Query 037007
Match_columns 152
No_of_seqs 171 out of 1168
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:37:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w2n_P Proprotein convertase s 99.7 8.6E-18 3E-22 120.8 4.7 78 26-113 36-113 (114)
2 3cnq_P Subtilisin BPN'; unclea 99.6 3E-15 1E-19 100.4 7.4 74 26-118 7-80 (80)
3 2p4e_P Proprotein convertase s 99.6 2.1E-15 7.4E-20 136.1 5.3 110 29-152 77-187 (692)
4 2qtw_A Proprotein convertase s 99.5 1E-14 3.4E-19 106.4 4.8 78 26-113 46-123 (124)
5 1v5i_B POIA1, IA-1=serine prot 99.4 3.8E-13 1.3E-17 89.9 6.2 71 27-113 2-75 (76)
6 3afg_A Subtilisin-like serine 99.1 3.2E-10 1.1E-14 99.6 8.0 77 71-152 60-148 (539)
7 2z2z_A TK-subtilisin precursor 99.0 2.3E-10 7.7E-15 96.5 5.4 77 71-152 24-113 (395)
8 3t41_A Epidermin leader peptid 99.0 1.4E-09 4.8E-14 93.1 9.2 79 71-152 66-155 (471)
9 1r6v_A Subtilisin-like serine 97.8 2.8E-05 9.6E-10 70.1 6.3 76 72-152 54-163 (671)
10 2z30_B TK-subtilisin; thermoco 97.7 1.9E-05 6.6E-10 50.6 2.4 41 71-112 23-63 (65)
11 2oxa_A Extracellular serine pr 93.6 0.0065 2.2E-07 53.5 -1.8 20 133-152 60-79 (600)
12 2iy9_A SUBA; toxin, shiga, pla 77.6 0.27 9.1E-06 39.9 -1.4 27 122-152 25-53 (347)
13 3hjr_A Extracellular serine pr 77.4 0.75 2.6E-05 40.0 1.3 20 133-152 60-79 (600)
14 2id4_A Kexin; KEX2, kexin, fur 73.8 1.1 3.8E-05 38.4 1.4 20 133-152 44-63 (503)
15 2jg6_A DNA-3-methyladenine gly 44.5 7 0.00024 29.7 1.0 31 74-104 53-87 (186)
16 2ofk_A 3-methyladenine DNA gly 44.3 6.2 0.00021 29.9 0.7 31 74-104 53-87 (183)
17 3ftj_A MACB, macrolide export 43.3 18 0.0006 26.5 3.1 24 85-108 32-55 (226)
18 1gks_A Cytochrome C551; haloph 27.0 34 0.0011 20.8 2.0 19 79-97 53-71 (78)
19 1c53_A Cytochrome C553; electr 22.3 27 0.00093 21.2 0.8 21 78-98 54-74 (79)
20 1w2l_A Cytochrome oxidase subu 21.4 49 0.0017 20.5 2.0 21 77-97 72-92 (99)
No 1
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.70 E-value=8.6e-18 Score=120.82 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=65.3
Q ss_pred CCceEEEEeCCCCCCCCCccchhhhhhHHHHHHHHhhhCCCCCCccceeeeeccccccccccCCHHHHHHHhCCCCEEEE
Q 037007 26 AKQSYVVYLGAHSHGPELSSVDLKRATQSHYEFLGSYLGSNENPEEAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVLSV 105 (152)
Q Consensus 26 ~~~~YIV~m~~~~~~~~~~~~~~~~~~~~H~~~l~s~~~~~~~~~~~i~~sy~~~~~GFaa~lt~~e~~~L~~~p~V~~V 105 (152)
.+++|||+|++... ......|++|+.+++.+. ....++.|+|+++||||+|+|+++++++|+++|+|.+|
T Consensus 36 ip~~YIV~lk~~~~---------~~~~~~h~~~l~s~~~~~-~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~V 105 (114)
T 2w2n_P 36 LPGTYVVVLKEETH---------LSQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 105 (114)
T ss_dssp EEEEEEEEECTTCC---------HHHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCcEEEEECCCCC---------HHHHHHHHHHHHHHhhhc-ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEE
Confidence 46799999996532 345668999999987652 22357999999999999999999999999999999999
Q ss_pred EcCCCccc
Q 037007 106 FLSKEKKL 113 (152)
Q Consensus 106 ~~d~~~~l 113 (152)
|||+.+++
T Consensus 106 E~D~~v~~ 113 (114)
T 2w2n_P 106 EEDSSVFA 113 (114)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99998764
No 2
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=99.59 E-value=3e-15 Score=100.40 Aligned_cols=74 Identities=16% Similarity=0.211 Sum_probs=56.8
Q ss_pred CCceEEEEeCCCCCCCCCccchhhhhhHHHHHHHHhhhCCCCCCccceeeeeccccccccccCCHHHHHHHhCCCCEEEE
Q 037007 26 AKQSYVVYLGAHSHGPELSSVDLKRATQSHYEFLGSYLGSNENPEEAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVLSV 105 (152)
Q Consensus 26 ~~~~YIV~m~~~~~~~~~~~~~~~~~~~~H~~~l~s~~~~~~~~~~~i~~sy~~~~~GFaa~lt~~e~~~L~~~p~V~~V 105 (152)
-++.|||.+++.... . . .|.+++.. ...++.|+|++ ||||+++|+++++++|+++|+|.+|
T Consensus 7 i~~~YIV~~k~~~~~--------~-~--~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~V 67 (80)
T 3cnq_P 7 GEKKYIVGFKQGFKS--------C-A--KKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYV 67 (80)
T ss_dssp -CCEEEEEECTTCCS--------H-H--HHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEE
T ss_pred CCCCEEEEECCCCCh--------H-H--HHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEE
Confidence 578999999975431 1 1 13333321 12479999998 9999999999999999999999999
Q ss_pred EcCCCcccccccc
Q 037007 106 FLSKEKKLHTTHS 118 (152)
Q Consensus 106 ~~d~~~~l~tt~s 118 (152)
|||+.++++||++
T Consensus 68 e~D~~v~~~tt~~ 80 (80)
T 3cnq_P 68 EEDKLYRALSATS 80 (80)
T ss_dssp EECCEEEECCC--
T ss_pred EeCcEEEEeeecC
Confidence 9999999998764
No 3
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=99.55 E-value=2.1e-15 Score=136.06 Aligned_cols=110 Identities=15% Similarity=0.121 Sum_probs=58.3
Q ss_pred eEEEEeCCCCCCCCCccchhhhhhHHHHHHHHhhhCCCCCCccceeeeeccccccccccCCHHHHHHHhCCCCEEEEEcC
Q 037007 29 SYVVYLGAHSHGPELSSVDLKRATQSHYEFLGSYLGSNENPEEAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVLSVFLS 108 (152)
Q Consensus 29 ~YIV~m~~~~~~~~~~~~~~~~~~~~H~~~l~s~~~~~~~~~~~i~~sy~~~~~GFaa~lt~~e~~~L~~~p~V~~V~~d 108 (152)
.|||.+++... ......|.+++........ ...++.++|++.|+||+++|+++++++|+++|+|.+||||
T Consensus 77 ~YIV~lk~~~~---------~~~~~~~~~~l~a~~~~~g-~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd 146 (692)
T 2p4e_P 77 TYVVVLKEETH---------LSQSERTARRLQAQAARRG-YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEED 146 (692)
T ss_dssp EEEEEECTTCC---------HHHHHHHHHHHHHHHHHTT-CCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEE
T ss_pred cEEEEECCCCC---------HHHHHHHHHHHHHHHhhcc-cccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEec
Confidence 89999997543 2345556666655432111 1246899999999999999999999999999999999999
Q ss_pred CCccccccccCCccCcCCCCCCC-CCCccccCCCCCCcEEEEecC
Q 037007 109 KEKKLHTTHSWEFLGLEQNGRIP-PNSIWEKARYGEDAIIGNIDS 152 (152)
Q Consensus 109 ~~~~l~tt~s~~flGl~~~~~~~-~~~~~~~~~~G~gviVgViDT 152 (152)
+.+... ... |||.+++... ....|.....|+||+||||||
T Consensus 147 ~~v~~~-~~p---WgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDT 187 (692)
T 2p4e_P 147 SSVFAQ-SIP---WNLERITPPRYRADEYQPPDGGSLVEVYLLDT 187 (692)
T ss_dssp EEEEEC---------------------------------------
T ss_pred cccccC-CCC---cchhhcccccccccccccCCCCCCcEEEEEcC
Confidence 987542 122 5888775321 123576677899999999997
No 4
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=99.51 E-value=1e-14 Score=106.38 Aligned_cols=78 Identities=17% Similarity=0.139 Sum_probs=61.3
Q ss_pred CCceEEEEeCCCCCCCCCccchhhhhhHHHHHHHHhhhCCCCCCccceeeeeccccccccccCCHHHHHHHhCCCCEEEE
Q 037007 26 AKQSYVVYLGAHSHGPELSSVDLKRATQSHYEFLGSYLGSNENPEEAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVLSV 105 (152)
Q Consensus 26 ~~~~YIV~m~~~~~~~~~~~~~~~~~~~~H~~~l~s~~~~~~~~~~~i~~sy~~~~~GFaa~lt~~e~~~L~~~p~V~~V 105 (152)
-+++|||.|++... ......|.+|+.+...... ...++.|+|++.||||+++|+++++++|+++|+|.+|
T Consensus 46 Ip~~YIV~~K~~~~---------~~~~~~~~~~l~~~~~~r~-~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~V 115 (124)
T 2qtw_A 46 LPGTYVVVLKEETH---------LSQSERTARRLQAQAARRG-YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 115 (124)
T ss_dssp EEEEEEEEECTTCC---------HHHHHHHHHHHHHHHHHTT-CCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCCEEEEECCCCC---------HHHHHHHHHHHHHHHhhcc-cCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEE
Confidence 36799999997543 3356677777776432211 1247999999999999999999999999999999999
Q ss_pred EcCCCccc
Q 037007 106 FLSKEKKL 113 (152)
Q Consensus 106 ~~d~~~~l 113 (152)
|||+.++.
T Consensus 116 E~D~~v~a 123 (124)
T 2qtw_A 116 EEDSSVFA 123 (124)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99998764
No 5
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=99.40 E-value=3.8e-13 Score=89.87 Aligned_cols=71 Identities=11% Similarity=0.095 Sum_probs=59.2
Q ss_pred CceEEEEeCCCCCCCCCccchhhhhhHHHHHHHHhhhCCCCCCccceeeeec-cccccccccCCHHHHHHHhCC--CCEE
Q 037007 27 KQSYVVYLGAHSHGPELSSVDLKRATQSHYEFLGSYLGSNENPEEAIFYSYT-RHINGFAAKLDDAVAAEIAKH--PKVL 103 (152)
Q Consensus 27 ~~~YIV~m~~~~~~~~~~~~~~~~~~~~H~~~l~s~~~~~~~~~~~i~~sy~-~~~~GFaa~lt~~e~~~L~~~--p~V~ 103 (152)
.+.|||.|++... ......|.+|+...- .++.+.|+ ..||||+++|+++++++|+++ |.|.
T Consensus 2 ~~sYIV~lk~~~~---------~~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~ 65 (76)
T 1v5i_B 2 AGKFIVIFKNDVS---------EDKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLID 65 (76)
T ss_dssp CEEEEEEECTTCC---------HHHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEE
T ss_pred CceEEEEECCCCC---------HHHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCc
Confidence 4789999997543 346678888887641 35899995 899999999999999999999 8899
Q ss_pred EEEcCCCccc
Q 037007 104 SVFLSKEKKL 113 (152)
Q Consensus 104 ~V~~d~~~~l 113 (152)
+||+|+.+++
T Consensus 66 ~VE~D~~v~~ 75 (76)
T 1v5i_B 66 SIEEDHVAHA 75 (76)
T ss_dssp EEEECCEEEC
T ss_pred EEcCCcEEeC
Confidence 9999998764
No 6
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=99.05 E-value=3.2e-10 Score=99.62 Aligned_cols=77 Identities=23% Similarity=0.299 Sum_probs=57.6
Q ss_pred cceeeeeccccccccccCCHHHHHHH-----------hCCCCEEEEEcCCCccccccccCCccCcCCCC-CCCCCCcccc
Q 037007 71 EAIFYSYTRHINGFAAKLDDAVAAEI-----------AKHPKVLSVFLSKEKKLHTTHSWEFLGLEQNG-RIPPNSIWEK 138 (152)
Q Consensus 71 ~~i~~sy~~~~~GFaa~lt~~e~~~L-----------~~~p~V~~V~~d~~~~l~tt~s~~flGl~~~~-~~~~~~~~~~ 138 (152)
.++.|+|+ .|+||+++|+++++++| +++|+|.+|+||..+++... ++|+++.. ..+....|..
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 134 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVE----TEGLDESAAQVMATNMWNL 134 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC---------------CCBCSCCBCC
T ss_pred CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCc----cccCCccccccCcHhHHhc
Confidence 36889996 79999999999999999 89999999999998877432 23443211 1123467887
Q ss_pred CCCCCCcEEEEecC
Q 037007 139 ARYGEDAIIGNIDS 152 (152)
Q Consensus 139 ~~~G~gviVgViDT 152 (152)
...|+||+||||||
T Consensus 135 g~~G~gv~VaViDt 148 (539)
T 3afg_A 135 GYDGSGITIGIIDT 148 (539)
T ss_dssp SCCCTTCEEEEEES
T ss_pred CCCCCCcEEEEEec
Confidence 78899999999997
No 7
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=99.01 E-value=2.3e-10 Score=96.54 Aligned_cols=77 Identities=21% Similarity=0.352 Sum_probs=61.7
Q ss_pred cceeeeeccccccccccCCHHHHHHHhCCCCEEEEEcCCCccccccccC-----------CccCcCCCCCCCCCCccccC
Q 037007 71 EAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVLSVFLSKEKKLHTTHSW-----------EFLGLEQNGRIPPNSIWEKA 139 (152)
Q Consensus 71 ~~i~~sy~~~~~GFaa~lt~~e~~~L~~~p~V~~V~~d~~~~l~tt~s~-----------~flGl~~~~~~~~~~~~~~~ 139 (152)
.++++.|+ .++||+++++++++++|+++|+|.+|+||..++++.+..| .-||+.+++ ....|...
T Consensus 24 ~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~---~~~~w~~~ 99 (395)
T 2z2z_A 24 GHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVK---APSVWSIT 99 (395)
T ss_dssp CEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTT---CGGGGGTC
T ss_pred CEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcC---HHHHHhhc
Confidence 46889997 4999999999999999999999999999999987644322 224555442 23578776
Q ss_pred CCCCC--cEEEEecC
Q 037007 140 RYGED--AIIGNIDS 152 (152)
Q Consensus 140 ~~G~g--viVgViDT 152 (152)
.|+| |+||||||
T Consensus 100 -~G~g~~v~VaViDt 113 (395)
T 2z2z_A 100 -DGSVSVIQVAVLDT 113 (395)
T ss_dssp -SSCCTTCEEEEEES
T ss_pred -CCCCCcEEEEEEcC
Confidence 8999 99999997
No 8
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=98.98 E-value=1.4e-09 Score=93.12 Aligned_cols=79 Identities=9% Similarity=0.122 Sum_probs=62.5
Q ss_pred cceeeeeccccccccccCCHHHHHHHhC-CCCEEEEEcCCCccccccccC----------CccCcCCCCCCCCCCccccC
Q 037007 71 EAIFYSYTRHINGFAAKLDDAVAAEIAK-HPKVLSVFLSKEKKLHTTHSW----------EFLGLEQNGRIPPNSIWEKA 139 (152)
Q Consensus 71 ~~i~~sy~~~~~GFaa~lt~~e~~~L~~-~p~V~~V~~d~~~~l~tt~s~----------~flGl~~~~~~~~~~~~~~~ 139 (152)
.++++.|. .|+||+++++++++++|++ +|+|.+|+|++.++++++.+. .-|++.++.. ....|...
T Consensus 66 ~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~--~~~~~~~~ 142 (471)
T 3t41_A 66 LNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITN--NGASYDDL 142 (471)
T ss_dssp CEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT--TTGGGGGC
T ss_pred CEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccC--cHHHHhcc
Confidence 35788884 5999999999999999999 999999999999988754321 1245665532 12578877
Q ss_pred CCCCCcEEEEecC
Q 037007 140 RYGEDAIIGNIDS 152 (152)
Q Consensus 140 ~~G~gviVgViDT 152 (152)
..|+||+||||||
T Consensus 143 ~~G~gv~VaViDt 155 (471)
T 3t41_A 143 PKHANTKIAIIDT 155 (471)
T ss_dssp CSSCCCCEEEEES
T ss_pred CCCCCcEEEEEeC
Confidence 7899999999997
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=97.79 E-value=2.8e-05 Score=70.10 Aligned_cols=76 Identities=24% Similarity=0.317 Sum_probs=51.2
Q ss_pred ceeeeeccccccccccCCH---HH-HHHHh--CCCCEEEEEcCCCccccc-cc---c-----------------------
Q 037007 72 AIFYSYTRHINGFAAKLDD---AV-AAEIA--KHPKVLSVFLSKEKKLHT-TH---S----------------------- 118 (152)
Q Consensus 72 ~i~~sy~~~~~GFaa~lt~---~e-~~~L~--~~p~V~~V~~d~~~~l~t-t~---s----------------------- 118 (152)
++.+.+. .++++++++++ ++ +++|+ +.|+|.+||||..+++.+ +. .
T Consensus 54 ~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (671)
T 1r6v_A 54 KVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELS 132 (671)
T ss_dssp EEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTG
T ss_pred eEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccccc
Confidence 4677774 68999998865 33 46676 489999999998776541 00 0
Q ss_pred CCccCcCCCCCCCCCCc-cccCCCCCCcEEEEecC
Q 037007 119 WEFLGLEQNGRIPPNSI-WEKARYGEDAIIGNIDS 152 (152)
Q Consensus 119 ~~flGl~~~~~~~~~~~-~~~~~~G~gviVgViDT 152 (152)
..-||+.+++ .... |.. ..|+||+|+||||
T Consensus 133 ~~~W~l~~I~---~~~a~w~~-~tG~gV~VAVIDT 163 (671)
T 1r6v_A 133 NELWGLEAIG---VTQQLWEE-ASGTNIIVAVVDT 163 (671)
T ss_dssp GGCHHHHHTT---CCHHHHHH-CSCTTCEEEEEES
T ss_pred ccCCchhccC---Cchhhhhc-cCCCCCEEEEEeC
Confidence 0124554432 2344 776 6799999999997
No 10
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.67 E-value=1.9e-05 Score=50.60 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=37.6
Q ss_pred cceeeeeccccccccccCCHHHHHHHhCCCCEEEEEcCCCcc
Q 037007 71 EAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVLSVFLSKEKK 112 (152)
Q Consensus 71 ~~i~~sy~~~~~GFaa~lt~~e~~~L~~~p~V~~V~~d~~~~ 112 (152)
.++.|.|. .++++++.|+++.+++|+++|+|.+||+|..++
T Consensus 23 G~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 23 GHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp CEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred CEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 56899995 699999999999999999999999999998764
No 11
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=93.65 E-value=0.0065 Score=53.49 Aligned_cols=20 Identities=10% Similarity=0.079 Sum_probs=17.4
Q ss_pred CCccccCCCCCCcEEEEecC
Q 037007 133 NSIWEKARYGEDAIIGNIDS 152 (152)
Q Consensus 133 ~~~~~~~~~G~gviVgViDT 152 (152)
...|.....|+||+||||||
T Consensus 60 ~~aw~~g~~G~gV~VaViDt 79 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDD 79 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESS
T ss_pred HHHHhcCCCCCCcEEEEecC
Confidence 45788778899999999997
No 12
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=77.58 E-value=0.27 Score=39.90 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=20.1
Q ss_pred cCcCCCCCCCCCCccccCCCCC--CcEEEEecC
Q 037007 122 LGLEQNGRIPPNSIWEKARYGE--DAIIGNIDS 152 (152)
Q Consensus 122 lGl~~~~~~~~~~~~~~~~~G~--gviVgViDT 152 (152)
|+|++++ ....|.. ..|+ ||+|+||||
T Consensus 25 W~l~~i~---~~~aw~~-~~G~~~gv~VaViDs 53 (347)
T 2iy9_A 25 WYFDAIG---LTETTMS-LTDKNTPVVVSVVDS 53 (347)
T ss_dssp HHHHHHT---CCHHHHH-TSCTTSCCEEEEEES
T ss_pred cchhhCC---hHHHHHH-hcCCCCCCEEEEEcC
Confidence 4666543 2357876 6799 999999997
No 13
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=77.41 E-value=0.75 Score=39.96 Aligned_cols=20 Identities=10% Similarity=0.101 Sum_probs=17.2
Q ss_pred CCccccCCCCCCcEEEEecC
Q 037007 133 NSIWEKARYGEDAIIGNIDS 152 (152)
Q Consensus 133 ~~~~~~~~~G~gviVgViDT 152 (152)
...|.....|+||+|+||||
T Consensus 60 ~~aw~~g~tG~GV~VaViDt 79 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDD 79 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESS
T ss_pred HHHHHcCCCCCCeEEEEEcC
Confidence 35788778899999999997
No 14
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=73.82 E-value=1.1 Score=38.35 Aligned_cols=20 Identities=15% Similarity=0.386 Sum_probs=17.6
Q ss_pred CCccccCCCCCCcEEEEecC
Q 037007 133 NSIWEKARYGEDAIIGNIDS 152 (152)
Q Consensus 133 ~~~~~~~~~G~gviVgViDT 152 (152)
...|.....|+||+|+||||
T Consensus 44 ~~aw~~g~tG~gv~VaViDt 63 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDD 63 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEES
T ss_pred HHHHhcCCCCCCeEEEEEeC
Confidence 46888878899999999997
No 15
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A
Probab=44.49 E-value=7 Score=29.69 Aligned_cols=31 Identities=13% Similarity=0.292 Sum_probs=27.3
Q ss_pred eeeeccccccc----cccCCHHHHHHHhCCCCEEE
Q 037007 74 FYSYTRHINGF----AAKLDDAVAAEIAKHPKVLS 104 (152)
Q Consensus 74 ~~sy~~~~~GF----aa~lt~~e~~~L~~~p~V~~ 104 (152)
...|..+|.|| -|.++++++++|...|+++.
T Consensus 53 Re~fR~AF~~FD~~~VA~~~e~dve~Ll~d~gIIR 87 (186)
T 2jg6_A 53 KEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVH 87 (186)
T ss_dssp HHHHHHHTGGGCHHHHTTCCHHHHHHHTTCTTSCC
T ss_pred HHHHHHHHcCCCHHHHhCCCHHHHHHHhcCccchh
Confidence 55688999999 47999999999999999974
No 16
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=44.27 E-value=6.2 Score=29.88 Aligned_cols=31 Identities=10% Similarity=0.255 Sum_probs=27.1
Q ss_pred eeeecccccccc----ccCCHHHHHHHhCCCCEEE
Q 037007 74 FYSYTRHINGFA----AKLDDAVAAEIAKHPKVLS 104 (152)
Q Consensus 74 ~~sy~~~~~GFa----a~lt~~e~~~L~~~p~V~~ 104 (152)
...|..+|.||- |.++++++++|...|+++.
T Consensus 53 Re~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~IIR 87 (183)
T 2ofk_A 53 RENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIR 87 (183)
T ss_dssp HHHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSCC
T ss_pred HHHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcchh
Confidence 456889999994 6999999999999999974
No 17
>3ftj_A MACB, macrolide export ATP-binding/permease protein MACB; macrolide-specific pump, ABC-type transporter; 2.00A {Actinobacillus actinomycetemcomitans}
Probab=43.33 E-value=18 Score=26.45 Aligned_cols=24 Identities=21% Similarity=0.152 Sum_probs=21.4
Q ss_pred cccCCHHHHHHHhCCCCEEEEEcC
Q 037007 85 AAKLDDAVAAEIAKHPKVLSVFLS 108 (152)
Q Consensus 85 aa~lt~~e~~~L~~~p~V~~V~~d 108 (152)
...|+++++++|++.|+|..|.|.
T Consensus 32 ~~~lt~~d~~~l~~~p~V~~v~~~ 55 (226)
T 3ftj_A 32 IQNLKISDANTLSKQSYIQSVTPN 55 (226)
T ss_dssp SCCCBHHHHHHHHTSTTEEEEEEE
T ss_pred cCCCCHHHHHHHhcCCCceEEEEE
Confidence 457999999999999999999874
No 18
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=26.97 E-value=34 Score=20.84 Aligned_cols=19 Identities=5% Similarity=0.127 Sum_probs=16.3
Q ss_pred cccccccccCCHHHHHHHh
Q 037007 79 RHINGFAAKLDDAVAAEIA 97 (152)
Q Consensus 79 ~~~~GFaa~lt~~e~~~L~ 97 (152)
..+..|+..|+++|++.|.
T Consensus 53 ~~Mp~~~~~Lsd~ei~~l~ 71 (78)
T 1gks_A 53 GAMPAYDGRADREDLVKAI 71 (78)
T ss_dssp TTBCCCBTTBCHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHH
Confidence 4688898899999999885
No 19
>1c53_A Cytochrome C553; electron transport; HET: HEM; 1.80A {Desulfovibrio vulgaris str} SCOP: a.3.1.1 PDB: 1dvh_A* 1dwl_B* 1e08_E* 2dvh_A*
Probab=22.27 E-value=27 Score=21.20 Aligned_cols=21 Identities=10% Similarity=0.207 Sum_probs=17.4
Q ss_pred ccccccccccCCHHHHHHHhC
Q 037007 78 TRHINGFAAKLDDAVAAEIAK 98 (152)
Q Consensus 78 ~~~~~GFaa~lt~~e~~~L~~ 98 (152)
...+..|+..|+++|++.|..
T Consensus 54 ~~~Mp~~~~~Ls~~ei~~l~~ 74 (79)
T 1c53_A 54 KAVMTNLVKRYSDEEMKAMAD 74 (79)
T ss_pred ccchHHHHhhCCHHHHHHHHH
Confidence 457888988999999998853
No 20
>1w2l_A Cytochrome oxidase subunit II; cytochrome C domain, oxidoreductase; HET: HEM; 1.3A {Rhodothermus marinus}
Probab=21.38 E-value=49 Score=20.53 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=17.3
Q ss_pred eccccccccccCCHHHHHHHh
Q 037007 77 YTRHINGFAAKLDDAVAAEIA 97 (152)
Q Consensus 77 y~~~~~GFaa~lt~~e~~~L~ 97 (152)
|...+..|...|+++|++.|.
T Consensus 72 ~~~~Mp~~~~~ls~~ei~~l~ 92 (99)
T 1w2l_A 72 YPNVMPASYASLSEREVAALI 92 (99)
T ss_dssp SCSCCCGGGGGCCHHHHHHHH
T ss_pred ccccCccccccCCHHHHHHHH
Confidence 455788888899999998875
Done!