Query 037006
Match_columns 541
No_of_seqs 481 out of 3156
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 12:36:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 5.4E-62 1.9E-66 503.2 44.7 380 134-519 12-403 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 3.3E-58 1.1E-62 474.9 43.9 356 122-483 30-400 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 4.7E-51 1.6E-55 406.5 35.3 296 171-488 23-329 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 8.6E-48 2.9E-52 383.0 35.2 292 133-456 22-330 (337)
5 1wdy_A 2-5A-dependent ribonucl 100.0 4.3E-47 1.5E-51 368.0 33.8 270 171-457 3-283 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 7.9E-47 2.7E-51 377.7 33.9 312 135-485 23-334 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 2.9E-46 9.9E-51 362.2 33.4 262 207-490 5-283 (285)
8 2fo1_E LIN-12 protein; beta-ba 100.0 7.2E-47 2.5E-51 381.3 20.8 312 139-486 40-372 (373)
9 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-45 4.1E-50 369.1 29.2 291 209-500 26-320 (351)
10 2fo1_E LIN-12 protein; beta-ba 100.0 6.6E-45 2.3E-49 366.9 20.2 281 139-453 69-372 (373)
11 3d9h_A CDNA FLJ77766, highly s 100.0 9.4E-44 3.2E-48 344.9 25.4 256 170-485 12-279 (285)
12 3d9h_A CDNA FLJ77766, highly s 100.0 1E-43 3.5E-48 344.7 25.3 250 207-515 15-275 (285)
13 2xai_A ASB-9, ankyrin repeat a 100.0 2.7E-43 9.1E-48 337.3 23.6 249 207-481 3-259 (261)
14 3ljn_A Hypothetical protein; a 100.0 1.9E-44 6.5E-49 362.8 15.0 272 166-485 13-314 (364)
15 3ljn_A Hypothetical protein; a 100.0 6.7E-44 2.3E-48 358.8 13.7 276 134-454 18-316 (364)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 3.1E-42 1.1E-46 328.4 24.5 212 250-483 33-246 (253)
17 2xai_A ASB-9, ankyrin repeat a 100.0 3E-42 1E-46 330.0 22.7 250 172-448 2-259 (261)
18 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-41 5.2E-46 320.9 22.8 229 234-484 3-240 (241)
19 3b7b_A Euchromatic histone-lys 100.0 1.2E-40 4E-45 314.1 27.5 227 232-480 3-230 (237)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 4.6E-41 1.6E-45 320.3 23.5 243 166-451 3-247 (253)
21 1oy3_D Transcription factor in 100.0 3.4E-41 1.2E-45 326.3 22.4 263 166-471 2-269 (282)
22 3aji_A 26S proteasome non-ATPa 100.0 2.5E-40 8.6E-45 310.5 24.6 224 240-485 6-230 (231)
23 1k1a_A B-cell lymphoma 3-encod 100.0 2.3E-40 7.8E-45 312.8 23.2 230 167-451 3-240 (241)
24 4b93_B Ankyrin repeat domain-c 100.0 1.9E-41 6.4E-46 325.1 15.8 228 240-489 11-248 (269)
25 3b7b_A Euchromatic histone-lys 100.0 8.3E-40 2.8E-44 308.3 26.9 227 166-448 4-231 (237)
26 1oy3_D Transcription factor in 100.0 1.9E-40 6.5E-45 321.0 21.7 261 207-508 9-273 (282)
27 1s70_B 130 kDa myosin-binding 100.0 3.3E-40 1.1E-44 322.4 22.5 245 207-481 40-286 (299)
28 3aji_A 26S proteasome non-ATPa 100.0 6.8E-40 2.3E-44 307.6 23.4 223 209-453 8-231 (231)
29 4b93_B Ankyrin repeat domain-c 100.0 6.1E-41 2.1E-45 321.5 15.9 239 168-454 6-246 (269)
30 3eu9_A Huntingtin-interacting 100.0 2.3E-39 7.8E-44 305.4 26.0 232 234-486 3-236 (240)
31 3kea_A K1L; tropism, ANK repea 100.0 3.5E-40 1.2E-44 319.6 18.0 237 220-490 13-251 (285)
32 2f8y_A Notch homolog 1, transl 100.0 6.6E-39 2.3E-43 299.1 22.8 214 251-486 2-217 (223)
33 3eu9_A Huntingtin-interacting 100.0 3E-38 1E-42 297.8 27.1 233 168-454 4-237 (240)
34 3kea_A K1L; tropism, ANK repea 100.0 1.3E-39 4.3E-44 315.7 18.0 241 145-456 8-250 (285)
35 2dzn_A Probable 26S proteasome 100.0 9.1E-39 3.1E-43 299.2 22.7 219 240-482 2-227 (228)
36 2f8y_A Notch homolog 1, transl 100.0 1.8E-38 6.2E-43 296.1 22.9 215 218-454 2-218 (223)
37 1s70_B 130 kDa myosin-binding 100.0 1.1E-38 3.8E-43 311.5 19.3 276 142-449 4-286 (299)
38 2dzn_A Probable 26S proteasome 100.0 4.6E-38 1.6E-42 294.4 22.1 221 173-449 2-227 (228)
39 1sw6_A Regulatory protein SWI6 100.0 1.7E-40 5.9E-45 328.3 5.5 273 183-471 29-327 (327)
40 1sw6_A Regulatory protein SWI6 100.0 6.6E-39 2.2E-43 317.0 6.7 249 151-438 34-327 (327)
41 2rfa_A Transient receptor pote 100.0 3.5E-36 1.2E-40 282.5 21.7 206 240-487 3-224 (232)
42 1ikn_D Protein (I-kappa-B-alph 100.0 4.3E-37 1.5E-41 289.6 9.4 201 236-485 4-209 (236)
43 2rfa_A Transient receptor pote 100.0 6.7E-35 2.3E-39 273.7 22.3 211 173-422 3-225 (232)
44 1ikn_D Protein (I-kappa-B-alph 100.0 1.9E-36 6.3E-41 285.2 11.0 208 305-533 6-224 (236)
45 3hra_A Ankyrin repeat family p 100.0 3.3E-34 1.1E-38 262.7 24.6 189 273-483 5-201 (201)
46 4gpm_A Engineered protein OR26 100.0 1.2E-34 4E-39 256.9 20.6 158 309-487 6-163 (169)
47 3hra_A Ankyrin repeat family p 100.0 6.5E-34 2.2E-38 260.7 24.9 191 238-450 3-201 (201)
48 2etb_A Transient receptor pote 100.0 2.4E-35 8.2E-40 281.2 15.5 206 240-486 2-247 (256)
49 4gpm_A Engineered protein OR26 100.0 6.4E-34 2.2E-38 252.2 20.7 159 275-455 6-164 (169)
50 2pnn_A Transient receptor pote 100.0 5E-35 1.7E-39 281.8 14.3 213 231-464 4-271 (273)
51 2pnn_A Transient receptor pote 100.0 7.1E-35 2.4E-39 280.7 14.2 205 263-488 3-262 (273)
52 2etb_A Transient receptor pote 100.0 3.1E-33 1E-37 266.6 15.2 209 173-418 2-245 (256)
53 3jxi_A Vanilloid receptor-rela 100.0 4.5E-33 1.6E-37 266.0 15.5 160 307-487 46-252 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 9.5E-33 3.3E-37 263.8 14.3 195 239-455 4-253 (260)
55 2aja_A Ankyrin repeat family p 100.0 9.3E-36 3.2E-40 297.4 -7.1 285 138-481 67-370 (376)
56 4hbd_A KN motif and ankyrin re 100.0 1.1E-31 3.7E-36 258.6 14.1 191 276-483 79-273 (276)
57 4hbd_A KN motif and ankyrin re 100.0 1.8E-31 6.2E-36 257.1 14.2 186 243-450 79-273 (276)
58 2rfm_A Putative ankyrin repeat 100.0 1.5E-30 5E-35 236.7 17.5 158 305-483 33-190 (192)
59 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.3E-30 1.1E-34 229.2 19.4 158 305-483 12-169 (169)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.4E-30 4.9E-35 229.7 16.6 157 307-485 5-162 (162)
61 2rfm_A Putative ankyrin repeat 100.0 3E-30 1E-34 234.6 18.5 163 166-330 28-190 (192)
62 3v30_A DNA-binding protein rfx 100.0 1.5E-30 5.2E-35 232.1 15.8 167 275-463 4-171 (172)
63 3v31_A Ankyrin repeat family A 100.0 3.6E-30 1.2E-34 228.4 17.8 159 306-485 2-160 (167)
64 3v30_A DNA-binding protein rfx 100.0 3.9E-30 1.3E-34 229.4 16.9 169 173-343 2-171 (172)
65 2vge_A RELA-associated inhibit 100.0 4.2E-33 1.4E-37 260.5 -4.6 200 189-412 1-206 (229)
66 2aja_A Ankyrin repeat family p 100.0 1.8E-33 6.2E-38 280.8 -7.5 272 173-511 65-367 (376)
67 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.2E-29 7.7E-34 223.8 19.8 160 169-330 10-169 (169)
68 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.5E-29 5E-34 223.2 17.3 158 172-332 4-162 (162)
69 3v31_A Ankyrin repeat family A 100.0 2E-29 7E-34 223.6 18.3 159 172-332 2-160 (167)
70 3f6q_A Integrin-linked protein 100.0 1.5E-29 5.2E-34 227.2 17.0 166 306-492 4-170 (179)
71 1awc_B Protein (GA binding pro 100.0 3.4E-29 1.2E-33 218.7 17.5 149 309-479 4-152 (153)
72 2vge_A RELA-associated inhibit 100.0 1.9E-32 6.4E-37 256.1 -4.2 182 274-480 22-208 (229)
73 3twr_A Tankyrase-2; ankyrin re 100.0 2.1E-29 7.1E-34 223.1 13.9 157 306-484 7-164 (165)
74 3f6q_A Integrin-linked protein 100.0 9.9E-29 3.4E-33 221.9 16.9 167 172-340 4-171 (179)
75 1awc_B Protein (GA binding pro 100.0 2.4E-28 8.4E-33 213.3 18.5 150 174-326 3-152 (153)
76 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.5E-28 8.4E-33 213.9 17.5 153 307-482 2-155 (156)
77 3twr_A Tankyrase-2; ankyrin re 100.0 1.6E-28 5.4E-33 217.4 14.5 159 170-331 5-164 (165)
78 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.3E-29 7.7E-34 237.1 8.1 180 171-352 3-193 (239)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 5.3E-29 1.8E-33 234.6 9.4 111 377-487 53-166 (239)
80 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.8E-27 6.1E-32 208.4 17.7 151 174-328 3-154 (156)
81 1d9s_A Cyclin-dependent kinase 99.9 3E-27 1E-31 202.0 13.0 134 330-485 2-136 (136)
82 1d9s_A Cyclin-dependent kinase 99.9 2.1E-26 7.3E-31 196.6 14.0 133 297-452 3-136 (136)
83 3t8k_A Uncharacterized protein 99.9 1.9E-27 6.3E-32 214.2 7.6 167 274-457 7-184 (186)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 1E-26 3.4E-31 203.7 11.7 141 305-467 10-151 (156)
85 3t8k_A Uncharacterized protein 99.9 2.6E-27 9E-32 213.2 8.1 159 307-484 6-178 (186)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 4.2E-26 1.4E-30 199.7 11.2 142 168-312 7-149 (156)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.9E-25 3.1E-29 183.5 16.1 126 339-485 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-24 5.8E-29 184.8 15.9 115 369-483 22-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.5E-24 8.5E-29 180.8 16.1 126 172-298 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-24 5.4E-29 184.9 14.5 126 170-296 11-136 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.3E-25 7.9E-30 190.4 8.9 134 330-485 1-134 (137)
92 3deo_A Signal recognition part 99.9 3.1E-25 1.1E-29 199.7 3.9 140 238-416 42-181 (183)
93 3deo_A Signal recognition part 99.9 1.6E-23 5.5E-28 188.4 11.5 139 171-329 42-181 (183)
94 3aaa_C Myotrophin, protein V-1 99.9 2.2E-23 7.7E-28 174.4 10.8 116 337-473 4-119 (123)
95 3ui2_A Signal recognition part 99.9 2.5E-23 8.6E-28 196.2 12.1 140 239-417 44-183 (244)
96 3ui2_A Signal recognition part 99.9 2.6E-23 9E-28 196.1 12.1 142 171-332 43-185 (244)
97 3c5r_A BARD-1, BRCA1-associate 99.9 2.6E-23 8.8E-28 177.6 10.3 123 235-358 5-127 (137)
98 3ehr_A Osteoclast-stimulating 99.9 1.3E-23 4.6E-28 195.2 9.1 135 336-491 69-204 (222)
99 2b0o_E UPLC1; arfgap, structur 99.9 3.1E-23 1.1E-27 201.5 11.3 141 309-473 153-299 (301)
100 1dcq_A PYK2-associated protein 99.9 6.7E-22 2.3E-26 189.9 19.0 122 365-486 134-264 (278)
101 3aaa_C Myotrophin, protein V-1 99.9 1E-22 3.5E-27 170.4 11.1 112 170-282 4-115 (123)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.6E-22 8.9E-27 158.9 12.4 93 393-485 1-93 (93)
103 3ehr_A Osteoclast-stimulating 99.9 6.5E-23 2.2E-27 190.6 9.5 133 307-460 73-206 (222)
104 2b0o_E UPLC1; arfgap, structur 99.9 2.3E-22 7.8E-27 195.4 13.4 140 207-353 151-299 (301)
105 1dcq_A PYK2-associated protein 99.9 9.8E-22 3.3E-26 188.7 15.5 128 308-453 131-264 (278)
106 3lvq_E ARF-GAP with SH3 domain 99.9 1.9E-21 6.5E-26 202.8 15.5 125 365-489 136-269 (497)
107 3lvq_E ARF-GAP with SH3 domain 99.9 3.2E-21 1.1E-25 201.0 15.5 137 309-469 134-276 (497)
108 3jue_A Arfgap with coiled-coil 99.9 3.5E-21 1.2E-25 191.3 13.8 144 306-470 198-347 (368)
109 3jue_A Arfgap with coiled-coil 99.8 5.7E-21 1.9E-25 189.8 13.6 146 171-316 197-346 (368)
110 2l6b_A NR1C; ankyrin, consensu 99.8 4.8E-21 1.6E-25 158.1 7.6 108 389-496 4-111 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.8E-20 2E-24 145.2 12.5 91 207-297 2-92 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-20 3.8E-25 155.9 7.9 109 335-464 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 7.4E-19 2.5E-23 143.6 11.0 93 387-479 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 7.5E-17 2.6E-21 131.5 10.5 92 167-259 18-109 (110)
115 2cri_A Vesicle-associated memb 99.5 1.1E-13 3.6E-18 117.5 10.0 122 1-136 11-132 (147)
116 1z9l_A Vesicle-associated memb 99.5 1.8E-13 6.3E-18 113.5 9.4 93 2-99 8-100 (128)
117 1wic_A Hypothetical protein ri 99.4 1.6E-13 5.4E-18 116.6 7.9 89 2-98 16-104 (152)
118 1msp_A MSP, major sperm protei 99.3 4E-12 1.4E-16 104.5 8.7 106 3-120 7-112 (126)
119 1row_A SSP-19, MSP-domain prot 99.1 1.8E-10 6.2E-15 91.3 6.9 82 5-100 3-84 (109)
120 1m1s_A WR4; structural genomic 99.0 3E-10 1E-14 90.3 7.0 83 4-100 10-92 (116)
121 3qbt_B Inositol polyphosphate 89.2 1.1 3.8E-05 36.8 7.2 66 6-73 28-100 (140)
122 2ys4_A Hydrocephalus-inducing 87.6 0.81 2.8E-05 36.6 5.3 51 19-72 39-89 (122)
123 3qis_A Inositol polyphosphate 84.5 2.1 7.3E-05 41.5 7.5 68 5-74 30-104 (366)
124 2e6j_A Hydin protein; PAPD, st 81.0 2.3 8E-05 33.1 5.2 54 18-72 23-79 (112)
125 3mkq_B Coatomer subunit alpha; 60.9 31 0.0011 29.2 7.8 128 139-294 11-139 (177)
126 4g26_A Pentatricopeptide repea 60.6 23 0.00079 35.8 8.4 31 288-321 92-122 (501)
127 4g26_A Pentatricopeptide repea 44.2 34 0.0011 34.6 6.4 103 321-446 91-197 (501)
128 3mkq_B Coatomer subunit alpha; 34.1 2.1E+02 0.0072 24.1 9.9 101 366-485 42-144 (177)
129 4h4n_A Hypothetical protein BA 26.4 22 0.00076 23.2 1.0 23 31-53 2-24 (67)
130 3zrh_A Ubiquitin thioesterase 25.5 1.6E+02 0.0055 28.5 7.0 61 248-328 30-90 (454)
131 1gp8_A Protein (scaffolding pr 22.9 59 0.002 19.5 2.2 16 177-192 17-32 (40)
132 3q48_A Chaperone CUPB2; IG fol 20.9 2.4E+02 0.0083 25.3 7.2 58 13-72 35-102 (257)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.4e-62 Score=503.22 Aligned_cols=380 Identities=28% Similarity=0.385 Sum_probs=359.8
Q ss_pred ecCcHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHH
Q 037006 134 FVGSPVLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEA 213 (541)
Q Consensus 134 ~~g~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~ 213 (541)
..|.|+|+.|+..|+.++|++|++++.. .+..+..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~----~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~ 86 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGAS----PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKD-DQTPLHC 86 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCC----SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT-SCCHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCCHHHH
Confidence 3578999999999999999999998642 5678889999999999999999999999999999988877 8999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHH
Q 037006 214 AAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLL 293 (541)
Q Consensus 214 A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 293 (541)
|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+++++..+..|.||||+|+..|+.+++++|+
T Consensus 87 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 166 (437)
T 1n11_A 87 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL 166 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhc------------
Q 037006 294 ANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKL------------ 361 (541)
Q Consensus 294 ~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~------------ 361 (541)
++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|..
T Consensus 167 ~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 245 (437)
T 1n11_A 167 ERDAHPNAAG-KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG 245 (437)
T ss_dssp HTTCCTTCCC-SSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred hCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 9999999887 789999999999999999999999999999999999999999999999999999843
Q ss_pred CCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHH
Q 037006 362 GDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTD 441 (541)
Q Consensus 362 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~ 441 (541)
.++++.|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 325 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK 325 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSH
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCcccccchhhhhhcCCCccccccccccCccc
Q 037006 442 VTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGIQQTNLRQVSIQFGNGKVGRDQMEGKFGMKK 519 (541)
Q Consensus 442 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (541)
+|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+++.++...++..+.+++.......
T Consensus 326 ~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~~~ 403 (437)
T 1n11_A 326 LVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDET 403 (437)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCC
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999988887776655433
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-58 Score=474.89 Aligned_cols=356 Identities=31% Similarity=0.439 Sum_probs=337.4
Q ss_pred hhhhhhcCCceee---cCcHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC
Q 037006 122 KQVFIDSGIKIMF---VGSPVLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPD 198 (541)
Q Consensus 122 ~~~~~~~~~~~~~---~g~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (541)
.+.+++.|.++.. .|.|+|+.|+..|+.+++++|++.+.. ++.+|..|.||||+|+..|+.++|++|+++|++
T Consensus 30 v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 105 (437)
T 1n11_A 30 VKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK----VNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN 105 (437)
T ss_dssp HHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC----SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCC
Confidence 3567777776653 478999999999999999999998743 677889999999999999999999999999999
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHH
Q 037006 199 VESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALH 278 (541)
Q Consensus 199 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~ 278 (541)
++..+.. |.||||+|+..|+.+++++|++++++.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus 106 ~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 184 (437)
T 1n11_A 106 PNLATTA-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLH 184 (437)
T ss_dssp TTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHH
T ss_pred CCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 9988877 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHH
Q 037006 279 LAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDA 358 (541)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~ 358 (541)
+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++
T Consensus 185 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 263 (437)
T 1n11_A 185 VAVHHNNLDIVKLLLPRGGSPHSPA-WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 263 (437)
T ss_dssp HHHHTTCHHHHHHHGGGTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 9999999999999999999998876 789999999999999999999999999999999999999999999999999999
Q ss_pred hhc------------CCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC
Q 037006 359 LKL------------GDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDED 426 (541)
Q Consensus 359 l~~------------~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~ 426 (541)
|.. .++++.|+..|+.+++++|+++|++++.++..|+||||+|+..|+.++|++|+++|+++|.+|..
T Consensus 264 Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~ 343 (437)
T 1n11_A 264 LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL 343 (437)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTT
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCC
Confidence 843 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q 037006 427 GYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGG 483 (541)
Q Consensus 427 g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 483 (541)
|+||||+|+..|+.++|++|+++|++++.+|..|+||+++|...|+.+++++|....
T Consensus 344 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 344 GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999998654
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.7e-51 Score=406.54 Aligned_cols=296 Identities=30% Similarity=0.355 Sum_probs=272.8
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhc
Q 037006 171 AQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRG 250 (541)
Q Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~ 250 (541)
.+|.|+||.||..|+.++|++||++|++++.++...|.||||+|+..|+.++|++|+++|++++..+..+.++++.++..
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 45789999999999999999999999999988877689999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccC---------CCCCCcHHHHHHHcCCHH
Q 037006 251 GHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRN---------ARDGDTPLHITASLGYEQ 321 (541)
Q Consensus 251 g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---------~~~g~t~L~~A~~~g~~~ 321 (541)
++..++..++..+++++..|..|.|||++|+..|+.+++++|+++|++++... ...|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999999999999999987543 245899999999999999
Q ss_pred HHHHHHH-cCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHH
Q 037006 322 MVKLLLQ-KGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHR 400 (541)
Q Consensus 322 ~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~ 400 (541)
++++|++ .|++++..|..|.|+++.++..++.. +...++++|+++|+++|.+|..|+||||+
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~-----------------~~~~i~~lLl~~gad~n~~d~~g~t~L~~ 245 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDS-----------------DVEAITHLLLDHGADVNVRGERGKTPLIL 245 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTT-----------------THHHHHHHHHHTTCCTTCCCGGGCCHHHH
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcc-----------------cHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 9999996 69999999999999999887655432 12346889999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHH
Q 037006 401 ASFKGKIEVVRMLIDK-GIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRIL 479 (541)
Q Consensus 401 Aa~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 479 (541)
|+..|+.+++++|++. |+++|.+|..|+||||+|++.|+.++|++|+++||++|.+ +||++|+..|+.+++++|
T Consensus 246 a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~L 320 (337)
T 4g8k_A 246 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVL 320 (337)
T ss_dssp HHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHH
T ss_pred HHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHH
Confidence 9999999999999986 8999999999999999999999999999999999999764 699999999999999999
Q ss_pred HhCCCCCCC
Q 037006 480 MHGGATKDG 488 (541)
Q Consensus 480 l~~ga~~~~ 488 (541)
+++||+++.
T Consensus 321 l~~GA~~d~ 329 (337)
T 4g8k_A 321 LSHGAKEDF 329 (337)
T ss_dssp HHTTCCC--
T ss_pred HHCcCCCCC
Confidence 999999874
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.6e-48 Score=382.98 Aligned_cols=292 Identities=29% Similarity=0.360 Sum_probs=263.3
Q ss_pred eecCcHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC-CCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHH
Q 037006 133 MFVGSPVLVLLVKDGEMDDLREVLERSDPAWNPADSADA-QGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPL 211 (541)
Q Consensus 133 ~~~g~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L 211 (541)
...|.++|+.||+.|+.++|+.||+++.. ++.++. .|+||||+||..|+.++|++|+++|++++..+.. +.+++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gad----vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~-~~~~~ 96 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGAN----VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN-GATPF 96 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCC----CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccC-CCchh
Confidence 34577899999999999999999998742 555654 5999999999999999999999999999998887 89999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCC----------CCCCChHHHHHH
Q 037006 212 EAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNAL----------TKDGNTALHLAV 281 (541)
Q Consensus 212 ~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~----------d~~g~t~L~~A~ 281 (541)
+.++..+...++..+++.+++++..+..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred HHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988754 456899999999
Q ss_pred HhCCHHHHHHHHH-CCCCCCccCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHH
Q 037006 282 EDRRRDCARLLLA-NGARPDIRNARDGDTPLHITASLGY----EQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLF 356 (541)
Q Consensus 282 ~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~ 356 (541)
..|+.++|++|++ .|++++..+ ..|.|+++.++..+. ..++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d-~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~- 254 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL- 254 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCC-TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHH-
T ss_pred HCCCHHHHHHHHhccCCCcCccC-CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHH-
Confidence 9999999999995 699999887 789999998886544 468999999999999999999999999988777665
Q ss_pred HHhhcCCchHHHHhhCCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 037006 357 DALKLGDSLCVAARKGEVRTMQRLIE-AGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAV 435 (541)
Q Consensus 357 ~~l~~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 435 (541)
+++|++ .|++++.+|.+|+||||+|+..|+.++|++|+++|+|+|.+ +|||+|+
T Consensus 255 --------------------v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~ 309 (337)
T 4g8k_A 255 --------------------VQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTAR 309 (337)
T ss_dssp --------------------HHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHH
T ss_pred --------------------HHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHH
Confidence 566676 48999999999999999999999999999999999999865 5999999
Q ss_pred HcCCHHHHHHHHHCCCCCccc
Q 037006 436 ESGHTDVTELLVKKGADVEAR 456 (541)
Q Consensus 436 ~~g~~~~v~~Ll~~ga~~~~~ 456 (541)
++|+.++|++||++||++|..
T Consensus 310 ~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 310 RNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HTTCHHHHHHHHHTTCCC---
T ss_pred HcCCHHHHHHHHHCcCCCCCC
Confidence 999999999999999999863
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-47 Score=367.98 Aligned_cols=270 Identities=31% Similarity=0.374 Sum_probs=229.7
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhc
Q 037006 171 AQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRG 250 (541)
Q Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~ 250 (541)
.+|.|+||+|+..|+.++|++|++.|++++......|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 35789999999999999999999999999888555689999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccC---------CCCCCcHHHHHHHcCCHH
Q 037006 251 GHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRN---------ARDGDTPLHITASLGYEQ 321 (541)
Q Consensus 251 g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---------~~~g~t~L~~A~~~g~~~ 321 (541)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.|++++... +..|.||||+|+..|+.+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999988763 356888888888888888
Q ss_pred HHHHHHHc-CCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHH
Q 037006 322 MVKLLLQK-GANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHR 400 (541)
Q Consensus 322 ~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~ 400 (541)
++++|++. |++++..+..|.||+|+|+..++.+.+ .+++++|+++|++++.++..|+||||+
T Consensus 163 ~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~-----------------~~i~~~Ll~~g~~~~~~~~~g~t~L~~ 225 (285)
T 1wdy_A 163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV-----------------EAITHLLLDHGADVNVRGERGKTPLIL 225 (285)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTH-----------------HHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchH-----------------HHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 88888886 888888888888888887776663211 345777778888888777788888888
Q ss_pred HHhcCCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccC
Q 037006 401 ASFKGKIEVVRMLID-KGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEART 457 (541)
Q Consensus 401 Aa~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 457 (541)
|+..|+.+++++|++ .|++++.+|..|+||||+|++.|+.+++++|+++|++++.+|
T Consensus 226 A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred HHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 888888888888887 678888888888888888888888888888888888877766
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.9e-47 Score=377.70 Aligned_cols=312 Identities=26% Similarity=0.321 Sum_probs=286.3
Q ss_pred cCcHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHH
Q 037006 135 VGSPVLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAA 214 (541)
Q Consensus 135 ~g~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A 214 (541)
.+.++|+.|++.|+.+.+++++..... .++..|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A 98 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNV---NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG-GLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTT---TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCC---CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCcHHHHH
Confidence 356899999999999999999987543 36778899999999999999999999999999999998876 99999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHH
Q 037006 215 AAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLA 294 (541)
Q Consensus 215 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 294 (541)
+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.+.+...
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888764
Q ss_pred CCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCH
Q 037006 295 NGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEV 374 (541)
Q Consensus 295 ~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~ 374 (541)
.+++..++..++.+.++.++..+......+..|.||||+|+..++. +..
T Consensus 179 -------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~------------------~~~ 227 (351)
T 3utm_A 179 -------------GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHP------------------KRK 227 (351)
T ss_dssp -------------HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCST------------------THH
T ss_pred -------------ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCc------------------cHH
Confidence 2578889999999999999988877777888999999999988663 234
Q ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc
Q 037006 375 RTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVE 454 (541)
Q Consensus 375 ~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 454 (541)
+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q 037006 455 ARTSKNVSPMQIAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 455 ~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 485 (541)
.+|..|+||+++| ..+++++|.+.+..
T Consensus 308 ~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 308 IISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp CCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred CcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 9999999999998 67899999987654
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-46 Score=362.16 Aligned_cols=262 Identities=29% Similarity=0.379 Sum_probs=248.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCC
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKASTERS-ETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRR 285 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 285 (541)
|.|+|+.|+..|+.+++++|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC
Confidence 789999999999999999999999999987 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc----------ccCCCchhHHHHHcCCHHH
Q 037006 286 RDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIR----------NKSGKTAYDVAAECGHSRL 355 (541)
Q Consensus 286 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----------~~~g~t~l~~A~~~g~~~~ 355 (541)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+
T Consensus 85 ~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~- 162 (285)
T 1wdy_A 85 VKLLKLFLSKGADVNECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE- 162 (285)
T ss_dssp HHHHHHHHHTTCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH-
T ss_pred HHHHHHHHHcCCCCCccC-cccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH-
Confidence 999999999999999887 78999999999999999999999999998877 778999999888766654
Q ss_pred HHHhhcCCchHHHHhhCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHhcCC----HHHHHHHHHcCCCCCCCCCCCChH
Q 037006 356 FDALKLGDSLCVAARKGEVRTMQRLIEA-GAAINGKDLHGWTALHRASFKGK----IEVVRMLIDKGIDVDAKDEDGYTA 430 (541)
Q Consensus 356 ~~~l~~~~~l~~a~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~Aa~~g~----~~~v~~Ll~~g~d~~~~d~~g~tp 430 (541)
++++|+++ |++++..+..|+||||+|+..++ .+++++|+++|++++.+|..|+||
T Consensus 163 --------------------~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~ 222 (285)
T 1wdy_A 163 --------------------VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP 222 (285)
T ss_dssp --------------------HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred --------------------HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 57788887 99999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCc
Q 037006 431 LHCAVESGHTDVTELLVK-KGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGIQ 490 (541)
Q Consensus 431 L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~ 490 (541)
||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 223 L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred HHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 999999999999999999 899999999999999999999999999999999999987654
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-47 Score=381.26 Aligned_cols=312 Identities=26% Similarity=0.292 Sum_probs=223.2
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcC
Q 037006 139 VLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAG 218 (541)
Q Consensus 139 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g 218 (541)
.|+.++..|..+.++.++++.... ..-.+++.-+...|+++++++++....+.. |.||||+|+..+
T Consensus 40 ~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------g~t~L~~Aa~~~ 105 (373)
T 2fo1_E 40 SLLEASYDGYIKRQRNELQHYSLY--------PNPQGYGNGNDFLGDFNHTNLQIPTEPEPE------SPIKLHTEAAGS 105 (373)
T ss_dssp --------------------------------------------------------------------CCCHHHHHHHSS
T ss_pred ccccccCCccccchhhhhhhhccc--------cCccccCCCCCccccccccccccccCCCCC------CccHHHHHhcCC
Confidence 455666667777777666654321 022345666777788888888776543322 788888888855
Q ss_pred CHHHHHHHHHCCCCCCCCC-CCCchHHHHHHhcCCHHHHHHHH--------HcCCCCCCCCCCCChHHHHHHHhCCHHHH
Q 037006 219 EALIVELLLARKASTERSE-TSTWGPIHLALRGGHLEVLKLLL--------IKGANVNALTKDGNTALHLAVEDRRRDCA 289 (541)
Q Consensus 219 ~~~iv~~Ll~~g~~~~~~~-~~~~t~L~~Aa~~g~~~iv~~Ll--------~~g~~~~~~d~~g~t~L~~A~~~g~~~~v 289 (541)
. +++++|+. .+++..+ ..|+||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..|+.+++
T Consensus 106 ~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv 182 (373)
T 2fo1_E 106 Y-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLV 182 (373)
T ss_dssp S-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred c-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHH
Confidence 4 67777754 4566666 67888888888888887777665 78999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCccccccCCCchhHHHHHcCCHHHHHHhhcCCchH
Q 037006 290 RLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKG---ANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLC 366 (541)
Q Consensus 290 ~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~ 366 (541)
++|+++|++++..+ ..|.||||+|+..|+.+++++|++.+ ++++..|..|.||||+|+..+..
T Consensus 183 ~~Ll~~ga~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~------------- 248 (373)
T 2fo1_E 183 AYLMKAGADPTIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR------------- 248 (373)
T ss_dssp HHHHHTTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST-------------
T ss_pred HHHHHCCCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCc-------------
Confidence 99999999998777 67899999999999999999999887 78888899999999988876631
Q ss_pred HHHhhCCHHHHHHHHHcCCCCCC--------CCCCCChHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHc
Q 037006 367 VAARKGEVRTMQRLIEAGAAING--------KDLHGWTALHRASFKGKIEVVRMLIDKG-IDVDAKDEDGYTALHCAVES 437 (541)
Q Consensus 367 ~a~~~~~~~~~~~Ll~~g~~~~~--------~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~ 437 (541)
.+.+++++|+++|++++. .|..|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..
T Consensus 249 -----~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 249 -----DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp -----THHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred -----chHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 134568888999988876 5678999999999999999999999886 99999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q 037006 438 GHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATK 486 (541)
Q Consensus 438 g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 486 (541)
|+.++|++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++.
T Consensus 324 g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 324 GRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 9999999999999999999999999999999999999999999998864
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-45 Score=369.14 Aligned_cols=291 Identities=29% Similarity=0.318 Sum_probs=201.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHH
Q 037006 209 TPLEAAAAAGEALIVELLLAR-KASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRD 287 (541)
Q Consensus 209 t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~ 287 (541)
++|+.|+..|+.++++.|+.. +.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH
Confidence 344444444444433333332 3344444444444444444444444444444444444444444555555555555555
Q ss_pred HHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHH
Q 037006 288 CARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCV 367 (541)
Q Consensus 288 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~ 367 (541)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.+++++|+..+..+.+.+.....++..
T Consensus 106 iv~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~ 184 (351)
T 3utm_A 106 VTELLLKHGACVNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQ 184 (351)
T ss_dssp HHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHH
Confidence 5555555555444443 344555555555555555555555555555555555555555555544444444444455667
Q ss_pred HHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHH
Q 037006 368 AARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFK---GKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTE 444 (541)
Q Consensus 368 a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~ 444 (541)
++..+..+.++.++..+......+..|.||||+|+.. +..+++++|++.|++++.+|..|+||||+|+..|+.++++
T Consensus 185 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 264 (351)
T 3utm_A 185 AAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264 (351)
T ss_dssp HHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 7778888888888888776666788999999999999 5689999999999999999999999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCcccccchhhhh
Q 037006 445 LLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGIQQTNLRQVSIQ 500 (541)
Q Consensus 445 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~ 500 (541)
+|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+++.++
T Consensus 265 ~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh
Confidence 99999999999999999999999999999999999999999999999999988775
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-45 Score=366.91 Aligned_cols=281 Identities=23% Similarity=0.236 Sum_probs=233.3
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcC
Q 037006 139 VLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAG 218 (541)
Q Consensus 139 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g 218 (541)
++..+...|+.+.++.++... .|..|.||||+|+..+. +++++|+. .+++..+...|.||||+|+..|
T Consensus 69 ~~~~~~~~g~~~~~~~~~~~~---------~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g 136 (373)
T 2fo1_E 69 YGNGNDFLGDFNHTNLQIPTE---------PEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNS 136 (373)
T ss_dssp ----------------------------------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTT
T ss_pred cCCCCCccccccccccccccC---------CCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCC
Confidence 345566678888887765543 46789999999999654 88888865 4666677445999999999999
Q ss_pred CHHHHHHHH--------HCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHH
Q 037006 219 EALIVELLL--------ARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCAR 290 (541)
Q Consensus 219 ~~~iv~~Ll--------~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 290 (541)
+.+++++|+ +.|++++..+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.++++
T Consensus 137 ~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~ 216 (373)
T 2fo1_E 137 SAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMV 216 (373)
T ss_dssp CCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHH
Confidence 998888776 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCC---CCCCccCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccc--------cccCCCchhHHHHHcCCHHHH
Q 037006 291 LLLANG---ARPDIRNARDGDTPLHITASLG---YEQMVKLLLQKGANKYI--------RNKSGKTAYDVAAECGHSRLF 356 (541)
Q Consensus 291 ~Ll~~g---~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~--------~~~~g~t~l~~A~~~g~~~~~ 356 (541)
+|++.+ ++++..+ ..|.||||+|+..+ +.+++++|++.|++++. .+..|.||||+|+..|+.++
T Consensus 217 ~Ll~~~~~~~~~~~~d-~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~- 294 (373)
T 2fo1_E 217 YMLNSTKLKGDIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPI- 294 (373)
T ss_dssp HHTTSHHHHHTTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHH-
T ss_pred HHHhcCccccChhhcC-CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHH-
Confidence 999998 7888777 78999999999998 89999999999999876 56789999999987776654
Q ss_pred HHhhcCCchHHHHhhCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 037006 357 DALKLGDSLCVAARKGEVRTMQRLIEAG-AAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAV 435 (541)
Q Consensus 357 ~~l~~~~~l~~a~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 435 (541)
+++|++++ ++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+
T Consensus 295 --------------------v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 295 --------------------VKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 354 (373)
T ss_dssp --------------------HHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred --------------------HHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHH
Confidence 77788775 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCC
Q 037006 436 ESGHTDVTELLVKKGADV 453 (541)
Q Consensus 436 ~~g~~~~v~~Ll~~ga~~ 453 (541)
.+|+.+++++|+++|++-
T Consensus 355 ~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 355 ANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HTTCHHHHHHHHTTC---
T ss_pred HcCCHHHHHHHHhcCccc
Confidence 999999999999998763
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.4e-44 Score=344.89 Aligned_cols=256 Identities=26% Similarity=0.354 Sum_probs=128.8
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCC-----------CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q 037006 170 DAQGQTLLHIAIAQRRPDIVQLLLEFGPD-----------VESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSET 238 (541)
Q Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----------~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 238 (541)
...|.|+||+|+..|+.+.+..++..+.. ++..+. .|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~ 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAV-SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSC-CSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCc-cCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 35788888888888887766666554422 111222 255555555555555555555555555555555
Q ss_pred CCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcC
Q 037006 239 STWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLG 318 (541)
Q Consensus 239 ~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 318 (541)
.|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.|++++... .|.||||+|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~g 168 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAARRG 168 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcC
Confidence 55556666665556666666665555555555555666666666666666666665555554332 3555555555555
Q ss_pred CHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHH
Q 037006 319 YEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTAL 398 (541)
Q Consensus 319 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L 398 (541)
+.+++++|++.|+ +++.+|..|+|||
T Consensus 169 ~~~~v~~Ll~~g~------------------------------------------------------~~~~~d~~g~t~L 194 (285)
T 3d9h_A 169 HVECVNSLIAYGG------------------------------------------------------NIDHKISHLGTPL 194 (285)
T ss_dssp CHHHHHHHHHTTC------------------------------------------------------CTTCCBTTTBCHH
T ss_pred CHHHHHHHHHCCC------------------------------------------------------CCCCcCCCCCCHH
Confidence 5555555555544 4445555555666
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHH
Q 037006 399 HRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRI 478 (541)
Q Consensus 399 ~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 478 (541)
|+|+..|+.+++++|+++|++++. |..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+ ++.+++++
T Consensus 195 ~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~ 271 (285)
T 3d9h_A 195 YLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQL 271 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHH
T ss_pred HHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHH
Confidence 666666666666666666666663 555666666666666666666666666666666666666666665 33456666
Q ss_pred HHhC-CCC
Q 037006 479 LMHG-GAT 485 (541)
Q Consensus 479 Ll~~-ga~ 485 (541)
|+++ |++
T Consensus 272 Ll~~~~a~ 279 (285)
T 3d9h_A 272 FLEREGAS 279 (285)
T ss_dssp HHHHC---
T ss_pred HHHhhccC
Confidence 6654 444
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=344.67 Aligned_cols=250 Identities=24% Similarity=0.222 Sum_probs=162.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC-----------CCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCh
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKAS-----------TERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNT 275 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~-----------~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t 275 (541)
+.|+||+|+..|+.+.+..++..+.. .+..+..|+||||+|+..|+.+++++|++.|++++..|.+|.|
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t 94 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVS 94 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCC
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 78899999999987666666554321 2334444455555555555555555555555555544444445
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHH
Q 037006 276 ALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRL 355 (541)
Q Consensus 276 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~ 355 (541)
|||+|+. .|+.+++++|++.|++++..|..|.||||+|+..|+.+
T Consensus 95 ~L~~A~~----------------------------------~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~- 139 (285)
T 3d9h_A 95 PLHEACL----------------------------------GGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD- 139 (285)
T ss_dssp HHHHHHH----------------------------------TTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH-
T ss_pred HHHHHHH----------------------------------CCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHH-
Confidence 5555444 44445555555545444445555555555554443332
Q ss_pred HHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 037006 356 FDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAV 435 (541)
Q Consensus 356 ~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 435 (541)
++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 140 --------------------~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 198 (285)
T 3d9h_A 140 --------------------CVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 198 (285)
T ss_dssp --------------------HHHHHHHTTCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHH
T ss_pred --------------------HHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 24445555555553 335899999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCcccccchhhhhhcCCCcccccccccc
Q 037006 436 ESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGIQQTNLRQVSIQFGNGKVGRDQMEGKF 515 (541)
Q Consensus 436 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (541)
..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++++..+..+.+++.++.. +....+++...
T Consensus 199 ~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~ 275 (285)
T 3d9h_A 199 ENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLER 275 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSHHHHHHHHH
T ss_pred HcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccHHHHHHHHh
Confidence 99999999999999999995 8899999999999999999999999999999999999999999984 34556665555
No 13
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=337.34 Aligned_cols=249 Identities=25% Similarity=0.324 Sum_probs=210.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCH
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRR 286 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 286 (541)
|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 82 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 67777777777777777777777777777778888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchH
Q 037006 287 DCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLC 366 (541)
Q Consensus 287 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~ 366 (541)
+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus 83 ~~v~~Ll~~g~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~------------- 147 (261)
T 2xai_A 83 DCVNLLLQHGASVQPE--SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR------------- 147 (261)
T ss_dssp HHHHHHHHTTCCSSCS--CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH-------------
T ss_pred HHHHHHHHCCCCCCCC--CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH-------------
Confidence 8888888888888754 3588999999999999999999999999888888999998888776665
Q ss_pred HHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHH
Q 037006 367 VAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELL 446 (541)
Q Consensus 367 ~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~L 446 (541)
+++++|+++|++++. +..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+.++ +++++|
T Consensus 148 --------~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~l 216 (261)
T 2xai_A 148 --------ACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLF 216 (261)
T ss_dssp --------HHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHH
T ss_pred --------HHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHH
Confidence 447778889999985 888999999999999999999999999999999999999999999655 589999
Q ss_pred HHCCCC--------CcccCCCCCCHHHHHHHcCcHHHHHHHHh
Q 037006 447 VKKGAD--------VEARTSKNVSPMQIAECLHYAGISRILMH 481 (541)
Q Consensus 447 l~~ga~--------~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~ 481 (541)
++++.+ ++.+|..|.|++|+|......+.++-++.
T Consensus 217 l~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 217 LEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp HHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred HhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 998764 45789999999999998888777766654
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.9e-44 Score=362.76 Aligned_cols=272 Identities=21% Similarity=0.234 Sum_probs=198.4
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHH
Q 037006 166 ADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIH 245 (541)
Q Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~ 245 (541)
.+..|..|.||||+||..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++. ..|+||||
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~ 89 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRF-GCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIH 89 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHH
Confidence 4556777888888888888888888888888888777765 77888888888888888888877775443 35677777
Q ss_pred HHHhcCCHHHHHHHHHc----CCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCC-------CCCCccCCCCCCcHHHHH
Q 037006 246 LALRGGHLEVLKLLLIK----GANVNALTKDGNTALHLAVEDRRRDCARLLLANG-------ARPDIRNARDGDTPLHIT 314 (541)
Q Consensus 246 ~Aa~~g~~~iv~~Ll~~----g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-------~~~~~~~~~~g~t~L~~A 314 (541)
+|+..|+.+++++|++. |++++. ++... .+++..+ ..|.||||+|
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A 145 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPES-----------------------LLNECDEREVNEIGSHVKH-CKGQTALHWC 145 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHH-----------------------HHTCCCCCCEEEETTEEEE-ESCCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHH-----------------------HHhhcchHhhhhhccccCC-CCCCCHHHHH
Confidence 77777777777777776 555443 00000 0011122 3466666666
Q ss_pred HHcC--CHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCC-----C
Q 037006 315 ASLG--YEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAA-----I 387 (541)
Q Consensus 315 ~~~g--~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~-----~ 387 (541)
+..| +.+++++|+++|++++..|..|.||||+|+..|+.+ ++++|+++|++ +
T Consensus 146 ~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~---------------------~v~~Ll~~g~~~~~~~~ 204 (364)
T 3ljn_A 146 VGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE---------------------ALDLMMDTVPSKSSLRL 204 (364)
T ss_dssp HHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHHCSCSSSCCT
T ss_pred HHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH---------------------HHHHHHhcccccccccc
Confidence 6666 666666666666666666666666666665554443 35556666666 8
Q ss_pred CCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcc------------
Q 037006 388 NGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEA------------ 455 (541)
Q Consensus 388 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~------------ 455 (541)
+..|..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 284 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL 284 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccc
Confidence 88888999999999999999999999999999999999999999999999999999999999877533
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q 037006 456 RTSKNVSPMQIAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 456 ~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 485 (541)
.+..++||+++|+..++.+.+..|+..+++
T Consensus 285 ~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 285 PDRVVWLDFVPAAADPSKQEVLQLLQEKLD 314 (364)
T ss_dssp GGGCCCCTTSCSSCCHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhccCHHHHHHHHHHHHH
Confidence 566789999999999988888788776655
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.7e-44 Score=358.80 Aligned_cols=276 Identities=17% Similarity=0.165 Sum_probs=206.9
Q ss_pred ecCcHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHH
Q 037006 134 FVGSPVLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEA 213 (541)
Q Consensus 134 ~~g~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~ 213 (541)
..|.|+|++|+..|+.++|++|++.+. +++..|..|.||||+||..|+.++|++|+++|++++.. .|.||||+
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~ 90 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGV----SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW---HGQKPIHL 90 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB---TTBCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc---CCCCHHHH
Confidence 457899999999999999999999864 36788999999999999999999999999999976653 38999999
Q ss_pred HHHcCCHHHHHHHHHC----CCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhC--CHH
Q 037006 214 AAAAGEALIVELLLAR----KASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDR--RRD 287 (541)
Q Consensus 214 A~~~g~~~iv~~Ll~~----g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~ 287 (541)
|+..|+.+++++|++. |++++.... ..... .....+++..|..|.||||+|+..| +.+
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~----------~~~~~------~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~ 154 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLN----------ECDER------EVNEIGSHVKHCKGQTALHWCVGLGPEYLE 154 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHT----------CCCCC------CEEEETTEEEEESCCCHHHHHHHSCGGGHH
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHh----------hcchH------hhhhhccccCCCCCCCHHHHHHHcCCchHH
Confidence 9999999999999998 655443000 00000 0001223345556666666666666 666
Q ss_pred HHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----ccccccCCCchhHHHHHcCCHHHHHHhhcC
Q 037006 288 CARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGAN-----KYIRNKSGKTAYDVAAECGHSRLFDALKLG 362 (541)
Q Consensus 288 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~ 362 (541)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+
T Consensus 155 ~v~~Ll~~ga~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~-------- 225 (364)
T 3ljn_A 155 MIKILVQLGASPTAKD-KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED-------- 225 (364)
T ss_dssp HHHHHHHHTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHH--------
T ss_pred HHHHHHHcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHH--------
Confidence 6666666666666655 5566777777777777777777776666 7777777777777776655543
Q ss_pred CchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCC------------CCCCCChH
Q 037006 363 DSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDA------------KDEDGYTA 430 (541)
Q Consensus 363 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~------------~d~~g~tp 430 (541)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..++||
T Consensus 226 -------------~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (364)
T 3ljn_A 226 -------------VAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLD 292 (364)
T ss_dssp -------------HHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCT
T ss_pred -------------HHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccccccccccc
Confidence 46667777888888888888888888888888888888888766432 45678899
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCc
Q 037006 431 LHCAVESGHTDVTELLVKKGADVE 454 (541)
Q Consensus 431 L~~A~~~g~~~~v~~Ll~~ga~~~ 454 (541)
|++|+..|+.+.+..|++.+++..
T Consensus 293 l~~aa~~~~~~~v~~ll~~~~~~~ 316 (364)
T 3ljn_A 293 FVPAAADPSKQEVLQLLQEKLDEV 316 (364)
T ss_dssp TSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred chhhhhccCHHHHHHHHHHHHHHH
Confidence 999999998888888888765543
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.1e-42 Score=328.35 Aligned_cols=212 Identities=26% Similarity=0.353 Sum_probs=174.6
Q ss_pred cCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 037006 250 GGHLEVLKLLLIKGANVNA-LTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQ 328 (541)
Q Consensus 250 ~g~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 328 (541)
.++.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~ 111 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLHAAVSADAQGVFQILIR 111 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4488889999988888765 47888999999999999999999999999888777 778899999999999999999999
Q ss_pred cCC-CccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCH
Q 037006 329 KGA-NKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKI 407 (541)
Q Consensus 329 ~g~-~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~ 407 (541)
.|. +++..+..|.||||+|+..|+.++ +++|+++|++++.+|..|+||||+|+..|+.
T Consensus 112 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~---------------------v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 170 (253)
T 1yyh_A 112 NRATDLDARMHDGTTPLILAARLAVEGM---------------------LEDLINSHADVNAVDDLGKSALHWAAAVNNV 170 (253)
T ss_dssp STTSCTTCCCTTCCCHHHHHHHHTCSSH---------------------HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCH
T ss_pred cCCCCccccCCCCCcHHHHHHHcChHHH---------------------HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 887 888888899999988887766544 7778889999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q 037006 408 EVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGG 483 (541)
Q Consensus 408 ~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 483 (541)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+..|+.+++++|.+..
T Consensus 171 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 171 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998653
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=330.01 Aligned_cols=250 Identities=19% Similarity=0.219 Sum_probs=204.5
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcC
Q 037006 172 QGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGG 251 (541)
Q Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g 251 (541)
+|+||||+||..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD-HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 4788888888888888888888888888887776 888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 037006 252 HLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGA 331 (541)
Q Consensus 252 ~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 331 (541)
+.+++++|+++|++++. +.+|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKI-SHLGTPLYLACENQQRACVKKLLESGA 158 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB-TTTBCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCC-CCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 88888888888888874 4558888888888888888888888888888776 678888888888888888888888888
Q ss_pred CccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHH
Q 037006 332 NKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVR 411 (541)
Q Consensus 332 ~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~ 411 (541)
+++. +..|.||||+|+..|+. +++++|+++|++++.+|..|+||||+|+.++ ++++
T Consensus 159 ~~~~-~~~g~t~Lh~A~~~~~~---------------------~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~ 214 (261)
T 2xai_A 159 DVNQ-GKGQDSPLHAVARTASE---------------------ELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQ 214 (261)
T ss_dssp CTTC-CBTTBCHHHHHHHHTCH---------------------HHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHH
T ss_pred CCCC-CCCCCChHHHHHHcCCH---------------------HHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHH
Confidence 8875 77888888888766655 4477788888888888888888888888655 4788
Q ss_pred HHHHcCCC--------CCCCCCCCChHHHHHHHcCCHHHHHHHHH
Q 037006 412 MLIDKGID--------VDAKDEDGYTALHCAVESGHTDVTELLVK 448 (541)
Q Consensus 412 ~Ll~~g~d--------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 448 (541)
+|++++.+ ++.+|..|.||+|.|.+....+.++-++.
T Consensus 215 ~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 215 LFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp HHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred HHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 88887654 44678899999999988887777776554
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.5e-41 Score=320.86 Aligned_cols=229 Identities=29% Similarity=0.396 Sum_probs=187.1
Q ss_pred CCCCCCCchHHHHHHhcCCHHHHHHHHH----cCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCc
Q 037006 234 ERSETSTWGPIHLALRGGHLEVLKLLLI----KGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDT 309 (541)
Q Consensus 234 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t 309 (541)
+..|..|+||||+|+..|+.+++++|++ .|.+++..|..|.||||+|+..|+.+++++|++.|++++..+ ..|.|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t 81 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD-RHGQT 81 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCC
Confidence 3456677777777777777777777776 577788888888888888888888888888888888877766 67788
Q ss_pred HHHHHHHcCCHHHHHHHHHcCC----CccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCC
Q 037006 310 PLHITASLGYEQMVKLLLQKGA----NKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGA 385 (541)
Q Consensus 310 ~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~ 385 (541)
|||+|+..|+.+++++|++.++ +++..+..|.||||+|+..|+. +++++|+++|+
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~---------------------~~~~~Ll~~g~ 140 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ---------------------ETVQLLLERGA 140 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCH---------------------HHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCH---------------------HHHHHHHHcCC
Confidence 8888888888888888888776 7777888888888887766554 44777888888
Q ss_pred CCCCCC-CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 037006 386 AINGKD-LHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPM 464 (541)
Q Consensus 386 ~~~~~d-~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l 464 (541)
+++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||+
T Consensus 141 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 220 (241)
T 1k1a_A 141 DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPL 220 (241)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred CcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHH
Confidence 888888 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhCCC
Q 037006 465 QIAECLHYAGISRILMHGGA 484 (541)
Q Consensus 465 ~~A~~~~~~~i~~~Ll~~ga 484 (541)
++|+..|+.++++.|++.++
T Consensus 221 ~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 221 MVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp TTCSSHHHHHHHTC------
T ss_pred HHHHhcCcHHHHhhhccCCC
Confidence 99999999999999998765
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.2e-40 Score=314.11 Aligned_cols=227 Identities=25% Similarity=0.390 Sum_probs=186.0
Q ss_pred CCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHH
Q 037006 232 STERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPL 311 (541)
Q Consensus 232 ~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L 311 (541)
+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.|||
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L 81 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKD-AEGSTCL 81 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCC-TTSCCHH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC-CCCCcHH
Confidence 456667777777777777777777777777777777777777788888888888888888888777777666 6677888
Q ss_pred HHHHHcCCHHHHHHHHHcC-CCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCC
Q 037006 312 HITASLGYEQMVKLLLQKG-ANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGK 390 (541)
Q Consensus 312 ~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 390 (541)
|+|+..|+.+++++|++.| .+++..+..|.||||+|+..|+. +++++|+++|++++.+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~---------------------~~~~~Ll~~g~~~~~~ 140 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHV---------------------DLVKLLLSKGSDINIR 140 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCH---------------------HHHHHHHHTTCCTTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCH---------------------HHHHHHHHCCCCCCcc
Confidence 8888888888888888877 67777788888888777766554 4467778888888888
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHc
Q 037006 391 DLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECL 470 (541)
Q Consensus 391 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 470 (541)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..
T Consensus 141 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 220 (237)
T 3b7b_A 141 DNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLN 220 (237)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTT
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHH
Q 037006 471 HYAGISRILM 480 (541)
Q Consensus 471 ~~~~i~~~Ll 480 (541)
++.+.+..|+
T Consensus 221 ~~~~~~~~l~ 230 (237)
T 3b7b_A 221 SQVWSALQMS 230 (237)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8875554444
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.6e-41 Score=320.28 Aligned_cols=243 Identities=25% Similarity=0.263 Sum_probs=164.9
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCchHH
Q 037006 166 ADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTER-SETSTWGPI 244 (541)
Q Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~~~~~~t~L 244 (541)
++.+|..|+||||+|+..|+.- . ....+...++.+++++|++.|++++. .+..|+|||
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~----------~-----------~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L 61 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGL----------E-----------TGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61 (253)
T ss_dssp ----------------------------------------------------------------------CCCTTSCCHH
T ss_pred CCCCCCCCCcHHHHHHhccccc----------c-----------ccchhhcCCChHHHHHHHHccCCcccccCCCCCcHH
Confidence 5678899999999999988421 0 01125566777888888888777754 467788888
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCCcHHHHHHHcCCHHHH
Q 037006 245 HLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGA-RPDIRNARDGDTPLHITASLGYEQMV 323 (541)
Q Consensus 245 ~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~g~~~~v 323 (541)
|+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|+ +++..+ ..|.||||+|+..|+.+++
T Consensus 62 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v 140 (253)
T 1yyh_A 62 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGML 140 (253)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHHHHHHHTCSSHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHHcChHHHH
Confidence 88888888888888888888888888888888888888888888888888876 666655 6788888888888888888
Q ss_pred HHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHh
Q 037006 324 KLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASF 403 (541)
Q Consensus 324 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~ 403 (541)
++|++.|++++..|..|.||||+|+..|+.++ +++|+++|++++.+|..|+||||+|+.
T Consensus 141 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~---------------------v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 141 EDLINSHADVNAVDDLGKSALHWAAAVNNVDA---------------------AVVLLKNGANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH---------------------HHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH---------------------HHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 88888888888888888888888888776544 677888888999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q 037006 404 KGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGA 451 (541)
Q Consensus 404 ~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga 451 (541)
.|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|.+...
T Consensus 200 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred CCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999987643
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.4e-41 Score=326.27 Aligned_cols=263 Identities=24% Similarity=0.226 Sum_probs=182.1
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC---CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCch
Q 037006 166 ADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPD---VESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWG 242 (541)
Q Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t 242 (541)
++.+|..|.||||+||..|+.++|++|++.|++ ++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL-GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 456788999999999999999999999999988 5555555 888888888888888888888888888888888888
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCH-H
Q 037006 243 PIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYE-Q 321 (541)
Q Consensus 243 ~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~-~ 321 (541)
|||+|+..|+.+++++|+++|++........ ++..+... ....+.++++.++..+.. .
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~------------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 139 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDT------------------YLTQSQDC---TPDTSHAPAAVDSQPNPENE 139 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHH------------------Hhhccccc---Ccchhcchhhhccccccchh
Confidence 8888888888888888888877654322111 01111111 113355666666655443 3
Q ss_pred HHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCC-CCChHHHH
Q 037006 322 MVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDL-HGWTALHR 400 (541)
Q Consensus 322 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~ 400 (541)
....+...+.+++..+..|.||||+|+..|+.+ ++++|+++|++++..+. .|+||||+
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~---------------------~v~~Ll~~g~~~~~~~~~~g~tpL~~ 198 (282)
T 1oy3_D 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE---------------------MVRLLRDAGADLNKPEPTCGRTPLHL 198 (282)
T ss_dssp ----CCCGGGGTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred hhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHH---------------------HHHHHHHcCCCCCCCCCCCCcCHHHH
Confidence 444455567778888888999988887766654 47778888999988875 49999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC
Q 037006 401 ASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLH 471 (541)
Q Consensus 401 Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 471 (541)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|....
T Consensus 199 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred HHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999887654
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.5e-40 Score=310.54 Aligned_cols=224 Identities=29% Similarity=0.360 Sum_probs=170.2
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcC
Q 037006 240 TWGPIHLALRGGHLEVLKLLLIKGA-NVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLG 318 (541)
Q Consensus 240 ~~t~L~~Aa~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 318 (541)
+.+|||.|+..|+.+.+++|++.+. .++..|..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD-DAGWSPLHIAASAG 84 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHHT
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC-CCCCCHHHHHHHcC
Confidence 4556666666666666666665542 345556666777777777777777777777776666655 55677777777777
Q ss_pred CHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHH
Q 037006 319 YEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTAL 398 (541)
Q Consensus 319 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L 398 (541)
+.+++++|+++|++++..+..|.||||+|+..|+.+ ++++|+++|++++..+..|.|||
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~---------------------~~~~Ll~~g~~~~~~~~~g~t~L 143 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHE---------------------IAVMLLEGGANPDAKDHYDATAM 143 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH---------------------HHHHHHHcCCCCCCcCCCCCcHH
Confidence 777777777777777777777777777666555443 36667777777787888888888
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHH
Q 037006 399 HRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRI 478 (541)
Q Consensus 399 ~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 478 (541)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.+++++
T Consensus 144 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~l 223 (231)
T 3aji_A 144 HRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRL 223 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHH
Confidence 88888888899999998888888888888999999999999999999999999988888889999999888888888888
Q ss_pred HHhCCCC
Q 037006 479 LMHGGAT 485 (541)
Q Consensus 479 Ll~~ga~ 485 (541)
|+++|++
T Consensus 224 L~~~~a~ 230 (231)
T 3aji_A 224 AEGEEAS 230 (231)
T ss_dssp HHHHHHC
T ss_pred Hcccccc
Confidence 8887764
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.3e-40 Score=312.81 Aligned_cols=230 Identities=32% Similarity=0.370 Sum_probs=158.6
Q ss_pred CCCCCCCccHHHHHHHcCCHHHHHHHHh----cCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCch
Q 037006 167 DSADAQGQTLLHIAIAQRRPDIVQLLLE----FGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWG 242 (541)
Q Consensus 167 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t 242 (541)
+.+|.+|.||||+||..|+.++|++|++ .|.+++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNL-RQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccccc-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 4567888888888888888888888886 67777766655 677777777777777777777777777777777777
Q ss_pred HHHHHHhcCCHHHHHHHHHcCC----CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcC
Q 037006 243 PIHLALRGGHLEVLKLLLIKGA----NVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLG 318 (541)
Q Consensus 243 ~L~~Aa~~g~~~iv~~Ll~~g~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 318 (541)
|||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++..+...|.||||+|+..|
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 7777777777777777777765 566666666666666666666666666666666666555445666666666655
Q ss_pred CHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHH
Q 037006 319 YEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTAL 398 (541)
Q Consensus 319 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L 398 (541)
+.+++++|+++| ++++.+|..|+|||
T Consensus 162 ~~~~v~~Ll~~g------------------------------------------------------~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 162 SLSMVQLLLQHG------------------------------------------------------ANVNAQMYSGSSAL 187 (241)
T ss_dssp CHHHHHHHHHTT------------------------------------------------------CCTTCBCTTSCBHH
T ss_pred CHHHHHHHHHcC------------------------------------------------------CCCCCcCCCCCCHH
Confidence 555555555554 45555666677777
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q 037006 399 HRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGA 451 (541)
Q Consensus 399 ~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga 451 (541)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.++
T Consensus 188 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 77777777777888888788877777778888888887778888877777654
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=325.15 Aligned_cols=228 Identities=28% Similarity=0.359 Sum_probs=143.1
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCC--------CCCCCCCCChHHHHHHHhCCH-HHHHHHHHCCCCCCccCCCCCCcH
Q 037006 240 TWGPIHLALRGGHLEVLKLLLIKGAN--------VNALTKDGNTALHLAVEDRRR-DCARLLLANGARPDIRNARDGDTP 310 (541)
Q Consensus 240 ~~t~L~~Aa~~g~~~iv~~Ll~~g~~--------~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~g~t~ 310 (541)
+.++|+.|+..|+.++|++|++.|++ ++..+..|.|||++|+..++. .++++|++.|++++..+ ..|.||
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d-~~G~Tp 89 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS-QDGSSP 89 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCC-TTSCCH
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC-CCCCCH
Confidence 34445555555555555555544432 344566677777777766654 36777777777777666 667777
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCC
Q 037006 311 LHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGK 390 (541)
Q Consensus 311 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 390 (541)
||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.+ ++++|+++|++++.+
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~---------------------~~~~Ll~~g~~~n~~ 148 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQ---------------------VVKCLLDSNAKPNKK 148 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH---------------------HHHHHHHTTCCSCCC
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHH---------------------HHHHHHHCCCCCCCC
Confidence 77777777777777777777777777777777777776655543 466677788888888
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHc
Q 037006 391 DLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECL 470 (541)
Q Consensus 391 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 470 (541)
|..|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+.+
T Consensus 149 d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 149 DLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp CTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 88888888888888899999999999999998888899999999999999999999999999998888899999998877
Q ss_pred Cc-HHHHHHHHhCCCCCCCC
Q 037006 471 HY-AGISRILMHGGATKDGI 489 (541)
Q Consensus 471 ~~-~~i~~~Ll~~ga~~~~~ 489 (541)
++ .+++++|...++..+..
T Consensus 229 ~~i~~lL~~l~~~~~~~~~~ 248 (269)
T 4b93_B 229 SKIMELLQVVPSCVASLDDV 248 (269)
T ss_dssp CHHHHHTTC-----------
T ss_pred CcHHHHHHHHHHhchhhhhc
Confidence 65 45555556555554433
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.3e-40 Score=308.27 Aligned_cols=227 Identities=26% Similarity=0.364 Sum_probs=142.8
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHH
Q 037006 166 ADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIH 245 (541)
Q Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~ 245 (541)
++..|..|.||||+||..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSED-QRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCC-CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 4456666667777777777777667666666666655544 556666666666666666666555555555555555555
Q ss_pred HHHhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHH
Q 037006 246 LALRGGHLEVLKLLLIKG-ANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVK 324 (541)
Q Consensus 246 ~Aa~~g~~~iv~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 324 (541)
+|+..|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|++.
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~----------------------------- 133 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK----------------------------- 133 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------------------------
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-----------------------------
Confidence 555555555555555554 45555555555555555555555555555554
Q ss_pred HHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhc
Q 037006 325 LLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFK 404 (541)
Q Consensus 325 ~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~ 404 (541)
|++++..+..|.||||+|+..|+. +++++|+++|++++..|..|.||||+|+..
T Consensus 134 -----g~~~~~~~~~g~t~L~~A~~~~~~---------------------~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 134 -----GSDINIRDNEENICLHWAAFSGCV---------------------DIAEILLAAKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHHCCH---------------------HHHHHHHTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred -----CCCCCccCCCCCCHHHHHHHCCCH---------------------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 444444555555555554443333 234555555666666777788888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHH
Q 037006 405 GKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVK 448 (541)
Q Consensus 405 g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 448 (541)
|+.+++++|+++|++++.+|..|+||||+|+.+|+.+.+..|++
T Consensus 188 ~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 188 NRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888888888888888888765555543
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.9e-40 Score=321.03 Aligned_cols=261 Identities=26% Similarity=0.289 Sum_probs=168.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHh
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKAS---TERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVED 283 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 283 (541)
|.||||+|+..|+.+++++|++.|++ ++..+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 88 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRV 88 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 66666666666666666666666665 555566666666666666666666666666666666666666666666666
Q ss_pred CCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCC
Q 037006 284 RRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGD 363 (541)
Q Consensus 284 g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 363 (541)
|+.+++++|+++|++...... .+.+ ..+ .......+.++++.++..+..
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~---~~~~----------------~~~--~~~~~~~~~~~~~~~~~~~~~---------- 137 (282)
T 1oy3_D 89 RAHTCACVLLQPRPSHPRDAS---DTYL----------------TQS--QDCTPDTSHAPAAVDSQPNPE---------- 137 (282)
T ss_dssp TCHHHHHHHSSSCCSSCCCC------------------------------------------------------------
T ss_pred CCcchhHhhhccCCCCchhhH---HHHh----------------hcc--cccCcchhcchhhhccccccc----------
Confidence 666666666666655432210 0000 000 011122334444444333222
Q ss_pred chHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CChHHHHHHHcCCHHH
Q 037006 364 SLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDED-GYTALHCAVESGHTDV 442 (541)
Q Consensus 364 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~-g~tpL~~A~~~g~~~~ 442 (541)
......+...+.+++..+..|+||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..|+.++
T Consensus 138 ----------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~ 207 (282)
T 1oy3_D 138 ----------NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASV 207 (282)
T ss_dssp ----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred ----------hhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHH
Confidence 22344455667889999999999999999999999999999999999999865 9999999999999999
Q ss_pred HHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCcccccchhhhhhcCCCccc
Q 037006 443 TELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGIQQTNLRQVSIQFGNGKVGR 508 (541)
Q Consensus 443 v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~ 508 (541)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+++..+......+.
T Consensus 208 v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~~~ 273 (282)
T 1oy3_D 208 LELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDN 273 (282)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------------
T ss_pred HHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccccc
Confidence 999999999999999999999999999999999999999999999999999999988776655443
No 27
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-40 Score=322.43 Aligned_cols=245 Identities=27% Similarity=0.345 Sum_probs=185.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCH
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRR 286 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 286 (541)
+.|||+.|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~ 119 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 45677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCch
Q 037006 287 DCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQ-KGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSL 365 (541)
Q Consensus 287 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l 365 (541)
+++++|+++|++++..+ ..|.||||+|+..++.++++.++. .|.+++..+..+.+++.
T Consensus 120 ~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-------------------- 178 (299)
T 1s70_B 120 DIAEYLISQGAHVGAVN-SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML-------------------- 178 (299)
T ss_dssp HHHHHHHHTTCCTTCCC-TTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHHhCCCCCCCcC-CCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--------------------
Confidence 77777777777777666 667788888777777777777665 35554433322222211
Q ss_pred HHHHhhCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHH
Q 037006 366 CVAARKGEVRTMQRLIEA-GAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTE 444 (541)
Q Consensus 366 ~~a~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~ 444 (541)
..+..++.. .......+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 179 ---------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~ 249 (299)
T 1s70_B 179 ---------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACR 249 (299)
T ss_dssp ---------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred ---------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHH
Confidence 113334444 4444556788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHh
Q 037006 445 LLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMH 481 (541)
Q Consensus 445 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~ 481 (541)
+|+++|++++.+|..|.|||++|.......+.+++-+
T Consensus 250 ~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~ 286 (299)
T 1s70_B 250 ILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKK 286 (299)
T ss_dssp HHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHHHHH
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999976544444444433
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.8e-40 Score=307.61 Aligned_cols=223 Identities=26% Similarity=0.326 Sum_probs=148.3
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHH
Q 037006 209 TPLEAAAAAGEALIVELLLARKAS-TERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRD 287 (541)
Q Consensus 209 t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~ 287 (541)
+||+.|+..|+.+++++|++.+.. .+..+..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 87 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDE 87 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHH
Confidence 444444444444444444433322 3334445555555555555555555555555555555555566666666666666
Q ss_pred HHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHH
Q 037006 288 CARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCV 367 (541)
Q Consensus 288 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~ 367 (541)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus 88 ~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------------- 152 (231)
T 3aji_A 88 IVKALLVKGAHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL-------------- 152 (231)
T ss_dssp HHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH--------------
T ss_pred HHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH--------------
Confidence 6666666666555554 4566666666666666666666666666666666666666666554443
Q ss_pred HHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHH
Q 037006 368 AARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLV 447 (541)
Q Consensus 368 a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 447 (541)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+
T Consensus 153 -------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 153 -------KMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp -------HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred -------HHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 3356666777777778888889999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCC
Q 037006 448 KKGADV 453 (541)
Q Consensus 448 ~~ga~~ 453 (541)
++|+++
T Consensus 226 ~~~a~i 231 (231)
T 3aji_A 226 GEEASM 231 (231)
T ss_dssp HHHHCC
T ss_pred cccccC
Confidence 888764
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=321.53 Aligned_cols=239 Identities=28% Similarity=0.384 Sum_probs=169.8
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHH
Q 037006 168 SADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLA 247 (541)
Q Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~A 247 (541)
.+|..+.++|+.||..|+.++|++|++.|++...... ..++..+..+.|||++|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~--------------------------~~~~~~~~~~~t~L~~a 59 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAE--------------------------DTVSAADPEFCHPLCQC 59 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccc--------------------------ccccccCccCCCHHHHH
Confidence 4567778899999999999999999988875432111 11344566778888888
Q ss_pred HhcCCH-HHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 037006 248 LRGGHL-EVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLL 326 (541)
Q Consensus 248 a~~g~~-~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 326 (541)
+..++. .++++|++.|+++|..|.+|+||||+|+..|+.+++++|++.|++++..+ ..|.||+++|+..++.+++++|
T Consensus 60 ~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 60 PKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN-ADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp ---------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-CCCCCccccccccChHHHHHHH
Confidence 887765 47888888899999999999999999999999999999999999988777 7789999999999999999999
Q ss_pred HHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCC
Q 037006 327 LQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGK 406 (541)
Q Consensus 327 l~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~ 406 (541)
++.|++++..|..|+||||+|+..|+.++ +++|+++|+++|.++..|+||||+|+..|+
T Consensus 139 l~~g~~~n~~d~~g~TpL~~A~~~g~~~~---------------------v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 139 LDSNAKPNKKDLSGNTPLIYACSGGHHEL---------------------VALLLQHGASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp HHTTCCSCCCCTTCCCHHHHHHHTTCGGG---------------------HHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHCCCHHH---------------------HHHHHHCCCCCCccccCCCcHHHHHHHcCC
Confidence 99999999999999999998888777654 777889999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC-HHHHHHHHHCCCCCc
Q 037006 407 IEVVRMLIDKGIDVDAKDEDGYTALHCAVESGH-TDVTELLVKKGADVE 454 (541)
Q Consensus 407 ~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~-~~~v~~Ll~~ga~~~ 454 (541)
.++|++|+++|+|++.+|..|+||||+|+++++ .+++++|...++.++
T Consensus 198 ~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 198 VFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence 999999999999999999999999999998875 355555556555543
No 30
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=305.44 Aligned_cols=232 Identities=28% Similarity=0.350 Sum_probs=177.2
Q ss_pred CCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHH
Q 037006 234 ERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHI 313 (541)
Q Consensus 234 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 313 (541)
+..+..+.++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++......|.||||+
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 44556677777777777777777777777777777777777777777777777777777777777776665557778888
Q ss_pred HHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCC
Q 037006 314 TASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLH 393 (541)
Q Consensus 314 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~ 393 (541)
|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+ ++++|+++|++++..+..
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~---------------------~~~~Ll~~~~~~~~~~~~ 141 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS---------------------IVAYLIAKGQDVDMMDQN 141 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH---------------------HHHHHHhcCCCccccCCC
Confidence 88777788888888777777777777777777776655543 466677777888877888
Q ss_pred CChHHHHHHhcCC-HHHHHHHHHcCCCCCCCCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC
Q 037006 394 GWTALHRASFKGK-IEVVRMLIDKGIDVDAKDE-DGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLH 471 (541)
Q Consensus 394 g~t~L~~Aa~~g~-~~~v~~Ll~~g~d~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 471 (541)
|.||||+|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|
T Consensus 142 g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 142 GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp SCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 8888888886655 7788888888888887776 7888888888888888888888888888888888888888888888
Q ss_pred cHHHHHHHHhCCCCC
Q 037006 472 YAGISRILMHGGATK 486 (541)
Q Consensus 472 ~~~i~~~Ll~~ga~~ 486 (541)
+.+++++|+++|+..
T Consensus 222 ~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 222 NVWMINHLQEARQAK 236 (240)
T ss_dssp CHHHHHHHHHHC---
T ss_pred cHHHHHHHHHhhhcc
Confidence 888888888877654
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.5e-40 Score=319.64 Aligned_cols=237 Identities=16% Similarity=0.198 Sum_probs=174.8
Q ss_pred HHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCC
Q 037006 220 ALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARP 299 (541)
Q Consensus 220 ~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 299 (541)
.++.++|.+. +++..+..|+||||+|+..|+.+++++|++.|++++..+ |+||||+|+..|+.+++++|+++|+++
T Consensus 13 ~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 88 (285)
T 3kea_A 13 KQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDD 88 (285)
T ss_dssp HHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 3444444443 356666777777777777777777777777777776663 677777777777777777777777777
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCC-CchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHH
Q 037006 300 DIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSG-KTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQ 378 (541)
Q Consensus 300 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~ 378 (541)
+..+ ..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+ +++
T Consensus 89 ~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~---------------------~v~ 146 (285)
T 3kea_A 89 SQFD-DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVS---------------------IVS 146 (285)
T ss_dssp TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHH---------------------HHH
T ss_pred CCcC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHH---------------------HHH
Confidence 7665 567777777777777777777777777777777777 67777776655543 366
Q ss_pred HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChH-HHHHHHcCCHHHHHHHHHCCCCCcccC
Q 037006 379 RLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTA-LHCAVESGHTDVTELLVKKGADVEART 457 (541)
Q Consensus 379 ~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tp-L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 457 (541)
+|+++|+++... ..|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|+++|++++.+|
T Consensus 147 ~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 147 YFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp HHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred HHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 667776665322 278888888888888888888888888888888888887 888888888888888888888888877
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCc
Q 037006 458 SKNVSPMQIAECLHYAGISRILMHGGATKDGIQ 490 (541)
Q Consensus 458 ~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~ 490 (541)
. .|+..|+.+++++|+++|++.+...
T Consensus 226 ~-------~a~~~~~~~iv~~Ll~~g~~~~~~~ 251 (285)
T 3kea_A 226 L-------ENVLLDDAEIAKMIIEKHVEYKSDS 251 (285)
T ss_dssp G-------GGGTTTCHHHHHHHHHHHHHHTTCT
T ss_pred h-------hhhhcCCHHHHHHHHHcCCCCCCcc
Confidence 3 4566788888888888888765433
No 32
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.6e-39 Score=299.13 Aligned_cols=214 Identities=26% Similarity=0.349 Sum_probs=139.5
Q ss_pred CCHHHHHHHHHcCCCCCCC-CCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 037006 251 GHLEVLKLLLIKGANVNAL-TKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQK 329 (541)
Q Consensus 251 g~~~iv~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 329 (541)
|+.+++++|++.|++++.. |..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3444455555555554443 4555555555555555555555555555555444 4455555555555555555555555
Q ss_pred CC-CccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHH
Q 037006 330 GA-NKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIE 408 (541)
Q Consensus 330 g~-~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~ 408 (541)
+. +++..+..|.||||+|+..|+. +++++|+++|++++..|..|+||||+|+..|+.+
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~---------------------~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 139 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVE---------------------GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD 139 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCH---------------------HHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcH---------------------HHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHH
Confidence 54 4555555566665555544433 3355566666666667777777788888788888
Q ss_pred HHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q 037006 409 VVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATK 486 (541)
Q Consensus 409 ~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 486 (541)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.+++++|+++|+..
T Consensus 140 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 140 AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred HHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 888888888888888778888888888888888888888888888877778888888888888888888888877754
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=297.75 Aligned_cols=233 Identities=24% Similarity=0.271 Sum_probs=149.8
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHH
Q 037006 168 SADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLA 247 (541)
Q Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~A 247 (541)
..|..|.|+|++|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++....
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~--------- 73 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKE-NVTLLHWAAINNRIDLVKYYISKGAIVDQLGG--------- 73 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT---------
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCC-CCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC---------
Confidence 34555666666666666666666666666665555443 55555555555555555555555554443322
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 037006 248 LRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLL 327 (541)
Q Consensus 248 a~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 327 (541)
..|.|||++|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+
T Consensus 74 -----------------------~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll 129 (240)
T 3eu9_A 74 -----------------------DLNSTPLHWATRQGHLSMVVQLMKYGADPSLID-GEGCSCIHLAAQFGHTSIVAYLI 129 (240)
T ss_dssp -----------------------TTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------------------CcCCChhHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCHHHHHHHHH
Confidence 224455555555555555555555555554443 44555555555555555555555
Q ss_pred HcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCC-CCChHHHHHHhcCC
Q 037006 328 QKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDL-HGWTALHRASFKGK 406 (541)
Q Consensus 328 ~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~Aa~~g~ 406 (541)
++|++++..+..|.||+|+|+..++. .+++++|++.|++++..+. .|.||||+|+..|+
T Consensus 130 ~~~~~~~~~~~~g~t~l~~a~~~~~~--------------------~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~ 189 (240)
T 3eu9_A 130 AKGQDVDMMDQNGMTPLMWAAYRTHS--------------------VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGN 189 (240)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHCCS--------------------STTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTC
T ss_pred hcCCCccccCCCCCcHHHHHHHhCCh--------------------HHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCC
Confidence 55555555556666666666543331 2336667777777887775 88999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc
Q 037006 407 IEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVE 454 (541)
Q Consensus 407 ~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 454 (541)
.+++++|+++|++++.+|..|.||||+|++.|+.+++++|+++|++..
T Consensus 190 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 190 TTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp HHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 999999999999999999999999999999999999999999887654
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.3e-39 Score=315.74 Aligned_cols=241 Identities=20% Similarity=0.188 Sum_probs=182.1
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHH
Q 037006 145 KDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVE 224 (541)
Q Consensus 145 ~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~ 224 (541)
+..+.+.+..+|.... ++..|..|.||||+|+..|+.++|++|+++|++++..+ |.||||+|+..|+.++++
T Consensus 8 ~~~~~~~v~~lL~~~~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 8 NTWKSKQLKSFLSSKD-----TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVK 79 (285)
T ss_dssp GGCCHHHHHHHHHSTT-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHH
T ss_pred HhcCHHHHHHHHHhCC-----CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHH
Confidence 4456667777776553 57788899999999999999999999999999888773 788999999988889999
Q ss_pred HHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC-ChHHHHHHHhCCHHHHHHHHHCCCCCCccC
Q 037006 225 LLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDG-NTALHLAVEDRRRDCARLLLANGARPDIRN 303 (541)
Q Consensus 225 ~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g-~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 303 (541)
+|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|++....
T Consensus 80 ~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~- 158 (285)
T 3kea_A 80 ILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL- 158 (285)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-
T ss_pred HHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-
Confidence 9888888888888888888888888888888888888888888888888 68888888888888888888888776322
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHc
Q 037006 304 ARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEA 383 (541)
Q Consensus 304 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~ 383 (541)
..|.||||+|+..|+.+++++|+++|++++..
T Consensus 159 -~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~----------------------------------------------- 190 (285)
T 3kea_A 159 -AILLSCIHITIKNGHVDMMILLLDYMTSTNTN----------------------------------------------- 190 (285)
T ss_dssp -STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTT-----------------------------------------------
T ss_pred -cCCccHHHHHHHcChHHHHHHHHHcCCCCCcc-----------------------------------------------
Confidence 25778888888777777777777766665544
Q ss_pred CCCCCCCCCCCChH-HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccc
Q 037006 384 GAAINGKDLHGWTA-LHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEAR 456 (541)
Q Consensus 384 g~~~~~~d~~g~t~-L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 456 (541)
|..|+|| ||+|+..|+.+++++|+++|++++..|. .|+..|+.+++++|+++|++++..
T Consensus 191 -------~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~~ 250 (285)
T 3kea_A 191 -------NSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKSD 250 (285)
T ss_dssp -------CCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTTC
T ss_pred -------cCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCCc
Confidence 4455554 5666666666666666666666665552 345566666666666666665543
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.1e-39 Score=299.20 Aligned_cols=219 Identities=26% Similarity=0.347 Sum_probs=170.3
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHHhCCHHHHHHHHHCC--CCCCccCCCCCCcHHHHHHH
Q 037006 240 TWGPIHLALRGGHLEVLKLLLIKGANVNA-LTKDGNTALHLAVEDRRRDCARLLLANG--ARPDIRNARDGDTPLHITAS 316 (541)
Q Consensus 240 ~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~ 316 (541)
|.||||+|+..|+.+++++|++.+.++.. .|..|.||||+|+..|+.+++++|++.| .+++...+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 45667777777777777777766655443 6677777777777777777777777777 33333223567777777777
Q ss_pred cCCHHHHHHHHHcC--CCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCC
Q 037006 317 LGYEQMVKLLLQKG--ANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHG 394 (541)
Q Consensus 317 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g 394 (541)
.|+.+++++|+++| ++++..+..|.||||+|+..|+. +++++|+++|++++.+|..|
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~---------------------~~~~~Ll~~g~~~~~~~~~g 140 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF---------------------EVSQFLIENGASVRIKDKFN 140 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCH---------------------HHHHHHHHTTCCSCCCCTTS
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCH---------------------hHHHHHHHcCCCccccCCCC
Confidence 77777777777777 67777777888887777665554 44677788888888888899
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHcCCHHHHHHHH-HCCCCCcccCCCCCCHHHHHHHcCc
Q 037006 395 WTALHRASFKGKIEVVRMLIDKG-IDVDAKDEDGYTALHCAVESGHTDVTELLV-KKGADVEARTSKNVSPMQIAECLHY 472 (541)
Q Consensus 395 ~t~L~~Aa~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~ 472 (541)
+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||+++|..
T Consensus 141 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~--- 217 (228)
T 2dzn_A 141 QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN--- 217 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS---
T ss_pred CCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH---
Confidence 99999999999999999999998 999999999999999999999999999999 8899999999999999999964
Q ss_pred HHHHHHHHhC
Q 037006 473 AGISRILMHG 482 (541)
Q Consensus 473 ~~i~~~Ll~~ 482 (541)
.+++++|+++
T Consensus 218 ~~~~~~l~~~ 227 (228)
T 2dzn_A 218 EQVKKFFLNN 227 (228)
T ss_dssp TTHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 3667777653
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.8e-38 Score=296.15 Aligned_cols=215 Identities=26% Similarity=0.282 Sum_probs=162.9
Q ss_pred CCHHHHHHHHHCCCCCCCC-CCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCC
Q 037006 218 GEALIVELLLARKASTERS-ETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANG 296 (541)
Q Consensus 218 g~~~iv~~Ll~~g~~~~~~-~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 296 (541)
|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4555666666666665543 566667777777777777777777777777777777777777777777777777777766
Q ss_pred C-CCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHH
Q 037006 297 A-RPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVR 375 (541)
Q Consensus 297 ~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~ 375 (541)
. +++..+ ..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus 82 ~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~--------------------- 139 (223)
T 2f8y_A 82 ATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD--------------------- 139 (223)
T ss_dssp TSCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH---------------------
T ss_pred CCCcccCC-CCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHH---------------------
Confidence 5 555444 56777777777777777777777777777777777777777776655543
Q ss_pred HHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc
Q 037006 376 TMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVE 454 (541)
Q Consensus 376 ~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 454 (541)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.|+.+++++|+++|+...
T Consensus 140 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 140 AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 4666777888888888899999999999999999999999999999999999999999999999999999999998654
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-38 Score=311.53 Aligned_cols=276 Identities=26% Similarity=0.343 Sum_probs=228.4
Q ss_pred HHHHcCCHHHHHHHHhcCCCCC-----CCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHH
Q 037006 142 LLVKDGEMDDLREVLERSDPAW-----NPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAA 216 (541)
Q Consensus 142 ~a~~~g~~~~v~~ll~~~~~~~-----~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~ 216 (541)
.+++.+..+.++.++....... ......+..|.||||+||..|+.++|++|++.|++++..+.. |.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVD-GLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTT-CCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHH
Confidence 4677788888888887543211 112233456789999999999999999999999999998877 9999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHC-
Q 037006 217 AGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLAN- 295 (541)
Q Consensus 217 ~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~- 295 (541)
.|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++++..
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~ 162 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCH
Q 037006 296 GARPDIRNARDGDTPLHITASLGYEQMVKLLLQKG-ANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEV 374 (541)
Q Consensus 296 g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~ 374 (541)
+.+++... ..+.++++ ..+..++..+ ......+..|.||||+|+..|+.+
T Consensus 163 ~~~~~~~~-~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~-------------------- 213 (299)
T 1s70_B 163 GVDIEAAR-KEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE-------------------- 213 (299)
T ss_dssp TCCHHHHH-HHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH--------------------
T ss_pred CCCchhhh-hhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH--------------------
Confidence 55544322 11222222 2344445444 445567788999999998776654
Q ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHC
Q 037006 375 RTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKK 449 (541)
Q Consensus 375 ~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 449 (541)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.. .+.++.|++.
T Consensus 214 -~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 214 -VLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp -HHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG-GHHHHHHHHH
T ss_pred -HHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH-HHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999997654 4555555554
No 38
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.6e-38 Score=294.41 Aligned_cols=221 Identities=23% Similarity=0.310 Sum_probs=133.1
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCC
Q 037006 173 GQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGH 252 (541)
Q Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~ 252 (541)
|.||||+||..|+.++|++|++.|+++.......|.||||+|+..|+.+++++|+++|++
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-------------------- 61 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN-------------------- 61 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT--------------------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc--------------------
Confidence 455666666666666666666555544332222244555555555555555555554422
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCChHHHHHHHhCCHHHHHHHHHCC--CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 037006 253 LEVLKLLLIKGANVNA-LTKDGNTALHLAVEDRRRDCARLLLANG--ARPDIRNARDGDTPLHITASLGYEQMVKLLLQK 329 (541)
Q Consensus 253 ~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 329 (541)
.+++. .+..|.||||+|+..|+.+++++|+++| ++++..+ ..|.||||+|+..|+.+++++|+++
T Consensus 62 -----------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~ 129 (228)
T 2dzn_A 62 -----------VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT-NQGVTCLHLAVGKKWFEVSQFLIEN 129 (228)
T ss_dssp -----------CCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -----------ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCC-cCCCCHHHHHHHcCCHhHHHHHHHc
Confidence 33333 4445555555555555555555555555 4444443 4455555555555556666666666
Q ss_pred CCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHhcCCHH
Q 037006 330 GANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG-AAINGKDLHGWTALHRASFKGKIE 408 (541)
Q Consensus 330 g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~Aa~~g~~~ 408 (541)
|++++..+..|.||||+|+..|+.+ ++++|+++| ++++.+|..|+||||+|+..|+.+
T Consensus 130 g~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 130 GASVRIKDKFNQIPLHRAASVGSLK---------------------LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHH---------------------HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH
Confidence 6665556666666666555544433 355556666 677777888888888888888888
Q ss_pred HHHHHH-HcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHC
Q 037006 409 VVRMLI-DKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKK 449 (541)
Q Consensus 409 ~v~~Ll-~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 449 (541)
++++|+ +.|++++.+|..|+||||+|+.. +++++|+++
T Consensus 189 ~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 189 AAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp HHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred HHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 888888 77888888888888888888654 566666653
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-40 Score=328.31 Aligned_cols=273 Identities=16% Similarity=0.107 Sum_probs=200.2
Q ss_pred cCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC-----------------CCCCchHHH
Q 037006 183 QRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERS-----------------ETSTWGPIH 245 (541)
Q Consensus 183 ~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------------~~~~~t~L~ 245 (541)
....++|++|++.|++++..+.. |.++++ |+.+++++|+++|++++.. .....+.+|
T Consensus 29 ~~~~dlv~~ll~~ga~i~~~~~~-g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 102 (327)
T 1sw6_A 29 TFTHDLTSDFLSSPLKIMKALPS-PVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQH 102 (327)
T ss_dssp ECCTTCCCSTTTSSCCCEECBCC-CCCCCH-----HHHHHHHHHHHHHHC------------------------------
T ss_pred hhcCchHHHHhhCCcccccCCCC-CCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhH
Confidence 45567888888888888887766 777766 8888999998888775541 111122357
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCC---HH
Q 037006 246 LALRGGHLEVLKLLLIKGANVNA-LTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGY---EQ 321 (541)
Q Consensus 246 ~Aa~~g~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~---~~ 321 (541)
.|+..+..+++++|++.|++++. .|..|+||||+|+..|+.++|++|+++|++++..+ ..|.||||+|+..|+ .+
T Consensus 103 ~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d-~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 103 VSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-NMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp -CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-TTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHhcccccHH
Confidence 78888888999999999999999 89999999999999999999999999999999877 789999999999988 67
Q ss_pred HHHHHHHcC-CCccccccCCCchhHHHHH----cCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCh
Q 037006 322 MVKLLLQKG-ANKYIRNKSGKTAYDVAAE----CGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWT 396 (541)
Q Consensus 322 ~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~----~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t 396 (541)
+++.|++.+ ++++..|..|+||||+|+. .|+.++++.+......... ..+...+...+.+.|++++.++..|+|
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~-~~~~~~i~~~~~~~g~~~~~~~~~g~t 260 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV-KKQNRPIQSGTNEKESKPNDKNGERKD 260 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HGGGCCEEEC----------------C
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHh-cccchHHHhhhhcccCCcccccccCCC
Confidence 888888876 6789999999999999998 6777766655211000000 000000001112338999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcC
Q 037006 397 ALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLH 471 (541)
Q Consensus 397 ~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 471 (541)
|||.|+. +++|+++ ++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|
T Consensus 261 ~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 261 SILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred hhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 9999996 9999998 68999999999999999999999999999999999999999999999998654
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-39 Score=316.99 Aligned_cols=249 Identities=17% Similarity=0.094 Sum_probs=190.1
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCC----------------CCCCcHHHHH
Q 037006 151 DLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGR----------------CGCSTPLEAA 214 (541)
Q Consensus 151 ~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------~~~~t~L~~A 214 (541)
++++|++++. +++..|..|.|+++ |+.++|++|+++|++++.... ....+.+|+|
T Consensus 34 lv~~ll~~ga----~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a 104 (327)
T 1sw6_A 34 LTSDFLSSPL----KIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 104 (327)
T ss_dssp CCCSTTTSSC----CCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------C
T ss_pred hHHHHhhCCc----ccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHH
Confidence 3444544442 24556667777766 777777777777766543100 0012345778
Q ss_pred HHcCCHHHHHHHHHCCCCCCC-CCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCC---HHHHH
Q 037006 215 AAAGEALIVELLLARKASTER-SETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRR---RDCAR 290 (541)
Q Consensus 215 ~~~g~~~iv~~Ll~~g~~~~~-~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~---~~~v~ 290 (541)
+..+..+++++|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++..|.+|+||||+|+..|+ .++++
T Consensus 105 ~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~ 184 (327)
T 1sw6_A 105 FDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFE 184 (327)
T ss_dssp HHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHH
T ss_pred HHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHH
Confidence 888888999999999999999 89999999999999999999999999999999999999999999999988 67888
Q ss_pred HHHHCC-CCCCccCCCCCCcHHHHHHH----cCCHHHHHHHHHc--------------------CCCccccccCCCchhH
Q 037006 291 LLLANG-ARPDIRNARDGDTPLHITAS----LGYEQMVKLLLQK--------------------GANKYIRNKSGKTAYD 345 (541)
Q Consensus 291 ~Ll~~g-~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~--------------------g~~~~~~~~~g~t~l~ 345 (541)
.|++.+ ++++..+ ..|.||||+|+. .|+.+++++|++. |++++..+..|.||||
T Consensus 185 ~ll~~~~~~~~~~d-~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~ 263 (327)
T 1sw6_A 185 ALLDYLYPCLILED-SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263 (327)
T ss_dssp HHHHHHGGGGGEEC-TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHH
T ss_pred HHHHhhhccccCCC-CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhH
Confidence 888876 6677776 789999999998 8999999999987 8999999999999999
Q ss_pred HHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Q 037006 346 VAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDE 425 (541)
Q Consensus 346 ~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~ 425 (541)
.|+. +++|+++ +++.+|..|+||||+|+..|+.++|++|+++|+|++.+|.
T Consensus 264 ~a~~---------------------------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 264 ENLD---------------------------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp HHCS---------------------------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHH---------------------------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 8863 6778887 6888999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHcC
Q 037006 426 DGYTALHCAVESG 438 (541)
Q Consensus 426 ~g~tpL~~A~~~g 438 (541)
.|+||||+|+++|
T Consensus 315 ~G~TpL~~A~~~g 327 (327)
T 1sw6_A 315 SGLRPVDFGAGLE 327 (327)
T ss_dssp TSCCGGGGTCC--
T ss_pred CCCCHHHHHHhcC
Confidence 9999999998765
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.5e-36 Score=282.49 Aligned_cols=206 Identities=24% Similarity=0.274 Sum_probs=157.0
Q ss_pred CchHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCC-----CccCCCCCCcHHHH
Q 037006 240 TWGPIHLALRGGHLEVLKLLLIK-GANVNALTKDGNTALHLAVEDRRRDCARLLLANGARP-----DIRNARDGDTPLHI 313 (541)
Q Consensus 240 ~~t~L~~Aa~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----~~~~~~~g~t~L~~ 313 (541)
|+||||+|+..|+.+++++|++. |++++..|..|+||||+|+..|+.+++++|++.|+++ +..+ ..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL-YEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT-TTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC-CCCcCHHHH
Confidence 55666666666666666666665 6666666666666666666666666666666666654 2222 457777777
Q ss_pred HHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCC
Q 037006 314 TASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLH 393 (541)
Q Consensus 314 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~ 393 (541)
|+..|+.+++++|+++|++++..+..... ....+..|..
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~ 120 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVF-----------------------------------------HYRPHNLIYY 120 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGG-----------------------------------------SCCTTCSCCC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcce-----------------------------------------eecccccccC
Confidence 77777777777777777776655433210 0134556778
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHH----HHHHHCCCCC------cccCCCCCCH
Q 037006 394 GWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVT----ELLVKKGADV------EARTSKNVSP 463 (541)
Q Consensus 394 g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v----~~Ll~~ga~~------~~~~~~g~t~ 463 (541)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++. +.+|..|+||
T Consensus 121 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tp 200 (232)
T 2rfa_A 121 GEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTP 200 (232)
T ss_dssp CSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999888 9999999988 5889999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCC
Q 037006 464 MQIAECLHYAGISRILMHGGATKD 487 (541)
Q Consensus 464 l~~A~~~~~~~i~~~Ll~~ga~~~ 487 (541)
|++|+..|+.+++++|+++|+...
T Consensus 201 l~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 201 FKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHhcCccch
Confidence 999999999999999999887654
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.3e-37 Score=289.55 Aligned_cols=201 Identities=29% Similarity=0.379 Sum_probs=130.2
Q ss_pred CCCCCchHHHHHHhcCCHHHHHHHHHcCC----CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHH
Q 037006 236 SETSTWGPIHLALRGGHLEVLKLLLIKGA----NVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPL 311 (541)
Q Consensus 236 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L 311 (541)
.+..|+||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRD-FRGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC-TTCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHH
Confidence 45566777777777777777776666543 567777777777777777777777777777777777666 5677777
Q ss_pred HHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCC
Q 037006 312 HITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKD 391 (541)
Q Consensus 312 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d 391 (541)
|+|+..|+.+++++|++.|+++... ..++..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~------------------------------------------------~~~~~~~ 114 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLH------------------------------------------------SILKATN 114 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSS------------------------------------------------CGGGCCC
T ss_pred HHHHHcCCHHHHHHHHhcccchhHH------------------------------------------------HHhhccC
Confidence 7777777777777777776652210 0123345
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHc
Q 037006 392 LHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDE-DGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECL 470 (541)
Q Consensus 392 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 470 (541)
..|+||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 5566666666666666666666666666666665 666666666666666666666666666666666666666666666
Q ss_pred CcHHHHHHHHhCCCC
Q 037006 471 HYAGISRILMHGGAT 485 (541)
Q Consensus 471 ~~~~i~~~Ll~~ga~ 485 (541)
++.+++++|+++|++
T Consensus 195 ~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 195 PSTRIQQQLGQLTLE 209 (236)
T ss_dssp SCHHHHHHHHTTSCG
T ss_pred CchHHHHHHHHcchh
Confidence 666666666666665
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=6.7e-35 Score=273.74 Aligned_cols=211 Identities=21% Similarity=0.280 Sum_probs=131.9
Q ss_pred CccHHHHHHHcCCHHHHHHHHhc-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-----CCCCCCCchHHHH
Q 037006 173 GQTLLHIAIAQRRPDIVQLLLEF-GPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKAST-----ERSETSTWGPIHL 246 (541)
Q Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~-----~~~~~~~~t~L~~ 246 (541)
|.||||+|+..|+.++|++|++. |++++..+.. |.||||+|+..|+.+++++|+++|+++ +..+..|+||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAM-GETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCC-CCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 55566666666666666655554 5555555444 555555555555555555555555443 3333444444444
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 037006 247 ALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLL 326 (541)
Q Consensus 247 Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 326 (541)
|+..|+.+++++|+++|++++..+..... ....+..+ ..|.||||+|+..|+.+++++|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~--------------------~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVF--------------------HYRPHNLI-YYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGG--------------------SCCTTCSC-CCCSSHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcce--------------------eecccccc-cCCCCHHHHHHHcCCHHHHHHH
Confidence 44444444444444444444443321100 00111111 3689999999999999999999
Q ss_pred HHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCC------CCCCCCCChHHHH
Q 037006 327 LQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAI------NGKDLHGWTALHR 400 (541)
Q Consensus 327 l~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~------~~~d~~g~t~L~~ 400 (541)
+++|++++..|..|+||||+|+..|+.+++..+ +++|+++|+++ +.+|..|+||||+
T Consensus 141 l~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i-----------------~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~ 203 (232)
T 2rfa_A 141 IEHGADIRAQDSLGNTVLHILILQPNKTFACQM-----------------YNLLLSYDGGDHLKSLELVPNNQGLTPFKL 203 (232)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHH-----------------HHHHHHTTCSCSSCCGGGCCCTTSCCHHHH
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHH-----------------HHHHHhcCCchhhhhhhccCCCCCCCHHHH
Confidence 999999999999999999999998888775432 67788888877 4566777777777
Q ss_pred HHhcCCHHHHHHHHHcCCCCCC
Q 037006 401 ASFKGKIEVVRMLIDKGIDVDA 422 (541)
Q Consensus 401 Aa~~g~~~~v~~Ll~~g~d~~~ 422 (541)
|+..|+.+++++|+++|.+...
T Consensus 204 A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 204 AGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp HHHHTCHHHHHHHHHHHHHC--
T ss_pred HHHcCCHHHHHHHHhcCccchh
Confidence 7777777777777777655443
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.9e-36 Score=285.22 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=169.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCC----CccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHH
Q 037006 305 RDGDTPLHITASLGYEQMVKLLLQKGA----NKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRL 380 (541)
Q Consensus 305 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~L 380 (541)
..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.++ +++|
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~---------------------v~~L 64 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEI---------------------AEAL 64 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHH---------------------HHCC
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHH---------------------HHHH
Confidence 456666666666666666666665543 566777777777777777666544 5556
Q ss_pred HHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCC------CCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc
Q 037006 381 IEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGID------VDAKDEDGYTALHCAVESGHTDVTELLVKKGADVE 454 (541)
Q Consensus 381 l~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 454 (541)
+++|++++.++..|+||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 65 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 144 (236)
T 1ikn_D 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144 (236)
T ss_dssp CSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 677778888888899999999999999999999999876 57788899999999999999999999999999999
Q ss_pred ccCC-CCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCcccccchhhhhhcCCCccccccccccCccccCCCCccccCCCCC
Q 037006 455 ARTS-KNVSPMQIAECLHYAGISRILMHGGATKDGIQQTNLRQVSIQFGNGKVGRDQMEGKFGMKKKKLPRPRVMRGSFD 533 (541)
Q Consensus 455 ~~~~-~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (541)
.++. .|.||||+|+..|+.+++++|+++|++++..+..+.+++.++...++..+.+++...|.......+...-..+++
T Consensus 145 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 145 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 224 (236)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHh
Confidence 9998 999999999999999999999999999999999999999999999999999999999876654444333333333
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.3e-34 Score=262.66 Aligned_cols=189 Identities=28% Similarity=0.412 Sum_probs=116.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcC
Q 037006 273 GNTALHLAVEDRRRDCARLLLANGA-RPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECG 351 (541)
Q Consensus 273 g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g 351 (541)
+.|||+.|+..|+.++++.|++.+. +++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVD-TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3444444444444444444444433 444333 34444444444444444444444444444444455555555444443
Q ss_pred CHHHHHHhhcCCchHHHHhhCCHHHHHHHH-HcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCh
Q 037006 352 HSRLFDALKLGDSLCVAARKGEVRTMQRLI-EAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKG-IDVDAKDEDGYT 429 (541)
Q Consensus 352 ~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~d~~~~d~~g~t 429 (541)
+.++ +++|+ ..+.+++..+..|.||||+|+..|+.+++++|+++| ++++.+|..|+|
T Consensus 84 ~~~~---------------------~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 142 (201)
T 3hra_A 84 RTEI---------------------LAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYT 142 (201)
T ss_dssp CHHH---------------------HHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCC
T ss_pred CHHH---------------------HHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCC
Confidence 3332 33344 334566666777777777777777777777777777 777777777777
Q ss_pred HHHHHHHcCC-----HHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q 037006 430 ALHCAVESGH-----TDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGG 483 (541)
Q Consensus 430 pL~~A~~~g~-----~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 483 (541)
|||+|+..++ .+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|
T Consensus 143 ~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 143 ALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 7777777776 77777777777777777777777777777777777777777765
No 46
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.2e-34 Score=256.92 Aligned_cols=158 Identities=39% Similarity=0.575 Sum_probs=117.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCC
Q 037006 309 TPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAIN 388 (541)
Q Consensus 309 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~ 388 (541)
++|+.|+..|+.++|++|++.|++++.+|..|+||+++|+..++.++ +++|+++|++++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~---------------------~~~ll~~gad~~ 64 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEV---------------------VKLLISKGADVN 64 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH---------------------HHHHHHTTCCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHH---------------------HHHHHhcccchh
Confidence 35666777777777777777777777777777777766665555433 556677777777
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 037006 389 GKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAE 468 (541)
Q Consensus 389 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 468 (541)
.+|.+|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|+
T Consensus 65 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~ 144 (169)
T 4gpm_A 65 AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAR 144 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred hhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 77777888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcCcHHHHHHHHhCCCCCC
Q 037006 469 CLHYAGISRILMHGGATKD 487 (541)
Q Consensus 469 ~~~~~~i~~~Ll~~ga~~~ 487 (541)
..|+.+++++|+++||+.+
T Consensus 145 ~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 145 EHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HTTCHHHHHHHHTC-----
T ss_pred HcCCHHHHHHHHHCCCCcC
Confidence 8888888888888888765
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.5e-34 Score=260.75 Aligned_cols=191 Identities=27% Similarity=0.400 Sum_probs=154.7
Q ss_pred CCCchHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHH
Q 037006 238 TSTWGPIHLALRGGHLEVLKLLLIKGA-NVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITAS 316 (541)
Q Consensus 238 ~~~~t~L~~Aa~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 316 (541)
..+.||||.|+..|+.+.++.|+..+. +++..|.+|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN-SISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHH
Confidence 346677777777777777777777654 777777777788888888888888888888877777766 667788888888
Q ss_pred cCCHHHHHHHH-HcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC-CCCCCCCCCC
Q 037006 317 LGYEQMVKLLL-QKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG-AAINGKDLHG 394 (541)
Q Consensus 317 ~g~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g-~~~~~~d~~g 394 (541)
.|+.+++++|+ ..+++++..+..|.||||+|+..|+.+ ++++|+++| ++++.+|..|
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g~~~~~~~~~~g 140 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID---------------------NVKLLLEDGREDIDFQNDFG 140 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH---------------------HHHHHHHHCCCCTTCCCTTS
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH---------------------HHHHHHHcCCCCcCCCCCCC
Confidence 88888888888 456677778888888888777665544 467777887 8888888899
Q ss_pred ChHHHHHHhcCC-----HHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q 037006 395 WTALHRASFKGK-----IEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKG 450 (541)
Q Consensus 395 ~t~L~~Aa~~g~-----~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 450 (541)
+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 141 ~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999998887 89999999999999999999999999999999999999999886
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.4e-35 Score=281.20 Aligned_cols=206 Identities=22% Similarity=0.238 Sum_probs=162.9
Q ss_pred CchHHHHHHhcCCHH----HHHHHHHcCCCCCC----CCCCCChHHHHHHHh---CCHHHHHHHHHCCCCCCccC-----
Q 037006 240 TWGPIHLALRGGHLE----VLKLLLIKGANVNA----LTKDGNTALHLAVED---RRRDCARLLLANGARPDIRN----- 303 (541)
Q Consensus 240 ~~t~L~~Aa~~g~~~----iv~~Ll~~g~~~~~----~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~----- 303 (541)
|+||||.|+..|+.+ ++++|++.|++++. .|..|+||||+|+.. |+.+++++|++.|++++...
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 566777777777765 44555566777776 677777777777777 77777777777766654221
Q ss_pred -----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHH
Q 037006 304 -----ARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQ 378 (541)
Q Consensus 304 -----~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~ 378 (541)
+..|.||||+|+..|+.+++++|+++|++++..+..+.++
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~----------------------------------- 126 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ----------------------------------- 126 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----------------------------------
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc-----------------------------------
Confidence 1458888888888888888888888888877776654321
Q ss_pred HHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHH--cCCHH-------HHHHH
Q 037006 379 RLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLID---KGIDVDAKDEDGYTALHCAVE--SGHTD-------VTELL 446 (541)
Q Consensus 379 ~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~---~g~d~~~~d~~g~tpL~~A~~--~g~~~-------~v~~L 446 (541)
.+.+..+..|+||||+|+..|+.+++++|++ +|+++|.+|..|+||||+|+. .++.+ ++++|
T Consensus 127 ------~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L 200 (256)
T 2etb_A 127 ------KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGL 200 (256)
T ss_dssp ------CCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred ------ccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHH
Confidence 2233445669999999999999999999999 899999999999999999998 78888 99999
Q ss_pred HHCCCCC-------cccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q 037006 447 VKKGADV-------EARTSKNVSPMQIAECLHYAGISRILMHGGATK 486 (541)
Q Consensus 447 l~~ga~~-------~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 486 (541)
+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 201 l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 201 LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 9999999 899999999999999999999999999988753
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.4e-34 Score=252.16 Aligned_cols=159 Identities=42% Similarity=0.605 Sum_probs=116.2
Q ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHH
Q 037006 275 TALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSR 354 (541)
Q Consensus 275 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~ 354 (541)
++|+.|++.|+.++|++|+++|++++..+ ..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 34666666666666666666666666555 55666666666666666666666666666666666666666666554443
Q ss_pred HHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q 037006 355 LFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCA 434 (541)
Q Consensus 355 ~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A 434 (541)
++++|+++|+++|.+|.+|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|
T Consensus 85 ---------------------~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A 143 (169)
T 4gpm_A 85 ---------------------VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLA 143 (169)
T ss_dssp ---------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ---------------------HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 35666777777888888899999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCcc
Q 037006 435 VESGHTDVTELLVKKGADVEA 455 (541)
Q Consensus 435 ~~~g~~~~v~~Ll~~ga~~~~ 455 (541)
++.|+.+++++|+++||+++.
T Consensus 144 ~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 144 REHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHTTCHHHHHHHHTC------
T ss_pred HHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999864
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=5e-35 Score=281.79 Aligned_cols=213 Identities=22% Similarity=0.251 Sum_probs=150.7
Q ss_pred CCCCCCCCCCchHHHHHHhcCCHHHHHHHHH----cCCCCC----CCCCCCChHHHHHHHh---CCHHHHHHHHHCCCCC
Q 037006 231 ASTERSETSTWGPIHLALRGGHLEVLKLLLI----KGANVN----ALTKDGNTALHLAVED---RRRDCARLLLANGARP 299 (541)
Q Consensus 231 ~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~----~g~~~~----~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~ 299 (541)
+..+..+..|+||||+|+..|+.++++.|++ .+.+++ ..|..|+||||+|+.. |+.+++++|++.|+++
T Consensus 4 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred ccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 3344555666666666666666666665554 344444 2356667777777765 6667777777666542
Q ss_pred C-------c--c-CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccc--------------CCCchhHHHHHcCCHHH
Q 037006 300 D-------I--R-NARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNK--------------SGKTAYDVAAECGHSRL 355 (541)
Q Consensus 300 ~-------~--~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------~g~t~l~~A~~~g~~~~ 355 (541)
+ . . .+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~- 162 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA- 162 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH-
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHH-
Confidence 1 1 1 124678888888888888888888888888877776 7999999988776654
Q ss_pred HHHhhcCCchHHHHhhCCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHhcCC---------HHHHHHHHHcCCCCC--
Q 037006 356 FDALKLGDSLCVAARKGEVRTMQRLIE---AGAAINGKDLHGWTALHRASFKGK---------IEVVRMLIDKGIDVD-- 421 (541)
Q Consensus 356 ~~~l~~~~~l~~a~~~~~~~~~~~Ll~---~g~~~~~~d~~g~t~L~~Aa~~g~---------~~~v~~Ll~~g~d~~-- 421 (541)
++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+++|+++|
T Consensus 163 --------------------~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~ 222 (273)
T 2pnn_A 163 --------------------IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222 (273)
T ss_dssp --------------------HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred --------------------HHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccc
Confidence 5888999 999999999999999999999998 899999999999987
Q ss_pred -----CCCCCCChHHHHHHHcCCHHHHHHHHHCCC-CCcccCCCCCCHH
Q 037006 422 -----AKDEDGYTALHCAVESGHTDVTELLVKKGA-DVEARTSKNVSPM 464 (541)
Q Consensus 422 -----~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~g~t~l 464 (541)
.+|..|+||||+|+..|+.+++++|+++|| |.......+.+|-
T Consensus 223 ~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred cccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 489999999999999999999999999999 7777666666553
No 51
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=7.1e-35 Score=280.72 Aligned_cols=205 Identities=21% Similarity=0.269 Sum_probs=173.8
Q ss_pred CCCCCCCCCCCChHHHHHHHhCCHHHHHHHHH----CCCCCCc---cCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCC
Q 037006 263 GANVNALTKDGNTALHLAVEDRRRDCARLLLA----NGARPDI---RNARDGDTPLHITASL---GYEQMVKLLLQKGAN 332 (541)
Q Consensus 263 g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~---~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~ 332 (541)
++..+..|..|+||||+|+..|+.++|+.|++ .+++++. ..+..|.||||+|+.. |+.+++++|++.|++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 55667789999999999999999998888886 5666542 2347899999999987 999999999999865
Q ss_pred c-------cc----cccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCC---------
Q 037006 333 K-------YI----RNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDL--------- 392 (541)
Q Consensus 333 ~-------~~----~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~--------- 392 (541)
+ +. .|..|.||||+|+..|+.+ ++++|+++|++++..+.
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~---------------------~v~~Ll~~ga~~~~~~~~~~~~~~~~ 141 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMT---------------------LVTLLVENGADVQAAANGDFFKKTKG 141 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHH---------------------HHHHHHHTTCCTTCCBCSGGGSSCSS
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHH---------------------HHHHHHHCCCCcCccccccccccccc
Confidence 3 22 5678999999998776654 58889999999999987
Q ss_pred -----CCChHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHHcCC---------HHHHHHHHHCCCCCc-
Q 037006 393 -----HGWTALHRASFKGKIEVVRMLID---KGIDVDAKDEDGYTALHCAVESGH---------TDVTELLVKKGADVE- 454 (541)
Q Consensus 393 -----~g~t~L~~Aa~~g~~~~v~~Ll~---~g~d~~~~d~~g~tpL~~A~~~g~---------~~~v~~Ll~~ga~~~- 454 (541)
.|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+++|++++
T Consensus 142 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 142 RPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp SCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 79999999999999999999999 999999999999999999999998 899999999999997
Q ss_pred ------ccCCCCCCHHHHHHHcCcHHHHHHHHhCCC-CCCC
Q 037006 455 ------ARTSKNVSPMQIAECLHYAGISRILMHGGA-TKDG 488 (541)
Q Consensus 455 ------~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga-~~~~ 488 (541)
.+|..|+||||+|+..|+.+++++|+++|| ++..
T Consensus 222 ~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 222 TLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC----
T ss_pred ccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh
Confidence 489999999999999999999999999999 5543
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.1e-33 Score=266.60 Aligned_cols=209 Identities=23% Similarity=0.329 Sum_probs=132.4
Q ss_pred CccHHHHHHHcCCHH----HHHHHHhcCCCCcc----cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCc
Q 037006 173 GQTLLHIAIAQRRPD----IVQLLLEFGPDVES----QGRCGCSTPLEAAAAA---GEALIVELLLARKASTERSETSTW 241 (541)
Q Consensus 173 g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~----~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~ 241 (541)
|+||||+||..|+.+ ++++|++.|++++. .+.. |.||||+|+.. |+.+++++|++.|++++..+.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~-g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~--- 77 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGST-GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP--- 77 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTT-TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC---
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCC-CCCHHHHHHHccccchHHHHHHHHhcCCcccchhh---
Confidence 667777777777775 55666667777766 4443 66777777776 777777777766665543220
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCC------------CCCc
Q 037006 242 GPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNAR------------DGDT 309 (541)
Q Consensus 242 t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~------------~g~t 309 (541)
++ .......|..|.||||+|+..|+.+++++|+++|++++..+.. .|.|
T Consensus 78 -----------------~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~t 138 (256)
T 2etb_A 78 -----------------LV--NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGEL 138 (256)
T ss_dssp -----------------GG--GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSS
T ss_pred -----------------hc--ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCC
Confidence 00 0001122344556666666666666666666655555554422 3899
Q ss_pred HHHHHHHcCCHHHHHHHHH---cCCCccccccCCCchhHHHHH--cCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC
Q 037006 310 PLHITASLGYEQMVKLLLQ---KGANKYIRNKSGKTAYDVAAE--CGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG 384 (541)
Q Consensus 310 ~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~l~~A~~--~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g 384 (541)
|||+|+..|+.+++++|++ .|++++..|..|+||||+|+. .++.+..+.+ .+++++|+++|
T Consensus 139 pL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~--------------~~iv~~Ll~~g 204 (256)
T 2etb_A 139 PLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALV--------------IHMYDGLLQMG 204 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH--------------HHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHH--------------HHHHHHHHHcC
Confidence 9999999999999999999 899999999999999999988 5555532211 23456666666
Q ss_pred CCC-------CCCCCCCChHHHHHHhcCCHHHHHHHHHcCC
Q 037006 385 AAI-------NGKDLHGWTALHRASFKGKIEVVRMLIDKGI 418 (541)
Q Consensus 385 ~~~-------~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 418 (541)
+++ +.+|..|+||||+|+..|+.+++++|+++|.
T Consensus 205 a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 205 ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 665 5555555555555555555555555555543
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4.5e-33 Score=266.04 Aligned_cols=160 Identities=24% Similarity=0.302 Sum_probs=134.8
Q ss_pred CCcHHHHHH---HcCCHHHHHHHHHcC-----------CCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhC
Q 037006 307 GDTPLHITA---SLGYEQMVKLLLQKG-----------ANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKG 372 (541)
Q Consensus 307 g~t~L~~A~---~~g~~~~v~~Ll~~g-----------~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~ 372 (541)
|.||||+|+ ..|+.+++++|++.| .+.+..|..|+||||+|+..|+.+
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~------------------ 107 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKH------------------ 107 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHH------------------
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHH------------------
Confidence 444444444 334444555544443 334555668999999998876654
Q ss_pred CHHHHHHHHHcCCCCCCCC--------------CCCChHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCChHHHHHH
Q 037006 373 EVRTMQRLIEAGAAINGKD--------------LHGWTALHRASFKGKIEVVRMLID---KGIDVDAKDEDGYTALHCAV 435 (541)
Q Consensus 373 ~~~~~~~Ll~~g~~~~~~d--------------~~g~t~L~~Aa~~g~~~~v~~Ll~---~g~d~~~~d~~g~tpL~~A~ 435 (541)
++++|+++|++++..+ ..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+
T Consensus 108 ---~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~ 184 (260)
T 3jxi_A 108 ---YVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALV 184 (260)
T ss_dssp ---HHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHH
T ss_pred ---HHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHH
Confidence 5888999999999998 689999999999999999999999 99999999999999999999
Q ss_pred HcCC---------HHHHHHHHHCCCCC-------cccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC
Q 037006 436 ESGH---------TDVTELLVKKGADV-------EARTSKNVSPMQIAECLHYAGISRILMHGGATKD 487 (541)
Q Consensus 436 ~~g~---------~~~v~~Ll~~ga~~-------~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~ 487 (541)
..++ .+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 185 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 185 AIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9888 79999999999999 6799999999999999999999999999987643
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=9.5e-33 Score=263.80 Aligned_cols=195 Identities=22% Similarity=0.269 Sum_probs=144.7
Q ss_pred CCchHHHHHHhcCCHHH----HHHHHHcCCCCCCCC----CCCChHHHHHH---HhCCHHHHHHHHHCCCCC--------
Q 037006 239 STWGPIHLALRGGHLEV----LKLLLIKGANVNALT----KDGNTALHLAV---EDRRRDCARLLLANGARP-------- 299 (541)
Q Consensus 239 ~~~t~L~~Aa~~g~~~i----v~~Ll~~g~~~~~~d----~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~~-------- 299 (541)
.++++||.|+..|+.+. +++|++.|++++..+ ..|.||||+|+ ..|+.+++++|++.|+++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 34555555555555553 233333555555443 44556666555 445556666666555331
Q ss_pred ---CccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccc--------------cCCCchhHHHHHcCCHHHHHHhhcC
Q 037006 300 ---DIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRN--------------KSGKTAYDVAAECGHSRLFDALKLG 362 (541)
Q Consensus 300 ---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~A~~~g~~~~~~~l~~~ 362 (541)
+..+ ..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+
T Consensus 84 ~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~-------- 154 (260)
T 3jxi_A 84 SPFRDVY-YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH-------- 154 (260)
T ss_dssp CCBCCSS-EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHH--------
T ss_pred ccccccc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHH--------
Confidence 1111 357777777777777777777777777777776 68999999998776654
Q ss_pred CchHHHHhhCCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHhcCC---------HHHHHHHHHcCCCC-------CCC
Q 037006 363 DSLCVAARKGEVRTMQRLIE---AGAAINGKDLHGWTALHRASFKGK---------IEVVRMLIDKGIDV-------DAK 423 (541)
Q Consensus 363 ~~l~~a~~~~~~~~~~~Ll~---~g~~~~~~d~~g~t~L~~Aa~~g~---------~~~v~~Ll~~g~d~-------~~~ 423 (541)
++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+++|+++ +.+
T Consensus 155 -------------~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 221 (260)
T 3jxi_A 155 -------------IVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALL 221 (260)
T ss_dssp -------------HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCC
T ss_pred -------------HHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcc
Confidence 5888999 999999999999999999999888 79999999999998 679
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCcc
Q 037006 424 DEDGYTALHCAVESGHTDVTELLVKKGADVEA 455 (541)
Q Consensus 424 d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 455 (541)
|..|+||||+|+..|+.+++++|+++|++...
T Consensus 222 d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 222 NNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999876543
No 55
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=100.00 E-value=9.3e-36 Score=297.37 Aligned_cols=285 Identities=13% Similarity=0.088 Sum_probs=202.1
Q ss_pred HHHHHHHH-cCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCc---ccCCCCCCcHHHH
Q 037006 138 PVLVLLVK-DGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVE---SQGRCGCSTPLEA 213 (541)
Q Consensus 138 ~~l~~a~~-~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~~~t~L~~ 213 (541)
+.++.+.. .++.+.++++++.+ .++.||||+||..|+.++|++|++.|+... ..+.. +.||||+
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g-----------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~-~~tpL~~ 134 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKG-----------IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-NYQAFRL 134 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHT-----------CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHH-HHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHcC-----------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccC-CCCHHHH
Confidence 34555554 46778888888765 345699999999999999999999998321 12222 6789999
Q ss_pred HHHcCCHHHHHHHHHCCCCC---CCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCC--CCCCCChHHHHHH-HhCCHH
Q 037006 214 AAAAGEALIVELLLARKAST---ERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNA--LTKDGNTALHLAV-EDRRRD 287 (541)
Q Consensus 214 A~~~g~~~iv~~Ll~~g~~~---~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~--~d~~g~t~L~~A~-~~g~~~ 287 (541)
|+..|+.++|++|+++|+++ +..+.. +||||+|+..|+.+++++|+++|++++. .|..|.||||+|+ ..|+.+
T Consensus 135 Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 135 AAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred HHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 99999999999999999752 222223 8999999999999999999999999887 8888999999999 999999
Q ss_pred HHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHH
Q 037006 288 CARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCV 367 (541)
Q Consensus 288 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~ 367 (541)
+|++|++.|+ .|.|||++|+..|+.+++++|+++|++++..+ ++++.|+.+|+.++++...
T Consensus 214 iv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~------- 274 (376)
T 2aja_A 214 VINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSE------- 274 (376)
T ss_dssp HHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHH-------
T ss_pred HHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHh-------
Confidence 9999999774 27899999999999999999999998876654 4788888888877543210
Q ss_pred HHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHc---------CCCCCCCCCCCChHHHHHHHcC
Q 037006 368 AARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDK---------GIDVDAKDEDGYTALHCAVESG 438 (541)
Q Consensus 368 a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~---------g~d~~~~d~~g~tpL~~A~~~g 438 (541)
+ .....+++.|+..+. .+..+.+++|++. |+++ +.+.||||+|+..|
T Consensus 275 -~-~~~~~~~~~li~~~~------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~----n~~~~~L~~A~~~g 330 (376)
T 2aja_A 275 -C-LQGFYMLRNLIRRND------------------EVLLDDIRFLLSIPGIKALAPTATIP----GDANELLRLALRLG 330 (376)
T ss_dssp -H-HHHHHHHHHHHHHCC------------------GGGHHHHHHHHTSTTTGGGSSCCSST----TCCCHHHHHHHHHT
T ss_pred -h-hhhHHHHHHHHHcch------------------hhHHHHHHHHHhChhhhhhhccCCCC----CCccHHHHHHHHcC
Confidence 0 001124555555541 1235666777663 4444 35678999999999
Q ss_pred CHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHh
Q 037006 439 HTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMH 481 (541)
Q Consensus 439 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~ 481 (541)
+.+++++|++.| ..++..++|++.+|...|+.++.+.-+.
T Consensus 331 ~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (376)
T 2aja_A 331 NQGACALLLSIP---SVLALTKANNYYINETGGRLDLRAVALE 370 (376)
T ss_dssp CTTHHHHHTTSH---HHHHSCC---------------------
T ss_pred cHHHHHHHHcCh---HHHHHHHHhccccccccccccHHHHHHH
Confidence 999999999876 5567788999999999999998877654
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=258.63 Aligned_cols=191 Identities=25% Similarity=0.341 Sum_probs=131.4
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCC--CCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccccCCCchhHHHHHcCC
Q 037006 276 ALHLAVEDRRRDCARLLLANGAR--PDIRNARDGDTPLHITASLGYEQMVKLLLQKGA-NKYIRNKSGKTAYDVAAECGH 352 (541)
Q Consensus 276 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~g~ 352 (541)
++|.|+..++.+.++.+++.+.+ ++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+..|.||+++|+....
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVNIAD-SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 33444444444444444433322 33333 345555555555555555555555554 555555555555555542211
Q ss_pred HHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHH
Q 037006 353 SRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALH 432 (541)
Q Consensus 353 ~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~ 432 (541)
...++.+++++|++.|.+++..+..|+||||+|+..|+.++|++|+++|+|+|.+|..|+||||
T Consensus 158 ----------------~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 158 ----------------KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALM 221 (276)
T ss_dssp ----------------CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ----------------hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 1223445677777777777777888888888888888889999999888888888888999999
Q ss_pred HHHHcCCHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q 037006 433 CAVESGHTDVTELLVK-KGADVEARTSKNVSPMQIAECLHYAGISRILMHGG 483 (541)
Q Consensus 433 ~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 483 (541)
+|+..|+.+++++|++ .|++++.+|..|+|||++|+..|+.+++++|++++
T Consensus 222 ~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 222 CACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999899999998888 78888888888999999999889999998888754
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=257.05 Aligned_cols=186 Identities=28% Similarity=0.400 Sum_probs=132.2
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCC--CCCCCCCCChHHHHHHHhCCHHHHHHHHHCCC-CCCccCCCCCCcHHHHHH----
Q 037006 243 PIHLALRGGHLEVLKLLLIKGAN--VNALTKDGNTALHLAVEDRRRDCARLLLANGA-RPDIRNARDGDTPLHITA---- 315 (541)
Q Consensus 243 ~L~~Aa~~g~~~iv~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~---- 315 (541)
++|.|+..|+.+.++.+++.+.+ ++..|.+|+||||+|+..|+.+++++|++.|+ +++..+ ..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALATL 157 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHHHh
Confidence 44445555555555555444333 55556666666666666666666666666665 555444 55666666666
Q ss_pred -HcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCC
Q 037006 316 -SLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHG 394 (541)
Q Consensus 316 -~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g 394 (541)
..++.+++++|++.|.+.+..+..|+||||+|+..|+.+ ++++|+++|+++|.+|..|
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~---------------------~v~~Ll~~gad~n~~d~~G 216 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVD---------------------VVKALLACEADVNVQDDDG 216 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHH---------------------HHHHHHHTTCCTTCCCTTS
T ss_pred hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH---------------------HHHHHHhCCCCCCCCCCCC
Confidence 456666777777777666666677777777766655443 3666777777888888889
Q ss_pred ChHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q 037006 395 WTALHRASFKGKIEVVRMLID-KGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKG 450 (541)
Q Consensus 395 ~t~L~~Aa~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 450 (541)
+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 217 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 217 STALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999 79999999999999999999999999999999874
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.5e-30 Score=236.66 Aligned_cols=158 Identities=23% Similarity=0.334 Sum_probs=112.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC
Q 037006 305 RDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG 384 (541)
Q Consensus 305 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g 384 (541)
..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+. +++++|+++|
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~---------------------~~v~~Ll~~g 91 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRL---------------------GIAEKLLSKG 91 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCH---------------------HHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCH---------------------HHHHHHHHCC
Confidence 4455666666666666666666666666665666666666655554443 3355566666
Q ss_pred CCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 037006 385 AAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPM 464 (541)
Q Consensus 385 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l 464 (541)
++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+
T Consensus 92 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 171 (192)
T 2rfm_A 92 SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAE 171 (192)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 66676777777777777777788888888888888887777788888888888888888888888888887777788888
Q ss_pred HHHHHcCcHHHHHHHHhCC
Q 037006 465 QIAECLHYAGISRILMHGG 483 (541)
Q Consensus 465 ~~A~~~~~~~i~~~Ll~~g 483 (541)
++|+..|+.+++++|+++|
T Consensus 172 ~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 172 ASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHhcc
Confidence 8888888888888877653
No 59
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=3.3e-30 Score=229.19 Aligned_cols=158 Identities=32% Similarity=0.454 Sum_probs=125.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC
Q 037006 305 RDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG 384 (541)
Q Consensus 305 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g 384 (541)
..+.++|+.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+ ++++|+++|
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g 70 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE---------------------IVEVLLKNG 70 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHTT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH---------------------HHHHHHHcC
Confidence 34556777777777777777777777777777777777777766655443 366677777
Q ss_pred CCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 037006 385 AAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPM 464 (541)
Q Consensus 385 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l 464 (541)
++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 71 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 71 ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAF 150 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 77777888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHcCcHHHHHHHHhCC
Q 037006 465 QIAECLHYAGISRILMHGG 483 (541)
Q Consensus 465 ~~A~~~~~~~i~~~Ll~~g 483 (541)
++|+..|+.+++++|++.|
T Consensus 151 ~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 151 DISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHhCCHHHHHHHHHcC
Confidence 8888888888888888775
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.4e-30 Score=229.75 Aligned_cols=157 Identities=29% Similarity=0.387 Sum_probs=117.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCC
Q 037006 307 GDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAA 386 (541)
Q Consensus 307 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~ 386 (541)
..|||+.|+..|+.+++++|++.|++++..+..|+||||+|+. |+. +++++|+++|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~---------------------~~v~~Ll~~g~~ 62 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNP---------------------EIARRLLLRGAN 62 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCH---------------------HHHHHHHHTTCC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcH---------------------HHHHHHHHcCCC
Confidence 4566777777777777777777777776667777777666554 443 346666777777
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCC-CcccCCCCCCHHH
Q 037006 387 INGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGAD-VEARTSKNVSPMQ 465 (541)
Q Consensus 387 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~l~ 465 (541)
++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|||+
T Consensus 63 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~ 142 (162)
T 1ihb_A 63 PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACD 142 (162)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHH
Confidence 777777788888888888888888888888888888888888888888888888888888888876 5777888888888
Q ss_pred HHHHcCcHHHHHHHHhCCCC
Q 037006 466 IAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 466 ~A~~~~~~~i~~~Ll~~ga~ 485 (541)
+|+..|+.+++++|+++||+
T Consensus 143 ~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 143 LARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHTTCHHHHHHHHHTC--
T ss_pred HHHHcCCHHHHHHHHHhCCC
Confidence 88888888888888888774
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=3e-30 Score=234.58 Aligned_cols=163 Identities=25% Similarity=0.238 Sum_probs=154.7
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHH
Q 037006 166 ADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIH 245 (541)
Q Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~ 245 (541)
.+.+|..|.||||+||..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIE-GSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccccc-CccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 3557889999999999999999999999999999988876 899999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHH
Q 037006 246 LALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKL 325 (541)
Q Consensus 246 ~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 325 (541)
+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+..|+.+++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD-LTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHhCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887 789999999999999999999
Q ss_pred HHHcC
Q 037006 326 LLQKG 330 (541)
Q Consensus 326 Ll~~g 330 (541)
|++.|
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 99864
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.5e-30 Score=232.10 Aligned_cols=167 Identities=24% Similarity=0.317 Sum_probs=77.5
Q ss_pred hHHHHHHHhCCHHHHHHHHHCCCC-CCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCH
Q 037006 275 TALHLAVEDRRRDCARLLLANGAR-PDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHS 353 (541)
Q Consensus 275 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~ 353 (541)
||||+|+..|+.+++++|++.+.+ ++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 344444444444444444444433 22222 3344444444444444444444444444444444444444444333332
Q ss_pred HHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHH
Q 037006 354 RLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHC 433 (541)
Q Consensus 354 ~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~ 433 (541)
+ ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 83 ~---------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 141 (172)
T 3v30_A 83 D---------------------IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL 141 (172)
T ss_dssp H---------------------HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred H---------------------HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 2 2333444444445455555555555555555555555555555555555555555555
Q ss_pred HHHcCCHHHHHHHHHCCCCCcccCCCCCCH
Q 037006 434 AVESGHTDVTELLVKKGADVEARTSKNVSP 463 (541)
Q Consensus 434 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~ 463 (541)
|+..|+.+++++|+++|+++..++..|.||
T Consensus 142 A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 142 AVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 555555555555555555555555555444
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.6e-30 Score=228.43 Aligned_cols=159 Identities=25% Similarity=0.293 Sum_probs=132.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCC
Q 037006 306 DGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGA 385 (541)
Q Consensus 306 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~ 385 (541)
.|.||||.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+ ++++|+++|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g~ 60 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIA---------------------VVEFLLQNGA 60 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHTTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHH---------------------HHHHHHHcCC
Confidence 4677888888888888888888888777777888888877777665544 4667778888
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHH
Q 037006 386 AINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQ 465 (541)
Q Consensus 386 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 465 (541)
+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||++
T Consensus 61 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 140 (167)
T 3v31_A 61 DPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMD 140 (167)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 88888888888888888888888888888888888888888888999888888888888888888888888888889999
Q ss_pred HHHHcCcHHHHHHHHhCCCC
Q 037006 466 IAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 466 ~A~~~~~~~i~~~Ll~~ga~ 485 (541)
+|+..|+.+++++|++++++
T Consensus 141 ~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 141 LAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHH
Confidence 98888888888888887654
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.9e-30 Score=229.43 Aligned_cols=169 Identities=26% Similarity=0.327 Sum_probs=134.9
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCC-CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcC
Q 037006 173 GQTLLHIAIAQRRPDIVQLLLEFGPD-VESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGG 251 (541)
Q Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g 251 (541)
+.||||+|+..|+.++|++|++.+.+ ++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDER-GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTT-SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence 45788888888888888888888876 5555554 788888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 037006 252 HLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGA 331 (541)
Q Consensus 252 ~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 331 (541)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+..|+.+++++|+++|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEA-DSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 8888888888888888888888888888888888888888888888888776 678888888888888888888888888
Q ss_pred CccccccCCCch
Q 037006 332 NKYIRNKSGKTA 343 (541)
Q Consensus 332 ~~~~~~~~g~t~ 343 (541)
+....+..|.||
T Consensus 160 ~~~~~~~~~~~p 171 (172)
T 3v30_A 160 KLFQSNLVPADP 171 (172)
T ss_dssp HHSCC-------
T ss_pred HHhcccCCCCCC
Confidence 877777777665
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=4.2e-33 Score=260.48 Aligned_cols=200 Identities=20% Similarity=0.157 Sum_probs=123.3
Q ss_pred HHHHHhcCCCCcccCCC--CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCC
Q 037006 189 VQLLLEFGPDVESQGRC--GCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANV 266 (541)
Q Consensus 189 v~~Ll~~g~~~~~~~~~--~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~ 266 (541)
|+.|++.|++++..+.. .+.|||++|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 35566666665543322 2445666677777777777777666666666677777777777777777777777777777
Q ss_pred CCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHH--HHcCCHHHHHHHHHcCCCccccccCCCchh
Q 037006 267 NALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHIT--ASLGYEQMVKLLLQKGANKYIRNKSGKTAY 344 (541)
Q Consensus 267 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 344 (541)
+..|..|+||||+|+..|+.+++++|++.|++++..++..|.||||+| +..|+.+++++|++.|++++..+..|.+++
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 777777777777777777777777777777777766545677777777 677777777777777777777666666666
Q ss_pred HHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCC--CCCCCCCCChHHHHHHhcCCHHHHHH
Q 037006 345 DVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAA--INGKDLHGWTALHRASFKGKIEVVRM 412 (541)
Q Consensus 345 ~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~--~~~~d~~g~t~L~~Aa~~g~~~~v~~ 412 (541)
+.++..+. .++|++.|++ ++.+|..|+||||+|+..|+.++|+.
T Consensus 161 ~~~~~~~~------------------------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 161 WDYSAEFG------------------------DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp SCBCCSST------------------------TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred HHHhhccc------------------------cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 54332221 1224444554 44455556666666666555555543
No 66
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=1.8e-33 Score=280.80 Aligned_cols=272 Identities=15% Similarity=0.091 Sum_probs=190.2
Q ss_pred CccHHHHHHH-cCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCchHHHHHH
Q 037006 173 GQTLLHIAIA-QRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKAST---ERSETSTWGPIHLAL 248 (541)
Q Consensus 173 g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~---~~~~~~~~t~L~~Aa 248 (541)
+.+++++|.. .++.+++++|++.|.+ +.||||+|+..|+.+++++|+++|+.. +..+..+.||||+|+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~--------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa 136 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIK--------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCC--------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCC--------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH
Confidence 4567888877 5788999999998876 459999999999999999999998732 234456788999999
Q ss_pred hcCCHHHHHHHHHcCCCC---CCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCc--cCCCCCCcHHHHHH-HcCCHHH
Q 037006 249 RGGHLEVLKLLLIKGANV---NALTKDGNTALHLAVEDRRRDCARLLLANGARPDI--RNARDGDTPLHITA-SLGYEQM 322 (541)
Q Consensus 249 ~~g~~~iv~~Ll~~g~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~~g~t~L~~A~-~~g~~~~ 322 (541)
..|+.++|++|+++|+++ +..+.+ .||||+|+..|+.++|++|+++|++++. .+ ..|.||||+|+ ..|+.++
T Consensus 137 ~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d-~~g~TpL~~Aa~~~G~~ei 214 (376)
T 2aja_A 137 ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQ-AENYYAFRWAAVGRGHHNV 214 (376)
T ss_dssp HTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHH-HHHHHHHHHHHSTTCCHHH
T ss_pred HcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccC-CCCCCHHHHHHHHCCCHHH
Confidence 999999999999999752 222223 8999999999999999999999998765 44 56889999999 9999999
Q ss_pred HHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 037006 323 VKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRAS 402 (541)
Q Consensus 323 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa 402 (541)
+++|++.|+ .|.||+++|+.+|+.++ +++|+++|++++..+ ++++.|+
T Consensus 215 v~~Ll~~ga-------~~~taL~~Aa~~g~~ev---------------------v~lL~~~ga~~~~~~----~~l~~A~ 262 (376)
T 2aja_A 215 INFLLDCPV-------MLAYAEIHEFEYGEKYV---------------------NPFIARHVNRLKEMH----DAFKLSN 262 (376)
T ss_dssp HHHHTTSHH-------HHHHHHHCTTTTTTTTH---------------------HHHHHHHHHHHHHHH----TTTTTTS
T ss_pred HHHHHhCCC-------ccchHHHHHHHCCCHHH---------------------HHHHHhcCccccccc----HHHHHHH
Confidence 999998764 26788887777666654 666777777766544 4677888
Q ss_pred hcCCHHH------------HHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHC---------CCCCcccCCCCC
Q 037006 403 FKGKIEV------------VRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKK---------GADVEARTSKNV 461 (541)
Q Consensus 403 ~~g~~~~------------v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~---------ga~~~~~~~~g~ 461 (541)
..|+.++ ++.|+..+. .+..+.+++|++. |++++ .+.
T Consensus 263 ~~g~~~vv~~~~~~~~~~~~~~li~~~~------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~n----~~~ 320 (376)
T 2aja_A 263 PDGVFDLVTKSECLQGFYMLRNLIRRND------------------EVLLDDIRFLLSIPGIKALAPTATIPG----DAN 320 (376)
T ss_dssp SSSCCCCSSHHHHHHHHHHHHHHHHHCC------------------GGGHHHHHHHHTSTTTGGGSSCCSSTT----CCC
T ss_pred HCCChhhhcHHhhhhhHHHHHHHHHcch------------------hhHHHHHHHHHhChhhhhhhccCCCCC----Ccc
Confidence 8887663 345555431 1235667777763 44443 456
Q ss_pred CHHHHHHHcCcHHHHHHHHhCCCCCCCCcccccchhhhhhcCCCcccccc
Q 037006 462 SPMQIAECLHYAGISRILMHGGATKDGIQQTNLRQVSIQFGNGKVGRDQM 511 (541)
Q Consensus 462 t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (541)
|||++|+..|+.+++++|++.|... +..+.++...+-..++.+..++
T Consensus 321 ~~L~~A~~~g~~e~v~lLl~~~~v~---~~~~~~~~~~~~~~~~~~~~~~ 367 (376)
T 2aja_A 321 ELLRLALRLGNQGACALLLSIPSVL---ALTKANNYYINETGGRLDLRAV 367 (376)
T ss_dssp HHHHHHHHHTCTTHHHHHTTSHHHH---HSCC------------------
T ss_pred HHHHHHHHcCcHHHHHHHHcChHHH---HHHHHhccccccccccccHHHH
Confidence 8999999999999999999876432 2233333444555555554443
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2.2e-29 Score=223.81 Aligned_cols=160 Identities=33% Similarity=0.425 Sum_probs=140.9
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHH
Q 037006 169 ADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLAL 248 (541)
Q Consensus 169 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa 248 (541)
....+.++|++||..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDAS-GWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 3456778999999999999999999999998887776 889999999999999999999999999988889999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 037006 249 RGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQ 328 (541)
Q Consensus 249 ~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 328 (541)
..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+..|+.+++++|++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD-KFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988777 778999999999999999999987
Q ss_pred cC
Q 037006 329 KG 330 (541)
Q Consensus 329 ~g 330 (541)
.|
T Consensus 168 ~G 169 (169)
T 2y1l_E 168 LN 169 (169)
T ss_dssp C-
T ss_pred cC
Confidence 65
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.5e-29 Score=223.22 Aligned_cols=158 Identities=28% Similarity=0.358 Sum_probs=138.3
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcC
Q 037006 172 QGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGG 251 (541)
Q Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g 251 (541)
...||||+|+..|+.++|++|++.|++++..+.. |.||||+|+. |+.+++++|+++|++++..+..|+||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTT-SCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCcc-CccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4568999999999999999999999988887776 8899999888 9999999999999999988889999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCC-CccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 037006 252 HLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARP-DIRNARDGDTPLHITASLGYEQMVKLLLQKG 330 (541)
Q Consensus 252 ~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 330 (541)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++. +..+ ..|.||||+|+..|+.+++++|+++|
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN-HKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999998884 5555 77899999999999999999999988
Q ss_pred CC
Q 037006 331 AN 332 (541)
Q Consensus 331 ~~ 332 (541)
++
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 75
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=2e-29 Score=223.56 Aligned_cols=159 Identities=26% Similarity=0.345 Sum_probs=142.5
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcC
Q 037006 172 QGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGG 251 (541)
Q Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g 251 (541)
.|.||||+|+..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEE-GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 4778999999999999999999999888888776 889999999999999999999999999988888999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 037006 252 HLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGA 331 (541)
Q Consensus 252 ~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 331 (541)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+..|+.+++++|++++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET-DSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988877 778999999999999999999988765
Q ss_pred C
Q 037006 332 N 332 (541)
Q Consensus 332 ~ 332 (541)
+
T Consensus 160 ~ 160 (167)
T 3v31_A 160 K 160 (167)
T ss_dssp H
T ss_pred H
Confidence 4
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.5e-29 Score=227.19 Aligned_cols=166 Identities=24% Similarity=0.233 Sum_probs=135.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC
Q 037006 306 DGDTPLHITASLGYEQMVKLLLQK-GANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG 384 (541)
Q Consensus 306 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g 384 (541)
.+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+ ++++|+++|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g 62 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSA---------------------VVEMLIMRG 62 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHH---------------------HHHHHHHcC
Confidence 466777777777887877777776 5567777777888877776665544 466777888
Q ss_pred CCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 037006 385 AAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPM 464 (541)
Q Consensus 385 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l 464 (541)
++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||+
T Consensus 63 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 142 (179)
T 3f6q_A 63 ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142 (179)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGG
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcH
Confidence 88888888888999999999999999999999999999888999999999999999999999999999998899999999
Q ss_pred HHHHHcCcHHHHHHHHhCCCCCCCCccc
Q 037006 465 QIAECLHYAGISRILMHGGATKDGIQQT 492 (541)
Q Consensus 465 ~~A~~~~~~~i~~~Ll~~ga~~~~~~~~ 492 (541)
++|+..++.+++++|+++|++++.....
T Consensus 143 ~~A~~~~~~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 143 DKAKAPLRELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCCSCBCCC
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccCCcc
Confidence 9998888899999999998887654433
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-29 Score=218.70 Aligned_cols=149 Identities=32% Similarity=0.434 Sum_probs=105.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCC
Q 037006 309 TPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAIN 388 (541)
Q Consensus 309 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~ 388 (541)
|+|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+ ++++|+++|++++
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g~~~~ 61 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFS---------------------TTEVLLRAGVSRD 61 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHH---------------------HHHHHHTTTCCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHH---------------------HHHHHHHcCCCCC
Confidence 45555555555555555555555443 3555555555555444333 3455555666666
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 037006 389 GKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAE 468 (541)
Q Consensus 389 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 468 (541)
.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+
T Consensus 62 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 141 (153)
T 1awc_B 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISI 141 (153)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 67777778888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcCcHHHHHHH
Q 037006 469 CLHYAGISRIL 479 (541)
Q Consensus 469 ~~~~~~i~~~L 479 (541)
..|+.+++++|
T Consensus 142 ~~~~~~i~~~L 152 (153)
T 1awc_B 142 DNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 88888888776
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.9e-32 Score=256.06 Aligned_cols=182 Identities=21% Similarity=0.167 Sum_probs=103.4
Q ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCH
Q 037006 274 NTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHS 353 (541)
Q Consensus 274 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~ 353 (541)
.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDPSQPN-EEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 344444444444444444444444444433 3444444444444444444444444444444444444444444443332
Q ss_pred HHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCC-CCCChHHHHH--HhcCCHHHHHHHHHcCCCCCCCCCCCChH
Q 037006 354 RLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKD-LHGWTALHRA--SFKGKIEVVRMLIDKGIDVDAKDEDGYTA 430 (541)
Q Consensus 354 ~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d-~~g~t~L~~A--a~~g~~~~v~~Ll~~g~d~~~~d~~g~tp 430 (541)
+ ++++|+++|++++..+ ..|+||||+| +..|+.+++++|+++|++++..|..|.||
T Consensus 101 ~---------------------~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 159 (229)
T 2vge_A 101 V---------------------ICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA 159 (229)
T ss_dssp H---------------------HHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEE
T ss_pred H---------------------HHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHH
Confidence 2 2444445555555554 4666777777 67777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC--CcccCCCCCCHHHHHHHcCcHHHHHHHH
Q 037006 431 LHCAVESGHTDVTELLVKKGAD--VEARTSKNVSPMQIAECLHYAGISRILM 480 (541)
Q Consensus 431 L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~l~~A~~~~~~~i~~~Ll 480 (541)
++.++..+ ..++|++.|++ ++.+|..|+||||+|+..|+.++++.++
T Consensus 160 l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 160 LWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp SSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred HHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 76543333 22566777776 5667777777777777777777765533
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.1e-29 Score=223.05 Aligned_cols=157 Identities=26% Similarity=0.350 Sum_probs=118.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC
Q 037006 306 DGDTPLHITASLGYEQMVKLLLQ-KGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG 384 (541)
Q Consensus 306 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g 384 (541)
.+.|||+.|+..|+.++++.|++ .+.+++..+..|.||||+|+..|+.+ ++++|+++|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g 65 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVS---------------------VVEYLLQHG 65 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHH---------------------HHHHHHHTT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHH---------------------HHHHHHhcC
Confidence 45566666666666666666665 33455555666666666665554443 356666677
Q ss_pred CCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 037006 385 AAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPM 464 (541)
Q Consensus 385 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l 464 (541)
++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||+
T Consensus 66 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 145 (165)
T 3twr_A 66 ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145 (165)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTG
T ss_pred CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChh
Confidence 77777788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHcCcHHHHHHHHhCCC
Q 037006 465 QIAECLHYAGISRILMHGGA 484 (541)
Q Consensus 465 ~~A~~~~~~~i~~~Ll~~ga 484 (541)
++|.. ++.+++++|+++||
T Consensus 146 ~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 146 DLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp GGSCT-TCHHHHHHHHTC--
T ss_pred HhHhc-CChHHHHHHhhccc
Confidence 88766 77888888888876
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=9.9e-29 Score=221.85 Aligned_cols=167 Identities=25% Similarity=0.274 Sum_probs=122.7
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhc-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhc
Q 037006 172 QGQTLLHIAIAQRRPDIVQLLLEF-GPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRG 250 (541)
Q Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~ 250 (541)
++.++||.||..|+.++|++|++. +.+++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDH-GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 456777777777777777777776 3455555554 77777777777777777777777777777777777777777777
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 037006 251 GHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKG 330 (541)
Q Consensus 251 g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 330 (541)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+..++.+++++|++.|
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN-KYGEMPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCC-TTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhc-cCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 77777777777777777777777777777777777777777777777777766 66777777777777777777777777
Q ss_pred CCccccccCC
Q 037006 331 ANKYIRNKSG 340 (541)
Q Consensus 331 ~~~~~~~~~g 340 (541)
++++..+..+
T Consensus 162 ~~~~~~~~~~ 171 (179)
T 3f6q_A 162 QNLNRIPYKD 171 (179)
T ss_dssp CCCSCBCCCC
T ss_pred cCcccCCccc
Confidence 7776555443
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.4e-28 Score=213.27 Aligned_cols=150 Identities=28% Similarity=0.368 Sum_probs=105.4
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCH
Q 037006 174 QTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHL 253 (541)
Q Consensus 174 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~ 253 (541)
.|+||.|+..|+.++|++|++.|++++. +. .|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFTT-DW-LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCCC-CT-TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCc-CC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 4677777777777777777777776542 22 266777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 037006 254 EVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLL 326 (541)
Q Consensus 254 ~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 326 (541)
+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS-KFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHh
Confidence 77777777777777777777777777777777777777777777776665 5667777777777777776665
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2.5e-28 Score=213.95 Aligned_cols=153 Identities=28% Similarity=0.409 Sum_probs=122.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCC
Q 037006 307 GDTPLHITASLGYEQMVKLLLQK-GANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGA 385 (541)
Q Consensus 307 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~ 385 (541)
+.|||+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+. +++++|+++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~---------------------~~v~~Ll~~g~ 59 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGST---------------------AIALELLKQGA 59 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCH---------------------HHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCH---------------------HHHHHHHHCCC
Confidence 34677777777777777777776 33667777777777776 554444 34666777778
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHH
Q 037006 386 AINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQ 465 (541)
Q Consensus 386 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 465 (541)
+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.|||+
T Consensus 60 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~ 138 (156)
T 1bd8_A 60 SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLE 138 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHH
Confidence 8888888888888888888888888888888888888888888888888888888888888888 888888888888888
Q ss_pred HHHHcCcHHHHHHHHhC
Q 037006 466 IAECLHYAGISRILMHG 482 (541)
Q Consensus 466 ~A~~~~~~~i~~~Ll~~ 482 (541)
+|+..|+.+++++|+++
T Consensus 139 ~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 139 LALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHSCCHHHHHHHHTT
T ss_pred HHHHcCcHHHHHHHHhh
Confidence 88888888888888864
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.6e-28 Score=217.38 Aligned_cols=159 Identities=31% Similarity=0.372 Sum_probs=100.4
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcC-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHH
Q 037006 170 DAQGQTLLHIAIAQRRPDIVQLLLEFG-PDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLAL 248 (541)
Q Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa 248 (541)
|..|.|+||.|+..|+.++|++|++.+ .+++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGR-QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccC-CCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 445666666666666666666666533 333333333 566666666666666666666666666666666666666666
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 037006 249 RGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQ 328 (541)
Q Consensus 249 ~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 328 (541)
..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++|+. |+.+++++|++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKN-RDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCChhHhHhc-CChHHHHHHhh
Confidence 6666666666666666666666666666666666666666666666666666655 556666666554 66666666666
Q ss_pred cCC
Q 037006 329 KGA 331 (541)
Q Consensus 329 ~g~ 331 (541)
.|+
T Consensus 162 ~gA 164 (165)
T 3twr_A 162 DAA 164 (165)
T ss_dssp C--
T ss_pred ccc
Confidence 554
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.3e-29 Score=237.13 Aligned_cols=180 Identities=21% Similarity=0.190 Sum_probs=134.5
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhc
Q 037006 171 AQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRG 250 (541)
Q Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~ 250 (541)
..|.||||.|+..|+.++++.|+++|++++... .+.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~--~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP--LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccCc--hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 468999999999999999999999999998652 389999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHH--HHcCCHHHHHHHHH
Q 037006 251 GHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHIT--ASLGYEQMVKLLLQ 328 (541)
Q Consensus 251 g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~ 328 (541)
|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+...+.||||+| +..|+.+++++|++
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988855566999999 78899999999999
Q ss_pred cCCCcccc---------ccCCCchhHHHHHcCC
Q 037006 329 KGANKYIR---------NKSGKTAYDVAAECGH 352 (541)
Q Consensus 329 ~g~~~~~~---------~~~g~t~l~~A~~~g~ 352 (541)
.|++++.. +..+.++.+++...|.
T Consensus 161 ~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 161 VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99887765 5567777777766665
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=5.3e-29 Score=234.60 Aligned_cols=111 Identities=32% Similarity=0.433 Sum_probs=60.6
Q ss_pred HHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccc
Q 037006 377 MQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEAR 456 (541)
Q Consensus 377 ~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 456 (541)
+++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 53 v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 132 (239)
T 1ycs_B 53 VQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAM 132 (239)
T ss_dssp HHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccee
Confidence 33444444445555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCC-CHHHHH--HHcCcHHHHHHHHhCCCCCC
Q 037006 457 TSKNV-SPMQIA--ECLHYAGISRILMHGGATKD 487 (541)
Q Consensus 457 ~~~g~-t~l~~A--~~~~~~~i~~~Ll~~ga~~~ 487 (541)
+..|. ||||+| +..|+.+++++|+++|++.+
T Consensus 133 ~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 133 TYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp CSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred cCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 54444 555555 44455555555555555544
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.8e-27 Score=208.45 Aligned_cols=151 Identities=30% Similarity=0.350 Sum_probs=83.8
Q ss_pred ccHHHHHHHcCCHHHHHHHHhc-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCC
Q 037006 174 QTLLHIAIAQRRPDIVQLLLEF-GPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGH 252 (541)
Q Consensus 174 ~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~ 252 (541)
.|+||+|+..|+.+++++|++. +.+++..+.. |.||||+ +..|+.+++++|+++|++++..+..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~-g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTT-SCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCC-CCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 3555555555555555555555 2244444443 5555555 55555555555555555555555555555555555555
Q ss_pred HHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 037006 253 LEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQ 328 (541)
Q Consensus 253 ~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 328 (541)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|++. ++++..+ ..|.|||++|+..|+.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~-~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRD-ARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCC-TTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHh
Confidence 5555555555555555555555555555555555555555555 5555444 445555555555555555555554
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=3e-27 Score=201.96 Aligned_cols=134 Identities=22% Similarity=0.290 Sum_probs=126.9
Q ss_pred CCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHH
Q 037006 330 GANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEV 409 (541)
Q Consensus 330 g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~ 409 (541)
+++++..+..|.||||+|+..|+.+ ++++|+++|++++.+|..|+||||+|+. |+.++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~ 59 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVE---------------------TVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQV 59 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHH---------------------HHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHH---------------------HHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHH
Confidence 4678889999999999988776654 4888999999999999999999999999 99999
Q ss_pred HHHHHHcCCCCCCCCCC-CChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q 037006 410 VRMLIDKGIDVDAKDED-GYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 410 v~~Ll~~g~d~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 485 (541)
+++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..++.+++++|+++||+
T Consensus 60 v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 60 AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999985
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=2.1e-26 Score=196.64 Aligned_cols=133 Identities=25% Similarity=0.303 Sum_probs=110.2
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHH
Q 037006 297 ARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRT 376 (541)
Q Consensus 297 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~ 376 (541)
++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+. |+. ++
T Consensus 3 ~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~---------------------~~ 59 (136)
T 1d9s_A 3 PGIHMLG-GSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSA---------------------QV 59 (136)
T ss_dssp CCCSCCC-CCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCH---------------------HH
T ss_pred CCccCCC-CCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCH---------------------HH
Confidence 4555555 567777777777777777777777777777777788888777765 554 34
Q ss_pred HHHHHHcCCCCCCCCCC-CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q 037006 377 MQRLIEAGAAINGKDLH-GWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGAD 452 (541)
Q Consensus 377 ~~~Ll~~g~~~~~~d~~-g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~ 452 (541)
+++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 60 v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 60 AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 67778888888888888 89999999999999999999999999999999999999999999999999999999886
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.9e-27 Score=214.19 Aligned_cols=167 Identities=15% Similarity=0.096 Sum_probs=116.2
Q ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCH----HHHHHHHHcCCCccccccCCCchhHHHHH
Q 037006 274 NTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYE----QMVKLLLQKGANKYIRNKSGKTAYDVAAE 349 (541)
Q Consensus 274 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 349 (541)
.++|+.|+..|+.+.++.++..+.+ ..++..|+||||+|+..|+. +++++|+++|++++.+|..|+||||+|+.
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 3556666666666666666655432 22223467777777776654 47777777777777777777777777777
Q ss_pred cCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCC-hHHHHHHhcC-----CHHHHHHHHH-cCCCCCC
Q 037006 350 CGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGW-TALHRASFKG-----KIEVVRMLID-KGIDVDA 422 (541)
Q Consensus 350 ~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~-t~L~~Aa~~g-----~~~~v~~Ll~-~g~d~~~ 422 (541)
.|+.++.. ..+++++|+++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|+|++.
T Consensus 85 ~~~~~~~~---------------~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~ 149 (186)
T 3t8k_A 85 GGGNDITG---------------TTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI 149 (186)
T ss_dssp HCTTCHHH---------------HHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC
T ss_pred cCCcchhh---------------HHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc
Confidence 66544321 13567778888888888888888 8888888743 3568888888 7888888
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccC
Q 037006 423 KDEDGYTALHCAVESGHTDVTELLVKKGADVEART 457 (541)
Q Consensus 423 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 457 (541)
+|..|+||||+|++.|+.++|++|+++....+.++
T Consensus 150 ~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 150 KDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp CCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 88888888888888888888888887655555443
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=1e-26 Score=203.70 Aligned_cols=141 Identities=25% Similarity=0.304 Sum_probs=107.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcC
Q 037006 305 RDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAG 384 (541)
Q Consensus 305 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g 384 (541)
..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+ .|+ .+++++|+++|
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~---------------------~~~v~~Ll~~g 67 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGS---------------------ARVAELLLLHG 67 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTC---------------------HHHHHHHHTTT
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCC---------------------HHHHHHHHHcC
Confidence 56788888888888888888888888888888888888888763 444 45577788888
Q ss_pred CCCCCCCCCCCh-HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCH
Q 037006 385 AAINGKDLHGWT-ALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSP 463 (541)
Q Consensus 385 ~~~~~~d~~g~t-~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~ 463 (541)
++++.+|..|+| |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 68 ~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 68 AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 889989989998 9999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHH
Q 037006 464 MQIA 467 (541)
Q Consensus 464 l~~A 467 (541)
.+-+
T Consensus 148 ~~~~ 151 (156)
T 1bi7_B 148 AEGP 151 (156)
T ss_dssp ----
T ss_pred cccC
Confidence 7744
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=2.6e-27 Score=213.19 Aligned_cols=159 Identities=13% Similarity=0.110 Sum_probs=142.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCccccc-cCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCC
Q 037006 307 GDTPLHITASLGYEQMVKLLLQKGANKYIRN-KSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGA 385 (541)
Q Consensus 307 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~ 385 (541)
+.++|+.|+..|+.+.++.+++.+.+ ..+ ..|+||||+|+.+|+.+. +.+++++|+++|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~-----------------~~~iv~~Ll~~Ga 66 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEA-----------------RYKISMFLINKGA 66 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHH-----------------HHHHHHHHHHTTC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcch-----------------HHHHHHHHHHCCC
Confidence 56889999999999999999987754 445 789999999999887542 2356999999999
Q ss_pred CCCCCCCCCChHHHHHHhcCC------HHHHHHHHHcCCCCCCCCCCCC-hHHHHHHHcC-----CHHHHHHHHH-CCCC
Q 037006 386 AINGKDLHGWTALHRASFKGK------IEVVRMLIDKGIDVDAKDEDGY-TALHCAVESG-----HTDVTELLVK-KGAD 452 (541)
Q Consensus 386 ~~~~~d~~g~t~L~~Aa~~g~------~~~v~~Ll~~g~d~~~~d~~g~-tpL~~A~~~g-----~~~~v~~Ll~-~ga~ 452 (541)
++|.+|..|+||||+|+..|+ .+++++|+++|+|+|.+|..|+ ||||+|+..+ +.+++++|++ +|++
T Consensus 67 dvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad 146 (186)
T 3t8k_A 67 DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ 146 (186)
T ss_dssp CSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC
T ss_pred CCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC
Confidence 999999999999999999987 6899999999999999999999 9999999954 4579999999 9999
Q ss_pred CcccCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q 037006 453 VEARTSKNVSPMQIAECLHYAGISRILMHGGA 484 (541)
Q Consensus 453 ~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga 484 (541)
++.+|..|+||||+|+..|+.+++++|+++..
T Consensus 147 ~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 147 LLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999997644
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=4.2e-26 Score=199.74 Aligned_cols=142 Identities=28% Similarity=0.322 Sum_probs=90.2
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCch-HHHH
Q 037006 168 SADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWG-PIHL 246 (541)
Q Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t-~L~~ 246 (541)
..+..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+ .|+.+++++|+++|++++..+..|+| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSY-GRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSS-SCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 34566777777777777777777777777777776665 677777764 67777777777777777777777776 7777
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHH
Q 037006 247 ALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLH 312 (541)
Q Consensus 247 Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 312 (541)
|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||.+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~~~ 149 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN-HARIDAAE 149 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccC-cCcCcccc
Confidence 777777777777777777777777777777777777777777777777777666655 45555554
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=8.9e-25 Score=183.50 Aligned_cols=126 Identities=40% Similarity=0.660 Sum_probs=117.8
Q ss_pred CCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCC
Q 037006 339 SGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGI 418 (541)
Q Consensus 339 ~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 418 (541)
+|+||||+|+..|+. +++++|+++|++++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 1 ~g~t~L~~A~~~~~~---------------------~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 59 (126)
T 1n0r_A 1 NGRTPLHLAARNGHL---------------------EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59 (126)
T ss_dssp CCCCHHHHHHHHTCH---------------------HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcH---------------------HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Confidence 467777777665554 55888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q 037006 419 DVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 419 d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 485 (541)
+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++||+
T Consensus 60 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 60 DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.7e-24 Score=184.77 Aligned_cols=115 Identities=35% Similarity=0.502 Sum_probs=108.4
Q ss_pred HhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHH
Q 037006 369 ARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVK 448 (541)
Q Consensus 369 ~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 448 (541)
+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 22 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 101 (136)
T 2jab_A 22 ARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLK 101 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34444566888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q 037006 449 KGADVEARTSKNVSPMQIAECLHYAGISRILMHGG 483 (541)
Q Consensus 449 ~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~g 483 (541)
+|++++.+|..|+|||++|+..|+.+++++|+++|
T Consensus 102 ~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 102 HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999886
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.5e-24 Score=180.76 Aligned_cols=126 Identities=44% Similarity=0.642 Sum_probs=89.1
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcC
Q 037006 172 QGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGG 251 (541)
Q Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g 251 (541)
+|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 3667777777777777777777777777666555 667777777777777777777777777766666777777777777
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCC
Q 037006 252 HLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGAR 298 (541)
Q Consensus 252 ~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 298 (541)
+.+++++|+++|++++..|..|.|||++|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 77777777777777776666677777777777777777777766654
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.6e-24 Score=184.93 Aligned_cols=126 Identities=33% Similarity=0.423 Sum_probs=96.7
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHh
Q 037006 170 DAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALR 249 (541)
Q Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~ 249 (541)
...+.||||+||..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 455778888888888888888888888877777665 7778888777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCC
Q 037006 250 GGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANG 296 (541)
Q Consensus 250 ~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 296 (541)
.|+.+++++|+++|++++..|.+|.|||++|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 77777777777777777777777777777777777777777777764
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2.3e-25 Score=190.42 Aligned_cols=134 Identities=25% Similarity=0.408 Sum_probs=116.9
Q ss_pred CCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHH
Q 037006 330 GANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEV 409 (541)
Q Consensus 330 g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~ 409 (541)
|+|+ .+|..|.||||+|+..|+.+ ++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~---------------------~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 58 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIP---------------------SVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKV 58 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHH---------------------HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHH---------------------HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 5677 68899999999988766654 4788999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q 037006 410 VRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGAT 485 (541)
Q Consensus 410 v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~ 485 (541)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+.+..
T Consensus 59 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 59 VELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888876543
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=3.1e-25 Score=199.71 Aligned_cols=140 Identities=27% Similarity=0.328 Sum_probs=111.5
Q ss_pred CCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHc
Q 037006 238 TSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASL 317 (541)
Q Consensus 238 ~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 317 (541)
..|.||||+|+..|+.+++++|++ |++++..|..|+||||+|+..|+.+++++|+++|++++..+...|.||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 456788888888888888888888 8888888888888888888888888888888888888877767788888888888
Q ss_pred CCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChH
Q 037006 318 GYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTA 397 (541)
Q Consensus 318 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~ 397 (541)
|+.+++++|+++|++++.+|..|.||+|+|++.++ ...+.++
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~--------------------------------------~~~~~~~ 162 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILK--------------------------------------TTPKGNP 162 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH--------------------------------------TCCCCSH
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc--------------------------------------CcccccH
Confidence 88888888888888888888888888888875332 1335577
Q ss_pred HHHHHhcCCHHHHHHHHHc
Q 037006 398 LHRASFKGKIEVVRMLIDK 416 (541)
Q Consensus 398 L~~Aa~~g~~~~v~~Ll~~ 416 (541)
|++|+..|+.+++++|.++
T Consensus 163 l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 163 MQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCHHHHHHHHHHh
Confidence 7777777777777777654
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1.6e-23 Score=188.42 Aligned_cols=139 Identities=24% Similarity=0.277 Sum_probs=110.6
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCchHHHHHHh
Q 037006 171 AQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSE-TSTWGPIHLALR 249 (541)
Q Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~L~~Aa~ 249 (541)
..|.||||+|+..|+.+++++|++ |++++..+.. |.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 456788888888888888888888 7777777765 7888888888888888888888888887777 778888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 037006 250 GGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQK 329 (541)
Q Consensus 250 ~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 329 (541)
.|+.+++++|+++|++++..|..|.||||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 8888888888888888888888888888888764432 3467888888888888888888754
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=2.2e-23 Score=174.42 Aligned_cols=116 Identities=24% Similarity=0.373 Sum_probs=101.0
Q ss_pred ccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHc
Q 037006 337 NKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDK 416 (541)
Q Consensus 337 ~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~ 416 (541)
+..|.||||+|+..|+ .+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 4 ~~~~~~~l~~A~~~~~---------------------~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 62 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGD---------------------LDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK 62 (123)
T ss_dssp ---CHHHHHHHHHTTC---------------------HHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTT
T ss_pred ccccchHHHHHHHcCC---------------------HHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 3456677776666555 4558889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcH
Q 037006 417 GIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYA 473 (541)
Q Consensus 417 g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 473 (541)
|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||+++|...+..
T Consensus 63 g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 63 GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHH
T ss_pred CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHH
Confidence 999999999999999999999999999999999999999999999999999443333
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=2.5e-23 Score=196.21 Aligned_cols=140 Identities=27% Similarity=0.317 Sum_probs=110.5
Q ss_pred CCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcC
Q 037006 239 STWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLG 318 (541)
Q Consensus 239 ~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g 318 (541)
.|.||||+|+..|+.+++++|++ |++++..|..|+||||+|+..|+.+++++|+++|++++..+...|.||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 46778888888888888888888 88888888888888888888888888888888888888777667888888888888
Q ss_pred CHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHH
Q 037006 319 YEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTAL 398 (541)
Q Consensus 319 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L 398 (541)
+.+++++|+++|++++..|..|.||||+|+..++ ...+.|||
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~--------------------------------------~~~~~~~l 164 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILK--------------------------------------TTPKGNPM 164 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT--------------------------------------TCCCSSHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh--------------------------------------ccCCCCHH
Confidence 8888888888888888888888888888764211 23456777
Q ss_pred HHHHhcCCHHHHHHHHHcC
Q 037006 399 HRASFKGKIEVVRMLIDKG 417 (541)
Q Consensus 399 ~~Aa~~g~~~~v~~Ll~~g 417 (541)
|+|+..|+.+++++|++++
T Consensus 165 ~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 165 QFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHhc
Confidence 7777777777777777653
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=2.6e-23 Score=196.06 Aligned_cols=142 Identities=23% Similarity=0.260 Sum_probs=120.7
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCchHHHHHHh
Q 037006 171 AQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSE-TSTWGPIHLALR 249 (541)
Q Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~L~~Aa~ 249 (541)
..|.||||+||..|+.++|++|++ |++++..+.. |.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 457788888888888888888888 8888887776 8889999988889999999998888888877 778899999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 037006 250 GGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQK 329 (541)
Q Consensus 250 ~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 329 (541)
.|+.+++++|+++|++++..|..|.||||+|+..++. ..+.|||++|+..|+.+++++|++.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~------------------~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT------------------CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc------------------cCCCCHHHHHHHcChHHHHHHHHHh
Confidence 9999999999999999999999999999999863221 4578999999999999999999986
Q ss_pred CCC
Q 037006 330 GAN 332 (541)
Q Consensus 330 g~~ 332 (541)
+.+
T Consensus 183 ~~~ 185 (244)
T 3ui2_A 183 VFE 185 (244)
T ss_dssp HEE
T ss_pred ccc
Confidence 544
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=2.6e-23 Score=177.64 Aligned_cols=123 Identities=27% Similarity=0.300 Sum_probs=69.7
Q ss_pred CCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHH
Q 037006 235 RSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHIT 314 (541)
Q Consensus 235 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 314 (541)
.++..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A 83 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTG-YQNDSPLHDA 83 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-GGGCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcC-CCCCCHHHHH
Confidence 344555555555555555555555555555555555555555555555555555555555555555544 4455555555
Q ss_pred HHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHH
Q 037006 315 ASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDA 358 (541)
Q Consensus 315 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~ 358 (541)
+..|+.+++++|+++|++++..|..|.||+++|+..+..+++.+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 55555555555555555555555566666655555554444433
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.3e-23 Score=195.20 Aligned_cols=135 Identities=25% Similarity=0.326 Sum_probs=113.1
Q ss_pred cccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHH
Q 037006 336 RNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLID 415 (541)
Q Consensus 336 ~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~ 415 (541)
.+..|.||||+|+..|+. +++++|++.|++++.+|..|+||||+|+..|+.++|++|++
T Consensus 69 ~~~~g~t~L~~A~~~g~~---------------------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 127 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNL---------------------SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFT 127 (222)
T ss_dssp HEEEESCHHHHHHHHTCH---------------------HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTT
T ss_pred cccccccccccccccCcH---------------------HHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHc
Confidence 456778888877766655 55888999999999999999999999999999999999999
Q ss_pred c-CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCCcc
Q 037006 416 K-GIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGIQQ 491 (541)
Q Consensus 416 ~-g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~~~ 491 (541)
. |++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..+..++++.|++.|+.....+.
T Consensus 128 ~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 128 QPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp STTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred CCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999998654443
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=3.1e-23 Score=201.50 Aligned_cols=141 Identities=19% Similarity=0.221 Sum_probs=110.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCccc------cccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHH
Q 037006 309 TPLHITASLGYEQMVKLLLQKGANKYI------RNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIE 382 (541)
Q Consensus 309 t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~ 382 (541)
++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+..++ .++.+++++|++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~------------------~~~~~iv~~Ll~ 214 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVAN------------------QASLPLVDFIIQ 214 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCC------------------TTTHHHHHHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcc------------------cCcHHHHHHHHh
Confidence 455566666666666666666665554 46777888887776532 245577999999
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCC
Q 037006 383 AGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVS 462 (541)
Q Consensus 383 ~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 462 (541)
+|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.|
T Consensus 215 ~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~t 288 (301)
T 2b0o_E 215 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAF 288 (301)
T ss_dssp HSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSS
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999886 5789
Q ss_pred HHHHHHHcCcH
Q 037006 463 PMQIAECLHYA 473 (541)
Q Consensus 463 ~l~~A~~~~~~ 473 (541)
|||+|+.+|+.
T Consensus 289 pLh~A~~~g~~ 299 (301)
T 2b0o_E 289 PLHVDYSWVIS 299 (301)
T ss_dssp CCC--------
T ss_pred hhHHHHhcCCc
Confidence 99999998864
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=6.7e-22 Score=189.85 Aligned_cols=122 Identities=21% Similarity=0.332 Sum_probs=112.4
Q ss_pred hHHHHhhCCHHHHHHHHHcCCCC------CCCCCCCChHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 037006 365 LCVAARKGEVRTMQRLIEAGAAI------NGKDLHGWTALHRASFK---GKIEVVRMLIDKGIDVDAKDEDGYTALHCAV 435 (541)
Q Consensus 365 l~~a~~~~~~~~~~~Ll~~g~~~------~~~d~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 435 (541)
+..|+..|+.+.++.+++.|+++ +..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+
T Consensus 134 l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~ 213 (278)
T 1dcq_A 134 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC 213 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHH
T ss_pred hhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHH
Confidence 55666777777788888988884 44578899999999999 8999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q 037006 436 ESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATK 486 (541)
Q Consensus 436 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~ 486 (541)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 214 ~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 214 LTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999864
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1e-22 Score=170.39 Aligned_cols=112 Identities=28% Similarity=0.320 Sum_probs=79.6
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHh
Q 037006 170 DAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALR 249 (541)
Q Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~ 249 (541)
+..|.||||+|+..|+.++|++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTT-SSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 456677777777777777777777777777766655 6777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q 037006 250 GGHLEVLKLLLIKGANVNALTKDGNTALHLAVE 282 (541)
Q Consensus 250 ~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~ 282 (541)
.|+.+++++|+++|++++..|..|.|||++|..
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 777777777777777777777777777777643
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.6e-22 Score=158.87 Aligned_cols=93 Identities=39% Similarity=0.660 Sum_probs=89.5
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCc
Q 037006 393 HGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHY 472 (541)
Q Consensus 393 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 472 (541)
+|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC
Q 037006 473 AGISRILMHGGAT 485 (541)
Q Consensus 473 ~~i~~~Ll~~ga~ 485 (541)
.+++++|+++||+
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=6.5e-23 Score=190.57 Aligned_cols=133 Identities=24% Similarity=0.297 Sum_probs=82.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHc-CC
Q 037006 307 GDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEA-GA 385 (541)
Q Consensus 307 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~-g~ 385 (541)
|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+ ++++|+++ |+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~---------------------~v~~Ll~~~g~ 131 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKD---------------------IVEMLFTQPNI 131 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH---------------------HHHHHTTSTTC
T ss_pred cccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHH---------------------HHHHHHcCCCC
Confidence 445555555555555555555555555555555555555554444433 24445555 66
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCC
Q 037006 386 AINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKN 460 (541)
Q Consensus 386 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 460 (541)
+++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|++.|+..+..+..|
T Consensus 132 ~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 132 ELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp CCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 777778888888999999999999999999999999999999999999999999999999999988887766554
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=195.38 Aligned_cols=140 Identities=26% Similarity=0.264 Sum_probs=124.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCchHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCChHH
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKASTER------SETSTWGPIHLALRG---GHLEVLKLLLIKGANVNALTKDGNTAL 277 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~------~~~~~~t~L~~Aa~~---g~~~iv~~Ll~~g~~~~~~d~~g~t~L 277 (541)
..++|+.|+..|+.+.++.|++.|++++. .+..|+||||+|+.. |+.+++++|+++|++++..|.+|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45789999999999999999999999987 688999999999997 899999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCchhHHHHHcCCH
Q 037006 278 HLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLLQKGANKYIRNKSGKTAYDVAAECGHS 353 (541)
Q Consensus 278 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~ 353 (541)
|+|+..|+.+++++|+++|++++..+ ..|.|||++|+..|+.+++++|++.|++ .|.||||+|+..|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVN-EAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999999888 7899999999999999999999999876 589999999998874
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=9.8e-22 Score=188.72 Aligned_cols=128 Identities=17% Similarity=0.191 Sum_probs=112.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCc------cccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHH
Q 037006 308 DTPLHITASLGYEQMVKLLLQKGANK------YIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLI 381 (541)
Q Consensus 308 ~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll 381 (541)
.++|+.|+..|+.+.+..+++.|+++ +..+..|.||||+|+..|+ .|+.+++++|+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~------------------~~~~~~v~~Ll 192 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVD------------------RTSLHIVDFLV 192 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCC------------------TTTHHHHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcc------------------cchHHHHHHHH
Confidence 46788888888888888888888874 3447889999999987632 14456689999
Q ss_pred HcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Q 037006 382 EAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADV 453 (541)
Q Consensus 382 ~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~ 453 (541)
++|+++|.+|..|+||||+|+..|+.++|++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 193 ~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 193 QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999863
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=1.9e-21 Score=202.75 Aligned_cols=125 Identities=24% Similarity=0.255 Sum_probs=114.2
Q ss_pred hHHHHhhCCHHHHHHHHHcCCCCCCC------CCCCChHHHHHHh---cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q 037006 365 LCVAARKGEVRTMQRLIEAGAAINGK------DLHGWTALHRASF---KGKIEVVRMLIDKGIDVDAKDEDGYTALHCAV 435 (541)
Q Consensus 365 l~~a~~~~~~~~~~~Ll~~g~~~~~~------d~~g~t~L~~Aa~---~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 435 (541)
++.|+..|+.++++.|++.|+++|.. +..|+||||+|+. .|+.++|++|+++|+|+|.+|..|+||||+|+
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~ 215 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAA 215 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHT
T ss_pred HHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 55667777778899999999999987 8899999999966 89999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q 037006 436 ESGHTDVTELLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMHGGATKDGI 489 (541)
Q Consensus 436 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ga~~~~~ 489 (541)
..|+.+++++|+++||+++.+|..|+||||+|+..|+.+++++|+++|++.+..
T Consensus 216 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 216 LYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp TTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999997753
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=3.2e-21 Score=201.03 Aligned_cols=137 Identities=21% Similarity=0.238 Sum_probs=106.3
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccc------ccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHH
Q 037006 309 TPLHITASLGYEQMVKLLLQKGANKYIR------NKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIE 382 (541)
Q Consensus 309 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~ 382 (541)
+.|+.|+..|+.++++.|++.|++++.. +..|.||||+|+.. +..|+.+++++|++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~------------------a~~g~~~~v~~Ll~ 195 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKV------------------ANQASLPLVDFIIQ 195 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHT------------------CCTTTHHHHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHh------------------cccccHHHHHHHHH
Confidence 4566666666666666666666665554 77888888888651 22455677999999
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCC
Q 037006 383 AGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVS 462 (541)
Q Consensus 383 ~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 462 (541)
+|+++|.+|..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+..|+.+++++|+++|++++. +
T Consensus 196 ~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~ 269 (497)
T 3lvq_E 196 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------F 269 (497)
T ss_dssp HSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------
T ss_pred cCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHH
Q 037006 463 PMQIAEC 469 (541)
Q Consensus 463 ~l~~A~~ 469 (541)
|+|.+..
T Consensus 270 ~~h~~~~ 276 (497)
T 3lvq_E 270 PLHVDYS 276 (497)
T ss_dssp -------
T ss_pred cceeecc
Confidence 6666544
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=3.5e-21 Score=191.30 Aligned_cols=144 Identities=21% Similarity=0.273 Sum_probs=92.8
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHHcCCCccccc--cCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHH
Q 037006 306 DGDTPLHITASL-GYEQMVKLLLQKGANKYIRN--KSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIE 382 (541)
Q Consensus 306 ~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~--~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~ 382 (541)
.+.|+||.|+.. |+.+++++|++.|++++..+ ..|.||||+|+..|+. +++++|++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~---------------------~iv~~LL~ 256 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSL---------------------LACEFLLQ 256 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCH---------------------HHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCH---------------------HHHHHHHH
Confidence 345677777777 77777777777777777666 6677777766655444 33666777
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCC---CCCcccCCC
Q 037006 383 AGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKG---ADVEARTSK 459 (541)
Q Consensus 383 ~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g---a~~~~~~~~ 459 (541)
+|+++|..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.| ++....+..
T Consensus 257 ~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~ 336 (368)
T 3jue_A 257 NGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAG 336 (368)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCC
Confidence 77777777778888888888888888888888888888888888888888888888888888888765 333344556
Q ss_pred CCCHHHHHHHc
Q 037006 460 NVSPMQIAECL 470 (541)
Q Consensus 460 g~t~l~~A~~~ 470 (541)
+.|+++++...
T Consensus 337 ~~t~l~i~~~~ 347 (368)
T 3jue_A 337 DETYLDIFRDF 347 (368)
T ss_dssp -----------
T ss_pred CCCHHHHHHHH
Confidence 67777766544
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=5.7e-21 Score=189.75 Aligned_cols=146 Identities=27% Similarity=0.321 Sum_probs=102.4
Q ss_pred CCCccHHHHHHHc-CCHHHHHHHHhcCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHH
Q 037006 171 AQGQTLLHIAIAQ-RRPDIVQLLLEFGPDVESQGR-CGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLAL 248 (541)
Q Consensus 171 ~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa 248 (541)
..+.|+||+|+.. |+.++|++|++.|++++..+. ..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3456788888888 888888888888888887762 33788888888888888888888888888888888888888888
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCc--cCCCCCCcHHHHHHH
Q 037006 249 RGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDI--RNARDGDTPLHITAS 316 (541)
Q Consensus 249 ~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~~g~t~L~~A~~ 316 (541)
..|+.+++++|+++|++++..|.+|.||||+|+..|+.+++++|++.+..... .....+.|+++++..
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 88888888888888888888888888888888888888888888876533221 111345566655444
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=4.8e-21 Score=158.08 Aligned_cols=108 Identities=34% Similarity=0.485 Sum_probs=99.8
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 037006 389 GKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQIAE 468 (541)
Q Consensus 389 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 468 (541)
.+|.+|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhCCCCCCCCcccccch
Q 037006 469 CLHYAGISRILMHGGATKDGIQQTNLRQ 496 (541)
Q Consensus 469 ~~~~~~i~~~Ll~~ga~~~~~~~~~~~~ 496 (541)
..++.+++++|+++|++++.....+.++
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 9999999999999999987665555443
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=5.8e-20 Score=145.25 Aligned_cols=91 Identities=46% Similarity=0.659 Sum_probs=47.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCH
Q 037006 207 CSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHLALRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRR 286 (541)
Q Consensus 207 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 286 (541)
|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHCCC
Q 037006 287 DCARLLLANGA 297 (541)
Q Consensus 287 ~~v~~Ll~~g~ 297 (541)
+++++|+++|+
T Consensus 82 ~~~~~Ll~~ga 92 (93)
T 1n0q_A 82 EVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 55555555544
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.1e-20 Score=155.88 Aligned_cols=109 Identities=38% Similarity=0.586 Sum_probs=99.3
Q ss_pred ccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q 037006 335 IRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLI 414 (541)
Q Consensus 335 ~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll 414 (541)
.+|..|+||||+|+..|+.+ ++++|+++|++++..|..|+||||+|+..|+.+++++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~---------------------~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll 62 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAE---------------------EVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHH---------------------HHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHcCCHH---------------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 46788999999888766654 578889999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHH
Q 037006 415 DKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPM 464 (541)
Q Consensus 415 ~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l 464 (541)
++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.+|-
T Consensus 63 ~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 63 AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999999999999999999999999874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=7.4e-19 Score=143.57 Aligned_cols=93 Identities=32% Similarity=0.402 Sum_probs=86.6
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 037006 387 INGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELLVKKGADVEARTSKNVSPMQI 466 (541)
Q Consensus 387 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 466 (541)
+...+.+|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34467889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHH
Q 037006 467 AECLHYAGISRIL 479 (541)
Q Consensus 467 A~~~~~~~i~~~L 479 (541)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=7.5e-17 Score=131.54 Aligned_cols=92 Identities=24% Similarity=0.316 Sum_probs=68.3
Q ss_pred CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCchHHHH
Q 037006 167 DSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAGEALIVELLLARKASTERSETSTWGPIHL 246 (541)
Q Consensus 167 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~L~~ 246 (541)
...|.+|.|+||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..|+||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~-g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN-GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 445677888888888888888888888888887777655 7777777777777777777777777777777777777777
Q ss_pred HHhcCCHHHHHHH
Q 037006 247 ALRGGHLEVLKLL 259 (541)
Q Consensus 247 Aa~~g~~~iv~~L 259 (541)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 7777777777765
No 115
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=1.1e-13 Score=117.51 Aligned_cols=122 Identities=23% Similarity=0.441 Sum_probs=94.4
Q ss_pred CCcccccCCCCeEEEEecCCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeecCCCCCCCC
Q 037006 1 MDRLVSLEPSNLVAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYHLPPGSVLP 80 (541)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~p 80 (541)
++++|+++|.+++.|.++.+++|++.|+|+|.+.. +|||||+||+|.||.|+|+.|+|.|.++..+.+. +++....|
T Consensus 11 ~~~~L~i~P~~~L~F~~p~~~~~~~~l~L~N~s~~-~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~v~V~--l~~~~~~p 87 (147)
T 2cri_A 11 HEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDR-KVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM--LQPFDYDP 87 (147)
T ss_dssp CCCCSEEESSSEEEEECCSSSCCCEEEEEECCSSS-CEEEEEEESCTTSEEEESSEEECCTTCEEEEEEE--ECCCCCCT
T ss_pred CCCeEEECCCCeEEEeCCCCceEEEEEEEECCCCC-cEEEEEECCCCccEEEcCCCcEECCCCeEEEEEE--ECCCcCCc
Confidence 57899999988999999999999999999998875 8999999999999999999999999999999998 45443333
Q ss_pred CCCCCCCcceeeeecccCCCCCCCCCCCCCCCCCccccccchhhhhhcCCceeecC
Q 037006 81 DSFPHCDDSFLLHSVVVPGAGIKDATSTLDSVPSDWFTTRKKQVFIDSGIKIMFVG 136 (541)
Q Consensus 81 ~s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 136 (541)
. ..+.|.|++.++.++... ..+...|. ....+.+.++.+++.|..
T Consensus 88 ~--~~~kDKFlVqs~~~~~~~--------~d~~~~wk-~~~~~~i~e~kLrv~f~~ 132 (147)
T 2cri_A 88 N--EKSKHKFMVQTIFAPPNI--------SDMEAVWK-EAKPDELMDSKLRCVFEM 132 (147)
T ss_dssp T--CCSCCCEEEEEEECCTTC--------CCHHHHHH-HSCTTTCEEEEEEEEEEC
T ss_pred c--ccCCCEEEEEEEEcCCCc--------ccHHHHhh-cCCCCceEEEEEEEEEec
Confidence 2 367899999998887522 12333343 333344456666776643
No 116
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=99.46 E-value=1.8e-13 Score=113.49 Aligned_cols=93 Identities=24% Similarity=0.489 Sum_probs=81.2
Q ss_pred CcccccCCCCeEEEEecCCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeecCCCCCCCCC
Q 037006 2 DRLVSLEPSNLVAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYHLPPGSVLPD 81 (541)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~p~ 81 (541)
+++|+++|.+++.|.++.++++++.|+|+|.+.. +|||||+||+|.+|.|+|+.|+|.|.++..+.+. +++....|.
T Consensus 8 ~~~L~i~P~~~l~F~~p~~~~~~~~l~L~N~s~~-~vaFKVKTT~p~~y~VrP~~G~i~P~~s~~v~V~--~~~~~~~p~ 84 (128)
T 1z9l_A 8 EQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDR-KVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM--LQPFDYDPN 84 (128)
T ss_dssp CCCSEEESSSEEEEESCCSSCEEEEEEEECCSSS-CEEEEEEESCGGGEEEESCEEEECTTCEEEEEEE--ECCCCCCTT
T ss_pred CCeEEECCCCeEEEcCCCCceEEEEEEEECCCCC-eEEEEEECCCCCceEEeCCCcEECCCCeEEEEEE--ECcCcCCcc
Confidence 6799999988999999999999999999998875 8999999999999999999999999999999998 454433332
Q ss_pred CCCCCCcceeeeecccCC
Q 037006 82 SFPHCDDSFLLHSVVVPG 99 (541)
Q Consensus 82 s~~~~~~~~l~~~~~~~~ 99 (541)
..+.|.|++.++.++.
T Consensus 85 --~~~~dkF~V~s~~~~~ 100 (128)
T 1z9l_A 85 --EKSKHKFMVQTIFAPP 100 (128)
T ss_dssp --CCCCCEEEEEEEECCT
T ss_pred --cccCCEEEEEEEECCC
Confidence 2678999999988775
No 117
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=99.44 E-value=1.6e-13 Score=116.63 Aligned_cols=89 Identities=21% Similarity=0.344 Sum_probs=79.5
Q ss_pred CcccccCCCCeEEEEecCCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeecCCCCCCCCC
Q 037006 2 DRLVSLEPSNLVAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYHLPPGSVLPD 81 (541)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~p~ 81 (541)
+++|+++|.++|.|.++.++.|++.|+|+|.+.. +|||||+||+|.+|.|+|+.|+|.|..+..+++. |+++.+
T Consensus 16 ~~~L~i~P~~~L~F~~~~~~~~~~~l~L~N~s~~-~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~V~V~--lq~~~~--- 89 (152)
T 1wic_A 16 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKN-IVAFKVRTTAPEKYRVKPSNSSCDPGASIDIIVS--PHGGLT--- 89 (152)
T ss_dssp CSSBCBBSSSCBCCCCSSSSCCCEEEEEEBCSSS-CEEEEEEESCTTTEEEESSEEEECTTCEEEEEEE--ECSSSC---
T ss_pred CCeEEECCCCeEEEeCCCCceEEEEEEEEcCCCC-eEEEEEECCCCCceeecCCCcEECCCCeEEEEEE--ecCccc---
Confidence 6899999977999999999999999999998875 8999999999999999999999999999999999 444432
Q ss_pred CCCCCCcceeeeecccC
Q 037006 82 SFPHCDDSFLLHSVVVP 98 (541)
Q Consensus 82 s~~~~~~~~l~~~~~~~ 98 (541)
..+.|.|++.++.++
T Consensus 90 --~~~kDKFlVqs~~v~ 104 (152)
T 1wic_A 90 --VSAQDRFLIMAAEME 104 (152)
T ss_dssp --CCSSCCEEEEEEECC
T ss_pred --CCCCCEEEEEEEEcC
Confidence 267899999998776
No 118
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=99.32 E-value=4e-12 Score=104.49 Aligned_cols=106 Identities=15% Similarity=0.317 Sum_probs=86.6
Q ss_pred cccccCCCCeEEEEecCCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeecCCCCCCCCCC
Q 037006 3 RLVSLEPSNLVAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYHLPPGSVLPDS 82 (541)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~p~s 82 (541)
..|+++|.++++|.++.++..++.|+|+|.+.. +|||||+||+|.||.|+|+.|+|.|..+..+.+. +++....|+.
T Consensus 7 ~~l~i~P~~~l~F~~p~~~~~~~~l~l~N~s~~-~vaFKVKTT~p~~y~VrP~~Gii~P~~s~~v~V~--~q~~~~~~~~ 83 (126)
T 1msp_A 7 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGR-RIGWAIKTTNMRRLSVDPPCGVLDPKEKVLMAVS--CDTFNAATED 83 (126)
T ss_dssp CCEEEESSSCEEEESCCSSCCCEEEEEEECSSS-CEEEEEEESCTTTEEEESCEEEECTTCEEEEEEE--ECCCCGGGSC
T ss_pred CeEEEcCCCeEEEcCcCCcceEEEEEEECCCCC-eEEEEEEcCCCCcEEEECCCeEECCCCEEEEEEE--ecCCCCCCCc
Confidence 368899988999999999999999999998876 8999999999999999999999999999999988 5554443432
Q ss_pred CCCCCcceeeeecccCCCCCCCCCCCCCCCCCcccccc
Q 037006 83 FPHCDDSFLLHSVVVPGAGIKDATSTLDSVPSDWFTTR 120 (541)
Q Consensus 83 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (541)
. ..|.|++.++.++.... ..+...||...
T Consensus 84 ~--~kDKf~Vq~~~~p~~~~-------~~~~~~wf~~d 112 (126)
T 1msp_A 84 L--NNDRITIEWTNTPDGAA-------KQFRREWFQGD 112 (126)
T ss_dssp C--SSCEEEEEEEECCTTCC-------SSCCTHHHHSS
T ss_pred c--CCCEEEEEEEECCCCcc-------hhhhHHhhcCC
Confidence 2 38899999988874431 34667788654
No 119
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=99.08 E-value=1.8e-10 Score=91.28 Aligned_cols=82 Identities=21% Similarity=0.376 Sum_probs=69.0
Q ss_pred cccCCCCeEEEEecCCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeecCCCCCCCCCCCC
Q 037006 5 VSLEPSNLVAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYHLPPGSVLPDSFP 84 (541)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~p~s~~ 84 (541)
|+++| .|+.|.++.| +++++|+|.+.. +|||||++|++.+|+|+|..|+|.|..+..+.+.+ +++ +
T Consensus 3 L~i~P-~~l~F~~~~~---~~~l~L~N~t~~-~vaFKVKtT~p~~y~VrP~~G~I~P~~~~~i~I~~--q~~-------~ 68 (109)
T 1row_A 3 LTADP-PACTVPAAGV---SSTHKLVNGGAE-KIVFKIKSSNNNEYRIAPVFGFVDPSGSKDVVITR--TAG-------A 68 (109)
T ss_dssp CEEES-SSEEEETTCE---EEEEEEEECSSS-CEEEEEEESCSSSEEEECSEEEECTTEEEEEEEEE--CSC-------C
T ss_pred EEEEC-CEeEEeCCCC---eEEEEEEcCCCC-eEEEEEEeCCCCceEEcCCceEECCCCeEEEEEEe--CCC-------C
Confidence 68999 6688888733 489999998886 89999999999999999999999999999999884 332 2
Q ss_pred CCCcceeeeecccCCC
Q 037006 85 HCDDSFLLHSVVVPGA 100 (541)
Q Consensus 85 ~~~~~~l~~~~~~~~~ 100 (541)
.+.|.|++.++..++.
T Consensus 69 ~~~dKflvq~~~~~~~ 84 (109)
T 1row_A 69 PKEDKLVVHFASAPAD 84 (109)
T ss_dssp CEEEEEEEEEEECCTT
T ss_pred CCCCEEEEEEEECCCC
Confidence 4688999998877644
No 120
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=99.05 E-value=3e-10 Score=90.30 Aligned_cols=83 Identities=19% Similarity=0.452 Sum_probs=70.5
Q ss_pred ccccCCCCeEEEEecCCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeecCCCCCCCCCCC
Q 037006 4 LVSLEPSNLVAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYHLPPGSVLPDSF 83 (541)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~p~s~ 83 (541)
.+.++| .++.|.++.| +++++|+|.+.. +|||||++|++.+|+|+|..|+|.|..+..+++.+ +++
T Consensus 10 ~~~~~p-~~l~F~~~gg---~~~l~L~N~t~~-~vAFKVKtT~p~~YrVrP~~G~I~Pg~~~~I~I~~--q~~------- 75 (116)
T 1m1s_A 10 MINVDP-PTGNYPATGG---NSTHNITSESDS-RLAFKVKSSNNEHYRVRPVYGFVDAKGKSKLDINR--LPG------- 75 (116)
T ss_dssp SEEEES-SEEEECTTCE---EEEEEEEECSSS-EEEEEEEESCTTTEEEECSEEEECTTCEEEEEEEE--CSC-------
T ss_pred eeecCC-CeEEEecCCC---EEEEEEECCCCC-eEEEEEEecCCCceEEcCCceEECCCCeEEEEEEe--CCC-------
Confidence 467788 8999999943 589999998886 89999999999999999999999999999999884 443
Q ss_pred CCCCcceeeeecccCCC
Q 037006 84 PHCDDSFLLHSVVVPGA 100 (541)
Q Consensus 84 ~~~~~~~l~~~~~~~~~ 100 (541)
+.+.|.|++.++.++..
T Consensus 76 ~~k~DKflVq~~~~~~d 92 (116)
T 1m1s_A 76 PPKEDKIVIQYAEVPAE 92 (116)
T ss_dssp CSCEEEEEEEEEEECTT
T ss_pred CCCCCEEEEEEEECCCC
Confidence 24588999998877643
No 121
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=89.17 E-value=1.1 Score=36.77 Aligned_cols=66 Identities=17% Similarity=0.283 Sum_probs=49.0
Q ss_pred ccCCCCeEEEE-ecCCCcccceEEEeecccccceeEEEeec------CCcceeecCCCccccCCccceeeeeecC
Q 037006 6 SLEPSNLVAIR-IEPGQKCSGELTLRNVMHTMPVAFRIQPT------NKARYTVKPQSGIISPLATLSVEIAYHL 73 (541)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~p~~~~~~p~~~~~~~~~~~~ 73 (541)
.+++ ++|-|- ...++..+-+|+|+|-.. .|.-|+..+. .+.-+++.|..|.|.|..+..+++...+
T Consensus 28 ~v~~-~~ldFG~v~~~~~~~~~l~I~Ntg~-vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 28 ELSR-REFVFENVKFRQLQKEKFQISNNGQ-VPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp EESC-CEEEEEEECBTCCEEEEEEEEECSS-SCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred Eeee-eeEEeeeceeeeeeeeEEEEEcCCc-cceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 4444 444432 345677788999999554 5999999874 2344889999999999999999988654
No 122
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.57 E-value=0.81 Score=36.57 Aligned_cols=51 Identities=16% Similarity=0.352 Sum_probs=43.7
Q ss_pred CCCcccceEEEeecccccceeEEEeecCCcceeecCCCccccCCccceeeeeec
Q 037006 19 PGQKCSGELTLRNVMHTMPVAFRIQPTNKARYTVKPQSGIISPLATLSVEIAYH 72 (541)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~ 72 (541)
.|++-..+|.|+|... .++-|+.++.. -|++.|.+|.+.|..+..+++.++
T Consensus 39 v~~~~~~~~~l~N~g~-~~~~f~~~~~~--~F~i~P~~g~L~pg~~~~i~V~F~ 89 (122)
T 2ys4_A 39 VKYSTQKILLVRNIGN-KNAVFHIKTCR--PFSIEPAIGTLNVGESMQLEVEFE 89 (122)
T ss_dssp SSSCEEEEEEEECCSS-SCEEEEEECCT--TEEEESSEEEECTTCEEEEEEEEC
T ss_pred cCCeEEEEEEEEECCC-CCEEEEEecCC--CeEEECCcCEECCCCEEEEEEEEE
Confidence 4777788999999555 69999999865 599999999999999999999853
No 123
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=84.52 E-value=2.1 Score=41.55 Aligned_cols=68 Identities=15% Similarity=0.263 Sum_probs=52.7
Q ss_pred cccCCCCeEEE-EecCCCcccceEEEeecccccceeEEEeecCCcc------eeecCCCccccCCccceeeeeecCC
Q 037006 5 VSLEPSNLVAI-RIEPGQKCSGELTLRNVMHTMPVAFRIQPTNKAR------YTVKPQSGIISPLATLSVEIAYHLP 74 (541)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~p~~~~~~p~~~~~~~~~~~~~ 74 (541)
|.+++ ++|.| .+..+++.+-+|+|+|-.+. |.-|+..+..... ++++|..|.+.|..+..+++.....
T Consensus 30 v~v~~-~~idFg~v~~~~~~~~~l~i~N~g~~-pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 30 LELSR-REFVFENVKFRQLQKEKFQISNNGQV-PCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVS 104 (366)
T ss_dssp EEESC-SEEEEEEECBTCCEEEEEEEEECSSS-CEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBC
T ss_pred EEEec-CeEEeeeeeeCCeEEEEEEEEecCCc-eEEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEEC
Confidence 45665 66655 35778999999999996555 9999998753221 6799999999999999999886543
No 124
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.99 E-value=2.3 Score=33.07 Aligned_cols=54 Identities=24% Similarity=0.424 Sum_probs=44.0
Q ss_pred cCCCcccceEEEeecccccceeEEEeecCC---cceeecCCCccccCCccceeeeeec
Q 037006 18 EPGQKCSGELTLRNVMHTMPVAFRIQPTNK---ARYTVKPQSGIISPLATLSVEIAYH 72 (541)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~p~~~~~~~~~~~ 72 (541)
..|+.-..+|+|+|... .|.-|+..+... .-|++.|..|.|.|..+..+++.|.
T Consensus 23 ~~g~~~~~~~~l~N~g~-~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~ 79 (112)
T 2e6j_A 23 FTGSAHCYEAILYNKGS-IDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFS 79 (112)
T ss_dssp ESSCCEEEEEEEEECCS-SCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEEC
T ss_pred EECCEEEEEEEEEECCc-ceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEE
Confidence 34777677999999666 599999976432 4599999999999999999999863
No 125
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=60.87 E-value=31 Score=29.23 Aligned_cols=128 Identities=10% Similarity=0.091 Sum_probs=70.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCcccCCCCCCcHHHHHHHcC
Q 037006 139 VLVLLVKDGEMDDLREVLERSDPAWNPADSADAQGQTLLHIAIAQRRPDIVQLLLEFGPDVESQGRCGCSTPLEAAAAAG 218 (541)
Q Consensus 139 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~t~L~~A~~~g 218 (541)
=+..|+..|+++....+.+.... .......=..|...|++++++....+--|+. ..+.+....|
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l~~--------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~--------~L~~Ly~~tg 74 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKLND--------SITWERLIQEALAQGNASLAEMIYQTQHSFD--------KLSFLYLVTG 74 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHCC--------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH--------HHHHHHHHHT
T ss_pred HHHHHHhcCCHHHHHHHHHHhCC--------HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH--------HHHHHHHHhC
Confidence 35678888888887777654321 1123344466777788888888777655432 3344445556
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCchHHHHHHhcCCHH-HHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHH
Q 037006 219 EALIVELLLARKASTERSETSTWGPIHLALRGGHLE-VLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLA 294 (541)
Q Consensus 219 ~~~iv~~Ll~~g~~~~~~~~~~~t~L~~Aa~~g~~~-iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 294 (541)
+.+-++.+.+.- ....+-..+++.+...|+++ .+++|++.|-- .-+...|-.+|..++.+.+++
T Consensus 75 ~~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~--------~eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 75 DVNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSL--------PLAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp CHHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH--------HHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh--------HHHHHHHHHcCcHHHHHHHHH
Confidence 655555553310 01112233566666667764 66666554221 123444555666666666654
No 126
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=60.64 E-value=23 Score=35.82 Aligned_cols=31 Identities=3% Similarity=0.042 Sum_probs=13.3
Q ss_pred HHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHH
Q 037006 288 CARLLLANGARPDIRNARDGDTPLHITASLGYEQ 321 (541)
Q Consensus 288 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~ 321 (541)
+++.+.+.|..+|... -.+.+...+..|+.+
T Consensus 92 lf~~M~~~G~~Pd~~t---yn~lI~~~~~~g~~~ 122 (501)
T 4g26_A 92 IFKQMIVDKVVPNEAT---FTNGARLAVAKDDPE 122 (501)
T ss_dssp HHHHHHHTTCCCCHHH---HHHHHHHHHHHTCHH
T ss_pred HHHHHHHhCCCCCHHH---HHHHHHHHHhcCCHH
Confidence 4444445555444322 123334444555543
No 127
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=44.25 E-value=34 Score=34.61 Aligned_cols=103 Identities=9% Similarity=0.042 Sum_probs=52.7
Q ss_pred HHHHHHHHcCCCccccccCCCchhHHHHHcCCHHHHHHhhcCCchHHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHH
Q 037006 321 QMVKLLLQKGANKYIRNKSGKTAYDVAAECGHSRLFDALKLGDSLCVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHR 400 (541)
Q Consensus 321 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~ 400 (541)
++++.+.+.|..++... ..+.+...++.|..+... ++++.+.+.|..++... -.+.+..
T Consensus 91 ~lf~~M~~~G~~Pd~~t--yn~lI~~~~~~g~~~~A~-----------------~l~~~M~~~g~~Pd~~t--yn~lI~~ 149 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT--FTNGARLAVAKDDPEMAF-----------------DMVKQMKAFGIQPRLRS--YGPALFG 149 (501)
T ss_dssp HHHHHHHHTTCCCCHHH--HHHHHHHHHHHTCHHHHH-----------------HHHHHHHHTTCCCCHHH--HHHHHHH
T ss_pred HHHHHHHHhCCCCCHHH--HHHHHHHHHhcCCHHHHH-----------------HHHHHHHHcCCCCccce--ehHHHHH
Confidence 46666777787665432 123444555555554322 23555556676655332 1234445
Q ss_pred HHhcCCHHHHH----HHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHH
Q 037006 401 ASFKGKIEVVR----MLIDKGIDVDAKDEDGYTALHCAVESGHTDVTELL 446 (541)
Q Consensus 401 Aa~~g~~~~v~----~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~~~v~~L 446 (541)
.+..|..+-+. .+.+.|..++.... .+.+...++.|..+-+.-+
T Consensus 150 ~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty--~~Li~~~~~~g~~d~A~~l 197 (501)
T 4g26_A 150 FCRKGDADKAYEVDAHMVESEVVPEEPEL--AALLKVSMDTKNADKVYKT 197 (501)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCCHHHH--HHHHHHHhhCCCHHHHHHH
Confidence 56677765443 34455776654321 2344445566766544333
No 128
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=34.08 E-value=2.1e+02 Score=24.06 Aligned_cols=101 Identities=9% Similarity=0.082 Sum_probs=65.3
Q ss_pred HHHHhhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH-HHHH
Q 037006 366 CVAARKGEVRTMQRLIEAGAAINGKDLHGWTALHRASFKGKIEVVRMLIDKGIDVDAKDEDGYTALHCAVESGHT-DVTE 444 (541)
Q Consensus 366 ~~a~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~g~~-~~v~ 444 (541)
..|...|++++++....+--|+. ..+.+....|+.+-++.|-+. -....+-+.+++.+...|++ ++++
T Consensus 42 ~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~tg~~e~L~kla~i----A~~~g~~n~af~~~l~lGdv~~~i~ 110 (177)
T 3mkq_B 42 QEALAQGNASLAEMIYQTQHSFD-------KLSFLYLVTGDVNKLSKMQNI----AQTREDFGSMLLNTFYNNSTKERSS 110 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHHHTCHHHHHHHHHH----HHHTTCHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHHhCCHHHHHHHHHH----HHHCccHHHHHHHHHHcCCHHHHHH
Confidence 45677788888888777644432 344555556777777766542 11123335678888888876 5888
Q ss_pred HHHHCCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHh-CCCC
Q 037006 445 LLVKKGADVEARTSKNVSPMQIAECLHYAGISRILMH-GGAT 485 (541)
Q Consensus 445 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~-~ga~ 485 (541)
+|.+.|--. -+..+|..+|..++.+-+++ .|.+
T Consensus 111 lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~~~~~~ 144 (177)
T 3mkq_B 111 IFAEGGSLP--------LAYAVAKANGDEAAASAFLEQAEVD 144 (177)
T ss_dssp HHHHTTCHH--------HHHHHHHHTTCHHHHHHHHHHTTCC
T ss_pred HHHHCCChH--------HHHHHHHHcCcHHHHHHHHHHhCCc
Confidence 888765322 34667788898888888875 4443
No 129
>4h4n_A Hypothetical protein BA_2335; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.10A {Bacillus anthracis}
Probab=26.45 E-value=22 Score=23.16 Aligned_cols=23 Identities=35% Similarity=0.651 Sum_probs=16.0
Q ss_pred ecccccceeEEEeecCCcceeec
Q 037006 31 NVMHTMPVAFRIQPTNKARYTVK 53 (541)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~ 53 (541)
|.|...|+.|+|-|-++.+.+.-
T Consensus 2 namkk~pi~fkvppnsklkvtff 24 (67)
T 4h4n_A 2 NAMEKKPIAFKVPPNSKLKVTFF 24 (67)
T ss_dssp ----CCCEEEEECTTEEEEEEEE
T ss_pred CccccCceEEEcCCCCeeEEEEe
Confidence 67888999999999998886654
No 130
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=25.51 E-value=1.6e+02 Score=28.45 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=38.0
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 037006 248 LRGGHLEVLKLLLIKGANVNALTKDGNTALHLAVEDRRRDCARLLLANGARPDIRNARDGDTPLHITASLGYEQMVKLLL 327 (541)
Q Consensus 248 a~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 327 (541)
+..|+...|+..+..|-+++..- |.-..+. |+ +.+ .. ..|.|.+|+|++..+.+++..|+
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~l----t~~e~~l-----------ln-~~~--af--~~g~tlvhlair~~r~~~l~~ll 89 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQL----TADEVRL-----------LN-RPS--AF--DVGYTLVHLAIRFQRQDMLAILL 89 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCC----CHHHHHH-----------HC-CTT--TC--CTTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhccc----CHHHHHH-----------hC-CCc--cc--ccCchhhhhhhhhhhhhHHHHhh
Confidence 44677777777777766665421 2222211 11 111 11 35889999999999999998888
Q ss_pred H
Q 037006 328 Q 328 (541)
Q Consensus 328 ~ 328 (541)
.
T Consensus 90 ~ 90 (454)
T 3zrh_A 90 T 90 (454)
T ss_dssp H
T ss_pred h
Confidence 6
No 131
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=22.91 E-value=59 Score=19.49 Aligned_cols=16 Identities=13% Similarity=0.167 Sum_probs=10.0
Q ss_pred HHHHHHcCCHHHHHHH
Q 037006 177 LHIAIAQRRPDIVQLL 192 (541)
Q Consensus 177 L~~A~~~g~~~~v~~L 192 (541)
+..||..|+++.++.|
T Consensus 17 iyvA~seGd~etv~~L 32 (40)
T 1gp8_A 17 MDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHTTSCHHHHHHH
T ss_pred HHHHHhcCCHHHHHHH
Confidence 4466666666666665
No 132
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=20.91 E-value=2.4e+02 Score=25.34 Aligned_cols=58 Identities=19% Similarity=0.290 Sum_probs=43.1
Q ss_pred EEEEecCCCcccceEEEeecccccceeEEEeecC----------CcceeecCCCccccCCccceeeeeec
Q 037006 13 VAIRIEPGQKCSGELTLRNVMHTMPVAFRIQPTN----------KARYTVKPQSGIISPLATLSVEIAYH 72 (541)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~p~~~~~~p~~~~~~~~~~~ 72 (541)
.++.|..+++ ..+|+|+|-... |+..-.--.. ...|.+.||---+.|-....+++.+.
T Consensus 35 TRvIy~~~~k-~~sl~l~N~~~~-P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 35 TRVVFPASER-EVTLRVSNTSGT-PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp SEEEEETTCS-EEEEEEEECSSS-CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred eEEEEeCCCc-EEEEEEEeCCCC-eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 5677886666 689999996554 7776543211 23489999999999999999999863
Done!