Query 037002
Match_columns 177
No_of_seqs 157 out of 1388
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 12:33:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037002.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037002hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 1.6E-29 5.4E-34 192.2 11.5 136 19-159 8-150 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 6.3E-28 2.2E-32 185.0 11.9 102 50-159 59-161 (161)
3 3gla_A Low molecular weight he 99.9 3.5E-27 1.2E-31 167.2 13.0 97 46-147 3-99 (100)
4 3aab_A Putative uncharacterize 99.9 5.6E-26 1.9E-30 166.9 10.8 114 20-148 4-118 (123)
5 3l1e_A Alpha-crystallin A chai 99.9 4E-25 1.4E-29 158.7 12.4 99 50-160 5-106 (106)
6 4fei_A Heat shock protein-rela 99.9 2.1E-25 7.1E-30 158.9 10.4 92 47-148 6-97 (102)
7 2klr_A Alpha-crystallin B chai 99.9 3.4E-25 1.2E-29 172.1 11.2 102 50-165 66-168 (175)
8 2wj5_A Heat shock protein beta 99.9 2.3E-24 7.8E-29 153.4 10.7 87 50-148 4-91 (101)
9 3q9p_A Heat shock protein beta 99.9 1.8E-23 6E-28 144.4 11.2 82 52-145 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 9.1E-23 3.1E-27 142.1 11.4 83 54-148 3-86 (90)
11 2bol_A TSP36, small heat shock 99.8 8.8E-21 3E-25 159.2 13.2 90 46-148 97-191 (314)
12 2bol_A TSP36, small heat shock 99.8 3E-21 1E-25 162.0 9.2 82 55-145 231-313 (314)
13 1rl1_A Suppressor of G2 allele 98.9 5E-09 1.7E-13 75.0 8.0 78 50-147 12-89 (114)
14 2xcm_C SGT1-like protein, cyto 98.9 6.9E-09 2.4E-13 71.2 7.5 77 51-147 6-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 97.8 3E-05 1E-09 57.0 5.2 72 52-148 8-84 (134)
16 3eud_A Protein SHQ1; CS domain 97.7 0.00047 1.6E-08 49.2 10.0 72 52-148 22-98 (115)
17 1x5m_A Calcyclin-binding prote 97.5 0.0014 4.7E-08 47.4 11.2 77 51-147 24-104 (127)
18 1wh0_A Ubiquitin carboxyl-term 97.5 0.00081 2.8E-08 49.4 9.0 86 51-147 23-112 (134)
19 3igf_A ALL4481 protein; two-do 97.4 0.00059 2E-08 58.1 8.9 66 55-145 303-369 (374)
20 1wgv_A KIAA1068 protein; CS do 97.3 0.0042 1.4E-07 44.6 11.3 76 51-146 23-101 (124)
21 3qor_A Nuclear migration prote 97.3 0.0016 5.5E-08 46.7 8.6 73 52-147 21-97 (121)
22 1wfi_A Nuclear distribution ge 97.1 0.0012 4.2E-08 47.9 6.6 73 52-147 12-88 (131)
23 2o30_A Nuclear movement protei 97.0 0.0058 2E-07 44.3 9.2 71 52-146 9-80 (131)
24 2rh0_A NUDC domain-containing 96.9 0.0053 1.8E-07 46.1 8.8 72 52-147 18-91 (157)
25 1ejf_A Progesterone receptor P 96.7 0.0077 2.6E-07 43.3 8.1 76 51-147 7-82 (125)
26 2cg9_X CO-chaperone protein SB 95.9 0.0055 1.9E-07 44.7 3.2 74 57-146 23-97 (134)
27 2kmw_A Uncharacterized protein 95.7 0.024 8.3E-07 42.1 6.4 74 51-147 8-82 (150)
28 3q9p_A Heat shock protein beta 80.8 3.3 0.00011 27.1 5.1 33 113-146 8-40 (85)
29 4fei_A Heat shock protein-rela 78.5 3.7 0.00012 27.7 4.9 34 57-91 61-95 (102)
30 3gla_A Low molecular weight he 77.1 4.3 0.00015 27.0 4.9 34 57-91 64-98 (100)
31 3l1e_A Alpha-crystallin A chai 73.4 5.7 0.00019 27.1 4.8 33 58-91 56-90 (106)
32 2y1y_A Alpha-crystallin B chai 73.2 6.3 0.00021 25.9 4.8 33 113-146 7-39 (90)
33 4eld_A MJ16.5-P1, small heat s 70.4 19 0.00063 26.2 7.4 33 114-147 68-100 (161)
34 2wj5_A Heat shock protein beta 68.9 8.7 0.0003 25.8 4.9 33 113-146 12-44 (101)
35 3aab_A Putative uncharacterize 66.9 13 0.00043 25.8 5.5 33 113-146 35-68 (123)
36 1gme_A Heat shock protein 16.9 64.2 9.7 0.00033 27.6 4.6 34 57-91 104-138 (151)
37 2cql_A OK/SW-CL.103, 60S ribos 62.7 7.2 0.00025 26.6 3.4 20 70-90 20-39 (100)
38 2klr_A Alpha-crystallin B chai 58.9 12 0.00042 27.9 4.5 32 59-91 118-151 (175)
39 1rl6_A Protein (ribosomal prot 58.5 25 0.00085 26.4 6.1 46 70-145 11-56 (177)
40 1vq8_E 50S ribosomal protein L 56.9 13 0.00043 28.2 4.2 47 70-145 9-55 (178)
41 1nkw_E 50S ribosomal protein L 53.3 29 0.00098 26.9 5.8 46 70-145 39-84 (212)
42 3j21_F 50S ribosomal protein L 52.1 26 0.0009 26.5 5.3 45 70-143 14-58 (184)
43 2nwt_A UPF0165 protein AF_2212 46.7 14 0.00048 23.6 2.5 15 127-141 3-17 (69)
44 3iz5_F 60S ribosomal protein L 46.1 25 0.00084 26.8 4.3 20 70-90 13-32 (190)
45 3v2d_H 50S ribosomal protein L 41.3 29 0.00099 26.1 4.0 44 70-143 12-55 (180)
46 1ew4_A CYAY protein; friedreic 39.6 34 0.0012 23.4 3.9 29 128-162 29-57 (106)
47 2uwa_A Cellulase; glycoside hy 38.1 39 0.0013 26.9 4.6 45 68-123 30-74 (274)
48 3u5e_H L8, RP24, YL11, 60S rib 37.5 49 0.0017 25.1 4.8 20 70-90 13-32 (191)
49 2zkr_e 60S ribosomal protein L 33.9 61 0.0021 24.6 4.8 20 70-90 13-32 (192)
50 3oeq_A Frataxin homolog, mitoc 33.6 58 0.002 23.0 4.4 28 129-162 49-76 (123)
51 2ks0_A Uncharacterized protein 33.5 26 0.00089 22.4 2.3 24 67-91 17-40 (71)
52 3bbo_I Ribosomal protein L6; l 32.6 19 0.00064 28.2 1.8 47 70-145 54-100 (223)
53 2jn4_A Hypothetical protein FI 32.6 32 0.0011 22.8 2.7 23 134-161 30-52 (87)
54 2o30_A Nuclear movement protei 32.1 94 0.0032 21.5 5.3 32 112-143 14-45 (131)
55 2hyk_A Beta-1,3-glucanase; fam 31.4 46 0.0016 25.6 3.9 48 70-123 49-99 (245)
56 4a17_E RPL9, 60S ribosomal pro 29.3 32 0.0011 26.1 2.5 20 70-90 13-32 (188)
57 4awd_A Beta-porphyranase; hydr 28.1 1.2E+02 0.0041 24.8 6.0 48 69-123 85-145 (324)
58 3h0x_A 78 kDa glucose-regulate 27.4 92 0.0032 22.3 4.7 36 128-166 82-120 (152)
59 3o5s_A Beta-glucanase; glycosy 25.7 96 0.0033 24.0 4.8 44 75-122 63-107 (238)
60 1q5l_A Chaperone protein DNAK; 25.0 1.1E+02 0.0037 21.4 4.6 31 128-161 99-132 (135)
61 3r8s_G 50S ribosomal protein L 24.2 33 0.0011 25.7 1.7 43 70-142 11-53 (176)
62 1nvp_C Transcription initiatio 23.9 31 0.0011 22.4 1.3 15 126-140 46-60 (76)
63 4atf_A Beta-agarase B; hydrola 23.1 1.2E+02 0.0041 24.6 5.1 48 69-122 72-121 (308)
64 2ayh_A 1,3-1,4-beta-D-glucan 4 22.9 1.2E+02 0.004 22.7 4.8 47 70-122 36-83 (214)
65 3d33_A Domain of unknown funct 22.5 1.8E+02 0.006 19.8 5.1 29 129-162 31-60 (108)
66 2op6_A Heat shock 70 kDa prote 22.5 1.3E+02 0.0043 21.2 4.7 33 128-163 82-117 (152)
67 1wgv_A KIAA1068 protein; CS do 22.2 1.6E+02 0.0055 20.0 5.0 32 112-143 29-61 (124)
68 3dqg_A Heat shock 70 kDa prote 22.1 2E+02 0.0069 20.4 5.7 31 128-161 82-115 (151)
69 3dob_A Heat shock 70 kDa prote 21.8 1.4E+02 0.0049 21.3 4.8 32 129-163 85-117 (152)
70 3iln_A Laminarinase; jelly ROW 21.7 1.7E+02 0.0058 22.5 5.6 49 70-123 46-97 (251)
71 2rh0_A NUDC domain-containing 21.3 1.7E+02 0.0057 21.0 5.1 33 111-143 22-54 (157)
72 4ate_A Beta-porphyranase A; hy 20.7 2.5E+02 0.0084 22.0 6.4 49 70-121 55-111 (266)
73 4asm_B Beta-agarase D; hydrola 20.1 1.6E+02 0.0054 24.6 5.2 20 69-91 80-99 (363)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=1.6e-29 Score=192.23 Aligned_cols=136 Identities=41% Similarity=0.622 Sum_probs=106.0
Q ss_pred CCCCccCCCCCChhhhcccccccC-------CCCCccccceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEec
Q 037002 19 PFFDVMFPMTEDPFRVLGQTLLTI-------PKGAEHHQTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKS 91 (177)
Q Consensus 19 ~~fd~~~~~~~~~f~~~~~~~~~~-------~~~~~~~~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~ 91 (177)
++|+.++++|.+||..+......+ +..+.+..+|.+++++|+|.++|||++++||+|++.+++.|+|+|+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~ 87 (151)
T 1gme_A 8 NVFDPFADLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTK 87 (151)
T ss_dssp CCBCTTCGGGSSHHHHHHHHGGGTTSSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCC
T ss_pred cccCchHhhhhchhhhhhhhcccccccccccccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcc
Confidence 566666643337764432100011 1123345679999999999999999999999999954389999999887
Q ss_pred CCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEeccCcccCCCCeEEEEe
Q 037002 92 DDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVPKLVEEKKRQPKVINID 159 (177)
Q Consensus 92 ~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~ 159 (177)
+.+.++..|+++||++|.|.|+|.||.+||.++|+|.|+||+|+|++||.... ..+.+.|+|+
T Consensus 88 ----~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 88 ----EKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp ----CCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred ----ccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 44556789999999999999999999999999999999999999999998765 3345777775
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=6.3e-28 Score=185.01 Aligned_cols=102 Identities=21% Similarity=0.317 Sum_probs=92.8
Q ss_pred cceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEee-ccceEEEEEECCcccccCC
Q 037002 50 QTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAER-PFGKVWRQFRMPMSADLDH 128 (177)
Q Consensus 50 ~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~-~~~~f~r~~~LP~~vd~~~ 128 (177)
.+|.+++++|+|.++||||+++||+|++.+ +.|+|+|+++. ....++..|+++|| .+|.|.|+|.||.+||.++
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~----~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~ 133 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSP----LMITESERIIYSEIPEEEEIYRTIKLPATVKEEN 133 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCC----CCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGG
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcc----cccCCCceEEEEEeeccccEEEEEECCCCccccc
Confidence 579999999999999999999999999999 89999999877 34446678999999 9999999999999999999
Q ss_pred eEEEEeCCEEEEEEeccCcccCCCCeEEEEe
Q 037002 129 VKAHLENGVLRITVPKLVEEKKRQPKVINID 159 (177)
Q Consensus 129 i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~ 159 (177)
|+|+|+||||+|++||.+.. ++++|+|+
T Consensus 134 i~A~~~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 134 ASAKFENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp CEEEEETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred EEEEEECCEEEEEEEcCCCC---CCcEeecC
Confidence 99999999999999998765 46888874
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.95 E-value=3.5e-27 Score=167.20 Aligned_cols=97 Identities=30% Similarity=0.512 Sum_probs=87.5
Q ss_pred CccccceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccc
Q 037002 46 AEHHQTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSAD 125 (177)
Q Consensus 46 ~~~~~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd 125 (177)
+.+..+|.+++++|+|.++||||++++|+|++.+ +.|+|+|++.. +...+...|+++||.+|+|.|+|.||.+||
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~----~~~~~~~~~~~~er~~g~f~r~~~LP~~vd 77 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKS----ESSTETERFSRIERRYGSFHRRFALPDSAD 77 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECC----GGGSSGGGEEEECCCCEEEEEEEECCTTBC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcC----cCccCCccEEEEeecceEEEEEEECCCCcC
Confidence 3344568999999999999999999999999999 89999999987 455567789999999999999999999999
Q ss_pred cCCeEEEEeCCEEEEEEeccCc
Q 037002 126 LDHVKAHLENGVLRITVPKLVE 147 (177)
Q Consensus 126 ~~~i~A~~~~GvL~I~lPK~~~ 147 (177)
.++|+|.|+||+|+|++||.++
T Consensus 78 ~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 78 ADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp TTSCEEEEETTEEEEEEEBC--
T ss_pred hHHeEEEEeCCEEEEEEecCCC
Confidence 9999999999999999999864
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.93 E-value=5.6e-26 Score=166.92 Aligned_cols=114 Identities=21% Similarity=0.210 Sum_probs=88.1
Q ss_pred CCCccCCCCCChhhhcccccccCCCCCccccceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceee
Q 037002 20 FFDVMFPMTEDPFRVLGQTLLTIPKGAEHHQTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEV 99 (177)
Q Consensus 20 ~fd~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~ 99 (177)
++++|.+.|.+.++.+... .. +..+|.+++++|+|.++|||++++||+|++.+++.|+|+|++.. +.
T Consensus 4 ~~~em~~~~~~~~~~~~~~--~~-----P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~----~~-- 70 (123)
T 3aab_A 4 LGKELQKRSEELSRGFYEL--VY-----PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI----TE-- 70 (123)
T ss_dssp ----------CCCHHHHHH--HC-----SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCC----CC--
T ss_pred HHHHHHHHHHHHhhhcccc--CC-----CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec----cC--
Confidence 4555555555555443211 11 23458899999999999999999999999988579999999876 22
Q ss_pred cCceEEEEeeccceEEEEEECCcccccCCe-EEEEeCCEEEEEEeccCcc
Q 037002 100 EGDKWHRAERPFGKVWRQFRMPMSADLDHV-KAHLENGVLRITVPKLVEE 148 (177)
Q Consensus 100 ~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i-~A~~~~GvL~I~lPK~~~~ 148 (177)
+.+|+++||++ +|.|+|.||.+||.++| +|.|+||+|+|++||....
T Consensus 71 -~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 71 -PGVKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp -CSCEEEECSCS-EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred -CCeEEEEEEeE-EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCC
Confidence 67899999999 99999999999999999 9999999999999998754
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=4e-25 Score=158.67 Aligned_cols=99 Identities=19% Similarity=0.407 Sum_probs=85.4
Q ss_pred cceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCe
Q 037002 50 QTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHV 129 (177)
Q Consensus 50 ~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i 129 (177)
.+|.+++++|+|.++||||+++||+|++.+ +.|+|+|++.. ..+...|+++| |.|+|.||.+||.++|
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~------~~~~~~~~~~e-----F~R~~~LP~~vd~~~i 72 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNE------RQDDHGYISRE-----FHRRYRLPSNVDQSAL 72 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE------EETTTEEEEEE-----EEEEEECCTTBCTTSC
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc------ccCCCCEEEEE-----EEEEEECCCCcChhHc
Confidence 358899999999999999999999999999 99999999765 12345676654 9999999999999999
Q ss_pred EEEE-eCCEEEEEEeccCccc--CCCCeEEEEec
Q 037002 130 KAHL-ENGVLRITVPKLVEEK--KRQPKVINIDE 160 (177)
Q Consensus 130 ~A~~-~~GvL~I~lPK~~~~~--~~~~~~I~I~~ 160 (177)
+|.| +||+|+|++||.+... ..++|.|+|+.
T Consensus 73 ~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 73 SCSLSADGMLTFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp EEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred EEEECCCCEEEEEEEccCcccccCCCCeEeeecC
Confidence 9999 9999999999987652 24688999863
No 6
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.92 E-value=2.1e-25 Score=158.94 Aligned_cols=92 Identities=27% Similarity=0.350 Sum_probs=84.0
Q ss_pred ccccceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCccccc
Q 037002 47 EHHQTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADL 126 (177)
Q Consensus 47 ~~~~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~ 126 (177)
.+..+|.+++++|+|.++|||++++||+|++.+ +.|+|+|+++. ..+|+++||++|.|.|+|.||.+||.
T Consensus 6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~~vd~ 75 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPEPVRP 75 (102)
T ss_dssp CCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSSCBCT
T ss_pred cCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCCCcch
Confidence 344568999999999999999999999999999 89999999854 25788899999999999999999999
Q ss_pred CCeEEEEeCCEEEEEEeccCcc
Q 037002 127 DHVKAHLENGVLRITVPKLVEE 148 (177)
Q Consensus 127 ~~i~A~~~~GvL~I~lPK~~~~ 148 (177)
++|+|.|+||+|+|++||..+.
T Consensus 76 ~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 76 ASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp TCCEEEEETTEEEEEEEBSSCC
T ss_pred hHcEEEEECCEEEEEEEccCcc
Confidence 9999999999999999998754
No 7
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.92 E-value=3.4e-25 Score=172.11 Aligned_cols=102 Identities=21% Similarity=0.394 Sum_probs=74.1
Q ss_pred cceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCe
Q 037002 50 QTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHV 129 (177)
Q Consensus 50 ~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i 129 (177)
.++.+++++|+|.++||||+++||+|++.+ +.|+|+|+++. . .++.+|+++| |.|+|.||.+||.++|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~--~~~~~~~~re-----F~R~~~LP~~Vd~~~i 133 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTI 133 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEE----E--EETTEEEEEE-----EEEEEECTTTCCTTTC
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----c--ccCCceEEEE-----EEEEEECCCCcChhHe
Confidence 368899999999999999999999999999 89999999865 2 2345677765 9999999999999999
Q ss_pred EEEE-eCCEEEEEEeccCcccCCCCeEEEEecCCCCC
Q 037002 130 KAHL-ENGVLRITVPKLVEEKKRQPKVINIDEEPGNS 165 (177)
Q Consensus 130 ~A~~-~~GvL~I~lPK~~~~~~~~~~~I~I~~~~~~~ 165 (177)
+|.| +||||+|++||.+.. ...|+|+|+.++..+
T Consensus 134 ~A~~s~dGvL~I~lPK~~~~--~~~r~I~I~~~~~~~ 168 (175)
T 2klr_A 134 TSSLSSDGVLTVNGPRKQVS--GPERTIPITREEKPA 168 (175)
T ss_dssp EEEECTTSCEEEEEECC--------------------
T ss_pred EEEEcCCCEEEEEEECCCCC--CCCeEEEEecCCccc
Confidence 9999 899999999998654 236899998876433
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.91 E-value=2.3e-24 Score=153.41 Aligned_cols=87 Identities=18% Similarity=0.342 Sum_probs=77.7
Q ss_pred cceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCe
Q 037002 50 QTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHV 129 (177)
Q Consensus 50 ~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i 129 (177)
.+|.+++++|+|.++||||+++||+|++.+ +.|+|+|++.. . .++..|+++| |.|+|.||.+||.++|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----F~R~~~LP~~vd~~~i 71 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEE----R--PDEHGFIARE-----FHRRYRLPPGVDPAAV 71 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----C--SSTTCCEEEE-----EEEEEECCTTBCTTCC
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEEE-----EEEEEECCCCcChhHC
Confidence 358889999999999999999999999999 89999999875 2 2345677665 9999999999999999
Q ss_pred EEEE-eCCEEEEEEeccCcc
Q 037002 130 KAHL-ENGVLRITVPKLVEE 148 (177)
Q Consensus 130 ~A~~-~~GvL~I~lPK~~~~ 148 (177)
+|.| +||+|+|++||....
T Consensus 72 ~A~~s~nGvL~I~lPK~~~~ 91 (101)
T 2wj5_A 72 TSALSPEGVLSIQATPASAQ 91 (101)
T ss_dssp EEEECTTSEEEEEECBCCCC
T ss_pred EEEECCCCEEEEEEECCCcC
Confidence 9999 899999999998765
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=1.8e-23 Score=144.39 Aligned_cols=82 Identities=18% Similarity=0.360 Sum_probs=69.7
Q ss_pred eeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEE
Q 037002 52 LALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKA 131 (177)
Q Consensus 52 i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A 131 (177)
+.|++++|+|.++||||+++||+|++.+ +.|+|+|++.. ... + .. ..+|+|.|+|.||.+||.++|+|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~~~-~-~~-----~~~~~F~R~~~LP~~vd~~~i~A 69 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAA----RQD-E-HG-----YISRCFTRKYTLPPGVDPTQVSS 69 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC------------------CCCEEEEEEEECCTTCCGGGCEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----ccC-C-CC-----EEEEEEEEEEECCCCcChHHcEE
Confidence 4579999999999999999999999999 89999999876 221 1 12 24678999999999999999999
Q ss_pred EEe-CCEEEEEEecc
Q 037002 132 HLE-NGVLRITVPKL 145 (177)
Q Consensus 132 ~~~-~GvL~I~lPK~ 145 (177)
.|. ||+|+|++||.
T Consensus 70 ~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 70 SLSPEGTLTVEAPMP 84 (85)
T ss_dssp EECTTSEEEEEEECC
T ss_pred EECCCCEEEEEEEcC
Confidence 997 99999999996
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=9.1e-23 Score=142.15 Aligned_cols=83 Identities=19% Similarity=0.422 Sum_probs=70.4
Q ss_pred eeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEE
Q 037002 54 LTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHL 133 (177)
Q Consensus 54 e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~ 133 (177)
+++++|+|.++||||+++||+|.+.+ +.|+|+|++.. . .++..|+++| |.|+|.||.+||.++|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~ 70 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTITSSM 70 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ECSSSEEEEE-----EEEEEECCTTBCGGGCEEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEEE-----EEEEEECCCCcChhHcEEEE
Confidence 47899999999999999999999999 89999999865 2 2455677665 99999999999999999999
Q ss_pred -eCCEEEEEEeccCcc
Q 037002 134 -ENGVLRITVPKLVEE 148 (177)
Q Consensus 134 -~~GvL~I~lPK~~~~ 148 (177)
+||+|+|++||....
T Consensus 71 ~~~GvL~I~~pK~~~~ 86 (90)
T 2y1y_A 71 SSDGVLTVNGPRKQVS 86 (90)
T ss_dssp CTTSEEEEEECBC---
T ss_pred CCCCEEEEEEEcCCCC
Confidence 899999999998765
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=8.8e-21 Score=159.15 Aligned_cols=90 Identities=17% Similarity=0.229 Sum_probs=79.3
Q ss_pred CccccceeeeCC----eEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECC
Q 037002 46 AEHHQTLALTPT----SHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMP 121 (177)
Q Consensus 46 ~~~~~~i~e~~~----~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP 121 (177)
+.+..++.++++ +|+|.++||||+++||+|++.+ +.|+|+|+++. +. ++ ++.+|+|.|+|.||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~----~~--e~------~r~~g~F~R~~~LP 163 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSV----AC--GD------AAMSESVGRSIPLP 163 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBS----ST--TC------CCBCCCEEEEEECC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEec----cC--CC------CEEEEEEEEEEECC
Confidence 344567999988 9999999999999999999999 99999999876 21 11 17789999999999
Q ss_pred cccccCCeEEEEe-CCEEEEEEeccCcc
Q 037002 122 MSADLDHVKAHLE-NGVLRITVPKLVEE 148 (177)
Q Consensus 122 ~~vd~~~i~A~~~-~GvL~I~lPK~~~~ 148 (177)
.+||.++|+|.|+ ||||+|++||..+.
T Consensus 164 ~~Vd~e~i~A~~~~nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 164 PSVDRNHIQATITTDDVLVIEAPVNEPN 191 (314)
T ss_dssp TTBCGGGCEEEECSSSEEEEEEEBSSCC
T ss_pred CCccccccEEEEeCCCEEEEEEeccCcc
Confidence 9999999999998 99999999998754
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=3e-21 Score=161.97 Aligned_cols=82 Identities=16% Similarity=0.320 Sum_probs=67.1
Q ss_pred eCCeEEEEEEc-CCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEE
Q 037002 55 TPTSHVITLDI-PRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHL 133 (177)
Q Consensus 55 ~~~~y~i~~~l-PG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~ 133 (177)
++++|+|.++| |||+++||+|++.+ +.|+|+|+++. +. ..++++||++|+|.|+|.||++||.++|+|.|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~----~~----~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~ 301 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGK----EE----KTENASHSEHREFYKAFVTPEVVDASKTQAEI 301 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC--------------------CEEEEEEEECSSEECGGGCEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEec----cC----CceEEEEEeeeEEEEEEECCCCcChHHeEEEE
Confidence 45689999999 99999999999999 89999999876 22 15788999999999999999999999999999
Q ss_pred eCCEEEEEEecc
Q 037002 134 ENGVLRITVPKL 145 (177)
Q Consensus 134 ~~GvL~I~lPK~ 145 (177)
+||||+|++||.
T Consensus 302 ~dGvL~i~~Pk~ 313 (314)
T 2bol_A 302 VDGLMVVEAPLF 313 (314)
T ss_dssp ETTEEEEEEEEE
T ss_pred eCCEEEEEEecC
Confidence 999999999996
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.90 E-value=5e-09 Score=74.96 Aligned_cols=78 Identities=18% Similarity=0.143 Sum_probs=68.2
Q ss_pred cceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCe
Q 037002 50 QTLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHV 129 (177)
Q Consensus 50 ~~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i 129 (177)
-+|..+.+.+.|.+.+||+.+++|.|.+.+ +.|.|++.... + ..|...+.|+..|+++..
T Consensus 12 ~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~e~s 71 (114)
T 1rl1_A 12 YDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------G----------EDYNLKLELLHPIIPEQS 71 (114)
T ss_dssp EEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------S----------SEEEEEECBSSCCCGGGE
T ss_pred ccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------C----------cEEEEEeeCCCcCCcccc
Confidence 348889999999999999999999999999 89999987422 1 147778899999999999
Q ss_pred EEEEeCCEEEEEEeccCc
Q 037002 130 KAHLENGVLRITVPKLVE 147 (177)
Q Consensus 130 ~A~~~~GvL~I~lPK~~~ 147 (177)
++.+.+|.|.|+|+|...
T Consensus 72 ~~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 72 TFKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEEECSSSEEEEEECSSC
T ss_pred EEEEECCEEEEEEEcCCC
Confidence 999999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.87 E-value=6.9e-09 Score=71.21 Aligned_cols=77 Identities=19% Similarity=0.133 Sum_probs=67.3
Q ss_pred ceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeE
Q 037002 51 TLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVK 130 (177)
Q Consensus 51 ~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~ 130 (177)
+|..+.+.+.|.+.+||+.++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++..+
T Consensus 6 ~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 6 EYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------E----------DAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp EEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------S----------CCEEECCBBSSCBCGGGCE
T ss_pred cEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------C----------cEEEEeeEcCCccCchhEE
Confidence 47889999999999999999999999999 89999986422 1 1377788999999999999
Q ss_pred EEEeCCEEEEEEeccCc
Q 037002 131 AHLENGVLRITVPKLVE 147 (177)
Q Consensus 131 A~~~~GvL~I~lPK~~~ 147 (177)
+.+.+|.|.|+|+|...
T Consensus 66 ~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 66 YEVLSTKIEICLAKADI 82 (92)
T ss_dssp EEECSSCEEEEEEBSSS
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999753
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.78 E-value=3e-05 Score=57.04 Aligned_cols=72 Identities=14% Similarity=0.259 Sum_probs=61.5
Q ss_pred eeeeCCeEEEEEEcCCCC--CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCccc-ccCC
Q 037002 52 LALTPTSHVITLDIPRMK--KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSA-DLDH 128 (177)
Q Consensus 52 i~e~~~~y~i~~~lPG~~--~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~v-d~~~ 128 (177)
+.-+++..+|.+.+|... .++++|.+++ ..+..... .|.-++.||..| +.+.
T Consensus 8 itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~------------------------PYyLRL~LP~~V~e~~~ 62 (134)
T 2k8q_A 8 ITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS------------------------PYYLRLRFPHELIDDER 62 (134)
T ss_dssp EEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS------------------------SSCEEECCSSCEECCSS
T ss_pred EEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC------------------------CeEEEecCCCeeecCCC
Confidence 444888899999999999 8999999999 78887755 255678999998 8888
Q ss_pred eEEEE--eCCEEEEEEeccCcc
Q 037002 129 VKAHL--ENGVLRITVPKLVEE 148 (177)
Q Consensus 129 i~A~~--~~GvL~I~lPK~~~~ 148 (177)
-+|.| +.|.|+|+|||....
T Consensus 63 ~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 63 STAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp CEEEEETTTTEEEEEEEESSTT
T ss_pred cceeEeccCCEEEEEEeCCCCC
Confidence 99999 699999999997643
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.00047 Score=49.19 Aligned_cols=72 Identities=14% Similarity=0.259 Sum_probs=60.6
Q ss_pred eeeeCCeEEEEEEcCCCC--CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCccc-ccCC
Q 037002 52 LALTPTSHVITLDIPRMK--KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSA-DLDH 128 (177)
Q Consensus 52 i~e~~~~y~i~~~lPG~~--~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~v-d~~~ 128 (177)
+.-+++..+|.+.+|-+. ..++++.+.+ +.+....+ .|.-++.||..| +.+.
T Consensus 22 itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~------------------------PYyLRL~lP~~vved~~ 76 (115)
T 3eud_A 22 ITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS------------------------PYYLRLRFPHELIDDER 76 (115)
T ss_dssp EEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET------------------------TEEEEEECSSCEECSTT
T ss_pred EEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC------------------------CeEEEEecCcceecCCC
Confidence 445888889999999876 8899999999 88888765 367789999987 7777
Q ss_pred eEEEE--eCCEEEEEEeccCcc
Q 037002 129 VKAHL--ENGVLRITVPKLVEE 148 (177)
Q Consensus 129 i~A~~--~~GvL~I~lPK~~~~ 148 (177)
-+|+| ++|.++|++||....
T Consensus 77 ~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 77 STAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp CEEEEETTTTEEEEEEEESSTT
T ss_pred cceEEeCCCcEEEEEEcCCcCC
Confidence 89999 699999999998643
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.55 E-value=0.0014 Score=47.39 Aligned_cols=77 Identities=10% Similarity=0.121 Sum_probs=64.0
Q ss_pred ceeeeCCeEEEEEEcCCC---CCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEE-CCccccc
Q 037002 51 TLALTPTSHVITLDIPRM---KKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFR-MPMSADL 126 (177)
Q Consensus 51 ~i~e~~~~y~i~~~lPG~---~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~-LP~~vd~ 126 (177)
.|.-+.+...|.+.+||+ .+++|.|.+.. +.|.|.+.... +. .|.-.+. |-..|++
T Consensus 24 ~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~---------~~----------~y~~~~~~L~~~I~~ 83 (127)
T 1x5m_A 24 GWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN---------GK----------SYSMIVNNLLKPISV 83 (127)
T ss_dssp EEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS---------SS----------CEEEEEECBSSCCCT
T ss_pred EEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC---------CC----------cEEEEhHHhcCccCc
Confidence 477799999999999999 89999999999 89999875221 11 2555664 8899999
Q ss_pred CCeEEEEeCCEEEEEEeccCc
Q 037002 127 DHVKAHLENGVLRITVPKLVE 147 (177)
Q Consensus 127 ~~i~A~~~~GvL~I~lPK~~~ 147 (177)
++-+..+..+.|.|+|-|...
T Consensus 84 e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 84 EGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp TTCEEEEETTEEEEEEECSSS
T ss_pred ccCEEEEeCCEEEEEEEECCC
Confidence 998999999999999999763
No 18
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.46 E-value=0.00081 Score=49.35 Aligned_cols=86 Identities=12% Similarity=0.140 Sum_probs=65.7
Q ss_pred ceeee-CCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccc---eEEEEEECCccccc
Q 037002 51 TLALT-PTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFG---KVWRQFRMPMSADL 126 (177)
Q Consensus 51 ~i~e~-~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~---~f~r~~~LP~~vd~ 126 (177)
+|+.+ .+...|.+.++|+.++++.|.+.. +.|.|+..... ... -+.| ...| .|.-.+.|-..|++
T Consensus 23 ~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~----~~~---l~~~---~a~g~~~~y~~~~~L~~~I~p 91 (134)
T 1wh0_A 23 DSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRD----GNF---LRLH---PGCGPHTTFRWQVKLRNLIEP 91 (134)
T ss_dssp EEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCC----HHH---HHHS---TTCCTTSCEEEEEEBSSCEEE
T ss_pred EEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCC----Ccc---cccc---cccCcceeEEEeccccccCCc
Confidence 47889 999999999999999999999999 89999876332 000 0000 0001 36667789999999
Q ss_pred CCeEEEEeCCEEEEEEeccCc
Q 037002 127 DHVKAHLENGVLRITVPKLVE 147 (177)
Q Consensus 127 ~~i~A~~~~GvL~I~lPK~~~ 147 (177)
++-+..+..+.|.|+|.|+..
T Consensus 92 e~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 92 EQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEECSSEEEEEEEESSS
T ss_pred hhCEEEEeCCEEEEEEEECCC
Confidence 998888999999999999854
No 19
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.41 E-value=0.00059 Score=58.10 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=55.0
Q ss_pred eCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccC-CeEEEE
Q 037002 55 TPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLD-HVKAHL 133 (177)
Q Consensus 55 ~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~-~i~A~~ 133 (177)
+...|.+++.|||+++++|++.-.+ ..|+|++- .|.|.+.||...-.- -..|.|
T Consensus 303 ~~~~~~~~l~lP~~~~~~~~l~~~g-deL~v~~g------------------------~~rR~i~LP~~L~~~~v~~A~~ 357 (374)
T 3igf_A 303 DTHNRQVRLFLPGFDKKQVKLTQYG-PEVTVEAG------------------------DQRRNIFLPPALSGRPITGAKF 357 (374)
T ss_dssp ETTTTEEEEECTTCCGGGCEEEEET-TEEEEEET------------------------TEEEEEECCTTTTTCCEEEEEE
T ss_pred EeccEEEEEECCCCCHHHeEEEEEC-CeEEEEEC------------------------CEeecccCCHHHcCCCccccEE
Confidence 4448999999999999999999999 79999853 499999999875443 356889
Q ss_pred eCCEEEEEEecc
Q 037002 134 ENGVLRITVPKL 145 (177)
Q Consensus 134 ~~GvL~I~lPK~ 145 (177)
+||.|+|+.-..
T Consensus 358 ~~~~L~i~~~~~ 369 (374)
T 3igf_A 358 QNNYLIISFLEH 369 (374)
T ss_dssp ETTEEEEEECCC
T ss_pred ECCEEEEEEehh
Confidence 999999998643
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.32 E-value=0.0042 Score=44.59 Aligned_cols=76 Identities=17% Similarity=0.269 Sum_probs=61.6
Q ss_pred ceeeeCCeEEEEEEcC-CC-CCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCC
Q 037002 51 TLALTPTSHVITLDIP-RM-KKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDH 128 (177)
Q Consensus 51 ~i~e~~~~y~i~~~lP-G~-~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~ 128 (177)
.|..+.+...|++.|| |+ +.++|.|.+.. +.|.|.+.... +.. +.-...|...|+++.
T Consensus 23 ~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~---------~~~----------~~~~~~L~~~I~~e~ 82 (124)
T 1wgv_A 23 TWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN---------GER----------VLMEGKLTHKINTES 82 (124)
T ss_dssp EEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS---------SEE----------EEEEEEBSSCBCTTT
T ss_pred EEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC---------CCc----------eEEcccccCcCCCcC
Confidence 3778999999999999 88 89999999999 89999875311 111 223457889999999
Q ss_pred eEEEEeCCE-EEEEEeccC
Q 037002 129 VKAHLENGV-LRITVPKLV 146 (177)
Q Consensus 129 i~A~~~~Gv-L~I~lPK~~ 146 (177)
-+..++++. |.|+|-|..
T Consensus 83 S~w~i~~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 83 SLWSLEPGKCVLVNLSKVG 101 (124)
T ss_dssp CEEEECTTSEEEEEECBSS
T ss_pred CEEEEeCCCEEEEEEEECC
Confidence 999998885 999999985
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.27 E-value=0.0016 Score=46.72 Aligned_cols=73 Identities=14% Similarity=0.180 Sum_probs=59.4
Q ss_pred eeeeCCeEEEEEEcCC---CCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCC
Q 037002 52 LALTPTSHVITLDIPR---MKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDH 128 (177)
Q Consensus 52 i~e~~~~y~i~~~lPG---~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~ 128 (177)
|.-+.+...|++.||. ++.++|.|.+.. +.|.|..+... +.-...|...|+++.
T Consensus 21 W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~~----------------------~~~~g~L~~~I~~de 77 (121)
T 3qor_A 21 WTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQP----------------------AIIDGELYNEVKVEE 77 (121)
T ss_dssp EEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTSC----------------------CSEEEEBSSCBCGGG
T ss_pred EEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCcc----------------------eEEeccccccccccc
Confidence 7779999999999994 789999999999 88888654211 112346888999999
Q ss_pred eEEEEeCC-EEEEEEeccCc
Q 037002 129 VKAHLENG-VLRITVPKLVE 147 (177)
Q Consensus 129 i~A~~~~G-vL~I~lPK~~~ 147 (177)
-+..+++| .|.|+|-|...
T Consensus 78 S~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 78 SSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp CEEEEETTTEEEEEEEBSSS
T ss_pred cEEEEcCCCEEEEEEEECCC
Confidence 99999998 99999999753
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.11 E-value=0.0012 Score=47.88 Aligned_cols=73 Identities=15% Similarity=0.203 Sum_probs=59.5
Q ss_pred eeeeCCeEEEEEEcC-C--CCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCC
Q 037002 52 LALTPTSHVITLDIP-R--MKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDH 128 (177)
Q Consensus 52 i~e~~~~y~i~~~lP-G--~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~ 128 (177)
|.-+.+...|.+.|| | ++.++|.|.+.. +.|.|..+... ..-...|...|+++.
T Consensus 12 W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~~----------------------~~~~~~L~~~I~~e~ 68 (131)
T 1wfi_A 12 WTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQP----------------------PVVDGELYNEVKVEE 68 (131)
T ss_dssp EEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTSC----------------------CSBCSCBSSCBCSTT
T ss_pred EEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCce----------------------EEEeccccccccccc
Confidence 777999999999999 6 899999999999 89999864211 001225778899999
Q ss_pred eEEEEeCC-EEEEEEeccCc
Q 037002 129 VKAHLENG-VLRITVPKLVE 147 (177)
Q Consensus 129 i~A~~~~G-vL~I~lPK~~~ 147 (177)
-+..+++| .|.|+|-|...
T Consensus 69 s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 69 SSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp CEEEEETTTEEEEEEEBSSS
T ss_pred CEEEEcCCCEEEEEEEECCC
Confidence 99999998 89999999864
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.97 E-value=0.0058 Score=44.31 Aligned_cols=71 Identities=13% Similarity=0.116 Sum_probs=57.4
Q ss_pred eeeeCCeEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeE
Q 037002 52 LALTPTSHVITLDIP-RMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVK 130 (177)
Q Consensus 52 i~e~~~~y~i~~~lP-G~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~ 130 (177)
|.-+.+...|.+.|| |++.++|.|.+.. +.|.|.+. . . .+ | ...|...|+++.-+
T Consensus 9 W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--g-----~-----~~---------~--~~~L~~~I~~e~S~ 64 (131)
T 2o30_A 9 WDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--G-----E-----IV---------I--DGELLHEVDVSSLW 64 (131)
T ss_dssp EEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--T-----E-----EE---------E--EEEBSSCEEEEEEE
T ss_pred EEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--C-----E-----ee---------E--ccccccccccccCE
Confidence 777999999999996 8999999999999 89999863 1 0 01 2 34688899999989
Q ss_pred EEEeCCEEEEEEeccC
Q 037002 131 AHLENGVLRITVPKLV 146 (177)
Q Consensus 131 A~~~~GvL~I~lPK~~ 146 (177)
..+.+|-|.|+|-|..
T Consensus 65 w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 65 WVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEETTEEEEEEEESS
T ss_pred EEEeCCEEEEEEEECC
Confidence 9999999999999983
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.92 E-value=0.0053 Score=46.06 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=59.7
Q ss_pred eeeeCCeEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeE
Q 037002 52 LALTPTSHVITLDIP-RMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVK 130 (177)
Q Consensus 52 i~e~~~~y~i~~~lP-G~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~ 130 (177)
|.-+.+...|++.|| |++.++|.|.+.. +.|.|.++ . . . + -...|...|+++.-+
T Consensus 18 W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--g-----~-----~----------~-l~g~L~~~I~~eeS~ 73 (157)
T 2rh0_A 18 WYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--G-----R-----E----------I-LKGKLFDSTIADEGT 73 (157)
T ss_dssp EEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--T-----E-----E----------E-EEEEBSSCBCGGGCE
T ss_pred EEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--C-----E-----E----------E-EeeccccccCccccE
Confidence 777999999999998 8999999999999 89999764 1 0 1 1 234688899999999
Q ss_pred EEEeCCE-EEEEEeccCc
Q 037002 131 AHLENGV-LRITVPKLVE 147 (177)
Q Consensus 131 A~~~~Gv-L~I~lPK~~~ 147 (177)
..++++- |.|+|-|...
T Consensus 74 w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 74 WTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EEEECCCEEEEEEEBSSC
T ss_pred EEEcCCcEEEEEEEEcCC
Confidence 9998885 9999999864
No 25
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.72 E-value=0.0077 Score=43.27 Aligned_cols=76 Identities=13% Similarity=0.028 Sum_probs=62.0
Q ss_pred ceeeeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeE
Q 037002 51 TLALTPTSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVK 130 (177)
Q Consensus 51 ~i~e~~~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~ 130 (177)
.|+-+.+...|++.+|+. +++.|.+.. +.|.+++.... ++. .|.-.+.|-..|+++.-+
T Consensus 7 ~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~--------~~~----------~y~~~l~L~~~I~~e~S~ 65 (125)
T 1ejf_A 7 KWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS--------DNF----------KHLNEIDLFHCIDPNDSK 65 (125)
T ss_dssp EEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETT--------TTE----------EEEEEEEBSSCEEEEEEE
T ss_pred eEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCC--------CCc----------eEEEEEEccceeccccCE
Confidence 377799999999999995 799999999 89999887422 111 256677898999999989
Q ss_pred EEEeCCEEEEEEeccCc
Q 037002 131 AHLENGVLRITVPKLVE 147 (177)
Q Consensus 131 A~~~~GvL~I~lPK~~~ 147 (177)
..+.+..|.|+|.|+..
T Consensus 66 ~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 66 HKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEECSSCEEEEEEESST
T ss_pred EEECCCEEEEEEEECCC
Confidence 99988999999999853
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=95.87 E-value=0.0055 Score=44.73 Aligned_cols=74 Identities=11% Similarity=0.094 Sum_probs=54.5
Q ss_pred CeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCC
Q 037002 57 TSHVITLDIPRMKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENG 136 (177)
Q Consensus 57 ~~y~i~~~lPG~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~G 136 (177)
+...|++.+|++. ++.|.+.. +.|.+++.... ....... ..|.-.+.|...|+++.-+..+.++
T Consensus 23 ~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~----~~g~~~~---------~~y~~~l~L~~~Idpe~S~~~v~~~ 86 (134)
T 2cg9_X 23 NYVLITVSIADCD--APELTIKP-SYIELKAQSKP----HVGDENV---------HHYQLHIDLYKEIIPEKTMHKVANG 86 (134)
T ss_dssp SEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC-----------C---------EEBCEEEECSSCCCSSSEEEEECCC
T ss_pred CEEEEEEEecCCC--ceEEEEEC-CEEEEEEeccc----ccCCccC---------ceEEEEEEChhhccccccEEEECCC
Confidence 4489999999974 89999999 89999876421 0000000 1255667899999999999999988
Q ss_pred E-EEEEEeccC
Q 037002 137 V-LRITVPKLV 146 (177)
Q Consensus 137 v-L~I~lPK~~ 146 (177)
. |.|+|.|+.
T Consensus 87 ~~vei~L~K~~ 97 (134)
T 2cg9_X 87 QHYFLKLYKKD 97 (134)
T ss_dssp --CEEEEEECS
T ss_pred EEEEEEEEECC
Confidence 8 999999986
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=95.73 E-value=0.024 Score=42.10 Aligned_cols=74 Identities=11% Similarity=0.146 Sum_probs=59.4
Q ss_pred ceeeeCCeEEEEEEcCCCCCCCeEEEEe-cCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCe
Q 037002 51 TLALTPTSHVITLDIPRMKKDDAKIAVE-ENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHV 129 (177)
Q Consensus 51 ~i~e~~~~y~i~~~lPG~~~edI~V~~~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i 129 (177)
.|+-+.+...|++.++++ +++.|.+. . +.|.+++. .. ++. .|.-.+.|=..|+++ -
T Consensus 8 ~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~--------~~~----------~y~~~l~L~~~Idpe-S 64 (150)
T 2kmw_A 8 LWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA--------QGE----------RFEFSLELYGKIMTE-Y 64 (150)
T ss_dssp EEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT--------TTE----------EEEEEEEBSSCEEEE-E
T ss_pred EEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC--------CCc----------eEEEEeEhhhccccc-c
Confidence 377799999999999997 58999999 7 89999987 21 111 255667888889999 8
Q ss_pred EEEEeCCEEEEEEeccCc
Q 037002 130 KAHLENGVLRITVPKLVE 147 (177)
Q Consensus 130 ~A~~~~GvL~I~lPK~~~ 147 (177)
+..+...-+.|+|.|+..
T Consensus 65 ~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 65 RKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEESSSEEEEEEECCS
T ss_pred eEEecCCEEEEEEEECCC
Confidence 888888889999999764
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=80.83 E-value=3.3 Score=27.08 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.7
Q ss_pred eEEEEEECCcccccCCeEEEEeCCEEEEEEeccC
Q 037002 113 KVWRQFRMPMSADLDHVKAHLENGVLRITVPKLV 146 (177)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~ 146 (177)
.|.-.+.|| +++.+.|+-.+.+|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 477788998 799999999999999999987654
No 29
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=78.51 E-value=3.7 Score=27.72 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=29.6
Q ss_pred CeEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEec
Q 037002 57 TSHVITLDIP-RMKKDDAKIAVEENRVLRVSGERKS 91 (177)
Q Consensus 57 ~~y~i~~~lP-G~~~edI~V~~~~~~~L~I~g~~~~ 91 (177)
+.|.-.+.|| +++.+.|+-.+.+ |+|+|+..+..
T Consensus 61 g~f~R~~~LP~~vd~~~i~A~~~~-GvL~I~lpK~~ 95 (102)
T 4fei_A 61 GRFVRELAFPEPVRPASGVASLAG-GVLTVRFEKLR 95 (102)
T ss_dssp EEEEEEEECSSCBCTTCCEEEEET-TEEEEEEEBSS
T ss_pred cEEEEEEECCCCcchhHcEEEEEC-CEEEEEEEccC
Confidence 3577788999 5899999999998 99999998865
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=77.07 E-value=4.3 Score=27.04 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=29.1
Q ss_pred CeEEEEEEcCC-CCCCCeEEEEecCcEEEEEEEEec
Q 037002 57 TSHVITLDIPR-MKKDDAKIAVEENRVLRVSGERKS 91 (177)
Q Consensus 57 ~~y~i~~~lPG-~~~edI~V~~~~~~~L~I~g~~~~ 91 (177)
+.|.-.+.||. ++.+.|+-.+.+ |+|+|+..+..
T Consensus 64 g~f~r~~~LP~~vd~~~i~A~~~~-GvL~I~~pK~~ 98 (100)
T 3gla_A 64 GSFHRRFALPDSADADGITAAGRN-GVLEIRIPKRP 98 (100)
T ss_dssp EEEEEEEECCTTBCTTSCEEEEET-TEEEEEEEBC-
T ss_pred eEEEEEEECCCCcChHHeEEEEeC-CEEEEEEecCC
Confidence 46888999996 899999999999 99999988754
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=73.41 E-value=5.7 Score=27.06 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=29.3
Q ss_pred eEEEEEEcC-CCCCCCeEEEE-ecCcEEEEEEEEec
Q 037002 58 SHVITLDIP-RMKKDDAKIAV-EENRVLRVSGERKS 91 (177)
Q Consensus 58 ~y~i~~~lP-G~~~edI~V~~-~~~~~L~I~g~~~~ 91 (177)
.|.=.+.|| +++.+.|+-.+ .+ |+|+|+..+..
T Consensus 56 eF~R~~~LP~~vd~~~i~A~~s~~-GvL~I~~PK~~ 90 (106)
T 3l1e_A 56 EFHRRYRLPSNVDQSALSCSLSAD-GMLTFSGPKIP 90 (106)
T ss_dssp EEEEEEECCTTBCTTSCEEEECTT-SEEEEEEEBCC
T ss_pred EEEEEEECCCCcChhHcEEEECCC-CEEEEEEEccC
Confidence 378889999 78999999999 67 99999999876
No 32
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=73.19 E-value=6.3 Score=25.89 Aligned_cols=33 Identities=6% Similarity=0.066 Sum_probs=28.7
Q ss_pred eEEEEEECCcccccCCeEEEEeCCEEEEEEeccC
Q 037002 113 KVWRQFRMPMSADLDHVKAHLENGVLRITVPKLV 146 (177)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~ 146 (177)
.|.-.+.|| +++.+.|+-.+.+|.|+|+.-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477788999 899999999999999999987653
No 33
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=70.43 E-value=19 Score=26.20 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=28.3
Q ss_pred EEEEEECCcccccCCeEEEEeCCEEEEEEeccCc
Q 037002 114 VWRQFRMPMSADLDHVKAHLENGVLRITVPKLVE 147 (177)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~~ 147 (177)
|.-.+.|| +++.+.|+-.+.+|.|+|+.-+...
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 66677898 7999999999999999999887653
No 34
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=68.88 E-value=8.7 Score=25.82 Aligned_cols=33 Identities=0% Similarity=-0.048 Sum_probs=28.5
Q ss_pred eEEEEEECCcccccCCeEEEEeCCEEEEEEeccC
Q 037002 113 KVWRQFRMPMSADLDHVKAHLENGVLRITVPKLV 146 (177)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~~ 146 (177)
.|.-.+.|| +++.+.|+-.+.+|.|+|+.-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 366788999 899999999999999999987753
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=66.93 E-value=13 Score=25.80 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=28.8
Q ss_pred eEEEEEECCcccccCCeEEEEeC-CEEEEEEeccC
Q 037002 113 KVWRQFRMPMSADLDHVKAHLEN-GVLRITVPKLV 146 (177)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~-GvL~I~lPK~~ 146 (177)
.|.-.+.|| +++.+.|+-.+.+ |.|+|+.-+..
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEec
Confidence 467778899 7999999999999 99999998765
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=64.25 E-value=9.7 Score=27.60 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=29.1
Q ss_pred CeEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEec
Q 037002 57 TSHVITLDIP-RMKKDDAKIAVEENRVLRVSGERKS 91 (177)
Q Consensus 57 ~~y~i~~~lP-G~~~edI~V~~~~~~~L~I~g~~~~ 91 (177)
+.|.-.+.|| +++.+.|+-.+.+ |+|+|+..+..
T Consensus 104 g~F~R~~~LP~~vd~~~i~A~~~n-GvL~I~lPK~~ 138 (151)
T 1gme_A 104 GKFVRRFRLLEDAKVEEVKAGLEN-GVLTVTVPKAE 138 (151)
T ss_dssp CCEEEEEECSSCCCGGGCEEEEET-TEEEEEEECCC
T ss_pred cEEEEEEECCCCccccceEEEEEC-CEEEEEEEccC
Confidence 3577788998 6899999999998 99999998765
No 37
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=62.74 E-value=7.2 Score=26.60 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=16.8
Q ss_pred CCCeEEEEecCcEEEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERK 90 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~ 90 (177)
|+.|+|++++ +.++|+|.+-
T Consensus 20 P~gV~V~i~~-~~VtVKGPkG 39 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPRG 39 (100)
T ss_dssp CSSCEEEEET-TEEEEEETTE
T ss_pred CCCCEEEEeC-CEEEEECCCc
Confidence 4788999999 8999999853
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=58.94 E-value=12 Score=27.93 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=27.1
Q ss_pred EEEEEEcC-CCCCCCeEEEE-ecCcEEEEEEEEec
Q 037002 59 HVITLDIP-RMKKDDAKIAV-EENRVLRVSGERKS 91 (177)
Q Consensus 59 y~i~~~lP-G~~~edI~V~~-~~~~~L~I~g~~~~ 91 (177)
|.=.+.|| +++.+.|+-.+ .+ |+|+|+..+..
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~d-GvL~I~lPK~~ 151 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSD-GVLTVNGPRKQ 151 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTT-SCEEEEEECC-
T ss_pred EEEEEECCCCcChhHeEEEEcCC-CEEEEEEECCC
Confidence 66778898 79999999999 57 99999999755
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=58.48 E-value=25 Score=26.41 Aligned_cols=46 Identities=20% Similarity=0.342 Sum_probs=32.7
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEecc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVPKL 145 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 145 (177)
|+.|+|++++ +.++|+|.+-. ..+.| +.. |....+++.|.|+.+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpkG~----------------------L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPKGE----------------------LTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 4788999999 89999998533 44444 443 44557899998886654
No 40
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=56.87 E-value=13 Score=28.16 Aligned_cols=47 Identities=15% Similarity=0.209 Sum_probs=32.8
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEecc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVPKL 145 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 145 (177)
|+.|+|++++ +.++|+|.+-. ..+.|. +.. ++..+++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpkG~----------------------L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDNGS----------------------VTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4789999999 89999998533 444442 333 44557899998886654
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=53.34 E-value=29 Score=26.95 Aligned_cols=46 Identities=11% Similarity=0.256 Sum_probs=32.1
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEecc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVPKL 145 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 145 (177)
|+.|+|++++ +.++|+|.+-. ..+.| +.. |....++|.|.|+.+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG~----------------------L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKGE----------------------LTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCEE----------------------EEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 4788999999 89999998533 44433 433 44456888888876654
No 42
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=52.10 E-value=26 Score=26.47 Aligned_cols=45 Identities=22% Similarity=0.391 Sum_probs=30.7
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVP 143 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 143 (177)
|+.|+|++++ +.++|+|.+-. ..+.|+-| . ++..++++.|.|..+
T Consensus 14 P~gV~v~i~~-~~V~VkGpkG~----------------------L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPKGE----------------------LEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSSCE----------------------EEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCCeE----------------------EEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4889999988 89999988533 44444322 2 344578888888754
No 43
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=46.68 E-value=14 Score=23.59 Aligned_cols=15 Identities=33% Similarity=0.472 Sum_probs=12.3
Q ss_pred CCeEEEEeCCEEEEE
Q 037002 127 DHVKAHLENGVLRIT 141 (177)
Q Consensus 127 ~~i~A~~~~GvL~I~ 141 (177)
..|.|.|+||||+-.
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 458999999999743
No 44
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=46.14 E-value=25 Score=26.77 Aligned_cols=20 Identities=25% Similarity=0.496 Sum_probs=17.1
Q ss_pred CCCeEEEEecCcEEEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERK 90 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~ 90 (177)
|+.|+|++.+ +.++|+|.+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG 32 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPRG 32 (190)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCCEEEEeC-CEEEEECCCc
Confidence 5889999999 8999999853
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=41.31 E-value=29 Score=26.10 Aligned_cols=44 Identities=18% Similarity=0.365 Sum_probs=31.2
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVP 143 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 143 (177)
|+.|+|++.+ +.++|+|.+-. ..+. |+.. |...++++.|.|..+
T Consensus 12 P~gV~v~i~~-~~v~VkGpkG~----------------------L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPKGE----------------------LEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSSCE----------------------EEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCCcE----------------------EEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 5789999999 89999988533 4444 4433 344578999888754
No 46
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=39.57 E-value=34 Score=23.38 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=20.2
Q ss_pred CeEEEEeCCEEEEEEeccCcccCCCCeEEEEecCC
Q 037002 128 HVKAHLENGVLRITVPKLVEEKKRQPKVINIDEEP 162 (177)
Q Consensus 128 ~i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~~~~ 162 (177)
.+.+.+.+|||+|+++... .-+|.-|.+.
T Consensus 29 d~D~e~~~gVLti~f~~~~------~~VINkQ~P~ 57 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENGS------KIIINRQEPL 57 (106)
T ss_dssp CCEEEEETTEEEEECTTSC------EEEEEEETTT
T ss_pred CEeeeccCCEEEEEECCCC------EEEEeCCchh
Confidence 3778899999999998443 2455555443
No 47
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=38.12 E-value=39 Score=26.88 Aligned_cols=45 Identities=7% Similarity=0.014 Sum_probs=29.0
Q ss_pred CCCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcc
Q 037002 68 MKKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMS 123 (177)
Q Consensus 68 ~~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~ 123 (177)
+.++++.| .+ |.|+|++.+.. ...-..+....+|.|+-+++||..
T Consensus 30 w~~~Nv~v--~~-G~L~L~~~k~t--------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 30 WGPQHQRV--DQ-GSLTIWLDSTS--------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp ECGGGEEE--ET-TEEEEEECSSC--------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCCEEE--EC-CEEEEEEecCC--------CCEEEECceEeeEEEEEEEEeCCC
Confidence 35667766 56 78999876432 111111344578999999999964
No 48
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=37.53 E-value=49 Score=25.10 Aligned_cols=20 Identities=20% Similarity=0.592 Sum_probs=17.3
Q ss_pred CCCeEEEEecCcEEEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERK 90 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~ 90 (177)
|+.|+|++.+ +.++|+|.+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG 32 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPRG 32 (191)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCcEEEEeC-CEEEEEcCCe
Confidence 5889999999 8999999853
No 49
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=33.91 E-value=61 Score=24.56 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=16.8
Q ss_pred CCCeEEEEecCcEEEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERK 90 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~ 90 (177)
|+.|+|++.+ +.++|+|.+-
T Consensus 13 P~gV~V~i~~-~~VtVkGpkG 32 (192)
T 2zkr_e 13 PENVDITLKG-RTVIVKGPRG 32 (192)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCCEEEEeC-CEEEEECCCe
Confidence 5788999998 8999998853
No 50
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=33.63 E-value=58 Score=22.97 Aligned_cols=28 Identities=25% Similarity=0.418 Sum_probs=19.7
Q ss_pred eEEEEeCCEEEEEEeccCcccCCCCeEEEEecCC
Q 037002 129 VKAHLENGVLRITVPKLVEEKKRQPKVINIDEEP 162 (177)
Q Consensus 129 i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~~~~ 162 (177)
+-+.+.+|||+|+++... .-+|+-|...
T Consensus 49 ~Dve~~~gVLti~f~~~~------~~VINkQ~P~ 76 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPAFG------TYVINKQPPN 76 (123)
T ss_dssp CEEEECSSEEEEECTTTC------CEEEECCCSS
T ss_pred eEEEccCCEEEEEECCCC------EEEEeCCChh
Confidence 678899999999998542 3455555443
No 51
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=33.53 E-value=26 Score=22.36 Aligned_cols=24 Identities=17% Similarity=0.335 Sum_probs=20.1
Q ss_pred CCCCCCeEEEEecCcEEEEEEEEec
Q 037002 67 RMKKDDAKIAVEENRVLRVSGERKS 91 (177)
Q Consensus 67 G~~~edI~V~~~~~~~L~I~g~~~~ 91 (177)
-|+.+.|.+...- |.|.|+|+.=.
T Consensus 17 sFd~e~i~L~T~~-G~L~IkG~~L~ 40 (71)
T 2ks0_A 17 SFDPKEILLETIQ-GVLSIKGEKLG 40 (71)
T ss_dssp EECSSEEEEEETT-EEEEEEEECCC
T ss_pred EECCCEEEEEeCc-eEEEEEcCCcE
Confidence 3688899999998 99999999643
No 52
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=32.62 E-value=19 Score=28.20 Aligned_cols=47 Identities=26% Similarity=0.346 Sum_probs=31.9
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEEecc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITVPKL 145 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lPK~ 145 (177)
|+.|+|++++ +.++|+|.+-. ..+. |+..++.. ..++|.|.|..+..
T Consensus 54 P~gV~V~i~~-~~VtVKGPkG~----------------------L~~~--~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPLGE----------------------LALT--YPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESS-SEEEECCSSCC----------------------EEEE--CCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEE--cCCCEEEE----EecCCEEEEEcCCC
Confidence 4788899988 89999998543 4433 45444331 45788888876653
No 53
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=32.62 E-value=32 Score=22.84 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=17.0
Q ss_pred eCCEEEEEEeccCcccCCCCeEEEEecC
Q 037002 134 ENGVLRITVPKLVEEKKRQPKVINIDEE 161 (177)
Q Consensus 134 ~~GvL~I~lPK~~~~~~~~~~~I~I~~~ 161 (177)
.+| |++.+||+.-+ ..++.++..
T Consensus 30 ~~G-Ls~YVpKKDLE----E~VVs~E~~ 52 (87)
T 2jn4_A 30 ATG-HSAYVAKKDLE----ELIVEMENP 52 (87)
T ss_dssp SSC-EEEEETTTTEE----EEEEEESSS
T ss_pred CCc-eEEEEeCCcch----hheeeeecc
Confidence 456 99999999876 457777643
No 54
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=32.07 E-value=94 Score=21.53 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=24.5
Q ss_pred ceEEEEEECCcccccCCeEEEEeCCEEEEEEe
Q 037002 112 GKVWRQFRMPMSADLDHVKAHLENGVLRITVP 143 (177)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 143 (177)
....-.|+||.+++...+...+...-|+|.+.
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 34677889999999999999999999999873
No 55
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=31.41 E-value=46 Score=25.58 Aligned_cols=48 Identities=10% Similarity=0.309 Sum_probs=27.9
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEe---eccceEEEEEECCcc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAE---RPFGKVWRQFRMPMS 123 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E---~~~~~f~r~~~LP~~ 123 (177)
++++. +.+++.|.|++.+.. ...-...++..+. ..+|.|+-+++||..
T Consensus 49 ~~n~~--v~~~G~L~I~~~~~~----~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 49 RANSA--LDGNGNLVITARQEA----DGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp TTTEE--ECSSSCEEEEEEECT----TSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred ccceE--EecCCEEEEEEEecC----CCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 45553 444478999888654 1111222333222 457899999999963
No 56
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=29.25 E-value=32 Score=26.09 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=17.4
Q ss_pred CCCeEEEEecCcEEEEEEEEe
Q 037002 70 KDDAKIAVEENRVLRVSGERK 90 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~ 90 (177)
|+.|+|++.+ +.++|+|.+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG 32 (188)
T 4a17_E 13 PDKVTITAKQ-RVVEVKGPLG 32 (188)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCcEEEEeC-CEEEEEcCCe
Confidence 6899999999 8999999853
No 57
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=28.14 E-value=1.2e+02 Score=24.76 Aligned_cols=48 Identities=19% Similarity=0.405 Sum_probs=30.7
Q ss_pred CCCCeEEEEecCcEEEEEEEEecCCcccee-ecC---ceE-------EEE--eeccceEEEEEECCcc
Q 037002 69 KKDDAKIAVEENRVLRVSGERKSDDYYKEE-VEG---DKW-------HRA--ERPFGKVWRQFRMPMS 123 (177)
Q Consensus 69 ~~edI~V~~~~~~~L~I~g~~~~~~~~~~~-~~~---~~~-------~~~--E~~~~~f~r~~~LP~~ 123 (177)
+++++.|+ + +.|+|++.+.. ... ..+ ..| ..+ ...+|.|+-+++||..
T Consensus 85 ~~~Nv~v~--d-G~L~I~a~~~~----~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSVK--K-GCLRIINTVLS----PTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEEE--T-TEEEEECEEEE----EEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEEE--C-CEEEEEEEeCC----CCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 66776664 7 99999998764 110 011 122 222 2578999999999975
No 58
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=27.41 E-value=92 Score=22.27 Aligned_cols=36 Identities=19% Similarity=0.449 Sum_probs=23.5
Q ss_pred CeEEE--E-eCCEEEEEEeccCcccCCCCeEEEEecCCCCCC
Q 037002 128 HVKAH--L-ENGVLRITVPKLVEEKKRQPKVINIDEEPGNSS 166 (177)
Q Consensus 128 ~i~A~--~-~~GvL~I~lPK~~~~~~~~~~~I~I~~~~~~~~ 166 (177)
+|..+ + .||+|+|++--.... ....|.|....+.=+
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg---~~~~i~I~~~~~~ls 120 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTG---KSESITITNDKGRLT 120 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC---CEEEEEEECCTTCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCC---cEeEEEEecCCCCCC
Confidence 44444 4 899999998754432 457888886644333
No 59
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=25.67 E-value=96 Score=23.96 Aligned_cols=44 Identities=5% Similarity=0.049 Sum_probs=24.6
Q ss_pred EEEecCcEEEEEEEEecCCccceeecCceEEEE-eeccceEEEEEECCc
Q 037002 75 IAVEENRVLRVSGERKSDDYYKEEVEGDKWHRA-ERPFGKVWRQFRMPM 122 (177)
Q Consensus 75 V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-E~~~~~f~r~~~LP~ 122 (177)
|.+.+++.|+|++.+.. ...-...++..+ ...+|.|+-++++|.
T Consensus 63 v~v~~~G~L~l~~~~~~----~~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPA----YNKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEE----TTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCC----CCceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 44455467888887653 111111122111 246889999999984
No 60
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=24.96 E-value=1.1e+02 Score=21.44 Aligned_cols=31 Identities=13% Similarity=0.362 Sum_probs=20.4
Q ss_pred CeEEEE---eCCEEEEEEeccCcccCCCCeEEEEecC
Q 037002 128 HVKAHL---ENGVLRITVPKLVEEKKRQPKVINIDEE 161 (177)
Q Consensus 128 ~i~A~~---~~GvL~I~lPK~~~~~~~~~~~I~I~~~ 161 (177)
+|...| .||+|.|++--.... +...|.|+..
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg---~~~~i~i~~~ 132 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSG---KEQKITIKAS 132 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred EEEEEEEECCCCEEEEEEEECCCC---CEEEEEEecC
Confidence 455554 899999998644322 4567777654
No 61
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=24.21 E-value=33 Score=25.69 Aligned_cols=43 Identities=12% Similarity=0.269 Sum_probs=29.8
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEeeccceEEEEEECCcccccCCeEEEEeCCEEEEEE
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAERPFGKVWRQFRMPMSADLDHVKAHLENGVLRITV 142 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~l 142 (177)
|+.|+|++.+ +.++|+|.+-. ..+. |+.. |...++++.|.|..
T Consensus 11 P~gV~v~i~~-~~V~VkGpkG~----------------------L~~~--~~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKNGE----------------------LTRT--LNDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBTTBC----------------------CEEE--CCSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcCCEE----------------------EEEE--CCCC-----EEEEEeCCEEEEEE
Confidence 5788889988 89999888543 3333 3443 44457889988873
No 62
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=23.93 E-value=31 Score=22.39 Aligned_cols=15 Identities=27% Similarity=0.623 Sum_probs=12.9
Q ss_pred cCCeEEEEeCCEEEE
Q 037002 126 LDHVKAHLENGVLRI 140 (177)
Q Consensus 126 ~~~i~A~~~~GvL~I 140 (177)
.++-++.|++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 456789999999998
No 63
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=23.06 E-value=1.2e+02 Score=24.59 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=28.4
Q ss_pred CCCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEEe-eccc-eEEEEEECCc
Q 037002 69 KKDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRAE-RPFG-KVWRQFRMPM 122 (177)
Q Consensus 69 ~~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~E-~~~~-~f~r~~~LP~ 122 (177)
.++++.|+ + |.|+|++.+... ......+.+..+. ..+| .|+-+++||.
T Consensus 72 ~~~Nv~v~--d-G~L~I~a~~~~~---~~~~tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRSYVA--D-GELKMWATRKPG---SDKINMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGEEEE--T-TEEEEECEECTT---SSCEEECEEEESSCBCSSEEEEEEEECCS
T ss_pred cccceEEE--C-CEEEEEEEecCC---CCCEEEEEEEECceeecCeEEEEEEECCC
Confidence 56776664 7 999999997531 0111122222221 2566 8999999984
No 64
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=22.95 E-value=1.2e+02 Score=22.66 Aligned_cols=47 Identities=4% Similarity=0.112 Sum_probs=24.4
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEEE-eeccceEEEEEECCc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHRA-ERPFGKVWRQFRMPM 122 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-E~~~~~f~r~~~LP~ 122 (177)
++++.| .+++.|.|++.+.. ...-...++..+ ...+|.|+-+++||.
T Consensus 36 ~~nv~v--~~~G~L~i~~~~~~----~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 36 ANNVNF--TNDGKLKLGLTSSA----YNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp GGGEEE--CTTSCEEEEEEEEE----TTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred ccCEEE--cCCCEEEEEEecCC----CCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 444433 33367888776543 101111111111 136889999999985
No 65
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=22.51 E-value=1.8e+02 Score=19.83 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=21.3
Q ss_pred eEEEEeCCEEEEEEeccCcccCCCCeEEEEe-cCC
Q 037002 129 VKAHLENGVLRITVPKLVEEKKRQPKVINID-EEP 162 (177)
Q Consensus 129 i~A~~~~GvL~I~lPK~~~~~~~~~~~I~I~-~~~ 162 (177)
++|.+++.+|.|...+.- ..-.|.|. .+.
T Consensus 31 i~A~id~~~L~I~F~~~~-----~~vtItI~~~~t 60 (108)
T 3d33_A 31 ITVFTDGYLLTLKNASPD-----RDMTIRITDMAK 60 (108)
T ss_dssp EEEEEETTEEEEEESSCC-----SEEEEEEEETTT
T ss_pred cEEEEECCEEEEEECCcC-----CCEEEEEEECCC
Confidence 678899999999996553 23677777 443
No 66
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=22.49 E-value=1.3e+02 Score=21.24 Aligned_cols=33 Identities=12% Similarity=0.316 Sum_probs=21.3
Q ss_pred CeEEEE---eCCEEEEEEeccCcccCCCCeEEEEecCCC
Q 037002 128 HVKAHL---ENGVLRITVPKLVEEKKRQPKVINIDEEPG 163 (177)
Q Consensus 128 ~i~A~~---~~GvL~I~lPK~~~~~~~~~~~I~I~~~~~ 163 (177)
+|...| .||+|+|++--... .....|.|....+
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~t---g~~~~i~i~~~~~ 117 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGT---GNKNKLTITNDHN 117 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTT---CCEEEEEECSSSS
T ss_pred eEEEEEEECCCcEEEEEEEEecC---CcEEEEEeecccc
Confidence 455544 89999999863322 2456788876543
No 67
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=22.18 E-value=1.6e+02 Score=20.00 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=27.3
Q ss_pred ceEEEEEECCccc-ccCCeEEEEeCCEEEEEEe
Q 037002 112 GKVWRQFRMPMSA-DLDHVKAHLENGVLRITVP 143 (177)
Q Consensus 112 ~~f~r~~~LP~~v-d~~~i~A~~~~GvL~I~lP 143 (177)
....-.|.||.++ +...+...+...-|+|.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 3567789999888 8999999999999999883
No 68
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=22.08 E-value=2e+02 Score=20.42 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=21.3
Q ss_pred CeEEE--E-eCCEEEEEEeccCcccCCCCeEEEEecC
Q 037002 128 HVKAH--L-ENGVLRITVPKLVEEKKRQPKVINIDEE 161 (177)
Q Consensus 128 ~i~A~--~-~~GvL~I~lPK~~~~~~~~~~~I~I~~~ 161 (177)
+|..+ + .||+|+|++--.... ....|.|...
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg---~~~~i~I~~~ 115 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTG---KEQQIVIQSS 115 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred EEEEEEEeccCcEEEEEEEEccCC---CEeEEEEecC
Confidence 44444 4 899999998754432 4578888865
No 69
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=21.81 E-value=1.4e+02 Score=21.28 Aligned_cols=32 Identities=25% Similarity=0.462 Sum_probs=20.5
Q ss_pred eEEEE-eCCEEEEEEeccCcccCCCCeEEEEecCCC
Q 037002 129 VKAHL-ENGVLRITVPKLVEEKKRQPKVINIDEEPG 163 (177)
Q Consensus 129 i~A~~-~~GvL~I~lPK~~~~~~~~~~~I~I~~~~~ 163 (177)
++..+ .||+|+|++--.... ....|.|....+
T Consensus 85 Vtf~iD~nGiL~Vsa~d~~tg---~~~~i~I~~~~~ 117 (152)
T 3dob_A 85 VTFNIDANGILNVSAEDKSTG---KSNRITIQNEKG 117 (152)
T ss_dssp EEEEECTTCCEEEEEEETTTC---CEEEEEECCC--
T ss_pred EEEEeCCCCeEEEEEEEcCCC---CEEEEEEEcCCC
Confidence 34444 899999998654332 457888876654
No 70
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=21.72 E-value=1.7e+02 Score=22.48 Aligned_cols=49 Identities=22% Similarity=0.317 Sum_probs=28.3
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCccceeecCceEEE---EeeccceEEEEEECCcc
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYYKEEVEGDKWHR---AERPFGKVWRQFRMPMS 123 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~---~E~~~~~f~r~~~LP~~ 123 (177)
++++ .+.+ +.|+|++.+.... ...-...++.. ....+|.|+-+++||..
T Consensus 46 ~~nv--~v~~-G~L~i~~~~~~~~--~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 46 IENA--RVGG-GVLIIEARRESYE--GREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp TTTE--EEET-TEEEEEEEEEEET--TEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred CcCE--EEEC-CEEEEEEEeccCC--CCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 4554 4567 8999999765300 01111222222 13468899999999963
No 71
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=21.34 E-value=1.7e+02 Score=21.05 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=27.4
Q ss_pred cceEEEEEECCcccccCCeEEEEeCCEEEEEEe
Q 037002 111 FGKVWRQFRMPMSADLDHVKAHLENGVLRITVP 143 (177)
Q Consensus 111 ~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~lP 143 (177)
.....-.|+||.++....|...+...-|+|.+.
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 335677899999999999999999888998773
No 72
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A*
Probab=20.70 E-value=2.5e+02 Score=22.04 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=28.0
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCcc------ceeecCceEEEEe-eccc-eEEEEEECC
Q 037002 70 KDDAKIAVEENRVLRVSGERKSDDYY------KEEVEGDKWHRAE-RPFG-KVWRQFRMP 121 (177)
Q Consensus 70 ~edI~V~~~~~~~L~I~g~~~~~~~~------~~~~~~~~~~~~E-~~~~-~f~r~~~LP 121 (177)
++++.| .+ |.|+|++.+...... ...-...++..+. ..+| .|+-+++||
T Consensus 55 ~~Nv~v--~d-G~L~I~a~~~~~~~~~~~~~~~~~y~s~~i~s~~~~~~G~~~e~r~k~p 111 (266)
T 4ate_A 55 KGNAFV--SD-GFLNLRSTLRKEPSSVQDPFKDIWVDAAAAVSKTKAQPGYYYEARFKAS 111 (266)
T ss_dssp TTSEEE--ET-TEEEEECEESSCGGGSSCTTTSCCEEECEEEEEEEECTTCEEEEEEECC
T ss_pred hhhEEE--eC-CcEEEEEEecCCCcccccCCCCccEEEEEEEEeCcCcCCeEEEEEEEcC
Confidence 466655 67 999999987541000 0011122222222 4678 799999998
No 73
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans}
Probab=20.15 E-value=1.6e+02 Score=24.65 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=14.2
Q ss_pred CCCCeEEEEecCcEEEEEEEEec
Q 037002 69 KKDDAKIAVEENRVLRVSGERKS 91 (177)
Q Consensus 69 ~~edI~V~~~~~~~L~I~g~~~~ 91 (177)
+++++.| .+ |.|+|++.+..
T Consensus 80 ~~eNv~V--~d-G~LvItA~r~~ 99 (363)
T 4asm_B 80 MQNHVAV--SG-GNLNIWASRIP 99 (363)
T ss_dssp CTTSEEE--ET-TEEEEEEECCT
T ss_pred ecccEEE--EC-CEEEEEEEecC
Confidence 4566555 47 89999998754
Done!