEk~kas~lc~~I~~k~dLgCtAt~ivtit~ 302 (919)
T KOG0445|consen 223 RVMLLQVKGRRHVQTRLVEPRASSLNSGDCFLLVSPHCLFLYVGEFANVIEKAKASELCTLIQTKRDLGCTATYIVTITE 302 (919)
T ss_pred ceEEEEEcccccceeEEechhhcccccCceEEEechhHHhhhhhHHHHHHHHhHHHHHHHHHhhcccCCceeEEEEEEec
Confidence 4899999999999999999999999999999999999999999999999999999999999976544 3344 4566665
Q ss_pred CccccccchhhHHHHcCCCCCCCCCCCcCccccccccccce---EEEEeeCCCcccccC--CCCcccccCCCcEEEEeCC
Q 037000 216 GKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNVVHSHST---KLYSVDKGQAVPVEG--DSLTRDLLETNKCYILDCG 290 (969)
Q Consensus 216 G~~~~~~e~~eFw~~lGg~~~~~~~~~~~~~~~~~~~~~~~---rLy~v~~G~l~~~e~--~~lsq~~L~~~~vyILD~g 290 (969)
.....-....||++|||...+.... ..+ +++.++...+ .+|++.+.++.+.+. ..++.++|++..|.|+|+|
T Consensus 303 -~~~~t~~~~~Fw~llg~qs~~~~~g-~a~-ede~fE~~iietN~iyr~~dd~l~p~~~~w~ipk~~~l~p~eVLvFDFG 379 (919)
T KOG0445|consen 303 -INTHTHAAKDFWKLLGGQSSYQSAG-DAK-EDELFEAAIIETNCIYRLMDDKLVPDDDYWKIPKCSLLQPKEVLVFDFG 379 (919)
T ss_pred -cchhHHHHHHHHHHhCCccchhhcC-Ccc-ccchHHHHHHHhhhHHhhcccccCccccccccccccccCcceEEEEecC
Confidence 4333334578999999876655432 233 4555555443 466666777777543 3578899999999999999
Q ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHHhc-----------------CCCCC-ceEEEecCCccchhhhcccccCCcCCcc
Q 037000 291 IEVFVWMGRNTSLDERKSASGAAEELLKG-----------------SDRSK-SHMIRVIEGFETVMFKSKFDCWPQETNV 352 (969)
Q Consensus 291 ~eIyVW~Gk~as~~eR~~A~~~A~~~i~~-----------------~~rp~-t~i~~V~eG~Ep~~FK~~F~~W~~~~~~ 352 (969)
+|||||.||.++...|+.|+++|+++++. .+||. +..-+|+||.|+.+||++|.|||+....
T Consensus 380 SEvYVW~Gk~~~~~~~~~A~~lAk~l~~~dy~nc~~npld~~~~~~~gRPeW~i~gkitq~~et~LFKeKFsDWpE~~r~ 459 (919)
T KOG0445|consen 380 SEVYVWHGKEVTLAQRKIAFQLAKHLWNFDYENCDINPLDLIPRKGQGRPEWAIFGKITQHNETILFKEKFSDWPELKRS 459 (919)
T ss_pred ceEEEEcCccCchHHHHHHHHHHHHHhCCCcccCccccccccccccCCCcceeeechhhcchhhhhHHHhhccchHhhhh
Confidence 99999999999999999999999998863 47999 9899999999999999999999987643
Q ss_pred ccccCcchhhhhhhhhcc-----cccccccccCCCc--------------------CCCcccccCCccEEEEEEeCCeee
Q 037000 353 TVSEDGRGKVAALLKRQG-----VNVKGLLKAEPVK--------------------EEPQAFIDCTGNLQVWRVNGQEKV 407 (969)
Q Consensus 353 ~~~~~~~~kva~~~~~~~-----~dv~~l~~~~p~~--------------------~~~~~~~d~tg~l~VWrIe~~~~~ 407 (969)
...+. |..+...+... +|+..|+. .|.. .+...+|-.+.++.+|+|.+|...
T Consensus 460 ~~~~k--~~~~~~k~np~~~v~a~~~t~~~~-ep~~~~~~iL~~~nlgrg~~l~d~~drr~fdVis~s~d~W~i~ef~~~ 536 (919)
T KOG0445|consen 460 NEKNK--GELAQHKENPRTDVKAYDVTRMVS-EPQTTAGTILDGVNLGRGYGLVDGHDRRQFDVISVSVDVWHILEFDYS 536 (919)
T ss_pred hccCc--hhhhhhhcCCceeeeehhheeccc-chhhhHHHHhhhhccCCceeeeecccceeeeeeeecccceeeehhhhh
Confidence 22222 22221111111 22222322 2221 001123345678999999999999
Q ss_pred ecCCccccccccCcEEEEEeecCC----------------CCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCCCe
Q 037000 408 LLSGADQTKLYSGDCYIFQYSYPG----------------DEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPV 471 (969)
Q Consensus 408 ~v~~~~~G~FysgdcYIVlytY~~----------------~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~~v 471 (969)
.+| +.+||||++|||||.|.|+. .||++|++|||||+|+|..|+|+||+++++||+ .+..
T Consensus 537 ~~~-~~~ghF~s~~~YvvrWky~Is~~Vr~~~~g~~~~r~~Gr~rcvyf~WqG~hst~~ekG~~AL~tvElD~---e~ga 612 (919)
T KOG0445|consen 537 RLP-QSIGHFHSGDAYVVRWKYMISTAVRSRQKGEHSVRAAGRERCVYFFWQGRHSTVSEKGTSALMTVELDE---ERGA 612 (919)
T ss_pred hhh-hhhhccccCceEEEEEEEEeehhhhhhhcCccchhhcccceEEEEEEccccCCcccccceeeeeeeecc---ccCc
Confidence 998 89999999999999999941 478899999999999999999999999999987 4668
Q ss_pred EEEeeccCCChHHHhhcC-cEEEEeCcccCCccccccccCCCCCcccCCceEEEEEEecCCCCeEEEEeccCcCCCCCCC
Q 037000 472 QARIYEGHEPIQFFSIFQ-SFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSY 550 (969)
Q Consensus 472 q~Rv~QGkEp~~Fl~lF~-~~ii~~Gg~~s~f~~~~~~~~~~~~~~~~~~~~Lf~V~G~~~~~~~a~eV~~~~ssLnS~d 550 (969)
|+||.||+||+.||++|+ +|+|+.|-... ..-|||+|+|..+.++-+.||.+..|+|+|+-
T Consensus 613 qvrv~qG~Ep~~Fl~lF~g~m~vhsgr~E~------------------~~erlY~v~G~vs~Et~l~Ev~c~~S~LRSr~ 674 (919)
T KOG0445|consen 613 QVRVLQGKEPPCFLQLFQGGMVVHSGRREE------------------EEERLYCVRGEVSVETNLLEVACHCSSLRSRT 674 (919)
T ss_pred eeEeecCCCccHHHHHhcCCeeEEcCchhh------------------chhheeeEecccccchhhhHhhhccccccccc
Confidence 999999999999999999 57777765321 12379999999999999999999999999999
Q ss_pred eEEEecC--CeEEEEECCCCCHHHHHHHHHHHHHhhc-cCCCCCCcceEeeccCCChhHHHHhcCCCCCCCCccccCCCC
Q 037000 551 CYILHND--STVFTWSGNLTSSENQELVERQLDLIKL-NDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPE 627 (969)
Q Consensus 551 ~FIL~~~--~~vylW~Gk~ss~~er~~A~~va~~l~~-~~~~~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~~~~~ 627 (969)
.||+.+. ..+|+|||..+-.+.|+.+..+|+.|.. +.-..++..+.+|+||++|..||++||-+. ..
T Consensus 675 smv~~~~~~~~~~~whg~k~~~ht~~v~v~aa~~~~~q~pgs~~~~~~~Eveegs~~~~~~~alGrkd----------f~ 744 (919)
T KOG0445|consen 675 SMVVLNVNKALIYLWHGCKAQAHTKEVGVTAANKIKEQCPGSSSKVTIHEVEEGSEPLGFWDALGRKD----------FN 744 (919)
T ss_pred eEEEEeccccceEEEecccCCcchhhHhHHHHHHHHHhCCCccccceeEeecCCCCchhhhhhccccc----------cc
Confidence 9999876 4699999999999999999999988753 321224567899999999999999999763 56
Q ss_pred CCCeeEEEEeccCeeEEecc-------ccccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHHHHHHHHhhccccCC
Q 037000 628 SDPHLFSCTFSKGHLKVSEI-------YNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLE 700 (969)
Q Consensus 628 ~~prLF~~s~~~G~~~v~Ei-------~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~A~~Yl~~~~~~~ 700 (969)
+.||||.+|... ++|+ ++|+|+||++. ||||.|++||+|. -..+|+.||++|.+||+.
T Consensus 745 ~~~RlF~~sS~q----a~els~p~rc~~pFsQ~~Ly~a--fLvD~gdelwLW~----w~s~r~~Aleta~~Ywk~----- 809 (919)
T KOG0445|consen 745 FAPRLFILSSSQ----ATELSYPARCPMPFSQEDLYSA--FLVDNGDELWLWQ----WASDRKSALETALQYWKN----- 809 (919)
T ss_pred ccceeeeccchh----hhhccCcccCCCcccHHHHhhh--eeeccCCeeEeeh----hhhHHHHHHHHHHHHHhc-----
Confidence 789999998765 4444 69999999965 9999999999999 256799999999999994
Q ss_pred CCCCCCcEEEecCCCCCcccccccc-ccccccccCCchHHHHHHHhhCCCCCCCCCCCccCCCCCCCCCCCCCCcccccc
Q 037000 701 NLPHEVPIYIVLEGSEPPFFTRFFT-WDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRS 779 (969)
Q Consensus 701 ~r~~~tpI~vV~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (969)
+ ..|-+||..|.||.+||++|+ |....... ++ +
T Consensus 810 -~--~~p~~vV~aGlEPl~Fk~lFp~We~red~D-------------~~-------~----------------------- 843 (919)
T KOG0445|consen 810 -L--KAPSYVVHAGLEPLTFKNLFPSWEHREDID-------------TE-------V----------------------- 843 (919)
T ss_pred -c--CCCceEEEcCcChhhhhhhCCCceeccccC-------------CC-------c-----------------------
Confidence 2 257899999999999999999 99876542 10 0
Q ss_pred cccCCCcccccCCCchhhhcccccCCCCCCCCCCCCccccccCCCCCCCCCCCCCchhhHHHhhhccccCCCCCCCCCcc
Q 037000 780 MSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPK 859 (969)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (969)
|.|+-. +.-+++-
T Consensus 844 --------------------------------s~~i~~----------------------v~d~La~------------- 856 (919)
T KOG0445|consen 844 --------------------------------SNQITL----------------------VEDVLAK------------- 856 (919)
T ss_pred --------------------------------CCchhH----------------------HHHHHHH-------------
Confidence 000000 0001111
Q ss_pred cccccCCCCCCCCCCCCCccccCccccccccccccccccCcccCCCCCCccChhhhhcccCCCCCCCCccccccCCCHHh
Q 037000 860 SIRAKASPEPANSKPESNSKENSMSSRIESLTIQEDVKEGEAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEE 939 (969)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~vd~~~~e~yLs~~~ 939 (969)
...++||+|.|+.. .||+||||+|+|.||+|||
T Consensus 857 ---------------------------------------------~c~T~yple~l~ar--pLPeGvdp~rLE~YLtdeD 889 (919)
T KOG0445|consen 857 ---------------------------------------------LCKTIYPLEDLLAR--PLPEGVDPLRLEIYLTDED 889 (919)
T ss_pred ---------------------------------------------HhhhcChHHHHhcC--CCCCCCCchhheeeechHH
Confidence 12257999999764 6999999999999999999
Q ss_pred HHHHhCCCHHHHhcCchhHHHhhhhhcCCC
Q 037000 940 FREKFGMKKDAFYKLPKWKQNKLKMALQLF 969 (969)
Q Consensus 940 F~~~f~m~~~~f~~lp~wkq~~~kk~~~Lf 969 (969)
|+.+|+|+|+||++||.|||++|||..|||
T Consensus 890 F~~al~~~R~Ef~alp~WKQ~~lkK~~GLF 919 (919)
T KOG0445|consen 890 FEFALDMTRDEFNALPAWKQVNLKKAKGLF 919 (919)
T ss_pred HHHHhccCHHHhhcchhhhhhhhhhhccCC
Confidence 999999999999999999999999999999
No 4
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=1.6e-61 Score=559.28 Aligned_cols=316 Identities=32% Similarity=0.516 Sum_probs=284.8
Q ss_pred hcCCccccEEEEEEECceeeecCCCCccceecCCEEEEEEeeecCCCCcceEEEEEecCCCChhhHhHHHHHHHHHHHHh
Q 037000 13 QGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAAL 92 (969)
Q Consensus 13 ~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~L 92 (969)
.+.|+ ++||||++...++||...||+||.||||||||+|...+.+..|.||.|+|++|+++|..+|+..|++|++.+
T Consensus 396 dg~G~---~~Vwrv~~~~~~~v~~~~~g~fy~GdcYlvlYtY~~~~~~~~~iiY~W~G~qAs~ee~~~a~~~A~~l~~s~ 472 (827)
T KOG0443|consen 396 DGSGK---LQVWRVEGDEKQPVDIADYGKFYGGDCYLVLYTYPRGEERTEHIIYVWQGKQASQEERAAAISLAKALVESL 472 (827)
T ss_pred cCCCc---EEEEEEcCceeeecChHHhCcccCCCeEEEEEeeccCCcccceEEEEEecccCCHHHHHHHHHHHHHHhhhc
Confidence 45677 999999999999999999999999999999999986666788999999999999999999999999999999
Q ss_pred CCCceEEEeeccCCcHhHHhccCCcEEEecCccCCCCccccc-cccceEEEEEeec--ceEEEEEecCCCCCCCcCCcce
Q 037000 93 GGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEA-EEHKTRLFVCRGK--HVIHVKEVPFSRSSLNHDDIFI 169 (969)
Q Consensus 93 gg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~-~~~~~rL~~vkGk--r~v~~~eV~~s~sSLns~DvFI 169 (969)
+|.+||.|+.||+||+||+++|++.+|+++||.+. +.+. +...+|||||+|. .+.++.||+..++||||.||||
T Consensus 473 kg~~vq~rv~~GkEP~hF~~iFqgkliifkgg~s~---~g~~~~~~~t~LFqV~Gt~~~n~kAveV~~~A~SLNSsd~fv 549 (827)
T KOG0443|consen 473 KGVPVQVRIYEGKEPPHFLAIFQGKLIIFKGGTSE---EGNTYPAPSTRLFQVQGTGPSNTKAVEVPAVASSLNSSDCFV 549 (827)
T ss_pred CCceeEEEeecCCCChHHHHhhCCceEEEecCcCC---CCCccCCCceEEEEEeccCcccceeEeeccccccccccceEE
Confidence 99999999999999999999999999999999764 2222 2335899999987 5789999999999999999999
Q ss_pred eecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCccccccchhhHHHHcCCCCCCCCCCCcCccccc
Q 037000 170 LDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNN 249 (969)
Q Consensus 170 Ld~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~~~e~~eFw~~lGg~~~~~~~~~~~~~~~~ 249 (969)
|.++..+|+|+|..|+..||..|..++..|+ +|+...|.||. |+++||++|||+.+++... . ..
T Consensus 550 L~t~s~~ylW~G~gss~~e~e~A~~v~~~l~------~~~~~~v~EG~-----Ep~~FWe~LGGk~~Y~~sk-~----~~ 613 (827)
T KOG0443|consen 550 LKTGSSVYLWCGKGSSGDEREMAKRVLDLLK------RCQSTAVKEGS-----EPDEFWELLGGKAEYPSSK-R----LE 613 (827)
T ss_pred EecCCeEEEEeCCCCCHHHHHHHHHHHHHHh------cCChhhhhcCC-----CchhhHHHcCCCCCCCcCc-c----cc
Confidence 9999999999999999999999999999997 36667788884 8999999999999887543 1 11
Q ss_pred cccccceEEEEee--CCCcccccCCCCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHHHHHHHHHHHHhcC---CC-C
Q 037000 250 VVHSHSTKLYSVD--KGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGS---DR-S 323 (969)
Q Consensus 250 ~~~~~~~rLy~v~--~G~l~~~e~~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~~A~~~A~~~i~~~---~r-p 323 (969)
......+|||.|+ .|.|+..|+..|+|+||.++|+|||||+++||||+|+.++.+||..|+.+|+.|++.. +| |
T Consensus 614 ~~~~~~PrLF~Cs~~~g~f~~~EI~~F~QdDL~tdDi~lLDt~~evfvWvG~~a~~~eK~~Al~~~~~yl~~~~p~gr~~ 693 (827)
T KOG0443|consen 614 EKPERDPRLFSCSNKTGSFVVEEIYNFTQDDLMTDDIMLLDTWSEVFVWVGQEANEKEKEEALTIGQKYLETDLPEGRDP 693 (827)
T ss_pred ccCCCCCcEEEEEecCCcEEEEEecCcchhhccccceEEEecCceEEEEecCCCChhHHHHHHHHHHHHHhccCcccCCC
Confidence 2233456999998 7999999999999999999999999999999999999999999999999999999766 55 6
Q ss_pred CceEEEecCCccchhhhcccccCCcCC
Q 037000 324 KSHMIRVIEGFETVMFKSKFDCWPQET 350 (969)
Q Consensus 324 ~t~i~~V~eG~Ep~~FK~~F~~W~~~~ 350 (969)
.|||++|.||+||+.|+.+|.+|+...
T Consensus 694 ~TPI~vV~qG~EPp~Ftg~F~~WD~~k 720 (827)
T KOG0443|consen 694 RTPIYVVKQGHEPPFFTGFFLSWDPSK 720 (827)
T ss_pred CCceEEecCCCCCChhhccccccCCcc
Confidence 699999999999999999999999875
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3e-46 Score=419.51 Aligned_cols=324 Identities=22% Similarity=0.433 Sum_probs=283.6
Q ss_pred ccEEEEEEeCCeeeecCCccccccccCcEEEEEeecC-CCCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCCCeE
Q 037000 394 GNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYP-GDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQ 472 (969)
Q Consensus 394 g~l~VWrIe~~~~~~v~~~~~G~FysgdcYIVlytY~-~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~~vq 472 (969)
..+.||.|++|-...+++..||+||.+||||||-|.. ..|..+|.||||+|.+++.|..+.+|.+|+.|.+++|..+..
T Consensus 501 pGltiWeIENF~P~~~eEafHGkFYeaDcYiVLKT~~ddsG~L~weIfyWiG~eAtLDK~aCsAiHAVnLRN~LgA~CRT 580 (1255)
T KOG0444|consen 501 PGLTIWEIENFYPSIMEEAFHGKFYEADCYIVLKTTRDDSGQLRWEIFYWIGEEATLDKGACSAIHAVNLRNHLGATCRT 580 (1255)
T ss_pred CCceEEeehhhhhHHHHHHhccceecccEEEEEEeecccccccceeEEEEecccccccchhhhHHHhhhhhhhhCchhhh
Confidence 3699999999999999999999999999999999985 467889999999999999999999999999999999999999
Q ss_pred EEeeccCCChHHHhhcCc-EEEEeCc-ccCCccccccccCCCCCcccCCceEEEEEEecCCCCeEEEEeccCcCCCCCCC
Q 037000 473 ARIYEGHEPIQFFSIFQS-FIVLKGG-LSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSY 550 (969)
Q Consensus 473 ~Rv~QGkEp~~Fl~lF~~-~ii~~Gg-~~s~f~~~~~~~~~~~~~~~~~~~~Lf~V~G~~~~~~~a~eV~~~~ssLnS~d 550 (969)
+|+.||.|+.+||++|+. +++++|| +.+||...+ .+..-+|||+|.+.+ .+++.--|++..+||..++
T Consensus 581 vREEmgDEsEeFL~lF~~ei~YIEGGrTasGFYT~E---------~~~h~TRlYrv~~~g-~~i~lEPVpl~~tSLDPRf 650 (1255)
T KOG0444|consen 581 VREEMGDESEEFLTLFGEEIVYIEGGRTASGFYTTE---------KPAHLTRLYRVGVNG-TAIELEPVPLSVTSLDPRF 650 (1255)
T ss_pred hHHhhCccHHHHHHHhcceeEEEecCceecceeeec---------chHHhhhhheecccc-ceeEeeccCccccccCcce
Confidence 999999999999999995 6778999 889997542 122357999999754 3677777888899999999
Q ss_pred eEEEecCCeEEEEECCCCCHHHHHHHHHHHHHhhccCCCCCCcceEeeccCCChhHHHHhcCCCCCCCCccc----cCC-
Q 037000 551 CYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKI----ARE- 625 (969)
Q Consensus 551 ~FIL~~~~~vylW~Gk~ss~~er~~A~~va~~l~~~~~~~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~----~~~- 625 (969)
||+|+.|.+||||.|-.|.-.--.+|+.+|+.|.+.+ +....+|+.+.+|+||.+||.+|||.+.-+.... ..+
T Consensus 651 ~FlLD~G~~IyiW~G~~s~~t~~~KARLfAEkinK~e-RKgK~EI~l~rQg~e~pEFWqaLgg~p~e~~~~ikeHVPEdf 729 (1255)
T KOG0444|consen 651 CFLLDAGETIYIWSGYKSRITVSNKARLFAEKINKRE-RKGKSEIELCRQGREPPEFWQALGGNPDEPQGAIKEHVPEDF 729 (1255)
T ss_pred EEEEeCCceEEEEeccchhcccchHHHHHHHHhhhhh-ccCceeeehhhhcCCCHHHHHHhCCCCcccccchhhcCCccc
Confidence 9999999999999999999988999999999997543 2245678899999999999999999876543221 111
Q ss_pred CCCCCeeEEEEeccCeeEEeccc-----cccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHHHHHHHHhhccccCC
Q 037000 626 PESDPHLFSCTFSKGHLKVSEIY-----NFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLE 700 (969)
Q Consensus 626 ~~~~prLF~~s~~~G~~~v~Ei~-----~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~A~~Yl~~~~~~~ 700 (969)
.+.+|+||.+....|++.+.+|. ..+|+.|.+..||||||++.||||+|+.++.-.|..|+++.++...+.
T Consensus 730 ~p~qpkLYkV~lGmGyLELPQvel~P~~~l~q~lL~sk~VyiLDc~sDiF~W~GkKs~RLvraAa~KL~~EL~~M~---- 805 (1255)
T KOG0444|consen 730 VPEQPKLYKVNLGMGYLELPQVELLPKGILKQDLLGSKGVYILDCNSDIFLWIGKKSNRLVRAAAQKLVVELHQMI---- 805 (1255)
T ss_pred CCCCcceEEEccccceeecchhhhchhhHHHHHhhcCCeEEEEecCCceEEEecccchHHHHHHHHHHHHHHHhhh----
Confidence 13679999999999999987772 589999999999999999999999999999999999999999999873
Q ss_pred CCCCCCcEEEecCCCCCcccccccc-ccccccc
Q 037000 701 NLPHEVPIYIVLEGSEPPFFTRFFT-WDSAKTN 732 (969)
Q Consensus 701 ~r~~~tpI~vV~qG~EP~~Ft~~F~-Wd~~k~~ 732 (969)
.|+....|+.+.+|.|...|+.-|. ||+....
T Consensus 806 dRPdyA~V~R~~EG~E~q~FrsKFagWDev~~V 838 (1255)
T KOG0444|consen 806 DRPDYAQVYRETEGEESQMFRSKFAGWDEVVPV 838 (1255)
T ss_pred cCcchhheeeccCccHHHHHHHhhCCcceeeee
Confidence 5777788999999999999999999 9987654
No 6
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=1.6e-38 Score=358.33 Aligned_cols=289 Identities=26% Similarity=0.464 Sum_probs=245.3
Q ss_pred cEEEEEEECceeeecCCCCccceecCCEEEEEEeeec---------------CCCCcceEEEEEecCCCChhhHhHHHHH
Q 037000 20 GIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTAS---------------KSGALRHDIHYWLGKDTSQDEAGTAAIK 84 (969)
Q Consensus 20 gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~---------------~~~~~~~~Ih~WlG~~ss~de~g~AA~~ 84 (969)
...+|.|.+|....+| .++|+||++|||||.|.|.. ..|+.++.+|||+|++++..++|+||++
T Consensus 524 s~d~W~i~ef~~~~~~-~~~ghF~s~~~YvvrWky~Is~~Vr~~~~g~~~~r~~Gr~rcvyf~WqG~hst~~ekG~~AL~ 602 (919)
T KOG0445|consen 524 SVDVWHILEFDYSRLP-QSIGHFHSGDAYVVRWKYMISTAVRSRQKGEHSVRAAGRERCVYFFWQGRHSTVSEKGTSALM 602 (919)
T ss_pred cccceeeehhhhhhhh-hhhhccccCceEEEEEEEEeehhhhhhhcCccchhhcccceEEEEEEccccCCcccccceeee
Confidence 5789999999999999 78999999999999999862 2467789999999999999999999999
Q ss_pred HHHHHHHhCCCceEEEeeccCCcHhHHhccCCcEEEecCccCCCCccccccccceEEEEEeecce--EEEEEecCCCCCC
Q 037000 85 TVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHV--IHVKEVPFSRSSL 162 (969)
Q Consensus 85 aveLd~~Lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rL~~vkGkr~--v~~~eV~~s~sSL 162 (969)
++|||+.-| .|+|+.||+||++||++|.|+|+++.|-.+ +..-|||+|+|... ..++||.+..|+|
T Consensus 603 tvElD~e~g---aqvrv~qG~Ep~~Fl~lF~g~m~vhsgr~E---------~~~erlY~v~G~vs~Et~l~Ev~c~~S~L 670 (919)
T KOG0445|consen 603 TVELDEERG---AQVRVLQGKEPPCFLQLFQGGMVVHSGRRE---------EEEERLYCVRGEVSVETNLLEVACHCSSL 670 (919)
T ss_pred eeeeccccC---ceeEeecCCCccHHHHHhcCCeeEEcCchh---------hchhheeeEecccccchhhhHhhhccccc
Confidence 999999876 499999999999999999999999886432 22457999999864 4788999999999
Q ss_pred CcCCcceeecC--CeEEEEeCCCCCHHHHHHHHHHHHHhhcccCC--CceeEEEeeCCccccccchhhHHHHcCCCCCCC
Q 037000 163 NHDDIFILDTQ--SKIFQFNGSNSSIQERAKALEVVQYIKDTYHD--GKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLP 238 (969)
Q Consensus 163 ns~DvFILd~~--~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~--G~~~v~~VdeG~~~~~~e~~eFw~~lGg~~~~~ 238 (969)
.|...+|+..+ ..||+|+|.++-.+.|..+..+|+.|+....+ +++.++.||+|+ ++..||++||-+.
T Consensus 671 RSr~smv~~~~~~~~~~~whg~k~~~ht~~v~v~aa~~~~~q~pgs~~~~~~~Eveegs-----~~~~~~~alGrkd--- 742 (919)
T KOG0445|consen 671 RSRTSMVVLNVNKALIYLWHGCKAQAHTKEVGVTAANKIKEQCPGSSSKVTIHEVEEGS-----EPLGFWDALGRKD--- 742 (919)
T ss_pred cccceEEEEeccccceEEEecccCCcchhhHhHHHHHHHHHhCCCccccceeEeecCCC-----Cchhhhhhccccc---
Confidence 99999999765 47999999999999999999999999877664 556788898885 8899999998642
Q ss_pred CCCCcCccccccccccceEEEEeeCCC-ccc----ccCCCCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHHHHHHHH
Q 037000 239 RKMTISEENNNVVHSHSTKLYSVDKGQ-AVP----VEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAA 313 (969)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~rLy~v~~G~-l~~----~e~~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~~A~~~A 313 (969)
....+|||-.++.+ +.. -...||+|++|.+- |+||.|.++|+|. ...+|+.||++|
T Consensus 743 -------------f~~~~RlF~~sS~qa~els~p~rc~~pFsQ~~Ly~a--fLvD~gdelwLW~----w~s~r~~Aleta 803 (919)
T KOG0445|consen 743 -------------FNFAPRLFILSSSQATELSYPARCPMPFSQEDLYSA--FLVDNGDELWLWQ----WASDRKSALETA 803 (919)
T ss_pred -------------ccccceeeeccchhhhhccCcccCCCcccHHHHhhh--eeeccCCeeEeeh----hhhHHHHHHHHH
Confidence 23567888776222 111 12368999999865 9999999999999 778999999999
Q ss_pred HHHHhcCCCCCceEEEecCCccchhhhcccccCCcCCc
Q 037000 314 EELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETN 351 (969)
Q Consensus 314 ~~~i~~~~rp~t~i~~V~eG~Ep~~FK~~F~~W~~~~~ 351 (969)
.+|++... .+-.+|..|.||..||.+|.+|....+
T Consensus 804 ~~Ywk~~~---~p~~vV~aGlEPl~Fk~lFp~We~red 838 (919)
T KOG0445|consen 804 LQYWKNLK---APSYVVHAGLEPLTFKNLFPSWEHRED 838 (919)
T ss_pred HHHHhccC---CCceEEEcCcChhhhhhhCCCceeccc
Confidence 99999543 346789999999999999999988753
No 7
>PF02209 VHP: Villin headpiece domain; InterPro: IPR003128 Villin is an F-actin bundling protein involved in the maintenance of the microvilli of the absorptive epithelia. The villin-type "headpiece" domain is a modular motif found at the extreme C terminus of larger "core" domains in over 25 cytoskeletal proteins in plants and animals, often in assocation with the Gelsolin repeat. Although the headpiece is classified as an F-actin-binding domain, it has been shown that not all headpiece domains are intrinsically F-actin-binding motifs, surface charge distribution may be an important element for F-actin recognition []. An autonomously folding, 35 residue, thermostable subdomain (HP36) of the full-length 76 amino acid residue villin headpiece, is the smallest known example of a cooperatively folded domain of a naturally occurring protein. The structure of HP36, as determined by NMR spectroscopy, consists of three short helices surrounding a tightly packed hydrophobic core []. ; GO: 0003779 actin binding, 0007010 cytoskeleton organization; PDB: 1ZV6_A 1QZP_A 1UND_A 2PPZ_A 3TJW_B 1YU8_X 2JM0_A 1WY4_A 3MYC_A 1YU5_X ....
Probab=99.68 E-value=1.7e-17 Score=123.31 Aligned_cols=36 Identities=61% Similarity=1.136 Sum_probs=31.8
Q ss_pred CCCHHhHHHHhCCCHHHHhcCchhHHHhhhhhcCCC
Q 037000 934 YLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969 (969)
Q Consensus 934 yLs~~~F~~~f~m~~~~f~~lp~wkq~~~kk~~~Lf 969 (969)
||||+||++||||+|+||++||+|||++|||++|||
T Consensus 1 YLsd~dF~~vFgm~~~eF~~lP~WKq~~lKK~~~LF 36 (36)
T PF02209_consen 1 YLSDEDFEKVFGMSREEFYKLPKWKQNNLKKKAGLF 36 (36)
T ss_dssp GS-HHHHHHHHSS-HHHHHHS-HHHHHHHHHHTTT-
T ss_pred CcCHHHHHHHHCCCHHHHHHChHHHHHHHHHHhCCC
Confidence 899999999999999999999999999999999998
No 8
>smart00153 VHP Villin headpiece domain.
Probab=99.67 E-value=3.4e-17 Score=122.14 Aligned_cols=36 Identities=64% Similarity=1.163 Sum_probs=35.7
Q ss_pred CCCHHhHHHHhCCCHHHHhcCchhHHHhhhhhcCCC
Q 037000 934 YLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969 (969)
Q Consensus 934 yLs~~~F~~~f~m~~~~f~~lp~wkq~~~kk~~~Lf 969 (969)
||||+||++||||||+||++||+|||++|||++|||
T Consensus 1 yLsdeeF~~vfgmsr~eF~~LP~WKq~~lKk~~~LF 36 (36)
T smart00153 1 YLSDEDFEEVFGMTREEFYKLPLWKQNQLKKKLGLF 36 (36)
T ss_pred CCCHHHHHHHHCCCHHHHHhCcHhhHHHHHhhcCCC
Confidence 899999999999999999999999999999999998
No 9
>smart00262 GEL Gelsolin homology domain. Gelsolin/severin/villin homology domain. Calcium-binding and actin-binding. Both intra- and extracellular domains.
Probab=99.66 E-value=3.8e-16 Score=142.90 Aligned_cols=88 Identities=47% Similarity=0.771 Sum_probs=82.5
Q ss_pred EEEEeecceEEEEEecCCCCCCCcCCcceeecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCcccc
Q 037000 141 LFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMA 220 (969)
Q Consensus 141 L~~vkGkr~v~~~eV~~s~sSLns~DvFILd~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~ 220 (969)
+++++|.+.+.+.+|+++.++||++||||||++..||+|+|++|+..||.+|+++|+.+....+.+.+.|.+|+||.
T Consensus 2 ~~~~~g~~~~~~~~~~~~~~~L~s~d~fild~~~~iyvW~G~~as~~ek~~A~~~a~~~~~~~~~~~~~i~~v~eg~--- 78 (90)
T smart00262 2 LVRVKGKRNVRVPEVPFSQGSLNSGDCYILDTGSEIYVWVGKKSSQDEKKKAAELAVELDDTLGPGPVQVRVVDEGK--- 78 (90)
T ss_pred eEEEeCCceEEEEEcCCCHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEEeCCC---
Confidence 68899999999999999999999999999999999999999999999999999999999877766778999999986
Q ss_pred ccchhhHHHHcCC
Q 037000 221 DAEAGEFWGFFGG 233 (969)
Q Consensus 221 ~~e~~eFw~~lGg 233 (969)
|+.+||.+|||
T Consensus 79 --E~~~F~~~f~~ 89 (90)
T smart00262 79 --EPPEFWSLFGG 89 (90)
T ss_pred --CCHHHHHHhCC
Confidence 78899999987
No 10
>smart00262 GEL Gelsolin homology domain. Gelsolin/severin/villin homology domain. Calcium-binding and actin-binding. Both intra- and extracellular domains.
Probab=99.64 E-value=6.2e-16 Score=141.46 Aligned_cols=76 Identities=36% Similarity=0.568 Sum_probs=71.0
Q ss_pred CCCCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEecCCccchhhhcccccC
Q 037000 271 GDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCW 346 (969)
Q Consensus 271 ~~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~~A~~~A~~~i~~~~rp~t~i~~V~eG~Ep~~FK~~F~~W 346 (969)
..++++++|++++|||||++++||||+|++|+..+|..|+..|+.|++..+.|.++|.+|.||.||..|+++|.+|
T Consensus 15 ~~~~~~~~L~s~d~fild~~~~iyvW~G~~as~~ek~~A~~~a~~~~~~~~~~~~~i~~v~eg~E~~~F~~~f~~~ 90 (90)
T smart00262 15 EVPFSQGSLNSGDCYILDTGSEIYVWVGKKSSQDEKKKAAELAVELDDTLGPGPVQVRVVDEGKEPPEFWSLFGGW 90 (90)
T ss_pred EcCCCHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEEeCCCCCHHHHHHhCCC
Confidence 3579999999999999999999999999999999999999999999987653449999999999999999999988
No 11
>KOG1044 consensus Actin-binding LIM Zn-finger protein Limatin involved in axon guidance [Signal transduction mechanisms; Cytoskeleton]
Probab=99.42 E-value=6.8e-14 Score=158.72 Aligned_cols=63 Identities=44% Similarity=0.733 Sum_probs=60.5
Q ss_pred CCccChhhhhccc---CCCCCCCCccccccCCCHHhHHHHhCCCHHHHhcCchhHHHhhhhhcCCC
Q 037000 907 VPIYPYERLKITS---TDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF 969 (969)
Q Consensus 907 ~~~~~~~~l~~~~---~~~p~~vd~~~~e~yLs~~~F~~~f~m~~~~f~~lp~wkq~~~kk~~~Lf 969 (969)
.++|||+.|+.++ .+||++||++++|.||+.|||.+||||+.+||++||.||||+|||++.||
T Consensus 605 ~KiypYe~L~vTnrgr~klp~dVDRtrLERHL~~e~F~eiF~MSi~EF~rL~LWkRnnlKkkAkLF 670 (670)
T KOG1044|consen 605 PKIYPYEMLMVTNRGRNKLPRDVDRTRLERHLSPEDFSEIFGMSISEFDRLPLWKRNNLKKKAKLF 670 (670)
T ss_pred ccccChHHheecccccccCcccchhhHHhhccCHHHHHHHhccCHhhhchhhhhhhhhhhhhhccC
Confidence 4799999998775 78999999999999999999999999999999999999999999999999
No 12
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) []. It can promote nucleation (the assembly of monomers into filaments), as well as sever existing filaments. In addition, this protein binds with high affinity to fibronectin. Plasma gelsolin and cytoplasmic gelsolin are derived from a single gene by alternate initiation sites and differential splicing. Sequence comparisons indicate an evolutionary relationship between gelsolin, villin, fragmin and severin []. Six large repeating segments occur in gelsolin and villin, and 3 similar segments in severin and fragmin. While the multiple repeats have yet to be related to any known function of the actin-severing proteins, the superfamily appears to have evolved from an ancestral sequence of 120 to 130 amino acid residues [].; PDB: 3FG6_F 1RGI_G 2FGH_A 1D0N_B 3EGD_B 2NUP_B 2NUT_B 3EGX_B 1JHW_A 1J72_A ....
Probab=99.33 E-value=1.9e-12 Score=114.24 Aligned_cols=75 Identities=40% Similarity=0.530 Sum_probs=69.2
Q ss_pred eEEEEEecCCCCCCCcCCcceeecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCccccccchhhHH
Q 037000 149 VIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFW 228 (969)
Q Consensus 149 ~v~~~eV~~s~sSLns~DvFILd~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~~~e~~eFw 228 (969)
.+++.++++++++|+++||||||++..||+|.|+.|+..||.+|+.+|+.|...++.+.+.+..+.+|+ |+..||
T Consensus 2 ~~~~~~~~~s~~~L~s~~~yIld~~~~i~vW~G~~~~~~e~~~a~~~a~~~~~~~~~~~~~~~~~~eg~-----E~~~F~ 76 (76)
T PF00626_consen 2 FVRPEQVPLSQSSLNSDDCYILDCGYEIFVWVGKKSSPEEKAFAAQLAQELLSEERPPLPEVIRVEEGK-----EPAEFL 76 (76)
T ss_dssp TEEEEEESSSGGGEETTSEEEEEESSEEEEEEHTTSHHHHHHHHHHHHHHHHHHHTTTTSEEEEEETTH-----HHHHHH
T ss_pred CccCCcCCCCHHHcCCCCEEEEEeCCCcEEEEeccCCHHHHHHHHHHHHHhhhhcCCCCCEEEEecCCC-----CChHHC
Confidence 367788999999999999999999999999999999999999999999999855678889999999996 888987
No 13
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) []. It can promote nucleation (the assembly of monomers into filaments), as well as sever existing filaments. In addition, this protein binds with high affinity to fibronectin. Plasma gelsolin and cytoplasmic gelsolin are derived from a single gene by alternate initiation sites and differential splicing. Sequence comparisons indicate an evolutionary relationship between gelsolin, villin, fragmin and severin []. Six large repeating segments occur in gelsolin and villin, and 3 similar segments in severin and fragmin. While the multiple repeats have yet to be related to any known function of the actin-severing proteins, the superfamily appears to have evolved from an ancestral sequence of 120 to 130 amino acid residues [].; PDB: 3FG6_F 1RGI_G 2FGH_A 1D0N_B 3EGD_B 2NUP_B 2NUT_B 3EGX_B 1JHW_A 1J72_A ....
Probab=99.31 E-value=1.2e-12 Score=115.51 Aligned_cols=71 Identities=42% Similarity=0.763 Sum_probs=63.6
Q ss_pred ccCCCCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCC-ceEEEecCCccchhhh
Q 037000 269 VEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSK-SHMIRVIEGFETVMFK 340 (969)
Q Consensus 269 ~e~~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~~A~~~A~~~i~~~~rp~-t~i~~V~eG~Ep~~FK 340 (969)
.+..++++++|++++|||||+|.+||||+|++++..+|..|+..|+++. ...|+. +.+.++.+|.||..|.
T Consensus 5 ~~~~~~s~~~L~s~~~yIld~~~~i~vW~G~~~~~~e~~~a~~~a~~~~-~~~~~~~~~~~~~~eg~E~~~F~ 76 (76)
T PF00626_consen 5 PEQVPLSQSSLNSDDCYILDCGYEIFVWVGKKSSPEEKAFAAQLAQELL-SEERPPLPEVIRVEEGKEPAEFL 76 (76)
T ss_dssp EEEESSSGGGEETTSEEEEEESSEEEEEEHTTSHHHHHHHHHHHHHHHH-HHHTTTTSEEEEEETTHHHHHHH
T ss_pred CCcCCCCHHHcCCCCEEEEEeCCCcEEEEeccCCHHHHHHHHHHHHHhh-hhcCCCCCEEEEecCCCCChHHC
Confidence 3445799999999999999999999999999999999999999999999 334655 8899999999999983
No 14
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
Probab=96.23 E-value=0.01 Score=71.46 Aligned_cols=118 Identities=21% Similarity=0.307 Sum_probs=77.5
Q ss_pred CCCeeEEEEe---ccC-----eeEEeccccccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHHHH-----------
Q 037000 628 SDPHLFSCTF---SKG-----HLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTI----------- 688 (969)
Q Consensus 628 ~~prLF~~s~---~~G-----~~~v~Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~----------- 688 (969)
..|+||.+.+ +.| .+..-+--|.+-+-|.+..+||||++.+||+|+|+.+++......+.+
T Consensus 708 iYP~lyalHdm~~e~~l~~~~~~~~~~piNaT~s~le~~GlYLidtg~~iflw~g~d~~p~Ll~dlf~~~~~~~I~~~k~ 787 (861)
T COG5028 708 IYPTLYALHDMPIEAGLPDEGLLVLPSPINATSSLLESGGLYLIDTGQKIFLWFGKDAVPSLLQDLFGVDSLSDIPSGKF 787 (861)
T ss_pred hccceeeecccccccCCCcccccccccchhhhHHHHhcCCeEEEEcCCEEEEEecCCCCHHHHHHhcCcchhhhcccccc
Confidence 4689997762 222 222222236788889999999999999999999999987544433322
Q ss_pred ------------HHHHhhccccCCCCCCCCcEEEecCCCCCcccccccc--ccccccccCCchHHHHHHHhhCC
Q 037000 689 ------------GEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFT--WDSAKTNMHGNSFQRKLSIVKNG 748 (969)
Q Consensus 689 ------------A~~Yl~~~~~~~~r~~~tpI~vV~qG~EP~~Ft~~F~--Wd~~k~~~~~~s~~~~~~~~~~~ 748 (969)
+.+-|..-.. ..+....|+++|.+|.+|. .+.||. -=..+..+ ..||.+-|.+|+.+
T Consensus 788 ~~p~~~n~~n~~v~~iI~~lrs-~~~~~tl~lvlVR~~~d~s-~~~~~~s~lVEDk~~n-~~SY~~yL~~lh~k 858 (861)
T COG5028 788 TLPPTGNEFNERVRNIIGELRS-VNDDSTLPLVLVRGGGDPS-LRLWFFSTLVEDKTLN-IPSYLDYLQILHEK 858 (861)
T ss_pred ccCCcCCHHHHHHHHHHHHHHh-hCCCCccceEEEecCCCcc-hhhheehheecccccC-CccHHHHHHHHHHH
Confidence 2222222111 0233456799999999998 566663 44445554 89999999888753
No 15
>PTZ00395 Sec24-related protein; Provisional
Probab=95.62 E-value=0.029 Score=71.72 Aligned_cols=113 Identities=12% Similarity=0.263 Sum_probs=69.3
Q ss_pred CCCeeEEEEec-----------cCeeEEeccccccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHH----------
Q 037000 628 SDPHLFSCTFS-----------KGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHAL---------- 686 (969)
Q Consensus 628 ~~prLF~~s~~-----------~G~~~v~Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al---------- 686 (969)
..||||.+.+- .+.+.+..-.+.+-+-|..+.|||||++..||||||..+++.--+.-+
T Consensus 1403 LYPRLYpLHdL~~e~e~d~~d~d~~ivLPp~LrLS~ErLesdGIYLLDNGe~IyLWVG~~V~PqLLqDLFGv~~~~~~~~ 1482 (1560)
T PTZ00395 1403 VYPVMYVIHIKGKTNEIDSMDVDDDLFIPKTIPSSAEKIYSNGIYLLDACTHFYLYFGFHSDANFAKEIVGDIPTEKNAH 1482 (1560)
T ss_pred hcCceEEcccccccccCCccCCCCccccCCcccchHHHhcCCcEEEEECCCEEEEEECCCCCHHHHHHHcCCCccccccc
Confidence 47999988652 122222233467788899999999999999999999999865432221
Q ss_pred -------------HHHHHHhhccccCCCCCCCCcEEEecCC--CCCccccccccccccccccCCchHHHHHHHhhC
Q 037000 687 -------------TIGEKFIGHDFLLENLPHEVPIYIVLEG--SEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKN 747 (969)
Q Consensus 687 -------------~~A~~Yl~~~~~~~~r~~~tpI~vV~qG--~EP~~Ft~~F~Wd~~k~~~~~~s~~~~~~~~~~ 747 (969)
.-..++|+.. +++.+..|+++|.+| .|+. |..++. +|. .. ...||.+.|..|..
T Consensus 1483 eLPelDT~iS~RVrnII~~LR~~---r~~~~Y~pL~IVRqgDp~E~~-F~s~LV-EDR-s~-g~~SYvDFLc~LHK 1551 (1560)
T PTZ00395 1483 ELNLTDTPNAQKVQRIIKNLSRI---HHFNKYVPLVMVAPKSNEEEH-LISLCV-EDK-AD-KEYSYVNFLCFIHK 1551 (1560)
T ss_pred cccCCCCHHHHHHHHHHHHHHHh---ccCCCcceEEEEeCCCchHHH-HHHhCe-ecC-CC-CCCCHHHHHHHHHH
Confidence 1112223321 112355688888776 4442 222322 343 22 36899998877754
No 16
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.53 E-value=0.052 Score=66.47 Aligned_cols=111 Identities=20% Similarity=0.309 Sum_probs=72.6
Q ss_pred CCCeeEEEEec--cCee--EEeccccccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHH--------------------
Q 037000 628 SDPHLFSCTFS--KGHL--KVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKM-------------------- 683 (969)
Q Consensus 628 ~~prLF~~s~~--~G~~--~v~Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~-------------------- 683 (969)
..|||+-+.+- .-.+ ..-.-...+-+-|..++|||||++..+|||||+.++..-.+
T Consensus 857 ~YPrl~p~hdl~i~dtl~~~~p~~VraS~e~l~negiYll~nG~~~ylwvg~sv~~~llQ~lf~V~s~~~i~s~~~~Lpe 936 (1007)
T KOG1984|consen 857 FYPRLLPFHDLDIEDTLEFVLPKAVRASSEFLSNEGIYLLDNGQKIYLWVGESVDPDLLQDLFSVSSFEQIDSQSGVLPE 936 (1007)
T ss_pred hccceeeeeccccccccccccccceecchhhccCCceEEEecCcEEEEEecCCCCHHHHHHHhcCccccccccccccccc
Confidence 57999877642 2221 11111477888899999999999999999999998753221
Q ss_pred ------HHHHHHHHHhhccccCCCCCCCCcEEEecCCCCCccccccccc-cccccccCCchHHHHHHHh
Q 037000 684 ------HALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTW-DSAKTNMHGNSFQRKLSIV 745 (969)
Q Consensus 684 ------~Al~~A~~Yl~~~~~~~~r~~~tpI~vV~qG~EP~~Ft~~F~W-d~~k~~~~~~s~~~~~~~~ 745 (969)
..+.-+..+|++ -|+...|+++|++|.++-. .-++.- -..... ++.||-..|.++
T Consensus 937 ~dn~lS~k~r~~i~~i~~-----~r~~~l~v~~~k~g~~~~~-~~~~~~lved~~~-~~~sY~dyL~~~ 998 (1007)
T KOG1984|consen 937 LDNPLSRKVRNVISLIRR-----QRSSELPVVLVKQGLDGSE-VEFSEYLVEDRGR-NISSYVDYLCEL 998 (1007)
T ss_pred cCcHHHHHHHHHHHHHHh-----ccccccccEEEecCCCchh-hhhhhhhhccccc-CccccchHHHHH
Confidence 234455667776 2556889999999998886 222221 111222 367777766555
No 17
>PTZ00395 Sec24-related protein; Provisional
Probab=94.14 E-value=0.15 Score=65.53 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=30.5
Q ss_pred CCCcccccCCCcEEEEeCCeEEEEEecCCCCHHH
Q 037000 272 DSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDE 305 (969)
Q Consensus 272 ~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~e 305 (969)
-+++.+-|.+++|||||+|..||+|+|+.++.+-
T Consensus 1434 LrLS~ErLesdGIYLLDNGe~IyLWVG~~V~PqL 1467 (1560)
T PTZ00395 1434 IPSSAEKIYSNGIYLLDACTHFYLYFGFHSDANF 1467 (1560)
T ss_pred ccchHHHhcCCcEEEEECCCEEEEEECCCCCHHH
Confidence 3578899999999999999999999999987654
No 18
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.53 E-value=0.23 Score=61.03 Aligned_cols=66 Identities=20% Similarity=0.416 Sum_probs=51.1
Q ss_pred CCCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHH--------------------------HHHHHHHHHHhcCCCCC-
Q 037000 272 DSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERK--------------------------SASGAAEELLKGSDRSK- 324 (969)
Q Consensus 272 ~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~--------------------------~A~~~A~~~i~~~~rp~- 324 (969)
.+++.+-|..++|||||.|..||+|+|+.++..-.+ ..++.+..+|+. -|+.
T Consensus 881 VraS~e~l~negiYll~nG~~~ylwvg~sv~~~llQ~lf~V~s~~~i~s~~~~Lpe~dn~lS~k~r~~i~~i~~-~r~~~ 959 (1007)
T KOG1984|consen 881 VRASSEFLSNEGIYLLDNGQKIYLWVGESVDPDLLQDLFSVSSFEQIDSQSGVLPELDNPLSRKVRNVISLIRR-QRSSE 959 (1007)
T ss_pred eecchhhccCCceEEEecCcEEEEEecCCCCHHHHHHHhcCccccccccccccccccCcHHHHHHHHHHHHHHh-ccccc
Confidence 358899999999999999999999999988754322 234445566666 5655
Q ss_pred ceEEEecCCccchh
Q 037000 325 SHMIRVIEGFETVM 338 (969)
Q Consensus 325 t~i~~V~eG~Ep~~ 338 (969)
.++..+.+|.++.+
T Consensus 960 l~v~~~k~g~~~~~ 973 (1007)
T KOG1984|consen 960 LPVVLVKQGLDGSE 973 (1007)
T ss_pred cccEEEecCCCchh
Confidence 88998988888876
No 19
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.30 E-value=0.12 Score=63.13 Aligned_cols=115 Identities=20% Similarity=0.290 Sum_probs=72.6
Q ss_pred CCCeeEEEEecc---CeeEEe------ccccccccCCCCCCeEEEecCCeEEEEEcCCCCHH------------------
Q 037000 628 SDPHLFSCTFSK---GHLKVS------EIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSK------------------ 680 (969)
Q Consensus 628 ~~prLF~~s~~~---G~~~v~------Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~------------------ 680 (969)
..|.||++.+-. |....+ ..-+.+-+-|....+||+|||.++|||+|+.|.+.
T Consensus 734 IYP~Lysl~~l~~ea~~~~~d~~~~~p~~L~ltae~l~~~GlyL~D~g~~lfl~vg~~a~P~ll~~vfg~~~~adi~~~~ 813 (887)
T KOG1985|consen 734 IYPTLYSLHDLDDEAGLPIHDQTVVLPPPLNLTAELLSRRGLYLMDTGTTLFLWVGSNADPSLLFDVFGVSTLADIPIGK 813 (887)
T ss_pred hcccceeccccccccCcccccccccCCCccchHHHHhccCceEEEecCcEEEEEEcCCCCccccccccCcchHhhccccc
Confidence 468999886432 222111 23467778899999999999999999999998741
Q ss_pred ----HH-HHHHHHHHHHhhccccCCCCCCCCcE-EEecCCCCCcccccccc--ccccccccCCchHHHHHHHhhC
Q 037000 681 ----SK-MHALTIGEKFIGHDFLLENLPHEVPI-YIVLEGSEPPFFTRFFT--WDSAKTNMHGNSFQRKLSIVKN 747 (969)
Q Consensus 681 ----ek-~~Al~~A~~Yl~~~~~~~~r~~~tpI-~vV~qG~EP~~Ft~~F~--Wd~~k~~~~~~s~~~~~~~~~~ 747 (969)
++ ..-.+-...+|+... ++| .-.|. ++|+++ |-..-+.||. -=+.+..+ .-||-+.|..||.
T Consensus 814 ~~lp~~~n~~s~r~~~fI~~lR--~d~-~~~p~~~ivr~~-~~s~~k~~f~~~lvEDrs~~-~~SY~efLq~lk~ 883 (887)
T KOG1985|consen 814 YTLPELDNEESDRVRRFIKKLR--DDR-TYFPNLYIVRGD-DNSPLKAWFFSRLVEDRSEN-SPSYYEFLQHLKA 883 (887)
T ss_pred ccCcccccchhHHHHHHHHHhh--cCC-cccceEEEEecC-CCchHHHHHHHHHHhhhhcC-cHHHHHHHHHHHH
Confidence 11 112244556666532 233 23454 555555 6666777773 33333332 5789999888875
No 20
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
Probab=92.92 E-value=0.16 Score=61.75 Aligned_cols=65 Identities=20% Similarity=0.439 Sum_probs=48.1
Q ss_pred CCcccccCCCcEEEEeCCeEEEEEecCCCCHHHHHHHHHH-----------------------HHHHHh---cCCCCC-c
Q 037000 273 SLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGA-----------------------AEELLK---GSDRSK-S 325 (969)
Q Consensus 273 ~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~~eR~~A~~~-----------------------A~~~i~---~~~rp~-t 325 (969)
.++.+.|++.++|+||+|.+||+|+|+++.+......+.. +...|. ...+-. .
T Consensus 737 NaT~s~le~~GlYLidtg~~iflw~g~d~~p~Ll~dlf~~~~~~~I~~~k~~~p~~~n~~n~~v~~iI~~lrs~~~~~tl 816 (861)
T COG5028 737 NATSSLLESGGLYLIDTGQKIFLWFGKDAVPSLLQDLFGVDSLSDIPSGKFTLPPTGNEFNERVRNIIGELRSVNDDSTL 816 (861)
T ss_pred hhhHHHHhcCCeEEEEcCCEEEEEecCCCCHHHHHHhcCcchhhhccccccccCCcCCHHHHHHHHHHHHHHhhCCCCcc
Confidence 5889999999999999999999999999987665544432 222222 222322 6
Q ss_pred eEEEecCCccch
Q 037000 326 HMIRVIEGFETV 337 (969)
Q Consensus 326 ~i~~V~eG~Ep~ 337 (969)
+++.|.+|.+|.
T Consensus 817 ~lvlVR~~~d~s 828 (861)
T COG5028 817 PLVLVRGGGDPS 828 (861)
T ss_pred ceEEEecCCCcc
Confidence 688899999988
No 21
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.80 E-value=0.36 Score=59.30 Aligned_cols=32 Identities=34% Similarity=0.730 Sum_probs=28.8
Q ss_pred CCCcccccCCCcEEEEeCCeEEEEEecCCCCH
Q 037000 272 DSLTRDLLETNKCYILDCGIEVFVWMGRNTSL 303 (969)
Q Consensus 272 ~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as~ 303 (969)
-+++-+.|+..+.|++|+|.++|+|+|++|..
T Consensus 763 L~ltae~l~~~GlyL~D~g~~lfl~vg~~a~P 794 (887)
T KOG1985|consen 763 LNLTAELLSRRGLYLMDTGTTLFLWVGSNADP 794 (887)
T ss_pred cchHHHHhccCceEEEecCcEEEEEEcCCCCc
Confidence 35778999999999999999999999999854
No 22
>PLN00162 transport protein sec23; Provisional
Probab=81.28 E-value=3.3 Score=52.50 Aligned_cols=44 Identities=20% Similarity=0.381 Sum_probs=34.8
Q ss_pred CCCeeEEEEeccCeeEEeccccccccCCCCCCeEEEecCCeEEEEEcC
Q 037000 628 SDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQ 675 (969)
Q Consensus 628 ~~prLF~~s~~~G~~~v~Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~ 675 (969)
..|+||..+... ..+-...+.+-|.+|.|+|||++..|+||.|.
T Consensus 619 I~P~L~sy~~~~----~P~pv~Ld~~si~~d~ilLLD~~f~vvi~~G~ 662 (761)
T PLN00162 619 IQPTLISYSFNG----PPEPVLLDVASIAADRILLLDSYFSVVIFHGS 662 (761)
T ss_pred hCCeEEEecCCC----CCcceecchhhccCCceEEEeCCCEEEEEecC
Confidence 589999887532 12224567778999999999999999999995
No 23
>PLN00162 transport protein sec23; Provisional
Probab=73.00 E-value=10 Score=48.27 Aligned_cols=80 Identities=16% Similarity=0.258 Sum_probs=50.2
Q ss_pred ceEEEEee-CCCcccccCCCCcccccCCCcEEEEeCCeEEEEEecCCCC------------HH----HHHHHHHHHHHHH
Q 037000 255 STKLYSVD-KGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTS------------LD----ERKSASGAAEELL 317 (969)
Q Consensus 255 ~~rLy~v~-~G~l~~~e~~~lsq~~L~~~~vyILD~g~eIyVW~Gk~as------------~~----eR~~A~~~A~~~i 317 (969)
.|+||.+. ++...+ ..|+-+-|.++.+||||+|..|+||.|.... .+ .-.+...-|++++
T Consensus 620 ~P~L~sy~~~~~P~p---v~Ld~~si~~d~ilLLD~~f~vvi~~G~~ia~w~~~~~~~~~~~~~~~~~l~~p~~~a~~~~ 696 (761)
T PLN00162 620 QPTLISYSFNGPPEP---VLLDVASIAADRILLLDSYFSVVIFHGSTIAQWRKAGYHNQPEHEAFAQLLEAPQADAQAII 696 (761)
T ss_pred CCeEEEecCCCCCcc---eecchhhccCCceEEEeCCCEEEEEecCcccchhhcCCCCCcchhhHHHHHHhHHHHHHHHH
Confidence 46788776 443222 2477788899999999999999999995321 11 1233444455544
Q ss_pred hcCCC-CCceEEEecCCccchhh
Q 037000 318 KGSDR-SKSHMIRVIEGFETVMF 339 (969)
Q Consensus 318 ~~~~r-p~t~i~~V~eG~Ep~~F 339 (969)
+. | |...+.+..+|+--+-|
T Consensus 697 ~~--Rfp~Pr~i~~~~~~SqaRf 717 (761)
T PLN00162 697 KE--RFPVPRLVVCDQHGSQARF 717 (761)
T ss_pred hc--CCCCCeEEEeCCCCcHHHH
Confidence 33 6 54666666666644443
No 24
>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma. ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....
Probab=51.59 E-value=70 Score=30.77 Aligned_cols=54 Identities=9% Similarity=0.208 Sum_probs=36.0
Q ss_pred cccccCcEEEEEeecC----CCCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCC
Q 037000 415 TKLYSGDCYIFQYSYP----GDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKF 468 (969)
Q Consensus 415 G~FysgdcYIVlytY~----~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g 468 (969)
.+|-..+|.-++|.|. +..+...++-+|.+..++..++..-|..-..|.+.+++
T Consensus 47 ~~l~~~~p~y~~~~~~~~~~~~~~~k~vfI~w~P~~~~vk~km~yas~k~~l~~~l~~ 104 (127)
T PF00241_consen 47 SHLPDDEPRYILYRFEYTHKGSRRSKLVFIYWCPDNAPVKEKMLYASSKASLKKKLGG 104 (127)
T ss_dssp HCSCTTSEEEEEEEEEEEETTSEEEEEEEEEEESTTS-HHHHHHHHHHHHHHHHHCTT
T ss_pred HhcccCCcEEEEEEeeecccCCCCceEEEEEEecCCccHHHhhhhHHhHHHHHHHhCC
Confidence 3455566555555552 34456777889999999999987655555566777877
No 25
>KOG3655 consensus Drebrins and related actin binding proteins [Cytoskeleton]
Probab=49.00 E-value=40 Score=39.76 Aligned_cols=109 Identities=14% Similarity=0.245 Sum_probs=77.0
Q ss_pred ccchhhhcCCccccEEEEEEECc----eeeecCCCCccce---ecCC-----EEEEEEeeecCCCCcceEEEEEecCCCC
Q 037000 7 DLDSAFQGAGQKAGIEIWRIENF----KPVLVPKSSHGKF---FTGD-----SYVILKTTASKSGALRHDIHYWLGKDTS 74 (969)
Q Consensus 7 ~~~~~f~~~g~~~gl~IWrIe~~----~~v~vp~~~~G~F---y~gd-----~YIVL~t~~~~~~~~~~~Ih~WlG~~ss 74 (969)
.++.++.+|-....-..|-|=.+ ....+....+|.| .+.. .|+.+.+....++.-.+.|-.|+|.+++
T Consensus 12 ei~aaY~~v~~d~~dt~WaiF~Yeg~s~~~~~~~s~~~~~~e~~~df~~~kv~yg~~rv~D~~s~l~KfvLI~W~GE~vp 91 (484)
T KOG3655|consen 12 EIRAAYERVVDDSSDTDWALFTYEGNSNDLKVAGSGEGGLEEFLGDFDSGKVMYGFCRVKDPMSGLPKFVLINWIGEGVP 91 (484)
T ss_pred HHHHHHHHhhccCCCceeEEEeecCCccceeeeccccccHHHHhhhcccCceeEEEEEecCcccCCcceEEEEecCCccH
Confidence 46677888766666788988555 3344555555543 2221 4676665544455557888999999999
Q ss_pred hhhHhHHHHHHHHHHHHhCCCceEE--EeeccCCcHhHHhccC
Q 037000 75 QDEAGTAAIKTVELDAALGGRAVQY--REVQGHETEKFLSYFK 115 (969)
Q Consensus 75 ~de~g~AA~~aveLd~~Lgg~~vq~--Re~QG~Es~~Fls~Fk 115 (969)
.-.++.+|.++..+.+.|.|-.|++ |...--+.+.|+.-..
T Consensus 92 ~~Rka~~ath~a~v~~~lkg~hV~i~Ar~e~Dld~d~i~~~ls 134 (484)
T KOG3655|consen 92 VLRKAKCATHKALVKNFLKGFHVEINARSEEDLDEDAIREKLS 134 (484)
T ss_pred HHhhhhhcchHHHHHHHhhcceEEEeccchhhcCHHHHHHHHH
Confidence 9999999999999999999988875 5555556666666554
No 26
>smart00102 ADF Actin depolymerisation factor/cofilin -like domains. Severs actin filaments and binds to actin monomers.
Probab=44.72 E-value=92 Score=30.14 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=49.9
Q ss_pred cccEEEEEEECc-eeeecCCC-C----c----cceec-CCEEEEEEeeec--CCCCcceEEEEEecCCCChhhHhHHHHH
Q 037000 18 KAGIEIWRIENF-KPVLVPKS-S----H----GKFFT-GDSYVILKTTAS--KSGALRHDIHYWLGKDTSQDEAGTAAIK 84 (969)
Q Consensus 18 ~~gl~IWrIe~~-~~v~vp~~-~----~----G~Fy~-gd~YIVL~t~~~--~~~~~~~~Ih~WlG~~ss~de~g~AA~~ 84 (969)
+...-||+|... +.+.|... . + ..|-+ .-+|+|+..-.. .+..-...+-+|++..++.-++...|..
T Consensus 15 ~~~~vi~~i~~~~~~i~v~~~~~~~~~~~el~~~l~~~~~ry~~~~~~~~~~~~~~~k~vfI~w~P~~a~~~~km~yas~ 94 (127)
T smart00102 15 KHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYDYKFTTEESKKSKIVFIFWSPDGAPVKSKMLYASS 94 (127)
T ss_pred CceEEEEEEecCCCEEEEEecCCCCCCHHHHHHhCCccCceEEEEEeecccCCCccccEEEEEECCCCCCHHHHHHHHHH
Confidence 356899999864 22222211 1 1 12333 345888864321 1222346778899999999999888888
Q ss_pred HHHHHHHhCCC
Q 037000 85 TVELDAALGGR 95 (969)
Q Consensus 85 aveLd~~Lgg~ 95 (969)
-..|-..|+|-
T Consensus 95 k~~l~~~l~~~ 105 (127)
T smart00102 95 KDTLKKELGGI 105 (127)
T ss_pred HHHHHHHcCCc
Confidence 88888899873
No 27
>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma. ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....
Probab=43.64 E-value=1e+02 Score=29.67 Aligned_cols=88 Identities=20% Similarity=0.336 Sum_probs=54.7
Q ss_pred ccEEEEEEECc-eeeecCCCC--cc-------ceec-CCEEEEEEee-ecCCCCc-ceEEEEEecCCCChhhHhHHHHHH
Q 037000 19 AGIEIWRIENF-KPVLVPKSS--HG-------KFFT-GDSYVILKTT-ASKSGAL-RHDIHYWLGKDTSQDEAGTAAIKT 85 (969)
Q Consensus 19 ~gl~IWrIe~~-~~v~vp~~~--~G-------~Fy~-gd~YIVL~t~-~~~~~~~-~~~Ih~WlG~~ss~de~g~AA~~a 85 (969)
...-+|.|++. ..+.|.+.. .+ .|=+ .-||+|+.-. ...++.. ...+.+|++..++.-++..-|..-
T Consensus 16 ~~~i~~~i~~~~~~i~v~~~g~~~~~~~el~~~l~~~~p~y~~~~~~~~~~~~~~~k~vfI~w~P~~~~vk~km~yas~k 95 (127)
T PF00241_consen 16 TRWIIFKIDDEKEEIVVEKSGSEGGSFDELLSHLPDDEPRYILYRFEYTHKGSRRSKLVFIYWCPDNAPVKEKMLYASSK 95 (127)
T ss_dssp CSEEEEEEETTSTEEEEEEEEEESSHHHHHHHCSCTTSEEEEEEEEEEEETTSEEEEEEEEEEESTTS-HHHHHHHHHHH
T ss_pred ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhcccCCcEEEEEEeeecccCCCCceEEEEEEecCCccHHHhhhhHHhH
Confidence 55789999987 333333211 11 2333 4478877543 2233322 345668999999999988888888
Q ss_pred HHHHHHhCCCceEEEeeccCCcHh
Q 037000 86 VELDAALGGRAVQYREVQGHETEK 109 (969)
Q Consensus 86 veLd~~Lgg~~vq~Re~QG~Es~~ 109 (969)
..|-..|++ .+.++|.++...
T Consensus 96 ~~l~~~l~~---~~~~~~~~d~~d 116 (127)
T PF00241_consen 96 ASLKKKLGG---IHIEIQASDPDD 116 (127)
T ss_dssp HHHHHHCTT---EEEEEEESSGGG
T ss_pred HHHHHHhCC---ceEEEEECChHH
Confidence 888899988 344666665544
No 28
>PLN03216 actin depolymerizing factor; Provisional
Probab=42.42 E-value=2.3e+02 Score=28.27 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=59.7
Q ss_pred hhhhcC--CccccEEEEEEECce-eeecCCC-Cccceec---------CCEEEEEEe-eecCCCC--cceEEEEEecCCC
Q 037000 10 SAFQGA--GQKAGIEIWRIENFK-PVLVPKS-SHGKFFT---------GDSYVILKT-TASKSGA--LRHDIHYWLGKDT 73 (969)
Q Consensus 10 ~~f~~~--g~~~gl~IWrIe~~~-~v~vp~~-~~G~Fy~---------gd~YIVL~t-~~~~~~~--~~~~Ih~WlG~~s 73 (969)
.+|... ++.....|.+|.+.. .+.|.+. .-|..|+ ..+|+|+.- +....+. ....+.||...++
T Consensus 18 ~~f~~lk~~k~~r~iifkI~~~~~~ivv~~~~~~~~~~~d~~~~L~~~~~rY~vyd~~~~~~~g~~~~klvFI~w~Pd~a 97 (141)
T PLN03216 18 NSFMEMKWKKVHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEAS 97 (141)
T ss_pred HHHHHHHhCCCceEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCCCCCeEEEEEeEeccCCCCcccCEEEEEECCCCC
Confidence 455543 343478999998652 3333321 2233332 345999864 2222232 2456778999999
Q ss_pred ChhhHhHHHHHHHHHHHHhCCCceEEEeeccCCcHh
Q 037000 74 SQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEK 109 (969)
Q Consensus 74 s~de~g~AA~~aveLd~~Lgg~~vq~Re~QG~Es~~ 109 (969)
+.-++-.-|.--.-|-..|+|-. .++|.++...
T Consensus 98 ~vk~KMlYAssK~~lk~~l~gi~---~~iqatd~~e 130 (141)
T PLN03216 98 RIRAKMLYATSKDGLRRVLDGVH---YELQATDPTE 130 (141)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCe---EEEEECChHh
Confidence 99888777777777888898743 4677766544
No 29
>smart00102 ADF Actin depolymerisation factor/cofilin -like domains. Severs actin filaments and binds to actin monomers.
Probab=39.36 E-value=1.1e+02 Score=29.59 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=35.9
Q ss_pred ccccCcEEEEEeecC----CCCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCC
Q 037000 416 KLYSGDCYIFQYSYP----GDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKF 468 (969)
Q Consensus 416 ~FysgdcYIVlytY~----~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g 468 (969)
.|-..+|--++|.|. +..+...++-+|.|..++..++..-|.....+.+.++|
T Consensus 48 ~l~~~~~ry~~~~~~~~~~~~~~~k~vfI~w~P~~a~~~~km~yas~k~~l~~~l~~ 104 (127)
T smart00102 48 ELPEDECRYALYDYKFTTEESKKSKIVFIFWSPDGAPVKSKMLYASSKDTLKKELGG 104 (127)
T ss_pred hCCccCceEEEEEeecccCCCccccEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 355556643455553 23455678889999999999987766666666777775
No 30
>KOG3655 consensus Drebrins and related actin binding proteins [Cytoskeleton]
Probab=32.68 E-value=76 Score=37.58 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=47.1
Q ss_pred CCCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCCCeE--EEeeccCCChHHHhhcC
Q 037000 431 GDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQ--ARIYEGHEPIQFFSIFQ 489 (969)
Q Consensus 431 ~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~~vq--~Rv~QGkEp~~Fl~lF~ 489 (969)
..+...++|-.|+|..+..-.++.|+.++..+.+.|+|-.|+ .|...-=++..|+.-..
T Consensus 74 ~s~l~KfvLI~W~GE~vp~~Rka~~ath~a~v~~~lkg~hV~i~Ar~e~Dld~d~i~~~ls 134 (484)
T KOG3655|consen 74 MSGLPKFVLINWIGEGVPVLRKAKCATHKALVKNFLKGFHVEINARSEEDLDEDAIREKLS 134 (484)
T ss_pred ccCCcceEEEEecCCccHHHhhhhhcchHHHHHHHhhcceEEEeccchhhcCHHHHHHHHH
Confidence 456789999999999999888999999999999999987764 55555666666666554
No 31
>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments.
Probab=32.58 E-value=1.5e+02 Score=28.54 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=56.5
Q ss_pred cchhhhcCCc--cccEEEEEEEC--ceeeecCCCCcc---------ceec-CCEEEEEEeeecC--CCCcceEEEEEecC
Q 037000 8 LDSAFQGAGQ--KAGIEIWRIEN--FKPVLVPKSSHG---------KFFT-GDSYVILKTTASK--SGALRHDIHYWLGK 71 (969)
Q Consensus 8 ~~~~f~~~g~--~~gl~IWrIe~--~~~v~vp~~~~G---------~Fy~-gd~YIVL~t~~~~--~~~~~~~Ih~WlG~ 71 (969)
+-.+|+.+.. +...-|.+|++ ..++... ..-| .|-+ ..||+++...... +......+.+|++.
T Consensus 9 ~~~a~~~~~~~~~~~~vi~~i~~~~~~i~~~~-~~~~~~~~~~l~~~l~~~~~~y~~~~~~~~~~~~~~~k~vfI~w~P~ 87 (132)
T cd00013 9 CKEAFEELKSGKKTRWIIFKIDDDKKEIVVEK-TGEGGESFDEFVEELPEDECRYALYDYDFTTEGSKKSKIVFIYWSPE 87 (132)
T ss_pred HHHHHHHHHhCCceeEEEEEEcCCCCEEEEEe-cCCCCCCHHHHHHhCCcCCceEEEEEecccCCCccccCEEEEEECCC
Confidence 4455665432 34567788876 3333322 1112 2333 3568887653221 22345678899999
Q ss_pred CCChhhHhHHHHHHHHHHHHhCCCceEEEeeccCCcH
Q 037000 72 DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETE 108 (969)
Q Consensus 72 ~ss~de~g~AA~~aveLd~~Lgg~~vq~Re~QG~Es~ 108 (969)
.++.-++..-|..-..|-..|+|- +.+++..+..
T Consensus 88 ~a~~k~km~yas~k~~l~~~l~~~---~~~i~a~~~~ 121 (132)
T cd00013 88 TAPVKSKMLYASSKAALKRELVGI---QVEVQATDPD 121 (132)
T ss_pred CCChhhhhhhHHHHHHHHHhcCCc---eEEEEECChh
Confidence 999988887777777777778764 3345544433
No 32
>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments.
Probab=28.96 E-value=2.8e+02 Score=26.68 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=33.6
Q ss_pred ccccCcEEEEEeecCC----CCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCC
Q 037000 416 KLYSGDCYIFQYSYPG----DEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFL 469 (969)
Q Consensus 416 ~FysgdcYIVlytY~~----~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~ 469 (969)
+|-..+|.-++|.|.. ..+...++.+|.|..++..++..-+..-..+.+.++|-
T Consensus 54 ~l~~~~~~y~~~~~~~~~~~~~~~k~vfI~w~P~~a~~k~km~yas~k~~l~~~l~~~ 111 (132)
T cd00013 54 ELPEDECRYALYDYDFTTEGSKKSKIVFIYWSPETAPVKSKMLYASSKAALKRELVGI 111 (132)
T ss_pred hCCcCCceEEEEEecccCCCccccCEEEEEECCCCCChhhhhhhHHHHHHHHHhcCCc
Confidence 3444555334455532 34567788899999999999875444444555556553
No 33
>COG5014 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=21.68 E-value=80 Score=32.70 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=53.2
Q ss_pred EEEEEEecCCCCeEEEEeccCcCCCCCCCeEEEecCCeEEEEECCCCCHHHHHHHHHHHHHhhccCCCCCCcceEeeccC
Q 037000 522 ALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEG 601 (969)
Q Consensus 522 ~Lf~V~G~~~~~~~a~eV~~~~ssLnS~d~FIL~~~~~vylW~Gk~ss~~er~~A~~va~~l~~~~~~~~~~~~~~v~EG 601 (969)
-+++|.|..+.-. .|--....-|+++..|||.|.+.++= ..|.+++++++.+. +-+.+..-|
T Consensus 93 d~vRiSG~EP~l~--~EHvlevIeLl~~~tFvlETNG~~~g--------~drslv~el~nr~n--------v~vRVsvKG 154 (228)
T COG5014 93 DLVRISGAEPILG--REHVLEVIELLVNNTFVLETNGLMFG--------FDRSLVDELVNRLN--------VLVRVSVKG 154 (228)
T ss_pred cEEEeeCCCcccc--HHHHHHHHHhccCceEEEEeCCeEEe--------cCHHHHHHHhcCCc--------eEEEEEecC
Confidence 3677777644222 12222234578999999999888763 46778887777643 456677789
Q ss_pred CChhHHHHhcCCCCCC
Q 037000 602 AESEQFWELLEGKSEY 617 (969)
Q Consensus 602 ~E~~~FW~~LGgk~~y 617 (969)
-.|++|-+.-|-.++|
T Consensus 155 ~dpesF~kIT~asp~~ 170 (228)
T COG5014 155 WDPESFEKITGASPEY 170 (228)
T ss_pred CCHHHHHHHhcCChHH
Confidence 9999999887766554
No 34
>PF11330 DUF3132: Protein of unknown function (DUF3132); InterPro: IPR021479 This entry is represented by the Citrus psorosis virus, 54kDa protein; it is a family of uncharacterised viral proteins.
Probab=21.61 E-value=71 Score=29.15 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=27.9
Q ss_pred CCeEEEecCCeEEEEEcCCCCHHHHHHHHHHHHHHh
Q 037000 658 EDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFI 693 (969)
Q Consensus 658 ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~A~~Yl 693 (969)
+-|||||..++=-.||-..+=.+.....-+.|.+||
T Consensus 88 evvmildsrdegrmwikddvwaevtehgsksareyc 123 (124)
T PF11330_consen 88 EVVMILDSRDEGRMWIKDDVWAEVTEHGSKSAREYC 123 (124)
T ss_pred cEEEEEeccccCceeeechhHHHHHhhcchhhHhhc
Confidence 468999999999999987665555556667777776
Done!