Query 037005
Match_columns 334
No_of_seqs 157 out of 1348
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 12:35:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037005.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037005hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 6.6E-36 2.2E-40 258.2 13.4 112 1-116 40-151 (151)
2 2c2v_B Ubiquitin-conjugating e 100.0 2.9E-36 1E-40 261.4 11.3 114 1-118 41-154 (154)
3 1yh2_A HSPC150 protein similar 100.0 1.2E-35 4.1E-40 261.4 14.1 118 1-118 40-157 (169)
4 2r0j_A Ubiquitin carrier prote 100.0 7.9E-36 2.7E-40 257.2 12.7 112 1-116 37-148 (149)
5 1z2u_A Ubiquitin-conjugating e 100.0 1.9E-35 6.6E-40 254.8 13.2 111 1-115 40-150 (150)
6 2ayv_A Ubiquitin-conjugating e 100.0 2.1E-35 7.1E-40 259.9 13.2 110 1-114 57-166 (166)
7 1fxt_A Ubiquitin-conjugating e 100.0 9.2E-36 3.1E-40 256.5 10.2 111 1-115 38-149 (149)
8 2aak_A UBC1, ubiquitin conjuga 100.0 3.3E-35 1.1E-39 253.8 13.4 112 1-116 40-151 (152)
9 1jat_A Ubiquitin-conjugating e 100.0 1.7E-35 5.9E-40 256.6 11.2 113 1-117 41-153 (155)
10 1zdn_A Ubiquitin-conjugating e 100.0 1.7E-35 5.7E-40 257.7 11.1 110 1-114 49-158 (158)
11 2c4o_A Ubiquitin-conjugating e 100.0 3.6E-35 1.2E-39 258.0 13.2 111 1-115 55-165 (165)
12 1ayz_A UBC2, ubiquitin-conjuga 100.0 3.8E-35 1.3E-39 258.9 13.2 115 1-119 40-154 (169)
13 2bep_A Ubiquitin-conjugating e 100.0 4.4E-35 1.5E-39 255.0 13.4 112 1-116 47-159 (159)
14 3h8k_A Ubiquitin-conjugating e 100.0 7.1E-35 2.4E-39 254.2 13.3 115 1-115 40-163 (164)
15 2ucz_A UBC7, ubiquitin conjuga 100.0 7.2E-35 2.5E-39 254.7 12.6 115 1-115 41-164 (165)
16 3k9o_A Ubiquitin-conjugating e 100.0 1.1E-34 3.8E-39 261.2 14.1 115 1-119 44-159 (201)
17 2gjd_A Ubiquitin-conjugating e 100.0 1.2E-34 4.1E-39 252.0 13.0 113 1-115 45-157 (157)
18 2e2c_A Ubiquitin conjugating e 100.0 1.2E-34 4.1E-39 251.5 12.5 111 1-116 45-155 (156)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.4E-34 4.8E-39 260.8 13.2 111 1-115 81-192 (193)
20 3rcz_B SUMO-conjugating enzyme 100.0 1.7E-34 5.7E-39 253.5 13.2 113 1-115 51-163 (163)
21 2grr_A Ubiquitin-conjugating e 100.0 2.5E-34 8.5E-39 251.0 13.0 113 1-115 48-160 (161)
22 3bzh_A Ubiquitin-conjugating e 100.0 2.5E-34 8.6E-39 259.2 13.3 111 1-115 84-194 (194)
23 2pwq_A Ubiquitin conjugating e 100.0 1.2E-34 4.1E-39 265.4 10.6 115 1-119 59-174 (216)
24 3fn1_B NEDD8-conjugating enzym 100.0 3.6E-34 1.2E-38 250.7 12.1 114 2-115 51-167 (167)
25 1wzv_A Ubiquitin-conjugating e 100.0 4.2E-34 1.4E-38 247.6 12.0 113 1-117 41-153 (155)
26 1tte_A Ubiquitin-conjugating e 100.0 1.6E-34 5.3E-39 264.5 9.4 114 1-118 39-153 (215)
27 2onu_A Ubiquitin-conjugating e 100.0 1.9E-34 6.6E-39 250.1 9.4 112 1-116 35-148 (152)
28 3e46_A Ubiquitin-conjugating e 100.0 1.6E-33 5.4E-38 263.5 14.0 116 1-120 96-212 (253)
29 1i7k_A Ubiquitin-conjugating e 100.0 8.9E-34 3E-38 252.7 11.1 111 1-116 66-176 (179)
30 2z5d_A Ubiquitin-conjugating e 100.0 4.3E-34 1.5E-38 255.1 8.5 112 1-116 57-170 (179)
31 1c4z_D UBCH7, ubiquitin conjug 100.0 6.7E-34 2.3E-38 246.1 8.8 111 4-117 41-151 (154)
32 2y9m_A Ubiquitin-conjugating e 100.0 3.7E-33 1.3E-37 246.4 12.5 112 1-115 54-168 (172)
33 1yf9_A Ubiquitin carrier prote 100.0 1.5E-33 5.2E-38 249.3 9.0 112 1-116 44-157 (171)
34 1y8x_A Ubiquitin-conjugating e 100.0 1.2E-32 4.1E-37 240.6 12.2 107 2-112 41-147 (160)
35 3rz3_A Ubiquitin-conjugating e 100.0 1.1E-32 3.8E-37 245.5 11.6 115 1-115 44-173 (183)
36 2awf_A Ubiquitin-conjugating e 100.0 6.6E-33 2.3E-37 245.0 8.9 109 1-109 54-172 (172)
37 1yrv_A Ubiquitin-conjugating l 100.0 1E-32 3.4E-37 243.6 9.1 109 1-112 59-168 (169)
38 2nvu_C NEDD8-conjugating enzym 100.0 2.9E-32 9.9E-37 242.8 11.7 107 2-112 61-167 (180)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.4E-31 4.8E-36 262.9 13.7 115 1-119 39-153 (399)
40 3o2u_A NEDD8-conjugating enzym 100.0 1.3E-31 4.4E-36 240.5 11.9 107 3-113 71-177 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 2.1E-29 7.2E-34 221.0 9.2 103 1-107 56-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 4.2E-29 1.4E-33 240.9 9.3 116 1-116 116-244 (323)
43 2q0v_A Ubiquitin-conjugating e 99.9 4.8E-29 1.6E-33 217.8 3.6 93 1-98 61-156 (156)
44 1jat_B Ubiquitin-conjugating e 99.9 2.2E-28 7.4E-33 208.6 0.7 90 1-95 46-138 (138)
45 2a4d_A Ubiquitin-conjugating e 99.9 2E-27 6.7E-32 208.8 6.0 90 1-92 65-156 (160)
46 2fo3_A Ubiquitin-conjugating e 99.9 1.1E-26 3.8E-31 195.1 8.6 81 1-85 42-123 (125)
47 2hlw_A Ubiquitin-conjugating e 99.9 3.6E-27 1.2E-31 208.6 4.0 90 1-92 75-166 (170)
48 2h2y_A Ubiquitin-conjugating e 99.9 4.3E-26 1.5E-30 194.4 9.1 79 1-83 56-135 (136)
49 2a7l_A Hypothetical ubiquitin- 99.9 2.9E-25 9.9E-30 190.0 8.6 75 1-79 60-136 (136)
50 2f4w_A Ubiquitin-conjugating e 99.9 6E-25 2.1E-29 196.7 10.4 110 1-113 50-162 (187)
51 1zuo_A Hypothetical protein LO 99.9 1.5E-24 5E-29 194.2 0.7 103 1-114 66-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.7 6.7E-18 2.3E-22 150.1 1.9 85 1-96 62-160 (172)
53 3r3q_A Suppressor protein STP2 99.6 8.5E-16 2.9E-20 135.6 5.2 79 2-85 68-161 (162)
54 3kpa_A Probable ubiquitin fold 99.2 6.9E-13 2.4E-17 116.5 -0.3 67 2-71 65-145 (168)
55 3obq_A Tumor susceptibility ge 99.1 4.3E-11 1.5E-15 104.0 6.1 68 7-80 62-138 (146)
56 2ebm_A RWD domain-containing p 83.4 1.3 4.6E-05 35.7 4.7 25 11-35 54-78 (128)
57 2day_A Ring finger protein 25; 82.1 0.9 3.1E-05 36.7 3.2 25 12-36 59-83 (128)
58 2yz0_A Serine/threonine-protei 82.0 1 3.5E-05 37.0 3.5 24 12-35 62-85 (138)
59 1ukx_A GCN2, GCN2 EIF2alpha ki 78.4 1.1 3.8E-05 36.5 2.6 23 12-34 63-85 (137)
60 2ebk_A RWD domain-containing p 77.6 1.2 4E-05 36.2 2.5 23 12-34 56-78 (128)
61 3zqs_A E3 ubiquitin-protein li 76.2 7 0.00024 34.9 7.3 51 10-78 36-86 (186)
62 2dax_A Protein C21ORF6; RWD do 75.5 1.8 6.2E-05 36.3 3.1 23 13-35 74-96 (152)
63 2daw_A RWD domain containing p 72.9 2.8 9.6E-05 35.5 3.7 23 13-35 76-98 (154)
64 2cwb_A Chimera of immunoglobul 71.6 0.81 2.8E-05 37.8 0.0 37 83-119 23-59 (108)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=6.6e-36 Score=258.23 Aligned_cols=112 Identities=46% Similarity=0.854 Sum_probs=109.5
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+||+++| .+.|+|.++|.+||.+|++||.+
T Consensus 40 i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~~ 115 (151)
T 4gpr_A 40 ITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDIL----KDQWSPALTLSRVLLSISSLLTD 115 (151)
T ss_dssp EECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHC
T ss_pred EeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccc----cCCCCCCCcHHHHHHHHHHHhcC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
|++++|+|.+||++|++|+++|.++||+||++||++
T Consensus 116 p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 116 PNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999974
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-36 Score=261.45 Aligned_cols=114 Identities=47% Similarity=0.831 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+||+++| .+.|+|+++|.+||.+|++||.+
T Consensus 41 i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~~ 116 (154)
T 2c2v_B 41 IAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL----KDKWSPALQIRTVLLSIQALLSA 116 (154)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHH----HTSCCTTCCHHHHHHHHHHHTTS
T ss_pred EECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhc----cCCCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGI 118 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~ 118 (334)
|++++|+|.+||++|++|+++|.++||+||++||..++
T Consensus 117 pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~~~ 154 (154)
T 2c2v_B 117 PNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI 154 (154)
T ss_dssp CCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999998653
No 3
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-35 Score=261.38 Aligned_cols=118 Identities=64% Similarity=1.104 Sum_probs=112.7
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.+|+.+.|+|.++|.+||.+|++||.+
T Consensus 40 I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~ 119 (169)
T 1yh2_A 40 ILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSE 119 (169)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHS
T ss_pred EECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999766558999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGI 118 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~ 118 (334)
|++++|+|.+||++|++|+++|.++||+|+++||+...
T Consensus 120 p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~~ 157 (169)
T 1yh2_A 120 PNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQ 157 (169)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999999999999999998643
No 4
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=7.9e-36 Score=257.22 Aligned_cols=112 Identities=48% Similarity=0.902 Sum_probs=109.5
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+||+++| .+.|+|+++|.+||.+|++||.+
T Consensus 37 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~~ 112 (149)
T 2r0j_A 37 INGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDIL----KDKWSPALQIRTVLLSIQALLSS 112 (149)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGG----TTTCCTTSCHHHHHHHHHHHHHS
T ss_pred EECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhc----CCCCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||++
T Consensus 113 p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 113 PEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999975
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.9e-35 Score=254.77 Aligned_cols=111 Identities=51% Similarity=0.925 Sum_probs=108.6
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+||+++| .+.|+|.++|.+||.+|++||.+
T Consensus 40 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~~ 115 (150)
T 1z2u_A 40 IMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL----RSQWSPALTISKVLLSICSLLCD 115 (150)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccc----cCCCCCCCCHHHHHHHHHHHhhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||+
T Consensus 116 pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 116 PNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999984
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-35 Score=259.89 Aligned_cols=110 Identities=54% Similarity=0.969 Sum_probs=108.0
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|.||+++| .+.|+|+++|.+||.+|++||.+
T Consensus 57 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL----~~~WsP~~ti~~vL~sI~sll~~ 132 (166)
T 2ayv_A 57 IMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDIL----KDQWSPALTISKVLLSISSLLTD 132 (166)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccc----cccCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHh
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYA 114 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA 114 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||
T Consensus 133 pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 133 PNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997
No 7
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=9.2e-36 Score=256.53 Aligned_cols=111 Identities=44% Similarity=0.840 Sum_probs=108.4
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++| .+.|+|.++|.+||.+|++||.
T Consensus 38 I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~ 113 (149)
T 1fxt_A 38 FLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDIL----KNAWSPVITLKSALISLQALLQ 113 (149)
T ss_dssp EECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHH----HTSCCTTCCHHHHHHHHHHHHH
T ss_pred EECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcC----CCCCCCCCcHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999998 999999999 6899999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
+|++++|+|.+||++|++|+++|.++||+||++||+
T Consensus 114 ~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 114 SPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999985
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.3e-35 Score=253.85 Aligned_cols=112 Identities=37% Similarity=0.757 Sum_probs=108.7
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++| .+.|+|.++|.+||.+|++||.+
T Consensus 40 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~~ 115 (152)
T 2aak_A 40 IFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCD 115 (152)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGG----TTSCCTTCCHHHHHHHHHHHHTS
T ss_pred EeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhh----cCCCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68899999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||..
T Consensus 116 p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 116 PNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999964
No 9
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.7e-35 Score=256.61 Aligned_cols=113 Identities=50% Similarity=0.887 Sum_probs=110.0
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|.||+++| .+.|+|.++|.+||.+|+.||.+
T Consensus 41 I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~~ 116 (155)
T 1jat_A 41 IEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVL----KTNWSPALQIRTVLLSIQALLAS 116 (155)
T ss_dssp EECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGG----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhh----ccCCCCCCCHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTG 117 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~ 117 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||++.
T Consensus 117 p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~~ 153 (155)
T 1jat_A 117 PNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKK 153 (155)
T ss_dssp CCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEEC
T ss_pred CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999999754
No 10
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-35 Score=257.68 Aligned_cols=110 Identities=41% Similarity=0.726 Sum_probs=107.9
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|+||+++| .+.|+|.++|.+||.+|+.||.+
T Consensus 49 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vL~~i~~ll~~ 124 (158)
T 1zdn_A 49 IEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVL----KRDWTAELGIRHVLLTIKCLLIH 124 (158)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHH----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhc----CCCCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHh
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYA 114 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA 114 (334)
|++++|+|.+||++|++|+++|.++||+||++||
T Consensus 125 pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 125 PNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp CCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=3.6e-35 Score=257.96 Aligned_cols=111 Identities=51% Similarity=0.931 Sum_probs=108.6
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++| .+.|+|+++|.+||.+|++||.+
T Consensus 55 I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL----~~~W~P~~ti~~vL~si~~ll~~ 130 (165)
T 2c4o_A 55 IMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL----RSQWSPALTISKVLLSICSLLCD 130 (165)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhh----cCCCCCcCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||+
T Consensus 131 pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 131 PNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999984
No 12
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-35 Score=258.85 Aligned_cols=115 Identities=34% Similarity=0.707 Sum_probs=111.0
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|.||+++| .+.|+|.++|.+||++|++||.+
T Consensus 40 I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL----~~~WsP~~~i~~vL~si~~ll~~ 115 (169)
T 1ayz_A 40 IIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDIL----QNRWTPTYDVASILTSIQSLFND 115 (169)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGG----TTTCCTTCCHHHHHHHHHHHHTC
T ss_pred EECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhh----ccCCCCcCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68899999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGIG 119 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~~ 119 (334)
|++++|+|.+||.+|++++++|.++||+|+++||.....
T Consensus 116 Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~~~ 154 (169)
T 1ayz_A 116 PNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMD 154 (169)
T ss_dssp CCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999999986443
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.4e-35 Score=254.99 Aligned_cols=112 Identities=44% Similarity=0.801 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++| .+.|+|.++|.+||.+|++||.
T Consensus 47 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL----~~~W~p~~~i~~vl~~i~~ll~ 122 (159)
T 2bep_A 47 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL----KDQWAAAMTLRTVLLSLQALLA 122 (159)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHH
T ss_pred EECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhh----hccCCCCCcHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999994 999999999 6789999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
+|++++|+|.+||++|++|+++|.++||+||++||.+
T Consensus 123 ~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 123 AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999963
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=7.1e-35 Score=254.23 Aligned_cols=115 Identities=34% Similarity=0.698 Sum_probs=109.4
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCC---------CCCCCCCCCHHHHH
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPP---------KGAWQPSLNISTVL 71 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~---------~e~WsPs~TL~sIL 71 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+||+++|..|. .+.|+|.++|.+||
T Consensus 40 I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL 119 (164)
T 3h8k_A 40 IMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKIL 119 (164)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHH
T ss_pred EeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHH
Confidence 579999999999999999999999999999999999999999999999999996432 27899999999999
Q ss_pred HHHHHhhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 72 TSIGLLLSEPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 72 lsIqsLL~~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
++|++||.+|++++|+|.+||.+|++|+++|.++||+|+++++.
T Consensus 120 ~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 120 LSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp HHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999874
No 15
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=7.2e-35 Score=254.71 Aligned_cols=115 Identities=37% Similarity=0.707 Sum_probs=109.4
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCC---------CCCCCCCCCHHHHH
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPP---------KGAWQPSLNISTVL 71 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~---------~e~WsPs~TL~sIL 71 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|+||+++|..|. .+.|+|.++|.+||
T Consensus 41 i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL 120 (165)
T 2ucz_A 41 IQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKIL 120 (165)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHH
T ss_pred EECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHH
Confidence 579999999999999999999999999999999999999999999999999995431 47899999999999
Q ss_pred HHHHHhhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 72 TSIGLLLSEPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 72 lsIqsLL~~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
++|++||.+|++++|+|.+||.+|++|+++|.++||+|+++|+.
T Consensus 121 ~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 121 LSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp HHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999874
No 16
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.1e-34 Score=261.23 Aligned_cols=115 Identities=43% Similarity=0.785 Sum_probs=111.2
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++| .+.|+|.++|.+||++|++||.
T Consensus 44 i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL----~~~W~p~~~i~~vL~~i~~ll~ 119 (201)
T 3k9o_A 44 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL----KDQWAAAMTLRTVLLSLQALLA 119 (201)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCccc----ccCCCCCCCHHHHHHHHHHHhc
Confidence 57999999999999999999999999999999999999999994 999999999 6899999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCC
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGIG 119 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~~ 119 (334)
+|++++|+|.+||++|++|+++|.++||+||++||+.+..
T Consensus 120 ~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~~ 159 (201)
T 3k9o_A 120 AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVS 159 (201)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999999999998655
No 17
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.2e-34 Score=252.04 Aligned_cols=113 Identities=35% Similarity=0.718 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++|.. .+.|+|.++|.+||.+|++||.+
T Consensus 45 I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~~~W~p~~~i~~vl~~i~~ll~~ 122 (157)
T 2gjd_A 45 IPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNE--DQDWRPAITLKQIVLGVQDLLDS 122 (157)
T ss_dssp EECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCT--TTTCCTTCCHHHHHHHHHHHHTS
T ss_pred EECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccC--CCCCCCCCcHHHHHHHHHHHHhC
Confidence 5799999999999999999999999999999999999999999999999999942 12799999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||+
T Consensus 123 p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 123 PNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999985
No 18
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-34 Score=251.55 Aligned_cols=111 Identities=35% Similarity=0.726 Sum_probs=107.8
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++| .+.|+|.++|.+||.+|++||.+
T Consensus 45 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vL~si~~ll~~ 120 (156)
T 2e2c_A 45 LDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL----KENWTASYDVRTILLSLQSLLGE 120 (156)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHTTS
T ss_pred EECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccc----cccCCCCCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
|++++|+|.+||++| +|+++|.++||+|+++|+..
T Consensus 121 pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 121 PNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp CCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 999999999999999 89999999999999999853
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-34 Score=260.75 Aligned_cols=111 Identities=45% Similarity=0.782 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceec-CCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNID-NGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd-~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+ .+|.||+++| .+.|+|.++|.+||++|+.||.
T Consensus 81 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL----~~~WsP~~ti~~vL~sI~sll~ 156 (193)
T 2f4z_A 81 IAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDIL----KHEWSPALTIRTALLSIQAMLA 156 (193)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGG----TTTCCTTSCHHHHHHHHHHHHH
T ss_pred EeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccc----cccCCCCCCHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999999998 5999999999 6789999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
+|++++|+|.+||++|++|+++|.++||+||++||+
T Consensus 157 ~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 157 DPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAK 192 (193)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999996
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-34 Score=253.45 Aligned_cols=113 Identities=31% Similarity=0.679 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|+||+++|.. .+.|+|.++|.+||++|++||.+
T Consensus 51 I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~--~~~W~p~~ti~~vL~~i~~ll~~ 128 (163)
T 3rcz_B 51 IPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNE--EEGWKPAITIKQILLGIQDLLDD 128 (163)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCT--TTTCCTTCCHHHHHHHHHHHHTS
T ss_pred EECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCC--CCCcCCcCcHHHHHHHHHHHHhC
Confidence 5799999999999999999999999999999999999999999999999999952 23699999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||.
T Consensus 129 P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 129 PNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999984
No 21
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.5e-34 Score=250.99 Aligned_cols=113 Identities=34% Similarity=0.705 Sum_probs=108.4
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++|.. .+.|+|.++|.+||.+|+.||.+
T Consensus 48 i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~--~~~W~p~~~i~~vl~~i~~ll~~ 125 (161)
T 2grr_A 48 IPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEE--DKDWRPAITIKQILLGIQELLNE 125 (161)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCT--TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCC--CCCcCCCCcHHHHHHHHHHHHhC
Confidence 5799999999999999999999999999999999999999999999999999942 14899999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
|++++|+|.+||.+|++|+++|.++||+||++||.
T Consensus 126 p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 126 PNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999996
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2.5e-34 Score=259.15 Aligned_cols=111 Identities=50% Similarity=0.837 Sum_probs=108.6
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|.||+++| .+.|+|.++|.+||++|+.||.+
T Consensus 84 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL----~~~WsP~~ti~~vL~sI~~ll~~ 159 (194)
T 3bzh_A 84 ILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL----KDNWSPALTISKVLLSICSLLTD 159 (194)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhh----hccCCCcCcHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
|++++|+|.+||.+|++|+++|.++||+|+++||+
T Consensus 160 pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 160 CNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999984
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.2e-34 Score=265.37 Aligned_cols=115 Identities=46% Similarity=0.818 Sum_probs=109.8
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceec-CCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNID-NGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd-~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+ .+|.||+++| .+.|+|.++|.+||++|++||.
T Consensus 59 I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL----~~~WsP~~ti~~VL~sI~sLL~ 134 (216)
T 2pwq_A 59 IKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVL----KNEWSPALTIRTALLSIQALLS 134 (216)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHH----HHHCCTTCCHHHHHHHHHHHHH
T ss_pred EeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhh----cccCCCCCcHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999999998 5999999999 6789999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCC
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGIG 119 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~~ 119 (334)
+|++++|+|.+||++|++|+++|.++||+|+++||+.+..
T Consensus 135 ~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~ 174 (216)
T 2pwq_A 135 DPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKE 174 (216)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC--
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999999999999999987654
No 24
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.6e-34 Score=250.74 Aligned_cols=114 Identities=30% Similarity=0.585 Sum_probs=107.8
Q ss_pred CCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCC--CCCCCCCCCHHHHHHHHHHhhc
Q 037005 2 EGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPP--KGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 2 ~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~--~e~WsPs~TL~sILlsIqsLL~ 79 (334)
.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|+||+++|..+. .+.|+|.++|.+||++|++||.
T Consensus 51 igp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~ 130 (167)
T 3fn1_B 51 VTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFT 130 (167)
T ss_dssp ECCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTT
T ss_pred ECCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHc
Confidence 49999999999999999999999999999999999999999999999999996431 2479999999999999999999
Q ss_pred C-CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q 037005 80 E-PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 80 ~-PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~ 115 (334)
+ |++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 131 ~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 131 DLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9 79999999999999999999999999999999984
No 25
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.2e-34 Score=247.63 Aligned_cols=113 Identities=31% Similarity=0.680 Sum_probs=108.8
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|. |++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++|+ .+.|+|.++|.+||.+|+.||.+
T Consensus 41 I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~---~~~W~p~~~i~~vl~~i~~ll~~ 116 (155)
T 1wzv_A 41 LL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIIS---SENWKPCTKTCQVLEALNVLVNR 116 (155)
T ss_dssp EC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGC---TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred Ec-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCC---ccCCCCCCcHHHHHHHHHHHHhC
Confidence 46 999999999999999999999999999999999999999999999999995 47899999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTG 117 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~ 117 (334)
|++++|+|.+||++|++|+++|.++||+|+++||++.
T Consensus 117 p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 117 PNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp CCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999999753
No 26
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.6e-34 Score=264.45 Aligned_cols=114 Identities=42% Similarity=0.808 Sum_probs=110.8
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++| .+.|+|.++|.+||++|++||.
T Consensus 39 I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL----~~~WsP~~ti~~VL~sI~sLL~ 114 (215)
T 1tte_A 39 FLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDIL----RNAWSPVITLKSALISLQALLQ 114 (215)
T ss_dssp CCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTT----TCCSCTTCCHHHHHHHHHHHHT
T ss_pred EeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccC----CCCCCCcCcHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999 999999999 6899999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCC
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGI 118 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~ 118 (334)
+|++++|+|.+||++|++|+++|.++||+||++||+.+.
T Consensus 115 ~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~~ 153 (215)
T 1tte_A 115 SPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETS 153 (215)
T ss_dssp SCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCCS
T ss_pred CCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999999999999999998643
No 27
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.9e-34 Score=250.08 Aligned_cols=112 Identities=32% Similarity=0.762 Sum_probs=108.0
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHH-HHHhh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTS-IGLLL 78 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILls-IqsLL 78 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+. +|.||+++| .+.|+|.++|.+||.+ |+.||
T Consensus 35 i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il----~~~W~p~~~i~~vl~~ii~~Ll 110 (152)
T 2onu_A 35 FHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVI----NQTWTPLYSLVNVFEVFLPQLL 110 (152)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHH----HHHCCTTCCHHHHHHTHHHHHH
T ss_pred EECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccc----cccCCCCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999995 999999999 6789999999999999 68999
Q ss_pred cCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 79 SEPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 79 ~~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 111 ~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 111 TYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp HSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999974
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.6e-33 Score=263.51 Aligned_cols=116 Identities=42% Similarity=0.771 Sum_probs=111.8
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceec-CCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNID-NGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd-~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+ .+|.||+++| .+.|+|.++|.+||++|++||.
T Consensus 96 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL----~~~WsP~~ti~~vL~sI~~ll~ 171 (253)
T 3e46_A 96 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL----KDQWAAAMTLRTVLLSLQALLA 171 (253)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGG----TTCCCTTCCHHHHHHHHHHHHH
T ss_pred EECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccc----cCCCCCCCCHHHHHHHHHHHhc
Confidence 5799999999999999999999999999999999999999999 4999999999 6899999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCCC
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGIGG 120 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~~~ 120 (334)
+|++++|+|.+||++|++|+++|.++||+||++||+.+...
T Consensus 172 ~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~~~ 212 (253)
T 3e46_A 172 AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSS 212 (253)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSCCC
T ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccccCc
Confidence 99999999999999999999999999999999999986653
No 29
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-34 Score=252.74 Aligned_cols=111 Identities=39% Similarity=0.682 Sum_probs=107.6
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|+||+++| .+.|+|.++|.+||++|++||.+
T Consensus 66 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL----~~~WsP~~ti~~vL~sI~sll~~ 141 (179)
T 1i7k_A 66 IHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDIL----KEKWSALYDVRTILLSIQSLLGE 141 (179)
T ss_dssp EEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccC----cCcCCCCCCHHHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
|++++|+|.+||++| +|+++|.++|++++++++..
T Consensus 142 Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 142 PNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999 99999999999999998864
No 30
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=255.13 Aligned_cols=112 Identities=36% Similarity=0.793 Sum_probs=109.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHH-HHHhh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTS-IGLLL 78 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILls-IqsLL 78 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+. +|.||+++| .+.|+|.++|.+||.+ |+.||
T Consensus 57 I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL----~~~WsP~~ti~~iL~s~I~~Ll 132 (179)
T 2z5d_A 57 FYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVI----NQTWTALYDLTNIFESFLPQLL 132 (179)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHH----HHHCCTTCCTTHHHHTHHHHHH
T ss_pred EECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEecccc----ccCCCCCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999998 999999999 6799999999999999 99999
Q ss_pred cCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 79 SEPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 79 ~~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 133 ~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 133 AYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp HSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred hCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999974
No 31
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=6.7e-34 Score=246.12 Aligned_cols=111 Identities=37% Similarity=0.832 Sum_probs=104.7
Q ss_pred CCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcCCCC
Q 037005 4 PEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSEPNP 83 (334)
Q Consensus 4 P~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~Pnp 83 (334)
|++|||+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++|. .+.|+|.++|.+||.+|++||.+|++
T Consensus 41 P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~---~~~W~p~~~i~~vl~~i~~ll~~p~~ 117 (154)
T 1c4z_D 41 PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVIS---AENWKPATKTDQVIQSLIALVNDPQP 117 (154)
T ss_dssp CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTS---SSSCCTTCCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCC---CCCCCCCCcHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999993 37899999999999999999999999
Q ss_pred CChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCC
Q 037005 84 DDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTG 117 (334)
Q Consensus 84 dsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~ 117 (334)
++|+|.+||++|++|+++|.++||+|+++||+..
T Consensus 118 ~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 118 EHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp SSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred CchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999753
No 32
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3.7e-33 Score=246.39 Aligned_cols=112 Identities=28% Similarity=0.566 Sum_probs=107.4
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEecc-ccccceec-CCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFAT-PIYHPNID-NGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLL 78 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlT-pIfHPNVd-~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL 78 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.| +||||||+ .+|.||+++|. .+.|+|.++|.+||.+|++||
T Consensus 54 I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~---~~~W~p~~~i~~vL~si~~ll 130 (172)
T 2y9m_A 54 ISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILK---PEEWTPVWDLLHCVHAVWRLL 130 (172)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGS---TTTCCTTCCHHHHHHHHHHHH
T ss_pred EECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccC---CCCCCCcCcHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999 99999994 79999999993 279999999999999999999
Q ss_pred cCCCCCChhhHHHHHHHHH-CHHHHHHHHHHHHHHHhc
Q 037005 79 SEPNPDDGLMCEASQEYKY-NRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 79 ~~PnpdsPlN~EAA~lyk~-n~eaF~rkare~tkkyA~ 115 (334)
.+|++++|+|.+||++|++ |+++|.++||+|+++++.
T Consensus 131 ~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 131 REPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp HSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred hCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 999999999999999874
No 33
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-33 Score=249.28 Aligned_cols=112 Identities=35% Similarity=0.736 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecC-CCCeeeccCCCCCCCCCCCCCCHHHHHHHH-HHhh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDN-GGRICLDILNLPPKGAWQPSLNISTVLTSI-GLLL 78 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~-~G~ICLdiL~~~~~e~WsPs~TL~sILlsI-qsLL 78 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++| .+.|+|.++|.+||.+| +.||
T Consensus 44 I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL----~~~W~p~~~i~~vL~sil~~ll 119 (171)
T 1yf9_A 44 FKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVI----NQTWTPMYQLENIFDVFLPQLL 119 (171)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHH----HHHCCTTCCTHHHHHTHHHHHH
T ss_pred EECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecccc----ccCCCCCCcHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999995 999999999 67899999999999997 7999
Q ss_pred cCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 79 SEPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 79 ~~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
.+|++++|+|.+||.+|++|+++|.++||+|+++||+.
T Consensus 120 ~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 120 RYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp HSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 99999999999999999999999999999999999973
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=1.2e-32 Score=240.57 Aligned_cols=107 Identities=35% Similarity=0.701 Sum_probs=104.0
Q ss_pred CCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcCC
Q 037005 2 EGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSEP 81 (334)
Q Consensus 2 ~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~P 81 (334)
.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++| .+.|+|+++|.+||.+|++||.+|
T Consensus 41 igp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL----~~~W~p~~~i~~vL~~i~~ll~~P 116 (160)
T 1y8x_A 41 ICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNIL----REDWKPVLTINSIIYGLQYLFLEP 116 (160)
T ss_dssp ECCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHSC
T ss_pred ECCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccc----hhhccCCCCHHHHHHHHHHHHhCC
Confidence 3999999999999999999999999999999999999999999999999999 689999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHCHHHHHHHHHHHHHH
Q 037005 82 NPDDGLMCEASQEYKYNRQAFDLKARSMTEK 112 (334)
Q Consensus 82 npdsPlN~EAA~lyk~n~eaF~rkare~tkk 112 (334)
++++|+|.+||.+|++|+++|.++||+|++.
T Consensus 117 n~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 117 NPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp CCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999873
No 35
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.98 E-value=1.1e-32 Score=245.48 Aligned_cols=115 Identities=33% Similarity=0.619 Sum_probs=106.7
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCC---------CCCCCCCCCHHHHH
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPP---------KGAWQPSLNISTVL 71 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~---------~e~WsPs~TL~sIL 71 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|++|||||+.+|+||+++|..|. .+.|+|.++|.+||
T Consensus 44 I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL 123 (183)
T 3rz3_A 44 IFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTIL 123 (183)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHH
T ss_pred eeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHH
Confidence 579999999999999999999999999999999999999999999999999995321 27899999999999
Q ss_pred HHHHHhhcCCCCCChhhHHHHHHHHH------CHHHHHHHHHHHHHHHhc
Q 037005 72 TSIGLLLSEPNPDDGLMCEASQEYKY------NRQAFDLKARSMTEKYAK 115 (334)
Q Consensus 72 lsIqsLL~~PnpdsPlN~EAA~lyk~------n~eaF~rkare~tkkyA~ 115 (334)
++|++||.+|++++|+|.+||.+|++ ++++|.++|+++++++..
T Consensus 124 ~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~~ 173 (183)
T 3rz3_A 124 LSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 789999999999998875
No 36
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.98 E-value=6.6e-33 Score=244.99 Aligned_cols=109 Identities=35% Similarity=0.763 Sum_probs=76.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCC---------CCCCCCCCCHHHHH
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPP---------KGAWQPSLNISTVL 71 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~---------~e~WsPs~TL~sIL 71 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+||||||+.+|+||+++|..|. .+.|+|.++|.+||
T Consensus 54 I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL 133 (172)
T 2awf_A 54 IIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIM 133 (172)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHH
T ss_pred EeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHH
Confidence 579999999999999999999999999999999999999999999999999996421 26899999999999
Q ss_pred HHHHHhhcCCCCCChhhHHHHHHHHHCHH-HHHHHHHHH
Q 037005 72 TSIGLLLSEPNPDDGLMCEASQEYKYNRQ-AFDLKARSM 109 (334)
Q Consensus 72 lsIqsLL~~PnpdsPlN~EAA~lyk~n~e-aF~rkare~ 109 (334)
++|++||.+|++++|+|.+||++|++|++ +|.++||++
T Consensus 134 ~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 134 ISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp HHHHHHHSCC-----------------------------
T ss_pred HHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999999999999999999999999 999999875
No 37
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=1e-32 Score=243.63 Aligned_cols=109 Identities=26% Similarity=0.544 Sum_probs=102.3
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEecccccccee-cCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNI-DNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNV-d~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+|||||| +.+|.||+++|.. .+.|+|+++|.+||.+|++||.
T Consensus 59 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~~~WsP~~ti~~vL~sI~sll~ 136 (169)
T 1yrv_A 59 IEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDN--PEKWNTNYTLSSILLALQVMLS 136 (169)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHC--GGGCCTTCCHHHHHHHHHHHHT
T ss_pred EECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcC--CcCCCCcCCHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999999999999 8999999999931 1789999999999999999999
Q ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHH
Q 037005 80 EPNPDDGLMCEASQEYKYNRQAFDLKARSMTEK 112 (334)
Q Consensus 80 ~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkk 112 (334)
+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 137 ~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 137 NPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp SCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 99999999999999999999999998 877753
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=2.9e-32 Score=242.83 Aligned_cols=107 Identities=34% Similarity=0.667 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcCC
Q 037005 2 EGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSEP 81 (334)
Q Consensus 2 ~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~P 81 (334)
.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++| .+.|+|.++|.+||.+|++||.+|
T Consensus 61 igP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL----~~~W~p~~~i~~vL~si~~ll~~P 136 (180)
T 2nvu_C 61 ICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNIL----REDWKPVLTINSIIYGLQYLFLEP 136 (180)
T ss_dssp ECCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGG----TTSCCTTCCHHHHHHHHHHHHHSC
T ss_pred ECCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccc----cccCCCCCCHHHHHHHHHHHHhCC
Confidence 3999999999999999999999999999999999999999999999999999 689999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHCHHHHHHHHHHHHHH
Q 037005 82 NPDDGLMCEASQEYKYNRQAFDLKARSMTEK 112 (334)
Q Consensus 82 npdsPlN~EAA~lyk~n~eaF~rkare~tkk 112 (334)
++++|+|.+||.+|++|+++|.++||+|++.
T Consensus 137 n~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 137 NPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp CTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999874
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=1.4e-31 Score=262.88 Aligned_cols=115 Identities=50% Similarity=0.877 Sum_probs=111.8
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++| .+.|+|.++|.+||.+|++||.+
T Consensus 39 i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il----~~~W~p~~~i~~vL~~i~~ll~~ 114 (399)
T 4ddg_A 39 IMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDIL----RSQWSPALTISKVLLSICSLLCD 114 (399)
T ss_dssp EECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGG----TTSCCTTCCHHHHHHHHHHHHHS
T ss_pred EECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCccc----ccCCCccccHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999999999999999999999999 68999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCC
Q 037005 81 PNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGIG 119 (334)
Q Consensus 81 PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~~ 119 (334)
|++++|+|.+||++|++|+++|.++||+||++||+....
T Consensus 115 pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~v~ 153 (399)
T 4ddg_A 115 PNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGGSA 153 (399)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCTTH
T ss_pred CCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999988664
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=1.3e-31 Score=240.45 Aligned_cols=107 Identities=32% Similarity=0.635 Sum_probs=103.6
Q ss_pred CCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcCCC
Q 037005 3 GPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSEPN 82 (334)
Q Consensus 3 GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~Pn 82 (334)
+|++|||+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++| .+.|+|.++|.+||.+|++||.+|+
T Consensus 71 ~p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL----~~~W~p~~~i~~vL~~i~~ll~~pn 146 (190)
T 3o2u_A 71 RPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNIL----REDWSPALDLQSIITGLLFLFLEPN 146 (190)
T ss_dssp CCSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGG----TTTCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhc----cCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 588999999999999999999999999999999999999999999999999 6899999999999999999999999
Q ss_pred CCChhhHHHHHHHHHCHHHHHHHHHHHHHHH
Q 037005 83 PDDGLMCEASQEYKYNRQAFDLKARSMTEKY 113 (334)
Q Consensus 83 pdsPlN~EAA~lyk~n~eaF~rkare~tkky 113 (334)
+++|+|.+||++|++|+++|.++||+|++.+
T Consensus 147 ~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 147 PNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp TTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred CCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999544
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.96 E-value=2.1e-29 Score=221.00 Aligned_cols=103 Identities=27% Similarity=0.610 Sum_probs=96.7
Q ss_pred CCCCCCCCCC--CCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHH-HHHHh
Q 037005 1 IEGPEGTVYA--KGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLT-SIGLL 77 (334)
Q Consensus 1 I~GP~gTPYE--GGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILl-sIqsL 77 (334)
|.||++|||+ ||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++| .+.|+|++++.++|+ .|+.|
T Consensus 56 i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il----~~~W~p~~~i~~vll~~l~~l 131 (167)
T 4ds2_A 56 VKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMV----NDFWTPDQHASDVIKLVLDRV 131 (167)
T ss_dssp EECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHH----HTTCCTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccC----cCCCCCCCChHHHHHHHHHHH
Confidence 5799999999 9999999999999999999999999999999999999999999 689999999999765 56777
Q ss_pred hcC--CCCCChhhHHHHHHHHHCHHHHHHHHH
Q 037005 78 LSE--PNPDDGLMCEASQEYKYNRQAFDLKAR 107 (334)
Q Consensus 78 L~~--PnpdsPlN~EAA~lyk~n~eaF~rkar 107 (334)
+.. |++++|+|.+||++|++|+++|.++||
T Consensus 132 ~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 132 FSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp HTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred HhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 764 899999999999999999999999997
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.95 E-value=4.2e-29 Score=240.86 Aligned_cols=116 Identities=33% Similarity=0.574 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccc-----cccceecCCCCeeeccCCCCC---CCCCCCCC-CHHHHH
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATP-----IYHPNIDNGGRICLDILNLPP---KGAWQPSL-NISTVL 71 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTp-----IfHPNVd~~G~ICLdiL~~~~---~e~WsPs~-TL~sIL 71 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+ +|||||+.+|+||+++|+.|. .+.|+|.+ +|.+||
T Consensus 116 I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VL 195 (323)
T 3ceg_A 116 ITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVL 195 (323)
T ss_dssp EEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHH
T ss_pred EeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHH
Confidence 579999999999999999999999999999999999 999999999999999997553 26899999 899999
Q ss_pred HHHHHhhc--CCCCCChhhHHH--HHHHHHCHHHHHHHHHHHHHHHhcC
Q 037005 72 TSIGLLLS--EPNPDDGLMCEA--SQEYKYNRQAFDLKARSMTEKYAKT 116 (334)
Q Consensus 72 lsIqsLL~--~PnpdsPlN~EA--A~lyk~n~eaF~rkare~tkkyA~~ 116 (334)
++|++||. +|++++|++.++ +.+|.+|++.|.++|++||++||+.
T Consensus 196 lsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A~~ 244 (323)
T 3ceg_A 196 VSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAML 244 (323)
T ss_dssp HHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHhhH
Confidence 99999996 677799999986 5799999999999999999999974
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.95 E-value=4.8e-29 Score=217.77 Aligned_cols=93 Identities=31% Similarity=0.508 Sum_probs=87.2
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCe---eeccCCCCCCCCCCCCCCHHHHHHHHHHh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRI---CLDILNLPPKGAWQPSLNISTVLTSIGLL 77 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~I---CLdiL~~~~~e~WsPs~TL~sILlsIqsL 77 (334)
|.||++||||||+|+|+|.||++||++||+|+|+|+||||||+.+|+| |+++| . .|+|+++|.+||.+|++|
T Consensus 61 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL----~-~WsP~~ti~~vL~sI~~l 135 (156)
T 2q0v_A 61 IFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHIL----K-NWNRNYTIETILISLRQE 135 (156)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHH----H-TCCTTCCHHHHHHHHHHH
T ss_pred EECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhcccc----c-CCCCcCcHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999 89999 3 599999999999999999
Q ss_pred hcCCCCCChhhHHHHHHHHHC
Q 037005 78 LSEPNPDDGLMCEASQEYKYN 98 (334)
Q Consensus 78 L~~PnpdsPlN~EAA~lyk~n 98 (334)
|.+|++++++|.+||.+|++|
T Consensus 136 l~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 136 MLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TTSTTTTTCCCCCTTCBC---
T ss_pred HhCCCCCCcCChHHHHHhhhC
Confidence 999999999999999998764
No 44
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.94 E-value=2.2e-28 Score=208.60 Aligned_cols=90 Identities=21% Similarity=0.443 Sum_probs=85.3
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCC-CCe--eeccCCCCCCCCCCCCCCHHHHHHHHHHh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNG-GRI--CLDILNLPPKGAWQPSLNISTVLTSIGLL 77 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~-G~I--CLdiL~~~~~e~WsPs~TL~sILlsIqsL 77 (334)
|.||++||||||+|+|+|.||++||++||+|+|.|+||||||+.+ |+| |+++| + .|+|+++|.+||.+|++|
T Consensus 46 i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l----~-~W~p~~~i~~vl~~i~~l 120 (138)
T 1jat_B 46 ILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTL----R-DWKRAYTMETLLLDLRKE 120 (138)
T ss_dssp EECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHH----H-TCCTTCCHHHHHHHHHHH
T ss_pred EECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccC----C-CCCCcCcHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999986 999 99998 3 899999999999999999
Q ss_pred hcCCCCCChhhHHHHHHH
Q 037005 78 LSEPNPDDGLMCEASQEY 95 (334)
Q Consensus 78 L~~PnpdsPlN~EAA~ly 95 (334)
|.+|++++++|.+||.+|
T Consensus 121 l~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 121 MATPANKKLRQPKEGETF 138 (138)
T ss_dssp HTSHHHHTSCCCCTTCBC
T ss_pred HcCCCCCCCCCcchhhcC
Confidence 999999999999987654
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.94 E-value=2e-27 Score=208.77 Aligned_cols=90 Identities=28% Similarity=0.458 Sum_probs=84.2
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceec-CCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNID-NGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd-~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++||||||+|+|+|.||++||++||+|+|+|+||||||+ .+|+||+++|+.+ +.|+|.++|++||++|++||.
T Consensus 65 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~--~~WsP~~ti~~vL~sI~~ll~ 142 (160)
T 2a4d_A 65 IIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL--AKWQNSYSIKVVLQELRRLMM 142 (160)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHH--HTCCTTCCHHHHHHHHHHHHT
T ss_pred EECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCc--cCCCccCcHHHHHHHHHHHHc
Confidence 5799999999999999999999999999999999999999998 6999999999321 789999999999999999995
Q ss_pred -CCCCCChhhHHHH
Q 037005 80 -EPNPDDGLMCEAS 92 (334)
Q Consensus 80 -~PnpdsPlN~EAA 92 (334)
+||+++|+|.|||
T Consensus 143 ~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 143 SKENMKLPQPPEGQ 156 (160)
T ss_dssp STTTTTCCCCCTTC
T ss_pred cCCCCCCCCChhhc
Confidence 6999999999987
No 46
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.93 E-value=1.1e-26 Score=195.09 Aligned_cols=81 Identities=37% Similarity=0.665 Sum_probs=73.0
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEecccc-ccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPI-YHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpI-fHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++||||||+|+++|.||++||++||+|+|.|++ |||||+.+|+||+++| .+.|+|+++|.+||.+|++||.
T Consensus 42 i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL----~~~W~P~~~i~~vl~si~~ll~ 117 (125)
T 2fo3_A 42 YVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLL----GDDYNPSLSISGLVLSIISMLS 117 (125)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGG----TTTCCTTCCHHHHHHHHHHHHC
T ss_pred EeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhc----CCCCCCCCcHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999996 9999999999999999 6899999999999999999999
Q ss_pred CCCCCC
Q 037005 80 EPNPDD 85 (334)
Q Consensus 80 ~Pnpds 85 (334)
+|+.+.
T Consensus 118 ~p~~~~ 123 (125)
T 2fo3_A 118 SAKEKK 123 (125)
T ss_dssp ------
T ss_pred Cccccc
Confidence 988753
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.93 E-value=3.6e-27 Score=208.62 Aligned_cols=90 Identities=28% Similarity=0.458 Sum_probs=84.2
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceec-CCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNID-NGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd-~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++||||||+|+|+|.||++||++||+|+|+|+||||||+ .+|+||+++|+.+ +.|+|+++|.+||++|++||.
T Consensus 75 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~--~~WsP~~ti~~vL~sI~~ll~ 152 (170)
T 2hlw_A 75 IIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL--AKWQNSYSIKVVLQELRRLMM 152 (170)
T ss_dssp ECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHH--HTCCSSCCHHHHHHHHHHHHH
T ss_pred EeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCC--CCCCccCcHHHHHHHHHHHHc
Confidence 6899999999999999999999999999999999999999998 7999999999321 789999999999999999997
Q ss_pred -CCCCCChhhHHHH
Q 037005 80 -EPNPDDGLMCEAS 92 (334)
Q Consensus 80 -~PnpdsPlN~EAA 92 (334)
.||+++|+|.|||
T Consensus 153 ~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 153 SKENMKLPQPPEGQ 166 (170)
T ss_dssp STTTSSSCCCSSCC
T ss_pred cCCCCCCCCCcccc
Confidence 5999999999887
No 48
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.93 E-value=4.3e-26 Score=194.39 Aligned_cols=79 Identities=38% Similarity=0.691 Sum_probs=75.9
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEecccc-ccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhc
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPI-YHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLS 79 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpI-fHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~ 79 (334)
|.||++|||+||+|+|+|.||++||++||+|+|.|++ |||||+.+|+||+++| .+.|+|+++|.+||.+|++||.
T Consensus 56 I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL----~~~WsP~~ti~~vL~si~sll~ 131 (136)
T 2h2y_A 56 YVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVL----GDDYNPSLSISGLILSIISMLS 131 (136)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGG----TTTCCTTCCHHHHHHHHHHHHS
T ss_pred EECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccc----cCCCCCCCcHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999996 9999999999999999 6899999999999999999999
Q ss_pred CCCC
Q 037005 80 EPNP 83 (334)
Q Consensus 80 ~Pnp 83 (334)
+|+.
T Consensus 132 ~p~~ 135 (136)
T 2h2y_A 132 SAKE 135 (136)
T ss_dssp SSCC
T ss_pred CcCc
Confidence 9874
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.92 E-value=2.9e-25 Score=189.98 Aligned_cols=75 Identities=39% Similarity=0.774 Sum_probs=72.4
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccc--cceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIY--HPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLL 78 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIf--HPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL 78 (334)
|.||++||||||+|+|+|.||++||++||+|+|.|++| ||||+.+|+||+++| .+.|+|+++|++||.+|++||
T Consensus 60 I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL----~~~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 60 MEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSIL----TEDWSPALSVQSVCLSIISML 135 (136)
T ss_dssp EECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGG----TTTCCTTSCHHHHHHHHHHHT
T ss_pred EECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhc----CCCCCCCCcHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999 999999999999999 689999999999999999997
Q ss_pred c
Q 037005 79 S 79 (334)
Q Consensus 79 ~ 79 (334)
.
T Consensus 136 ~ 136 (136)
T 2a7l_A 136 S 136 (136)
T ss_dssp C
T ss_pred C
Confidence 3
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.91 E-value=6e-25 Score=196.73 Aligned_cols=110 Identities=31% Similarity=0.629 Sum_probs=84.1
Q ss_pred CCCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhhcC
Q 037005 1 IEGPEGTVYAKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLLSE 80 (334)
Q Consensus 1 I~GP~gTPYEGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL~~ 80 (334)
|.||++|||+||+|+|+|.||++||++||+|+|+|+ ||||+.+|+||+++|++|. +.|+|.++|.+||.+|+.||.+
T Consensus 50 I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~-~~W~P~~ti~~vL~si~sll~~ 126 (187)
T 2f4w_A 50 VRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHP-DTWNPAWSVSTILTGLLSFMVE 126 (187)
T ss_dssp EECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC-----------CCTTCCHHHHHHHHHHHHHS
T ss_pred EeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCc-cCCCCcCcHHHHHHHHHHHhcC
Confidence 579999999999999999999999999999999999 9999999999999996553 7899999999999999999999
Q ss_pred CCCCChh---hHHHHHHHHHCHHHHHHHHHHHHHHH
Q 037005 81 PNPDDGL---MCEASQEYKYNRQAFDLKARSMTEKY 113 (334)
Q Consensus 81 PnpdsPl---N~EAA~lyk~n~eaF~rkare~tkky 113 (334)
|+++.+. .....+.|+.+...|..+.+.+.+.|
T Consensus 127 p~p~~g~~~~~~~~r~~~a~~s~~~~~~~~~f~~~f 162 (187)
T 2f4w_A 127 KGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELF 162 (187)
T ss_dssp CCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHHHC
T ss_pred CCCCCcccccChHHHHHHHHHHHHHhhcCchHHHhh
Confidence 9987552 23344556666666665555544433
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.88 E-value=1.5e-24 Score=194.24 Aligned_cols=103 Identities=17% Similarity=0.439 Sum_probs=88.1
Q ss_pred CCCC-CCCCCCC-----------CEEEEEEEcCCCCCCCCCeeEeccccccc-eecCCCCeeeccCCCCCCCCCCCCCCH
Q 037005 1 IEGP-EGTVYAK-----------GVFEVKIQIPERYPFQPPSVTFATPIYHP-NIDNGGRICLDILNLPPKGAWQPSLNI 67 (334)
Q Consensus 1 I~GP-~gTPYEG-----------GiFkf~I~fP~dYP~kPPkVrFlTpIfHP-NVd~~G~ICLdiL~~~~~e~WsPs~TL 67 (334)
|.|| ++|||+| |+|+|+|.||++||++||+|+|.|++||| ||+.+|.||+++|. .+.|+|+++|
T Consensus 66 I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~---~~~WsP~~ti 142 (186)
T 1zuo_A 66 LQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLT---KQGWSSAYSI 142 (186)
T ss_dssp ECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGS---TTTCCTTSCH
T ss_pred EECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCC---CCCCCCcCcH
Confidence 5797 9999998 89999999999999999999999999999 69999999999994 3689999999
Q ss_pred HHHHHHHHHhhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHHh
Q 037005 68 STVLTSIGLLLSEPNPDDGLMCEASQEYKYNRQAFDLKARSMTEKYA 114 (334)
Q Consensus 68 ~sILlsIqsLL~~PnpdsPlN~EAA~lyk~n~eaF~rkare~tkkyA 114 (334)
.+||++|++||.+|++.. .|..++.+|.++++..+.+.+
T Consensus 143 ~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~~~ 181 (186)
T 1zuo_A 143 ESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYNSI 181 (186)
T ss_dssp HHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHHHH
Confidence 999999999999986543 344456667666666665443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.67 E-value=6.7e-18 Score=150.06 Aligned_cols=85 Identities=21% Similarity=0.337 Sum_probs=70.3
Q ss_pred CCCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeeEeccc-cccceecCCCCeeeccCCCCCCC---CCCCCCC
Q 037005 1 IEGPEGTVYAKG----------VFEVKIQIPERYPFQPPSVTFATP-IYHPNIDNGGRICLDILNLPPKG---AWQPSLN 66 (334)
Q Consensus 1 I~GP~gTPYEGG----------iFkf~I~fP~dYP~kPPkVrFlTp-IfHPNVd~~G~ICLdiL~~~~~e---~WsPs~T 66 (334)
|.||+||+|+|| .|+++|.||++||++||+|+|.+. +||||||.+|+|||++|. +. .|.|.++
T Consensus 62 i~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~---kp~Ws~~~P~~~ 138 (172)
T 2z6o_A 62 ESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHF---KPLWARNVPKFG 138 (172)
T ss_dssp EECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTH---HHHHHHHTTSCC
T ss_pred ecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhc---cccccccCCccC
Confidence 469999999999 999999999999999999999998 999999999999999993 22 4569999
Q ss_pred HHHHHHHHHHhhcCCCCCChhhHHHHHHHH
Q 037005 67 ISTVLTSIGLLLSEPNPDDGLMCEASQEYK 96 (334)
Q Consensus 67 L~sILlsIqsLL~~PnpdsPlN~EAA~lyk 96 (334)
|.++|.- -+..++..|+..+..
T Consensus 139 IahiL~l--------gl~pwla~eip~lv~ 160 (172)
T 2z6o_A 139 LAHLMAL--------GLGPWLAVEIPDLIQ 160 (172)
T ss_dssp HHHHHHH--------THHHHHHHHHHHHHH
T ss_pred HHHHHhh--------ccCchhhhhhHHHHH
Confidence 9999832 223345556655543
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.58 E-value=8.5e-16 Score=135.58 Aligned_cols=79 Identities=32% Similarity=0.530 Sum_probs=71.4
Q ss_pred CCCCCCCCCCCE---EEEEEEcCCCCCCCCCeeEecc-------c---cc-cceecCCCCeeeccCCCCCCCCCCC-CCC
Q 037005 2 EGPEGTVYAKGV---FEVKIQIPERYPFQPPSVTFAT-------P---IY-HPNIDNGGRICLDILNLPPKGAWQP-SLN 66 (334)
Q Consensus 2 ~GP~gTPYEGGi---Fkf~I~fP~dYP~kPPkVrFlT-------p---If-HPNVd~~G~ICLdiL~~~~~e~WsP-s~T 66 (334)
.|+-.++|+||+ |.+.|.||.+||++||.|.|.+ + |+ ||||+.+|+||+++| ..|+| ..+
T Consensus 68 ~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL-----~~W~p~~s~ 142 (162)
T 3r3q_A 68 YGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPIL-----HAWDPAAMN 142 (162)
T ss_dssp EEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGG-----GSCCGGGCC
T ss_pred ECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCccc-----ccCCCCcCc
Confidence 477779999999 8899999999999999998865 1 77 999999999999999 36999 689
Q ss_pred HHHHHHHHHHhhcCCCCCC
Q 037005 67 ISTVLTSIGLLLSEPNPDD 85 (334)
Q Consensus 67 L~sILlsIqsLL~~Pnpds 85 (334)
|.++|.+|+.+|.+|++|.
T Consensus 143 L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 143 LIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp HHHHHHHHHHTTSCCCCCC
T ss_pred HHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999985
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.24 E-value=6.9e-13 Score=116.49 Aligned_cols=67 Identities=31% Similarity=0.592 Sum_probs=56.9
Q ss_pred CCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeeEeccc-cccceecCCCCeeeccCCCCCCCCC---CCCCCH
Q 037005 2 EGPEGTVYAKG----------VFEVKIQIPERYPFQPPSVTFATP-IYHPNIDNGGRICLDILNLPPKGAW---QPSLNI 67 (334)
Q Consensus 2 ~GP~gTPYEGG----------iFkf~I~fP~dYP~kPPkVrFlTp-IfHPNVd~~G~ICLdiL~~~~~e~W---sPs~TL 67 (334)
.||+||+|.|+ .|++.|.||.+||.+||+|+|.+. ++|||+|.+|+|||+++ | ..-| .|.++|
T Consensus 65 sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh--w-kPlW~~n~P~fGi 141 (168)
T 3kpa_A 65 SNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH--F-FPLWARNVPYFGI 141 (168)
T ss_dssp ECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT--H-HHHHHHTTTTCCH
T ss_pred CCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc--c-chhhHhcCCchhH
Confidence 59999999999 999999999999999999999995 89999999999999986 1 1223 345677
Q ss_pred HHHH
Q 037005 68 STVL 71 (334)
Q Consensus 68 ~sIL 71 (334)
...|
T Consensus 142 ahal 145 (168)
T 3kpa_A 142 SHVL 145 (168)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.13 E-value=4.3e-11 Score=103.97 Aligned_cols=68 Identities=19% Similarity=0.537 Sum_probs=60.3
Q ss_pred CCCCCCEEEE--EEEcCCCCCCCCCeeEeccc------cccceecCCCCeeeccCCCCCCCCCCC-CCCHHHHHHHHHHh
Q 037005 7 TVYAKGVFEV--KIQIPERYPFQPPSVTFATP------IYHPNIDNGGRICLDILNLPPKGAWQP-SLNISTVLTSIGLL 77 (334)
Q Consensus 7 TPYEGGiFkf--~I~fP~dYP~kPPkVrFlTp------IfHPNVd~~G~ICLdiL~~~~~e~WsP-s~TL~sILlsIqsL 77 (334)
.+|+|++|.+ .|.||.+||++||.| |.++ .+||||+.+|+||++.| .+|.+ ..+|.+++..|+.+
T Consensus 62 v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL-----~~W~~~~snL~~ll~~l~~~ 135 (146)
T 3obq_A 62 VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYL-----HEWKHPQSDLLGLIQVMIVV 135 (146)
T ss_dssp EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHH-----HTCCTTTCCHHHHHHHHHHH
T ss_pred eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccc-----cccCCCCCCHHHHHHHHHHH
Confidence 4799999995 899999999999999 7777 58999999999999999 35977 78999999999988
Q ss_pred hcC
Q 037005 78 LSE 80 (334)
Q Consensus 78 L~~ 80 (334)
|.+
T Consensus 136 F~~ 138 (146)
T 3obq_A 136 FGD 138 (146)
T ss_dssp HHH
T ss_pred Hhh
Confidence 853
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.36 E-value=1.3 Score=35.71 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=21.0
Q ss_pred CCEEEEEEEcCCCCCCCCCeeEecc
Q 037005 11 KGVFEVKIQIPERYPFQPPSVTFAT 35 (334)
Q Consensus 11 GGiFkf~I~fP~dYP~kPPkVrFlT 35 (334)
.-.+.+.|.||++||..||.+...+
T Consensus 54 ~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 54 TVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred ceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3478899999999999999987644
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=82.10 E-value=0.9 Score=36.74 Aligned_cols=25 Identities=28% Similarity=0.752 Sum_probs=21.4
Q ss_pred CEEEEEEEcCCCCCCCCCeeEeccc
Q 037005 12 GVFEVKIQIPERYPFQPPSVTFATP 36 (334)
Q Consensus 12 GiFkf~I~fP~dYP~kPPkVrFlTp 36 (334)
-.+.+.|.+|++||..+|.|...+.
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4678889999999999999987653
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=82.02 E-value=1 Score=36.99 Aligned_cols=24 Identities=17% Similarity=0.592 Sum_probs=20.4
Q ss_pred CEEEEEEEcCCCCCCCCCeeEecc
Q 037005 12 GVFEVKIQIPERYPFQPPSVTFAT 35 (334)
Q Consensus 12 GiFkf~I~fP~dYP~kPPkVrFlT 35 (334)
-.+.+.|.+|++||..||.|...+
T Consensus 62 ~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 62 SSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CEEEEEEECCSSTTSSCCEEEEEC
T ss_pred eEEEEEEECCCCCCCCCCeEEEec
Confidence 467888999999999999998654
No 59
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=78.41 E-value=1.1 Score=36.51 Aligned_cols=23 Identities=22% Similarity=0.492 Sum_probs=20.0
Q ss_pred CEEEEEEEcCCCCCCCCCeeEec
Q 037005 12 GVFEVKIQIPERYPFQPPSVTFA 34 (334)
Q Consensus 12 GiFkf~I~fP~dYP~kPPkVrFl 34 (334)
-.+.+.|.||++||..||.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 46889999999999999999764
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.60 E-value=1.2 Score=36.19 Aligned_cols=23 Identities=22% Similarity=0.459 Sum_probs=19.5
Q ss_pred CEEEEEEEcCCCCCCCCCeeEec
Q 037005 12 GVFEVKIQIPERYPFQPPSVTFA 34 (334)
Q Consensus 12 GiFkf~I~fP~dYP~kPPkVrFl 34 (334)
-.+.+.|.+|.+||..||.|...
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 36888999999999999998644
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=76.20 E-value=7 Score=34.94 Aligned_cols=51 Identities=12% Similarity=0.378 Sum_probs=40.3
Q ss_pred CCCEEEEEEEcCCCCCCCCCeeEeccccccceecCCCCeeeccCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 037005 10 AKGVFEVKIQIPERYPFQPPSVTFATPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLLL 78 (334)
Q Consensus 10 EGGiFkf~I~fP~dYP~kPPkVrFlTpIfHPNVd~~G~ICLdiL~~~~~e~WsPs~TL~sILlsIqsLL 78 (334)
.|....++|.++.+||.+||.+...-|+- + .-.|.|..+|.+++...+..+
T Consensus 36 ~gR~H~l~v~l~~~yp~~~P~~~~DlP~~--------------~----~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 36 SGREHLITLKLKAKYPAESPDYFVDFPVP--------------F----CASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp TSCEEEEEEECCTTTTTSCCEEECCCSSC--------------C----CCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEEECCCCCCCCCeeEEcCCCC--------------c----ccccCCCccHHHHHHHHHHHH
Confidence 46778889999999999999887665541 0 237999999999988887666
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=75.52 E-value=1.8 Score=36.32 Aligned_cols=23 Identities=26% Similarity=0.582 Sum_probs=19.7
Q ss_pred EEEEEEEcCCCCCCCCCeeEecc
Q 037005 13 VFEVKIQIPERYPFQPPSVTFAT 35 (334)
Q Consensus 13 iFkf~I~fP~dYP~kPPkVrFlT 35 (334)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 57788999999999999997554
No 63
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=72.88 E-value=2.8 Score=35.52 Aligned_cols=23 Identities=13% Similarity=0.452 Sum_probs=20.1
Q ss_pred EEEEEEEcCCCCCCCCCeeEecc
Q 037005 13 VFEVKIQIPERYPFQPPSVTFAT 35 (334)
Q Consensus 13 iFkf~I~fP~dYP~kPPkVrFlT 35 (334)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78899999999999999997544
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=71.59 E-value=0.81 Score=37.78 Aligned_cols=37 Identities=5% Similarity=-0.110 Sum_probs=0.0
Q ss_pred CCChhhHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCC
Q 037005 83 PDDGLMCEASQEYKYNRQAFDLKARSMTEKYAKTGIG 119 (334)
Q Consensus 83 pdsPlN~EAA~lyk~n~eaF~rkare~tkkyA~~~~~ 119 (334)
...|.+.+.|++|.++++.|...|+.|+.-||.+...
T Consensus 23 ~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~~~~~ 59 (108)
T 2cwb_A 23 TTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFT 59 (108)
T ss_dssp -------------------------------------
T ss_pred cCCchhHHHHHHHHhchhccccccccccccCcCCCCC
Confidence 4568999999999999999999999999888865443
Done!